Miyakogusa Predicted Gene
- Lj0g3v0311489.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0311489.1 Non Chatacterized Hit- tr|C5XPV9|C5XPV9_SORBI
Putative uncharacterized protein Sb03g040130
OS=Sorghu,28.12,2e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
PPR_2,Pentatricopeptide repeat; PPR_1,Pentatricopep,CUFF.21020.1
(541 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 512 e-145
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 205 6e-53
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 205 6e-53
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 9e-49
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 191 1e-48
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 2e-48
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 3e-48
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 3e-48
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 4e-48
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 5e-48
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 187 2e-47
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 2e-47
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 2e-47
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 186 3e-47
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 185 7e-47
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 1e-46
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 2e-46
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 183 3e-46
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 183 3e-46
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 183 3e-46
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 181 2e-45
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 2e-45
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 2e-45
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 179 5e-45
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 6e-45
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 178 8e-45
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 178 8e-45
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 2e-44
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 175 7e-44
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 1e-43
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 173 3e-43
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 3e-43
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 172 4e-43
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 6e-43
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 170 3e-42
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 170 3e-42
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 3e-42
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 169 6e-42
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 2e-41
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 2e-41
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 3e-41
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 3e-41
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 5e-41
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 7e-41
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 1e-40
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 2e-40
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 164 2e-40
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 2e-40
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 3e-40
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 161 1e-39
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 2e-39
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 2e-39
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 160 2e-39
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 160 3e-39
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 5e-39
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 6e-39
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 6e-39
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 7e-39
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 158 7e-39
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 1e-38
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 2e-38
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 157 2e-38
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 157 2e-38
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 5e-38
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 7e-38
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 154 2e-37
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 2e-36
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 150 3e-36
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 3e-36
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 149 4e-36
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 5e-36
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 7e-36
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 1e-35
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 147 2e-35
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 146 4e-35
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 6e-35
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 145 7e-35
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 8e-35
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 2e-34
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 2e-33
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 140 3e-33
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 3e-33
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 139 5e-33
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 138 8e-33
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 138 1e-32
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 137 2e-32
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 4e-32
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 3e-31
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 3e-31
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 3e-31
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 3e-31
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 4e-31
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 1e-30
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 130 3e-30
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 130 3e-30
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 5e-30
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 7e-30
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 9e-30
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 9e-30
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 1e-29
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 127 2e-29
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 3e-29
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 5e-29
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 5e-29
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 1e-28
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 123 3e-28
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 6e-28
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 3e-27
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 119 4e-27
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 9e-27
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 1e-26
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 7e-26
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 115 8e-26
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 1e-25
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 114 2e-25
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 3e-25
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 3e-25
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 9e-25
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 9e-25
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 111 2e-24
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 2e-24
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 5e-24
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 6e-24
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 6e-24
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 7e-24
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 7e-24
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 1e-23
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 4e-23
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 7e-23
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 8e-23
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 8e-23
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 9e-23
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 1e-22
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 1e-22
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 5e-22
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 101 2e-21
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 5e-21
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 5e-21
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 6e-21
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 99 1e-20
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 98 1e-20
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 97 3e-20
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 6e-20
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 6e-20
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 8e-20
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 95 1e-19
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 94 3e-19
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 4e-19
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 6e-19
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 7e-19
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 9e-19
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 91 2e-18
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 91 3e-18
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 5e-18
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 7e-18
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 8e-18
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 89 9e-18
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 87 2e-17
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 87 3e-17
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 87 3e-17
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 5e-17
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 5e-17
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 8e-17
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 9e-17
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 83 5e-16
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 6e-16
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 82 7e-16
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 82 8e-16
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 9e-16
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 80 3e-15
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 4e-15
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 79 6e-15
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 79 9e-15
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 1e-14
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 77 2e-14
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 2e-14
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 77 2e-14
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 77 3e-14
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 4e-14
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 5e-14
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 76 6e-14
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 75 1e-13
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 3e-13
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 74 3e-13
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 5e-13
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 7e-13
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 72 9e-13
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 2e-12
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 70 4e-12
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 5e-12
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 70 5e-12
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 69 7e-12
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 69 9e-12
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 69 1e-11
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 67 2e-11
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 3e-11
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 67 4e-11
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 66 6e-11
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 65 1e-10
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 65 1e-10
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 65 2e-10
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 64 2e-10
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 3e-10
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 64 4e-10
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 63 5e-10
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 63 5e-10
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 63 5e-10
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 62 8e-10
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 9e-10
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 62 1e-09
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G28380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT5G28340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 60 4e-09
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 9e-09
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT3G60960.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 4e-08
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 55 1e-07
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 55 1e-07
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 55 2e-07
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 3e-07
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 53 5e-07
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 52 9e-07
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 52 1e-06
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
AT3G60980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 512 bits (1319), Expect = e-145, Method: Compositional matrix adjust.
Identities = 252/503 (50%), Positives = 342/503 (67%), Gaps = 11/503 (2%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D N LL+GFCK G++ EA LLRL E+DG + L GYSSLIDG F+ARRY +A LY
Sbjct: 267 DSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELY 326
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
M+K I PD+ILY I+++GLS G++ +A+K+ + M +G+ PD +CYNA+IK C
Sbjct: 327 ANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGR 386
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
G L+ RSL +E+S + D CTHTILIC MC+ G+VREA+E+F ++EK GC PS TF
Sbjct: 387 GLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATF 446
Query: 189 NALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQ 248
NALI+GLCK+G+L EA LL +KME+G+ SLF RL+ + D+ M E+G
Sbjct: 447 NALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDT---------MVESGS 497
Query: 249 TLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGT 308
L AY+ L AD+G PDI +YN+LIN FC+AG+++GA KL LQLKGLSPDSVTY T
Sbjct: 498 ILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNT 557
Query: 309 LIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSL 368
LI+GL+RV REE+AFK+ K S AVY++LMTW CR +K+ +AF+L+++YLK +
Sbjct: 558 LINGLHRVGREEEAFKL--FYAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKI 615
Query: 369 PGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALI 428
D+++ N +E+ F +GE ERA+R L+ELD R + L PY+I LIG CQ+ + EAL+
Sbjct: 616 SCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALM 675
Query: 429 IFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKELLECLL 488
+FSVL E I + P SCV LI GLC + L A+ +FLY+LD F+L P++C LL LL
Sbjct: 676 VFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYTLDNNFKLMPRVCNYLLSSLL 735
Query: 489 VSQDKRKYAIDLIGRMKSRGYRL 511
S +K + L RM+ GY +
Sbjct: 736 ESTEKMEIVSQLTNRMERAGYNV 758
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 127/461 (27%), Positives = 208/461 (45%), Gaps = 41/461 (8%)
Query: 9 DLATFNVLLNGFCKQGKLEEAV-SLLRLLERDGRGIRLSGYSSLIDGFFKARRYNE-AHS 66
D F VL++ + K G E+AV S R+ E D R + Y+ ++ + + A +
Sbjct: 126 DSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFT-YNVILRVMMREEVFFMLAFA 184
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
+Y M+K P++ + I++ GL +GR +A KMF +M RG+ P+ Y +I G C
Sbjct: 185 VYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLC 244
Query: 127 DIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAV 186
G D AR L E+ D+ H L+ CK G + EA E+ EK G
Sbjct: 245 QRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLR 304
Query: 187 TFNALINGLCKAGKLDEAHLLFYKM---EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHM 243
+++LI+GL +A + +A L+ M I L+ L QG +
Sbjct: 305 GYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQG----------------L 348
Query: 244 CEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDS 303
+AG+ +A KLL+ + G+ PD YN +I + C G + L ++ PD+
Sbjct: 349 SKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDA 408
Query: 304 VTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLA------ 357
T+ LI + R +A +I + K C PS A + AL+ LC+ ++ A
Sbjct: 409 CTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHK 468
Query: 358 ------FSLYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYS 411
SL+L L N S + + E G + +A R L ++ Y+
Sbjct: 469 MEVGRPASLFLR----LSHSGNRSFDTMVE---SGSILKAYRDLAHFADTGSSPDIVSYN 521
Query: 412 ILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGL 452
+L+ GFC+A +D AL + +VL ++ + + LI+GL
Sbjct: 522 VLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGL 562
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 167/360 (46%), Gaps = 17/360 (4%)
Query: 74 GGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC-DIGQLD 132
GG+ D + +++ + G +AV+ F M + PD YN I++ +
Sbjct: 121 GGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFM 180
Query: 133 HARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALI 192
A +++ E+ + + T IL+ + KKG +AQ+MF+ M G P+ VT+ LI
Sbjct: 181 LAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILI 240
Query: 193 NGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNA 252
+GLC+ G D+A LFY+M Q S + DSV+ ++ C+ G+ + A
Sbjct: 241 SGLCQRGSADDARKLFYEM-------------QTSGNYPDSVAHNALLDGFCKLGRMVEA 287
Query: 253 YKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDG 312
++LL G V ++ Y+ LI+ +A AF+L+ ++ K + PD + Y LI G
Sbjct: 288 FELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQG 347
Query: 313 LYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEY--LKSLPG 370
L + + EDA K+ M P Y A++ LC + SL LE +S P
Sbjct: 348 LSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPD 407
Query: 371 RDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIF 430
+I + G V A E++ ++A ++ L+ G C++ ++ EA ++
Sbjct: 408 ACTHTI-LICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLL 466
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 160/384 (41%), Gaps = 60/384 (15%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M + + D+ + +L+ G K GK+E+A+ LL + G Y+++I
Sbjct: 329 MLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGL 388
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
E SL M + PD + I++ + G V EA ++F E+ + G P +NA
Sbjct: 389 LEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNA 448
Query: 121 IIKGFCDIGQLDHAR------------SLHVEISGHDGLH-------------------- 148
+I G C G+L AR SL + +S H G
Sbjct: 449 LIDGLCKSGELKEARLLLHKMEVGRPASLFLRLS-HSGNRSFDTMVESGSILKAYRDLAH 507
Query: 149 --------DTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGK 200
D ++ +LI C+ G + A ++ N ++ G P +VT+N LINGL + G+
Sbjct: 508 FADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGR 567
Query: 201 LDEAHLLFY-KMEIGKSPSLFFRLAQGS---DHVSDSVSLQKK---------------VE 241
+EA LFY K + SP+++ L S V + +L K +E
Sbjct: 568 EEEAFKLFYAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIE 627
Query: 242 HMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSP 301
+ G+T A + L +L + Y I + C++G + A +F L+ K +
Sbjct: 628 QCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILV 687
Query: 302 DSVTYGTLIDGLYRVEREEDAFKI 325
+ LI GL + E+ + A ++
Sbjct: 688 TPPSCVKLIHGLCKREQLDAAIEV 711
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 124/296 (41%), Gaps = 24/296 (8%)
Query: 253 YKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDG 312
++ L +L GV D + +LI+++ K G A + F ++ PD TY ++
Sbjct: 112 WQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVIL-- 169
Query: 313 LYRVEREED-----AFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKS 367
RV E+ AF + + MLK C P+ + LM L + + S A ++ +
Sbjct: 170 --RVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGR 227
Query: 368 --LPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDE 425
P R +I + +G + A + E+ + ++ LL GFC+ ++ E
Sbjct: 228 GISPNRVTYTI-LISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVE 286
Query: 426 ALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKELLE 485
A + + ++ + LI GL R A ++ L K + P I +L
Sbjct: 287 AFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIK--PDI---ILY 341
Query: 486 CLLVS----QDKRKYAIDLIGRMKSRGYRLHKYQYRQTISLL---QQLQEGKAVKL 534
+L+ K + A+ L+ M S+G Y Y I L L+EG++++L
Sbjct: 342 TILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQL 397
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 205 bits (522), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 131/438 (29%), Positives = 221/438 (50%), Gaps = 28/438 (6%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M ++ + D+ +++ ++NG+C+ G+L++ L+ +++R G Y S+I + +
Sbjct: 272 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 331
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
EA + MI+ GILPD ++Y ++ G G + A K F EM R + PD Y A
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 391
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
II GFC IG + A L E+ D+ T T LI CK G +++A + N M + G
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKK 239
C P+ VT+ LI+GLCK G LD A+ L ++M +IG P++F +
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF--------------TYNSI 497
Query: 240 VEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGL 299
V +C++G A KL+ + +G+ D TY L++++CK+G M+ A ++ K++ KGL
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Query: 300 SPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFS 359
P VT+ L++G ED K+ + ML P+ + +L+ C + A +
Sbjct: 558 QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATA 617
Query: 360 LYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDF-------NLAPYSI 412
+Y + G D + E +KG + R + E F F++ +++ YS+
Sbjct: 618 IYKDMCSRGVGPDGKTY----ENLVKGHCK--ARNMKEAWFLFQEMKGKGFSVSVSTYSV 671
Query: 413 LLIGFCQAKKVDEALIIF 430
L+ GF + KK EA +F
Sbjct: 672 LIKGFLKRKKFLEAREVF 689
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 124/459 (27%), Positives = 231/459 (50%), Gaps = 16/459 (3%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
++A++N++++ C+ G+++EA LL L+E G + YS++++G+ + ++ L
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
M + G+ P+ +Y ++ L ++ EA + F+EMI++G+LPD Y +I GFC
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
G + A E+ D D T+T +I C+ G + EA ++F++M G P +VTF
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 189 NALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAG 247
LING CKAG + +A + M + G SP++ V+ ++ +C+ G
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNV--------------VTYTTLIDGLCKEG 470
Query: 248 QTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYG 307
+A +LL ++ G+ P+I TYN ++N CK+GN+ A KL + + GL+ D+VTY
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 530
Query: 308 TLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKS 367
TL+D + + A +I ML +P+ + LM C + L L
Sbjct: 531 TLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK 590
Query: 368 LPGRDNDSINAL-EEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEA 426
+ + N+L ++Y ++ ++ A ++ R + Y L+ G C+A+ + EA
Sbjct: 591 GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEA 650
Query: 427 LIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIF 465
+F + +++ ++ LI G ++ +A +F
Sbjct: 651 WFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVF 689
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/453 (26%), Positives = 209/453 (46%), Gaps = 27/453 (5%)
Query: 75 GILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHA 134
G+ +V Y I++ + GR+ EA + M +G PD Y+ ++ G+C G+LD
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 135 RSLHVEISGHDGLHDTC----THTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNA 190
L +E+ GL + L+C +CK + EA+E F++M + G P V +
Sbjct: 301 WKL-IEVMKRKGLKPNSYIYGSIIGLLCRICK---LAEAEEAFSEMIRQGILPDTVVYTT 356
Query: 191 LINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTL 250
LI+G CK G + A FY+M D D ++ + C+ G +
Sbjct: 357 LIDGFCKRGDIRAASKFFYEM-------------HSRDITPDVLTYTAIISGFCQIGDMV 403
Query: 251 NAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLI 310
A KL ++ G+ PD T+ LIN +CKAG+M AF++ + G SP+ VTY TLI
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463
Query: 311 DGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPG 370
DGL + + A ++ M K +P+ Y +++ LC+ I A L E+ G
Sbjct: 464 DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF--EAAG 521
Query: 371 RDNDSI---NALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEAL 427
+ D++ ++ Y GE+++A L E+ + + +++L+ GFC +++
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 581
Query: 428 IIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKELLECL 487
+ + + I N T+ L+ C + NL A I+ +G K + L++
Sbjct: 582 KLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGH 641
Query: 488 LVSQDKRKYAIDLIGRMKSRGYRLHKYQYRQTI 520
+++ ++ A L MK +G+ + Y I
Sbjct: 642 CKARNMKE-AWFLFQEMKGKGFSVSVSTYSVLI 673
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 148/330 (44%), Gaps = 50/330 (15%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M+ + + D TF L+NG+CK G +++A + + + G + Y++LIDG K
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+ A+ L M K G+ P++ Y ++ GL G + EAVK+ E GL D Y
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDT-CTHTILICEMCKKGMVREAQEMFNQMEKL 179
++ +C G++D A+ + E+ G GL T T +L+ C GM+ + +++ N M
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK 590
Query: 180 GCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKK 239
G P+A TFN+L+ C L A ++
Sbjct: 591 GIAPNATTFNSLVKQYCIRNNLKAATAIY------------------------------- 619
Query: 240 VEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGL 299
+ MC GV PD KTY L+ CKA NM A+ LF++++ KG
Sbjct: 620 -KDMCS----------------RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Query: 300 SPDSVTYGTLIDGLYRVEREEDAFKIRDHM 329
S TY LI G + ++ +A ++ D M
Sbjct: 663 SVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 104/459 (22%), Positives = 192/459 (41%), Gaps = 70/459 (15%)
Query: 114 DAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLH---DTC-THTILICEMCKKGMVREA 169
D ++ + D G L AR + ++ + GL D+C + + + C K A
Sbjct: 174 DPRVFDVFFQVLVDFGLLREARRVFEKMLNY-GLVLSVDSCNVYLTRLSKDCYK--TATA 230
Query: 170 QEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEI-GKSPSLFF------- 221
+F + ++G + ++N +I+ +C+ G++ EAH L ME+ G +P +
Sbjct: 231 IIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNG 290
Query: 222 ----------------------------------------RLAQGSDHVS---------D 232
+LA+ + S D
Sbjct: 291 YCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPD 350
Query: 233 SVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFK 292
+V ++ C+ G A K ++ + PD+ TY +I+ FC+ G+M A KLF
Sbjct: 351 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 410
Query: 293 DLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGK 352
++ KGL PDSVT+ LI+G + +DAF++ +HM++ C P+ Y L+ LC+
Sbjct: 411 EMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 470
Query: 353 KISLAFSLYLEYLKSLPGRDNDSINALEEYFMK-GEVERAIRGLLELDFRFRDFNLAPYS 411
+ A L E K + + N++ K G +E A++ + E + + + Y+
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 530
Query: 412 ILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVH--LISGLCAKRNLYDAVVIFLYSL 469
L+ +C++ ++D+A I + + PT L++G C L D + + L
Sbjct: 531 TLMDAYCKSGEMDKAQEILKEM--LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Query: 470 DKGFELGPKICKELLECLLVSQDKRKYAIDLIGRMKSRG 508
KG L++ + ++ K A + M SRG
Sbjct: 589 AKGIAPNATTFNSLVKQYCI-RNNLKAATAIYKDMCSRG 626
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 136/292 (46%), Gaps = 3/292 (1%)
Query: 248 QTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYG 307
+T A + + + GV ++ +YNI+I+ C+ G + A L ++LKG +PD ++Y
Sbjct: 226 KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYS 285
Query: 308 TLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKS 367
T+++G R + +K+ + M + +P+ +Y +++ LCR K++ A + E ++
Sbjct: 286 TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345
Query: 368 LPGRDNDSINALEEYFMK-GEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEA 426
D L + F K G++ A + E+ R ++ Y+ ++ GFCQ + EA
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405
Query: 427 LIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKELLEC 486
+F + + + + LI+G C ++ DA + + + G L++
Sbjct: 406 GKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG 465
Query: 487 LLVSQDKRKYAIDLIGRMKSRGYRLHKYQYRQTIS-LLQQLQEGKAVKLFSE 537
L D A +L+ M G + + + Y ++ L + +AVKL E
Sbjct: 466 LCKEGDLDS-ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 205 bits (522), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 131/438 (29%), Positives = 221/438 (50%), Gaps = 28/438 (6%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M ++ + D+ +++ ++NG+C+ G+L++ L+ +++R G Y S+I + +
Sbjct: 272 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 331
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
EA + MI+ GILPD ++Y ++ G G + A K F EM R + PD Y A
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 391
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
II GFC IG + A L E+ D+ T T LI CK G +++A + N M + G
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKK 239
C P+ VT+ LI+GLCK G LD A+ L ++M +IG P++F +
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF--------------TYNSI 497
Query: 240 VEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGL 299
V +C++G A KL+ + +G+ D TY L++++CK+G M+ A ++ K++ KGL
Sbjct: 498 VNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL 557
Query: 300 SPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFS 359
P VT+ L++G ED K+ + ML P+ + +L+ C + A +
Sbjct: 558 QPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATA 617
Query: 360 LYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDF-------NLAPYSI 412
+Y + G D + E +KG + R + E F F++ +++ YS+
Sbjct: 618 IYKDMCSRGVGPDGKTY----ENLVKGHCK--ARNMKEAWFLFQEMKGKGFSVSVSTYSV 671
Query: 413 LLIGFCQAKKVDEALIIF 430
L+ GF + KK EA +F
Sbjct: 672 LIKGFLKRKKFLEAREVF 689
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 124/459 (27%), Positives = 231/459 (50%), Gaps = 16/459 (3%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
++A++N++++ C+ G+++EA LL L+E G + YS++++G+ + ++ L
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
M + G+ P+ +Y ++ L ++ EA + F+EMI++G+LPD Y +I GFC
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
G + A E+ D D T+T +I C+ G + EA ++F++M G P +VTF
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 189 NALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAG 247
LING CKAG + +A + M + G SP++ V+ ++ +C+ G
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNV--------------VTYTTLIDGLCKEG 470
Query: 248 QTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYG 307
+A +LL ++ G+ P+I TYN ++N CK+GN+ A KL + + GL+ D+VTY
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 530
Query: 308 TLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKS 367
TL+D + + A +I ML +P+ + LM C + L L
Sbjct: 531 TLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK 590
Query: 368 LPGRDNDSINAL-EEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEA 426
+ + N+L ++Y ++ ++ A ++ R + Y L+ G C+A+ + EA
Sbjct: 591 GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEA 650
Query: 427 LIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIF 465
+F + +++ ++ LI G ++ +A +F
Sbjct: 651 WFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVF 689
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/453 (26%), Positives = 209/453 (46%), Gaps = 27/453 (5%)
Query: 75 GILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHA 134
G+ +V Y I++ + GR+ EA + M +G PD Y+ ++ G+C G+LD
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 135 RSLHVEISGHDGLHDTC----THTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNA 190
L +E+ GL + L+C +CK + EA+E F++M + G P V +
Sbjct: 301 WKL-IEVMKRKGLKPNSYIYGSIIGLLCRICK---LAEAEEAFSEMIRQGILPDTVVYTT 356
Query: 191 LINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTL 250
LI+G CK G + A FY+M D D ++ + C+ G +
Sbjct: 357 LIDGFCKRGDIRAASKFFYEM-------------HSRDITPDVLTYTAIISGFCQIGDMV 403
Query: 251 NAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLI 310
A KL ++ G+ PD T+ LIN +CKAG+M AF++ + G SP+ VTY TLI
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463
Query: 311 DGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPG 370
DGL + + A ++ M K +P+ Y +++ LC+ I A L E+ G
Sbjct: 464 DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF--EAAG 521
Query: 371 RDNDSI---NALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEAL 427
+ D++ ++ Y GE+++A L E+ + + +++L+ GFC +++
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 581
Query: 428 IIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKELLECL 487
+ + + I N T+ L+ C + NL A I+ +G K + L++
Sbjct: 582 KLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGH 641
Query: 488 LVSQDKRKYAIDLIGRMKSRGYRLHKYQYRQTI 520
+++ ++ A L MK +G+ + Y I
Sbjct: 642 CKARNMKE-AWFLFQEMKGKGFSVSVSTYSVLI 673
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 148/330 (44%), Gaps = 50/330 (15%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M+ + + D TF L+NG+CK G +++A + + + G + Y++LIDG K
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+ A+ L M K G+ P++ Y ++ GL G + EAVK+ E GL D Y
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDT-CTHTILICEMCKKGMVREAQEMFNQMEKL 179
++ +C G++D A+ + E+ G GL T T +L+ C GM+ + +++ N M
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK 590
Query: 180 GCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKK 239
G P+A TFN+L+ C L A ++
Sbjct: 591 GIAPNATTFNSLVKQYCIRNNLKAATAIY------------------------------- 619
Query: 240 VEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGL 299
+ MC GV PD KTY L+ CKA NM A+ LF++++ KG
Sbjct: 620 -KDMCS----------------RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Query: 300 SPDSVTYGTLIDGLYRVEREEDAFKIRDHM 329
S TY LI G + ++ +A ++ D M
Sbjct: 663 SVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 104/459 (22%), Positives = 192/459 (41%), Gaps = 70/459 (15%)
Query: 114 DAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLH---DTC-THTILICEMCKKGMVREA 169
D ++ + D G L AR + ++ + GL D+C + + + C K A
Sbjct: 174 DPRVFDVFFQVLVDFGLLREARRVFEKMLNY-GLVLSVDSCNVYLTRLSKDCYK--TATA 230
Query: 170 QEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEI-GKSPSLFF------- 221
+F + ++G + ++N +I+ +C+ G++ EAH L ME+ G +P +
Sbjct: 231 IIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNG 290
Query: 222 ----------------------------------------RLAQGSDHVS---------D 232
+LA+ + S D
Sbjct: 291 YCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPD 350
Query: 233 SVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFK 292
+V ++ C+ G A K ++ + PD+ TY +I+ FC+ G+M A KLF
Sbjct: 351 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 410
Query: 293 DLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGK 352
++ KGL PDSVT+ LI+G + +DAF++ +HM++ C P+ Y L+ LC+
Sbjct: 411 EMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 470
Query: 353 KISLAFSLYLEYLKSLPGRDNDSINALEEYFMK-GEVERAIRGLLELDFRFRDFNLAPYS 411
+ A L E K + + N++ K G +E A++ + E + + + Y+
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 530
Query: 412 ILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVH--LISGLCAKRNLYDAVVIFLYSL 469
L+ +C++ ++D+A I + + PT L++G C L D + + L
Sbjct: 531 TLMDAYCKSGEMDKAQEILKEM--LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Query: 470 DKGFELGPKICKELLECLLVSQDKRKYAIDLIGRMKSRG 508
KG L++ + ++ K A + M SRG
Sbjct: 589 AKGIAPNATTFNSLVKQYCI-RNNLKAATAIYKDMCSRG 626
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 136/292 (46%), Gaps = 3/292 (1%)
Query: 248 QTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYG 307
+T A + + + GV ++ +YNI+I+ C+ G + A L ++LKG +PD ++Y
Sbjct: 226 KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYS 285
Query: 308 TLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKS 367
T+++G R + +K+ + M + +P+ +Y +++ LCR K++ A + E ++
Sbjct: 286 TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345
Query: 368 LPGRDNDSINALEEYFMK-GEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEA 426
D L + F K G++ A + E+ R ++ Y+ ++ GFCQ + EA
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405
Query: 427 LIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKELLEC 486
+F + + + + LI+G C ++ DA + + + G L++
Sbjct: 406 GKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG 465
Query: 487 LLVSQDKRKYAIDLIGRMKSRGYRLHKYQYRQTIS-LLQQLQEGKAVKLFSE 537
L D A +L+ M G + + + Y ++ L + +AVKL E
Sbjct: 466 LCKEGDLDS-ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 191 bits (486), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 139/532 (26%), Positives = 240/532 (45%), Gaps = 50/532 (9%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R+ L TF V++ FC +++ A+SLLR + + G Y +LI K R
Sbjct: 208 MLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNR 267
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
NEA L M G +PD + ++ GL R+ EA KM M+ RG PD Y
Sbjct: 268 VNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGY 327
Query: 121 IIKGFCDIGQLDHARSLHVEI--------------------------------SGHDGLH 148
++ G C IG++D A+ L I + + +
Sbjct: 328 LMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP 387
Query: 149 DTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLF 208
D CT+ LI K+G+V A E+ + M GC P+ ++ L++G CK GK+DEA+ +
Sbjct: 388 DVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVL 447
Query: 209 YKMEI-GKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPD 267
+M G P ++V + C+ + A ++ ++ G PD
Sbjct: 448 NEMSADGLKP--------------NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPD 493
Query: 268 IKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRD 327
+ T+N LI+ C+ + A L +D+ +G+ ++VTY TLI+ R ++A K+ +
Sbjct: 494 VYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVN 553
Query: 328 HMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMK-G 386
M+ Y +L+ LCR ++ A SL+ + L+ N S N L + G
Sbjct: 554 EMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSG 613
Query: 387 EVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCV 446
VE A+ E+ R ++ ++ L+ G C+A ++++ L +F L I + +
Sbjct: 614 MVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFN 673
Query: 447 HLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKELLECLLVSQ--DKRKY 496
L+S LC +YDA ++ ++ GF + LL+ ++ + D+R++
Sbjct: 674 TLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRRRF 725
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 188/421 (44%), Gaps = 59/421 (14%)
Query: 99 AVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILIC 158
A +F +M+ R + P + ++K FC + ++D A SL +++ H + ++ + LI
Sbjct: 201 AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIH 260
Query: 159 EMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALI-------------------------- 192
+ K V EA ++ +M +GC P A TFN +I
Sbjct: 261 SLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAP 320
Query: 193 ---------NGLCKAGKLDEAHLLFYKMEIGKSPSLFF-----------RLAQGSDHVSD 232
NGLCK G++D A LFY+ I K + F RL +SD
Sbjct: 321 DDITYGYLMNGLCKIGRVDAAKDLFYR--IPKPEIVIFNTLIHGFVTHGRLDDAKAVLSD 378
Query: 233 SVSLQKKVEHMCEAGQTLNAY----------KLLTQLADSGVVPDIKTYNILINSFCKAG 282
V+ V +C + Y ++L + + G P++ +Y IL++ FCK G
Sbjct: 379 MVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLG 438
Query: 283 NMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYK 342
++ A+ + ++ GL P++V + LI + R +A +I M + C+P +
Sbjct: 439 KIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFN 498
Query: 343 ALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFM-KGEVERAIRGLLELDFR 401
+L++ LC +I A L + + + + N L F+ +GE++ A + + E+ F+
Sbjct: 499 SLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQ 558
Query: 402 FRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDA 461
+ Y+ L+ G C+A +VD+A +F + + SC LI+GLC + +A
Sbjct: 559 GSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEA 618
Query: 462 V 462
V
Sbjct: 619 V 619
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 148/553 (26%), Positives = 256/553 (46%), Gaps = 69/553 (12%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M + ++ T+N+L+ GFC G ++ A++L +E G + Y++LIDG+ K R+
Sbjct: 196 MLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK 255
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
++ L M G+ P++I Y +++ GL EGR+ E + EM +RG D YN
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNT 315
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+IKG+C G A +H E+ H T+T LI MCK G + A E +QM G
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKK 239
P+ T+ L++G + G ++EA+ + +M + G SPS+ V+
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSV--------------VTYNAL 421
Query: 240 VEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGL 299
+ C G+ +A +L + + G+ PD+ +Y+ +++ FC++ +++ A ++ +++ KG+
Sbjct: 422 INGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGI 481
Query: 300 SPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFS 359
PD++TY +LI G R ++A + + ML+ P Y AL
Sbjct: 482 KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTAL--------------- 526
Query: 360 LYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQ 419
INA Y M+G++E+A++ E+ + ++ YS+L+ G +
Sbjct: 527 ----------------INA---YCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK 567
Query: 420 AKKVDEAL---------------IIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVI 464
+ EA + + L E NI S V LI G C K + +A +
Sbjct: 568 QSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQV 627
Query: 465 FLYSLDKGFELGPKICKELLECLLVSQDKRKYAIDLIGRMKSRGYRLHKYQYRQTISLLQ 524
F L K + ++ + D RK A L M G+ LH I+L++
Sbjct: 628 FESMLGKNHKPDGTAYNIMIHGHCRAGDIRK-AYTLYKEMVKSGFLLHTV---TVIALVK 683
Query: 525 QL-QEGKAVKLFS 536
L +EGK +L S
Sbjct: 684 ALHKEGKVNELNS 696
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/467 (23%), Positives = 221/467 (47%), Gaps = 36/467 (7%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M ++ + +L ++NV++NG C++G+++E +L + R G + Y++LI G+ K
Sbjct: 266 MALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGN 325
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+++A ++ M++ G+ P VI Y ++ + G + A++ +M RGL P+ Y
Sbjct: 326 FHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTT 385
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
++ GF G ++ A + E++ + T+ LI C G + +A + M++ G
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG 445
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKK 239
P V+++ +++G C++ +DEA + +M E G P D+++
Sbjct: 446 LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKP--------------DTITYSSL 491
Query: 240 VEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGL 299
++ CE +T A L ++ G+ PD TY LIN++C G++ A +L ++ KG+
Sbjct: 492 IQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGV 551
Query: 300 SPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFS 359
PD VTY LI+GL + R +A ++ + PS Y L+ C + S
Sbjct: 552 LPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN-CSNIEFKSVVS 610
Query: 360 LYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQ 419
L ++ + MKG + A + + + + Y+I++ G C+
Sbjct: 611 L------------------IKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCR 652
Query: 420 AKKVDEALIIFSVLDEFNININPTSCVHLISGLC--AKRNLYDAVVI 464
A + +A ++ + + ++ + + L+ L K N ++V++
Sbjct: 653 AGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIV 699
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 170/403 (42%), Gaps = 68/403 (16%)
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKV 240
C+ ++ F+ ++ + +D+A + + LAQ + +S +
Sbjct: 130 CYSTSSVFDLVVKSYSRLSLIDKALSIVH-------------LAQAHGFMPGVLSYNAVL 176
Query: 241 EHMCEAGQTLN-AYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGL 299
+ + + ++ A + ++ +S V P++ TYNILI FC AGN++ A LF ++ KG
Sbjct: 177 DATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGC 236
Query: 300 SPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCR-GKKISLAF 358
P+ VTY TLIDG ++ + +D FK+ M EP+ Y ++ LCR G+ ++F
Sbjct: 237 LPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSF 296
Query: 359 SLYLEYLKSLPGRDNDSINALEEYFMK--------------------------------- 385
L E + D + N L + + K
Sbjct: 297 VL-TEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSM 355
Query: 386 ---GEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNIN-IN 441
G + RA+ L ++ R N Y+ L+ GF Q ++EA + VL E N N +
Sbjct: 356 CKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEA---YRVLREMNDNGFS 412
Query: 442 PTSCVH--LISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKELLECLLVSQDKRKYAID 499
P+ + LI+G C + DA+ + +KG L P + ++S R Y +D
Sbjct: 413 PSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG--LSPDVVS---YSTVLSGFCRSYDVD 467
Query: 500 LIGRMK----SRGYRLHKYQYRQTIS-LLQQLQEGKAVKLFSE 537
R+K +G + Y I +Q + +A L+ E
Sbjct: 468 EALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEE 510
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/379 (29%), Positives = 194/379 (51%), Gaps = 13/379 (3%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M ++ Q DL T+ +++NG CK+G ++ A+SLL+ +E+ + Y+++ID +
Sbjct: 212 MVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKN 271
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
N+A +L+ M GI P+V+ Y ++R L N GR +A ++ ++MI+R + P+ ++A
Sbjct: 272 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 331
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I F G+L A L+ E+ D T++ LI C + EA+ MF M
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 391
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKV 240
CFP+ VT+N LI G CKA ++DE LF +M V ++V+ +
Sbjct: 392 CFPNVVTYNTLIKGFCKAKRVDEGMELFREM-------------SQRGLVGNTVTYTTLI 438
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLS 300
+A + NA + Q+ GV+PDI TY+IL++ C G + A +F+ LQ +
Sbjct: 439 HGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKME 498
Query: 301 PDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSL 360
PD TY +I+G+ + + ED + + + +P+ Y +M+ CR A +L
Sbjct: 499 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADAL 558
Query: 361 YLEYLKSLPGRDNDSINAL 379
+ E + P D+ + N L
Sbjct: 559 FREMKEEGPLPDSGTYNTL 577
Score = 175 bits (443), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 123/434 (28%), Positives = 205/434 (47%), Gaps = 20/434 (4%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
++ D+ T N LLNGFC ++ +AVSL+ + G +++LI G F+ R +EA
Sbjct: 147 YEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAV 206
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
+L RM+ G PD++ Y I++ GL G + A+ + +M Q + P YN II
Sbjct: 207 ALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDAL 266
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
C+ ++ A +L E+ + T+ LI +C G +A + + M + P+
Sbjct: 267 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 326
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKMEIGKS--PSLFFRLAQGSDHVSDSVSLQKKVEHM 243
VTF+ALI+ K GKL EA L+ +M I +S P +F + +
Sbjct: 327 VTFSALIDAFVKEGKLVEAEKLYDEM-IKRSIDPDIF--------------TYSSLINGF 371
Query: 244 CEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDS 303
C + A + + P++ TYN LI FCKA ++ +LF+++ +GL ++
Sbjct: 372 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNT 431
Query: 304 VTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLE 363
VTY TLI G ++ ++A + M+ P Y L+ LC K+ A ++ E
Sbjct: 432 VTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVF-E 490
Query: 364 YL-KSLPGRDNDSINALEEYFMK-GEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAK 421
YL +S D + N + E K G+VE L + N+ Y+ ++ GFC+
Sbjct: 491 YLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKG 550
Query: 422 KVDEALIIFSVLDE 435
+EA +F + E
Sbjct: 551 LKEEADALFREMKE 564
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 112/458 (24%), Positives = 216/458 (47%), Gaps = 16/458 (3%)
Query: 10 LATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYG 69
+ F+ LL+ K K + +SL ++ G L YS LI+ F + + + A ++
Sbjct: 81 IVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLA 140
Query: 70 RMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIG 129
+M+K G PD++ +L G + R+ +AV + +M++ G PD+ +N +I G
Sbjct: 141 KMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHN 200
Query: 130 QLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFN 189
+ A +L + D T+ I++ +CK+G + A + +ME+ P V +N
Sbjct: 201 RASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYN 260
Query: 190 ALINGLCKAGKLDEAHLLFYKME-IGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQ 248
+I+ LC +++A LF +M+ G P++ V+ + +C G+
Sbjct: 261 TIIDALCNYKNVNDALNLFTEMDNKGIRPNV--------------VTYNSLIRCLCNYGR 306
Query: 249 TLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGT 308
+A +LL+ + + + P++ T++ LI++F K G + A KL+ ++ + + PD TY +
Sbjct: 307 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 366
Query: 309 LIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEY-LKS 367
LI+G +R ++A + + M+ C P+ Y L+ C+ K++ L+ E +
Sbjct: 367 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRG 426
Query: 368 LPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEAL 427
L G + +F E + A ++ ++ YSILL G C KV+ AL
Sbjct: 427 LVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETAL 486
Query: 428 IIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIF 465
++F L + + + +I G+C + D +F
Sbjct: 487 VVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 524
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 151/302 (50%), Gaps = 13/302 (4%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
++ T+N L+ C G+ +A LL + + +S+LID F K + EA LY
Sbjct: 290 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 349
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
MIK I PD+ Y+ ++ G R+ EA MF MI + P+ YN +IKGFC
Sbjct: 350 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 409
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
++D L E+S + +T T+T LI + AQ +F QM G P +T+
Sbjct: 410 KRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTY 469
