Miyakogusa Predicted Gene

Lj0g3v0312839.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0312839.1 Non Chatacterized Hit- tr|K4CMS6|K4CMS6_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,47.83,2e-17,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.21114.1
         (98 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G47580.1 | Symbols:  | Leucine-rich repeat protein kinase fam...    55   8e-09
AT3G47110.1 | Symbols:  | Leucine-rich repeat protein kinase fam...    53   5e-08
AT3G47090.1 | Symbols:  | Leucine-rich repeat protein kinase fam...    53   5e-08
AT3G47570.1 | Symbols:  | Leucine-rich repeat protein kinase fam...    53   5e-08

>AT3G47580.1 | Symbols:  | Leucine-rich repeat protein kinase family
            protein | chr3:17532687-17535810 FORWARD LENGTH=1011
          Length = 1011

 Score = 55.5 bits (132), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 25/92 (27%), Positives = 52/92 (56%)

Query: 1    MLMELFTTKRPTDQMFVGGISLRSWIQESMPNKIIQVIDPNLMEGEEQFISAKEAAISNI 60
            +L+E+FT KRPTD++F G ++L S+ + ++P K+ ++ D  ++    +        ++ +
Sbjct: 911  LLLEMFTGKRPTDELFGGNLTLHSYTKLALPEKVFEIADKAILHIGLRVGFRTAECLTLV 970

Query: 61   MLLALNCSADSLDERMSMDEVLRRLIKIKTTF 92
            + + L C  +    R++  EV + LI I+  F
Sbjct: 971  LEVGLRCCEEYPTNRLATSEVAKELISIRERF 1002


>AT3G47110.1 | Symbols:  | Leucine-rich repeat protein kinase family
            protein | chr3:17347103-17350296 REVERSE LENGTH=1025
          Length = 1025

 Score = 52.8 bits (125), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/94 (28%), Positives = 58/94 (61%), Gaps = 3/94 (3%)

Query: 1    MLMELFTTKRPTDQMFVGGISLRSWIQESMPNK-IIQVIDPNLMEGE-EQFISAKEAAIS 58
            +L+E+FT KRPT+++FV G++L S+ + ++  +  + + D  ++ G   Q  +  E  ++
Sbjct: 927  VLLEIFTGKRPTNKLFVDGLTLHSFTKSALQKRQALDITDETILRGAYAQHFNMVE-CLT 985

Query: 59   NIMLLALNCSADSLDERMSMDEVLRRLIKIKTTF 92
             +  + ++CS +S   R+SM E + +L+ I+ +F
Sbjct: 986  LVFRVGVSCSEESPVNRISMAEAISKLVSIRESF 1019


>AT3G47090.1 | Symbols:  | Leucine-rich repeat protein kinase family
            protein | chr3:17341512-17344645 REVERSE LENGTH=1009
          Length = 1009

 Score = 52.8 bits (125), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 23/92 (25%), Positives = 51/92 (55%)

Query: 1    MLMELFTTKRPTDQMFVGGISLRSWIQESMPNKIIQVIDPNLMEGEEQFISAKEAAISNI 60
            +++E+FT KRPT+++F G  +L S+ + ++P +++ + D +++    +        +  I
Sbjct: 909  LVLEMFTGKRPTNELFGGNFTLNSYTKAALPERVLDIADKSILHSGLRVGFPVLECLKGI 968

Query: 61   MLLALNCSADSLDERMSMDEVLRRLIKIKTTF 92
            + + L C  +S   R++  E  + LI I+  F
Sbjct: 969  LDVGLRCCEESPLNRLATSEAAKELISIRERF 1000


>AT3G47570.1 | Symbols:  | Leucine-rich repeat protein kinase family
            protein | chr3:17527611-17530748 FORWARD LENGTH=1010
          Length = 1010

 Score = 52.8 bits (125), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 24/92 (26%), Positives = 53/92 (57%)

Query: 1    MLMELFTTKRPTDQMFVGGISLRSWIQESMPNKIIQVIDPNLMEGEEQFISAKEAAISNI 60
            +L+E+FT KRPT+++F G  +L S+ + ++P +I+ ++D +++    +        ++ +
Sbjct: 910  LLLEMFTGKRPTNELFGGNFTLNSYTKSALPERILDIVDESILHIGLRVGFPVVECLTMV 969

Query: 61   MLLALNCSADSLDERMSMDEVLRRLIKIKTTF 92
              + L C  +S   R++   V++ LI I+  F
Sbjct: 970  FEVGLRCCEESPMNRLATSIVVKELISIRERF 1001