Miyakogusa Predicted Gene

Lj0g3v0311799.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0311799.1 Non Chatacterized Hit- tr|I1IBY1|I1IBY1_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,34.03,2e-18,seg,NULL,CUFF.21042.1
         (433 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G37010.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   155   6e-38
AT1G65710.1 | Symbols:  | unknown protein; INVOLVED IN: N-termin...    77   2e-14

>AT5G37010.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN: N-terminal
           protein myristoylation; EXPRESSED IN: 22 plant
           structures; EXPRESSED DURING: 13 growth stages; BEST
           Arabidopsis thaliana protein match is: unknown protein
           (TAIR:AT1G65710.1); Has 6746 Blast hits to 5259 proteins
           in 486 species: Archae - 7; Bacteria - 485; Metazoa -
           3508; Fungi - 577; Plants - 378; Viruses - 50; Other
           Eukaryotes - 1741 (source: NCBI BLink). |
           chr5:14620853-14622879 REVERSE LENGTH=637
          Length = 637

 Score =  155 bits (391), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 140/377 (37%), Positives = 180/377 (47%), Gaps = 105/377 (27%)

Query: 1   MVSVPATVSSLVMDKSNNGGGEFATSTGVKRIMVKRNVG-GASPRSQSPXXXXXXXXXXX 59
            VSVPAT  +L    +NNG G       VKRI VKRNVG  ASPRSQSP           
Sbjct: 244 FVSVPATDKAL---SNNNGDG------SVKRITVKRNVGKAASPRSQSPARAAS------ 288

Query: 60  XXLSENQQHPSLSRNSSKKAEHSPYRRIPLSEVEPNNLAFPHSTAN-----NNSSMVQNR 114
                    PS S+  S+K EHSPYRR PLSE++PN++AFP S  +     NN  M+ NR
Sbjct: 289 --------QPSPSK-LSRKTEHSPYRRNPLSEIDPNSVAFPLSQGDKLGSGNNIRMM-NR 338

Query: 115 PK------KEIETEANQKPN-------ACRAAMDKGLDVNCKIKVQQE--EDVKVQSSMT 159
                   KE  T   QK N         +A + +    +  IK QQE  E+ K+     
Sbjct: 339 DNENQGLVKESGTFVAQKLNPVMNTKTVTQAPIRRTASPSRAIKEQQEAVEECKI----- 393

Query: 160 DNVVVKTVITSAVDNLKPPILTXXXXXXXXXDLDLNPEALLN----------------PP 203
                  V++S  +  KP I++         D D +PEALL+                  
Sbjct: 394 -------VVSSGTELAKPQIVSRSRSLRKSRDFDFSPEALLSNNIDINNVNSNNATAGST 446

Query: 204 PQSYTSLLLEDIHNFHQKNTPPVSLPACVTKACAILEAVADLNSNTSSNCSRHGYQSSKS 263
             SYT+LLLEDI NFHQK+    +L + ++KAC+I+EAVADLNS T+        Q  ++
Sbjct: 447 FPSYTALLLEDIQNFHQKSVNVSALSSSMSKACSIVEAVADLNSATN--------QHQRT 498

Query: 264 EYNVLFGTTNDHGKRVPEPDTKDPLAEYESFVNDDVMEPSLHNYVTVNRDGSLGGVDMED 323
           E +     T+   K+                   D+MEPS   YVTV R GS    DME+
Sbjct: 499 EVSF----TSAAAKKA------------------DLMEPSFEKYVTVKRGGSSLD-DMEE 535

Query: 324 QESSGSNSFTQQQHYIQ 340
           QESSGSNSFT     +Q
Sbjct: 536 QESSGSNSFTGSSCVVQ 552


>AT1G65710.1 | Symbols:  | unknown protein; INVOLVED IN: N-terminal
           protein myristoylation; EXPRESSED IN: cultured cell;
           BEST Arabidopsis thaliana protein match is: unknown
           protein (TAIR:AT5G37010.1); Has 2241 Blast hits to 1776
           proteins in 164 species: Archae - 0; Bacteria - 29;
           Metazoa - 1759; Fungi - 94; Plants - 93; Viruses - 17;
           Other Eukaryotes - 249 (source: NCBI BLink). |
           chr1:24437057-24438424 REVERSE LENGTH=455
          Length = 455

 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/129 (41%), Positives = 68/129 (52%), Gaps = 35/129 (27%)

Query: 207 YTSLLLEDIHNFHQKNTPP--VSLPACVTKACAILEAVADLNSNTSSNCSRHGYQSSKSE 264
           YT+LLL+DI +FH K+     +SLP CV+KAC+I+EAVADLNS T+  C R    S  S 
Sbjct: 360 YTALLLKDIQSFHGKSVDDSVISLPLCVSKACSIVEAVADLNSMTNRTCLR----SDSSR 415

Query: 265 YNVLFGTTNDHGKRVPEPDTKDPLAEYESFVNDDVMEPSLHNYVTVNRDGSLGGVDMEDQ 324
           +   F +T                         D+MEPS   YVTV R    GG  +E  
Sbjct: 416 FR--FTSTVKKA---------------------DLMEPSFEKYVTVKR----GGGSLE-- 446

Query: 325 ESSGSNSFT 333
           ESSGSN+ T
Sbjct: 447 ESSGSNNVT 455



 Score = 58.5 bits (140), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 43/100 (43%), Positives = 52/100 (52%), Gaps = 30/100 (30%)

Query: 1   MVSVPATVSSLVMDKSNNGGGEFATSTGVKRIMVKRNVG-----GASPRSQSPXXXXXXX 55
            V++PAT      DKSNN          VKRI VKRN+G      ASPRS+SP       
Sbjct: 228 FVTIPAT------DKSNN------VEPLVKRITVKRNIGDACRIAASPRSKSPARA---- 271

Query: 56  XXXXXXLSENQQHPSLSRNSSKKAEHSPYRRIPLSEVEPN 95
                        PSLSR++S+KAE SPYRR PL E++ N
Sbjct: 272 ---------GNNVPSLSRSNSRKAEQSPYRRNPLGEIDQN 302