Query: 189 NALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQ 248
+ L++GLC GK++ A ++F + Q S D + +E MC+AG+
Sbjct: 470 SILLDGLCNNGKVETALVVFEYL-------------QRSKMEPDIYTYNIMIEGMCKAGK 516
Query: 249 TLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGT 308
+ + L L+ GV P++ TY +++ FC+ G A LF++++ +G PDS TY T
Sbjct: 517 VEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNT 576
Query: 309 LI 310
LI
Sbjct: 577 LI 578
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 156/315 (49%), Gaps = 15/315 (4%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R+ ++ TF+ L++ F K+GKL EA L + + + YSSLI+GF R
Sbjct: 317 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 376
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+EA ++ MI P+V+ Y +++G RV E +++F EM QRGL+ + Y
Sbjct: 377 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I GF + D+A+ + ++ L D T++IL+ +C G V A +F +++
Sbjct: 437 LIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSK 496
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEI-GKSPSLFFRLAQGSDHVSDSVSLQKK 239
P T+N +I G+CKAGK+++ LF + + G P++ V+
Sbjct: 497 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV--------------VTYTTM 542
Query: 240 VEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGL 299
+ C G A L ++ + G +PD TYN LI + + G+ + +L ++++
Sbjct: 543 MSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRF 602
Query: 300 SPDSVTYGTLIDGLY 314
D+ T G + + L+
Sbjct: 603 VGDASTIGLVTNMLH 617
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/483 (23%), Positives = 205/483 (42%), Gaps = 52/483 (10%)
Query: 22 KQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVI 81
K G + S RD G+R Y + + ++A +L+G M+K P ++
Sbjct: 24 KCGTAPPSFSHCSFWVRDFSGVRYD-YRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIV 82
Query: 82 -----------------------------------LYAIMLRGLSNEGRVGEAVKMFAEM 106
Y+I++ ++ A+ + A+M
Sbjct: 83 EFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKM 142
Query: 107 IQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMV 166
++ G PD N+++ GFC ++ A SL ++ D+ T LI + +
Sbjct: 143 MKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRA 202
Query: 167 REAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGK-SPSLFFRLAQ 225
EA + ++M GC P VT+ ++NGLCK G +D A L KME GK P +
Sbjct: 203 SEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGV------ 256
Query: 226 GSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMN 285
V ++ +C +A L T++ + G+ P++ TYN LI C G +
Sbjct: 257 --------VIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS 308
Query: 286 GAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALM 345
A +L D+ + ++P+ VT+ LID + + +A K+ D M+K +P Y +L+
Sbjct: 309 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 368
Query: 346 TWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGE-VERAIRGLLELDFRFRD 404
C ++ A ++ + + + N L + F K + V+ + E+ R
Sbjct: 369 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLV 428
Query: 405 FNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVI 464
N Y+ L+ GF QA++ D A I+F + + + + L+ GLC + A+V+
Sbjct: 429 GNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVV 488
Query: 465 FLY 467
F Y
Sbjct: 489 FEY 491
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 151/346 (43%), Gaps = 39/346 (11%)
Query: 168 EAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKME-IGKSPSLFFRLAQG 226
+A +F M K FPS V F+ L++ + K K D L +M+ +G S +L+
Sbjct: 64 DAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY------ 117
Query: 227 SDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNG 286
+ + C Q A +L ++ G PDI T N L+N FC ++
Sbjct: 118 --------TYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISD 169
Query: 287 AFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMT 346
A L + G PDS T+ TLI GL+R R +A + D M+ C+P Y ++
Sbjct: 170 AVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVN 229
Query: 347 WLCRGKKISLAFSLY--LEYLKSLPGRD--NDSINALEEYFMKGEVERAIRGLLELDFRF 402
LC+ I LA SL +E K PG N I+AL Y V A+ E+D +
Sbjct: 230 GLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNY---KNVNDALNLFTEMDNKG 286
Query: 403 RDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISG------LCAKR 456
N+ Y+ L+ C + +A + S + E IN N + LI L
Sbjct: 287 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 346
Query: 457 NLYDAVV-------IFLY-SLDKGFELGPKI--CKELLECLLVSQD 492
LYD ++ IF Y SL GF + ++ K + E L++S+D
Sbjct: 347 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE-LMISKD 391
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 103/233 (44%), Gaps = 36/233 (15%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
++ T+N L+ GFCK +++E + L R + + G Y++LI GFF+AR + A ++
Sbjct: 395 NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVF 454
Query: 69 GRMIKGGILPDVILY-----------------------------------AIMLRGLSNE 93
+M+ G+LPD++ Y IM+ G+
Sbjct: 455 KQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKA 514
Query: 94 GRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTH 153
G+V + +F + +G+ P+ Y ++ GFC G + A +L E+ L D+ T+
Sbjct: 515 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTY 574
Query: 154 TILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHL 206
LI + G + E+ +M A T L+ + G+LD++ L
Sbjct: 575 NTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI-GLVTNMLHDGRLDKSFL 626
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 126/469 (26%), Positives = 230/469 (49%), Gaps = 18/469 (3%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D+ T+N L++ + +G +EEA L+ + G + Y+++I+G K +Y A ++
Sbjct: 269 DIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVF 328
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
M++ G+ PD Y +L +G V E K+F++M R ++PD C+++++ F
Sbjct: 329 AEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRS 388
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
G LD A + + D +TILI C+KGM+ A + N+M + GC VT+
Sbjct: 389 GNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTY 448
Query: 189 NALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQ 248
N +++GLCK L EA LF +M +LF DS +L ++ C+ G
Sbjct: 449 NTILHGLCKRKMLGEADKLFNEM---TERALF----------PDSYTLTILIDGHCKLGN 495
Query: 249 TLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGT 308
NA +L ++ + + D+ TYN L++ F K G+++ A +++ D+ K + P ++Y
Sbjct: 496 LQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSI 555
Query: 309 LIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSL 368
L++ L +AF++ D M+ +P+ + +++ CR S S + +
Sbjct: 556 LVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEG 615
Query: 369 PGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAP----YSILLIGFCQAKKVD 424
D S N L F++ E GL++ L P Y+ +L GFC+ ++
Sbjct: 616 FVPDCISYNTLIYGFVREENMSKAFGLVK-KMEEEQGGLVPDVFTYNSILHGFCRQNQMK 674
Query: 425 EALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGF 473
EA ++ + E +N + ++ +I+G ++ NL +A I L +GF
Sbjct: 675 EAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGF 723
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 111/477 (23%), Positives = 208/477 (43%), Gaps = 51/477 (10%)
Query: 11 ATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGR 70
+ F++L+ + + KL EA LL G + + ++LI + A +Y
Sbjct: 166 SVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQE 225
Query: 71 MIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQ 130
+ + G+ +V IM+ L +G++ + +++ ++G+ PD YN +I +
Sbjct: 226 ISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSS--- 282
Query: 131 LDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNA 190
KG++ EA E+ N M G P T+N
Sbjct: 283 --------------------------------KGLMEEAFELMNAMPGKGFSPGVYTYNT 310
Query: 191 LINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQT 249
+INGLCK GK + A +F +M G SP DS + + + C+ G
Sbjct: 311 VINGLCKHGKYERAKEVFAEMLRSGLSP--------------DSTTYRSLLMEACKKGDV 356
Query: 250 LNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTL 309
+ K+ + + VVPD+ ++ +++ F ++GN++ A F ++ GL PD+V Y L
Sbjct: 357 VETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTIL 416
Query: 310 IDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLP 369
I G R A +R+ ML+ C Y ++ LC+ K + A L+ E +
Sbjct: 417 IQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERAL 476
Query: 370 GRDNDSINALEEYFMK-GEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALI 428
D+ ++ L + K G ++ A+ ++ + ++ Y+ LL GF + +D A
Sbjct: 477 FPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKE 536
Query: 429 IFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKELLE 485
I++ + I P S L++ LC+K +L +A ++ + K + IC +++
Sbjct: 537 IWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIK 593
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 164/330 (49%), Gaps = 15/330 (4%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D + +L+ G+C++G + A++L + + G + + Y++++ G K + EA L+
Sbjct: 409 DNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLF 468
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
M + + PD I++ G G + A+++F +M ++ + D YN ++ GF +
Sbjct: 469 NEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKV 528
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
G +D A+ + ++ + L +++IL+ +C KG + EA ++++M P+ +
Sbjct: 529 GDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMIC 588
Query: 189 NALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQ 248
N++I G C++G + KM +++G V D +S +
Sbjct: 589 NSMIKGYCRSGNASDGESFLEKM-----------ISEG--FVPDCISYNTLIYGFVREEN 635
Query: 249 TLNAYKLLTQLADS--GVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTY 306
A+ L+ ++ + G+VPD+ TYN +++ FC+ M A + + + +G++PD TY
Sbjct: 636 MSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTY 695
Query: 307 GTLIDGLYRVEREEDAFKIRDHMLKHVCEP 336
+I+G + +AF+I D ML+ P
Sbjct: 696 TCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 5/221 (2%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLR-LLERDGRGIRLSGYSSLIDGFFKAR 59
M +R + D+ T+N LL+GF K G ++ A + ++ ++ +S YS L++
Sbjct: 506 MKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPIS-YSILVNALCSKG 564
Query: 60 RYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYN 119
EA ++ MI I P V++ M++G G + +MI G +PD YN
Sbjct: 565 HLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYN 624
Query: 120 AIIKGFCDIGQLDHARSLHVEISGHDG--LHDTCTHTILICEMCKKGMVREAQEMFNQME 177
+I GF + A L ++ G + D T+ ++ C++ ++EA+ + +M
Sbjct: 625 TLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI 684
Query: 178 KLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSP 217
+ G P T+ +ING L EA + +M + G SP
Sbjct: 685 ERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 62/111 (55%), Gaps = 2/111 (1%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGI--RLSGYSSLIDGFFKARRYNE 63
F D ++N L+ GF ++ + +A L++ +E + G+ + Y+S++ GF + + E
Sbjct: 616 FVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKE 675
Query: 64 AHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPD 114
A + +MI+ G+ PD Y M+ G ++ + EA ++ EM+QRG PD
Sbjct: 676 AEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 124/466 (26%), Positives = 225/466 (48%), Gaps = 14/466 (3%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M + + D+ T +++N +C++ KL A S+L + G +S+L++GF R
Sbjct: 96 MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGR 155
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+EA +L RM++ PD++ + ++ GL +GRV EA+ + M++ G PD Y
Sbjct: 156 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 215
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
++ C G A L ++ + ++I+I +CK G +A +FN+ME G
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKV 240
VT+++LI GLC GK D+ + +M G + + D V+ +
Sbjct: 276 IKADVVTYSSLIGGLCNDGKWDDGAKMLREM-------------IGRNIIPDVVTFSALI 322
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLS 300
+ + G+ L A +L ++ G+ PD TYN LI+ FCK ++ A ++F + KG
Sbjct: 323 DVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCE 382
Query: 301 PDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSL 360
PD VTY LI+ + +R +D ++ + P+ Y L+ C+ K++ A L
Sbjct: 383 PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKEL 442
Query: 361 YLEYL-KSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQ 419
+ E + + +P L+ GE+ +A+ ++ + Y+I++ G C
Sbjct: 443 FQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCN 502
Query: 420 AKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIF 465
A KVD+A +F L + + + + +I GLC K +L +A ++F
Sbjct: 503 ASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLF 548
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 105/186 (56%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
+ D+ T+++L+N +CK ++++ + L R + G Y++L+ GF ++ + N A
Sbjct: 382 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 441
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
L+ M+ G+ P V+ Y I+L GL + G + +A+++F +M + + YN II G C
Sbjct: 442 LFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMC 501
Query: 127 DIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAV 186
+ ++D A SL +S D T+ ++I +CKKG + EA +F +M++ GC P
Sbjct: 502 NASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDF 561
Query: 187 TFNALI 192
T+N LI
Sbjct: 562 TYNILI 567
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 144/541 (26%), Positives = 248/541 (45%), Gaps = 56/541 (10%)
Query: 12 TFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRM 71
T+N++L GFCK G LE+A +L + + L Y+ + G + ++ EA ++ +M
Sbjct: 293 TYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQM 352
Query: 72 IKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQL 131
GI P + Y I++ GL G + +A + M + G+ PDA Y ++ G+C +G++
Sbjct: 353 TDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKV 412
Query: 132 DHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNAL 191
D A+SL E+ ++ L + T IL+ + K G + EA+E+ +M + G VT N +
Sbjct: 413 DAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNII 472
Query: 192 INGLCKAGKLDEAHLLFYKMEIGKSPSL------FFRLAQGS----DHVSDSVSLQKKVE 241
++GLC +G+LD+A + M + S +L + L S + + D ++ +
Sbjct: 473 VDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLN 532
Query: 242 HMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSP 301
+C+AG+ A L ++ + PD YNI I+ FCK G ++ AF++ KD++ KG
Sbjct: 533 GLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHK 592
Query: 302 DSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLY 361
TY +LI GL + + + D M + P+ Y + +LC G+K+
Sbjct: 593 SLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVE------ 646
Query: 362 LEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAP----YSILLIGF 417
D+ N L+E K N+AP + L+ F
Sbjct: 647 ------------DATNLLDEMMQK--------------------NIAPNVFSFKYLIEAF 674
Query: 418 CQAKKVDEALIIFSVLDEFNININPTSCVHLI-SGLCAKRNLYDAVVIFLYSLDKGFELG 476
C+ D A +F +I L+ + L A L A + LD+GFELG
Sbjct: 675 CKVPDFDMAQEVFET--AVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELG 732
Query: 477 PKICKELLECLLVSQDKRKYAIDLIGRMKSRGYRLHKYQYRQTISLLQQLQEGKAVKLFS 536
+ K+L+E L +D+ + A ++ +M RGY I L ++ K F+
Sbjct: 733 TFLYKDLVES-LCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFA 791
Query: 537 E 537
+
Sbjct: 792 D 792
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 122/471 (25%), Positives = 214/471 (45%), Gaps = 46/471 (9%)
Query: 10 LATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYG 69
L ++N+ L G + GK EA ++L+ + G G + Y+ L+DG K ++A ++ G
Sbjct: 326 LQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVG 385
Query: 70 RMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIG 129
M + G+ PD + Y +L G + G+V A + EM++ LP+A+ N ++ +G
Sbjct: 386 LMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMG 445
Query: 130 QLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG--------- 180
++ A L +++ DT T I++ +C G + +A E+ M G
Sbjct: 446 RISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGN 505
Query: 181 --------------CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQG 226
C P +T++ L+NGLCKAG+ EA LF +M G
Sbjct: 506 SYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEM-------------MG 552
Query: 227 SDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNG 286
DSV+ + H C+ G+ +A+++L + G ++TYN LI +
Sbjct: 553 EKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFE 612
Query: 287 AFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMT 346
L +++ KG+SP+ TY T I L E+ EDA + D M++ P+ +K L+
Sbjct: 613 IHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIE 672
Query: 347 WLCRGKKISLAFSLYLEYLKSLPGRDNDSINAL-EEYFMKGEVERAIRGLLE--LDFRFR 403
C+ +A ++ E S+ G+ + + E G++ +A LLE LD R
Sbjct: 673 AFCKVPDFDMAQEVF-ETAVSICGQKEGLYSLMFNELLAAGQLLKATE-LLEAVLD---R 727
Query: 404 DFNLAP--YSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGL 452
F L Y L+ C+ +++ A I + + +P + + +I GL
Sbjct: 728 GFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGL 778
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/440 (25%), Positives = 197/440 (44%), Gaps = 62/440 (14%)
Query: 48 YSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMI 107
Y+ L++ K RR LY M+ GI P + +++R L + V A ++F EM
Sbjct: 115 YNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMP 174
Query: 108 QRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVR 167
++G P+ + +++G+C G D L + L + + ++ C++G
Sbjct: 175 EKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRND 234
Query: 168 EAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGK------------ 215
++++M +M + G P VTFN+ I+ LCK GK+ +A +F ME+ +
Sbjct: 235 DSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITY 294
Query: 216 ---------------SPSLFFRLAQGSDHV---SDSVSLQKKVEHMCEAGQTLNAYKLLT 257
+ +LF + + D S ++ LQ V H G+ + A +L
Sbjct: 295 NLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRH----GKFIEAETVLK 350
Query: 258 QLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVE 317
Q+ D G+ P I +YNIL++ CK G ++ A + ++ G+ PD+VTYG L+ G V
Sbjct: 351 QMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVG 410
Query: 318 REEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSIN 377
+ + A + M+++ C P+ L+ L + +IS A L + + G D + N
Sbjct: 411 KVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCN 470
Query: 378 ALEEYFM-KGEVERAIR---------------------GLLELDFRFRDFNLAP----YS 411
+ + GE+++AI GL +D + N P YS
Sbjct: 471 IIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGL--VDDSLIENNCLPDLITYS 528
Query: 412 ILLIGFCQAKKVDEALIIFS 431
LL G C+A + EA +F+
Sbjct: 529 TLLNGLCKAGRFAEAKNLFA 548
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/455 (23%), Positives = 199/455 (43%), Gaps = 30/455 (6%)
Query: 23 QGKLEEAVSLLR--LLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKGGIL--- 77
+ K+ E + L +L + +LS S++ F K+ ++A + ++++
Sbjct: 51 RAKMHEEIQELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQF-QLVRSRFPENK 109
Query: 78 PDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSL 137
P V LY ++L E RV ++ +M+ G+ P + +N +I+ CD +D AR L
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 138 HVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCK 197
E+ + T IL+ CK G+ + E+ N ME G P+ V +N +++ C+
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 198 AGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLL 256
G+ D++ + KM E G P D V+ ++ +C+ G+ L+A ++
Sbjct: 230 EGRNDDSEKMVEKMREEGLVP--------------DIVTFNSRISALCKEGKVLDASRIF 275
Query: 257 TQLADSGVV----PDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDG 312
+ + + P+ TYN+++ FCK G + A LF+ ++ +Y + G
Sbjct: 276 SDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQG 335
Query: 313 LYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRD 372
L R + +A + M PS Y LM LC+ +S A ++ L G
Sbjct: 336 LVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIV--GLMKRNGVC 393
Query: 373 NDSIN---ALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALII 429
D++ L Y G+V+ A L E+ N +ILL + ++ EA +
Sbjct: 394 PDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEEL 453
Query: 430 FSVLDEFNININPTSCVHLISGLCAKRNLYDAVVI 464
++E ++ +C ++ GLC L A+ I
Sbjct: 454 LRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEI 488
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 170/378 (44%), Gaps = 49/378 (12%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D T+ LL+G+C GK++ A SLL+ + R+ + L+ +K R +EA L
Sbjct: 395 DAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELL 454
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEM---------------------- 106
+M + G D + I++ GL G + +A+++ M
Sbjct: 455 RKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDS 514
Query: 107 -IQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGM 165
I+ LPD Y+ ++ G C G+ A++L E+ G D+ + I I CK+G
Sbjct: 515 LIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGK 574
Query: 166 VREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLA 224
+ A + MEK GC S T+N+LI GL ++ E H L +M E G SP++
Sbjct: 575 ISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNI----- 629
Query: 225 QGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNM 284
+ ++++CE + +A LL ++ + P++ ++ LI +FCK +
Sbjct: 630 ---------CTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDF 680
Query: 285 NGAFKLFKDL-----QLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFA 339
+ A ++F+ Q +GL Y + + L + A ++ + +L E
Sbjct: 681 DMAQEVFETAVSICGQKEGL------YSLMFNELLAAGQLLKATELLEAVLDRGFELGTF 734
Query: 340 VYKALMTWLCRGKKISLA 357
+YK L+ LC+ ++ +A
Sbjct: 735 LYKDLVESLCKKDELEVA 752
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 163/349 (46%), Gaps = 43/349 (12%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D T N++++G C G+L++A+ +++ G+R+ G ++L N +S
Sbjct: 465 DTVTCNIIVDGLCGSGELDKAIEIVK-------GMRVHGSAAL---------GNLGNSYI 508
Query: 69 G----RMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKG 124
G +I+ LPD+I Y+ +L GL GR EA +FAEM+ L PD+ YN I
Sbjct: 509 GLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHH 568
Query: 125 FCDIGQLDHARSLHVEISGHDGLHDTC-THTILICEMCKKGMVREAQEMFNQMEKLGCFP 183
FC G++ A + ++ G H + T+ LI + K + E + ++M++ G P
Sbjct: 569 FCKQGKISSAFRVLKDME-KKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISP 627
Query: 184 SAVTFNALINGLCKAGKLDEA-HLLFYKMEIGKSPSLF--------------FRLAQGSD 228
+ T+N I LC+ K+++A +LL M+ +P++F F +AQ
Sbjct: 628 NICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVF 687
Query: 229 HVSDSVSLQKK------VEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAG 282
+ S+ QK+ + AGQ L A +LL + D G Y L+ S CK
Sbjct: 688 ETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKD 747
Query: 283 NMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLK 331
+ A + + +G D +IDGL ++ +++A D M++
Sbjct: 748 ELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMME 796
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 119/261 (45%), Gaps = 15/261 (5%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M + Q D +N+ ++ FCKQGK+ A +L+ +E+ G L Y+SLI G +
Sbjct: 550 MMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQ 609
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
E H L M + GI P++ Y ++ L +V +A + EM+Q+ + P+ +
Sbjct: 610 IFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKY 669
Query: 121 IIKGFCDIGQLDHARSL---HVEISGH-DGLHDTCTHTILICEMCKKGMVREAQEMFNQM 176
+I+ FC + D A+ + V I G +GL ++++ E+ G + +A E+ +
Sbjct: 670 LIEAFCKVPDFDMAQEVFETAVSICGQKEGL-----YSLMFNELLAAGQLLKATELLEAV 724
Query: 177 EKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM---EIGKSPSLFFRLAQGSDHVS-- 231
G + L+ LCK +L+ A + +KM G P+ + G +
Sbjct: 725 LDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNK 784
Query: 232 -DSVSLQKKVEHMCEAGQTLN 251
++ S K+ M G+ N
Sbjct: 785 KEANSFADKMMEMASVGEVAN 805
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 109/345 (31%), Positives = 182/345 (52%), Gaps = 13/345 (3%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
F+ + T LLNGFC+ + +EAVSL+ ++ G + Y+++I+G K R N A
Sbjct: 145 FRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNAL 204
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
++ M K GI D + Y ++ GLSN GR +A ++ +M++R + P+ + A+I F
Sbjct: 205 EVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTF 264
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
G L AR+L+ E+ + + T+ LI C G + +A+ MF+ M GCFP
Sbjct: 265 VKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDV 324
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCE 245
VT+N LI G CK+ ++++ LF +M QG V D+ + + C+
Sbjct: 325 VTYNTLITGFCKSKRVEDGMKLFCEMTY-----------QGL--VGDAFTYNTLIHGYCQ 371
Query: 246 AGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVT 305
AG+ A K+ ++ D GV PDI TYNIL++ C G + A + +DLQ + D +T
Sbjct: 372 AGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIIT 431
Query: 306 YGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCR 350
Y +I GL R ++ ++A+ + + + +P Y +++ LCR
Sbjct: 432 YNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCR 476
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 146/306 (47%), Gaps = 13/306 (4%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M + + D T+N L++G G+ +A LLR + + + +++LID F K
Sbjct: 210 MEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGN 269
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
EA +LY MI+ ++P+V Y ++ G G +G+A MF M+ +G PD YN
Sbjct: 270 LLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNT 329
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I GFC +++ L E++ + D T+ LI C+ G + AQ++FN+M G
Sbjct: 330 LITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 389
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKV 240
P VT+N L++ LC GK+++A ++ + Q S+ D ++ +
Sbjct: 390 VSPDIVTYNILLDCLCNNGKIEKALVMVEDL-------------QKSEMDVDIITYNIII 436
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLS 300
+ +C + A+ L L GV PD Y +I+ C+ G A KL + ++ G
Sbjct: 437 QGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFM 496
Query: 301 PDSVTY 306
P Y
Sbjct: 497 PSERIY 502
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 121/457 (26%), Positives = 192/457 (42%), Gaps = 51/457 (11%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R + F +L K K + + L +E G L ++ LI F + R
Sbjct: 70 MLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSR 129
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+ A +L G+M+K G P ++ +L G R EAV + M G +P+ YN
Sbjct: 130 LSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNT 189
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I G +CK + A E+F MEK G
Sbjct: 190 VING-----------------------------------LCKNRDLNNALEVFYCMEKKG 214
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGK-SPSLFFRLAQGSDHVSDSVSLQKK 239
AVT+N LI+GL +G+ +A L M K P++ F A
Sbjct: 215 IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTAL-------------- 260
Query: 240 VEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGL 299
++ + G L A L ++ VVP++ TYN LIN FC G + A +F + KG
Sbjct: 261 IDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGC 320
Query: 300 SPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFS 359
PD VTY TLI G + +R ED K+ M Y L+ C+ K+++A
Sbjct: 321 FPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQK 380
Query: 360 LYLEYLKSLPGRDNDSINALEEYFMK-GEVERAIRGLLELDFRFRDFNLAPYSILLIGFC 418
++ + D + N L + G++E+A+ + +L D ++ Y+I++ G C
Sbjct: 381 VFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLC 440
Query: 419 QAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAK 455
+ K+ EA +F L + + + + +ISGLC K
Sbjct: 441 RTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRK 477
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 130/273 (47%), Gaps = 15/273 (5%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R+ ++ F L++ F K+G L EA +L + + R + Y+SLI+GF
Sbjct: 245 MVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGC 304
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+A ++ M+ G PDV+ Y ++ G RV + +K+F EM +GL+ DA YN
Sbjct: 305 LGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNT 364
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I G+C G+L+ A+ + + D T+ IL+ +C G + +A M ++K
Sbjct: 365 LIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSE 424
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKK 239
+T+N +I GLC+ KL EA LF + G P D+++
Sbjct: 425 MDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKP--------------DAIAYITM 470
Query: 240 VEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYN 272
+ +C G A KL ++ + G +P + Y+
Sbjct: 471 ISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 503
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 161/398 (40%), Gaps = 63/398 (15%)
Query: 98 EAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILI 157
+A +F EM+Q +P + ++ + + D L+ ++ HD + TILI
Sbjct: 62 DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILI 121
Query: 158 CEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSP 217
C+ + A + +M KLG PS VT +L+NG
Sbjct: 122 HCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGF---------------------- 159
Query: 218 SLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINS 277
C+ + A L+ + G VP++ YN +IN
Sbjct: 160 --------------------------CQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVING 193
Query: 278 FCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPS 337
CK ++N A ++F ++ KG+ D+VTY TLI GL R DA ++ M+K +P+
Sbjct: 194 LCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPN 253
Query: 338 FAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLE 397
+ AL+ + + A +LY E ++ + + N+L F + + +
Sbjct: 254 VIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFD 313
Query: 398 LDFRFRDF-NLAPYSILLIGFCQAKKVDEALIIFS-------VLDEFNININPTSCVHLI 449
L F ++ Y+ L+ GFC++K+V++ + +F V D F N LI
Sbjct: 314 LMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNT-------LI 366
Query: 450 SGLCAKRNLYDAVVIFLYSLDKGFELGPKICKELLECL 487
G C L A +F +D G LL+CL
Sbjct: 367 HGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCL 404
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 68/133 (51%), Gaps = 8/133 (6%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D+ T+N+LL+ C GK+E+A+ ++ L++ + + Y+ +I G + + EA L+
Sbjct: 393 DIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLF 452
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
+ + G+ PD I Y M+ GL +G EA K+ M + G +P Y+ ++
Sbjct: 453 RSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLR----- 507
Query: 129 GQLDHARSLHVEI 141
DH SL E+
Sbjct: 508 ---DHYTSLSAEL 517
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/369 (30%), Positives = 189/369 (51%), Gaps = 20/369 (5%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
F+ D+ TF L+NGFC ++EEA+S++ + G + Y+++ID K N A
Sbjct: 138 FEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYAL 197
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
SL+ +M GI PDV++Y ++ GL N GR +A + M +R + PD +NA+I F
Sbjct: 198 SLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAF 257
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
G+ A L+ E+ + T+T LI C +G V EA++MF ME GCFP
Sbjct: 258 VKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDV 317
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCE 245
V + +LING CK K+D+A +FY+M ++++ ++ +
Sbjct: 318 VAYTSLINGFCKCKKVDDAMKIFYEM-------------SQKGLTGNTITYTTLIQGFGQ 364
Query: 246 AGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQ---LKGLSPD 302
G+ A ++ + + GV P+I+TYN+L++ C G + A +F+D+Q + G++P+
Sbjct: 365 VGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPN 424
Query: 303 SVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYL 362
TY L+ GL + E A + + M K + Y ++ +C+ K+ A +L+
Sbjct: 425 IWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFC 484
Query: 363 EYLKSLPGR 371
SLP +
Sbjct: 485 ----SLPSK 489
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/464 (25%), Positives = 205/464 (44%), Gaps = 79/464 (17%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
DL T N+L+N FC+ + A S L + + G + ++SLI+GF R EA S+
Sbjct: 106 DLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMV 165
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
+M++ GI PDV++Y ++ L G V A+ +F +M G+ PD Y +++ G C+
Sbjct: 166 NQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNS 225
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
G+ A SL ++ D T LI K+G +A+E++N+M ++ P+ T+
Sbjct: 226 GRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTY 285
Query: 189 NALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQ 248
+LING C G +DE
Sbjct: 286 TSLINGFCMEGCVDE--------------------------------------------- 300
Query: 249 TLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGT 308
A ++ + G PD+ Y LIN FCK ++ A K+F ++ KGL+ +++TY T
Sbjct: 301 ---ARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTT 357
Query: 309 LIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSL 368
LI G +V + A ++ HM+ P+ Y L+ LC K+ A ++ + +
Sbjct: 358 LIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF----EDM 413
Query: 369 PGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALI 428
R+ D + N+ Y++LL G C K+++AL+
Sbjct: 414 QKREMDGVAP---------------------------NIWTYNVLLHGLCYNGKLEKALM 446
Query: 429 IFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKG 472
+F + + ++I + +I G+C + +AV +F KG
Sbjct: 447 VFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKG 490
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 123/462 (26%), Positives = 215/462 (46%), Gaps = 27/462 (5%)
Query: 13 FNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMI 72
F LLN K K + ++L L+ G L + L++ F ++ + A S G+M+
Sbjct: 75 FTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMM 134
Query: 73 KGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLD 132
K G PD++ + ++ G R+ EA+ M +M++ G+ PD Y II C G ++
Sbjct: 135 KLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVN 194
Query: 133 HARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALI 192
+A SL ++ + D +T L+ +C G R+A + M K P +TFNALI
Sbjct: 195 YALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALI 254
Query: 193 NGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLN 251
+ K GK +A L+ +M + +P++F + + C G
Sbjct: 255 DAFVKEGKFLDAEELYNEMIRMSIAPNIF--------------TYTSLINGFCMEGCVDE 300
Query: 252 AYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLID 311
A ++ + G PD+ Y LIN FCK ++ A K+F ++ KGL+ +++TY TLI
Sbjct: 301 ARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQ 360
Query: 312 GLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGR 371
G +V + A ++ HM+ P+ Y L+ LC K+ A ++ + + R
Sbjct: 361 GFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF----EDMQKR 416
Query: 372 DNDSINA--------LEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKV 423
+ D + L G++E+A+ ++ R D + Y+I++ G C+A KV
Sbjct: 417 EMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKV 476
Query: 424 DEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIF 465
A+ +F L + N + +ISGL + ++A V+F
Sbjct: 477 KNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLF 518
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 153/306 (50%), Gaps = 22/306 (7%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R+ + D+ TFN L++ F K+GK +A L + R + Y+SLI+GF
Sbjct: 238 MTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGC 297
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+EA ++ M G PDV+ Y ++ G +V +A+K+F EM Q+GL + Y
Sbjct: 298 VDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTT 357
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKL- 179
+I+GF +G+ + A+ + + + T+ +L+ +C G V++A +F M+K
Sbjct: 358 LIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKRE 417
Query: 180 --GCFPSAVTFNALINGLCKAGKLDEAHLLFYKM---EIGKSPSLFFRLAQGSDHVSDSV 234
G P+ T+N L++GLC GKL++A ++F M E+ + + QG
Sbjct: 418 MDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQG-------- 469
Query: 235 SLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDL 294
MC+AG+ NA L L GV P++ TY +I+ + G + A LF+ +
Sbjct: 470 --------MCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
Query: 295 QLKGLS 300
+ G+S
Sbjct: 522 KEDGVS 527
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 134/515 (26%), Positives = 239/515 (46%), Gaps = 59/515 (11%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D T+ ++ CK +L+EAV + LE++ R Y+++I G+ A +++EA+SL
Sbjct: 272 DEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLL 331
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
R G +P VI Y +L L G+V EA+K+F EM ++ P+ YN +I C
Sbjct: 332 ERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRA 390
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
G+LD A L + + T I++ +CK + EA MF +M+ C P +TF
Sbjct: 391 GKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITF 450
Query: 189 NALINGLCKAGKLDEAHLLF----------------------------------YKMEIG 214
+LI+GL K G++D+A+ ++ YK I
Sbjct: 451 CSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMIN 510
Query: 215 K--SPSL---------------------FFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLN 251
+ SP L F + V D+ S + + +AG
Sbjct: 511 QNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANE 570
Query: 252 AYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLID 311
Y+L + + G V D + YNI+I+ FCK G +N A++L ++++ KG P VTYG++ID
Sbjct: 571 TYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVID 630
Query: 312 GLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGR 371
GL +++R ++A+ + + E + +Y +L+ + +I A+ + E ++
Sbjct: 631 GLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTP 690
Query: 372 DNDSINALEEYFMKGE-VERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIF 430
+ + N+L + +K E + A+ + N Y IL+ G C+ +K ++A + +
Sbjct: 691 NLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFW 750
Query: 431 SVLDEFNININPTSCVHLISGLCAKRNLYDAVVIF 465
+ + + + S +ISGL N+ +A +F
Sbjct: 751 QEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALF 785
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/480 (26%), Positives = 219/480 (45%), Gaps = 26/480 (5%)
Query: 19 GFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKGGILP 78
G K KL E +++++ + S Y++LI F + +L+ +M + G P
Sbjct: 142 GCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEP 201
Query: 79 DVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLH 138
V L+ ++RG + EGRV A+ + EM L D YN I F +G++D A
Sbjct: 202 TVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFF 261
Query: 139 VEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKA 198
EI + D T+T +I +CK + EA EMF +EK P +N +I G A
Sbjct: 262 HEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSA 321
Query: 199 GKLDEAHLLFYKMEI-GKSPSLF--------FRLAQGSDHVSDSVSLQKK---------- 239
GK DEA+ L + G PS+ R D KK
Sbjct: 322 GKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYN 381
Query: 240 --VEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLK 297
++ +C AG+ A++L + +G+ P+++T NI+++ CK+ ++ A +F+++ K
Sbjct: 382 ILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYK 441
Query: 298 GLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLA 357
+PD +T+ +LIDGL +V R +DA+K+ + ML C + VY +L+ +
Sbjct: 442 VCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDG 501
Query: 358 FSLYLEYLKSLPGRDNDSINA-LEEYFMKGEVERAIRGLLELDFRFRDF--NLAPYSILL 414
+Y + + D +N ++ F GE E+ R + E + + R F + YSIL+
Sbjct: 502 HKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKG-RAMFE-EIKARRFVPDARSYSILI 559
Query: 415 IGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFE 474
G +A +E +F + E ++ + +I G C + A + KGFE
Sbjct: 560 HGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFE 619
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 183/379 (48%), Gaps = 15/379 (3%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLL-RLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSL 67
D TF L++G K G++++A + ++L+ D R + Y+SLI FF R + H +
Sbjct: 446 DEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIV-YTSLIKNFFNHGRKEDGHKI 504
Query: 68 YGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCD 127
Y MI PD+ L + + G + MF E+ R +PDA Y+ +I G
Sbjct: 505 YKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIK 564
Query: 128 IGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVT 187
G + L + + DT + I+I CK G V +A ++ +M+ G P+ VT
Sbjct: 565 AGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVT 624
Query: 188 FNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAG 247
+ ++I+GL K +LDEA++LF E KS + + V ++ + G
Sbjct: 625 YGSVIDGLAKIDRLDEAYMLF---EEAKSKRIELNV----------VIYSSLIDGFGKVG 671
Query: 248 QTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYG 307
+ AY +L +L G+ P++ T+N L+++ KA +N A F+ ++ +P+ VTYG
Sbjct: 672 RIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYG 731
Query: 308 TLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKS 367
LI+GL +V + AF M K +PS Y +++ L + I+ A +L+ + +
Sbjct: 732 ILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKAN 791
Query: 368 LPGRDNDSINALEEYFMKG 386
D+ NA+ E G
Sbjct: 792 GGVPDSACYNAMIEGLSNG 810
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 151/320 (47%), Gaps = 15/320 (4%)
Query: 4 RRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNE 63
RRF D ++++L++G K G E L ++ G + Y+ +IDGF K + N+
Sbjct: 546 RRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNK 605
Query: 64 AHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIK 123
A+ L M G P V+ Y ++ GL+ R+ EA +F E + + + Y+++I
Sbjct: 606 AYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLID 665
Query: 124 GFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFP 183
GF +G++D A + E+ + T L+ + K + EA F M++L C P
Sbjct: 666 GFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTP 725
Query: 184 SAVTFNALINGLCKAGKLDEAHLLFYKME-IGKSPSLFFRLAQGSDHVSDSVSLQKKVEH 242
+ VT+ LINGLCK K ++A + + +M+ G PS ++S +
Sbjct: 726 NQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPS--------------TISYTTMISG 771
Query: 243 MCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPD 302
+ +AG A L + +G VPD YN +I AF LF++ + +GL
Sbjct: 772 LAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIH 831
Query: 303 SVTYGTLIDGLYRVEREEDA 322
+ T L+D L++ + E A
Sbjct: 832 NKTCVVLLDTLHKNDCLEQA 851
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 96/204 (47%)
Query: 4 RRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNE 63
+R + ++ ++ L++GF K G+++EA +L L + G L ++SL+D KA NE
Sbjct: 651 KRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINE 710
Query: 64 AHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIK 123
A + M + P+ + Y I++ GL + +A + EM ++G+ P Y +I
Sbjct: 711 ALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMIS 770
Query: 124 GFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFP 183
G G + A +L + G+ D+ + +I + +A +F + + G
Sbjct: 771 GLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPI 830
Query: 184 SAVTFNALINGLCKAGKLDEAHLL 207
T L++ L K L++A ++
Sbjct: 831 HNKTCVVLLDTLHKNDCLEQAAIV 854
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 140/525 (26%), Positives = 241/525 (45%), Gaps = 58/525 (11%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
++ D FN LLNG C + ++ EA+ L+ + G L ++L++G + ++A
Sbjct: 154 YEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAV 213
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
L RM++ G P+ + Y +L + G+ A+++ +M +R + DA Y+ II G
Sbjct: 214 VLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
C G LD+A +L E+ D T+ LI C G + ++ M K P+
Sbjct: 274 CKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNV 333
Query: 186 VTFNALINGLCKAGKLDEA-HLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMC 244
VTF+ LI+ K GKL EA LL M+ G +P ++++ ++ C
Sbjct: 334 VTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP--------------NTITYNSLIDGFC 379
Query: 245 EAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSV 304
+ + A +++ + G PDI T+NILIN +CKA ++ +LF+++ L+G+ ++V
Sbjct: 380 KENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTV 439
Query: 305 TYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEY 364
TY TL+ G + + E A K+ M+ P YK L+ LC
Sbjct: 440 TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLC--------------- 484
Query: 365 LKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVD 424
DN GE+E+A+ +++ + ++ Y I++ G C A KVD
Sbjct: 485 -------DN------------GELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVD 525
Query: 425 EALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKELL 484
+A +F L + ++ + +IS LC K +L A ++F ++G P EL
Sbjct: 526 DAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGH--AP---DELT 580
Query: 485 ECLLV----SQDKRKYAIDLIGRMKSRGYRLHKYQYRQTISLLQQ 525
+L+ D A +LI MKS G+ + I++L
Sbjct: 581 YNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSS 625
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 167/333 (50%), Gaps = 24/333 (7%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R + D ++++++G CK G L+ A +L +E G + Y++LI GF A R
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGR 313
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+++ L MIK I P+V+ +++++ EG++ EA ++ EM+QRG+ P+ YN+
Sbjct: 314 WDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNS 373
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLH-DTCTHTILICEMCKKGMVREAQEMFNQMEKL 179
+I GFC +L+ A + V++ G D T ILI CK + + E+F +M
Sbjct: 374 LIDGFCKENRLEEAIQM-VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLR 432
Query: 180 GCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKK 239
G + VT+N L+ G C++GKL+ A LF +M + D + D+ L+K
Sbjct: 433 GVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKA 492
Query: 240 VE----------------------HMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINS 277
+E MC A + +A+ L L GV D + YNI+I+
Sbjct: 493 LEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISE 552
Query: 278 FCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLI 310
C+ +++ A LF+ + +G +PD +TY LI
Sbjct: 553 LCRKDSLSKADILFRKMTEEGHAPDELTYNILI 585
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 126/530 (23%), Positives = 238/530 (44%), Gaps = 54/530 (10%)
Query: 25 KLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYA 84
K ++AV L R + + + ++ L K ++Y +L +M GI + +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 85 IMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC----------------DI 128
IM+ ++ A ++++ G PD +N ++ G C ++
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 129 GQLDHARSLHVEISGH-------------DGLHDT------CTHTILICEMCKKGMVREA 169
G +L+ ++G D + +T T+ ++ MCK G A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 170 QEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDH 229
E+ +ME+ AV ++ +I+GLCK G LD A LF +MEI
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI-------------KGF 294
Query: 230 VSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFK 289
+D ++ + C AG+ + KLL + + P++ T+++LI+SF K G + A +
Sbjct: 295 KADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQ 354
Query: 290 LFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLC 349
L K++ +G++P+++TY +LIDG + R E+A ++ D M+ C+P + L+ C
Sbjct: 355 LLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYC 414
Query: 350 RGKKISLAFSLYLEYLKSLPGRDNDSI--NALEEYFMK-GEVERAIRGLLELDFRFRDFN 406
+ +I L+ E SL G +++ N L + F + G++E A + E+ R +
Sbjct: 415 KANRIDDGLELFREM--SLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPD 472
Query: 407 LAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFL 466
+ Y ILL G C ++++AL IF +++ + ++ + +I G+C + DA +F
Sbjct: 473 IVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFC 532
Query: 467 YSLDKGFELGPKICKELLECLLVSQDKRKYAIDLIGRMKSRGYRLHKYQY 516
KG +L + ++ L +D A L +M G+ + Y
Sbjct: 533 SLPLKGVKLDAR-AYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTY 581
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 156/313 (49%), Gaps = 13/313 (4%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R+ ++ TF+VL++ F K+GKL EA LL+ + + G Y+SLIDGF K R
Sbjct: 324 MIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENR 383
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
EA + MI G PD++ + I++ G R+ + +++F EM RG++ + YN
Sbjct: 384 LEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNT 443
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+++GFC G+L+ A+ L E+ D ++ IL+ +C G + +A E+F ++EK
Sbjct: 444 LVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSK 503
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKV 240
+ +I+G+C A K+D+A LF + + K L D+ + +
Sbjct: 504 MELDIGIYMIIIHGMCNASKVDDAWDLFCSLPL-KGVKL------------DARAYNIMI 550
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLS 300
+C A L ++ + G PD TYNILI + + A +L ++++ G
Sbjct: 551 SELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFP 610
Query: 301 PDSVTYGTLIDGL 313
D T +I+ L
Sbjct: 611 ADVSTVKMVINML 623
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 147/289 (50%), Gaps = 16/289 (5%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R + T+N L++GFCK+ +LEEA+ ++ L+ G + ++ LI+G+ KA R
Sbjct: 359 MMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR 418
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
++ L+ M G++ + + Y +++G G++ A K+F EM+ R + PD Y
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
++ G CD G+L+ A + +I D + I+I MC V +A ++F + G
Sbjct: 479 LLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKG 538
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKK 239
A +N +I+ LC+ L +A +LF KM E G +P D ++ ++ ++
Sbjct: 539 VKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAP----------DELTYNILIRA- 587
Query: 240 VEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAF 288
H+ + T A +L+ ++ SG D+ T ++IN +G ++ +F
Sbjct: 588 --HLGDDDAT-TAAELIEEMKSSGFPADVSTVKMVINML-SSGELDKSF 632
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 115/270 (42%), Gaps = 8/270 (2%)
Query: 255 LLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLY 314
L Q+ G+ I T +I+IN FC+ ++ AF + G PD+V + TL++GL
Sbjct: 110 LCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLC 169
Query: 315 RVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDND 374
R +A ++ D M++ +P+ L+ LC K+S A L +++ G +
Sbjct: 170 LECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVET--GFQPN 227
Query: 375 SIN---ALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFS 431
+ L G+ A+ L +++ R + YSI++ G C+ +D A +F+
Sbjct: 228 EVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFN 287
Query: 432 VLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICK-ELLECLLVS 490
++ + + LI G C D + + + ++ P + +L V
Sbjct: 288 EMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR--KISPNVVTFSVLIDSFVK 345
Query: 491 QDKRKYAIDLIGRMKSRGYRLHKYQYRQTI 520
+ K + A L+ M RG + Y I
Sbjct: 346 EGKLREADQLLKEMMQRGIAPNTITYNSLI 375
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 124/472 (26%), Positives = 226/472 (47%), Gaps = 27/472 (5%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D++TFNVL+ C+ +L A+ +L + G +++++ G+ + + A +
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIR 247
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMI-QRGLLPDAHCYNAIIKGFCD 127
+M++ G + +++ G EGRV +A+ EM Q G PD + +N ++ G C
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCK 307
Query: 128 IGQLDHARSLHVEI------SGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGC 181
G + HA +EI G+D D T+ +I +CK G V+EA E+ +QM C
Sbjct: 308 AGHVKHA----IEIMDVMLQEGYD--PDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDC 361
Query: 182 FPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVE 241
P+ VT+N LI+ LCK +++EA L R+ + D + ++
Sbjct: 362 SPNTVTYNTLISTLCKENQVEEATELA-------------RVLTSKGILPDVCTFNSLIQ 408
