Miyakogusa Predicted Gene

Lj0g3v0312149.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0312149.1 tr|I1JBA7|I1JBA7_SOYBN Protein translocase
subunit SecA OS=Glycine max GN=secA PE=3 SV=1,90,0,seg,NULL; SECA
INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM,NULL; P-loop
containing nucl,CUFF.21068.1
         (441 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G01800.1 | Symbols: AGY1, AtcpSecA, SECA1 | Albino or Glassy ...   778   0.0  
AT4G01800.2 | Symbols: AGY1, SECA1 | Albino or Glassy Yellow 1 |...   760   0.0  
AT1G21650.2 | Symbols: SECA2 | Preprotein translocase SecA famil...   318   5e-87
AT1G21650.1 | Symbols: SECA2 | Preprotein translocase SecA famil...   318   5e-87
AT1G21650.3 | Symbols: SECA2 | Preprotein translocase SecA famil...   317   9e-87

>AT4G01800.1 | Symbols: AGY1, AtcpSecA, SECA1 | Albino or Glassy
           Yellow 1 | chr4:770926-776131 REVERSE LENGTH=1022
          Length = 1022

 Score =  778 bits (2009), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/460 (82%), Positives = 401/460 (87%), Gaps = 19/460 (4%)

Query: 1   MQGRRWSDGLHQAVEAKEGLPIQNETVTLASISYQNFFLQFPKLCGMTGTAATESTEFES 60
           MQGRRWSDGLHQAVEAKEGLPIQNE++TLASISYQNFFLQFPKLCGMTGTA+TES EFES
Sbjct: 399 MQGRRWSDGLHQAVEAKEGLPIQNESITLASISYQNFFLQFPKLCGMTGTASTESAEFES 458

Query: 61  IYKLKVTIVPTNKPMIRKDDSDVVFRATTGKWRAVVVEISRMHKTGRPVLVGTTSVEQSD 120
           IYKLKVTIVPTNKPMIRKD+SDVVF+A  GKWRAVVVEISRMHKTGR VLVGTTSVEQSD
Sbjct: 459 IYKLKVTIVPTNKPMIRKDESDVVFKAVNGKWRAVVVEISRMHKTGRAVLVGTTSVEQSD 518

Query: 121 SLSEQLKEVGIPHEVLNAKPENVEREAEIVTQSGRLGAVTIATNMAGRGTDIILGGNAEF 180
            LS+ L+E GI HEVLNAKPENVEREAEIV QSGRLGAVTIATNMAGRGTDIILGGNAEF
Sbjct: 519 ELSQLLREAGITHEVLNAKPENVEREAEIVAQSGRLGAVTIATNMAGRGTDIILGGNAEF 578

Query: 181 MARLKLREILMPRVVKPAEGEFVSVKKPPPSKIWKVNEKLFPCQLSKINXXXXXXXXXXX 240
           MARLKLREILMPRVVKP +G FVSVKK PP + WKVNEKLFPC+LS              
Sbjct: 579 MARLKLREILMPRVVKPTDGVFVSVKKAPPKRTWKVNEKLFPCKLSNEKAKLAEEAVQSA 638

Query: 241 XXTWGKRSLTELEAEERLSYSCEKGPAQDEVIAELRNAFLEISKEYKVFTEEERKKVVAA 300
              WG++SLTELEAEERLSYSCEKGP QDEVI +LR AFL I+KEYK +T+EERKKVV A
Sbjct: 639 VEAWGQKSLTELEAEERLSYSCEKGPVQDEVIGKLRTAFLAIAKEYKGYTDEERKKVVEA 698

Query: 301 GGLHVVGTERHESRRIDNQLRGRSGRQGDPGSSRFFLSLEDNIFRIFGGDRIQGLMRAFR 360
           GGLHVVGTERHESRRIDNQLRGRSGRQGDPGSSRFFLSLEDNIFRIFGGDRIQG+MRAFR
Sbjct: 699 GGLHVVGTERHESRRIDNQLRGRSGRQGDPGSSRFFLSLEDNIFRIFGGDRIQGMMRAFR 758

