Miyakogusa Predicted Gene

Lj0g3v0311789.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0311789.1 Non Chatacterized Hit- tr|I1LM16|I1LM16_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.47776
PE,78.25,0,Multidrug resistance efflux transporter EmrE,NULL;
seg,NULL; EamA,Drug/metabolite transporter,CUFF.21041.1
         (391 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G02690.1 | Symbols:  | nodulin MtN21 /EamA-like transporter f...   400   e-111

>AT3G02690.1 | Symbols:  | nodulin MtN21 /EamA-like transporter
           family protein | chr3:579627-581448 FORWARD LENGTH=417
          Length = 417

 Score =  400 bits (1027), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 206/320 (64%), Positives = 240/320 (75%), Gaps = 10/320 (3%)

Query: 73  VDCVGTGQNAECTVNLEQQDGSAKQEDESSPATMLCLAEGLW-ELAVLVSPFFFWGTAMV 131
           VDCVG G + EC  N E        ++E+  + +L   EG + E  VL+SPFFFWGTAMV
Sbjct: 89  VDCVGMGSDVECVNNGE--------DEENRSSGILSGGEGTFLEWTVLISPFFFWGTAMV 140

Query: 132 AMKEVLPKCGPFFVSAFRLIPAGFLLVGFAASRGRPLPSGFNAWVSISLFALVDATCFQG 191
           AMKEVLP  GPFFV+AFRLIPAG LLV FA  +GRPLP G NAW SI+LFALVDATCFQG
Sbjct: 141 AMKEVLPITGPFFVAAFRLIPAGLLLVAFAVYKGRPLPEGINAWFSIALFALVDATCFQG 200

Query: 192 FLAEGLQKTSAGLGSVIIDSQPLTVAVLAVLLFGESXXXXXXXXXXXXXXXXXXXELPAL 251
           FLA+GLQ+TSAGLGSVIIDSQPLTVAVLA  LFGES                   E+P++
Sbjct: 201 FLAQGLQRTSAGLGSVIIDSQPLTVAVLASFLFGESIGIVRAGGLLLGVAGLLLLEVPSV 260

Query: 252 SFDESNFSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDPIMATGWHMVIGGLPLVALAI 311
           + D +NFSLWGSGEWWMLLAAQSMA+GTVMVRWVSKYSDPIMATGWHMVIGGLPL+A+++
Sbjct: 261 TSDGNNFSLWGSGEWWMLLAAQSMAIGTVMVRWVSKYSDPIMATGWHMVIGGLPLLAISV 320

Query: 312 FNNDPAVSGTLE-YSSSDILALLYTSIFGSAVSYGVFFYXXXXXXXXXXXXXXXXXPMFA 370
            N+DP  +G+L+  S++D++ALLYTSIFGSAVSYGV+FY                 PMFA
Sbjct: 321 INHDPVFNGSLQDLSTNDVIALLYTSIFGSAVSYGVYFYSATKGSLTKLSSLTFLTPMFA 380

Query: 371 SIFGFLYLGETFSPIQLVGA 390
           SIFG+LYL ETFS +QLVGA
Sbjct: 381 SIFGYLYLNETFSSLQLVGA 400