Query: 242 HMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSP 301
+C A +L ++ G PD TYN+LI+S C G ++ A + K ++L G +
Sbjct: 409 GLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCAR 468
Query: 302 DSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLY 361
+TY TLIDG + + +A +I D M H + Y L+ LC+ +++ A L
Sbjct: 469 SVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLM 528
Query: 362 LEYLKSLPGRDNDSINALEEYFMK-GEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQA 420
+ + D + N+L +F + G++++A + + + ++ Y L+ G C+A
Sbjct: 529 DQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKA 588
Query: 421 KKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKG 472
+V+ A + + IN+ P + +I GL KR +A+ +F L++
Sbjct: 589 GRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQN 640
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 116/363 (31%), Positives = 186/363 (51%), Gaps = 17/363 (4%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
F D TFN L+NG CK G ++ A+ ++ ++ ++G + Y+S+I G K EA
Sbjct: 291 FFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAV 350
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
+ +MI P+ + Y ++ L E +V EA ++ + +G+LPD +N++I+G
Sbjct: 351 EVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 410
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
C A L E+ D T+ +LI +C KG + EA M QME GC S
Sbjct: 411 CLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSV 470
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKMEI-GKSPSLFFRLAQGSDHVSDSVSLQKKVEHMC 244
+T+N LI+G CKA K EA +F +ME+ G S +SV+ ++ +C
Sbjct: 471 ITYNTLIDGFCKANKTREAEEIFDEMEVHGVS--------------RNSVTYNTLIDGLC 516
Query: 245 EAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSV 304
++ + +A +L+ Q+ G PD TYN L+ FC+ G++ A + + + G PD V
Sbjct: 517 KSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIV 576
Query: 305 TYGTLIDGLYRVEREEDAFK-IRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLE 363
TYGTLI GL + R E A K +R +K + A Y ++ L R +K + A +L+ E
Sbjct: 577 TYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHA-YNPVIQGLFRKRKTTEAINLFRE 635
Query: 364 YLK 366
L+
Sbjct: 636 MLE 638
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 126/518 (24%), Positives = 229/518 (44%), Gaps = 15/518 (2%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
F + A + +L + G ++ +L ++ + S + LI+ + + +E
Sbjct: 79 FSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEIL 138
Query: 66 SLYGRMI-KGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKG 124
S+ MI + G+ PD Y ML L + + A+M G+ PD +N +IK
Sbjct: 139 SVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKA 198
Query: 125 FCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPS 184
C QL A + ++ + + D T T ++ ++G + A + QM + GC S
Sbjct: 199 LCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWS 258
Query: 185 AVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMC 244
V+ N +++G CK G++++A L + E+ F D + V +C
Sbjct: 259 NVSVNVIVHGFCKEGRVEDA--LNFIQEMSNQDGFF----------PDQYTFNTLVNGLC 306
Query: 245 EAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSV 304
+AG +A +++ + G PD+ TYN +I+ CK G + A ++ + + SP++V
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTV 366
Query: 305 TYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEY 364
TY TLI L + + E+A ++ + P + +L+ LC + +A L+ E
Sbjct: 367 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM 426
Query: 365 LKSLPGRDNDSINAL-EEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKV 423
D + N L + KG+++ A+ L +++ ++ Y+ L+ GFC+A K
Sbjct: 427 RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKT 486
Query: 424 DEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKEL 483
EA IF ++ ++ N + LI GLC R + DA + + +G + L
Sbjct: 487 REAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSL 546
Query: 484 LECLLVSQDKRKYAIDLIGRMKSRGYRLHKYQYRQTIS 521
L D +K A D++ M S G Y IS
Sbjct: 547 LTHFCRGGDIKK-AADIVQAMTSNGCEPDIVTYGTLIS 583
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 142/314 (45%), Gaps = 14/314 (4%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R + T+N L++ CK+ ++EEA L R+L G + ++SLI G R
Sbjct: 356 MITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRN 415
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+ A L+ M G PD Y +++ L ++G++ EA+ M +M G YN
Sbjct: 416 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNT 475
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I GFC + A + E+ H ++ T+ LI +CK V +A ++ +QM G
Sbjct: 476 LIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG 535
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKV 240
P T+N+L+ C+ G + +A + M + G + D V+ +
Sbjct: 536 QKPDKYTYNSLLTHFCRGGDIKKAADIVQAMT-----------SNGCE--PDIVTYGTLI 582
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKD-LQLKGL 299
+C+AG+ A KLL + G+ YN +I + A LF++ L+
Sbjct: 583 SGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEA 642
Query: 300 SPDSVTYGTLIDGL 313
PD+V+Y + GL
Sbjct: 643 PPDAVSYRIVFRGL 656
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 152/320 (47%), Gaps = 19/320 (5%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
+ D T+N+L++ C +GKL+EA+++L+ +E G + Y++LIDGF KA + EA
Sbjct: 432 EPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEE 491
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
++ M G+ + + Y ++ GL RV +A ++ +MI G PD + YN+++ FC
Sbjct: 492 IFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFC 551
Query: 127 DIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAV 186
G + A + ++ + D T+ LI +CK G V A ++ ++ G +
Sbjct: 552 RGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPH 611
Query: 187 TFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCE 245
+N +I GL + K EA LF +M E ++P D+VS + +C
Sbjct: 612 AYNPVIQGLFRKRKTTEAINLFREMLEQNEAP-------------PDAVSYRIVFRGLCN 658
Query: 246 AGQTL-NAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKG-LSPDS 303
G + A L +L + G VP+ + +L KL + K S +
Sbjct: 659 GGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFSEEE 718
Query: 304 VTYGTLIDGLYRVEREEDAF 323
V +++ GL ++ + +DA
Sbjct: 719 V---SMVKGLLKIRKFQDAL 735
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 128/266 (48%), Gaps = 9/266 (3%)
Query: 263 GVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDA 322
G+ PD+ T+N+LI + C+A + A + +D+ GL PD T+ T++ G + A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 323 FKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPG--RDNDSINALE 380
+IR+ M++ C S ++ C+ ++ A + +++ + + G D + N L
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALN-FIQEMSNQDGFFPDQYTFNTLV 302
Query: 381 EYFMK-GEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNIN 439
K G V+ AI + + D ++ Y+ ++ G C+ +V EA+ + + + +
Sbjct: 303 NGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS 362
Query: 440 INPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKIC--KELLECLLVSQDKRKYA 497
N + LIS LC + + +A + KG + P +C L++ L ++++ R A
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKG--ILPDVCTFNSLIQGLCLTRNHR-VA 419
Query: 498 IDLIGRMKSRGYRLHKYQYRQTISLL 523
++L M+S+G ++ Y I L
Sbjct: 420 MELFEEMRSKGCEPDEFTYNMLIDSL 445
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 1/130 (0%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M M + D T+N LL FC+ G +++A +++ + +G + Y +LI G KA R
Sbjct: 531 MIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGR 590
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMI-QRGLLPDAHCYN 119
A L + GI Y +++GL + + EA+ +F EM+ Q PDA Y
Sbjct: 591 VEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYR 650
Query: 120 AIIKGFCDIG 129
+ +G C+ G
Sbjct: 651 IVFRGLCNGG 660
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 185 bits (469), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 179/344 (52%), Gaps = 13/344 (3%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
++ D T L+NGFC++ ++ +AVSL+ + G + Y+++ID K +R N+A
Sbjct: 151 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF 210
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
+ + + GI P+V+ Y ++ GL N R +A ++ ++MI++ + P+ Y+A++ F
Sbjct: 211 DFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAF 270
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
G++ A+ L E+ D T++ LI +C + EA +MF+ M GC
Sbjct: 271 VKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADV 330
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCE 245
V++N LING CKA ++++ LF +M VS++V+ ++ +
Sbjct: 331 VSYNTLINGFCKAKRVEDGMKLFREM-------------SQRGLVSNTVTYNTLIQGFFQ 377
Query: 246 AGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVT 305
AG A + +Q+ G+ PDI TYNIL+ C G + A +F+D+Q + + D VT
Sbjct: 378 AGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVT 437
Query: 306 YGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLC 349
Y T+I G+ + + E+A+ + + +P Y +M+ LC
Sbjct: 438 YTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 481
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 136/527 (25%), Positives = 230/527 (43%), Gaps = 65/527 (12%)
Query: 10 LATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYG 69
+ FN LL+ K K + +SL + +E G L ++ +I+ F + + A S+ G
Sbjct: 85 IVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILG 144
Query: 70 RMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIG 129
+M+K G PD + ++ G RV +AV + +M++ G PD YNAII C
Sbjct: 145 KMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTK 204
Query: 130 QLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFN 189
+++ A EI + T+T L+ +C +A + + M K P+ +T++
Sbjct: 205 RVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 264
Query: 190 ALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQT 249
AL++ K GK+ EA LF +M R++ D V+ S SL + +C +
Sbjct: 265 ALLDAFVKNGKVLEAKELFEEM---------VRMSIDPDIVTYS-SL---INGLCLHDRI 311
Query: 250 LNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTL 309
A ++ + G + D+ +YN LIN FCKA + KLF+++ +GL ++VTY TL
Sbjct: 312 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTL 371
Query: 310 IDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLP 369
I G ++ + A + M P Y L+ LC
Sbjct: 372 IQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLC-------------------- 411
Query: 370 GRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALII 429
DN GE+E+A+ ++ R D ++ Y+ ++ G C+ KV+EA +
Sbjct: 412 --DN------------GELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSL 457
Query: 430 FSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKELLECLLV 489
F L + + + ++SGLC K L++ ++ +G +C L
Sbjct: 458 FCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN--------DCTLS 509
Query: 490 SQDKRKYAIDLIGRMKSRGYRLHKYQYRQTISLLQQLQEGKAVKLFS 536
D A +LI +M S GY SLL+ ++ G K S
Sbjct: 510 DGDITLSA-ELIKKMLSCGY---------APSLLKDIKSGVCKKALS 546
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 97/408 (23%), Positives = 202/408 (49%), Gaps = 16/408 (3%)
Query: 60 RYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYN 119
+ N+A L+ M+K P ++ + +L + + + + +M G+ D + +N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 120 AIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKL 179
+I FC Q+ A S+ ++ D T L+ C++ V +A + ++M ++
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 180 GCFPSAVTFNALINGLCKAGKLDEAHLLFYKME-IGKSPSLFFRLAQGSDHVSDSVSLQK 238
G P V +NA+I+ LCK ++++A F ++E G P++ V+
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNV--------------VTYTA 230
Query: 239 KVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKG 298
V +C + + +A +LL+ + + P++ TY+ L+++F K G + A +LF+++
Sbjct: 231 LVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS 290
Query: 299 LSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAF 358
+ PD VTY +LI+GL +R ++A ++ D M+ C Y L+ C+ K++
Sbjct: 291 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGM 350
Query: 359 SLYLEYLKSLPGRDNDSINAL-EEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGF 417
L+ E + + + N L + +F G+V++A ++DF ++ Y+ILL G
Sbjct: 351 KLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 410
Query: 418 CQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIF 465
C ++++AL+IF + + ++++ + +I G+C + +A +F
Sbjct: 411 CDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 111/204 (54%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D+ T++ L+NG C +++EA + L+ G + Y++LI+GF KA+R + L+
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
M + G++ + + Y +++G G V +A + F++M G+ PD YN ++ G CD
Sbjct: 354 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDN 413
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
G+L+ A + ++ + D T+T +I MCK G V EA +F + G P VT+
Sbjct: 414 GELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTY 473
Query: 189 NALINGLCKAGKLDEAHLLFYKME 212
+++GLC G L E L+ KM+
Sbjct: 474 TTMMSGLCTKGLLHEVEALYTKMK 497
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 138/305 (45%), Gaps = 48/305 (15%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M ++ ++ T++ LL+ F K GK+ EA L + R + YSSLI+G R
Sbjct: 251 MIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDR 310
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+EA+ ++ M+ G L DV+ Y ++ G RV + +K+F EM QRGL+ + YN
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 370
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I+GF G +D A+ ++ D T+ IL+ +C G + +A +F M+K
Sbjct: 371 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 430
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKV 240
VT+ +I G+CK GK++EA LF S+SL+
Sbjct: 431 MDLDIVTYTTVIRGMCKTGKVEEAWSLFC-----------------------SLSLK--- 464
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLS 300
G+ PDI TY +++ C G ++ L+ ++ +GL
Sbjct: 465 ----------------------GLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLM 502
Query: 301 PDSVT 305
+ T
Sbjct: 503 KNDCT 507
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 115/219 (52%), Gaps = 9/219 (4%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D+ ++N L+NGFCK ++E+ + L R + + G Y++LI GFF+A ++A +
Sbjct: 329 DVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFF 388
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
+M GI PD+ Y I+L GL + G + +A+ +F +M +R + D Y +I+G C
Sbjct: 389 SQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKT 448
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
G+++ A SL +S D T+T ++ +C KG++ E + ++ +M++ G + T
Sbjct: 449 GKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL 508
Query: 189 NALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQG 226
+ G + + L KM G +PSL + G
Sbjct: 509 S--------DGDITLSAELIKKMLSCGYAPSLLKDIKSG 539
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 137/480 (28%), Positives = 227/480 (47%), Gaps = 19/480 (3%)
Query: 16 LLNGFCKQGKLEEAVSLLRLLERDGRGIRLS-GYSSLIDGFFKARRYNEAHSLYGRMIKG 74
LL GFC+ L +A+ + ++ ++ S YS LI G + R EA L +M +
Sbjct: 236 LLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEK 295
Query: 75 GILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHA 134
G P Y ++++ L + G + +A +F EMI RG P+ H Y +I G C G+++ A
Sbjct: 296 GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEA 355
Query: 135 RSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALING 194
+ ++ T+ LI CK G V A E+ MEK C P+ TFN L+ G
Sbjct: 356 NGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEG 415
Query: 195 LCKAGKLDEA-HLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAY 253
LC+ GK +A HLL ++ G SP D VS ++ +C G AY
Sbjct: 416 LCRVGKPYKAVHLLKRMLDNGLSP--------------DIVSYNVLIDGLCREGHMNTAY 461
Query: 254 KLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGL 313
KLL+ + + PD T+ +IN+FCK G + A + KG+S D VT TLIDG+
Sbjct: 462 KLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGV 521
Query: 314 YRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKI--SLAFSLYLEYLKSLPGR 371
+V + DA I + ++K + ++ L +G K+ LA + L +P
Sbjct: 522 CKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSV 581
Query: 372 DNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFS 431
+ ++ G++ + R L + N+ PY+I++ G CQ +V+EA + S
Sbjct: 582 VTYT-TLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLS 640
Query: 432 VLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKELLECLLVSQ 491
+ + ++ N + ++ G L A+ +++G+EL +I LL+ ++SQ
Sbjct: 641 AMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQ 700
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 148/315 (46%), Gaps = 19/315 (6%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R + ++ TFN L+ G C+ GK +AV LL+ + +G + Y+ LIDG +
Sbjct: 397 MEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGH 456
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
N A+ L M I PD + + ++ +G+ A M+++G+ D
Sbjct: 457 MNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTT 516
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTI-LICEMCKKGM-VREAQEMFNQMEK 178
+I G C +G+ A + + L T H++ +I +M KG V+E M ++ K
Sbjct: 517 LIDGVCKVGKTRDALFILETLVKMRIL--TTPHSLNVILDMLSKGCKVKEELAMLGKINK 574
Query: 179 LGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEI-GKSPSLFFRLAQGSDHVSDSVSLQ 237
LG PS VT+ L++GL ++G + + + M++ G P+++
Sbjct: 575 LGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVY--------------PYT 620
Query: 238 KKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLK 297
+ +C+ G+ A KLL+ + DSGV P+ TY +++ + G ++ A + + + +
Sbjct: 621 IIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVER 680
Query: 298 GLSPDSVTYGTLIDG 312
G + Y +L+ G
Sbjct: 681 GYELNDRIYSSLLQG 695
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 129/290 (44%), Gaps = 41/290 (14%)
Query: 10 LATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYG 69
+ T+ L++G + G + + +L L++ G + Y+ +I+G + R EA L
Sbjct: 581 VVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLS 640
Query: 70 RMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIG 129
M G+ P+ + Y +M++G N G++ A++ M++RG + Y+++++GF
Sbjct: 641 AMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFV--- 697
Query: 130 QLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKL-GCFPSAVTF 188
+ G D ++ I + E + + E+ + +E+L GC F
Sbjct: 698 ---------LSQKGIDNSEESTVSDIALRETDPECI----NELISVVEQLGGCISGLCIF 744
Query: 189 NALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKK----VEHMC 244
L+ LCK G+ DE++ L + L +G V L+K +E C
Sbjct: 745 --LVTRLCKEGRTDESNDLVQNV-----------LERG-------VFLEKAMDIIMESYC 784
Query: 245 EAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDL 294
+ +L+T + SG VP K++ ++I K G+ A +L +L
Sbjct: 785 SKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMEL 834
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 140/520 (26%), Positives = 237/520 (45%), Gaps = 50/520 (9%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
++ D TF+ L+NG C +G++ EA+ L+ + G L ++L++G + ++A
Sbjct: 138 YEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAV 197
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
L RM++ G P+ + Y +L+ + G+ A+++ +M +R + DA Y+ II G
Sbjct: 198 LLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGL 257
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
C G LD+A +L E+ D +T LI C G + ++ M K P
Sbjct: 258 CKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDV 317
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMC 244
V F+ALI+ K GKL EA L +M + G SP D+V+ ++ C
Sbjct: 318 VAFSALIDCFVKEGKLREAEELHKEMIQRGISP--------------DTVTYTSLIDGFC 363
Query: 245 EAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSV 304
+ Q A +L + G P+I+T+NILIN +CKA ++ +LF+ + L+G+ D+V
Sbjct: 364 KENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTV 423
Query: 305 TYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEY 364
TY TLI G + + E A ++ M+ P YK L+ LC
Sbjct: 424 TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLC--------------- 468
Query: 365 LKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVD 424
DN GE E+A+ +++ + ++ Y+I++ G C A KVD
Sbjct: 469 -------DN------------GEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVD 509
Query: 425 EALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKELL 484
+A +F L + + + +I GLC K +L +A ++F + G L+
Sbjct: 510 DAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILI 569
Query: 485 ECLLVSQDKRKYAIDLIGRMKSRGYRLHKYQYRQTISLLQ 524
L D K A LI +K G+ + + + +L
Sbjct: 570 RAHLGEGDATKSA-KLIEEIKRCGFSVDASTVKMVVDMLS 608
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/334 (31%), Positives = 167/334 (50%), Gaps = 26/334 (7%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R+ + D ++++++G CK G L+ A +L +E G + Y++LI GF A R
Sbjct: 238 MEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR 297
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+++ L MIK I PDV+ ++ ++ EG++ EA ++ EMIQRG+ PD Y +
Sbjct: 298 WDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I GFC QLD A + + + T ILI CK ++ + E+F +M G
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG 417
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKM-----------------------EIGKSP 217
VT+N LI G C+ GKL+ A LF +M E K+
Sbjct: 418 VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKAL 477
Query: 218 SLFFRLAQGSDHVSDSVSLQKKVEH-MCEAGQTLNAYKLLTQLADSGVVPDIKTYNILIN 276
+F ++ + + + + + H MC A + +A+ L L GV PD+KTYNI+I
Sbjct: 478 EIFEKIEKSKMEL--DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIG 535
Query: 277 SFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLI 310
CK G+++ A LF+ ++ G SP+ TY LI
Sbjct: 536 GLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILI 569
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 128/468 (27%), Positives = 223/468 (47%), Gaps = 18/468 (3%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R + L F+ L + + + + + L + +E G L S +I+ + R+
Sbjct: 63 MTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRK 122
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+ A S G++IK G PD + ++ ++ GL EGRV EA+++ M++ G P NA
Sbjct: 123 LSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNA 182
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
++ G C G++ A L + + T+ ++ MCK G A E+ +ME+
Sbjct: 183 LVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERK 242
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKV 240
AV ++ +I+GLCK G LD A LF +MEI +D + +
Sbjct: 243 IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI-------------KGFKADIIIYTTLI 289
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLS 300
C AG+ + KLL + + PD+ ++ LI+ F K G + A +L K++ +G+S
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349
Query: 301 PDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSL 360
PD+VTY +LIDG + + + A + D M+ C P+ + L+ C+ I L
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409
Query: 361 YLEYLKSLPGRDNDSI--NALEEYFMK-GEVERAIRGLLELDFRFRDFNLAPYSILLIGF 417
+ + SL G D++ N L + F + G++E A E+ R ++ Y ILL G
Sbjct: 410 FRKM--SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGL 467
Query: 418 CQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIF 465
C + ++AL IF +++ + ++ +I G+C + DA +F
Sbjct: 468 CDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 515
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 159/314 (50%), Gaps = 15/314 (4%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R+ D+ F+ L++ F K+GKL EA L + + + G Y+SLIDGF K +
Sbjct: 308 MIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQ 367
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
++A+ + M+ G P++ + I++ G + + +++F +M RG++ D YN
Sbjct: 368 LDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNT 427
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I+GFC++G+L+ A+ L E+ D ++ IL+ +C G +A E+F ++EK
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK 487
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEI-GKSPSLFFRLAQGSDHVSDSVSLQKK 239
+N +I+G+C A K+D+A LF + + G P D +
Sbjct: 488 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP--------------DVKTYNIM 533
Query: 240 VEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGL 299
+ +C+ G A L ++ + G P+ TYNILI + G+ + KL ++++ G
Sbjct: 534 IGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGF 593
Query: 300 SPDSVTYGTLIDGL 313
S D+ T ++D L
Sbjct: 594 SVDASTVKMVVDML 607
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 146/554 (26%), Positives = 249/554 (44%), Gaps = 39/554 (7%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M +RR ++ +FN+L+ FC KL ++S L + G + +++L+ G R
Sbjct: 132 MEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDR 191
Query: 61 YNEAHSLYGRMIKGGIL---------------PDVILYAIMLRGLSNEGRVGEAVKMFAE 105
+EA +L+G M++ G L P VI + ++ GL EGRV EA + +
Sbjct: 192 ISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNK 251
Query: 106 MIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGM 165
M+ +GL D Y I+ G C +G A +L ++ D ++ +I +CK G
Sbjct: 252 MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGH 311
Query: 166 VREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLA 224
+AQ +F++M + G P+ T+N +I+G C G+ +A L M E +P
Sbjct: 312 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP------- 364
Query: 225 QGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNM 284
D ++ + + G+ A KL ++ + PD TYN +I FCK
Sbjct: 365 -------DVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRF 417
Query: 285 NGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKAL 344
+ A +F DL SPD VT+ T+ID R +R ++ ++ + + + Y L
Sbjct: 418 DDAKHMF-DLM---ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473
Query: 345 MTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGE-VERAIRGLLELDFRFR 403
+ C ++ A L+ E + D + N L F + E +E A+ +
Sbjct: 474 IHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKI 533
Query: 404 DFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVV 463
D + Y+I++ G C+ KVDEA +F L + + + +ISG C K + DA V
Sbjct: 534 DLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANV 593
Query: 464 IFLYSLDKGFELGPKICKELLECLLVSQDKRKYAIDLIGRMKSRGYRLHKYQYRQTISLL 523
+F D G E L+ L + + K +I+LI M+S G+ + + L
Sbjct: 594 LFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK-SIELISEMRSNGFSGDAFTIKMVADL- 651
Query: 524 QQLQEGKAVKLFSE 537
+ +G+ K FS+
Sbjct: 652 --ITDGRLDKSFSD 663
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 107/441 (24%), Positives = 191/441 (43%), Gaps = 59/441 (13%)
Query: 12 TFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRM 71
TFN L+NG C +G++ EA +L+ + G I + Y ++++G K A +L +M
Sbjct: 228 TFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKM 287
Query: 72 IKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQL 131
+ I PDV++Y+ ++ L +G +A +F+EM+++G+ P+ YN +I GFC G+
Sbjct: 288 EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRW 347
Query: 132 DHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNAL 191
A+ L ++ + D T LI K+G + EA+++ ++M FP VT+N++
Sbjct: 348 SDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSM 407
Query: 192 INGLCKAGKLDEAHLLFYKMEIGKSPSLFF------------RLAQGSDH---------V 230
I G CK + D+A +F ++ SP + R+ +G V
Sbjct: 408 IYGFCKHNRFDDAKHMF---DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 464
Query: 231 SDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKT-------------------- 270
+++ + + CE A L ++ GV PD T
Sbjct: 465 ANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALEL 524
Query: 271 ---------------YNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYR 315
YNI+I+ CK ++ A+ LF L + G+ PD TY +I G
Sbjct: 525 FEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCG 584
Query: 316 VEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDS 375
DA + M + EP + Y L+ + +I + L E + D +
Sbjct: 585 KSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644
Query: 376 INALEEYFMKGEVERAIRGLL 396
I + + G ++++ +L
Sbjct: 645 IKMVADLITDGRLDKSFSDML 665
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 121/446 (27%), Positives = 207/446 (46%), Gaps = 19/446 (4%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D+ L+ GFC+ GK +A +L +LE G + Y+ +I G+ KA N A S+
Sbjct: 136 DIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVL 195
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
RM + PDV+ Y +LR L + G++ +A+++ M+QR PD Y +I+ C
Sbjct: 196 DRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRD 252
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
+ HA L E+ D T+ +L+ +CK+G + EA + N M GC P+ +T
Sbjct: 253 SGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITH 312
Query: 189 NALINGLCKAGK-LDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAG 247
N ++ +C G+ +D LL + G SPS+ V+ + +C G
Sbjct: 313 NIILRSMCSTGRWMDAEKLLADMLRKGFSPSV--------------VTFNILINFLCRKG 358
Query: 248 QTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYG 307
A +L ++ G P+ +YN L++ FCK M+ A + + + +G PD VTY
Sbjct: 359 LLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYN 418
Query: 308 TLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKS 367
T++ L + + EDA +I + + C P Y ++ L + K A L E
Sbjct: 419 TMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK 478
Query: 368 LPGRDNDSINALEEYFMK-GEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEA 426
D + ++L + G+V+ AI+ E + N ++ +++G C++++ D A
Sbjct: 479 DLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRA 538
Query: 427 LIIFSVLDEFNININPTSCVHLISGL 452
+ + N TS LI GL
Sbjct: 539 IDFLVFMINRGCKPNETSYTILIEGL 564
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/476 (25%), Positives = 216/476 (45%), Gaps = 57/476 (11%)
Query: 71 MIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQ 130
M+ G +PD+I ++RG G+ +A K+ + G +PD YN +I G+C G+
Sbjct: 128 MVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGE 187
Query: 131 LDHARSLHVEIS--------------------------------GHDGLHDTCTHTILIC 158
+++A S+ +S D D T+TILI
Sbjct: 188 INNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIE 247
Query: 159 EMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSP 217
C+ V A ++ ++M GC P VT+N L+NG+CK G+LDEA M G P
Sbjct: 248 ATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQP 307
Query: 218 SLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINS 277
++ ++ ++ L+ MC G+ ++A KLL + G P + T+NILIN
Sbjct: 308 NV----------ITHNIILRS----MCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINF 353
Query: 278 FCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPS 337
C+ G + A + + + G P+S++Y L+ G + ++ + A + + M+ C P
Sbjct: 354 LCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPD 413
Query: 338 FAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSI----NALEEYFMK-GEVERAI 392
Y ++T LC+ K+ A +E L L + + N + + K G+ +AI
Sbjct: 414 IVTYNTMLTALCKDGKVEDA----VEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 469
Query: 393 RGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGL 452
+ L E+ + + YS L+ G + KVDEA+ F + I N + ++ GL
Sbjct: 470 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGL 529
Query: 453 CAKRNLYDAVVIFLYSLDKGFELGPKICKELLECLLVSQDKRKYAIDLIGRMKSRG 508
C R A+ ++ +++G + L+E L + K A++L+ + ++G
Sbjct: 530 CKSRQTDRAIDFLVFMINRGCKPNETSYTILIEG-LAYEGMAKEALELLNELCNKG 584
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 169/349 (48%), Gaps = 15/349 (4%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R D+ T+ +L+ C+ + A+ LL + G + Y+ L++G K R
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+EA M G P+VI + I+LR + + GR +A K+ A+M+++G P +N
Sbjct: 290 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 349
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I C G L A + ++ H ++ ++ L+ CK+ + A E +M G
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEI-GKSPSLFFRLAQGSDHVSDSVSLQKK 239
C+P VT+N ++ LCK GK+++A + ++ G SP L ++
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVL--------------ITYNTV 455
Query: 240 VEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGL 299
++ + +AG+T A KLL ++ + PD TY+ L+ + G ++ A K F + + G+
Sbjct: 456 IDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGI 515
Query: 300 SPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWL 348
P++VT+ +++ GL + + + A M+ C+P+ Y L+ L
Sbjct: 516 RPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGL 564
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/460 (25%), Positives = 190/460 (41%), Gaps = 68/460 (14%)
Query: 87 LRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDG 146
LR + G + E K M+ G +PD +I+GFC +G+ A + + G
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 147 LHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHL 206
+ D T+ ++I CK G + A + ++M P VT+N ++ LC +GKL +A
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQA-- 223
Query: 207 LFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVP 266
ME+ R+ Q D D ++ +E C +A KLL ++ D G P
Sbjct: 224 ----MEV------LDRMLQ-RDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTP 272
Query: 267 DIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIR 326
D+ TYN+L+N CK G ++ A K D+ G P+ +T+ ++ + R DA K+
Sbjct: 273 DVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLL 332
Query: 327 DHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKG 386
ML+ PS + L+ +LCR KG
Sbjct: 333 ADMLRKGFSPSVVTFNILINFLCR----------------------------------KG 358
Query: 387 EVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCV 446
+ RAI L ++ N Y+ LL GFC+ KK+D A+ + + +
Sbjct: 359 LLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYN 418
Query: 447 HLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKELLECL------LVSQDKRKYAIDL 500
+++ LC + DAV I +L K C +L L K AI L
Sbjct: 419 TMLTALCKDGKVEDAVEIL-------NQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKL 471
Query: 501 IGRMKSRGYRLHKYQYRQTISLLQQLQEGK---AVKLFSE 537
+ M+++ + Y + L +EGK A+K F E
Sbjct: 472 LDEMRAKDLKPDTITYSSLVGGLS--REGKVDEAIKFFHE 509
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 149/321 (46%), Gaps = 22/321 (6%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R D+ T+NVL+NG CK+G+L+EA+ L + G + ++ ++ R
Sbjct: 265 MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+ +A L M++ G P V+ + I++ L +G +G A+ + +M Q G P++ YN
Sbjct: 325 WMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNP 384
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
++ GFC ++D A + D T+ ++ +CK G V +A E+ NQ+ G
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKM---EIGKSPSLFFRLAQG---SDHVSDSV 234
C P +T+N +I+GL KAGK +A L +M ++ + L G V +++
Sbjct: 445 CSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAI 504
Query: 235 SLQKKVEHM----------------CEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSF 278
+ E M C++ QT A L + + G P+ +Y ILI
Sbjct: 505 KFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGL 564
Query: 279 CKAGNMNGAFKLFKDLQLKGL 299
G A +L +L KGL
Sbjct: 565 AYEGMAKEALELLNELCNKGL 585
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 133/266 (50%), Gaps = 15/266 (5%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M + F + TFN+L+N C++G L A+ +L + + G Y+ L+ GF K ++
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKK 394
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+ A RM+ G PD++ Y ML L +G+V +AV++ ++ +G P YN
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT 454
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I G G+ A L E+ D DT T++ L+ + ++G V EA + F++ E++G
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG 514
Query: 181 CFPSAVTFNALINGLCKAGKLDEA-HLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKK 239
P+AVTFN+++ GLCK+ + D A L + + G P + S
Sbjct: 515 IRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKP--------------NETSYTIL 560
Query: 240 VEHMCEAGQTLNAYKLLTQLADSGVV 265
+E + G A +LL +L + G++
Sbjct: 561 IEGLAYEGMAKEALELLNELCNKGLM 586
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 118/291 (40%), Gaps = 15/291 (5%)
Query: 232 DSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLF 291
+ V + M G+ +K L + G VPDI LI FC+ G A K+
Sbjct: 101 EDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKIL 160
Query: 292 KDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRG 351
+ L+ G PD +TY +I G + +A + D M P Y ++ LC
Sbjct: 161 EILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDS 217
Query: 352 KKISLAFSLYLEYLKSLPGRD--NDSIN---ALEEYFMKGEVERAIRGLLELDFRFRDFN 406
K+ A +E L + RD D I +E V A++ L E+ R +
Sbjct: 218 GKLKQA----MEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPD 273
Query: 407 LAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFL 466
+ Y++L+ G C+ ++DEA+ + + N + ++ +C+ DA +
Sbjct: 274 VVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLA 333
Query: 467 YSLDKGFELGPKICK-ELLECLLVSQDKRKYAIDLIGRMKSRGYRLHKYQY 516
L KGF P + +L L + AID++ +M G + + Y
Sbjct: 334 DMLRKGFS--PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSY 382
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 112/379 (29%), Positives = 192/379 (50%), Gaps = 13/379 (3%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R Q DL T+ ++NG CK+G ++ A+SLL+ +E+ + Y+++IDG K +
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKH 273
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
++A +L+ M GI PDV Y+ ++ L N GR +A ++ ++MI+R + P+ ++A
Sbjct: 274 MDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 333
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I F G+L A L+ E+ D T++ LI C + EA+ MF M
Sbjct: 334 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 393
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKV 240
CFP+ VT++ LI G CKA +++E LF +M V ++V+ +
Sbjct: 394 CFPNVVTYSTLIKGFCKAKRVEEGMELFREM-------------SQRGLVGNTVTYTTLI 440
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLS 300
+A NA + Q+ GV P+I TYNIL++ CK G + A +F+ LQ +
Sbjct: 441 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 500
Query: 301 PDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSL 360
PD TY +I+G+ + + ED +++ ++ P+ Y +++ CR A SL
Sbjct: 501 PDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSL 560
Query: 361 YLEYLKSLPGRDNDSINAL 379
+ + P ++ + N L
Sbjct: 561 LKKMKEDGPLPNSGTYNTL 579
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/344 (30%), Positives = 181/344 (52%), Gaps = 19/344 (5%)
Query: 5 RFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIR--LSGYSSLIDGFFKARRYN 62
+ + D+ +N +++G CK +++A++L E D +GIR + YSSLI R++
Sbjct: 253 KIEADVVIYNTIIDGLCKYKHMDDALNLFT--EMDNKGIRPDVFTYSSLISCLCNYGRWS 310
Query: 63 EAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAII 122
+A L MI+ I P+V+ ++ ++ EG++ EA K++ EMI+R + PD Y+++I
Sbjct: 311 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 370
Query: 123 KGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCF 182
GFC +LD A+ + + D + T++ LI CK V E E+F +M + G
Sbjct: 371 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLV 430
Query: 183 PSAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVE 241
+ VT+ LI+G +A D A ++F +M +G P++ ++ ++
Sbjct: 431 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNI--------------LTYNILLD 476
Query: 242 HMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSP 301
+C+ G+ A + L S + PDI TYNI+I CKAG + ++LF +L LKG+SP
Sbjct: 477 GLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSP 536
Query: 302 DSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALM 345
+ + Y T+I G R +E+A + M + P+ Y L+
Sbjct: 537 NVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI 580
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 129/506 (25%), Positives = 229/506 (45%), Gaps = 52/506 (10%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
++ D+ T + LLNG+C ++ +AV+L+ + G +++LI G F + +EA
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
+L +M++ G PD++ Y ++ GL G + A+ + +M + + D YN II G
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGL 268
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
C +D A +L E+ D T++ LI +C G +A + + M + P+
Sbjct: 269 CKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNV 328
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKMEIGKS--PSLFFRLAQGSDHVSDSVSLQKKVEHM 243
VTF+ALI+ K GKL EA L+ +M I +S P +F + +
Sbjct: 329 VTFSALIDAFVKEGKLVEAEKLYDEM-IKRSIDPDIF--------------TYSSLINGF 373
Query: 244 CEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDS 303
C + A + + P++ TY+ LI FCKA + +LF+++ +GL ++
Sbjct: 374 CMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 433
Query: 304 VTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLE 363
VTY TLI G ++ ++A + M+ P+ Y L+ LC+ K++ A ++ E
Sbjct: 434 VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF-E 492
Query: 364 YLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKV 423
YL+ R +E D + Y+I++ G C+A KV
Sbjct: 493 YLQ--------------------------RSTMEPD-------IYTYNIMIEGMCKAGKV 519
Query: 424 DEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKEL 483
++ +F L ++ N + +ISG C K + +A + + G L
Sbjct: 520 EDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTL 579
Query: 484 LECLLVSQDKRKYAIDLIGRMKSRGY 509
+ L D R+ + +LI M+S G+
Sbjct: 580 IRARLRDGD-REASAELIKEMRSCGF 604
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/458 (24%), Positives = 215/458 (46%), Gaps = 16/458 (3%)
Query: 10 LATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYG 69
+ FN LL+ K K E +SL ++ G L YS I+ F + + + A ++
Sbjct: 83 IVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLA 142
Query: 70 RMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIG 129
+M+K G PD++ + +L G + R+ +AV + +M++ G PD + +I G
Sbjct: 143 KMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHN 202
Query: 130 QLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFN 189
+ A +L ++ D T+ ++ +CK+G + A + +MEK V +N
Sbjct: 203 KASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYN 262
Query: 190 ALINGLCKAGKLDEAHLLFYKME-IGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQ 248
+I+GLCK +D+A LF +M+ G P +F + + +C G+
Sbjct: 263 TIIDGLCKYKHMDDALNLFTEMDNKGIRPDVF--------------TYSSLISCLCNYGR 308
Query: 249 TLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGT 308
+A +LL+ + + + P++ T++ LI++F K G + A KL+ ++ + + PD TY +
Sbjct: 309 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 368
Query: 309 LIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEY-LKS 367
LI+G +R ++A + + M+ C P+ Y L+ C+ K++ L+ E +
Sbjct: 369 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRG 428
Query: 368 LPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEAL 427
L G + +F + + A ++ N+ Y+ILL G C+ K+ +A+
Sbjct: 429 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAM 488
Query: 428 IIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIF 465
++F L + + + +I G+C + D +F
Sbjct: 489 VVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELF 526
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 186/404 (46%), Gaps = 23/404 (5%)
Query: 85 IMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGH 144
I+ LS+ +V +AV +F +M++ P +N ++ + + + SL ++
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 145 DGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEA 204
HD T++I I C++ + A + +M KLG P VT ++L+NG C + ++ +A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 205 HLLFYKM-EIGKSPSLF---------FRLAQGSDHVS------------DSVSLQKKVEH 242
L +M E+G P F F + S+ V+ D V+ V
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 243 MCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPD 302
+C+ G A LL ++ + D+ YN +I+ CK +M+ A LF ++ KG+ PD
Sbjct: 233 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292
Query: 303 SVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYL 362
TY +LI L R DA ++ M++ P+ + AL+ + K+ A LY
Sbjct: 293 VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 352
Query: 363 EYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDF-NLAPYSILLIGFCQAK 421
E +K D + ++L F + + + EL F N+ YS L+ GFC+AK
Sbjct: 353 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAK 412
Query: 422 KVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIF 465
+V+E + +F + + + N + LI G R+ +A ++F
Sbjct: 413 RVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 456
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 108/234 (46%), Gaps = 38/234 (16%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
++ T++ L+ GFCK ++EE + L R + + G Y++LI GFF+AR + A ++
Sbjct: 397 NVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 456
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQR------------------- 109
+M+ G+ P+++ Y I+L GL G++ +A+ +F E +QR
Sbjct: 457 KQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF-EYLQRSTMEPDIYTYNIMIEGMCK 515
Query: 110 -----------------GLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCT 152
G+ P+ YN +I GFC G + A SL ++ L ++ T
Sbjct: 516 AGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGT 575
Query: 153 HTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHL 206
+ LI + G + E+ +M G A T L+ + G+LD++ L
Sbjct: 576 YNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNMLHDGRLDKSFL 628
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 141/526 (26%), Positives = 238/526 (45%), Gaps = 36/526 (6%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M +RR ++ +FN+L+ FC KL ++S L + G + +++L+ G R
Sbjct: 132 MEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDR 191
Query: 61 YNEAHSLYGRMIKGGIL---------------PDVILYAIMLRGLSNEGRVGEAVKMFAE 105
+EA +L+G M++ G L P VI + ++ GL EGRV EA + +
Sbjct: 192 ISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNK 251
Query: 106 MIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGM 165
M+ +GL D Y I+ G C +G A +L ++ D ++ +I +CK G
Sbjct: 252 MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGH 311
Query: 166 VREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLA 224
+AQ +F++M + G P+ T+N +I+G C G+ +A L M E +P
Sbjct: 312 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP------- 364
Query: 225 QGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNM 284
D ++ + + G+ A KL ++ + PD TYN +I FCK
Sbjct: 365 -------DVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRF 417
Query: 285 NGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKAL 344
+ A +F DL SPD VT+ T+ID R +R ++ ++ + + + Y L
Sbjct: 418 DDAKHMF-DLM---ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473
Query: 345 MTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGE-VERAIRGLLELDFRFR 403
+ C ++ A L+ E + D + N L F + E +E A+ +
Sbjct: 474 IHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKI 533
Query: 404 DFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVV 463
D + Y+I++ G C+ KVDEA +F L + + + +ISG C K + DA V
Sbjct: 534 DLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANV 593
Query: 464 IFLYSLDKGFELGPKICKELLECLLVSQDKRKYAIDLIGRMKSRGY 509
+F D G E L+ L + + K +I+LI M+S G+
Sbjct: 594 LFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK-SIELISEMRSNGF 638
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 189/443 (42%), Gaps = 59/443 (13%)
Query: 10 LATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYG 69
+ TFN L+NG C +G++ EA +L+ + G I + Y ++++G K A +L
Sbjct: 226 VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLS 285
Query: 70 RMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIG 129
+M + I PDV++Y+ ++ L +G +A +F+EM+++G+ P+ YN +I GFC G
Sbjct: 286 KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 345
Query: 130 QLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFN 189
+ A+ L ++ + D T LI K+G + EA+++ ++M FP VT+N
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYN 405
Query: 190 ALINGLCKAGKLDEAHLLFYKMEIGKSPSLFF------------RLAQGSDH-------- 229
++I G CK + D+A +F ++ SP + R+ +G
Sbjct: 406 SMIYGFCKHNRFDDAKHMF---DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRG 462
Query: 230 -VSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKT------------------ 270
V+++ + + CE A L ++ GV PD T
Sbjct: 463 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEAL 522
Query: 271 -----------------YNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGL 313
YNI+I+ CK ++ A+ LF L + G+ PD TY +I G
Sbjct: 523 ELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGF 582
Query: 314 YRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDN 373
DA + M + EP + Y L+ + +I + L E + D
Sbjct: 583 CGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDA 642
Query: 374 DSINALEEYFMKGEVERAIRGLL 396
+I EE + E I L
Sbjct: 643 FTIKMAEEIICRVSDEEIIENYL 665
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%)
Query: 3 MRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYN 62
M + D +N++++G CK K++EA L L G + Y+ +I GF +
Sbjct: 530 MSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAIS 589
Query: 63 EAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDA 115
+A+ L+ +M G PD Y ++RG G + +++++ +EM G DA
Sbjct: 590 DANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDA 642
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 144/553 (26%), Positives = 250/553 (45%), Gaps = 71/553 (12%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
DL T+++ +N FC++ +L A+++L + + G + SSL++G+ ++R ++A +L
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
+M++ G PD + ++ GL + EAV + +M+QRG PD Y ++ G C
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
G +D A +L ++ + +I +CK V A ++F +ME G P+ VT+
Sbjct: 237 GDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTY 296
Query: 189 NALINGLCKAGKLDEAHLLFYKM-EIGKSPSL---------FFR-------------LAQ 225
N+LIN LC G+ +A L M E +P++ FF+ + Q
Sbjct: 297 NSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ 356
Query: 226 GSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMN 285
S D+++ + C + A ++ + +P+I+TYN LIN FCK +
Sbjct: 357 RSID-PDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVE 415
Query: 286 GAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALM 345
+LF+++ +GL ++VTY T+I G ++ + A + M+ + Y L+
Sbjct: 416 DGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILL 475
Query: 346 TWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDF 405
LC K+ A ++ +Y K E+E
Sbjct: 476 HGLCSYGKLDTALVIF-------------------KYLQKSEME---------------L 501
Query: 406 NLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVH--LISGLCAKRNLYDAVV 463
N+ Y+ ++ G C+A KV EA +F L +I P + +ISGLC+KR L +A
Sbjct: 502 NIFIYNTMIEGMCKAGKVGEAWDLFCSL-----SIKPDVVTYNTMISGLCSKRLLQEADD 556
Query: 464 IFLYSLDKGFELGPKICKELLECLLVSQDKRKYAIDLIGRMKSRGYRLHKYQYRQTISLL 523
+F + G L+ L D R + +LI M+S G+ TISL+
Sbjct: 557 LFRKMKEDGTLPNSGTYNTLIRANLRDCD-RAASAELIKEMRSSGF----VGDASTISLV 611
Query: 524 QQ-LQEGKAVKLF 535
L +G+ K F
Sbjct: 612 TNMLHDGRLDKSF 624
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 176/361 (48%), Gaps = 16/361 (4%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R Q DL T+ ++NG CK+G ++ A++LL +E + ++++ID K R
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRH 273
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
A L+ M GI P+V+ Y ++ L N GR +A ++ + M+++ + P+ +NA
Sbjct: 274 VEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNA 333
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I F G+L A LH E+ DT T+ +LI C + EA++MF M
Sbjct: 334 LIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKD 393
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKV 240
C P+ T+N LING CK ++++ LF +M V ++V+ +
Sbjct: 394 CLPNIQTYNTLINGFCKCKRVEDGVELFREM-------------SQRGLVGNTVTYTTII 440
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLS 300
+ +AG +A + Q+ + V DI TY+IL++ C G ++ A +FK LQ +
Sbjct: 441 QGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEME 500
Query: 301 PDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSL 360
+ Y T+I+G+ + + +A+ D +P Y +++ LC + + A L
Sbjct: 501 LNIFIYNTMIEGMCKAGKVGEAW---DLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDL 557
Query: 361 Y 361
+
Sbjct: 558 F 558