Query: 361 VEDLPIESKMLTKALDEAQRKVENYFFDIRKQLFEFDEVLNSQ----------------- 403
           VEDLPIESKMLTKALDEAQRKVENYFFDIRKQLFEFDEVLNSQ                 
Sbjct: 759 VEDLPIESKMLTKALDEAQRKVENYFFDIRKQLFEFDEVLNSQRDRVYTERRRALVSDSL 818

Query: 404 --ILIEYAELTMDDILEANIGSDSTKDSWDLEKLIAKIQQ 441
             ++IEYAELTMDDILEANIG D+ K+SWD EKLIAK+QQ
Sbjct: 819 EPLIIEYAELTMDDILEANIGPDTPKESWDFEKLIAKVQQ 858


>AT4G01800.2 | Symbols: AGY1, SECA1 | Albino or Glassy Yellow 1 |
           chr4:770926-776134 REVERSE LENGTH=1042
          Length = 1042

 Score =  760 bits (1962), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/496 (76%), Positives = 401/496 (80%), Gaps = 55/496 (11%)

Query: 1   MQGRRWSDGLHQAVEAKEGLPIQNETVTLASISYQNFFLQFPKLCGMTGTAATESTEFES 60
           MQGRRWSDGLHQAVEAKEGLPIQNE++TLASISYQNFFLQFPKLCGMTGTA+TES EFES
Sbjct: 383 MQGRRWSDGLHQAVEAKEGLPIQNESITLASISYQNFFLQFPKLCGMTGTASTESAEFES 442

Query: 61  IYKLKVTIVPTNKPMIRK------------------------------------DDSDVV 84
           IYKLKVTIVPTNKPMIRK                                    D+SDVV
Sbjct: 443 IYKLKVTIVPTNKPMIRKVCLLSYALNLYLKIQTVGLHNCSPSEDLKFVYVGLLDESDVV 502

Query: 85  FRATTGKWRAVVVEISRMHKTGRPVLVGTTSVEQSDSLSEQLKEVGIPHEVLNAKPENVE 144
           F+A  GKWRAVVVEISRMHKTGR VLVGTTSVEQSD LS+ L+E GI HEVLNAKPENVE
Sbjct: 503 FKAVNGKWRAVVVEISRMHKTGRAVLVGTTSVEQSDELSQLLREAGITHEVLNAKPENVE 562

Query: 145 REAEIVTQSGRLGAVTIATNMAGRGTDIILGGNAEFMARLKLREILMPRVVKPAEGEFVS 204
           REAEIV QSGRLGAVTIATNMAGRGTDIILGGNAEFMARLKLREILMPRVVKP +G FVS
Sbjct: 563 REAEIVAQSGRLGAVTIATNMAGRGTDIILGGNAEFMARLKLREILMPRVVKPTDGVFVS 622

Query: 205 VKKPPPSKIWKVNEKLFPCQLSKINXXXXXXXXXXXXXTWGKRSLTELEAEERLSYSCEK 264
           VKK PP + WKVNEKLFPC+LS                 WG++SLTELEAEERLSYSCEK
Sbjct: 623 VKKAPPKRTWKVNEKLFPCKLSNEKAKLAEEAVQSAVEAWGQKSLTELEAEERLSYSCEK 682

Query: 265 GPAQDEVIAELRNAFLEISKEYKVFTEEERKKVVAAGGLHVVGTERHESRRIDNQLRGRS 324
           GP QDEVI +LR AFL I+KEYK +T+EERKKVV AGGLHVVGTERHESRRIDNQLRGRS
Sbjct: 683 GPVQDEVIGKLRTAFLAIAKEYKGYTDEERKKVVEAGGLHVVGTERHESRRIDNQLRGRS 742