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 159/332 (47%), Gaps = 25/332 (7%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R + ++ FN +++ CK +E AV L +E G + Y+SLI+ R
Sbjct: 249 MEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGR 308
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+++A L M++ I P+V+ + ++ EG++ EA K+ EMIQR + PD YN
Sbjct: 309 WSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNL 368
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I GFC +LD A+ + + D L + T+ LI CK V + E+F +M + G
Sbjct: 369 LINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRG 428
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPS---------------------- 218
+ VT+ +I G +AG D A ++F +M + P+
Sbjct: 429 LVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTAL 488
Query: 219 LFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSF 278
+ F+ Q S+ + +E MC+AG+ A+ L L+ + PD+ TYN +I+
Sbjct: 489 VIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---IKPDVVTYNTMISGL 545
Query: 279 CKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLI 310
C + A LF+ ++ G P+S TY TLI
Sbjct: 546 CSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI 577
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 175/383 (45%), Gaps = 16/383 (4%)
Query: 85 IMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGH 144
I+ LS+ +V +AV +F +M++ P +N ++ + + + SL ++
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 145 DGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEA 204
HD T++I I C++ + A + +M KLG P VT ++L+NG C + ++ +A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 205 HLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSG 263
L +M E+G P D+ + + + + A L+ Q+ G
Sbjct: 173 VALVDQMVEMGYKP--------------DTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Query: 264 VVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAF 323
PD+ TY ++N CK G+++ A L ++ + + V + T+ID L + E A
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAV 278
Query: 324 KIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINAL-EEY 382
+ M P+ Y +L+ LC + S A L L+ + + NAL + +
Sbjct: 279 DLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAF 338
Query: 383 FMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININP 442
F +G++ A + E+ R D + Y++L+ GFC ++DEA +F + + N
Sbjct: 339 FKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNI 398
Query: 443 TSCVHLISGLCAKRNLYDAVVIF 465
+ LI+G C + + D V +F
Sbjct: 399 QTYNTLINGFCKCKRVEDGVELF 421
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 101/233 (43%), Gaps = 39/233 (16%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
++ T+N L+NGFCK ++E+ V L R + + G Y+++I GFF+A + A ++
Sbjct: 397 NIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVF 456
Query: 69 GRMIKGGILPDVILYAIMLRGLSN-----------------------------------E 93
+M+ + D++ Y+I+L GL +
Sbjct: 457 KQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKA 516
Query: 94 GRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTH 153
G+VGEA +F + + PD YN +I G C L A L ++ L ++ T+
Sbjct: 517 GKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTY 573
Query: 154 TILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHL 206
LI + + E+ +M G A T +L+ + G+LD++ L
Sbjct: 574 NTLIRANLRDCDRAASAELIKEMRSSGFVGDASTI-SLVTNMLHDGRLDKSFL 625
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 71/124 (57%), Gaps = 3/124 (2%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R D+ T+++LL+G C GKL+ A+ + + L++ + + Y+++I+G KA +
Sbjct: 459 MVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGK 518
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
EA L+ + I PDV+ Y M+ GL ++ + EA +F +M + G LP++ YN
Sbjct: 519 VGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNT 575
Query: 121 IIKG 124
+I+
Sbjct: 576 LIRA 579
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 129/494 (26%), Positives = 222/494 (44%), Gaps = 60/494 (12%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
+L T+N+L+N FC++ ++ A++LL + + G + SSL++G+ +R ++A
Sbjct: 41 ISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 100
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
+L +M++ G PD I + ++ GL + EAV + M+QRG P+ Y ++ G
Sbjct: 101 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 160
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
C G +D A +L ++ D +I +CK V +A +F +ME G P+
Sbjct: 161 CKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNV 220
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSL---------------FFRLAQGSDH 229
VT+++LI+ LC G+ +A L M E +P+L F + D
Sbjct: 221 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDD 280
Query: 230 V------SDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGN 283
+ D + + C + A ++ + PD+ TYN LI FCK+
Sbjct: 281 MIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKR 340
Query: 284 MNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKA 343
+ +LF+++ +GL D+VTY TLI GL+ ++A K+ M+ P Y
Sbjct: 341 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 400
Query: 344 LMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFR 403
L+ LC K+ A ++ +Y K E++
Sbjct: 401 LLDGLCNNGKLEKALEVF-------------------DYMQKSEIK-------------- 427
Query: 404 DFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVV 463
++ Y+ ++ G C+A KVD+ +F L + N + +ISGLC+KR L +A
Sbjct: 428 -LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 486
Query: 464 IFLYSLDKGFELGP 477
+ L K E GP
Sbjct: 487 L----LKKMKEDGP 496
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 189/379 (49%), Gaps = 13/379 (3%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R Q +L T+ V++NG CK+G ++ A +LL +E + ++++ID K R
Sbjct: 141 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 200
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
++A +L+ M GI P+V+ Y+ ++ L + GR +A ++ ++MI++ + P+ +NA
Sbjct: 201 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 260
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I F G+ A LH ++ D T+ LI C + +A++MF M
Sbjct: 261 LIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD 320
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKV 240
CFP T+N LI G CK+ ++++ LF +M V D+V+ +
Sbjct: 321 CFPDLDTYNTLIKGFCKSKRVEDGTELFREM-------------SHRGLVGDTVTYTTLI 367
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLS 300
+ + G NA K+ Q+ GV PDI TY+IL++ C G + A ++F +Q +
Sbjct: 368 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 427
Query: 301 PDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSL 360
D Y T+I+G+ + + +D + + + +P+ Y +++ LC + + A++L
Sbjct: 428 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 487
Query: 361 YLEYLKSLPGRDNDSINAL 379
+ + P D+ + N L
Sbjct: 488 LKKMKEDGPLPDSGTYNTL 506
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/455 (25%), Positives = 215/455 (47%), Gaps = 16/455 (3%)
Query: 13 FNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMI 72
FN LL+ K K + +SL ++R G L Y+ LI+ F + + + A +L G+M+
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 73 KGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLD 132
K G P ++ + +L G + R+ +AV + +M++ G PD + +I G +
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132
Query: 133 HARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALI 192
A +L + + T+ +++ +CK+G + A + N+ME V FN +I
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 193 NGLCKAGKLDEAHLLFYKMEI-GKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLN 251
+ LCK +D+A LF +ME G P++ V+ + +C G+ +
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNV--------------VTYSSLISCLCSYGRWSD 238
Query: 252 AYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLID 311
A +LL+ + + + P++ T+N LI++F K G A KL D+ + + PD TY +LI+
Sbjct: 239 ASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLIN 298
Query: 312 GLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYL-KSLPG 370
G +R + A ++ + M+ C P Y L+ C+ K++ L+ E + L G
Sbjct: 299 GFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 358
Query: 371 RDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIF 430
++ F G+ + A + ++ ++ YSILL G C K+++AL +F
Sbjct: 359 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 418
Query: 431 SVLDEFNININPTSCVHLISGLCAKRNLYDAVVIF 465
+ + I ++ +I G+C + D +F
Sbjct: 419 DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 453
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 162/345 (46%), Gaps = 13/345 (3%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M + + D+ FN +++ CK +++A++L + +E G + YSSLI R
Sbjct: 176 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 235
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+++A L MI+ I P+++ + ++ EG+ EA K+ +MI+R + PD YN+
Sbjct: 236 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNS 295
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I GFC +LD A+ + + D D T+ LI CK V + E+F +M G
Sbjct: 296 LINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG 355
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKV 240
VT+ LI GL G D A +F +M P D ++ +
Sbjct: 356 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP-------------PDIMTYSILL 402
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLS 300
+ +C G+ A ++ + S + DI Y +I CKAG ++ + LF L LKG+
Sbjct: 403 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 462
Query: 301 PDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALM 345
P+ VTY T+I GL ++A+ + M + P Y L+
Sbjct: 463 PNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 507
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 160/336 (47%), Gaps = 22/336 (6%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M + + ++ T++ L++ C G+ +A LL + L +++LID F K +
Sbjct: 211 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 270
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+ EA L+ MIK I PD+ Y ++ G R+ +A +MF M+ + PD YN
Sbjct: 271 FVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNT 330
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+IKGFC +++ L E+S + DT T+T LI + G AQ++F QM G
Sbjct: 331 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 390
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLF---YKMEIGKSPSLFFRLAQG---SDHVSDS- 233
P +T++ L++GLC GKL++A +F K EI ++ + +G + V D
Sbjct: 391 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 450
Query: 234 ---------------VSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSF 278
V+ + +C AY LL ++ + G +PD TYN LI +
Sbjct: 451 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAH 510
Query: 279 CKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLY 314
+ G+ + +L ++++ D+ T G + + L+
Sbjct: 511 LRDGDKAASAELIREMRSCRFVGDASTIGLVANMLH 546
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/440 (24%), Positives = 202/440 (45%), Gaps = 28/440 (6%)
Query: 106 MIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGM 165
M++ LP +N ++ + + D SL ++ H+ T+ ILI C++
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 166 VREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPS--LFFR 222
+ A + +M KLG PS VT ++L+NG C ++ +A L +M E+G P F
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 223 LAQG---SDHVSDSVSLQKK----------------VEHMCEAGQTLNAYKLLTQLADSG 263
L G + S++V+L + V +C+ G A+ LL ++ +
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 264 VVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAF 323
+ D+ +N +I+S CK +++ A LFK+++ KG+ P+ VTY +LI L R DA
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 324 KIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYF 383
++ M++ P+ + AL+ + K A L+ + +K D + N+L F
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 384 -MKGEVERAIRGLLELDFRFRDF-NLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININ 441
M +++A + + E F +L Y+ L+ GFC++K+V++ +F + + +
Sbjct: 301 CMHDRLDKA-KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 359
Query: 442 PTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICK-ELLECLLVSQDKRKYAIDL 500
+ LI GL + +A +F + G + P I +L L + K + A+++
Sbjct: 360 TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG--VPPDIMTYSILLDGLCNNGKLEKALEV 417
Query: 501 IGRMKSRGYRLHKYQYRQTI 520
M+ +L Y Y I
Sbjct: 418 FDYMQKSEIKLDIYIYTTMI 437
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 102/233 (43%), Gaps = 36/233 (15%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
DL T+N L+ GFCK ++E+ L R + G Y++LI G F + A ++
Sbjct: 324 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 383
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMF---------------AEMIQ----- 108
+M+ G+ PD++ Y+I+L GL N G++ +A+++F MI+
Sbjct: 384 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 443
Query: 109 ---------------RGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTH 153
+G+ P+ YN +I G C L A +L ++ L D+ T+
Sbjct: 444 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTY 503
Query: 154 TILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHL 206
LI + G + E+ +M A T L+ + G+LD++ L
Sbjct: 504 NTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI-GLVANMLHDGRLDKSFL 555
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 179 bits (454), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 130/490 (26%), Positives = 220/490 (44%), Gaps = 60/490 (12%)
Query: 10 LATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYG 69
L T+N+L+N FC++ ++ A++LL + + G + SSL++G+ +R ++A +L
Sbjct: 120 LYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 179
Query: 70 RMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIG 129
+M++ G PD I + ++ GL + EAV + M+QRG P+ Y ++ G C G
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 130 QLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFN 189
D A +L ++ D +I +CK V +A +F +ME G P+ VT++
Sbjct: 240 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 299
Query: 190 ALINGLCKAGKLDEAHLLFYKM-EIGKSPSL---------------FFRLAQGSDHV--- 230
+LI+ LC G+ +A L M E +P+L F + D +
Sbjct: 300 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359
Query: 231 ---SDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGA 287
D + V C + A ++ + PD+ TYN LI FCK+ +
Sbjct: 360 SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 419
Query: 288 FKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTW 347
+LF+++ +GL D+VTY TLI GL+ ++A K+ M+ P Y L+
Sbjct: 420 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 479
Query: 348 LCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNL 407
LC K+ A ++ +Y K E++ ++
Sbjct: 480 LCNNGKLEKALEVF-------------------DYMQKSEIK---------------LDI 505
Query: 408 APYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLY 467
Y+ ++ G C+A KVD+ +F L + N + +ISGLC+KR L +A +
Sbjct: 506 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL--- 562
Query: 468 SLDKGFELGP 477
L K E GP
Sbjct: 563 -LKKMKEDGP 571
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 190/379 (50%), Gaps = 13/379 (3%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R Q +L T+ V++NG CK+G + A++LL +E + ++++ID K R
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 275
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
++A +L+ M GI P+V+ Y+ ++ L + GR +A ++ ++MI++ + P+ +NA
Sbjct: 276 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 335
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I F G+ A L+ ++ D T+ L+ C + +A++MF M
Sbjct: 336 LIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD 395
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKV 240
CFP VT+N LI G CK+ ++++ LF +M V D+V+ +
Sbjct: 396 CFPDVVTYNTLIKGFCKSKRVEDGTELFREM-------------SHRGLVGDTVTYTTLI 442
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLS 300
+ + G NA K+ Q+ GV PDI TY+IL++ C G + A ++F +Q +
Sbjct: 443 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK 502
Query: 301 PDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSL 360
D Y T+I+G+ + + +D + + + +P+ Y +++ LC + + A++L
Sbjct: 503 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 562
Query: 361 YLEYLKSLPGRDNDSINAL 379
+ + P ++ + N L
Sbjct: 563 LKKMKEDGPLPNSGTYNTL 581
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 164/345 (47%), Gaps = 13/345 (3%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M + + D+ FN +++ CK +++A++L + +E G + YSSLI R
Sbjct: 251 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 310
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+++A L MI+ I P+++ + ++ EG+ EA K++ +MI+R + PD YN+
Sbjct: 311 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNS 370
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
++ GFC +LD A+ + + D D T+ LI CK V + E+F +M G
Sbjct: 371 LVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRG 430
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKV 240
VT+ LI GL G D A +F +M P D ++ +
Sbjct: 431 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP-------------PDIMTYSILL 477
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLS 300
+ +C G+ A ++ + S + DI Y +I CKAG ++ + LF L LKG+
Sbjct: 478 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 537
Query: 301 PDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALM 345
P+ VTY T+I GL ++A+ + M + P+ Y L+
Sbjct: 538 PNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 582
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/458 (24%), Positives = 215/458 (46%), Gaps = 16/458 (3%)
Query: 10 LATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYG 69
+ FN LL+ K K + +SL ++R L Y+ LI+ F + + + A +L G
Sbjct: 85 IVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLG 144
Query: 70 RMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIG 129
+M+K G P ++ + +L G + R+ +AV + +M++ G PD + +I G
Sbjct: 145 KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 204
Query: 130 QLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFN 189
+ A +L + + T+ +++ +CK+G A + N+ME V FN
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFN 264
Query: 190 ALINGLCKAGKLDEAHLLFYKMEI-GKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQ 248
+I+ LCK +D+A LF +ME G P++ V+ + +C G+
Sbjct: 265 TIIDSLCKYRHVDDALNLFKEMETKGIRPNV--------------VTYSSLISCLCSYGR 310
Query: 249 TLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGT 308
+A +LL+ + + + P++ T+N LI++F K G A KL+ D+ + + PD TY +
Sbjct: 311 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNS 370
Query: 309 LIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYL-KS 367
L++G +R + A ++ + M+ C P Y L+ C+ K++ L+ E +
Sbjct: 371 LVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRG 430
Query: 368 LPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEAL 427
L G ++ F G+ + A + ++ ++ YSILL G C K+++AL
Sbjct: 431 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 490
Query: 428 IIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIF 465
+F + + I ++ +I G+C + D +F
Sbjct: 491 EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 528
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 160/336 (47%), Gaps = 22/336 (6%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M + + ++ T++ L++ C G+ +A LL + L +++LID F K +
Sbjct: 286 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 345
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+ EA LY MIK I PD+ Y ++ G R+ +A +MF M+ + PD YN
Sbjct: 346 FVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNT 405
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+IKGFC +++ L E+S + DT T+T LI + G AQ++F QM G
Sbjct: 406 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 465
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLF---YKMEIGKSPSLFFRLAQG---SDHVSDS- 233
P +T++ L++GLC GKL++A +F K EI ++ + +G + V D
Sbjct: 466 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 525
Query: 234 ---------------VSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSF 278
V+ + +C AY LL ++ + G +P+ TYN LI +
Sbjct: 526 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAH 585
Query: 279 CKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLY 314
+ G+ + +L ++++ D+ T G + + L+
Sbjct: 586 LRDGDKAASAELIREMRSCRFVGDASTIGLVANMLH 621
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 115/463 (24%), Positives = 216/463 (46%), Gaps = 28/463 (6%)
Query: 83 YAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEIS 142
Y +LR ++ ++ +A+ +F M++ LP +N ++ + + D SL ++
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 143 GHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLD 202
+ +H T+ ILI C++ + A + +M KLG PS VT ++L+NG C ++
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 203 EAHLLFYKM-EIGKSPS--LFFRLAQG---SDHVSDSVSLQKK----------------V 240
+A L +M E+G P F L G + S++V+L + V
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLS 300
+C+ G T A LL ++ + + D+ +N +I+S CK +++ A LFK+++ KG+
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
Query: 301 PDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSL 360
P+ VTY +LI L R DA ++ M++ P+ + AL+ + K A L
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352
Query: 361 YLEYLKSLPGRDNDSINALEEYF-MKGEVERAIRGLLELDFRFRDF-NLAPYSILLIGFC 418
Y + +K D + N+L F M +++A + + E F ++ Y+ L+ GFC
Sbjct: 353 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKA-KQMFEFMVSKDCFPDVVTYNTLIKGFC 411
Query: 419 QAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPK 478
++K+V++ +F + + + + LI GL + +A +F + G + P
Sbjct: 412 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG--VPPD 469
Query: 479 ICK-ELLECLLVSQDKRKYAIDLIGRMKSRGYRLHKYQYRQTI 520
I +L L + K + A+++ M+ +L Y Y I
Sbjct: 470 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 512
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 102/233 (43%), Gaps = 36/233 (15%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D+ T+N L+ GFCK ++E+ L R + G Y++LI G F + A ++
Sbjct: 399 DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 458
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMF---------------AEMIQ----- 108
+M+ G+ PD++ Y+I+L GL N G++ +A+++F MI+
Sbjct: 459 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 518
Query: 109 ---------------RGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTH 153
+G+ P+ YN +I G C L A +L ++ L ++ T+
Sbjct: 519 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTY 578
Query: 154 TILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHL 206
LI + G + E+ +M A T L+ + G+LD++ L
Sbjct: 579 NTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI-GLVANMLHDGRLDKSFL 630
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 121/454 (26%), Positives = 216/454 (47%), Gaps = 27/454 (5%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
+L T+N+++N C++ +L A+++L + + G G + +SL++GF R +EA +
Sbjct: 97 SHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVA 156
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
L +M++ G PD + + ++ GL + EAV + M+ +G PD Y A+I G C
Sbjct: 157 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC 216
Query: 127 DIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAV 186
G+ D A +L ++ D ++ +I +CK V +A +F +M+ G P
Sbjct: 217 KRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVF 276
Query: 187 TFNALINGLCKAGKLDEAHLLFYKM-----------------------EIGKSPSLFFRL 223
T+++LI+ LC G+ +A L M ++ ++ LF +
Sbjct: 277 TYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 336
Query: 224 AQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGN 283
Q S + V+ + C + A ++ T + +PD+ TYN LIN FCKA
Sbjct: 337 IQRSID-PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKK 395
Query: 284 MNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKA 343
+ +LF+D+ +GL ++VTY TLI G ++ ++A + M+ P+ Y
Sbjct: 396 VVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNT 455
Query: 344 LMTWLCRGKKISLAFSLYLEYL-KSLPGRDNDSINALEEYFMK-GEVERAIRGLLELDFR 401
L+ LC+ K+ A ++ EYL KS D + N + E K G+VE L +
Sbjct: 456 LLDGLCKNGKLEKAMVVF-EYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLK 514
Query: 402 FRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDE 435
++ Y+ ++ GFC+ +EA +F + E
Sbjct: 515 GVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKE 548
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 188/379 (49%), Gaps = 13/379 (3%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M ++ Q DL T+ ++NG CK+G+ + A++LL +E+ + YS++ID K R
Sbjct: 196 MVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRH 255
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
++A +L+ M GI PDV Y+ ++ L N GR +A ++ ++M++R + P+ +N+
Sbjct: 256 VDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNS 315
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I F G+L A L E+ + T+ LI C + EAQ++F M
Sbjct: 316 LIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD 375
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKV 240
C P VT+N LING CKA K+ + ME+ FR V ++V+ +
Sbjct: 376 CLPDVVTYNTLINGFCKAKKVVDG------MEL-------FRDMSRRGLVGNTVTYTTLI 422
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLS 300
+A NA + Q+ GV P+I TYN L++ CK G + A +F+ LQ +
Sbjct: 423 HGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKME 482
Query: 301 PDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSL 360
PD TY + +G+ + + ED + + + +P Y +++ C+ A++L
Sbjct: 483 PDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTL 542
Query: 361 YLEYLKSLPGRDNDSINAL 379
+++ + P D+ + N L
Sbjct: 543 FIKMKEDGPLPDSGTYNTL 561
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 183/371 (49%), Gaps = 15/371 (4%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
+Q D TF L++G + K EAV+L+ + G L Y ++I+G K + A
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
+L +M KG I DV++Y+ ++ L V +A+ +F EM +G+ PD Y+++I
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
C+ G+ A L ++ + T LI K+G + EA+++F++M + P+
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCE 245
VT+N+LING C +LDEA + F L D + D V+ + C+
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQI-------------FTLMVSKDCLPDVVTYNTLINGFCK 392
Query: 246 AGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVT 305
A + ++ +L ++ G+V + TY LI+ F +A + + A +FK + G+ P+ +T
Sbjct: 393 AKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMT 452
Query: 306 YGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYL 365
Y TL+DGL + + E A + +++ K EP Y + +C+ K+ + L+
Sbjct: 453 YNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSL- 511
Query: 366 KSLPGRDNDSI 376
SL G D I
Sbjct: 512 -SLKGVKPDVI 521
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/450 (26%), Positives = 210/450 (46%), Gaps = 26/450 (5%)
Query: 25 KLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYA 84
KL+EAV L + + + +S L+ K ++++ S +M G+ ++ Y
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 85 IMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGH 144
IM+ L ++ A+ + +M++ G P N+++ GFC ++ A +L ++
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 145 DGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEA 204
DT T T L+ + + EA + +M GC P VT+ A+INGLCK G+ D A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 205 HLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGV 264
L KME GK + D V ++ +C+ +A L T++ + G+
Sbjct: 225 LNLLNKMEKGKIEA-------------DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI 271
Query: 265 VPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFK 324
PD+ TY+ LI+ C G + A +L D+ + ++P+ VT+ +LID + + +A K
Sbjct: 272 RPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEK 331
Query: 325 IRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFM 384
+ D M++ +P+ Y +L+ C ++ A ++ + D + N L F
Sbjct: 332 LFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFC 391
Query: 385 KGEVERAIRGLLELDFRFRDF-------NLAPYSILLIGFCQAKKVDEALIIFSVLDEFN 437
K + + + G+ EL FRD N Y+ L+ GF QA D A ++F +
Sbjct: 392 KAK--KVVDGM-EL---FRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDG 445
Query: 438 ININPTSCVHLISGLCAKRNLYDAVVIFLY 467
++ N + L+ GLC L A+V+F Y
Sbjct: 446 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 475
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 160/316 (50%), Gaps = 17/316 (5%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R+ ++ TFN L++ F K+GKL EA L + + + Y+SLI+GF R
Sbjct: 301 MLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDR 360
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+EA ++ M+ LPDV+ Y ++ G +V + +++F +M +RGL+ + Y
Sbjct: 361 LDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTT 420
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLH-DTCTHTILICEMCKKGMVREAQEMFNQMEKL 179
+I GF D+A+ + ++ DG+H + T+ L+ +CK G + +A +F ++K
Sbjct: 421 LIHGFFQASDCDNAQMVFKQMVS-DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS 479
Query: 180 GCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEI-GKSPSLFFRLAQGSDHVSDSVSLQK 238
P T+N + G+CKAGK+++ LF + + G P D ++
Sbjct: 480 KMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKP--------------DVIAYNT 525
Query: 239 KVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKG 298
+ C+ G AY L ++ + G +PD TYN LI + + G+ + +L K+++
Sbjct: 526 MISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCR 585
Query: 299 LSPDSVTYGTLIDGLY 314
+ D+ TYG + D L+
Sbjct: 586 FAGDASTYGLVTDMLH 601
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 101/233 (43%), Gaps = 36/233 (15%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D+ T+N L+NGFCK K+ + + L R + R G Y++LI GFF+A + A ++
Sbjct: 379 DVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVF 438
Query: 69 GRMIKGGILP-----------------------------------DVILYAIMLRGLSNE 93
+M+ G+ P D+ Y IM G+
Sbjct: 439 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKA 498
Query: 94 GRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTH 153
G+V + +F + +G+ PD YN +I GFC G + A +L +++ L D+ T+
Sbjct: 499 GKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTY 558
Query: 154 TILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHL 206
LI + G + E+ +M A T+ L+ + G+LD+ L
Sbjct: 559 NTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY-GLVTDMLHDGRLDKGFL 610
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Query: 5 RFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEA 64
+ + D+ T+N++ G CK GK+E+ L L G + Y+++I GF K EA
Sbjct: 480 KMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEA 539
Query: 65 HSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKG 124
++L+ +M + G LPD Y ++R +G + ++ EM DA Y +
Sbjct: 540 YTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDM 599
Query: 125 FCDIGQLD 132
D G+LD
Sbjct: 600 LHD-GRLD 606
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 119/290 (41%), Gaps = 7/290 (2%)
Query: 252 AYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLID 311
A L ++ S P I ++ L+++ K + + +++ G+S + TY +I+
Sbjct: 49 AVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMIN 108
Query: 312 GLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGR 371
L R + A I M+K PS +L+ C G +IS A +L + ++
Sbjct: 109 CLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP 168
Query: 372 DNDSINAL-EEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIF 430
D + L F + A+ + + + +L Y ++ G C+ + D AL +
Sbjct: 169 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 228
Query: 431 SVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKELLECLLVS 490
+ +++ I + +I LC R++ DA+ +F +KG L+ C L +
Sbjct: 229 NKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC-LCN 287
Query: 491 QDKRKYAIDLIGRMKSRGYRLHKYQYRQTISLLQQLQEGK---AVKLFSE 537
+ A L+ M R + + I +EGK A KLF E
Sbjct: 288 YGRWSDASRLLSDMLERKINPNVVTFNSLIDAFA--KEGKLIEAEKLFDE 335
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 178 bits (452), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 176/350 (50%), Gaps = 13/350 (3%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R Q +L T+ V++NG CK+G ++ A +LL +E + YS++ID K R
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRH 275
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
++A +L+ M G+ P+VI Y+ ++ L N R +A ++ ++MI+R + P+ +NA
Sbjct: 276 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNA 335
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I F G+L A L+ E+ D T++ LI C + EA+ MF M
Sbjct: 336 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 395
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKV 240
CFP+ VT+N LING CKA ++DE LF +M V ++V+ +
Sbjct: 396 CFPNVVTYNTLINGFCKAKRIDEGVELFREM-------------SQRGLVGNTVTYTTLI 442
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLS 300
+A NA + Q+ GV P+I TYN L++ CK G + A +F+ LQ +
Sbjct: 443 HGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 502
Query: 301 PDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCR 350
P TY +I+G+ + + ED + + + +P +Y +++ CR
Sbjct: 503 PTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCR 552
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 114/469 (24%), Positives = 209/469 (44%), Gaps = 56/469 (11%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
+L T+N+L+N FC++ ++ A++LL + + G + SSL++G+ +R ++A +L
Sbjct: 119 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 178
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
+M++ G PD I + ++ GL + EAV + M+QRG P+ Y ++ G C
Sbjct: 179 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
G +D A +L ++ + ++ +I +CK +A +F +ME G P+ +T+
Sbjct: 239 GDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 298
Query: 189 NALINGLCKAGKLDEAHLLFYKM---EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHM-- 243
++LI+ LC + +A L M +I + F L V +K + M
Sbjct: 299 SSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIK 358
Query: 244 -----------------CEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNG 286
C + A + + P++ TYN LIN FCKA ++
Sbjct: 359 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDE 418
Query: 287 AFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMT 346
+LF+++ +GL ++VTY TLI G ++ ++A + M+ P+ Y L+
Sbjct: 419 GVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 478
Query: 347 WLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFN 406
LC+ K+ A ++ EY + ++E I
Sbjct: 479 GLCKNGKLEKAMVVF-------------------EYLQRSKMEPTI-------------- 505
Query: 407 LAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAK 455
Y+I++ G C+A KV++ +F L + + +ISG C K
Sbjct: 506 -YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRK 553
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/456 (24%), Positives = 210/456 (46%), Gaps = 49/456 (10%)
Query: 13 FNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMI 72
FN LL+ K K + +SL ++R G L Y+ LI+ F + + + A +L G+M+
Sbjct: 88 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 73 KGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLD 132
K G P ++ + +L G + R+ +AV + +M++ G PD + +I G +
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 133 HARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALI 192
A +L + + T+ +++ +CK+G + A + N+ME + V ++ +I
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267
Query: 193 NGLCKAGKLDEAHLLFYKME-IGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLN 251
+ LCK D+A LF +ME G P++ ++ + +C + +
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNV--------------ITYSSLISCLCNYERWSD 313
Query: 252 AYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLID 311
A +LL+ + + + P++ T+N LI++F K G + A KL+ ++ + + PD TY +LI+
Sbjct: 314 ASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 373
Query: 312 GLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGR 371
G +R ++A + + M+ C P+ Y L+ C+ K+I L+ E +
Sbjct: 374 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQ----- 428
Query: 372 DNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFS 431
RGL+ N Y+ L+ GF QA+ D A ++F
Sbjct: 429 ---------------------RGLVG--------NTVTYTTLIHGFFQARDCDNAQMVFK 459
Query: 432 VLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLY 467
+ ++ N + L+ GLC L A+V+F Y
Sbjct: 460 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 495
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 184/385 (47%), Gaps = 16/385 (4%)
Query: 83 YAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEIS 142
Y +LR + ++ +A+ +F M++ LP +N ++ + + D SL ++
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 143 GHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLD 202
H+ T+ ILI C++ + A + +M KLG PS VT ++L+NG C ++
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 203 EAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLAD 261
+A L +M E+G P D+++ + + + A L+ ++
Sbjct: 173 DAVALVDQMVEMGYRP--------------DTITFTTLIHGLFLHNKASEAVALVDRMVQ 218
Query: 262 SGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREED 321
G P++ TY +++N CK G+++ AF L ++ + + V Y T+ID L + E+D
Sbjct: 219 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDD 278
Query: 322 AFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEE 381
A + M P+ Y +L++ LC ++ S A L + ++ + + NAL +
Sbjct: 279 ALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALID 338
Query: 382 YFMK-GEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNINI 440
F+K G++ A + E+ R D ++ YS L+ GFC ++DEA +F ++ +
Sbjct: 339 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 398
Query: 441 NPTSCVHLISGLCAKRNLYDAVVIF 465
N + LI+G C + + + V +F
Sbjct: 399 NVVTYNTLINGFCKAKRIDEGVELF 423
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 98/179 (54%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
++ T+N L+NGFCK +++E V L R + + G Y++LI GFF+AR + A ++
Sbjct: 399 NVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 458
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
+M+ G+ P+++ Y +L GL G++ +A+ +F + + + P + YN +I+G C
Sbjct: 459 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 518
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVT 187
G+++ L +S D + +I C+KG+ EA +F +M + G P + T
Sbjct: 519 GKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 124/293 (42%), Gaps = 11/293 (3%)
Query: 251 NAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLI 310
+A L + S +P I +N L+++ K + L + +Q G+S + TY LI
Sbjct: 68 DAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILI 127
Query: 311 DGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPG 370
+ R + A + M+K EPS +L+ C GK+IS A +L + ++ G
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM--G 185
Query: 371 RDNDSIN---ALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEAL 427
D+I + F+ + A+ + + R NL Y +++ G C+ +D A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 428 IIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKELLECL 487
+ + ++ I N +I LC R+ DA+ +F +KG L+ C
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC- 304
Query: 488 LVSQDKRKYAIDLIGRMKSRGYRLHKYQYRQTISLLQQLQEGKAV---KLFSE 537
L + ++ A L+ M R + + I ++EGK V KL+ E
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAF--VKEGKLVEAEKLYDE 355
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 178 bits (452), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 140/515 (27%), Positives = 239/515 (46%), Gaps = 34/515 (6%)
Query: 13 FNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMI 72
FN++L+ FCKQ LE +G + + +I+ F + + A+S+ G+++
Sbjct: 104 FNLVLD-FCKQ------------LELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVM 150
Query: 73 KGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLD 132
K G PD + +++GL EG+V EAV + M++ G PD YN+I+ G C G
Sbjct: 151 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 210
Query: 133 HARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALI 192
A L ++ + D T++ +I +C+ G + A +F +ME G S VT+N+L+
Sbjct: 211 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
Query: 193 NGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNA 252
GLCKAGK ++ LL M + V + ++ ++ + G+ A
Sbjct: 271 RGLCKAGKWNDGALLLKDM-------------VSREIVPNVITFNVLLDVFVKEGKLQEA 317
Query: 253 YKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDG 312
+L ++ G+ P+I TYN L++ +C ++ A + + SPD VT+ +LI G
Sbjct: 318 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377
Query: 313 LYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKS--LPG 370
V+R +D K+ ++ K + Y L+ C+ KI LA L+ E + LP
Sbjct: 378 YCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPD 437
Query: 371 RDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIF 430
I L+ G++E+A+ +L D + Y+ ++ G C+ KV++A +F
Sbjct: 438 VMTYGI-LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLF 496
Query: 431 SVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKIC--KELLECLL 488
L + N + +ISGLC K +L +A ++ + G P C L+ L
Sbjct: 497 CSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN--APNDCTYNTLIRAHL 554
Query: 489 VSQDKRKYAIDLIGRMKSRGYRLHKYQYRQTISLL 523
D A LI MKS G+ + I +L
Sbjct: 555 RDGDLTASA-KLIEEMKSCGFSADASSIKMVIDML 588
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/431 (24%), Positives = 206/431 (47%), Gaps = 49/431 (11%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
++ D TFN L+ G +GK+ EAV L+ + +G + Y+S+++G ++ + A
Sbjct: 154 YEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLAL 213
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
L +M + + DV Y+ ++ L +G + A+ +F EM +G+ YN++++G
Sbjct: 214 DLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 273
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
C G+ + L ++ + + + T +L+ K+G ++EA E++ +M G P+
Sbjct: 274 CKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNI 333
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKMEIGK-SPSLFFRLAQGSDHVSDSVSLQKKVEHMC 244
+T+N L++G C +L EA+ + M K SP D V+ ++ C
Sbjct: 334 ITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP--------------DIVTFTSLIKGYC 379
Query: 245 EAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSV 304
+ + K+ ++ G+V + TY+IL+ FC++G + A +LF+++ G+ PD +
Sbjct: 380 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 439
Query: 305 TYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEY 364
TYG L+DGL + E A +I + + K + +Y ++ +C+G K+ A++L+
Sbjct: 440 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFC-- 497
Query: 365 LKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVD 424
SLP + N+ Y++++ G C+ +
Sbjct: 498 --SLPCKGVKP------------------------------NVMTYTVMISGLCKKGSLS 525
Query: 425 EALIIFSVLDE 435
EA I+ ++E
Sbjct: 526 EANILLRKMEE 536
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 158/315 (50%), Gaps = 13/315 (4%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M + + + T+N L+ G CK GK + LL+ + + ++ L+D F K +
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 313
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
EA+ LY MI GI P++I Y ++ G + R+ EA M M++ PD + +
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 373
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+IKG+C + ++D + IS + + T++IL+ C+ G ++ A+E+F +M G
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKV 240
P +T+ L++GLC GKL++A +F + Q S V +
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDL-------------QKSKMDLGIVMYTTII 480
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLS 300
E MC+ G+ +A+ L L GV P++ TY ++I+ CK G+++ A L + ++ G +
Sbjct: 481 EGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNA 540
Query: 301 PDSVTYGTLIDGLYR 315
P+ TY TLI R
Sbjct: 541 PNDCTYNTLIRAHLR 555
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 165/314 (52%), Gaps = 15/314 (4%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R ++ TFNVLL+ F K+GKL+EA L + + G + Y++L+DG+ R
Sbjct: 289 MVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNR 348
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+EA+++ M++ PD++ + +++G RV + +K+F + +RGL+ +A Y+
Sbjct: 349 LSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSI 408
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+++GFC G++ A L E+ H L D T+ IL+ +C G + +A E+F ++K
Sbjct: 409 LVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK 468
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEI-GKSPSLFFRLAQGSDHVSDSVSLQKK 239
V + +I G+CK GK+++A LF + G P++ ++
Sbjct: 469 MDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNV--------------MTYTVM 514
Query: 240 VEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGL 299
+ +C+ G A LL ++ + G P+ TYN LI + + G++ + KL ++++ G
Sbjct: 515 ISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 574
Query: 300 SPDSVTYGTLIDGL 313
S D+ + +ID L
Sbjct: 575 SADASSIKMVIDML 588
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 128/469 (27%), Positives = 231/469 (49%), Gaps = 18/469 (3%)
Query: 13 FNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMI 72
F+ L + K + + ++L + +E G L S +I+ F + R+ A S G++I
Sbjct: 91 FSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKII 150
Query: 73 KGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLD 132
K G P+ I ++ ++ GL EGRV EA+++ M++ G PD N ++ G C G+
Sbjct: 151 KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEA 210
Query: 133 HARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALI 192
A L ++ + + T+ ++ MCK G A E+ +ME+ AV ++ +I
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 193 NGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNA 252
+GLCK G LD A LF +ME+ ++ ++ + C AG+ +
Sbjct: 271 DGLCKHGSLDNAFNLFNEMEM-------------KGITTNIITYNILIGGFCNAGRWDDG 317
Query: 253 YKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDG 312
KLL + + P++ T+++LI+SF K G + A +L K++ +G++PD++TY +LIDG
Sbjct: 318 AKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDG 377
Query: 313 LYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRD 372
+ + A ++ D M+ C+P+ + L+ C+ +I L+ + SL G
Sbjct: 378 FCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM--SLRGVV 435
Query: 373 NDSI--NALEEYFMK-GEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALII 429
D++ N L + F + G++ A E+ R N+ Y ILL G C + ++AL I
Sbjct: 436 ADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEI 495
Query: 430 FSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPK 478
F +++ + ++ +I G+C + DA +F KG + G K
Sbjct: 496 FEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVK 544
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 137/546 (25%), Positives = 240/546 (43%), Gaps = 57/546 (10%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M ++ +L T ++++N FC+ KL A S + + + G +S+LI+G R
Sbjct: 114 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 173
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+EA L RM++ G PD+I ++ GL G+ EA+ + +M++ G P+A Y
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 233
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
++ C GQ A L ++ + D ++I+I +CK G + A +FN+ME G
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG 293
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKM---EIGKSPSLFFRLAQG----------- 226
+ +T+N LI G C AG+ D+ L M +I + F L
Sbjct: 294 ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 353
Query: 227 --------SDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSF 278
D+++ ++ C+ A +++ + G P+I+T+NILIN +
Sbjct: 354 ELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGY 413
Query: 279 CKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSF 338
CKA ++ +LF+ + L+G+ D+VTY TLI G + + A ++ M+ P+
Sbjct: 414 CKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNI 473
Query: 339 AVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLEL 398
YK L+ LC DN GE E+A+ ++
Sbjct: 474 VTYKILLDGLC----------------------DN------------GESEKALEIFEKI 499
Query: 399 DFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNL 458
+ + ++ Y+I++ G C A KVD+A +F L + + +I GLC K L
Sbjct: 500 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPL 559
Query: 459 YDAVVIFLYSLDKGFELGPKICKELLECLLVSQDKRKYAIDLIGRMKSRGYRLHKYQYRQ 518
+A ++F + G L+ L D K ++ LI +K G+ + +
Sbjct: 560 SEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATK-SVKLIEELKRCGFSVDASTIKM 618
Query: 519 TISLLQ 524
I +L
Sbjct: 619 VIDMLS 624
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 180/382 (47%), Gaps = 23/382 (6%)
Query: 95 RVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHT 154
+ +A+ +F +MI LP ++ + Q D +L ++ H+ T +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 155 ILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EI 213
I+I C+ + A ++ KLG P+ +TF+ LINGLC G++ EA L +M E+
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 214 GKSP------SLFFRLAQGSDHVSDSVSLQKKVEH---------------MCEAGQTLNA 252
G P +L L + + K VE+ MC++GQT A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 253 YKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDG 312
+LL ++ + + D Y+I+I+ CK G+++ AF LF ++++KG++ + +TY LI G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 313 LYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRD 372
R +D K+ M+K P+ + L+ + K+ A L+ E + D
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367
Query: 373 NDSINALEEYFMK-GEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFS 431
+ +L + F K +++A + + + + D N+ ++IL+ G+C+A ++D+ L +F
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 427
Query: 432 VLDEFNININPTSCVHLISGLC 453
+ + + + LI G C
Sbjct: 428 KMSLRGVVADTVTYNTLIQGFC 449
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 129/480 (26%), Positives = 228/480 (47%), Gaps = 24/480 (5%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
MW F+ D+ +++ ++N K GKL++A+ L + G ++ Y+ LIDGF K +
Sbjct: 175 MWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKD 234
Query: 61 YNEAHSLYGRMIK-GGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYN 119
+ A L+ R+++ + P+V + IM+ GLS GRV + +K++ M Q D + Y+
Sbjct: 235 HKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYS 294
Query: 120 AIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKL 179
++I G CD G +D A S+ E+ D T+ ++ C+ G ++E+ E++ ME
Sbjct: 295 SLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHK 354
Query: 180 GCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKK 239
+ V++N LI GL + GK+DEA ++ +RL + +D +
Sbjct: 355 NSV-NIVSYNILIKGLLENGKIDEA-------------TMIWRLMPAKGYAADKTTYGIF 400
Query: 240 VEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGL 299
+ +C G A ++ ++ SG D+ Y +I+ CK + A L K++ G+
Sbjct: 401 IHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGV 460
Query: 300 SPDSVTYGTLIDGLYRVER-EEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAF 358
+S LI GL R R E +F +R+ M K+ C P+ Y L+ LC+ K A
Sbjct: 461 ELNSHVCNALIGGLIRDSRLGEASFFLRE-MGKNGCRPTVVSYNILICGLCKAGKFGEAS 519
Query: 359 SLYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAP----YSILL 414
+ E L++ D + + L + +R I LEL +F L ++IL+
Sbjct: 520 AFVKEMLENGWKPDLKTYSILLCGLCR---DRKIDLALELWHQFLQSGLETDVMMHNILI 576
Query: 415 IGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFE 474
G C K+D+A+ + + ++ N N + L+ G + A VI+ Y G +
Sbjct: 577 HGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQ 636
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 171/361 (47%), Gaps = 20/361 (5%)
Query: 4 RRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNE 63
R+ D+ T+N +L GFC+ GK++E++ L R++E + + Y+ LI G + + +E
Sbjct: 319 RKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDE 377
Query: 64 AHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIK 123
A ++ M G D Y I + GL G V +A+ + E+ G D + Y +II
Sbjct: 378 ATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIID 437
Query: 124 GFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFP 183
C +L+ A +L E+S H ++ LI + + + EA +M K GC P
Sbjct: 438 CLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRP 497
Query: 184 SAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSL--FFRLAQGSDHVSDSVSLQKKV 240
+ V++N LI GLCKAGK EA +M E G P L + L G
Sbjct: 498 TVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCG-------------- 543
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLS 300
+C + A +L Q SG+ D+ +NILI+ C G ++ A + +++ + +
Sbjct: 544 --LCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCT 601
Query: 301 PDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSL 360
+ VTY TL++G ++V A I +M K +P Y +M LC + +S A
Sbjct: 602 ANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEF 661
Query: 361 Y 361
+
Sbjct: 662 F 662
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 130/499 (26%), Positives = 221/499 (44%), Gaps = 63/499 (12%)
Query: 10 LATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYG 69
+ ++N LLN F + + + SL E G L Y+ LI K + + +A
Sbjct: 114 IRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLD 173
Query: 70 RMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIG 129
M K G PDV Y+ ++ L+ G++ +A+++F EM +RG+ PD CYN +I GF +
Sbjct: 174 WMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGF--LK 231
Query: 130 QLDHA------------RSLHVEISGHD---------GLHDTC----------------- 151
+ DH S++ + H+ G D C
Sbjct: 232 EKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLY 291
Query: 152 THTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM 211
T++ LI +C G V +A+ +FN++++ VT+N ++ G C+ GK+ E+ L+ M
Sbjct: 292 TYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIM 351
Query: 212 EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTY 271
E S ++ VS ++ + E G+ A + + G D TY
Sbjct: 352 EHKNSVNI--------------VSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTY 397
Query: 272 NILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLK 331
I I+ C G +N A + ++++ G D Y ++ID L + +R E+A + M K
Sbjct: 398 GIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSK 457
Query: 332 HVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRD-----NDSINALEEYFMKG 386
H E + V AL+ L R ++ A S +L + R N I L + G
Sbjct: 458 HGVELNSHVCNALIGGLIRDSRLGEA-SFFLREMGKNGCRPTVVSYNILICGLCKAGKFG 516
Query: 387 EVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCV 446
E ++ +LE ++ +L YSILL G C+ +K+D AL ++ + + +
Sbjct: 517 EASAFVKEMLENGWK---PDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHN 573
Query: 447 HLISGLCAKRNLYDAVVIF 465
LI GLC+ L DA+ +
Sbjct: 574 ILIHGLCSVGKLDDAMTVM 592
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 146/310 (47%), Gaps = 13/310 (4%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M + + D T+ + ++G C G + +A+ +++ +E G + + Y+S+ID K +R
Sbjct: 385 MPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKR 444
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
EA +L M K G+ + + ++ GL + R+GEA EM + G P YN
Sbjct: 445 LEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNI 504
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I G C G+ A + E+ + D T++IL+C +C+ + A E+++Q + G
Sbjct: 505 LICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSG 564
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKV 240
+ N LI+GLC GKLD+A + ME + ++ V+ +
Sbjct: 565 LETDVMMHNILIHGLCSVGKLDDAMTVMANME-------------HRNCTANLVTYNTLM 611
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLS 300
E + G + A + + G+ PDI +YN ++ C ++ A + F D + G+
Sbjct: 612 EGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIF 671
Query: 301 PDSVTYGTLI 310
P T+ L+
Sbjct: 672 PTVYTWNILV 681
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 101/467 (21%), Positives = 200/467 (42%), Gaps = 24/467 (5%)
Query: 50 SLIDGFFKARRYNEAHSLYGRMIK-GGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQ 108
S+I + K ++A ++ RM + G P + Y +L + + +FA
Sbjct: 83 SVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFET 142
Query: 109 RGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVRE 168
G+ P+ YN +IK C + + AR + D +++ +I ++ K G + +
Sbjct: 143 AGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDD 202
Query: 169 AQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSD 228
A E+F++M + G P +N LI+G K A ME L+ RL + S
Sbjct: 203 ALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTA------ME------LWDRLLEDSS 250
Query: 229 HVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAF 288
+ + + + + G+ + K+ ++ + D+ TY+ LI+ C AGN++ A
Sbjct: 251 VYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAE 310
Query: 289 KLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWL 348
+F +L + S D VTY T++ G R + +++ ++ +++H + Y L+ L
Sbjct: 311 SVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW-RIMEHKNSVNIVSYNILIKGL 369
Query: 349 CRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFM-----KGEVERAIRGLLELDFRFR 403
KI A ++ + +P + + F+ G V +A+ + E++
Sbjct: 370 LENGKIDEATMIW----RLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGG 425
Query: 404 DFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVV 463
++ Y+ ++ C+ K+++EA + + + + +N C LI GL L +A
Sbjct: 426 HLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEA-S 484
Query: 464 IFLYSLDKGFELGPKICKELLECLLVSQDKRKYAIDLIGRMKSRGYR 510
FL + K + +L C L K A + M G++
Sbjct: 485 FFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWK 531
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/465 (21%), Positives = 196/465 (42%), Gaps = 28/465 (6%)
Query: 76 ILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQR-GLLPDAHCYNAIIKGFCDIGQLDHA 134
+ P + +L+ L +E A +F + G A Y+ I++ + ++H
Sbjct: 3 VFPKSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHV 62
Query: 135 RSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQM-EKLGCFPSAVTFNALIN 193
+ I + D +I K M +A ++F +M E GC P+ ++N L+N
Sbjct: 63 SRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLN 122
Query: 194 GLCKAGKLDEAHLLFYKMEI-GKSPSL---------------------FFRLAQGSDHVS 231
+A + + LF E G +P+L F
Sbjct: 123 AFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKP 182
Query: 232 DSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLF 291
D S + + +AG+ +A +L ++++ GV PD+ YNILI+ F K + A +L+
Sbjct: 183 DVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELW 242
Query: 292 -KDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCR 350
+ L+ + P+ T+ +I GL + R +D KI + M ++ E Y +L+ LC
Sbjct: 243 DRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCD 302
Query: 351 GKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMK-GEVERAIRGLLELDFRFRDFNLAP 409
+ A S++ E + D + N + F + G+++ ++ L + N+
Sbjct: 303 AGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLE-LWRIMEHKNSVNIVS 361
Query: 410 YSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSL 469
Y+IL+ G + K+DEA +I+ ++ + T+ I GLC + A+ +
Sbjct: 362 YNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVE 421
Query: 470 DKGFELGPKICKELLECLLVSQDKRKYAIDLIGRMKSRGYRLHKY 514
G L +++C L + + + A +L+ M G L+ +
Sbjct: 422 SSGGHLDVYAYASIIDC-LCKKKRLEEASNLVKEMSKHGVELNSH 465
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 95/186 (51%)
Query: 10 LATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYG 69
+ ++N+L+ G CK GK EA + ++ + +G L YS L+ G + R+ + A L+
Sbjct: 499 VVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWH 558
Query: 70 RMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIG 129
+ ++ G+ DV+++ I++ GL + G++ +A+ + A M R + YN +++GF +G
Sbjct: 559 QFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVG 618
Query: 130 QLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFN 189
+ A + + D ++ ++ +C V A E F+ G FP+ T+N
Sbjct: 619 DSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWN 678
Query: 190 ALINGL 195
L+ +
Sbjct: 679 ILVRAV 684
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 68/122 (55%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
+ D+ N+L++G C GKL++A++++ +E L Y++L++GFFK N A
Sbjct: 565 LETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRAT 624
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
++G M K G+ PD+I Y +++GL V A++ F + G+ P + +N +++
Sbjct: 625 VIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAV 684
Query: 126 CD 127
+
Sbjct: 685 VN 686
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/425 (29%), Positives = 209/425 (49%), Gaps = 18/425 (4%)
Query: 10 LATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYG 69
L T+ +L++ FCK GK++EA+ L+ ++ G L Y+SLI GF + +L+
Sbjct: 212 LVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFD 271
Query: 70 RMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIG 129
+++ G P I Y ++RG G++ EA ++F MI+RG+ P+ + Y +I G C +G
Sbjct: 272 EVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVG 331
Query: 130 QLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFN 189
+ A L + D + T+ I+I ++CK G+V +A E+ M+K P +T+N
Sbjct: 332 KTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYN 391
Query: 190 ALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAG-- 247
L+ GLC G LDEA L Y M L S D +S + +C+
Sbjct: 392 ILLGGLCAKGDLDEASKLLYLM-----------LKDSSYTDPDVISYNALIHGLCKENRL 440
Query: 248 -QTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTY 306
Q L+ Y LL + +G D T NIL+NS KAG++N A +L+K + + +S TY
Sbjct: 441 HQALDIYDLLVEKLGAG---DRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTY 497
Query: 307 GTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLK 366
+IDG + A + M +PS Y L++ LC+ + A+ L+ E +
Sbjct: 498 TAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQR 557
Query: 367 SLPGRDNDSINALEEYFMK-GEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDE 425
D S N + + +K G+++ A L+ + +L YS L+ F + +DE
Sbjct: 558 DNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDE 617
Query: 426 ALIIF 430
A+ F
Sbjct: 618 AISFF 622
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 145/556 (26%), Positives = 245/556 (44%), Gaps = 62/556 (11%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R F ++ N+LL G C+ + +AVSLLR + R+ + Y+++I GF + +
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+A L M G ++ + I++ G++ EA+ EM GL D Y +
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I+GFCD G+LD ++L E+ T+ LI CK G ++EA E+F M + G
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG 312
Query: 181 CFPSAVTFNALINGLCKAGKLDEA-HLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKK 239
P+ T+ LI+GLC GK EA LL +E + P ++V+
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEP--------------NAVTYNII 358
Query: 240 VEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGL 299
+ +C+ G +A +++ + PD TYNIL+ C G+++ A KL L LK
Sbjct: 359 INKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLY-LMLKDS 417
Query: 300 S---PDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISL 356
S PD ++Y LI GL + R A I D +++ + L+ + ++
Sbjct: 418 SYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNK 477
Query: 357 AFSLYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAP----YSI 412
A L+ + S R++D+ A+ + F K + +GLL + R L P Y+
Sbjct: 478 AMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLL---CKMRVSELQPSVFDYNC 534
Query: 413 LLIGFCQAKKVDEALIIFSVLD---------EFNININPT-------SCVHLISGLCA-- 454
LL C+ +D+A +F + FNI I+ + S L+ G+
Sbjct: 535 LLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAG 594
Query: 455 -KRNLY----------------DAVVIFLYSLDKGFELGPKICKELLECLLVSQDKRKYA 497
+L+ +A+ F +D GFE IC +L+ +SQ +
Sbjct: 595 LSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLK-YCISQGETDKL 653
Query: 498 IDLIGRMKSRGYRLHK 513
+L+ ++ + L K
Sbjct: 654 TELVKKLVDKDIVLDK 669
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 127/479 (26%), Positives = 215/479 (44%), Gaps = 29/479 (6%)
Query: 14 NVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIK 73
N L+ + E A S R + I S L++ + + R+ A + M+K
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 74 GGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDH 133
G +V + I+L+GL G+AV + EM + L+PD YN +I+GFC+ +L+
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 134 ARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALIN 193
A L E+ G T ILI CK G + EA +M+ +G V + +LI
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255
Query: 194 GLCKAGKLDEAHLLFYK-MEIGKSPSL---------FFRLAQGSDHVS------------ 231
G C G+LD LF + +E G SP F +L Q +
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP 315
Query: 232 DSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLF 291
+ + ++ +C G+T A +LL + + P+ TYNI+IN CK G + A ++
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIV 375
Query: 292 KDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLK--HVCEPSFAVYKALMTWLC 349
+ ++ + PD++TY L+ GL ++A K+ MLK +P Y AL+ LC
Sbjct: 376 ELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLC 435
Query: 350 RGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMK-GEVERAIRGLLELDFRFRDFNLA 408
+ ++ A +Y ++ L D + N L +K G+V +A+ ++ N
Sbjct: 436 KENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSD 495
Query: 409 PYSILLIGFCQAK--KVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIF 465
Y+ ++ GFC+ V + L+ + E ++ +C L+S LC + +L A +F
Sbjct: 496 TYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNC--LLSSLCKEGSLDQAWRLF 552
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 145/314 (46%), Gaps = 17/314 (5%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGR--GIRLSGYSSLIDGFFKA 58
M RR + D T+N+LL G C +G L+EA LL L+ +D + Y++LI G K
Sbjct: 378 MKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKE 437
Query: 59 RRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCY 118
R ++A +Y +++ D + I+L G V +A++++ ++ ++ ++ Y
Sbjct: 438 NRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTY 497
Query: 119 NAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEK 178
A+I GFC G L+ A+ L ++ + + L+ +CK+G + +A +F +M++
Sbjct: 498 TAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQR 557
Query: 179 LGCFPSAVTFNALINGLCKAGKLDEAHLLFYKME-IGKSPSLFFRLAQGSDHVSDSVSLQ 237
FP V+FN +I+G KAG + A L M G SP LF +
Sbjct: 558 DNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLF--------------TYS 603
Query: 238 KKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLK 297
K + + G A ++ DSG PD + ++ G + +L K L K
Sbjct: 604 KLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDK 663
Query: 298 GLSPDSVTYGTLID 311
+ D T++D
Sbjct: 664 DIVLDKELTCTVMD 677
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 135/287 (47%), Gaps = 18/287 (6%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLL-ERDGRGIRLSGYSSLIDGFFKARRYNEAHSL 67
D+ ++N L++G CK+ +L +A+ + LL E+ G G R++ + L++ KA N+A L
Sbjct: 423 DVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVT-TNILLNSTLKAGDVNKAMEL 481
Query: 68 YGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCD 127
+ ++ I+ + Y M+ G G + A + +M L P YN ++ C
Sbjct: 482 WKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCK 541
Query: 128 IGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVT 187
G LD A L E+ + D + I+I K G ++ A+ + M + G P T
Sbjct: 542 EGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFT 601
Query: 188 FNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEA 246
++ LIN K G LDEA F KM + G P H+ DSV +++
Sbjct: 602 YSKLINRFLKLGYLDEAISFFDKMVDSGFEPDA---------HICDSV-----LKYCISQ 647
Query: 247 GQTLNAYKLLTQLADSGVVPDIKTYNILINSFCK-AGNMNGAFKLFK 292
G+T +L+ +L D +V D + +++ C + NM+ A +L +
Sbjct: 648 GETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLLR 694
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 3/161 (1%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M + Q + +N LL+ CK+G L++A L ++RD + ++ +IDG KA
Sbjct: 520 MRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGD 579
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
A SL M + G+ PD+ Y+ ++ G + EA+ F +M+ G PDAH ++
Sbjct: 580 IKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDS 639
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHD---TCTHTILIC 158
++K G+ D L ++ D + D TCT +C
Sbjct: 640 VLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMC 680
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 132/308 (42%), Gaps = 22/308 (7%)
Query: 220 FFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFC 279
F+R +D + VSL +E + +T A+ +L + G ++ +NIL+ C
Sbjct: 94 FYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLC 153
Query: 280 KAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFA 339
+ A L ++++ L PD +Y T+I G + E A ++ + M C S
Sbjct: 154 RNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLV 213
Query: 340 VYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSI---NALEEYFMKGEVERAIRGLL 396
+ L+ C+ K+ A +L+ +K + G + D + + + + GE++R
Sbjct: 214 TWGILIDAFCKAGKMDEAMG-FLKEMKFM-GLEADLVVYTSLIRGFCDCGELDRGKALFD 271
Query: 397 ELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKR 456
E+ R Y+ L+ GFC+ ++ EA IF + E + N + LI GLC
Sbjct: 272 EVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVG 331
Query: 457 NLYDAVVIFLYSLDKGFELGP--------KICKELLECLLVSQDKRKYAIDLIGRMKSRG 508
+A+ + ++K E K+CK+ LV+ A++++ MK R
Sbjct: 332 KTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKD----GLVAD-----AVEIVELMKKRR 382
Query: 509 YRLHKYQY 516
R Y
Sbjct: 383 TRPDNITY 390
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 162/316 (51%), Gaps = 17/316 (5%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
F+ D+ +N +++G CK G + +AV L +ERDG Y+SL+ G + R+++A
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
L M+ I+P+VI + ++ EG+ EA+K++ EM +R + PD YN++I G
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
C G++D A+ + + L D T+ LI CK V E ++F +M + G
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 349
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCE 245
+T+N +I G +AG+ D A +F +M+ + + L G +C
Sbjct: 350 ITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYG----------------LCM 393
Query: 246 AGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVT 305
+ A L + S + DI TYNI+I+ CK GN+ A+ LF+ L KGL PD V+
Sbjct: 394 NWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVS 453
Query: 306 YGTLIDGLYRVEREED 321
Y T+I G R +R+ D
Sbjct: 454 YTTMISGFCR-KRQWD 468
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 200/428 (46%), Gaps = 52/428 (12%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
DL ++N+++N C+ + A+S++ + + G + SSLI+GF + R +A L
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 162
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
+M + G PDV++Y ++ G G V +AV++F M + G+ DA YN+++ G C
Sbjct: 163 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 222
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
G+ A L ++ D + + T T +I K+G EA +++ +M + P T+
Sbjct: 223 GRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTY 282
Query: 189 NALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQ 248
N+LINGLC G++DEA
Sbjct: 283 NSLINGLCMHGRVDEAK------------------------------------------- 299
Query: 249 TLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGT 308
++L + G +PD+ TYN LIN FCK+ ++ KLF+++ +GL D++TY T
Sbjct: 300 -----QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNT 354
Query: 309 LIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSL 368
+I G ++ R + A +I M P+ Y L+ LC ++ A L+ KS
Sbjct: 355 IIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSE 411
Query: 369 PGRDNDSINALEEYFMK-GEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEAL 427
D + N + K G VE A L + ++ Y+ ++ GFC+ ++ D++
Sbjct: 412 IELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSD 471
Query: 428 IIFSVLDE 435
+++ + E
Sbjct: 472 LLYRKMQE 479
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 199/405 (49%), Gaps = 19/405 (4%)
Query: 63 EAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAII 122
E L+ +MI+ LP ++ ++ +L ++ + +F M G+ D + YN +I
Sbjct: 52 EEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVI 111
Query: 123 KGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCF 182
C + A S+ ++ D T + LI C+ V +A ++ ++ME++G
Sbjct: 112 NCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFR 171
Query: 183 PSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHV-SDSVSLQKKVE 241
P V +N +I+G CK G +++A LF +ME D V +D+V+ V
Sbjct: 172 PDVVIYNTIIDGSCKIGLVNDAVELFDRME--------------RDGVRADAVTYNSLVA 217
Query: 242 HMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSP 301
+C +G+ +A +L+ + +VP++ T+ +I+ F K G + A KL++++ + + P
Sbjct: 218 GLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDP 277
Query: 302 DSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLY 361
D TY +LI+GL R ++A ++ D M+ C P Y L+ C+ K++ L+
Sbjct: 278 DVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLF 337
Query: 362 LEYLKSLPGRDNDSINAL-EEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQA 420
E + D + N + + YF G + A +D R N+ YSILL G C
Sbjct: 338 REMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRP---NIRTYSILLYGLCMN 394
Query: 421 KKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIF 465
+V++AL++F + + I ++ T+ +I G+C N+ DA +F
Sbjct: 395 WRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLF 439
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 134/301 (44%), Gaps = 51/301 (16%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M MR ++ TF +++ F K+GK EA+ L + R + Y+SLI+G R
Sbjct: 235 MVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGR 294
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+EA + M+ G LPDV+ Y ++ G RV E K+F EM QRGL+ D YN
Sbjct: 295 VDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNT 354
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
II+G+ G+ D A+ + S D + T++IL+ +C V +A +F M+K
Sbjct: 355 IIQGYFQAGRPDAAQEI---FSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSE 411
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKV 240
T+N +I+G+CK G +++A LF
Sbjct: 412 IELDITTYNIVIHGMCKIGNVEDAWDLF-------------------------------- 439
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLS 300
L+ G+ PD+ +Y +I+ FC+ + + L++ +Q GL
Sbjct: 440 ----------------RSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 483
Query: 301 P 301
P
Sbjct: 484 P 484
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 171/339 (50%), Gaps = 13/339 (3%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
+ + TF LLNGFC+ ++ +A+ + + G + Y+++IDG K+++ + A
Sbjct: 148 EPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALD 207
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
L RM K GI PDV+ Y ++ GL + GR +A +M + M +R + PD +NA+I
Sbjct: 208 LLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACV 267
Query: 127 DIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAV 186
G++ A + E+ D T+++LI +C + EA+EMF M GCFP V
Sbjct: 268 KEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVV 327
Query: 187 TFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEA 246
T++ LING CK+ K++ LF +M +G V ++V+ ++ C A
Sbjct: 328 TYSILINGYCKSKKVEHGMKLFCEMS-----------QRGV--VRNTVTYTILIQGYCRA 374
Query: 247 GQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTY 306
G+ A ++ ++ GV P+I TYN+L++ C G + A + D+Q G+ D VTY
Sbjct: 375 GKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTY 434
Query: 307 GTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALM 345
+I G+ + DA+ I + P Y +M
Sbjct: 435 NIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMM 473
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 181/361 (50%), Gaps = 13/361 (3%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M M +L T N+LLN FC+ +L A+S L + + G + + SL++GF + R
Sbjct: 107 MQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDR 166
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+A ++ +M+ G P+V++Y ++ GL +V A+ + M + G+ PD YN+
Sbjct: 167 VYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNS 226
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I G C G+ A + ++ + D T LI K+G V EA+E + +M +
Sbjct: 227 LISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRS 286
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKV 240
P VT++ LI GLC +LDEA +F F +++G D V+ +
Sbjct: 287 LDPDIVTYSLLIYGLCMYSRLDEAEEMF-----------GFMVSKGC--FPDVVTYSILI 333
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLS 300
C++ + + KL +++ GVV + TY ILI +C+AG +N A ++F+ + G+
Sbjct: 334 NGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVH 393
Query: 301 PDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSL 360
P+ +TY L+ GL + E A I M K+ + Y ++ +C+ +++ A+ +
Sbjct: 394 PNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDI 453
Query: 361 Y 361
Y
Sbjct: 454 Y 454
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 157/294 (53%), Gaps = 13/294 (4%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D+ T+N L++G C G+ +A ++ + + + +++LID K R +EA Y
Sbjct: 220 DVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFY 279
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
MI+ + PD++ Y++++ GL R+ EA +MF M+ +G PD Y+ +I G+C
Sbjct: 280 EEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKS 339
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
+++H L E+S + +T T+TILI C+ G + A+E+F +M G P+ +T+
Sbjct: 340 KKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITY 399
Query: 189 NALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQ 248
N L++GLC GK+++A ++ M+ G D +D V+ + MC+AG+
Sbjct: 400 NVLLHGLCDNGKIEKALVILADMQ-----------KNGMD--ADIVTYNIIIRGMCKAGE 446
Query: 249 TLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPD 302
+A+ + L G++PDI TY ++ K G A LF+ ++ G+ P+
Sbjct: 447 VADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 192/426 (45%), Gaps = 49/426 (11%)
Query: 10 LATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYG 69
+A F+ LL+ K K + + L ++ G L + L++ F + + + A S G
Sbjct: 81 IADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLG 140
Query: 70 RMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIG 129
+MIK G P ++ + +L G RV +A+ MF +M+ G P+ YN II G C
Sbjct: 141 KMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSK 200
Query: 130 QLDHARSLHVEISGHDGL-HDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
Q+D+A L + DG+ D T+ LI +C G +A M + M K +P TF
Sbjct: 201 QVDNALDLLNRME-KDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTF 259
Query: 189 NALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQ 248
NALI+ K G++ EA FY+ I +S D V+ + +C +
Sbjct: 260 NALIDACVKEGRVSEAEE-FYEEMIRRSLD------------PDIVTYSLLIYGLCMYSR 306
Query: 249 TLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGT 308
A ++ + G PD+ TY+ILIN +CK+ + KLF ++ +G+ ++VTY
Sbjct: 307 LDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTI 366
Query: 309 LIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSL 368
LI G R + A +I M+ P+ Y L+ LC
Sbjct: 367 LIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLC------------------- 407
Query: 369 PGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALI 428
DN G++E+A+ L ++ D ++ Y+I++ G C+A +V +A
Sbjct: 408 ---DN------------GKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWD 452
Query: 429 IFSVLD 434
I+ L+
Sbjct: 453 IYCSLN 458
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 200/424 (47%), Gaps = 20/424 (4%)
Query: 46 SGYSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAE 105
S Y ++ + + +++ L+ M++ LP + ++ +L +S + + ++ +
Sbjct: 47 SDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQ 106
Query: 106 MIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEIS--GHDGLHDTCTHTILICEMCKK 163
M G+ + N ++ FC QL A S ++ GH+ T L+ C+
Sbjct: 107 MQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHE--PSIVTFGSLLNGFCRG 164
Query: 164 GMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEI-GKSPSLFFR 222
V +A MF+QM +G P+ V +N +I+GLCK+ ++D A L +ME G P
Sbjct: 165 DRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGP----- 219
Query: 223 LAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAG 282
D V+ + +C +G+ +A ++++ + + PD+ T+N LI++ K G
Sbjct: 220 ---------DVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEG 270
Query: 283 NMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYK 342
++ A + ++++ + L PD VTY LI GL R ++A ++ M+ C P Y
Sbjct: 271 RVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYS 330
Query: 343 ALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINAL-EEYFMKGEVERAIRGLLELDFR 401
L+ C+ KK+ L+ E + R+ + L + Y G++ A + F
Sbjct: 331 ILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFC 390
Query: 402 FRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDA 461
N+ Y++LL G C K+++AL+I + + + ++ + + +I G+C + DA
Sbjct: 391 GVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADA 450
Query: 462 VVIF 465
I+
Sbjct: 451 WDIY 454
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 110/212 (51%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R D+ T+++L+ G C +L+EA + + G + YS LI+G+ K+++
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKK 341
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
L+ M + G++ + + Y I+++G G++ A ++F M+ G+ P+ YN
Sbjct: 342 VEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNV 401
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
++ G CD G+++ A + ++ + D T+ I+I MCK G V +A +++ + G
Sbjct: 402 LLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQG 461
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKME 212
P T+ ++ GL K G EA LF KM+
Sbjct: 462 LMPDIWTYTTMMLGLYKKGLRREADALFRKMK 493
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 89/184 (48%), Gaps = 35/184 (19%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R R+ T+ +L+ G+C+ GKL
Sbjct: 352 MSQRGVVRNTVTYTILIQGYCRAGKL---------------------------------- 377
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
N A ++ RM+ G+ P++I Y ++L GL + G++ +A+ + A+M + G+ D YN
Sbjct: 378 -NVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNI 436
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
II+G C G++ A ++ ++ + D T+T ++ + KKG+ REA +F +M++ G
Sbjct: 437 IIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDG 496
Query: 181 CFPS 184
P+
Sbjct: 497 ILPN 500
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 118/265 (44%), Gaps = 6/265 (2%)
Query: 211 MEIGKSPSLFFRLAQGSD--HVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDI 268
M++ S LFF + Q ++D L + M + + ++ + L G+ ++
Sbjct: 60 MKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQML---GIPHNL 116
Query: 269 KTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDH 328
T NIL+N FC+ ++ A + G P VT+G+L++G R +R DA + D
Sbjct: 117 CTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQ 176
Query: 329 MLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINAL-EEYFMKGE 387
M+ +P+ +Y ++ LC+ K++ A L K G D + N+L G
Sbjct: 177 MVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGR 236
Query: 388 VERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVH 447
A R + + R ++ ++ L+ + +V EA + + +++ + +
Sbjct: 237 WSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSL 296
Query: 448 LISGLCAKRNLYDAVVIFLYSLDKG 472
LI GLC L +A +F + + KG
Sbjct: 297 LIYGLCMYSRLDEAEEMFGFMVSKG 321
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 124/505 (24%), Positives = 224/505 (44%), Gaps = 51/505 (10%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
+L T+++ +N FC++ +L A+++L + + G G + +SL++GF R +EA +
Sbjct: 107 SHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVA 166
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
L +M++ G PD + + ++ GL + EAV + M+ +G PD Y A+I G C
Sbjct: 167 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC 226
Query: 127 DIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAV 186
G+ D A +L ++ D + +I +CK + +A ++FN+ME G P
Sbjct: 227 KRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVF 286
Query: 187 TFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCE 245
T+N LI+ LC G+ +A L M E +P L F ++ +
Sbjct: 287 TYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVF--------------FNALIDAFVK 332
Query: 246 AGQTLNAYKLLTQLADSG-VVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSV 304
G+ + A KL ++ S PD+ YN LI FCK + ++F+++ +GL ++V
Sbjct: 333 EGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV 392
Query: 305 TYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEY 364
TY TLI G ++ ++A + M+ P Y L+ LC + A ++
Sbjct: 393 TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVF--- 449
Query: 365 LKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVD 424
EY K +++ ++ Y+ ++ C+A KV+
Sbjct: 450 ----------------EYMQKRDMK---------------LDIVTYTTMIEALCKAGKVE 478
Query: 425 EALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKELL 484
+ +F L + N + ++SG C K +A +F+ + G L+
Sbjct: 479 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLI 538
Query: 485 ECLLVSQDKRKYAIDLIGRMKSRGY 509
L D+ A +LI M+S G+
Sbjct: 539 RARLRDGDEAASA-ELIKEMRSCGF 562
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 182/375 (48%), Gaps = 14/375 (3%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
+Q D TF L++G + K EAV+L+ + G L Y ++I+G K + A
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
+L +M KG I DV++Y ++ GL + +A +F +M +G+ PD YN +I
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG-CFPS 184
C+ G+ A L ++ + D LI K+G + EA++++++M K CFP
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355
Query: 185 AVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMC 244
V +N LI G CK +++E ME+ FR V ++V+ +
Sbjct: 356 VVAYNTLIKGFCKYKRVEEG------MEV-------FREMSQRGLVGNTVTYTTLIHGFF 402
Query: 245 EAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSV 304
+A NA + Q+ GV PDI TYNIL++ C GN+ A +F+ +Q + + D V
Sbjct: 403 QARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIV 462
Query: 305 TYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEY 364
TY T+I+ L + + ED + + + +P+ Y +M+ CR A +L++E
Sbjct: 463 TYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEM 522
Query: 365 LKSLPGRDNDSINAL 379
+ P ++ + N L
Sbjct: 523 KEDGPLPNSGTYNTL 537
Score = 158 bits (399), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 171/347 (49%), Gaps = 16/347 (4%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M ++ Q DL T+ ++NG CK+G+ + A++LL +E+ + Y+++IDG K +
Sbjct: 206 MVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKH 265
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
++A L+ +M GI PDV Y ++ L N GR +A ++ ++M+++ + PD +NA
Sbjct: 266 MDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNA 325
Query: 121 IIKGFCDIGQLDHARSLHVE-ISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKL 179
+I F G+L A L+ E + D + LI CK V E E+F +M +
Sbjct: 326 LIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQR 385
Query: 180 GCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHV-SDSVSLQK 238
G + VT+ LI+G +A D A ++F +M SD V D ++
Sbjct: 386 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV--------------SDGVHPDIMTYNI 431
Query: 239 KVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKG 298
++ +C G A + + + DI TY +I + CKAG + + LF L LKG
Sbjct: 432 LLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKG 491
Query: 299 LSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALM 345
+ P+ VTY T++ G R +E+A + M + P+ Y L+
Sbjct: 492 VKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLI 538
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/458 (24%), Positives = 197/458 (43%), Gaps = 50/458 (10%)
Query: 10 LATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYG 69
+ F+ LL+ K K + +SL ++ G L YS I+ F + + + A ++ G
Sbjct: 75 IVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILG 134
Query: 70 RMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIG 129
+M+K G P ++ +L G + R+ EAV + +M++ G P
Sbjct: 135 KMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP---------------- 178
Query: 130 QLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFN 189
DT T T L+ + + EA + +M GC P VT+
Sbjct: 179 -------------------DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYG 219
Query: 190 ALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQT 249
A+INGLCK G+ D A L KME GK + D V ++ +C+
Sbjct: 220 AVINGLCKRGEPDLALNLLNKMEKGKIEA-------------DVVIYNTIIDGLCKYKHM 266
Query: 250 LNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTL 309
+A+ L ++ G+ PD+ TYN LI+ C G + A +L D+ K ++PD V + L
Sbjct: 267 DDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNAL 326
Query: 310 IDGLYRVEREEDAFKIRDHMLKHV-CEPSFAVYKALMTWLCRGKKISLAFSLYLEY-LKS 367
ID + + +A K+ D M+K C P Y L+ C+ K++ ++ E +
Sbjct: 327 IDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRG 386
Query: 368 LPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEAL 427
L G + +F + + A ++ ++ Y+ILL G C V+ AL
Sbjct: 387 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETAL 446
Query: 428 IIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIF 465
++F + + ++ ++ + +I LC + D +F
Sbjct: 447 VVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLF 484
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/453 (25%), Positives = 204/453 (45%), Gaps = 29/453 (6%)
Query: 95 RVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHT 154
++ +A+ +F +M++ P ++ ++ + + D SL ++ H+ T++
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 155 ILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EI 213
I I C++ + A + +M KLG PS VT N+L+NG C ++ EA L +M E+
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 214 GKSPS--LFFRLAQG---SDHVSDSVSLQKK----------------VEHMCEAGQTLNA 252
G P F L G + S++V+L ++ + +C+ G+ A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 253 YKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDG 312
LL ++ + D+ YN +I+ CK +M+ AF LF ++ KG+ PD TY LI
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 313 LYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKS---LP 369
L R DA ++ ML+ P + AL+ + K+ A LY E +KS P
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354
Query: 370 GRDNDSINALEEYFMK-GEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALI 428
D + N L + F K VE + E+ R N Y+ L+ GF QA+ D A +
Sbjct: 355 --DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 412
Query: 429 IFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKELLECLL 488
+F + ++ + + L+ GLC N+ A+V+F Y + +L ++E L
Sbjct: 413 VFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEA-L 471
Query: 489 VSQDKRKYAIDLIGRMKSRGYRLHKYQYRQTIS 521
K + DL + +G + + Y +S
Sbjct: 472 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMS 504
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 138/315 (43%), Gaps = 49/315 (15%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIR-LSGYSSLIDGFFKAR 59
M + DL FN L++ F K+GKL EA L + + + Y++LI GF K +
Sbjct: 311 MLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYK 370
Query: 60 RYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYN 119
R E ++ M + G++ + + Y ++ G A +F +M+ G+ PD YN
Sbjct: 371 RVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYN 430
Query: 120 AIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKL 179
++ G C+ G ++ A + + D D T+T +I +CK G V + ++F +
Sbjct: 431 ILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK 490
Query: 180 GCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKK 239
G P+ VT+ +++G C+ G +EA LF +M+
Sbjct: 491 GVKPNVVTYTTMMSGFCRKGLKEEADALFVEMK--------------------------- 523
Query: 240 VEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGL 299
+ G +P+ TYN LI + + G+ + +L K+++ G
Sbjct: 524 ---------------------EDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGF 562
Query: 300 SPDSVTYGTLIDGLY 314
+ D+ T+G + + L+
Sbjct: 563 AGDASTFGLVTNMLH 577
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 36/233 (15%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D+ +N L+ GFCK ++EE + + R + + G Y++LI GFF+AR + A ++
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQR------------------- 109
+M+ G+ PD++ Y I+L GL N G V A+ +F M +R
Sbjct: 415 KQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKA 474
Query: 110 ----------------GLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTH 153
G+ P+ Y ++ GFC G + A +L VE+ L ++ T+
Sbjct: 475 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTY 534
Query: 154 TILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHL 206
LI + G + E+ +M G A TF L+ + G+LD++ L
Sbjct: 535 NTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF-GLVTNMLHDGRLDKSFL 586
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 127/488 (26%), Positives = 218/488 (44%), Gaps = 58/488 (11%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R D+ +F + + FCK + A+ LL + G + + Y +++ GF++
Sbjct: 137 MRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENF 196
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
E + L+G+M+ G+ + + +LR L +G V E K+ ++I+RG+LP+ YN
Sbjct: 197 KAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNL 256
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
I+G C G+LD A + + D T+ LI +CK +EA+ +M G
Sbjct: 257 FIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEG 316
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHL-----------------------LFYKMEIGKSP 217
P + T+N LI G CK G + A L ++ E ++
Sbjct: 317 LEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRAL 376
Query: 218 SLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINS 277
+LF A G + + ++ + G L A +L ++++ G++P+++T+NIL+N
Sbjct: 377 ALFNE-ALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNG 435
Query: 278 FCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPS 337
CK G ++ A L K + KG PD T+ LI G + E+A +I D ML + +P
Sbjct: 436 LCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPD 495
Query: 338 FAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLE 397
Y +L+ LC+ K + +E Y K VE+
Sbjct: 496 VYTYNSLLNGLCKTSKFE---------------------DVMETY--KTMVEKGCAP--- 529
Query: 398 LDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRN 457
NL ++ILL C+ +K+DEAL + + ++N + + LI G C +
Sbjct: 530 --------NLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581
Query: 458 LYDAVVIF 465
L A +F
Sbjct: 582 LDGAYTLF 589
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 125/471 (26%), Positives = 217/471 (46%), Gaps = 23/471 (4%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
+L T+N+ + G C++G+L+ AV ++ L G + Y++LI G K ++ EA
Sbjct: 250 NLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYL 309
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
G+M+ G+ PD Y ++ G G V A ++ + + G +PD Y ++I G C
Sbjct: 310 GKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHE 369
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
G+ + A +L E G + + LI + +GM+ EA ++ N+M + G P TF
Sbjct: 370 GETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTF 429
Query: 189 NALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAG 247
N L+NGLCK G + +A L M G P +F + + S Q K+E
Sbjct: 430 NILVNGLCKMGCVSDADGLVKVMISKGYFPDIF-----TFNILIHGYSTQLKME------ 478
Query: 248 QTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYG 307
NA ++L + D+GV PD+ TYN L+N CK + +K + KG +P+ T+
Sbjct: 479 ---NALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFN 535
Query: 308 TLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEY--- 364
L++ L R + ++A + + M P + L+ C+ + A++L+ +
Sbjct: 536 ILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEA 595
Query: 365 --LKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKK 422
+ S N I+A E K V A + E+ R + Y +++ GFC+
Sbjct: 596 YKVSSSTPTYNIIIHAFTE---KLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGN 652
Query: 423 VDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGF 473
V+ + E + T+ +I+ LC + +Y+A I + KG
Sbjct: 653 VNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGL 703
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 131/502 (26%), Positives = 226/502 (45%), Gaps = 18/502 (3%)
Query: 10 LATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYG 69
L+TFN LL CK+G ++E LL + + G L Y+ I G + + A + G
Sbjct: 216 LSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVG 275
Query: 70 RMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIG 129
+I+ G PDVI Y ++ GL + EA +M+ GL PD++ YN +I G+C G
Sbjct: 276 CLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG 335
Query: 130 QLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFN 189
+ A + + + + D T+ LI +C +G A +FN+ G P+ + +N
Sbjct: 336 MVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYN 395
Query: 190 ALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQ 248
LI GL G + EA L +M E G P + + V +C+ G
Sbjct: 396 TLIKGLSNQGMILEAAQLANEMSEKGLIPEV--------------QTFNILVNGLCKMGC 441
Query: 249 TLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGT 308
+A L+ + G PDI T+NILI+ + M A ++ + G+ PD TY +
Sbjct: 442 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNS 501
Query: 309 LIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSL 368
L++GL + + ED + M++ C P+ + L+ LCR +K+ A L E
Sbjct: 502 LLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKS 561
Query: 369 PGRDNDSINALEEYFMK-GEVERAIRGLLELDFRFRDFNLAP-YSILLIGFCQAKKVDEA 426
D + L + F K G+++ A +++ ++ + P Y+I++ F + V A
Sbjct: 562 VNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMA 621
Query: 427 LIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKELLEC 486
+F + + + + + ++ G C N+ L ++ GF ++ C
Sbjct: 622 EKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINC 681
Query: 487 LLVSQDKRKYAIDLIGRMKSRG 508
L V +D+ A +I RM +G
Sbjct: 682 LCV-EDRVYEAAGIIHRMVQKG 702
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 116/505 (22%), Positives = 208/505 (41%), Gaps = 52/505 (10%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSG-YSSLIDGFFKARRYNEA 64
F+ L+T+ ++ GK E +L + + L G Y + + + + EA
Sbjct: 36 FKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEA 95
Query: 65 HSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKG 124
+++ RM P V Y ++ L + G +A K++ M RG+ PD + + +K
Sbjct: 96 VNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKS 155
Query: 125 FCDIGQLDHARSLHVEISGH-------------DGLHDT--------------------C 151
FC + A L +S G ++ C
Sbjct: 156 FCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLC 215
Query: 152 THTI--LICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEA-HLLF 208
T L+ +CKKG V+E +++ +++ K G P+ T+N I GLC+ G+LD A ++
Sbjct: 216 LSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVG 275
Query: 209 YKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDI 268
+E G P D ++ + +C+ + A L ++ + G+ PD
Sbjct: 276 CLIEQGPKP--------------DVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDS 321
Query: 269 KTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDH 328
TYN LI +CK G + A ++ D G PD TY +LIDGL A + +
Sbjct: 322 YTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNE 381
Query: 329 MLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEV 388
L +P+ +Y L+ L I A L E + + + N L K
Sbjct: 382 ALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGC 441
Query: 389 ERAIRGLLELDFRFRDF-NLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVH 447
GL+++ F ++ ++IL+ G+ K++ AL I V+ + ++ + +
Sbjct: 442 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNS 501
Query: 448 LISGLCAKRNLYDAVVIFLYSLDKG 472
L++GLC D + + ++KG
Sbjct: 502 LLNGLCKTSKFEDVMETYKTMVEKG 526
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 169/394 (42%), Gaps = 16/394 (4%)
Query: 82 LYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEI 141
+Y ++ +G+V EAV +F M P YNAI+ D G D A +++ +
Sbjct: 78 VYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRM 137
Query: 142 SGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKL 201
D + TI + CK A + N M GC + V + ++ G +
Sbjct: 138 RDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFK 197
Query: 202 DEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVS-LQKKVEHMCEAGQTLNAYKLLTQLA 260
E + LF KM LA G VS +S K + +C+ G KLL ++
Sbjct: 198 AEGYELFGKM-----------LASG---VSLCLSTFNKLLRVLCKKGDVKECEKLLDKVI 243
Query: 261 DSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREE 320
GV+P++ TYN+ I C+ G ++GA ++ L +G PD +TY LI GL + + +
Sbjct: 244 KRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQ 303
Query: 321 DAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALE 380
+A M+ EP Y L+ C+G + LA + + + + D + +L
Sbjct: 304 EAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLI 363
Query: 381 EYFM-KGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNIN 439
+ +GE RA+ E + N+ Y+ L+ G + EA + + + E +
Sbjct: 364 DGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLI 423
Query: 440 INPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGF 473
+ L++GLC + DA + + KG+
Sbjct: 424 PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGY 457
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 176/352 (50%), Gaps = 20/352 (5%)
Query: 4 RRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNE 63
R Q + +FN L+NG+CK G L+E L +E+ + YS+LI+ K + +
Sbjct: 269 RSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDG 328
Query: 64 AHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIK 123
AH L+ M K G++P+ +++ ++ G S G + + + +M+ +GL PD YN ++
Sbjct: 329 AHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVN 388
Query: 124 GFCDIGQLDHARSLHVEISGHDGLH-DTCTHTILICEMCKKGMVREAQEMFNQMEKLGCF 182
GFC G L AR++ V+ GL D T+T LI C+ G V A E+ +M++ G
Sbjct: 389 GFCKNGDLVAARNI-VDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIE 447
Query: 183 PSAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVE 241
V F+AL+ G+CK G++ +A +M G P D V+ ++
Sbjct: 448 LDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKP--------------DDVTYTMMMD 493
Query: 242 HMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSP 301
C+ G +KLL ++ G VP + TYN+L+N CK G M A L + G+ P
Sbjct: 494 AFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVP 553
Query: 302 DSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKK 353
D +TY TL++G +R + I+ + V + A YK+++ L R K
Sbjct: 554 DDITYNTLLEGHHRHANSSKRY-IQKPEIGIVAD--LASYKSIVNELDRASK 602
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 170/340 (50%), Gaps = 13/340 (3%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
F ++ FN+L+N FCK+G + +A + + + + +++LI+G+ K +E
Sbjct: 236 FPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGF 295
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
L +M K PDV Y+ ++ L E ++ A +F EM +RGL+P+ + +I G
Sbjct: 296 RLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGH 355
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
G++D + + ++ D + L+ CK G + A+ + + M + G P
Sbjct: 356 SRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDK 415
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCE 245
+T+ LI+G C+ G ++ A +EI K + Q + D V V MC+
Sbjct: 416 ITYTTLIDGFCRGGDVETA------LEIRK------EMDQNGIEL-DRVGFSALVCGMCK 462
Query: 246 AGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVT 305
G+ ++A + L ++ +G+ PD TY +++++FCK G+ FKL K++Q G P VT
Sbjct: 463 EGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVT 522
Query: 306 YGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALM 345
Y L++GL ++ + ++A + D ML P Y L+
Sbjct: 523 YNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLL 562
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 190/430 (44%), Gaps = 51/430 (11%)
Query: 14 NVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIK 73
+ L+ + G + +A+ RL + + + G +L+D K Y ++
Sbjct: 174 DALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILD 233
Query: 74 GGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDH 133
G +V ++ I++ EG + +A K+F E+ +R L P +N +I G+C +G LD
Sbjct: 234 AGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDE 293
Query: 134 ARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALIN 193
L ++ D T++ LI +CK+ + A +F++M K G P+ V F LI+
Sbjct: 294 GFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIH 353
Query: 194 GLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAY 253
G + G++D M E+ Q