Query: 325 GRQGDPGSSRFFLSLEDNIFRIFGGDRIQGLMRAFRVEDLPIESKMLTKALDEAQRKVEN 384
           GRQGDPGSSRFFLSLEDNIFRIFGGDRIQG+MRAFRVEDLPIESKMLTKALDEAQRKVEN
Sbjct: 743 GRQGDPGSSRFFLSLEDNIFRIFGGDRIQGMMRAFRVEDLPIESKMLTKALDEAQRKVEN 802

Query: 385 YFFDIRKQLFEFDEVLNSQ-------------------ILIEYAELTMDDILEANIGSDS 425
           YFFDIRKQLFEFDEVLNSQ                   ++IEYAELTMDDILEANIG D+
Sbjct: 803 YFFDIRKQLFEFDEVLNSQRDRVYTERRRALVSDSLEPLIIEYAELTMDDILEANIGPDT 862

Query: 426 TKDSWDLEKLIAKIQQ 441
            K+SWD EKLIAK+QQ
Sbjct: 863 PKESWDFEKLIAKVQQ 878


>AT1G21650.2 | Symbols: SECA2 | Preprotein translocase SecA family
           protein | chr1:7592891-7600590 REVERSE LENGTH=1058
          Length = 1058

 Score =  318 bits (815), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 192/474 (40%), Positives = 261/474 (55%), Gaps = 48/474 (10%)

Query: 4   RRWSDGLHQAVEAKEGLPIQNETVTLASISYQNFFLQFPKLCGMTGTAATESTEFESIYK 63
           RRWS+G+HQAVEAKEGL IQ +++ +A I+YQ+ F  +PKL GMTGTA TE  EF  +++
Sbjct: 396 RRWSEGVHQAVEAKEGLEIQADSIVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQ 455

Query: 64  LKVTIVPTNKPMIRKDDSDVVFRATTGKWRAVVVEISRMHKTGRPVLVGTTSVEQSDSLS 123
           + V  VPTN   IR D     F    GKW  V  E+  M   GRPVLVGTTSVE S+ LS
Sbjct: 456 IPVIEVPTNLSNIRIDLPIQAFATARGKWEHVRREVEDMFGQGRPVLVGTTSVENSEYLS 515

Query: 124 EQLKEVGIPHEVLNAKPENVEREAEIVTQSGRLGAVTIATNMAGRGTDIILGGNAEFMAR 183
           E LKE GIPH VLNA+P+   REA+ + Q+GR  A+TI+TNMAGRGTDIILGGN + +AR
Sbjct: 516 ELLKEWGIPHNVLNARPKYAAREADFIAQAGRKYAITISTNMAGRGTDIILGGNPKMLAR 575

Query: 184 LKLREILMPRVVKPAEGEFVSVKKPPPSKIWKVNEKLFPCQLSKINXXXXXXXXXXXXXT 243
             + + ++  +      + +   +     + K+  K+ P  L+ +              +
Sbjct: 576 EIIEDSILSYLTSEVLADNIDDDELSQKVLSKI--KVGPSSLALLARASLMAKYVGKSES 633

Query: 244 WGKRSLTELEAEERLSYSCEKGPAQDEVIAELRN-----------------AFLEISKEY 286
              +S T  +A+  ++ S EK    D +  EL+N                 A+L + K+ 
Sbjct: 634 ---KSWTRKKAKSVVTESLEKSQTMDPM--ELQNLINEQSEMYPLGPAIALAYLSVLKDC 688

Query: 287 KVFTEEERKKVVAAGGLHVVGTERHESRRIDNQLRGRSGRQGDPGSSRFFLSLEDNIFRI 346
           +     E  +V   GGLHV+GT  HESRRIDNQLRGR+GRQGDPGS+RF +SL+D +F+ 
Sbjct: 689 EAHCLHEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMISLQDEMFQK 748