Sbjct: 354 GHSRNGEID---------------------------------------LMKESYQ----- 369
Query: 254 KLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGL 313
K+L++ G+ PDI YN L+N FCK G++ A + + +GL PD +TY TLIDG
Sbjct: 370 KMLSK----GLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGF 425
Query: 314 YRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDN 373
R E A +IR M ++ E + AL+ +C+ ++ A E L++ D+
Sbjct: 426 CRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDD 485
Query: 374 DSINALEEYF-MKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSV 432
+ + + F KG+ + + L E+ ++ Y++LL G C+ ++ A ++
Sbjct: 486 VTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDA 545
Query: 433 LDEFNININP 442
+ NI + P
Sbjct: 546 M--LNIGVVP 553
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 99/196 (50%), Gaps = 4/196 (2%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLS--GYSSLIDGFFKA 58
M + Q D+ +N L+NGFCK G L A +++ + R RG+R Y++LIDGF +
Sbjct: 371 MLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIR--RGLRPDKITYTTLIDGFCRG 428
Query: 59 RRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCY 118
A + M + GI D + ++ ++ G+ EGRV +A + EM++ G+ PD Y
Sbjct: 429 GDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTY 488
Query: 119 NAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEK 178
++ FC G L E+ + T+ +L+ +CK G ++ A + + M
Sbjct: 489 TMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLN 548
Query: 179 LGCFPSAVTFNALING 194
+G P +T+N L+ G
Sbjct: 549 IGVVPDDITYNTLLEG 564
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 117/281 (41%), Gaps = 48/281 (17%)
Query: 182 FPSAV-TFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKV 240
FP V FN L+N CK G + +A +F EI K R Q + VS +
Sbjct: 236 FPLNVYVFNILMNKFCKEGNISDAQKVFD--EITK------RSLQPT-----VVSFNTLI 282
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLS 300
C+ G ++L Q+ S PD+ TY+ LIN+ CK M+GA LF ++ +GL
Sbjct: 283 NGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLI 342
Query: 301 PDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSL 360
P+ V + TLI G R + + ML +P +Y L+ C+ + A ++
Sbjct: 343 PNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNI 402
Query: 361 YLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQA 420
+ G + R +R + Y+ L+ GFC+
Sbjct: 403 -----------------------VDGMIRRGLRP-----------DKITYTTLIDGFCRG 428
Query: 421 KKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDA 461
V+ AL I +D+ I ++ L+ G+C + + DA
Sbjct: 429 GDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDA 469
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 98/202 (48%), Gaps = 7/202 (3%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R + D T+ L++GFC+ G +E A+ + + ++++G + G+S+L+ G K R
Sbjct: 406 MIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGR 465
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+A M++ GI PD + Y +M+ +G K+ EM G +P YN
Sbjct: 466 VIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNV 525
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQ--EMFNQMEK 178
++ G C +GQ+ +A L + + D T+ L+ +G R A + + Q +
Sbjct: 526 LLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLL-----EGHHRHANSSKRYIQKPE 580
Query: 179 LGCFPSAVTFNALINGLCKAGK 200
+G ++ +++N L +A K
Sbjct: 581 IGIVADLASYKSIVNELDRASK 602
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 131/507 (25%), Positives = 235/507 (46%), Gaps = 17/507 (3%)
Query: 5 RFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEA 64
R DL ++N+L+N FC++ +L A+++L + + G + SSL++G+ +R +EA
Sbjct: 110 RISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEA 169
Query: 65 HSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKG 124
+L +M P+ + + ++ GL + EAV + M+ RG PD Y ++ G
Sbjct: 170 VALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNG 229
Query: 125 FCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPS 184
C G +D A SL ++ D +T +I +C V +A +F +M+ G P+
Sbjct: 230 LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 289
Query: 185 AVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHM 243
VT+N+LI LC G+ +A L M E +P++ V+ ++
Sbjct: 290 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV--------------VTFSALIDAF 335
Query: 244 CEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDS 303
+ G+ + A KL ++ + PDI TY+ LIN FC ++ A +F+ + K P+
Sbjct: 336 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 395
Query: 304 VTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLE 363
VTY TLI G + +R E+ ++ M + + Y L+ L + +A ++ +
Sbjct: 396 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 455
Query: 364 YLKSLPGRDNDSINALEEYFMK-GEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKK 422
+ D + + L + K G++E+A+ L + ++ Y+I++ G C+A K
Sbjct: 456 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515
Query: 423 VDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKE 482
V++ +F L + N +ISG C K +A +F + G
Sbjct: 516 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNT 575
Query: 483 LLECLLVSQDKRKYAIDLIGRMKSRGY 509
L+ L DK A +LI M+S G+
Sbjct: 576 LIRARLRDGDKAASA-ELIKEMRSCGF 601
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 181/361 (50%), Gaps = 13/361 (3%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M++ +Q + TFN L++G K EAV+L+ + G L Y ++++G K
Sbjct: 176 MFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD 235
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+ A SL +M KG I DV++Y ++ L N V +A+ +F EM +G+ P+ YN+
Sbjct: 236 IDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 295
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I+ C+ G+ A L ++ + T + LI K+G + EA++++++M K
Sbjct: 296 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 355
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKV 240
P T+++LING C +LDEA + F L D + V+ +
Sbjct: 356 IDPDIFTYSSLINGFCMHDRLDEAKHM-------------FELMISKDCFPNVVTYNTLI 402
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLS 300
+ C+A + +L +++ G+V + TYN LI +AG+ + A K+FK + G+
Sbjct: 403 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 462
Query: 301 PDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSL 360
PD +TY L+DGL + + E A + +++ K EP Y ++ +C+ K+ + L
Sbjct: 463 PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 522
Query: 361 Y 361
+
Sbjct: 523 F 523
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/467 (23%), Positives = 216/467 (46%), Gaps = 16/467 (3%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R + FN LL+ K K + +SL ++ L Y+ LI+ F + +
Sbjct: 71 MVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQ 130
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
A ++ G+M+K G PD++ + +L G + R+ EAV + +M P+ +N
Sbjct: 131 LPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNT 190
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I G + A +L + D T+ ++ +CK+G + A + +MEK
Sbjct: 191 LIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGK 250
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKME-IGKSPSLFFRLAQGSDHVSDSVSLQKK 239
V + +I+ LC +++A LF +M+ G P++ V+
Sbjct: 251 IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNV--------------VTYNSL 296
Query: 240 VEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGL 299
+ +C G+ +A +LL+ + + + P++ T++ LI++F K G + A KL+ ++ + +
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356
Query: 300 SPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFS 359
PD TY +LI+G +R ++A + + M+ C P+ Y L+ C+ K++
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416
Query: 360 LYLEY-LKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFC 418
L+ E + L G ++ F G+ + A + ++ ++ YSILL G C
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 476
Query: 419 QAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIF 465
+ K+++AL++F L + + + + +I G+C + D +F
Sbjct: 477 KYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 523
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 177/395 (44%), Gaps = 16/395 (4%)
Query: 60 RYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYN 119
+ ++A L+G M++ LP ++ + +L ++ + + + M + D + YN
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 120 AIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKL 179
+I FC QL A ++ ++ D T + L+ C + EA + +QM +
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 180 GCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEI-GKSPSLFFRLAQGSDHVSDSVSLQK 238
P+ VTFN LI+GL K EA L +M G P LF +
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLF--------------TYGT 225
Query: 239 KVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKG 298
V +C+ G A LL ++ + D+ Y +I++ C N+N A LF ++ KG
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 285
Query: 299 LSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAF 358
+ P+ VTY +LI L R DA ++ M++ P+ + AL+ + K+ A
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 345
Query: 359 SLYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDF-NLAPYSILLIGF 417
LY E +K D + ++L F + + + EL F N+ Y+ L+ GF
Sbjct: 346 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 405
Query: 418 CQAKKVDEALIIFSVLDEFNININPTSCVHLISGL 452
C+AK+V+E + +F + + + N + LI GL
Sbjct: 406 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 104/233 (44%), Gaps = 36/233 (15%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
++ T+N L+ GFCK ++EE + L R + + G Y++LI G F+A + A ++
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 453
Query: 69 GRMIKGGILPDVILY-----------------------------------AIMLRGLSNE 93
+M+ G+ PD+I Y IM+ G+
Sbjct: 454 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKA 513
Query: 94 GRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTH 153
G+V + +F + +G+ P+ Y +I GFC G + A +L E+ L ++ T+
Sbjct: 514 GKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTY 573
Query: 154 TILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHL 206
LI + G + E+ +M G A T + +IN L G+L++++L
Sbjct: 574 NTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-HDGRLEKSYL 625
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 129/500 (25%), Positives = 227/500 (45%), Gaps = 53/500 (10%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSL- 67
++ TF L+NGFCK+G+++ A L +++E+ G L YS+LIDG+FKA H L
Sbjct: 285 NVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLF 344
Query: 68 ----------------------------------YGRMIKGGILPDVILYAIMLRGLSNE 93
Y RM+ GI P+V+ Y I+++GL +
Sbjct: 345 SQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQD 404
Query: 94 GRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTH 153
GR+ EA M+ ++++RG+ P Y+++I GFC G L +L+ ++ D +
Sbjct: 405 GRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIY 464
Query: 154 TILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEI 213
+L+ + K+G++ A +M + V FN+LI+G C+ + DEA +F M I
Sbjct: 465 GVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGI 524
Query: 214 -GKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYN 272
G P D + + G+ A L ++ G+ PD Y
Sbjct: 525 YGIKP--------------DVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYC 570
Query: 273 ILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKH 332
LI++FCK +LF +Q +S D +I L++ R EDA K +++++
Sbjct: 571 TLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEG 630
Query: 333 VCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLP-GRDNDSINALEEYFMK-GEVER 390
EP Y ++ C +++ A ++ E LK P G + ++ L K +++
Sbjct: 631 KMEPDIVTYNTMICGYCSLRRLDEAERIF-ELLKVTPFGPNTVTLTILIHVLCKNNDMDG 689
Query: 391 AIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLIS 450
AIR + + N Y L+ F ++ ++ + +F + E I+ + S +I
Sbjct: 690 AIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIID 749
Query: 451 GLCAKRNLYDAVVIFLYSLD 470
GLC + + +A IF ++D
Sbjct: 750 GLCKRGRVDEATNIFHQAID 769
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 188/380 (49%), Gaps = 19/380 (5%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSL-LRLLERDGRGIRLSG--YSSLIDGFFKARRYN 62
+ D+ + VL++G KQG + A+ +++L G+ IRL+ ++SLIDG+ + R++
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKML---GQSIRLNVVVFNSLIDGWCRLNRFD 513
Query: 63 EAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAII 122
EA ++ M GI PDV + ++R EGR+ EA+ +F M + GL PDA Y +I
Sbjct: 514 EALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLI 573
Query: 123 KGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCF 182
FC + L + + D ++I + K + +A + FN + +
Sbjct: 574 DAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKME 633
Query: 183 PSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEH 242
P VT+N +I G C +LDEA +F L + + ++V+L +
Sbjct: 634 PDIVTYNTMICGYCSLRRLDEAERIF-------------ELLKVTPFGPNTVTLTILIHV 680
Query: 243 MCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPD 302
+C+ A ++ + +A+ G P+ TY L++ F K+ ++ G+FKLF+++Q KG+SP
Sbjct: 681 LCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPS 740
Query: 303 SVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYL 362
V+Y +IDGL + R ++A I + P Y L+ C+ ++ A LY
Sbjct: 741 IVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYE 800
Query: 363 EYLKSLPGRDNDSINALEEY 382
L++ D+ AL EY
Sbjct: 801 HMLRNGVKPDDLLQRALSEY 820
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 118/471 (25%), Positives = 216/471 (45%), Gaps = 17/471 (3%)
Query: 4 RRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNE 63
R F+ + + N +L G ++E A LL L+ G + + +LI+GF K +
Sbjct: 246 RGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDR 304
Query: 64 AHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIK 123
A L+ M + GI PD+I Y+ ++ G G +G K+F++ + +G+ D +++ I
Sbjct: 305 AFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTID 364
Query: 124 GFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFP 183
+ G L A ++ + + T+TILI +C+ G + EA M+ Q+ K G P
Sbjct: 365 VYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEP 424
Query: 184 SAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEH 242
S VT+++LI+G CK G L L+ M ++G P D V V+
Sbjct: 425 SIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPP--------------DVVIYGVLVDG 470
Query: 243 MCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPD 302
+ + G L+A + ++ + ++ +N LI+ +C+ + A K+F+ + + G+ PD
Sbjct: 471 LSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPD 530
Query: 303 SVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYL 362
T+ T++ R E+A + M K EP Y L+ C+ K ++ L+
Sbjct: 531 VATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFD 590
Query: 363 EYLKSLPGRDNDSINALEEYFMK-GEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAK 421
++ D N + K +E A + L + ++ Y+ ++ G+C +
Sbjct: 591 LMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLR 650
Query: 422 KVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKG 472
++DEA IF +L N + LI LC ++ A+ +F +KG
Sbjct: 651 RLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKG 701
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 110/474 (23%), Positives = 203/474 (42%), Gaps = 55/474 (11%)
Query: 4 RRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNE 63
R D+ F L+ C+ G +++A+ + + G I +++ + R +
Sbjct: 142 RSLDADVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDL 199
Query: 64 AHSLYGRMIKGGILPD-VILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAII 122
+ ++ +GGI P V + +L L +G V +A+ +++RG N ++
Sbjct: 200 IADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVL 259
Query: 123 KGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCF 182
KG + Q++ A L +L C G
Sbjct: 260 KGL-SVDQIEVASRL--------------LSLVLDC---------------------GPA 283
Query: 183 PSAVTFNALINGLCKAGKLDEAHLLFYKMEI-GKSPSLFFRLAQGSDHVSDSVSLQKKVE 241
P+ VTF LING CK G++D A LF ME G P L ++ ++
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDL--------------IAYSTLID 329
Query: 242 HMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSP 301
+AG +KL +Q GV D+ ++ I+ + K+G++ A ++K + +G+SP
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389
Query: 302 DSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLY 361
+ VTY LI GL + R +AF + +LK EPS Y +L+ C+ + F+LY
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 362 LEYLKSLPGRDNDSINALEEYFMK-GEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQA 420
+ +K D L + K G + A+R +++ + N+ ++ L+ G+C+
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL 509
Query: 421 KKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFE 474
+ DEAL +F ++ + I + + ++ + L +A+ +F G E
Sbjct: 510 NRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLE 563
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 137/339 (40%), Gaps = 83/339 (24%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M + + D+ATF ++ +G+LEEA+ L + + G Y +LID F K +
Sbjct: 522 MGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMK 581
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
L+ M + I D+ + +++ L R+ +A K F +I+ + PD YN
Sbjct: 582 PTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNT 641
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFN------ 174
+I G+C + +LD A + + +T T TILI +CK + A MF+
Sbjct: 642 MICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKG 701
Query: 175 -----------------------------QMEKLGCFPSAVTFNALINGLCKAGKLDEAH 205
+M++ G PS V+++ +I+GLCK G++DEA
Sbjct: 702 SKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEAT 761
Query: 206 LLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVV 265
+F+ Q D+ ++
Sbjct: 762 NIFH------------------------------------------------QAIDAKLL 773
Query: 266 PDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSV 304
PD+ Y ILI +CK G + A L++ + G+ PD +
Sbjct: 774 PDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 812
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 87/187 (46%)
Query: 5 RFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEA 64
+ + D+ T+N ++ G+C +L+EA + LL+ G + LI K + A
Sbjct: 631 KMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGA 690
Query: 65 HSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKG 124
++ M + G P+ + Y ++ S + + K+F EM ++G+ P Y+ II G
Sbjct: 691 IRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDG 750
Query: 125 FCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPS 184
C G++D A ++ + L D + ILI CK G + EA ++ M + G P
Sbjct: 751 LCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Query: 185 AVTFNAL 191
+ AL
Sbjct: 811 DLLQRAL 817
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 129/506 (25%), Positives = 223/506 (44%), Gaps = 52/506 (10%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
++ ++ T + LLNG+C ++ EAV+L+ + G +++LI G F + +EA
Sbjct: 147 YEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAM 206
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
+L RM+ G PD++ Y +++ GL G A + +M Q L P YN II G
Sbjct: 207 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 266
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
C +D A +L E+ + T++ LI +C G +A + + M + P
Sbjct: 267 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKMEIGKS--PSLFFRLAQGSDHVSDSVSLQKKVEHM 243
TF+ALI+ K GKL EA L+ +M + +S PS+ V+ +
Sbjct: 327 FTFSALIDAFVKEGKLVEAEKLYDEM-VKRSIDPSI--------------VTYSSLINGF 371
Query: 244 CEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDS 303
C + A ++ + PD+ TYN LI FCK + ++F+++ +GL ++
Sbjct: 372 CMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 431
Query: 304 VTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLE 363
VTY LI GL++ + A +I M+ P+ Y L+ LC+ K+ A ++
Sbjct: 432 VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF-- 489
Query: 364 YLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKV 423
EY + ++E I Y+I++ G C+A KV
Sbjct: 490 -----------------EYLQRSKMEPTIY---------------TYNIMIEGMCKAGKV 517
Query: 424 DEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKEL 483
++ +F L + + + +ISG C K + +A +F + G L
Sbjct: 518 EDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTL 577
Query: 484 LECLLVSQDKRKYAIDLIGRMKSRGY 509
+ L D R+ + +LI M+S G+
Sbjct: 578 IRARLRDGD-REASAELIKEMRSCGF 602
Score = 168 bits (426), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 171/342 (50%), Gaps = 15/342 (4%)
Query: 5 RFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEA 64
+ + + +N +++G CK +++A++L + +E G + YSSLI R+++A
Sbjct: 251 KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDA 310
Query: 65 HSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKG 124
L MI+ I PDV ++ ++ EG++ EA K++ EM++R + P Y+++I G
Sbjct: 311 SRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLING 370
Query: 125 FCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPS 184
FC +LD A+ + + D T+ LI CK V E E+F +M + G +
Sbjct: 371 FCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 430
Query: 185 AVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSV-SLQKKVEHM 243
VT+N LI GL +AG D A +F +M SD V ++ + ++ +
Sbjct: 431 TVTYNILIQGLFQAGDCDMAQEIFKEMV--------------SDGVPPNIMTYNTLLDGL 476
Query: 244 CEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDS 303
C+ G+ A + L S + P I TYNI+I CKAG + + LF +L LKG+ PD
Sbjct: 477 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 536
Query: 304 VTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALM 345
V Y T+I G R +E+A + M + P+ Y L+
Sbjct: 537 VAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 156/315 (49%), Gaps = 15/315 (4%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R+ D+ TF+ L++ F K+GKL EA L + + + YSSLI+GF R
Sbjct: 317 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 376
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+EA ++ M+ PDV+ Y +++G RV E +++F EM QRGL+ + YN
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I+G G D A+ + E+ + T+ L+ +CK G + +A +F +++
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEI-GKSPSLFFRLAQGSDHVSDSVSLQKK 239
P+ T+N +I G+CKAGK+++ LF + + G P D V+
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKP--------------DVVAYNTM 542
Query: 240 VEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGL 299
+ C G A L ++ + G +P+ YN LI + + G+ + +L K+++ G
Sbjct: 543 ISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGF 602
Query: 300 SPDSVTYGTLIDGLY 314
+ D+ T G + + L+
Sbjct: 603 AGDASTIGLVTNMLH 617
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/447 (25%), Positives = 193/447 (43%), Gaps = 55/447 (12%)
Query: 60 RYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYN 119
+ ++A +L+G M+K P +I ++ +L ++ + + + +M G+ + + Y+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 120 AIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKL 179
+I FC QL A ++ ++ + T + L+ C + EA + +QM
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 180 GCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKK 239
G P+ VTFN LI+GL K EA L +M +A+G D V+
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRM-----------VAKGCQ--PDLVTYGVV 227
Query: 240 VEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGL 299
V +C+ G T A+ LL ++ + P + YN +I+ CK +M+ A LFK+++ KG+
Sbjct: 228 VNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI 287
Query: 300 SPDSVTYGTLIDGLYRVEREEDAF-----------------------------------K 324
P+ VTY +LI L R DA K
Sbjct: 288 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK 347
Query: 325 IRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKS---LPGRDNDSINALEE 381
+ D M+K +PS Y +L+ C ++ A ++ E++ S P D + N L +
Sbjct: 348 LYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF-EFMVSKHCFP--DVVTYNTLIK 404
Query: 382 YFMK-GEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNINI 440
F K VE + E+ R N Y+IL+ G QA D A IF + +
Sbjct: 405 GFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPP 464
Query: 441 NPTSCVHLISGLCAKRNLYDAVVIFLY 467
N + L+ GLC L A+V+F Y
Sbjct: 465 NIMTYNTLLDGLCKNGKLEKAMVVFEY 491
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 181/378 (47%), Gaps = 15/378 (3%)
Query: 89 GLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLH 148
GLS E ++ +AV +F EM++ P ++ ++ + + D SL ++ H
Sbjct: 56 GLS-ELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPH 114
Query: 149 DTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLF 208
+ T++ILI C++ + A + +M KLG P+ VT ++L+NG C + ++ EA L
Sbjct: 115 NHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALV 174
Query: 209 YKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDI 268
+M + + + ++V+ + + + A L+ ++ G PD+
Sbjct: 175 DQMFV-------------TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDL 221
Query: 269 KTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDH 328
TY +++N CK G+ + AF L ++ L P + Y T+IDGL + + +DA +
Sbjct: 222 VTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE 281
Query: 329 MLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMK-GE 387
M P+ Y +L++ LC + S A L + ++ D + +AL + F+K G+
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Query: 388 VERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVH 447
+ A + E+ R D ++ YS L+ GFC ++DEA +F + + + +
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 401
Query: 448 LISGLCAKRNLYDAVVIF 465
LI G C + + + + +F
Sbjct: 402 LIKGFCKYKRVEEGMEVF 419
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 99/233 (42%), Gaps = 36/233 (15%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D+ T+N L+ GFCK ++EE + + R + + G Y+ LI G F+A + A ++
Sbjct: 395 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 454
Query: 69 GRMIKGGILPDVILYA-----------------------------------IMLRGLSNE 93
M+ G+ P+++ Y IM+ G+
Sbjct: 455 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 514
Query: 94 GRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTH 153
G+V + +F + +G+ PD YN +I GFC G + A +L E+ L ++ +
Sbjct: 515 GKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCY 574
Query: 154 TILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHL 206
LI + G + E+ +M G A T L+ + G+LD++ L
Sbjct: 575 NTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNMLHDGRLDKSFL 626
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 139/560 (24%), Positives = 248/560 (44%), Gaps = 125/560 (22%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
++ TFNVL+NG+C +GKLE+A+ +L
Sbjct: 203 NVQTFNVLVNGYCLEGKLEDALGMLE---------------------------------- 228
Query: 69 GRMIKG-GILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCD 127
RM+ + PD + Y +L+ +S +GR+ + ++ +M + GL+P+ YN ++ G+C
Sbjct: 229 -RMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCK 287
Query: 128 IGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVT 187
+G L A + + + L D CT+ ILI +C G +RE E+ + M+ L P VT
Sbjct: 288 LGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVT 347
Query: 188 FNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAG 247
+N LI+G + G EA L +ME ++ V+ ++SL+ +C+
Sbjct: 348 YNTLIDGCFELGLSLEARKLMEQMEND---------GVKANQVTHNISLK----WLCKEE 394
Query: 248 QTLNAYKLLTQLAD-SGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLS------ 300
+ + + +L D G PDI TY+ LI ++ K G+++GA ++ +++ KG+
Sbjct: 395 KREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITL 454
Query: 301 -----------------------------PDSVTYGTLIDGLYRVEREEDAFKIRDHMLK 331
D VTYGTLI G +R E+ E A ++ D M K
Sbjct: 455 NTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKK 514
Query: 332 HVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEVERA 391
P+ + + +L+ LC K LA + E +S
Sbjct: 515 VKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAES------------------------ 550
Query: 392 IRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISG 451
GLL D F +++G+C+ +V++A ++ + + + +C L++G
Sbjct: 551 --GLLPDDSTFNS--------IILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNG 600
Query: 452 LCAKRNLYDAVVIFLYSLDKGFELGPKICKELLECLLVSQDKR-KYAIDLIGRMKSRGYR 510
LC K + + + F +L + E+ ++ +DK+ K A DL+ M+ +G
Sbjct: 601 LC-KEGMTEKALNFFNTLIEEREVDTVTYNTMISAF--CKDKKLKEAYDLLSEMEEKGLE 657
Query: 511 LHKYQYRQTISLLQQLQEGK 530
++ Y ISLL +++GK
Sbjct: 658 PDRFTYNSFISLL--MEDGK 675
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 140/290 (48%), Gaps = 14/290 (4%)
Query: 3 MRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYN 62
M F D+ T++ L+ + K G L A+ ++R + + G + ++++D K R+ +
Sbjct: 409 MHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLD 468
Query: 63 EAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAII 122
EAH+L K G + D + Y ++ G E +V +A++M+ EM + + P +N++I
Sbjct: 469 EAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLI 528
Query: 123 KGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCF 182
G C G+ + A E++ L D T +I CK+G V +A E +N+ K
Sbjct: 529 GGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFK 588
Query: 183 PSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEH 242
P T N L+NGLCK G + E L F+ I + D+V+ +
Sbjct: 589 PDNYTCNILLNGLCKEG-MTEKALNFFNTLI-------------EEREVDTVTYNTMISA 634
Query: 243 MCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFK 292
C+ + AY LL+++ + G+ PD TYN I+ + G ++ +L K
Sbjct: 635 FCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLK 684
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 165/383 (43%), Gaps = 50/383 (13%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
DL T+N+L+NG C G + E + L+ ++ + Y++LIDG F+ EA L
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368
Query: 69 GRMIKGGI------------------------------------LPDVILYAIMLRGLSN 92
+M G+ PD++ Y +++
Sbjct: 369 EQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLK 428
Query: 93 EGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCT 152
G + A++M EM Q+G+ + N I+ C +LD A +L + D T
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVT 488
Query: 153 HTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKME 212
+ LI ++ V +A EM+++M+K+ P+ TFN+LI GLC GK + A ME
Sbjct: 489 YGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELA------ME 542
Query: 213 IGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYN 272
F LA+ S + D + + C+ G+ A++ + PD T N
Sbjct: 543 K------FDELAE-SGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCN 595
Query: 273 ILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKH 332
IL+N CK G A F L ++ D+VTY T+I + ++ ++A+ + M +
Sbjct: 596 ILLNGLCKEGMTEKALNFFNTL-IEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEK 654
Query: 333 VCEPSFAVYKALMTWLCRGKKIS 355
EP Y + ++ L K+S
Sbjct: 655 GLEPDRFTYNSFISLLMEDGKLS 677
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 113/213 (53%), Gaps = 3/213 (1%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M + + + T N +L+ CK+ KL+EA +LL + G + Y +LI GFF+ +
Sbjct: 442 MGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEK 501
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+A ++ M K I P V + ++ GL + G+ A++ F E+ + GLLPD +N+
Sbjct: 502 VEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNS 561
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQM-EKL 179
II G+C G+++ A + E H D T IL+ +CK+GM +A FN + E+
Sbjct: 562 IILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER 621
Query: 180 GCFPSAVTFNALINGLCKAGKLDEAHLLFYKME 212
VT+N +I+ CK KL EA+ L +ME
Sbjct: 622 EV--DTVTYNTMISAFCKDKKLKEAYDLLSEME 652
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 96/230 (41%), Gaps = 28/230 (12%)
Query: 1 MW--MRRFQ--RDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFF 56
MW M++ + ++TFN L+ G C GK E A+ L G S ++S+I G+
Sbjct: 508 MWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYC 567
Query: 57 KARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAH 116
K R +A Y IK PD I+L GL EG +A+ F +I+ + D
Sbjct: 568 KEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV-DTV 626
Query: 117 CYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQM 176
YN +I FC +L A L E+ D T+ I + + G + E E+ +
Sbjct: 627 TYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKF 686
Query: 177 E-KLGCF-----------PS-----------AVTFNALINGLCKAGKLDE 203
K G P+ A+ ++ +I+ LC G+L E
Sbjct: 687 SGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLKE 736
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/479 (26%), Positives = 213/479 (44%), Gaps = 62/479 (12%)
Query: 12 TFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSG--YSSLIDGFFKARRYN------- 62
T++VL++G CK +LE+A SLL +E D G+ L YS LIDG K R +
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLL--VEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVH 336
Query: 63 ----------------------------EAHSLYGRMIKGGILPDVILYAIMLRGLSNEG 94
+A +L+ MI G++P YA ++ G E
Sbjct: 337 EMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREK 396
Query: 95 RVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHT 154
V + ++ EM +R ++ + Y ++KG C G LD A ++ E+ + +T
Sbjct: 397 NVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYT 456
Query: 155 ILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EI 213
LI + +A + +M++ G P +N+LI GL KA ++DEA +M E
Sbjct: 457 TLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVEN 516
Query: 214 GKSPSLFFRLA--QGSDHVSDSVSLQKKVEHM-------------------CEAGQTLNA 252
G P+ F A G S+ S K V+ M C+ G+ + A
Sbjct: 517 GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEA 576
Query: 253 YKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDG 312
+ D G++ D KTY +L+N K ++ A ++F++++ KG++PD +YG LI+G
Sbjct: 577 CSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLING 636
Query: 313 LYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEY-LKSLPGR 371
++ + A I D M++ P+ +Y L+ CR +I A L E +K L
Sbjct: 637 FSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPN 696
Query: 372 DNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIF 430
++ Y G++ A R E+ + + Y+ L+ G C+ V+ A+ IF
Sbjct: 697 AVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 136/498 (27%), Positives = 231/498 (46%), Gaps = 48/498 (9%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
++ + L+ F + + +A+ +L+ ++ G + Y+SLI G KA+R +EA S
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
M++ G+ P+ Y + G A K EM + G+LP+ +I +C
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKK 570
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
G++ A S + + L D T+T+L+ + K V +A+E+F +M G P ++
Sbjct: 571 GKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSY 630
Query: 189 NALINGLCKAGKLDEAHLLFYKM-EIGKSPS-LFFRLAQGSDHVSDSVSLQKKVEHMCEA 246
LING K G + +A +F +M E G +P+ + + + G C +
Sbjct: 631 GVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGG---------------FCRS 675
Query: 247 GQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTY 306
G+ A +LL +++ G+ P+ TY +I+ +CK+G++ AF+LF +++LKGL PDS Y
Sbjct: 676 GEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVY 735
Query: 307 GTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLK 366
TL+DG R+ E A I K C S A + AL+ W+ + K L E L
Sbjct: 736 TTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELK----TEVLN 790
Query: 367 SLP-------GRDND-SINALEEYFMKGEVERAIRGLLELDFRFRDFNLAP----YSILL 414
L G+ ND + N + +Y K E + EL + ++ NL P Y+ LL
Sbjct: 791 RLMDGSFDRFGKPNDVTYNIMIDYLCK---EGNLEAAKELFHQMQNANLMPTVITYTSLL 847
Query: 415 IGFCQAKKVDEALIIFSVLDE-FNININPTSCVH-------LISGLCAKRNLYDAVVIFL 466
G+ + + E +F V DE I P ++ L G+ K + +
Sbjct: 848 NGYDKMGRRAE---MFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAK 904
Query: 467 YSLDKGFELGPKICKELL 484
++D G +L C+ LL
Sbjct: 905 NAVDDGCKLSISTCRALL 922
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 134/569 (23%), Positives = 240/569 (42%), Gaps = 79/569 (13%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D F +L +G+ +G +EEAV + RLS L+D + R + +Y
Sbjct: 150 DGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVY 209
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRV---------------------GEAVKMFAEMI 107
M++ ++ DV Y +++ G V A+K+ MI
Sbjct: 210 KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMI 269
Query: 108 QRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVE-------ISGH------DGL------- 147
+GL+P + Y+ +I G C I +L+ A+SL VE + H DGL
Sbjct: 270 CKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNAD 329
Query: 148 ------HDTCTHTI---------LICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALI 192
H+ +H I IC M K+G++ +A+ +F+ M G P A + +LI
Sbjct: 330 AAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLI 389
Query: 193 NGLCKAGKLDEAHLLFYKME---IGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQT 249
G C+ + + + L +M+ I SP + + +G MC +G
Sbjct: 390 EGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKG----------------MCSSGDL 433
Query: 250 LNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTL 309
AY ++ ++ SG P++ Y LI +F + A ++ K+++ +G++PD Y +L
Sbjct: 434 DGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSL 493
Query: 310 IDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLP 369
I GL + +R ++A M+++ +P+ Y A ++ + + A Y++ ++
Sbjct: 494 IIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASA-DKYVKEMRECG 552
Query: 370 GRDNDSI--NALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEAL 427
N + + EY KG+V A + + + Y++L+ G + KVD+A
Sbjct: 553 VLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAE 612
Query: 428 IIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKELLECL 487
IF + I + S LI+G N+ A IF +++G I LL
Sbjct: 613 EIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGF 672
Query: 488 LVSQDKRKYAIDLIGRMKSRGYRLHKYQY 516
S + K A +L+ M +G + Y
Sbjct: 673 CRSGEIEK-AKELLDEMSVKGLHPNAVTY 700
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 153/347 (44%), Gaps = 58/347 (16%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D+ ++ VL+NGF K G +++A S+ + +G + Y+ L+ GF ++ +A L
Sbjct: 626 DVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELL 685
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
M G+ P+ + Y ++ G G + EA ++F EM +GL+PD+ Y ++ G C +
Sbjct: 686 DEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRL 745
Query: 129 GQLDHA------------------------------RSLHVEISGH--DGLHD------T 150
++ A L E+ DG D
Sbjct: 746 NDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPND 805
Query: 151 CTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYK 210
T+ I+I +CK+G + A+E+F+QM+ P+ +T+ +L+NG K G+ E +F +
Sbjct: 806 VTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDE 865
Query: 211 -MEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQL-----ADSGV 264
+ G P DH+ SV + ++ G T A L+ Q+ D G
Sbjct: 866 AIAAGIEP----------DHIMYSVIINAFLKE----GMTTKALVLVDQMFAKNAVDDGC 911
Query: 265 VPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLID 311
I T L++ F K G M A K+ +++ PDS T LI+
Sbjct: 912 KLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELIN 958
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 84/196 (42%), Gaps = 11/196 (5%)
Query: 11 ATFNVLLNGFCKQGKLEEAVSLLRLL-----ERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
A FN L+N K GK E +L L +R G+ ++ Y+ +ID K A
Sbjct: 767 APFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVT-YNIMIDYLCKEGNLEAAK 825
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
L+ +M ++P VI Y +L G GR E +F E I G+ PD Y+ II F
Sbjct: 826 ELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAF 885
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICE-----MCKKGMVREAQEMFNQMEKLG 180
G A L ++ + + D C +I C K G + A+++ M +L
Sbjct: 886 LKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQ 945
Query: 181 CFPSAVTFNALINGLC 196
P + T LIN C
Sbjct: 946 YIPDSATVIELINESC 961
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 136/531 (25%), Positives = 226/531 (42%), Gaps = 98/531 (18%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D+ F +N FCK GK+EEAV L +E G + ++++IDG RY+EA
Sbjct: 259 DVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK 318
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPD-------------- 114
+M++ G+ P +I Y+I+++GL+ R+G+A + EM ++G P+
Sbjct: 319 EKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 378
Query: 115 ---------------------AHCYNAIIKGFCDIGQLDHARSLHVEI-----SGHDGLH 148
+ YN +IKG+C GQ D+A L E+ + + G
Sbjct: 379 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 438
Query: 149 DT-----CTH-------------------------TILICEMCKKGMVREAQEMFNQMEK 178
+ C+H T LI +CK G +A E++ Q
Sbjct: 439 TSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLN 498
Query: 179 LGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQ---GSDHVSDSVS 235
G T NAL++GLC+AGKLDEA FR+ + G V D VS
Sbjct: 499 KGFVVDTRTSNALLHGLCEAGKLDEA----------------FRIQKEILGRGCVMDRVS 542
Query: 236 LQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQ 295
+ C + A+ L ++ G+ PD TY+ILI + A + + D +
Sbjct: 543 YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK 602
Query: 296 LKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKIS 355
G+ PD TY +IDG + ER E+ + D M+ +P+ VY L+ CR ++S
Sbjct: 603 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 662
Query: 356 LAFSLYLEYLKSLPGRDNDSINALEEYFMKG-----EVERAIRGLLELDFRFRDFNLAPY 410
+A LE + + + +A +KG VE A E+ + N+ Y
Sbjct: 663 MA----LELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHY 718
Query: 411 SILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDA 461
+ L+ G+ + ++ + + + N++ N + +I G N+ +A
Sbjct: 719 TALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEA 769
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 164/326 (50%), Gaps = 19/326 (5%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLS--GYSSLIDGFFKARRYNE 63
F D T N LL+G C+ GKL+EA + + E GRG + Y++LI G ++ +E
Sbjct: 501 FVVDTRTSNALLHGLCEAGKLDEAFRIQK--EILGRGCVMDRVSYNTLISGCCGKKKLDE 558
Query: 64 AHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIK 123
A M+K G+ PD Y+I++ GL N +V EA++ + + + G+LPD + Y+ +I
Sbjct: 559 AFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMID 618
Query: 124 GFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFP 183
G C + + + E+ + +T + LI C+ G + A E+ M+ G P
Sbjct: 619 GCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISP 678
Query: 184 SAVTFNALINGLCKAGKLDEAHLLFYKMEI-GKSPSLFFRLAQGSDHVSDSVSLQKKVEH 242
++ T+ +LI G+ +++EA LLF +M + G P++F A ++
Sbjct: 679 NSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL--------------IDG 724
Query: 243 MCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPD 302
+ GQ + LL ++ V P+ TY ++I + + GN+ A +L +++ KG+ PD
Sbjct: 725 YGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPD 784
Query: 303 SVTYGTLIDGLYRVEREEDAFKIRDH 328
S+TY I G + +AFK D
Sbjct: 785 SITYKEFIYGYLKQGGVLEAFKGSDE 810
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 107/467 (22%), Positives = 202/467 (43%), Gaps = 29/467 (6%)
Query: 14 NVLLNGFCKQGKLEE---AVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGR 70
++L+ +C Q K + A+ + +L G + + L+ +A + + +
Sbjct: 192 DLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDV 251
Query: 71 MIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQ 130
+ KG + PDV L+ + G+V EAVK+F++M + G+ P+ +N +I G G+
Sbjct: 252 VCKG-VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR 310
Query: 131 LDHARSLHVEISGHDGLHDT-CTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFN 189
D A + E G+ T T++IL+ + + + +A + +M K G P+ + +N
Sbjct: 311 YDEA-FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYN 369
Query: 190 ALINGLCKAGKLDEA---HLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEA 246
LI+ +AG L++A L + + S + L +G + + ++ ++ M
Sbjct: 370 NLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI 429
Query: 247 GQTLN-------------------AYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGA 287
G +N A + + ++ + P LI+ CK G + A
Sbjct: 430 GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 489
Query: 288 FKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTW 347
+L+ KG D+ T L+ GL + ++AF+I+ +L C Y L++
Sbjct: 490 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 549
Query: 348 LCRGKKISLAFSLYLEYLKSLPGRDNDSINALE-EYFMKGEVERAIRGLLELDFRFRDFN 406
C KK+ AF E +K DN + + L F +VE AI+ + +
Sbjct: 550 CCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPD 609
Query: 407 LAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLC 453
+ YS+++ G C+A++ +E F + N+ N HLI C
Sbjct: 610 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYC 656
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 121/256 (47%), Gaps = 17/256 (6%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R + D T+++L+ G K+EEA+ +R+G + YS +IDG KA R
Sbjct: 566 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER 625
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
E + M+ + P+ ++Y ++R GR+ A+++ +M +G+ P++ Y +
Sbjct: 626 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 685
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTH-TILICEMCKKGMVREAQEMFNQMEKL 179
+IKG I +++ A+ L E+ +GL H T LI K G + + + + +M
Sbjct: 686 LIKGMSIISRVEEAKLLFEEMR-MEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK 744
Query: 180 GCFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQK 238
P+ +T+ +I G + G + EA L +M E G P DS++ ++
Sbjct: 745 NVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVP--------------DSITYKE 790
Query: 239 KVEHMCEAGQTLNAYK 254
+ + G L A+K
Sbjct: 791 FIYGYLKQGGVLEAFK 806
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 102/205 (49%), Gaps = 2/205 (0%)
Query: 263 GVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDA 322
GV PD+ + IN+FCK G + A KLF ++ G++P+ VT+ T+IDGL R ++A
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 323 FKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYL-KSLPGRDNDSINALEE 381
F ++ M++ EP+ Y L+ L R K+I A+ + E K P N ++
Sbjct: 315 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS 374
Query: 382 YFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININ 441
+ G + +AI + + + Y+ L+ G+C+ + D A + + N+N
Sbjct: 375 FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN 434
Query: 442 PTSCVHLISGLCAKRNLYDAVVIFL 466
S +I LC+ ++D+ + F+
Sbjct: 435 QGSFTSVICLLCSHL-MFDSALRFV 458
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 136/531 (25%), Positives = 226/531 (42%), Gaps = 98/531 (18%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D+ F +N FCK GK+EEAV L +E G + ++++IDG RY+EA
Sbjct: 259 DVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK 318
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPD-------------- 114
+M++ G+ P +I Y+I+++GL+ R+G+A + EM ++G P+
Sbjct: 319 EKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 378
Query: 115 ---------------------AHCYNAIIKGFCDIGQLDHARSLHVEI-----SGHDGLH 148
+ YN +IKG+C GQ D+A L E+ + + G
Sbjct: 379 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 438
Query: 149 DT-----CTH-------------------------TILICEMCKKGMVREAQEMFNQMEK 178
+ C+H T LI +CK G +A E++ Q
Sbjct: 439 TSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLN 498
Query: 179 LGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQ---GSDHVSDSVS 235
G T NAL++GLC+AGKLDEA FR+ + G V D VS
Sbjct: 499 KGFVVDTRTSNALLHGLCEAGKLDEA----------------FRIQKEILGRGCVMDRVS 542
Query: 236 LQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQ 295
+ C + A+ L ++ G+ PD TY+ILI + A + + D +
Sbjct: 543 YNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCK 602
Query: 296 LKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKIS 355
G+ PD TY +IDG + ER E+ + D M+ +P+ VY L+ CR ++S
Sbjct: 603 RNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 662
Query: 356 LAFSLYLEYLKSLPGRDNDSINALEEYFMKG-----EVERAIRGLLELDFRFRDFNLAPY 410
+A LE + + + +A +KG VE A E+ + N+ Y
Sbjct: 663 MA----LELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHY 718
Query: 411 SILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDA 461
+ L+ G+ + ++ + + + N++ N + +I G N+ +A
Sbjct: 719 TALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEA 769
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 164/326 (50%), Gaps = 19/326 (5%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLS--GYSSLIDGFFKARRYNE 63
F D T N LL+G C+ GKL+EA + + E GRG + Y++LI G ++ +E
Sbjct: 501 FVVDTRTSNALLHGLCEAGKLDEAFRIQK--EILGRGCVMDRVSYNTLISGCCGKKKLDE 558
Query: 64 AHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIK 123
A M+K G+ PD Y+I++ GL N +V EA++ + + + G+LPD + Y+ +I
Sbjct: 559 AFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMID 618
Query: 124 GFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFP 183
G C + + + E+ + +T + LI C+ G + A E+ M+ G P
Sbjct: 619 GCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISP 678
Query: 184 SAVTFNALINGLCKAGKLDEAHLLFYKMEI-GKSPSLFFRLAQGSDHVSDSVSLQKKVEH 242
++ T+ +LI G+ +++EA LLF +M + G P++F A ++
Sbjct: 679 NSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL--------------IDG 724
Query: 243 MCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPD 302
+ GQ + LL ++ V P+ TY ++I + + GN+ A +L +++ KG+ PD
Sbjct: 725 YGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPD 784
Query: 303 SVTYGTLIDGLYRVEREEDAFKIRDH 328
S+TY I G + +AFK D
Sbjct: 785 SITYKEFIYGYLKQGGVLEAFKGSDE 810
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 107/467 (22%), Positives = 202/467 (43%), Gaps = 29/467 (6%)
Query: 14 NVLLNGFCKQGKLEE---AVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGR 70
++L+ +C Q K + A+ + +L G + + L+ +A + + +
Sbjct: 192 DLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDV 251
Query: 71 MIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQ 130
+ KG + PDV L+ + G+V EAVK+F++M + G+ P+ +N +I G G+
Sbjct: 252 VCKG-VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR 310
Query: 131 LDHARSLHVEISGHDGLHDT-CTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFN 189
D A + E G+ T T++IL+ + + + +A + +M K G P+ + +N
Sbjct: 311 YDEA-FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYN 369
Query: 190 ALINGLCKAGKLDEA---HLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEA 246
LI+ +AG L++A L + + S + L +G + + ++ ++ M
Sbjct: 370 NLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI 429
Query: 247 GQTLN-------------------AYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGA 287
G +N A + + ++ + P LI+ CK G + A
Sbjct: 430 GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 489
Query: 288 FKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTW 347
+L+ KG D+ T L+ GL + ++AF+I+ +L C Y L++
Sbjct: 490 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 549
Query: 348 LCRGKKISLAFSLYLEYLKSLPGRDNDSINALE-EYFMKGEVERAIRGLLELDFRFRDFN 406
C KK+ AF E +K DN + + L F +VE AI+ + +
Sbjct: 550 CCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPD 609
Query: 407 LAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLC 453
+ YS+++ G C+A++ +E F + N+ N HLI C
Sbjct: 610 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYC 656
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 121/256 (47%), Gaps = 17/256 (6%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R + D T+++L+ G K+EEA+ +R+G + YS +IDG KA R
Sbjct: 566 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER 625
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
E + M+ + P+ ++Y ++R GR+ A+++ +M +G+ P++ Y +
Sbjct: 626 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 685
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTH-TILICEMCKKGMVREAQEMFNQMEKL 179
+IKG I +++ A+ L E+ +GL H T LI K G + + + + +M
Sbjct: 686 LIKGMSIISRVEEAKLLFEEMR-MEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK 744
Query: 180 GCFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQK 238
P+ +T+ +I G + G + EA L +M E G P DS++ ++
Sbjct: 745 NVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVP--------------DSITYKE 790
Query: 239 KVEHMCEAGQTLNAYK 254
+ + G L A+K
Sbjct: 791 FIYGYLKQGGVLEAFK 806
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 102/205 (49%), Gaps = 2/205 (0%)
Query: 263 GVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDA 322
GV PD+ + IN+FCK G + A KLF ++ G++P+ VT+ T+IDGL R ++A
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 323 FKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYL-KSLPGRDNDSINALEE 381
F ++ M++ EP+ Y L+ L R K+I A+ + E K P N ++
Sbjct: 315 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS 374
Query: 382 YFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININ 441
+ G + +AI + + + Y+ L+ G+C+ + D A + + N+N
Sbjct: 375 FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN 434
Query: 442 PTSCVHLISGLCAKRNLYDAVVIFL 466
S +I LC+ ++D+ + F+
Sbjct: 435 QGSFTSVICLLCSHL-MFDSALRFV 458
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 125/476 (26%), Positives = 219/476 (46%), Gaps = 56/476 (11%)
Query: 3 MRRFQ--RDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M+RF+ + N LL+ F K GK ++ + + G + Y+ +ID K
Sbjct: 218 MKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGD 277
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
A L+ M G++PD + Y M+ G GR+ + V F EM PD YNA
Sbjct: 278 VEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNA 337
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I FC G+L + E+ G+ + +++ L+ CK+GM+++A + + M ++G
Sbjct: 338 LINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVG 397
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVS---DSVSLQ 237
P+ T+ +LI+ CK G L +A FRL V + V+
Sbjct: 398 LVPNEYTYTSLIDANCKIGNLSDA----------------FRLGNEMLQVGVEWNVVTYT 441
Query: 238 KKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLK 297
++ +C+A + A +L ++ +GV+P++ +YN LI+ F KA NM+ A +L +L+ +
Sbjct: 442 ALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGR 501
Query: 298 GLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLA 357
G+ PD + YGT I GL +E+ E A + + M + + + +Y LM
Sbjct: 502 GIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMD----------- 550
Query: 358 FSLYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGF 417
Y KS G + ++ L+E + ELD + + + +L+ G
Sbjct: 551 -----AYFKS--GNPTEGLHLLDE-------------MKELDI---EVTVVTFCVLIDGL 587
Query: 418 CQAKKVDEALIIFS-VLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKG 472
C+ K V +A+ F+ + ++F + N +I GLC + A +F + KG
Sbjct: 588 CKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKG 643
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 201/425 (47%), Gaps = 35/425 (8%)
Query: 36 LERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMI---------------KGGILPDV 80
+ R+G + Y + F AR Y +A+S+ M+ + +P
Sbjct: 133 MTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGF 192
Query: 81 ILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVE 140
++ + L + G + EA++ F++M + + P N ++ F +G+ D + +
Sbjct: 193 GVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKD 252
Query: 141 ISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGK 200
+ G T+ I+I MCK+G V A+ +F +M+ G P VT+N++I+G K G+
Sbjct: 253 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 312
Query: 201 LDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQL 259
LD+ F +M ++ P D ++ + C+ G+ + ++
Sbjct: 313 LDDTVCFFEEMKDMCCEP--------------DVITYNALINCFCKFGKLPIGLEFYREM 358
Query: 260 ADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVERE 319
+G+ P++ +Y+ L+++FCK G M A K + D++ GL P+ TY +LID ++
Sbjct: 359 KGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNL 418
Query: 320 EDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLY--LEYLKSLPGRDNDSIN 377
DAF++ + ML+ E + Y AL+ LC +++ A L+ ++ +P S N
Sbjct: 419 SDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNL--ASYN 476
Query: 378 ALEEYFMKGE-VERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEF 436
AL F+K + ++RA+ L EL R +L Y + G C +K++ A ++ + + E
Sbjct: 477 ALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKEC 536
Query: 437 NININ 441
I N
Sbjct: 537 GIKAN 541
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/436 (24%), Positives = 205/436 (47%), Gaps = 31/436 (7%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R D T+N +++GF K G+L++ V ++ + Y++LI+ F K +
Sbjct: 288 MKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGK 347
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
Y M G+ P+V+ Y+ ++ EG + +A+K + +M + GL+P+ + Y +
Sbjct: 348 LPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTS 407
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I C IG L A L E+ + T+T LI +C ++EA+E+F +M+ G
Sbjct: 408 LIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAG 467
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKME-IGKSPSLFFRLAQGSDHVSDSVSLQKK 239
P+ ++NALI+G KA +D A L +++ G P L L G+
Sbjct: 468 VIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDL---LLYGT-----------F 513
Query: 240 VEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGL 299
+ +C + A ++ ++ + G+ + Y L++++ K+GN L +++ +
Sbjct: 514 IWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDI 573
Query: 300 SPDSVTYGTLIDGLYR---VEREEDAFK--IRDHMLKHVCEPSFAVYKALMTWLCRGKKI 354
VT+ LIDGL + V + D F D L + + A++ A++ LC+ ++
Sbjct: 574 EVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGL----QANAAIFTAMIDGLCKDNQV 629
Query: 355 SLAFSLYLEYLKSLPGRDNDSINALEE-YFMKGEVERAIR---GLLELDFRFRDFNLAPY 410
A +L+ + ++ D + +L + F +G V A+ + E+ + +L Y
Sbjct: 630 EAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMK---LDLLAY 686
Query: 411 SILLIGFCQAKKVDEA 426
+ L+ G ++ +A
Sbjct: 687 TSLVWGLSHCNQLQKA 702
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/411 (23%), Positives = 188/411 (45%), Gaps = 24/411 (5%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
+ D+ T+N L+N FCK GKL + R ++ +G + YS+L+D F K +A
Sbjct: 329 EPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIK 388
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
Y M + G++P+ Y ++ G + +A ++ EM+Q G+ + Y A+I G C
Sbjct: 389 FYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLC 448
Query: 127 DIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAV 186
D ++ A L ++ + + ++ LI K + A E+ N+++ G P +
Sbjct: 449 DAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLL 508
Query: 187 TFNALINGLCKAGKLDEAHLLFYKM-EIG-KSPSL--------FFRLAQGSD--HVSD-- 232
+ I GLC K++ A ++ +M E G K+ SL +F+ ++ H+ D
Sbjct: 509 LYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 568
Query: 233 -SVSLQKKVEHMCEAGQTLNAYKLLTQLADS--------GVVPDIKTYNILINSFCKAGN 283
+ ++ V C L KL+++ D G+ + + +I+ CK
Sbjct: 569 KELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQ 628
Query: 284 MNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKA 343
+ A LF+ + KGL PD Y +L+DG ++ +A +RD M + + Y +
Sbjct: 629 VEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTS 688
Query: 344 LMTWLCRGKKISLAFSLYLEYL-KSLPGRDNDSINALEEYFMKGEVERAIR 393
L+ L ++ A S E + + + + I+ L++++ G ++ A+
Sbjct: 689 LVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVE 739
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 155/356 (43%), Gaps = 47/356 (13%)
Query: 12 TFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRM 71
T+ L++ CK G L +A L + + G + Y++LIDG A R EA L+G+M
Sbjct: 404 TYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKM 463
Query: 72 IKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQL 131
G++P++ Y ++ G + A+++ E+ RG+ PD Y I G C + ++
Sbjct: 464 DTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKI 523
Query: 132 DHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNAL 191
+ A+ + E+ ++ +T L+ K G E + ++M++L + VTF L
Sbjct: 524 EAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVL 583
Query: 192 INGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLN 251
I+GLCK KL + K+ F R++ +++ ++ +C+ Q
Sbjct: 584 IDGLCK-NKL-----------VSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEA 631
Query: 252 AYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLID 311
A L Q+ G+VPD Y L++ K GN+ A L + G+ D + Y +L+
Sbjct: 632 ATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVW 691
Query: 312 GL-----------------------------------YRVEREEDAFKIRDHMLKH 332
GL Y + ++A +++ +++KH
Sbjct: 692 GLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKH 747
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
Q + A F +++G CK ++E A +L + + G + Y+SL+DG FK EA +
Sbjct: 610 QANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALA 669
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
L +M + G+ D++ Y ++ GLS+ ++ +A EMI G+ PD +++K
Sbjct: 670 LRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHY 729
Query: 127 DIGQLDHARSLHVEISGH 144
++G +D A L + H
Sbjct: 730 ELGCIDEAVELQSYLMKH 747
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 96/209 (45%), Gaps = 1/209 (0%)
Query: 4 RRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNE 63
R + DL + + G C K+E A ++ ++ G Y++L+D +FK+ E
Sbjct: 501 RGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTE 560
Query: 64 AHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQR-GLLPDAHCYNAII 122
L M + I V+ + +++ GL V +AV F + GL +A + A+I
Sbjct: 561 GLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMI 620
Query: 123 KGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCF 182
G C Q++ A +L ++ + D +T L+ K+G V EA + ++M ++G
Sbjct: 621 DGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMK 680
Query: 183 PSAVTFNALINGLCKAGKLDEAHLLFYKM 211
+ + +L+ GL +L +A +M
Sbjct: 681 LDLLAYTSLVWGLSHCNQLQKARSFLEEM 709
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 132/530 (24%), Positives = 229/530 (43%), Gaps = 99/530 (18%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSL- 67
++ TF L+NGFCK+G+++ A L +++E+ G L YS+LIDG+FKA H L
Sbjct: 285 NVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLF 344
Query: 68 ----------------------------------YGRMIKGGILPDVILYAIMLRGLSNE 93
Y RM+ GI P+V+ Y I+++GL +
Sbjct: 345 SQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQD 404
Query: 94 GRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTH 153
GR+ EA M+ ++++RG+ P Y+++I GFC G L +L+ ++ D +
Sbjct: 405 GRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIY 464
Query: 154 TILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEI 213
+L+ + K+G++ A +M + V FN+LI+G C+ + DEA +F M I
Sbjct: 465 GVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGI 524
Query: 214 -GKSPSL---------------------------FFRLAQGSDHVSDSVSLQKKVEHMC- 244
G P + F L Q + +S +++ V H+
Sbjct: 525 YGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQ-RNKISADIAVCNVVIHLLF 583
Query: 245 EAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSV 304
+ + +A K L + + PDI TYN +I +C ++ A ++F+ L++ P++V
Sbjct: 584 KCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTV 643
Query: 305 TYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEY 364
T LI L + + A ++ M + +P+ Y LM W + I +F L+
Sbjct: 644 TLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLF--- 700
Query: 365 LKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVD 424
EE KG ++ YSI++ G C+ +VD
Sbjct: 701 ---------------EEMQEKGISP----------------SIVSYSIIIDGLCKRGRVD 729
Query: 425 EALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFE 474
EA IF + + + + LI G C L +A +++ + L G +
Sbjct: 730 EATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVK 779
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/415 (25%), Positives = 189/415 (45%), Gaps = 54/415 (13%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
++ T+ +L+ G C+ G++ EA + + + G + YSSLIDGF K +LY
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
MIK G PDV++Y +++ GLS +G + A++ +M+ + + + +N++I G+C +
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL 509
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHT---------------------------------- 154
+ D A + + + D T T
Sbjct: 510 NRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKIS 569
Query: 155 --ILICEMC-----KKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLL 207
I +C + K + +A + FN + + P VT+N +I G C +LDEA +
Sbjct: 570 ADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERI 629
Query: 208 FYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPD 267
F L + + ++V+L + +C+ A ++ + +A+ G P+
Sbjct: 630 F-------------ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPN 676
Query: 268 IKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRD 327
TY L++ F K+ ++ G+FKLF+++Q KG+SP V+Y +IDGL + R ++A I
Sbjct: 677 AVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFH 736
Query: 328 HMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEY 382
+ P Y L+ C+ ++ A LY L++ D+ AL EY
Sbjct: 737 QAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSEY 791
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/497 (24%), Positives = 223/497 (44%), Gaps = 32/497 (6%)
Query: 4 RRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNE 63
R F+ + + N +L G ++E A LL L+ G + + +LI+GF K +
Sbjct: 246 RGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDR 304
Query: 64 AHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIK 123
A L+ M + GI PD+I Y+ ++ G G +G K+F++ + +G+ D +++ I
Sbjct: 305 AFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTID 364
Query: 124 GFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFP 183
+ G L A ++ + + T+TILI +C+ G + EA M+ Q+ K G P
Sbjct: 365 VYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEP 424
Query: 184 SAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSL---------------------FF 221
S VT+++LI+G CK G L L+ M ++G P + F
Sbjct: 425 SIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFS 484
Query: 222 RLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTY------NILI 275
G + V ++ C + A K+ + G+ PD+ T+ +I+
Sbjct: 485 VKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIME 544
Query: 276 NSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCE 335
++FCK +LF +Q +S D +I L++ R EDA K +++++ E
Sbjct: 545 DAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKME 604
Query: 336 PSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLP-GRDNDSINALEEYFMK-GEVERAIR 393
P Y ++ C +++ A ++ E LK P G + ++ L K +++ AIR
Sbjct: 605 PDIVTYNTMICGYCSLRRLDEAERIF-ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIR 663
Query: 394 GLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLC 453
+ + N Y L+ F ++ ++ + +F + E I+ + S +I GLC
Sbjct: 664 MFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLC 723
Query: 454 AKRNLYDAVVIFLYSLD 470
+ + +A IF ++D
Sbjct: 724 KRGRVDEATNIFHQAID 740
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 135/341 (39%), Gaps = 62/341 (18%)
Query: 149 DTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLD------ 202
D C + C C+ GMV +A E+F +LG + ++N L + ++D
Sbjct: 147 DVCKFLMECC--CRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHF 204
Query: 203 -------------EAH-----LLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMC 244
AH LF K E+ K+ F RL VS K ++ +
Sbjct: 205 DKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALD-FHRLVMERGFRVGIVSCNKVLKGL- 262
Query: 245 EAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSV 304
Q A +LL+ + D G P++ T+ LIN FCK G M+ AF LFK ++ +G+ PD +
Sbjct: 263 SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLI 322
Query: 305 TYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEY 364
Y TLIDG ++ K+ L + V+ + + + ++ A +Y
Sbjct: 323 AYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRM 382
Query: 365 LKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVD 424
L +G+ N+ Y+IL+ G CQ ++
Sbjct: 383 L--------------------------CQGISP--------NVVTYTILIKGLCQDGRIY 408
Query: 425 EALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIF 465
EA ++ + + + + + LI G C NL ++
Sbjct: 409 EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 87/187 (46%)
Query: 5 RFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEA 64
+ + D+ T+N ++ G+C +L+EA + LL+ G + LI K + A
Sbjct: 602 KMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGA 661
Query: 65 HSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKG 124
++ M + G P+ + Y ++ S + + K+F EM ++G+ P Y+ II G
Sbjct: 662 IRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDG 721
Query: 125 FCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPS 184
C G++D A ++ + L D + ILI CK G + EA ++ M + G P
Sbjct: 722 LCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781
Query: 185 AVTFNAL 191
+ AL
Sbjct: 782 DLLQRAL 788
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 134/551 (24%), Positives = 241/551 (43%), Gaps = 106/551 (19%)
Query: 5 RFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEA 64
RF A + L+ G K+GK+EEA++L++ + G L Y++LID K R+++EA
Sbjct: 327 RFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEA 386
Query: 65 HSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKG 124
L+ RM K G+ P+ + Y+I++ G++ A+ EM+ GL + YN++I G
Sbjct: 387 ELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLING 446
Query: 125 FCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPS 184
C G + A E+ T+T L+ C KG + +A ++++M G PS
Sbjct: 447 HCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPS 506
Query: 185 AVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHM 243
TF L++GL +AG + +A LF +M E P + V+ +E
Sbjct: 507 IYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKP--------------NRVTYNVMIEGY 552
Query: 244 CEAGQTLNAYKLLTQLADSGVVPDIKTYNILI---------------------------- 275
CE G A++ L ++ + G+VPD +Y LI
Sbjct: 553 CEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNE 612
Query: 276 -------NSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDG-LYRVERE-------- 319
+ FC+ G + A + +++ +G+ D V YG LIDG L +R+
Sbjct: 613 ICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKE 672
Query: 320 --------------------------EDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKK 353
++AF I D M+ C P+ Y A++ LC+
Sbjct: 673 MHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGF 732
Query: 354 ISLAFSL--YLEYLKSLPGRDNDSINALEEYFMKGEVERA---------IRGLLELDFRF 402
++ A L ++ + S+P + + + KGEV+ ++GLL
Sbjct: 733 VNEAEVLCSKMQPVSSVP--NQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLA----- 785
Query: 403 RDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAV 462
N A Y++L+ GFC+ +++EA + + + ++ + + +I+ LC + ++ A+
Sbjct: 786 ---NTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAI 842
Query: 463 VIFLYSLDKGF 473
++ +KG
Sbjct: 843 ELWNSMTEKGI 853
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/431 (26%), Positives = 187/431 (43%), Gaps = 96/431 (22%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYS--SLIDGFFKA 58
M ++ + + T+ L+ G+C +GK+ +A+ L E G+GI S Y+ +L+ G F+A
Sbjct: 463 MINKKLEPTVVTYTSLMGGYCSKGKINKALRLYH--EMTGKGIAPSIYTFTTLLSGLFRA 520
Query: 59 RRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAH-- 116
+A L+ M + + P+ + Y +M+ G EG + +A + EM ++G++PD +
Sbjct: 521 GLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSY 580
Query: 117 ---------------------------------CYNAIIKGFCDIGQLDHARSLHVE--- 140
CY ++ GFC G+L+ A S+ E
Sbjct: 581 RPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQ 640
Query: 141 -------------ISG-----------------HD-GLH-DTCTHTILICEMCKKGMVRE 168
I G HD GL D +T +I K G +E
Sbjct: 641 RGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKE 700
Query: 169 AQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKME-IGKSPS------LFF 221
A +++ M GC P+ VT+ A+INGLCKAG ++EA +L KM+ + P+
Sbjct: 701 AFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLD 760
Query: 222 RLAQGSDHVSDSVSLQKKV---------------EHMCEAGQTLNAYKLLTQLADSGVVP 266
L +G + +V L + C G+ A +L+T++ GV P
Sbjct: 761 ILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSP 820
Query: 267 DIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIR 326
D TY +IN C+ ++ A +L+ + KG+ PD V Y TLI G A ++R
Sbjct: 821 DCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELR 880
Query: 327 DHMLKHVCEPS 337
+ ML+ P+
Sbjct: 881 NEMLRQGLIPN 891
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 125/509 (24%), Positives = 209/509 (41%), Gaps = 52/509 (10%)
Query: 49 SSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQ 108
S+L+ G K R + A L+ M+ GI PDV +Y ++R L + A +M A M
Sbjct: 196 SALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEA 255
Query: 109 RGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCK------ 162
G + YN +I G C ++ A + +++G D D T+ L+ +CK
Sbjct: 256 TGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEI 315
Query: 163 -----------------------------KGMVREAQEMFNQMEKLGCFPSAVTFNALIN 193
+G + EA + ++ G P+ +NALI+
Sbjct: 316 GLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALID 375
Query: 194 GLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNA 252
LCK K EA LLF +M +IG P + V+ ++ C G+ A
Sbjct: 376 SLCKGRKFHEAELLFDRMGKIGLRP--------------NDVTYSILIDMFCRRGKLDTA 421
Query: 253 YKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDG 312
L ++ D+G+ + YN LIN CK G+++ A ++ K L P VTY +L+ G
Sbjct: 422 LSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGG 481
Query: 313 LYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRD 372
+ A ++ M PS + L++ L R I A L+ E + +
Sbjct: 482 YCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPN 541
Query: 373 NDSINAL-EEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFS 431
+ N + E Y +G++ +A L E+ + + Y L+ G C + EA +
Sbjct: 542 RVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVD 601
Query: 432 VLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKELLECLLVSQ 491
L + N +N L+ G C + L +A+ + + +G +L L++ L +
Sbjct: 602 GLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHK 661
Query: 492 DKRKYAIDLIGRMKSRGYRLHKYQYRQTI 520
D RK L+ M RG + Y I
Sbjct: 662 D-RKLFFGLLKEMHDRGLKPDDVIYTSMI 689
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 126/491 (25%), Positives = 217/491 (44%), Gaps = 36/491 (7%)
Query: 4 RRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLL------ERDGRGIRLSGYSS------- 50
R F A+F +L++ K A SLL+ L D + S Y
Sbjct: 98 RGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSSSS 157
Query: 51 ----LIDGFFKARRYNEAHSLYGRMI-KGGILPDVILYAIMLRGLSNEGRVGEAVKMFAE 105
LI + ++RR + ++ MI K +LP+V + +L GL G A+++F +
Sbjct: 158 SFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFND 217
Query: 106 MIQRGLLPDAHCYNAIIKGFCDIGQLDHARSL--HVEISGHDGLHDTCTHTILICEMCKK 163
M+ G+ PD + Y +I+ C++ L A+ + H+E +G D + + +LI +CKK
Sbjct: 218 MVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCD--VNIVPYNVLIDGLCKK 275
Query: 164 GMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRL 223
V EA + + P VT+ L+ GLCK + + + +M L R
Sbjct: 276 QKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEM-------LCLRF 328
Query: 224 AQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGN 283
+ VS VE + + G+ A L+ ++ D GV P++ YN LI+S CK
Sbjct: 329 SPSEAAVSSL------VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRK 382
Query: 284 MNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKA 343
+ A LF + GL P+ VTY LID R + + A M+ + S Y +
Sbjct: 383 FHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNS 442
Query: 344 LMTWLCRGKKISLAFSLYLEYL-KSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRF 402
L+ C+ IS A E + K L + + Y KG++ +A+R E+ +
Sbjct: 443 LINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKG 502
Query: 403 RDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAV 462
++ ++ LL G +A + +A+ +F+ + E+N+ N + +I G C + ++ A
Sbjct: 503 IAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAF 562
Query: 463 VIFLYSLDKGF 473
+KG
Sbjct: 563 EFLKEMTEKGI 573
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 144/298 (48%), Gaps = 17/298 (5%)
Query: 13 FNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMI 72
+ LL+GFC++GKLEEA+S+ + + + G + L Y LIDG K + L M
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMH 674
Query: 73 KGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLD 132
G+ PD ++Y M+ S G EA ++ MI G +P+ Y A+I G C G ++
Sbjct: 675 DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVN 734
Query: 133 HARSLHVEISGHDGLHDTCTHTILICEMCKKGMV--REAQEMFNQMEKLGCFPSAVTFNA 190
A L ++ + + T+ + ++ KG V ++A E+ N + K G + T+N
Sbjct: 735 EAEVLCSKMQPVSSVPNQVTYGCFL-DILTKGEVDMQKAVELHNAILK-GLLANTATYNM 792
Query: 191 LINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTL 250
LI G C+ G+++EA L +M IG S D ++ + +C
Sbjct: 793 LIRGFCRQGRIEEASELITRM-IGDGVS------------PDCITYTTMINELCRRNDVK 839
Query: 251 NAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGT 308
A +L + + G+ PD YN LI+ C AG M A +L ++ +GL P++ T T
Sbjct: 840 KAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 110/275 (40%), Gaps = 45/275 (16%)
Query: 252 AYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLID 311
A +L + G+ PD+ Y +I S C+ +++ A ++ ++ G + V Y LID
Sbjct: 211 AMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLID 270
Query: 312 GLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGR 371
GL + ++ +A I+ + +P Y L+ LC+ ++ + + E L
Sbjct: 271 GLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSP 330
Query: 372 DNDSINALEEYFMK-GEVERAIRGLLELDFRFRDFNLAP----YSILLIGFCQAKKVDEA 426
++++L E K G++E A L L R DF ++P Y+ L+ C+ +K EA
Sbjct: 331 SEAAVSSLVEGLRKRGKIEEA----LNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEA 386
Query: 427 LIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKELLEC 486
++F + + + N + LI C +R D + FL
Sbjct: 387 ELLFDRMGKIGLRPNDVTYSILIDMFC-RRGKLDTALSFL-------------------- 425
Query: 487 LLVSQDKRKYAIDLIGRMKSRGYRLHKYQYRQTIS 521
G M G +L Y Y I+
Sbjct: 426 ---------------GEMVDTGLKLSVYPYNSLIN 445
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/489 (24%), Positives = 221/489 (45%), Gaps = 40/489 (8%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
F D +T++ +LN C K+E A L ++R G + Y+ ++D F KA +A
Sbjct: 479 FIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQAR 538
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
+ M + G P+V+ Y ++ +V A ++F M+ G LP+ Y+A+I G
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 598
Query: 126 CDIGQLDHARSLHVEISGHDGLHD----------------TCTHTILICEMCKKGMVREA 169
C GQ++ A + + G + D T+ L+ CK V EA
Sbjct: 599 CKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEA 658
Query: 170 QEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDH 229
+++ + M GC P+ + ++ALI+GLCK GKLDEA + +M P+ + + D
Sbjct: 659 RKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDR 718
Query: 230 VSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFK 289
+ K + + A K+L+++ ++ P++ Y +I+ CK G + A+K
Sbjct: 719 Y-----FKVKRQDL--------ASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYK 765
Query: 290 LFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLC 349
L + ++ KG P+ VTY +IDG + + E ++ + M P++ Y+ L+ C
Sbjct: 766 LMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCC 825
Query: 350 RGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAP 409
+ + +A +L E ++ + E F K +E GLL+ + AP
Sbjct: 826 KNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESL--GLLD---EIGQDDTAP 880
Query: 410 ----YSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVH--LISGLCAKRNLYDAVV 463
Y +L+ +A++++ AL + + F+ + S + LI LC + A
Sbjct: 881 FLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQ 940
Query: 464 IFLYSLDKG 472
+F KG
Sbjct: 941 LFSEMTKKG 949
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/445 (26%), Positives = 210/445 (47%), Gaps = 17/445 (3%)
Query: 11 ATFNVLLNGFCKQGKLEEAVSLLRLLERD-----GRGIRLS--GYSSLIDGFFKARRYNE 63
+N+L+ C K LL L E+ G+ L+ SS A +Y +
Sbjct: 408 VVYNILIGSICGD-KDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEK 466
Query: 64 AHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIK 123
A S+ MI G +PD Y+ +L L N ++ A +F EM + GL+ D + Y ++
Sbjct: 467 AFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVD 526
Query: 124 GFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFP 183
FC G ++ AR E+ + T+T LI K V A E+F M GC P
Sbjct: 527 SFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLP 586
Query: 184 SAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPS---LFFRLAQGSDHVSDSVSLQKKV 240
+ VT++ALI+G CKAG++++A +F +M K ++F+ + + V+ +
Sbjct: 587 NIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALL 646
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLS 300
+ C++ + A KLL ++ G P+ Y+ LI+ CK G ++ A ++ ++ G
Sbjct: 647 DGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFP 706
Query: 301 PDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSL 360
TY +LID ++V+R++ A K+ ML++ C P+ +Y ++ LC+ K A+ L
Sbjct: 707 ATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL 766
Query: 361 YLEYLKSLPGRDN--DSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFC 418
++ ++ + N ++ + M G++E + L + + N Y +L+ C
Sbjct: 767 -MQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCC 825
Query: 419 QAKKVDEALIIFSVLDEFNININPT 443
+ +D + ++L+E PT
Sbjct: 826 KNGALD---VAHNLLEEMKQTHWPT 847
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 120/507 (23%), Positives = 212/507 (41%), Gaps = 69/507 (13%)
Query: 5 RFQRDLATFNVLLNGFCKQGKLEEAVSLLRL-----LERDGRGIRLSGYS---------- 49
RF+ +T+N L+ F K +L+ A + R L DG +R YS
Sbjct: 230 RFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREA 289
Query: 50 -----------------SLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSN 92
LI G +A + EA RM LP+V+ Y+ +L G N
Sbjct: 290 LTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 349
Query: 93 EGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCT 152
+ ++G ++ M+ G P +N+++ +C G +A L ++ +
Sbjct: 350 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVV 409
Query: 153 HTILICEMCKK------GMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHL 206
+ ILI +C ++ A++ +++M G + + ++ LC AGK ++A
Sbjct: 410 YNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFS 469
Query: 207 LFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVP 266
+ +M + QG + D+ + K + ++C A + A+ L ++ G+V
Sbjct: 470 VIREM-----------IGQG--FIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVA 516
Query: 267 DIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIR 326
D+ TY I+++SFCKAG + A K F +++ G +P+ VTY LI + ++ A ++
Sbjct: 517 DVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF 576
Query: 327 DHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKG 386
+ ML C P+ Y AL+ C+ ++ A ++ S D D YF
Sbjct: 577 ETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDM------YFK-- 628
Query: 387 EVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCV 446
+ D N+ Y LL GFC++ +V+EA + + N
Sbjct: 629 ----------QYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYD 678
Query: 447 HLISGLCAKRNLYDAVVIFLYSLDKGF 473
LI GLC L +A + + GF
Sbjct: 679 ALIDGLCKVGKLDEAQEVKTEMSEHGF 705
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 161/349 (46%), Gaps = 57/349 (16%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M M + + ++ L++G CK GKL+EA + + G L YSSLID +FK +R
Sbjct: 665 MSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKR 724
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+ A + +M++ P+V++Y M+ GL G+ EA K+ M ++G P+ Y A
Sbjct: 725 QDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTA 784
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I GF IG+++ TC E+ +M G
Sbjct: 785 MIDGFGMIGKIE-----------------TCL------------------ELLERMGSKG 809
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSP-------------------SLFF 221
P+ VT+ LI+ CK G LD AH L +M+ P SL
Sbjct: 810 VAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGL 869
Query: 222 RLAQGSDHVSDSVSLQKK-VEHMCEAGQTLNAYKLLTQLA--DSGVVPDIKTYNILINSF 278
G D + +S+ + ++++ +A + A +LL ++A + +V TYN LI S
Sbjct: 870 LDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESL 929
Query: 279 CKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRD 327
C A + AF+LF ++ KG+ P+ ++ +LI GL+R + +A + D
Sbjct: 930 CLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 978
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 162/313 (51%), Gaps = 13/313 (4%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R Q DL T+ ++NG CK+G + A++LL +E + YS++ID K R
Sbjct: 209 MVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRH 268
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
++A +L+ M G+ P+VI Y+ ++ L N GR +A ++ ++MI+R + P+ ++A
Sbjct: 269 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSA 328
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I F G+L A L+ E+ + T++ LI C + EA++M M +
Sbjct: 329 LIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKD 388
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKV 240
C P+ VT+N LING CKA ++D+ LF +M V ++V+ +
Sbjct: 389 CLPNVVTYNTLINGFCKAKRVDKGMELFREM-------------SQRGLVGNTVTYTTLI 435
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLS 300
+A NA + Q+ GV P+I TYNIL++ CK G + A +F+ LQ +
Sbjct: 436 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 495
Query: 301 PDSVTYGTLIDGL 313
PD TY +I+G+
Sbjct: 496 PDIYTYNIMIEGM 508
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 190/380 (50%), Gaps = 23/380 (6%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
+L T+N+L+N FC+ +L A++LL + + G + +SL++GF R ++A +L
Sbjct: 112 NLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALV 171
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
+M++ G PD + + ++ GL + EAV + M+QRG PD Y A++ G C
Sbjct: 172 DQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKR 231
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
G D A +L ++ + ++ +I +CK +A +F +ME G P+ +T+
Sbjct: 232 GDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 291
Query: 189 NALINGLCKAGKLDEAHLLFYKM-EIGKSPSL--FFRLAQGSDHVSDSVSLQKKVEHMCE 245
++LI+ LC G+ +A L M E +P+L F L V +K E M +
Sbjct: 292 SSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIK 351
Query: 246 A---------GQTLNAYKLLTQLADS----------GVVPDIKTYNILINSFCKAGNMNG 286
+N + +L +L ++ +P++ TYN LIN FCKA ++
Sbjct: 352 RSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDK 411
Query: 287 AFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMT 346
+LF+++ +GL ++VTY TLI G ++ ++A + M+ P+ Y L+
Sbjct: 412 GMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD 471
Query: 347 WLCRGKKISLAFSLYLEYLK 366
LC+ K++ A ++ EYL+
Sbjct: 472 GLCKNGKLAKAMVVF-EYLQ 490
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/456 (24%), Positives = 210/456 (46%), Gaps = 49/456 (10%)
Query: 13 FNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMI 72
F+ LL+ K K + +S +E G L Y+ LI+ F + R + A +L G+M+
Sbjct: 81 FSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMM 140
Query: 73 KGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLD 132
K G PD++ +L G + R+ +AV + +M++ G PD + +I G +
Sbjct: 141 KLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKAS 200
Query: 133 HARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALI 192
A +L + D T+ ++ +CK+G A + N+ME + V ++ +I
Sbjct: 201 EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVI 260
Query: 193 NGLCKAGKLDEAHLLFYKME-IGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLN 251
+ LCK D+A LF +ME G P++ ++ + +C G+ +
Sbjct: 261 DSLCKYRHEDDALNLFTEMENKGVRPNV--------------ITYSSLISCLCNYGRWSD 306
Query: 252 AYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLID 311
A +LL+ + + + P++ T++ LI++F K G + A KL++++ + + P+ TY +LI+
Sbjct: 307 ASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLIN 366
Query: 312 GLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGR 371
G ++R +A ++ + M++ C P+ Y L+ C+ K++ L+ E +
Sbjct: 367 GFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQ----- 421
Query: 372 DNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFS 431
RGL+ N Y+ L+ GF QA+ D A ++F
Sbjct: 422 ---------------------RGLVG--------NTVTYTTLIHGFFQARDCDNAQMVFK 452
Query: 432 VLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLY 467
+ ++ N + L+ GLC L A+V+F Y
Sbjct: 453 QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEY 488
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/443 (24%), Positives = 201/443 (45%), Gaps = 51/443 (11%)
Query: 25 KLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYA 84
+L++A+ L ++ + + +S L+ K +++ S +M GI ++ Y
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 85 IMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGH 144
I++ R+ A+ + +M++ G PD N+++ GFC ++ A +L ++
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 145 DGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEA 204
DT T T LI + EA + ++M + GC P VT+ A++NGLCK G D A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 205 HLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGV 264
L KME K + + V ++ +C+ +A L T++ + GV
Sbjct: 238 LNLLNKMEAAKIEA-------------NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV 284
Query: 265 VPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFK 324
P++ TY+ LI+ C G + A +L D+ + ++P+ VT+ LID + + A K
Sbjct: 285 RPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEK 344
Query: 325 IRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFM 384
+ + M+K +P+ Y +L+ C ++
Sbjct: 345 LYEEMIKRSIDPNIFTYSSLINGFCMLDRL------------------------------ 374
Query: 385 KGEVERAIRGLLELDFRFRDF--NLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININP 442
GE ++ +LEL R +D N+ Y+ L+ GFC+AK+VD+ + +F + + + N
Sbjct: 375 -GEAKQ----MLELMIR-KDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNT 428
Query: 443 TSCVHLISGLCAKRNLYDAVVIF 465
+ LI G R+ +A ++F
Sbjct: 429 VTYTTLIHGFFQARDCDNAQMVF 451
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 179/398 (44%), Gaps = 33/398 (8%)
Query: 83 YAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSL--HVE 140
Y +LR ++ + +A+ +F M Q P ++ ++ + + D S +E
Sbjct: 46 YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME 105
Query: 141 ISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGK 200
I G H+ T+ ILI C+ + A + +M KLG P VT N+L+NG C +
Sbjct: 106 ILGIS--HNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNR 163
Query: 201 LDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQL 259
+ +A L +M E+G P D+V+ + + + A L+ ++
Sbjct: 164 ISDAVALVDQMVEMGYKP--------------DTVTFTTLIHGLFLHNKASEAVALIDRM 209
Query: 260 ADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVERE 319
G PD+ TY ++N CK G+ + A L ++ + + V Y T+ID L + E
Sbjct: 210 VQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHE 269
Query: 320 EDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINAL 379
+DA + M P+ Y +L++ LC + S A L + ++ + + +AL
Sbjct: 270 DDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSAL 329
Query: 380 EEYFM-KGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNI 438
+ F+ KG++ +A + E+ R D N+ YS L+ GFC ++ EA + ++ +
Sbjct: 330 IDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDC 389
Query: 439 NINPTSCVHLISGLC-AKRNLYDAVVIFLYSLDKGFEL 475
N + LI+G C AKR +DKG EL
Sbjct: 390 LPNVVTYNTLINGFCKAKR------------VDKGMEL 415
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 110/209 (52%), Gaps = 2/209 (0%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R+ +L TF+ L++ F K+GKL +A L + + + YSSLI+GF R
Sbjct: 314 MIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDR 373
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
EA + MI+ LP+V+ Y ++ G RV + +++F EM QRGL+ + Y
Sbjct: 374 LGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTT 433
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLH-DTCTHTILICEMCKKGMVREAQEMFNQMEKL 179
+I GF D+A+ + ++ G+H + T+ IL+ +CK G + +A +F +++
Sbjct: 434 LIHGFFQARDCDNAQMVFKQMVSV-GVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS 492
Query: 180 GCFPSAVTFNALINGLCKAGKLDEAHLLF 208
P T+N +I G+CKAGK + F
Sbjct: 493 TMEPDIYTYNIMIEGMCKAGKWKMGGIYF 521
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 98/238 (41%), Gaps = 1/238 (0%)
Query: 251 NAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLI 310
+A L +A S P I ++ L+++ K + + +++ G+S + TY LI
Sbjct: 61 DAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILI 120
Query: 311 DGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPG 370
+ R R A + M+K EP +L+ C G +IS A +L + ++
Sbjct: 121 NCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYK 180
Query: 371 RDNDSINAL-EEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALII 429
D + L F+ + A+ + + R +L Y ++ G C+ D AL +
Sbjct: 181 PDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNL 240
Query: 430 FSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKELLECL 487
+ ++ I N +I LC R+ DA+ +F +KG L+ CL
Sbjct: 241 LNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 167/349 (47%), Gaps = 14/349 (4%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D T+ L+ G+C++ L+ A + + G Y+ LI G ARR +EA L+
Sbjct: 252 DFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLF 311
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
+M P V Y ++++ L R EA+ + EM + G+ P+ H Y +I C
Sbjct: 312 VKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQ 371
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
+ + AR L ++ + + T+ LI CK+GM+ +A ++ ME P+ T+
Sbjct: 372 CKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTY 431
Query: 189 NALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQ 248
N LI G CK+ +L +E P D V+ ++ C +G
Sbjct: 432 NELIKGYCKSNVHKAMGVLNKMLERKVLP--------------DVVTYNSLIDGQCRSGN 477
Query: 249 TLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGT 308
+AY+LL+ + D G+VPD TY +I+S CK+ + A LF L+ KG++P+ V Y
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 537
Query: 309 LIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLA 357
LIDG + + ++A + + ML C P+ + AL+ LC K+ A
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA 586
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 196/419 (46%), Gaps = 17/419 (4%)
Query: 48 YSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMI 107
Y++L++ + +E +Y M++ + P++ Y M+ G G V EA + ++++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 108 QRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVR 167
+ GL PD Y ++I G+C LD A + E+ + +T LI +C +
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 168 EAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKME-IGKSPSLFFRLAQG 226
EA ++F +M+ CFP+ T+ LI LC + + EA L +ME G P++
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIH------ 359
Query: 227 SDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNG 286
+ ++ +C + A +LL Q+ + G++P++ TYN LIN +CK G +
Sbjct: 360 --------TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIED 411
Query: 287 AFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMT 346
A + + ++ + LSP++ TY LI G Y A + + ML+ P Y +L+
Sbjct: 412 AVDVVELMESRKLSPNTRTYNELIKG-YCKSNVHKAMGVLNKMLERKVLPDVVTYNSLID 470
Query: 347 WLCRGKKISLAFSLY-LEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDF 405
CR A+ L L + L + ++ VE A L+ + +
Sbjct: 471 GQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNP 530
Query: 406 NLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVI 464
N+ Y+ L+ G+C+A KVDEA ++ + N N + LI GLCA L +A ++
Sbjct: 531 NVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLL 589
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 200/418 (47%), Gaps = 15/418 (3%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M ++ +R+ + L++G C +++EA+ L ++ D + Y+ LI + R
Sbjct: 279 MPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSER 338
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+EA +L M + GI P++ Y +++ L ++ + +A ++ +M+++GL+P+ YNA
Sbjct: 339 KSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNA 398
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I G+C G ++ A + + +T T+ LI CK V +A + N+M +
Sbjct: 399 LINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERK 457
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKV 240
P VT+N+LI+G C++G D A+ L L V D + +
Sbjct: 458 VLPDVVTYNSLIDGQCRSGNFDSAYRL-------------LSLMNDRGLVPDQWTYTSMI 504
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLS 300
+ +C++ + A L L GV P++ Y LI+ +CKAG ++ A + + + K
Sbjct: 505 DSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCL 564
Query: 301 PDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSL 360
P+S+T+ LI GL + ++A + + M+K +P+ + L+ L + A+S
Sbjct: 565 PNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSR 624
Query: 361 YLEYLKSLPGRDNDSINA-LEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGF 417
+ + L S D + ++ Y +G + A + ++ +L YS L+ G+
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGY 682
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 179/374 (47%), Gaps = 21/374 (5%)
Query: 5 RFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEA 64
+++ + +N LLN + G ++E + + D + Y+ +++G+ K EA
Sbjct: 178 KYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEA 237
Query: 65 HSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKG 124
+ ++++ G+ PD Y ++ G + A K+F EM +G + Y +I G
Sbjct: 238 NQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHG 297
Query: 125 FCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPS 184
C ++D A L V++ + T+T+LI +C EA + +ME+ G P+
Sbjct: 298 LCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPN 357
Query: 185 AVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSL--FFRLAQG---SDHVSDSVSLQK 238
T+ LI+ LC K ++A L +M E G P++ + L G + D+V + +
Sbjct: 358 IHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVE 417
Query: 239 KVEH--MCEAGQTLN-------------AYKLLTQLADSGVVPDIKTYNILINSFCKAGN 283
+E + +T N A +L ++ + V+PD+ TYN LI+ C++GN
Sbjct: 418 LMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477
Query: 284 MNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKA 343
+ A++L + +GL PD TY ++ID L + +R E+A + D + + P+ +Y A
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 537
Query: 344 LMTWLCRGKKISLA 357
L+ C+ K+ A
Sbjct: 538 LIDGYCKAGKVDEA 551
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 181/379 (47%), Gaps = 32/379 (8%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R+ + T+N L+ G+CK + L ++LER ++ Y+SLIDG ++
Sbjct: 419 MESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVT-YNSLIDGQCRSGN 477
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
++ A+ L M G++PD Y M+ L RV EA +F + Q+G+ P+ Y A
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 537
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I G+C G++D A + ++ + L ++ T LI +C G ++EA + +M K+G
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 597
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKV 240
P+ T LI+ L K G D A+ F +M L+ G+ D+ + +
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYSRFQQM-----------LSSGTK--PDAHTYTTFI 644
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLS 300
+ C G+ L+A ++ ++ ++GV PD+ TY+ LI + G N AF + K ++ G
Sbjct: 645 QTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCE 704
Query: 301 PDSVTYGTLIDGLYRV--------ERE----------EDAFKIRDHMLKHVCEPSFAVYK 342
P T+ +LI L + E E + ++ + M++H P+ Y+
Sbjct: 705 PSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYE 764
Query: 343 ALMTWLCRGKKISLAFSLY 361
L+ +C + +A ++
Sbjct: 765 KLILGICEVGNLRVAEKVF 783
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 163/333 (48%), Gaps = 6/333 (1%)
Query: 4 RRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNE 63
R D T+ +++ CK ++EEA L LE+ G + Y++LIDG+ KA + +E
Sbjct: 491 RGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDE 550
Query: 64 AHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIK 123
AH + +M+ LP+ + + ++ GL +G++ EA + +M++ GL P +I
Sbjct: 551 AHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIH 610
Query: 124 GFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFP 183
G DHA S ++ D T+T I C++G + +A++M +M + G P
Sbjct: 611 RLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSP 670
Query: 184 SAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVE- 241
T+++LI G G+ + A + +M + G PS L+ + QK E
Sbjct: 671 DLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEP 730
Query: 242 HMCEAGQTL---NAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQL-K 297
+C + +LL ++ + V P+ K+Y LI C+ GN+ A K+F +Q +
Sbjct: 731 ELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNE 790
Query: 298 GLSPDSVTYGTLIDGLYRVEREEDAFKIRDHML 330
G+SP + + L+ ++++ +A K+ D M+
Sbjct: 791 GISPSELVFNALLSCCCKLKKHNEAAKVVDDMI 823
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 182/456 (39%), Gaps = 111/456 (24%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R+ D+ T+N L++G C+ G + A LL L+ G Y+S+ID K++R
Sbjct: 453 MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKR 512
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
EA L+ + + G+ P+V++Y ++ G G+V EA M +M+ + LP++ +NA
Sbjct: 513 VEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNA 572
Query: 121 IIKGFCDIGQL-----------------------------------DHARSLHVEISGHD 145
+I G C G+L DHA S ++
Sbjct: 573 LIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG 632
Query: 146 GLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAH 205
D T+T I C++G + +A++M +M + G P T+++LI G G+ + A
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAF 692
Query: 206 LLFYKM-EIGKSPS--LFFRL-----------AQGSDHVSDSVS-----------LQKKV 240
+ +M + G PS F L +GS+ ++S L+K V
Sbjct: 693 DVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMV 752
Query: 241 EH---------------MCEAGQTLNAYKLLTQLA-DSGVVPDIKTYNILINSFCKAGNM 284
EH +CE G A K+ + + G+ P +N L++ CK
Sbjct: 753 EHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKH 812
Query: 285 NGAFKLFKDLQLKGLSP-----------------------------------DSVTYGTL 309
N A K+ D+ G P D + + +
Sbjct: 813 NEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKII 872
Query: 310 IDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALM 345
IDG+ + E +++ + M K+ C+ S Y L+
Sbjct: 873 IDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLI 908
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 161/350 (46%), Gaps = 15/350 (4%)
Query: 117 CYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQM 176
CYN ++ G +D + +++E+ + T+ ++ CK G V EA + +++
Sbjct: 185 CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKI 244
Query: 177 EKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSL 236
+ G P T+ +LI G C+ LD A +F +M + +G + V+
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPL-----------KGCRR--NEVAY 291
Query: 237 QKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQL 296
+ +C A + A L ++ D P ++TY +LI S C + + A L K+++
Sbjct: 292 THLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEE 351
Query: 297 KGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISL 356
G+ P+ TY LID L + E A ++ ML+ P+ Y AL+ C+ I
Sbjct: 352 TGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIED 411
Query: 357 AFSLYLEYLKSLPGRDND-SINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLI 415
A + +E ++S N + N L + + K V +A+ L ++ R ++ Y+ L+
Sbjct: 412 AVDV-VELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLID 470
Query: 416 GFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIF 465
G C++ D A + S++++ + + + +I LC + + +A +F
Sbjct: 471 GQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLF 520
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 150/356 (42%), Gaps = 69/356 (19%)
Query: 12 TFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRM 71
TFN L++G C GKL+EA L + + G +S + LI K ++ A+S + +M
Sbjct: 569 TFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQM 628
Query: 72 IKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQL 131
+ G PD Y ++ EGR+ +A M A+M + G+ PD Y+++IKG+ D+GQ
Sbjct: 629 LSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQT 688
Query: 132 DHA-------RSLHVEISGHDGLH-----------------------------DTCT--- 152
+ A R E S H L DT
Sbjct: 689 NFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELL 748
Query: 153 -----HTI---------LICEMCKKGMVREAQEMFNQMEK-LGCFPSAVTFNALINGLCK 197