Query: 347 FGGDR---IQGLMRAFRVEDLPIESKMLTKALDEAQRKVENYFFDIRKQLFEFDEVLN-- 401
           F  D    ++ + +    EDLPIE   + K L   Q   E YFF IRK L EFDEVL   
Sbjct: 749 FNFDTEWAVRLISKITNDEDLPIEGDTIVKQLLALQINAEKYFFGIRKSLVEFDEVLEVQ 808

Query: 402 -------------------SQILIEYAELTMDDILEANIGSDSTKDSWDLEKLI 436
                              SQ + +Y +  +D+I+  N         W L KL+
Sbjct: 809 RKHVYDLRQLLLTGENESCSQHIFQYMQAVVDEIVVGNSNPQKHPRYWSLAKLL 862


>AT1G21650.1 | Symbols: SECA2 | Preprotein translocase SecA family
           protein | chr1:7592891-7600590 REVERSE LENGTH=1051
          Length = 1051

 Score =  318 bits (815), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 192/474 (40%), Positives = 261/474 (55%), Gaps = 48/474 (10%)

Query: 4   RRWSDGLHQAVEAKEGLPIQNETVTLASISYQNFFLQFPKLCGMTGTAATESTEFESIYK 63
           RRWS+G+HQAVEAKEGL IQ +++ +A I+YQ+ F  +PKL GMTGTA TE  EF  +++
Sbjct: 396 RRWSEGVHQAVEAKEGLEIQADSIVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQ 455

Query: 64  LKVTIVPTNKPMIRKDDSDVVFRATTGKWRAVVVEISRMHKTGRPVLVGTTSVEQSDSLS 123
           + V  VPTN   IR D     F    GKW  V  E+  M   GRPVLVGTTSVE S+ LS
Sbjct: 456 IPVIEVPTNLSNIRIDLPIQAFATARGKWEHVRREVEDMFGQGRPVLVGTTSVENSEYLS 515

Query: 124 EQLKEVGIPHEVLNAKPENVEREAEIVTQSGRLGAVTIATNMAGRGTDIILGGNAEFMAR 183
           E LKE GIPH VLNA+P+   REA+ + Q+GR  A+TI+TNMAGRGTDIILGGN + +AR
Sbjct: 516 ELLKEWGIPHNVLNARPKYAAREADFIAQAGRKYAITISTNMAGRGTDIILGGNPKMLAR 575

Query: 184 LKLREILMPRVVKPAEGEFVSVKKPPPSKIWKVNEKLFPCQLSKINXXXXXXXXXXXXXT 243
             + + ++  +      + +   +     + K+  K+ P  L+ +              +
Sbjct: 576 EIIEDSILSYLTSEVLADNIDDDELSQKVLSKI--KVGPSSLALLARASLMAKYVGKSES 633

Query: 244 WGKRSLTELEAEERLSYSCEKGPAQDEVIAELRN-----------------AFLEISKEY 286
              +S T  +A+  ++ S EK    D +  EL+N                 A+L + K+ 
Sbjct: 634 ---KSWTRKKAKSVVTESLEKSQTMDPM--ELQNLINEQSEMYPLGPAIALAYLSVLKDC 688

Query: 287 KVFTEEERKKVVAAGGLHVVGTERHESRRIDNQLRGRSGRQGDPGSSRFFLSLEDNIFRI 346
           +     E  +V   GGLHV+GT  HESRRIDNQLRGR+GRQGDPGS+RF +SL+D +F+ 
Sbjct: 689 EAHCLHEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMISLQDEMFQK 748

Query: 347 FGGDR---IQGLMRAFRVEDLPIESKMLTKALDEAQRKVENYFFDIRKQLFEFDEVLN-- 401
           F  D    ++ + +    EDLPIE   + K L   Q   E YFF IRK L EFDEVL   
Sbjct: 749 FNFDTEWAVRLISKITNDEDLPIEGDTIVKQLLALQINAEKYFFGIRKSLVEFDEVLEVQ 808

Query: 402 -------------------SQILIEYAELTMDDILEANIGSDSTKDSWDLEKLI 436
                              SQ + +Y +  +D+I+  N         W L KL+
Sbjct: 809 RKHVYDLRQLLLTGENESCSQHIFQYMQAVVDEIVVGNSNPQKHPRYWSLAKLL 862


>AT1G21650.3 | Symbols: SECA2 | Preprotein translocase SecA family
            protein | chr1:7592891-7604152 REVERSE LENGTH=1805
          Length = 1805

 Score =  317 bits (813), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 192/474 (40%), Positives = 261/474 (55%), Gaps = 48/474 (10%)

Query: 4    RRWSDGLHQAVEAKEGLPIQNETVTLASISYQNFFLQFPKLCGMTGTAATESTEFESIYK 63
            RRWS+G+HQAVEAKEGL IQ +++ +A I+YQ+ F  +PKL GMTGTA TE  EF  +++
Sbjct: 1143 RRWSEGVHQAVEAKEGLEIQADSIVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQ 1202

Query: 64   LKVTIVPTNKPMIRKDDSDVVFRATTGKWRAVVVEISRMHKTGRPVLVGTTSVEQSDSLS 123
            + V  VPTN   IR D     F    GKW  V  E+  M   GRPVLVGTTSVE S+ LS
Sbjct: 1203 IPVIEVPTNLSNIRIDLPIQAFATARGKWEHVRREVEDMFGQGRPVLVGTTSVENSEYLS 1262

Query: 124  EQLKEVGIPHEVLNAKPENVEREAEIVTQSGRLGAVTIATNMAGRGTDIILGGNAEFMAR 183
            E LKE GIPH VLNA+P+   REA+ + Q+GR  A+TI+TNMAGRGTDIILGGN + +AR
Sbjct: 1263 ELLKEWGIPHNVLNARPKYAAREADFIAQAGRKYAITISTNMAGRGTDIILGGNPKMLAR 1322

Query: 184  LKLREILMPRVVKPAEGEFVSVKKPPPSKIWKVNEKLFPCQLSKINXXXXXXXXXXXXXT 243
              + + ++  +      + +   +     + K+  K+ P  L+ +              +
Sbjct: 1323 EIIEDSILSYLTSEVLADNIDDDELSQKVLSKI--KVGPSSLALLARASLMAKYVGKSES 1380

Query: 244  WGKRSLTELEAEERLSYSCEKGPAQDEVIAELRN-----------------AFLEISKEY 286
               +S T  +A+  ++ S EK    D +  EL+N                 A+L + K+ 
Sbjct: 1381 ---KSWTRKKAKSVVTESLEKSQTMDPM--ELQNLINEQSEMYPLGPAIALAYLSVLKDC 1435

Query: 287  KVFTEEERKKVVAAGGLHVVGTERHESRRIDNQLRGRSGRQGDPGSSRFFLSLEDNIFRI 346
            +     E  +V   GGLHV+GT  HESRRIDNQLRGR+GRQGDPGS+RF +SL+D +F+ 
Sbjct: 1436 EAHCLHEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMISLQDEMFQK 1495

Query: 347  FGGDR---IQGLMRAFRVEDLPIESKMLTKALDEAQRKVENYFFDIRKQLFEFDEVLN-- 401
            F  D    ++ + +    EDLPIE   + K L   Q   E YFF IRK L EFDEVL   
Sbjct: 1496 FNFDTEWAVRLISKITNDEDLPIEGDTIVKQLLALQINAEKYFFGIRKSLVEFDEVLEVQ 1555

Query: 402  -------------------SQILIEYAELTMDDILEANIGSDSTKDSWDLEKLI 436
                               SQ + +Y +  +D+I+  N         W L KL+
Sbjct: 1556 RKHVYDLRQLLLTGENESCSQHIFQYMQAVVDEIVVGNSNPQKHPRYWSLAKLL 1609