H++ LI +C+ G +R A+++F+ M++ G PS + FNAL++ CK
Sbjct: 749 EKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCK 808
Query: 198 AGKLDEAHLLFYKME-IGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLL 256
K +EA + M +G P L S + + + + G+ +
Sbjct: 809 LKKHNEAAKVVDDMICVGHLPQL--------------ESCKVLICGLYKKGEKERGTSVF 854
Query: 257 TQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDG 312
L G D + I+I+ K G + ++LF ++ G S TY LI+G
Sbjct: 855 QNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 135/287 (47%), Gaps = 17/287 (5%)
Query: 195 LCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQG--------------SDHVSDSV-SLQKK 239
LC+ DE L YK+ IG +L LA+ D V ++ + K
Sbjct: 165 LCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKM 224
Query: 240 VEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGL 299
V C+ G A + ++++ ++G+ PD TY LI +C+ +++ AFK+F ++ LKG
Sbjct: 225 VNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGC 284
Query: 300 SPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFS 359
+ V Y LI GL R ++A + M C P+ Y L+ LC ++ S A +
Sbjct: 285 RRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALN 344
Query: 360 LYLEYLKSLPGRDNDSINAL-EEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFC 418
L E ++ + + L + + + E+A L ++ + N+ Y+ L+ G+C
Sbjct: 345 LVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYC 404
Query: 419 QAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIF 465
+ +++A+ + +++ ++ N + LI G C K N++ A+ +
Sbjct: 405 KRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVL 450
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 142/327 (43%), Gaps = 24/327 (7%)
Query: 215 KSPSLFFRL-AQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNI 273
KSPSL + A HVS SL + LN ++Q + + +Y
Sbjct: 77 KSPSLKSMVSAISPSHVSSLFSLD------LDPKTALNFSHWISQ--NPRYKHSVYSYAS 128
Query: 274 LINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHV 333
L+ G + FK+ + L +K S DSV + L R +++ F+++ ++
Sbjct: 129 LLTLLINNGYVGVVFKI-RLLMIK--SCDSVGDALYVLDLCRKMNKDERFELKYKLI--- 182
Query: 334 CEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMK-GEVERAI 392
Y L+ L R + +Y+E L+ + + N + + K G VE A
Sbjct: 183 ----IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEAN 238
Query: 393 RGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGL 452
+ + ++ D + Y+ L++G+CQ K +D A +F+ + N + HLI GL
Sbjct: 239 QYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGL 298
Query: 453 CAKRNLYDAVVIFLYSLDKGFELGPKI-CKELLECLLVSQDKRKYAIDLIGRMKSRGYRL 511
C R + +A+ +F+ D E P + +L L +++ A++L+ M+ G +
Sbjct: 299 CVARRIDEAMDLFVKMKDD--ECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKP 356
Query: 512 HKYQYRQTI-SLLQQLQEGKAVKLFSE 537
+ + Y I SL Q + KA +L +
Sbjct: 357 NIHTYTVLIDSLCSQCKFEKARELLGQ 383
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 147/598 (24%), Positives = 269/598 (44%), Gaps = 73/598 (12%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLL-RLLERDGRGIRLSGY-SSLIDGFFKARRYNE 63
F+ + FN LLN + K + + AV ++ ++LE D I Y + + + E
Sbjct: 159 FEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDV--IPFFPYVNRTLSALVQRNSLTE 216
Query: 64 AHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIK 123
A LY RM+ G+ D + +++R E + EA+++ + I+RG PD+ Y+ ++
Sbjct: 217 AKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQ 276
Query: 124 GFCDIGQLDHARSLHVEISG-----------------------------------HDGLH 148
C L A SL E+ DG+
Sbjct: 277 ACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGIS 336
Query: 149 -DTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLL 207
+ T LI CK + A +F++MEK G P++VTF+ LI K G++++A
Sbjct: 337 MNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEF 396
Query: 208 FYKMEI-GKSPSLFFR------LAQGSDH--------------VSDSVSLQKKVEHMCEA 246
+ KME+ G +PS+F +G H +++ + +C+
Sbjct: 397 YKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQ 456
Query: 247 GQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTY 306
G+T A +LL+++ G+ P++ +YN ++ C+ NM+ A +F ++ KGL P++ TY
Sbjct: 457 GKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTY 516
Query: 307 GTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLK 366
LIDG +R E++A ++ +HM E + VY+ ++ LC+ + S A L ++
Sbjct: 517 SILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIE 576
Query: 367 S----LPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKK 422
+ +SI ++ +F +GE++ A+ E+ N+ Y+ L+ G C+ +
Sbjct: 577 EKRLCVSCMSYNSI--IDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNR 634
Query: 423 VDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKE 482
+D+AL + + + ++ + LI G C + N+ A +F L++G I
Sbjct: 635 MDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNS 694
Query: 483 LLECLLVSQDKRKYAIDLIGRMKSRGYRLHKYQYRQTISLLQQLQEGK---AVKLFSE 537
L+ + A+DL +M G R Y I L L++G A +L++E
Sbjct: 695 LISGFR-NLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGL--LKDGNLILASELYTE 749
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 125/521 (23%), Positives = 235/521 (45%), Gaps = 60/521 (11%)
Query: 12 TFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRM 71
T+ ++ KQG +++A+ L + DG + + +SLI G K A L+ +M
Sbjct: 306 TYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKM 365
Query: 72 IKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQL 131
K G P+ + +++++ G + +A++ + +M GL P + II+G+ +
Sbjct: 366 EKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKH 425
Query: 132 DHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNAL 191
+ A L E S GL + ++ +CK+G EA E+ ++ME G P+ V++N +
Sbjct: 426 EEALKLFDE-SFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNV 484
Query: 192 INGLCKAGKLDEAHLLFYK-MEIGKSPSLF---------FR------LAQGSDHVSDS-- 233
+ G C+ +D A ++F +E G P+ + FR + +H++ S
Sbjct: 485 MLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNI 544
Query: 234 ----VSLQKKVEHMCEAGQTLNAYKLLTQLADSG-VVPDIKTYNILINSFCKAGNMNGAF 288
V Q + +C+ GQT A +LL + + + +YN +I+ F K G M+ A
Sbjct: 545 EVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAV 604
Query: 289 KLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWL 348
++++ G+SP+ +TY +L++GL + R + A ++RD M + Y AL+
Sbjct: 605 AAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGF 664
Query: 349 CRGKKISLAFSLYLEYLKS------------LPGRDN--DSINALEEY--FMK------- 385
C+ + A +L+ E L+ + G N + + AL+ Y +K
Sbjct: 665 CKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDL 724
Query: 386 GEVERAIRGLL---------ELDFRFRDFNLAP----YSILLIGFCQAKKVDEALIIFSV 432
G I GLL EL + L P Y++++ G + + + + +F
Sbjct: 725 GTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEE 784
Query: 433 LDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGF 473
+ + N+ N +I+G + NL +A + LDKG
Sbjct: 785 MKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGI 825
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 182/402 (45%), Gaps = 61/402 (15%)
Query: 6 FQRDLATF---NVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSS------------ 50
F+ LA N +L+ CKQGK +EA LL +E G G + Y++
Sbjct: 436 FETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMD 495
Query: 51 -----------------------LIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIML 87
LIDG F+ A + M I + ++Y ++
Sbjct: 496 LARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTII 555
Query: 88 RGLSNEGRVGEAVKMFAEMIQ-RGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDG 146
GL G+ +A ++ A MI+ + L YN+II GF G++D A + + E+ G+
Sbjct: 556 NGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGI 615
Query: 147 LHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHL 206
+ T+T L+ +CK + +A EM ++M+ G + ALI+G CK ++ A
Sbjct: 616 SPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASA 675
Query: 207 LFYKM-EIGKSPS--LFFRLAQGSDHVSDSVS---LQKK----------------VEHMC 244
LF ++ E G +PS ++ L G ++ + V+ L KK ++ +
Sbjct: 676 LFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLL 735
Query: 245 EAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSV 304
+ G + A +L T++ G+VPD Y +++N K G K+F++++ ++P+ +
Sbjct: 736 KDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVL 795
Query: 305 TYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMT 346
Y +I G YR ++AF++ D ML P A + L++
Sbjct: 796 IYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVS 837
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 147/303 (48%), Gaps = 16/303 (5%)
Query: 12 TFNVLLNGFCKQGKLEEAVSLL-RLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGR 70
+ ++NG CK G+ +A LL ++E + Y+S+IDGFFK + A + Y
Sbjct: 550 VYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEE 609
Query: 71 MIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQ 130
M GI P+VI Y ++ GL R+ +A++M EM +G+ D Y A+I GFC
Sbjct: 610 MCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSN 669
Query: 131 LDHARSLHVEISGHDGLHDT-CTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFN 189
++ A +L E+ +GL+ + + LI G + A +++ +M K G T+
Sbjct: 670 MESASALFSELL-EEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYT 728
Query: 190 ALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQT 249
LI+GL K G L A L+ +M Q V D + V + + GQ
Sbjct: 729 TLIDGLLKDGNLILASELYTEM-------------QAVGLVPDEIIYTVIVNGLSKKGQF 775
Query: 250 LNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTL 309
+ K+ ++ + V P++ YN +I + GN++ AF+L ++ KG+ PD T+ L
Sbjct: 776 VKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDIL 835
Query: 310 IDG 312
+ G
Sbjct: 836 VSG 838
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 90/186 (48%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D+ + L++GFCK+ +E A +L L +G Y+SLI GF A LY
Sbjct: 653 DIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLY 712
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
+M+K G+ D+ Y ++ GL +G + A +++ EM GL+PD Y I+ G
Sbjct: 713 KKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKK 772
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
GQ + E+ ++ + + +I ++G + EA + ++M G P TF
Sbjct: 773 GQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATF 832
Query: 189 NALING 194
+ L++G
Sbjct: 833 DILVSG 838
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 189/391 (48%), Gaps = 24/391 (6%)
Query: 12 TFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRM 71
+ +++ G C++G++E++ L++ G Y+++I+ + K R ++ + M
Sbjct: 226 SLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVM 285
Query: 72 IKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQL 131
K G++ + + Y +++ G++ +A K+F EM +RG+ D H Y ++I C G +
Sbjct: 286 KKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNM 345
Query: 132 DHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNAL 191
A L E++ + T+ LI +CK G + A+ + N+M+ G + V FN L
Sbjct: 346 KRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTL 405
Query: 192 INGLCKAGKLDEAHLLFYKME-----------------------IGKSPSLFFRLAQGSD 228
I+G C+ G +DEA +++ ME ++ FR+ +G
Sbjct: 406 IDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGV 465
Query: 229 HVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAF 288
+S +VS ++ C+ G A +L +++ GV P+ TYN++I ++CK G + A
Sbjct: 466 KLS-TVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEAR 524
Query: 289 KLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWL 348
KL +++ G+ PDS TY +LI G + ++A ++ M + + Y +++ L
Sbjct: 525 KLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGL 584
Query: 349 CRGKKISLAFSLYLEYLKSLPGRDNDSINAL 379
+ K AF LY E + DN AL
Sbjct: 585 SKAGKSDEAFGLYDEMKRKGYTIDNKVYTAL 615
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 145/345 (42%), Gaps = 48/345 (13%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R + D+ + L++ C++G ++ A L L G Y +LIDG K
Sbjct: 320 MRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGE 379
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
A L M G+ +++ ++ G +G V EA ++ M Q+G D N
Sbjct: 380 MGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNT 439
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
I F + + D A+ + T ++T LI CK+G V EA+ +F +M G
Sbjct: 440 IASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKG 499
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKV 240
P+A+T+N +I CK GK+ EA L ME A G D
Sbjct: 500 VQPNAITYNVMIYAYCKQGKIKEARKLRANME-----------ANGMD------------ 536
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLS 300
PD TY LI+ C A N++ A +LF ++ LKGL
Sbjct: 537 -------------------------PDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLD 571
Query: 301 PDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALM 345
+SVTY +I GL + + ++AF + D M + VY AL+
Sbjct: 572 QNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 104/461 (22%), Positives = 191/461 (41%), Gaps = 15/461 (3%)
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+ E ++ M+K G+ D + L R+ +++F M+ G+ +
Sbjct: 170 FEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTI 229
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+++G C G+++ ++ L E S + T+ +I K+ + + M+K G
Sbjct: 230 VVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDG 289
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKV 240
+ VT+ L+ K GK+ +A LF +M R + HV S+ +
Sbjct: 290 VVYNKVTYTLLMELSVKNGKMSDAEKLFDEMR--------ERGIESDVHVYTSL-----I 336
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLS 300
C G A+ L +L + G+ P TY LI+ CK G M A L ++Q KG++
Sbjct: 337 SWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVN 396
Query: 301 PDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSL 360
V + TLIDG R ++A I D M + + + + R K+ A
Sbjct: 397 ITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQW 456
Query: 361 YLEYLKSLPGRDNDS-INALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQ 419
++ S N ++ Y +G VE A R +E+ + N Y++++ +C+
Sbjct: 457 LFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCK 516
Query: 420 AKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKI 479
K+ EA + + ++ ++ + + LI G C N+ +A+ +F KG + +
Sbjct: 517 QGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNS-V 575
Query: 480 CKELLECLLVSQDKRKYAIDLIGRMKSRGYRLHKYQYRQTI 520
++ L K A L MK +GY + Y I
Sbjct: 576 TYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 105/199 (52%), Gaps = 8/199 (4%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVS-LLRLLERDGRGIRLS--GYSSLIDGFFK 57
M + FQ D+ T N + + F + + +EA L R++E G++LS Y++LID + K
Sbjct: 425 MEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEG---GVKLSTVSYTNLIDVYCK 481
Query: 58 ARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHC 117
EA L+ M G+ P+ I Y +M+ +G++ EA K+ A M G+ PD++
Sbjct: 482 EGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYT 541
Query: 118 YNAIIKGFCDIGQLDHARSLHVEISGHDGL-HDTCTHTILICEMCKKGMVREAQEMFNQM 176
Y ++I G C +D A L E+ G GL ++ T+T++I + K G EA ++++M
Sbjct: 542 YTSLIHGECIADNVDEAMRLFSEM-GLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEM 600
Query: 177 EKLGCFPSAVTFNALINGL 195
++ G + ALI +
Sbjct: 601 KRKGYTIDNKVYTALIGSM 619
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 166/341 (48%), Gaps = 16/341 (4%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
+ D+AT+N+L+N CK+GK E AV L + G Y+ LI + K++ Y+ A
Sbjct: 342 KPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASK 401
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
L +M + G PD++ Y I++ GL G + +AV M ++I RG+ PDA YN ++ G C
Sbjct: 402 LLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLC 461
Query: 127 DIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAV 186
G+ A+ L E+ + L D + LI + G EA+++F+ + G V
Sbjct: 462 KTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVV 521
Query: 187 TFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDH-VSDSVSLQKKVEHMCE 245
NA+I G C++G LDEA +M +H V D + ++ +
Sbjct: 522 HHNAMIKGFCRSGMLDEALACMNRM--------------NEEHLVPDKFTYSTIIDGYVK 567
Query: 246 AGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVT 305
A K+ + + P++ TY LIN FC G+ A + FK++QL+ L P+ VT
Sbjct: 568 QQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVT 627
Query: 306 YGTLIDGLYRVERE-EDAFKIRDHMLKHVCEPSFAVYKALM 345
Y TLI L + E A + M+ + C P+ + L+
Sbjct: 628 YTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLL 668
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 179/374 (47%), Gaps = 25/374 (6%)
Query: 3 MRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGY--SSLIDGFFK-AR 59
++ F L TF ++NGFCK+G + LL E RG+R+S + +++ID ++
Sbjct: 268 LKGFMPTLETFGTMINGFCKEGDFVASDRLLS--EVKERGLRVSVWFLNNIIDAKYRHGY 325
Query: 60 RYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYN 119
+ + A S+ G +I PDV Y I++ L EG+ AV E ++GL+P+ Y
Sbjct: 326 KVDPAESI-GWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYA 384
Query: 120 AIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKL 179
+I+ +C + D A L ++++ D T+ ILI + G + +A M ++
Sbjct: 385 PLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDR 444
Query: 180 GCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKK 239
G P A +N L++GLCK G+ A LLF +M + + D+
Sbjct: 445 GVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEM-------------LDRNILPDAYVYATL 491
Query: 240 VEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGL 299
++ +G A K+ + + GV D+ +N +I FC++G ++ A + + L
Sbjct: 492 IDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHL 551
Query: 300 SPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMT-WLCRGKKISLAF 358
PD TY T+IDG + + A KI +M K+ C+P+ Y +L+ + C+G F
Sbjct: 552 VPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGD-----F 606
Query: 359 SLYLEYLKSLPGRD 372
+ E K + RD
Sbjct: 607 KMAEETFKEMQLRD 620
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 108/455 (23%), Positives = 211/455 (46%), Gaps = 17/455 (3%)
Query: 16 LLNGFCKQGKLEEAVSLLR-LLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKG 74
+L+ + + G L +AV + ++E + +SL+ K+RR +A +Y M
Sbjct: 140 VLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDR 199
Query: 75 GILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHA 134
G D I+++G+ NEG+V K+ +G +P+ YN II G+C +G +++A
Sbjct: 200 GDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENA 259
Query: 135 RSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALING 194
+ E+ + T +I CK+G + + +++++ G S N +I+
Sbjct: 260 YLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDA 319
Query: 195 LCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYK 254
+ G YK++ +S +D D + + +C+ G+ A
Sbjct: 320 KYRHG---------YKVDPAESIGWII----ANDCKPDVATYNILINRLCKEGKKEVAVG 366
Query: 255 LLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLY 314
L + + G++P+ +Y LI ++CK+ + A KL + +G PD VTYG LI GL
Sbjct: 367 FLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLV 426
Query: 315 RVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDND 374
+DA ++ ++ P A+Y LM+ LC+ + A L+ E L D
Sbjct: 427 VSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAY 486
Query: 375 SINALEEYFMK-GEVERAIRGLLELDF-RFRDFNLAPYSILLIGFCQAKKVDEALIIFSV 432
L + F++ G+ + A R + L + ++ ++ ++ GFC++ +DEAL +
Sbjct: 487 VYATLIDGFIRSGDFDEA-RKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNR 545
Query: 433 LDEFNININPTSCVHLISGLCAKRNLYDAVVIFLY 467
++E ++ + + +I G ++++ A+ IF Y
Sbjct: 546 MNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRY 580
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 155/351 (44%), Gaps = 39/351 (11%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSL-LRLLERDGRGIRLSGYSSLIDGFFKAR 59
M R + D+ T+ +L++G G +++AV++ ++L++R G + Y+ L+ G K
Sbjct: 406 MAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDR-GVSPDAAIYNMLMSGLCKTG 464
Query: 60 RYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYN 119
R+ A L+ M+ ILPD +YA ++ G G EA K+F+ +++G+ D +N
Sbjct: 465 RFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHN 524
Query: 120 AIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKL 179
A+IKGFC G LD A + ++ + D T++ +I K+ + A ++F MEK
Sbjct: 525 AMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKN 584
Query: 180 GCFPSAVTFNALINGLCKAGKLDEAHLLFYKME-------IGKSPSLFFRLAQGSDHVSD 232
C P+ VT+ +LING C G A F +M+ + +L LA+ S +
Sbjct: 585 KCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEK 644
Query: 233 SV----------SLQKKVEHMC--------------------EAGQTLNAYKLLTQLADS 262
+V + +V C GQ+ + ++
Sbjct: 645 AVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSD 704
Query: 263 GVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGL 313
G YN + C G + A + KG SPD V++ ++ G
Sbjct: 705 GWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGF 755
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 172/400 (43%), Gaps = 49/400 (12%)
Query: 77 LPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARS 136
+PDVI +L L R+G+A K++ EM RG D + ++KG C+ G+++ R
Sbjct: 167 VPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRK 226
Query: 137 LHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLC 196
L G + + + +I CK G + A +F +++ G P+ TF +ING C
Sbjct: 227 LIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFC 286
Query: 197 KAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKL 255
K G + L ++ E G S++F L ++ G ++ +
Sbjct: 287 KEGDFVASDRLLSEVKERGLRVSVWF--------------LNNIIDAKYRHGYKVDPAES 332
Query: 256 LTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYR 315
+ + + PD+ TYNILIN CK G A + KGL P++++Y LI +
Sbjct: 333 IGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCK 392
Query: 316 VEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDS 375
+ + A K+ M + C+P Y L+ L + G +D+
Sbjct: 393 SKEYDIASKLLLQMAERGCKPDIVTYGILIHGLV------------------VSGHMDDA 434
Query: 376 INALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDE 435
+N +V+ RG+ + A Y++L+ G C+ + A ++FS + +
Sbjct: 435 VNM--------KVKLIDRGVSP--------DAAIYNMLMSGLCKTGRFLPAKLLFSEMLD 478
Query: 436 FNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFEL 475
NI + LI G + +A +F S++KG ++
Sbjct: 479 RNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKV 518
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 125/289 (43%), Gaps = 10/289 (3%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R D + L++GF + G +EA + L G + + ++++I GF ++
Sbjct: 476 MLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGM 535
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+EA + RM + ++PD Y+ ++ G + + A+K+F M + P+ Y +
Sbjct: 536 LDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTS 595
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVRE-AQEMFNQMEKL 179
+I GFC G A E+ D + + T+T LI + K+ E A + M
Sbjct: 596 LINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTN 655
Query: 180 GCFPSAVTFNALINGLCK--AGK-LDEAHLLFYKMEIGKSP--SLFFRLAQGSDHVSDSV 234
C P+ VTFN L+ G K +GK L E G+S S FF + +
Sbjct: 656 KCVPNEVTFNCLLQGFVKKTSGKVLAEPD----GSNHGQSSLFSEFFHRMKSDGWSDHAA 711
Query: 235 SLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGN 283
+ + +C G A ++ G PD ++ +++ FC GN
Sbjct: 712 AYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGN 760
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 94/448 (20%), Positives = 182/448 (40%), Gaps = 54/448 (12%)
Query: 49 SSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQ 108
SS + + R +NE + G + + + +L + G + +AV+++ +++
Sbjct: 103 SSFLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVE 162
Query: 109 -RGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVR 167
+PD N+++ +L AR ++ E+ D + IL+ MC +G V
Sbjct: 163 LYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVE 222
Query: 168 EAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGS 227
+++ GC P +++FY IG
Sbjct: 223 VGRKLIEGRWGKGCIP---------------------NIVFYNTIIGG------------ 249
Query: 228 DHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGA 287
C+ G NAY + +L G +P ++T+ +IN FCK G+ +
Sbjct: 250 ---------------YCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVAS 294
Query: 288 FKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTW 347
+L +++ +GL +ID YR + D + ++ + C+P A Y L+
Sbjct: 295 DRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINR 354
Query: 348 LCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKG-EVERAIRGLLELDFRFRDFN 406
LC+ K +A E K +N S L + + K E + A + LL++ R +
Sbjct: 355 LCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPD 414
Query: 407 LAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVH--LISGLCAKRNLYDAVVI 464
+ Y IL+ G + +D+A+ + L + ++P + ++ L+SGLC A ++
Sbjct: 415 IVTYGILIHGLVVSGHMDDAVNMKVKL--IDRGVSPDAAIYNMLMSGLCKTGRFLPAKLL 472
Query: 465 FLYSLDKGFELGPKICKELLECLLVSQD 492
F LD+ + L++ + S D
Sbjct: 473 FSEMLDRNILPDAYVYATLIDGFIRSGD 500
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 127/467 (27%), Positives = 218/467 (46%), Gaps = 25/467 (5%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D TFN L+NGFCK ++EA + + +E + Y+++IDG +A + AH++
Sbjct: 208 DSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVL 267
Query: 69 GRMIKGG--ILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
M+K + P+V+ Y ++RG + + EAV +F +M+ RGL P+A YN +IKG
Sbjct: 268 SGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLS 327
Query: 127 DIGQLDHARSLHVEISGHDGLH----DTCTHTILICEMCKKGMVREAQEMFNQMEKLGCF 182
+ + D + + I G+D D CT ILI C G + A ++F +M +
Sbjct: 328 EAHRYDEIKD--ILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLH 385
Query: 183 PSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSD-SVSLQKKVE 241
P + +++ LI LC + D A LF E+ + L G D + + E
Sbjct: 386 PDSASYSVLIRTLCMRNEFDRAETLFN--ELFEKEVLL-----GKDECKPLAAAYNPMFE 438
Query: 242 HMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSP 301
++C G+T A K+ QL GV D +Y LI C+ G A++L + + P
Sbjct: 439 YLCANGKTKQAEKVFRQLMKRGV-QDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVP 497
Query: 302 DSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLY 361
D TY LIDGL ++ A ML+ P + +++ L + K + +F L
Sbjct: 498 DLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLV 557
Query: 362 LEYLKSLPGRDND-SINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQA 420
L+ ++ D S + F + E+A L + + + L LL C+
Sbjct: 558 TLMLEKRIRQNIDLSTQVVRLLFSSAQKEKA---FLIVRLLYDNGYLVKMEELLGYLCEN 614
Query: 421 KKVDEA--LIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIF 465
+K+ +A L++F + ++I+ +C +I GLC + +A ++
Sbjct: 615 RKLLDAHTLVLFCLEKSQMVDID--TCNTVIEGLCKHKRHSEAFSLY 659
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 171/398 (42%), Gaps = 72/398 (18%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRG-IRLSG--YSSLIDGFFKARRYN 62
F +F ++L + L A + L +ER G ++L ++SLI + A +
Sbjct: 96 FSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQ 155
Query: 63 EAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQR-GLLPDAHCYNAI 121
E+ L+ M + GI P V+ + +L L GR G A +F EM + G+ PD++ +N +
Sbjct: 156 ESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTL 215
Query: 122 IKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGC 181
I GF CK MV EA +F ME C
Sbjct: 216 INGF-----------------------------------CKNSMVDEAFRIFKDMELYHC 240
Query: 182 FPSAVTFNALINGLCKAGKLDEAHLLFYKM-----EIGKSPSLFFRLAQG---------- 226
P VT+N +I+GLC+AGK+ AH + M ++ + + L +G
Sbjct: 241 NPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEA 300
Query: 227 ----SDHVS-----DSVSLQKKVEHMCEAGQTLNAYKLLTQLAD--SGVVPDIKTYNILI 275
D +S ++V+ ++ + EA + +L D + PD T+NILI
Sbjct: 301 VLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILI 360
Query: 276 NSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGL---YRVEREEDAFK--IRDHML 330
+ C AG+++ A K+F+++ L PDS +Y LI L +R E F +L
Sbjct: 361 KAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVL 420
Query: 331 --KHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLK 366
K C+P A Y + +LC K A ++ + +K
Sbjct: 421 LGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMK 458
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 142/306 (46%), Gaps = 27/306 (8%)
Query: 188 FNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEA 246
FN+LI AG E+ LF M ++G SPS+ ++ + + +
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSV--------------LTFNSLLSILLKR 186
Query: 247 GQTLNAYKLLTQLADS-GVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVT 305
G+T A+ L ++ + GV PD T+N LIN FCK ++ AF++FKD++L +PD VT
Sbjct: 187 GRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVT 246
Query: 306 YGTLIDGLYRVEREEDAFKIRDHMLKHVCE--PSFAVYKALMTWLCRGKKISLAFSLYLE 363
Y T+IDGL R + + A + MLK + P+ Y L+ C ++I A ++ +
Sbjct: 247 YNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHD 306
Query: 364 Y----LKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQ 419
LK N I L E E++ + G + F + ++IL+ C
Sbjct: 307 MLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAP-DACTFNILIKAHCD 365
Query: 420 AKKVDEALIIFSVLDEFNININPTSCVH--LISGLCAKRNLYDAVVIFLYSLDKGFELGP 477
A +D A+ +F + N+ ++P S + LI LC + A +F +K LG
Sbjct: 366 AGHLDAAMKVFQ--EMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGK 423
Query: 478 KICKEL 483
CK L
Sbjct: 424 DECKPL 429
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 136/319 (42%), Gaps = 35/319 (10%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
F D TFN+L+ C G L+ A+ + + + + YS LI ++ A
Sbjct: 349 FAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAE 408
Query: 66 SLYGRMIKGGIL-------PDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCY 118
+L+ + + +L P Y M L G+ +A K+F ++++RG+ D Y
Sbjct: 409 TLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGV-QDPPSY 467
Query: 119 NAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEK 178
+I G C G+ A L V + + + D T+ +LI + K G A + +M +
Sbjct: 468 KTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLR 527
Query: 179 LGCFPSAVTFNALINGLCKAGKLDEA-----------------------HLLFYKMEIGK 215
P A TF++++ L K +E+ LLF + K
Sbjct: 528 SSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEK 587
Query: 216 SPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILI 275
+ L RL + ++ V +++ + ++CE + L+A+ L+ + + DI T N +I
Sbjct: 588 A-FLIVRLLYDNGYL---VKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVI 643
Query: 276 NSFCKAGNMNGAFKLFKDL 294
CK + AF L+ +L
Sbjct: 644 EGLCKHKRHSEAFSLYNEL 662
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 92/241 (38%), Gaps = 32/241 (13%)
Query: 3 MRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYN 62
M+R +D ++ L+ G C++GK + A LL L+ R L Y LIDG K
Sbjct: 457 MKRGVQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEAL 516
Query: 63 EAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAII 122
AH RM++ LP + +L L+ E+ + M+++ + + ++
Sbjct: 517 LAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVV 576
Query: 123 ----------KGF----------------------CDIGQLDHARSLHVEISGHDGLHDT 150
K F C+ +L A +L + + D
Sbjct: 577 RLLFSSAQKEKAFLIVRLLYDNGYLVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDI 636
Query: 151 CTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYK 210
T +I +CK EA ++N++ +LG L N L AGK +E + +
Sbjct: 637 DTCNTVIEGLCKHKRHSEAFSLYNELVELGNHQQLSCHVVLRNALEAAGKWEELQFVSKR 696
Query: 211 M 211
M
Sbjct: 697 M 697
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 129/498 (25%), Positives = 227/498 (45%), Gaps = 35/498 (7%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M + F+ L T++ L+ G K+ ++ + LL+ +E G + ++ I +A +
Sbjct: 214 MILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGK 273
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
NEA+ + RM G PDV+ Y +++ L ++ A ++F +M PD Y
Sbjct: 274 INEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYIT 333
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
++ F D LD + E+ + D T TIL+ +CK G EA + + M G
Sbjct: 334 LLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQG 393
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKME-IGKSPSLFFRL------AQGSDHVS-- 231
P+ T+N LI GL + +LD+A LF ME +G P+ + + + D VS
Sbjct: 394 ILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSAL 453
Query: 232 -------------DSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSF 278
+ V+ + + +AG+ A ++ L D G+VPD TYN+++ +
Sbjct: 454 ETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCY 513
Query: 279 CKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSF 338
K G ++ A KL ++ G PD + +LI+ LY+ +R ++A+K+ M + +P+
Sbjct: 514 SKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTV 573
Query: 339 AVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKG-EVERAIRGLLE 397
Y L+ L + KI A L+ ++ + + N L + K EV A++ L
Sbjct: 574 VTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKML-- 631
Query: 398 LDFRFRDFNLAP----YSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLC 453
F+ D P Y+ ++ G + +V EA+ F + + T C L+ G+
Sbjct: 632 --FKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCT-LLPGVV 688
Query: 454 AKRNLYDAVVI---FLYS 468
+ DA I FLY+
Sbjct: 689 KASLIEDAYKIITNFLYN 706
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 130/520 (25%), Positives = 233/520 (44%), Gaps = 65/520 (12%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D T+N+++ + K G+++EA+ LL + +G + +SLI+ +KA R +EA ++
Sbjct: 502 DSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMF 561
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
RM + + P V+ Y +L GL G++ EA+++F M+Q+G P+ +N + C
Sbjct: 562 MRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKN 621
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
++ A + ++ + D T+ +I + K G V+EA F+QM+KL +P VT
Sbjct: 622 DEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTL 680
Query: 189 NALINGLCKAGKL---------------DEAHLLFYK-------MEIGKSPSLFF----- 221
L+ G+ KA + D+ LF++ E G ++ F
Sbjct: 681 CTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLV 740
Query: 222 ----------------RLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLT-------- 257
R + ++VS + +L +K L Y LL
Sbjct: 741 ANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADM 800
Query: 258 ---------QLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGT 308
Q+ +G +PD+ TYN L++++ K+G ++ F+L+K++ +++T+
Sbjct: 801 IEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNI 860
Query: 309 LIDGLYRVEREEDAFKIR-DHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKS 367
+I GL + +DA + D M P+ Y L+ L + ++ A L+ E +
Sbjct: 861 VISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLF-EGMLD 919
Query: 368 LPGRDNDSI-NALEEYFMK-GEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDE 425
R N +I N L F K GE + A + +L YS+L+ C +VDE
Sbjct: 920 YGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDE 979
Query: 426 ALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIF 465
L F L E +N + +I+GL L +A+V+F
Sbjct: 980 GLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLF 1019
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 150/304 (49%), Gaps = 17/304 (5%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D+AT+N LL+ + K GK++E L + + ++ +I G KA ++A LY
Sbjct: 819 DVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLY 878
Query: 69 GRMIKG-GILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCD 127
++ P Y ++ GLS GR+ EA ++F M+ G P+ YN +I GF
Sbjct: 879 YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGK 938
Query: 128 IGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVT 187
G+ D A +L + D T+++L+ +C G V E F ++++ G P V
Sbjct: 939 AGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVC 998
Query: 188 FNALINGLCKAGKLDEAHLLFYKMEI--GKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCE 245
+N +INGL K+ +L+EA +LF +M+ G +P L+ + + ++
Sbjct: 999 YNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLY--------------TYNSLILNLGI 1044
Query: 246 AGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVT 305
AG A K+ ++ +G+ P++ T+N LI + +G A+ +++ + G SP++ T
Sbjct: 1045 AGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGT 1104
Query: 306 YGTL 309
Y L
Sbjct: 1105 YEQL 1108
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 155/349 (44%), Gaps = 25/349 (7%)
Query: 21 CKQGKLEEAVSLLRLLERD-GRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKGGILPD 79
CK + A +L +D G +L Y+ LI G +A A ++ ++ G +PD
Sbjct: 760 CKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPD 819
Query: 80 VILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHV 139
V Y +L G++ E +++ EM + +N +I G G +D A L+
Sbjct: 820 VATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYY 879
Query: 140 EI-SGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKA 198
++ S D CT+ LI + K G + EA+++F M GC P+ +N LING KA
Sbjct: 880 DLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKA 939
Query: 199 GKLDEAHLLFYKM-EIGKSPSL---------------------FFRLAQGSDHVSDSVSL 236
G+ D A LF +M + G P L +F+ + S D V
Sbjct: 940 GEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCY 999
Query: 237 QKKVEHMCEAGQTLNAYKLLTQLADS-GVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQ 295
+ + ++ + A L ++ S G+ PD+ TYN LI + AG + A K++ ++Q
Sbjct: 1000 NLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQ 1059
Query: 296 LKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKAL 344
GL P+ T+ LI G + E A+ + M+ P+ Y+ L
Sbjct: 1060 RAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/454 (22%), Positives = 199/454 (43%), Gaps = 31/454 (6%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D+ T+N ++ G K G+++EA+ +++ ++ +L+ G KA +A+ +
Sbjct: 642 DVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVT-LCTLLPGVVKASLIEDAYKII 700
Query: 69 GRMIKG-GILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCY-NAIIKGFC 126
+ P + + ++ + E + AV ++ G+ D II+ C
Sbjct: 701 TNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSC 760
Query: 127 DIGQLDHARSLHVEISGHDGLHDTC-THTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
+ AR+L + + G+ T+ +LI + + M+ AQ++F Q++ GC P
Sbjct: 761 KHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDV 820
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKME-----------------------IGKSPSLFFR 222
T+N L++ K+GK+DE L+ +M + + L++
Sbjct: 821 ATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYD 880
Query: 223 LAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAG 282
L D + + ++ + ++G+ A +L + D G P+ YNILIN F KAG
Sbjct: 881 LMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAG 940
Query: 283 NMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYK 342
+ A LFK + +G+ PD TY L+D L V R ++ + + P Y
Sbjct: 941 EADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYN 1000
Query: 343 ALMTWLCRGKKISLAFSLYLEYLKSLPGRDND--SINAL-EEYFMKGEVERAIRGLLELD 399
++ L + ++ A L+ E +K+ G D + N+L + G VE A + E+
Sbjct: 1001 LIINGLGKSHRLEEALVLFNE-MKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQ 1059
Query: 400 FRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVL 433
+ N+ ++ L+ G+ + K + A ++ +
Sbjct: 1060 RAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1093
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 120/456 (26%), Positives = 217/456 (47%), Gaps = 21/456 (4%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M + + D+ L+ GF + +AV ++ +LE+ G+ + Y++LI+GF K R
Sbjct: 115 MVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQP-DVFAYNALINGFCKMNR 173
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
++A + RM PD + Y IM+ L + G++ A+K+ +++ P Y
Sbjct: 174 IDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTI 233
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I+ G +D A L E+ D T+ +I MCK+GMV A EM +E G
Sbjct: 234 LIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKG 293
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKV 240
C P +++N L+ L GK +E L KM ++ D + V+ +
Sbjct: 294 CEPDVISYNILLRALLNQGKWEEGEKLMTKM-----------FSEKCD--PNVVTYSILI 340
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLS 300
+C G+ A LL + + G+ PD +Y+ LI +FC+ G ++ A + + + G
Sbjct: 341 TTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCL 400
Query: 301 PDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWL-CRGKKISLAFS 359
PD V Y T++ L + + + A +I + + C P+ + Y + + L G KI A
Sbjct: 401 PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR-ALH 459
Query: 360 LYLEYLKSLPGRDNDSINALEEYFMK-GEVERAIRGLLELDFRFRDF--NLAPYSILLIG 416
+ LE + + D + N++ + G V+ A L +D R +F ++ Y+I+L+G
Sbjct: 460 MILEMMSNGIDPDEITYNSMISCLCREGMVDEAFE--LLVDMRSCEFHPSVVTYNIVLLG 517
Query: 417 FCQAKKVDEALIIFSVLDEFNININPTSCVHLISGL 452
FC+A ++++A+ + + N T+ LI G+
Sbjct: 518 FCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 158/327 (48%), Gaps = 19/327 (5%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R + D+ T+N ++ G CK+G ++ A ++R LE G + Y+ L+ +
Sbjct: 254 MLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGK 313
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+ E L +M P+V+ Y+I++ L +G++ EA+ + M ++GL PDA+ Y+
Sbjct: 314 WEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDP 373
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I FC G+LD A + L D + ++ +CK G +A E+F ++ ++G
Sbjct: 374 LIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 433
Query: 181 CFPSAVTFNALINGLCKAG-KLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKK 239
C P++ ++N + + L +G K+ H++ M G P D ++
Sbjct: 434 CSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDP--------------DEITYNSM 479
Query: 240 VEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGL 299
+ +C G A++LL + P + TYNI++ FCKA + A + + + G
Sbjct: 480 ISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGC 539
Query: 300 SPDSVTYGTLIDGL----YRVEREEDA 322
P+ TY LI+G+ YR E E A
Sbjct: 540 RPNETTYTVLIEGIGFAGYRAEAMELA 566
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/449 (25%), Positives = 203/449 (45%), Gaps = 21/449 (4%)
Query: 21 CKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKGGILPDV 80
C+ G E++ LL + R G + + LI GFF R +A + + K G PDV
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 81 ILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVE 140
Y ++ G R+ +A ++ M + PD YN +I C G+LD A + +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 141 ISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGK 200
+ + T+TILI +G V EA ++ ++M G P T+N +I G+CK G
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 201 LDEAHLLFYKMEI-GKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQL 259
+D A + +E+ G P D +S + + G+ KL+T++
Sbjct: 279 VDRAFEMVRNLELKGCEP--------------DVISYNILLRALLNQGKWEEGEKLMTKM 324
Query: 260 ADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVERE 319
P++ TY+ILI + C+ G + A L K ++ KGL+PD+ +Y LI R R
Sbjct: 325 FSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRL 384
Query: 320 EDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINAL 379
+ A + + M+ C P Y ++ LC+ K A ++ + + ++ S N +
Sbjct: 385 DVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTM 444
Query: 380 -EEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNI 438
+ G+ RA+ +LE+ D + Y+ ++ C+ VDEA + ++D +
Sbjct: 445 FSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFEL--LVDMRSC 502
Query: 439 NINPTSCVH--LISGLCAKRNLYDAVVIF 465
+P+ + ++ G C + DA+ +
Sbjct: 503 EFHPSVVTYNIVLLGFCKAHRIEDAINVL 531
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/430 (22%), Positives = 163/430 (37%), Gaps = 84/430 (19%)
Query: 94 GRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTH 153
G E++ + M+++G PD +IKGF + + A
Sbjct: 103 GNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVR----------------- 145
Query: 154 TILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEI 213
V E E F Q P +NALING CK ++D+A + +M
Sbjct: 146 ------------VMEILEKFGQ-------PDVFAYNALINGFCKMNRIDDATRVLDRM-- 184
Query: 214 GKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNI 273
+ D D+V+ + +C G+ A K+L QL P + TY I
Sbjct: 185 -----------RSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTI 233
Query: 274 LINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHV 333
LI + G ++ A KL ++ +GL PD TY T+I G+ + + AF++ ++
Sbjct: 234 LIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKG 293
Query: 334 CEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEVERAIR 393
CEP Y L+ L +G+ E +
Sbjct: 294 CEPDVISYNILLRAL----------------------------------LNQGKWEEGEK 319
Query: 394 GLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLC 453
+ ++ D N+ YSIL+ C+ K++EA+ + ++ E + + S LI+ C
Sbjct: 320 LMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 379
Query: 454 AKRNLYDAVVIFLYSLDKGFELGPKICKELLECLLVSQDKRKYAIDLIGRMKSRGYRLHK 513
+ L D + FL ++ L + + L K A+++ G++ G +
Sbjct: 380 REGRL-DVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNS 438
Query: 514 YQYRQTISLL 523
Y S L
Sbjct: 439 SSYNTMFSAL 448
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 80/171 (46%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D+ +N +L CK GK ++A+ + L G S Y+++ + + A +
Sbjct: 402 DIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMI 461
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
M+ GI PD I Y M+ L EG V EA ++ +M P YN ++ GFC
Sbjct: 462 LEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKA 521
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKL 179
+++ A ++ + G+ + T+T+LI + G EA E+ N + ++
Sbjct: 522 HRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRI 572
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 134/537 (24%), Positives = 232/537 (43%), Gaps = 73/537 (13%)
Query: 12 TFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRM 71
T++ +++G C+Q KLE+AV LR E G + ++S++ G+ K + A S + +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 72 IKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQL 131
+K G++P V + I++ GL G + EA+++ ++M + G+ PD+ YN + KGF +G +
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 132 DHARSLHVEISGHDGLHDTCTHTILIC--------------------------------- 158
A + ++ D T+TIL+C
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 368
Query: 159 ---EMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM---- 211
+CK G + EA +FNQM+ G P V ++ +I+GLCK GK D A L+ +M
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428
Query: 212 ---EIGKSPSLFFRLAQ---------------GSDHVSDSVSLQKKVEHMCEAGQTLNAY 253
+L L Q S D V ++ ++G A
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEAL 488
Query: 254 KLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGL 313
+L + ++G+ P + T+N LI +CK N+ A K+ ++L GL+P V+Y TL+D
Sbjct: 489 ELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAY 548
Query: 314 YRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYL-------- 365
+ ++R M P+ Y + LCRG K + E +
Sbjct: 549 ANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGL 608
Query: 366 -----KSLPGRDNDSINALEEYFMKGEVERAIRGLLE-LDFRFRDFNLAPYSILLIGFCQ 419
+ +P D + N + +Y + + LE + R D + A Y+IL+ C
Sbjct: 609 RDMESEGIPP-DQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCV 667
Query: 420 AKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELG 476
+ +A L E N++++ + LI C K + AV +F L +GF +
Sbjct: 668 YGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVS 724
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 201/428 (46%), Gaps = 33/428 (7%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGY---SSLIDGFFKARRYNEAH 65
D+ T+ +LL G C+ G ++ + LL+ + RG L+ S ++ G K R +EA
Sbjct: 326 DVITYTILLCGQCQLGNIDMGLVLLK--DMLSRGFELNSIIPCSVMLSGLCKTGRIDEAL 383
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
SL+ +M G+ PD++ Y+I++ GL G+ A+ ++ EM + +LP++ + A++ G
Sbjct: 384 SLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGL 443
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
C G L ARSL + D + I+I K G + EA E+F + + G PS
Sbjct: 444 CQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSV 503
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKMEI-GKSPSLFFRLAQGSDHVSDSVSLQKKVEHMC 244
TFN+LI G CK + EA + +++ G +PS+ VS ++
Sbjct: 504 ATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSV--------------VSYTTLMDAYA 549
Query: 245 EAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAG---NMNGAFKL---------FK 292
G T + +L ++ G+ P TY+++ C+ N N + +
Sbjct: 550 NCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLR 609
Query: 293 DLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGK 352
D++ +G+ PD +TY T+I L RV+ AF + M + S A Y L+ LC
Sbjct: 610 DMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYG 669
Query: 353 KISLAFS-LYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYS 411
I A S +Y +++ ++ + +KG+ E A++ +L R + ++ YS
Sbjct: 670 YIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYS 729
Query: 412 ILLIGFCQ 419
++ C+
Sbjct: 730 AVINRLCR 737
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 160/369 (43%), Gaps = 19/369 (5%)
Query: 114 DAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMF 173
+ H Y+ ++ G C +L+ A D + ++ CK G V A+ F
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 174 NQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSD 232
+ K G PS + N LINGLC G + EA L M + G P D
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEP--------------D 291
Query: 233 SVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFK 292
SV+ + G A++++ + D G+ PD+ TY IL+ C+ GN++ L K
Sbjct: 292 SVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLK 351
Query: 293 DLQLKGLSPDSVTY-GTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRG 351
D+ +G +S+ ++ GL + R ++A + + M P Y ++ LC+
Sbjct: 352 DMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKL 411
Query: 352 KKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLE-LDFRFRDFNLAPY 410
K +A LY E ++ + AL + + R LL+ L ++ Y
Sbjct: 412 GKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLY 471
Query: 411 SILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLD 470
+I++ G+ ++ ++EAL +F V+ E I + + LI G C +N+ +A I +
Sbjct: 472 NIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL--DVI 529
Query: 471 KGFELGPKI 479
K + L P +
Sbjct: 530 KLYGLAPSV 538
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 134/332 (40%), Gaps = 41/332 (12%)
Query: 4 RRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNE 63
+R + T LL G C++G L EA SLL L G + + Y+ +IDG+ K+ E
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486
Query: 64 AHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIK 123
A L+ +I+ GI P V + ++ G + EA K+ + GL P Y ++
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546
Query: 124 GFCDIGQLDHARSLHVEISGH-------------DGL-----HDTCTHTI--LICEMCKK 163
+ + G L E+ GL H+ C H + I E CK+
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQ 606
Query: 164 GMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRL 223
G+ ME G P +T+N +I LC+ L A F +EI KS +L
Sbjct: 607 GL--------RDMESEGIPPDQITYNTIIQYLCRVKHLSGA---FVFLEIMKSRNL---- 651
Query: 224 AQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGN 283
+ S + ++ +C G A + L + V Y LI + C G+
Sbjct: 652 ------DASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGD 705
Query: 284 MNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYR 315
A KLF L +G + Y +I+ L R
Sbjct: 706 PEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 737
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 128/304 (42%), Gaps = 55/304 (18%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D+ +N++++G+ K G +EEA+ L +++ G ++ ++SLI G+ K + EA +
Sbjct: 467 DIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL 526
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
+ G+ P V+ Y ++ +N G ++ EM G+ P Y+ I KG C
Sbjct: 527 DVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRG 586
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTIL--ICEMCKKGMVREAQEMFNQMEKLGCFPSAV 186
+ H+ C H + I E CK+G+ ME G P +
Sbjct: 587 WK-----------------HENCNHVLRERIFEKCKQGL--------RDMESEGIPPDQI 621
Query: 187 TFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQ-----------GSDHVSDSV- 234
T+N +I LC+ L A F +EI KS +L A G +DS
Sbjct: 622 TYNTIIQYLCRVKHLSGA---FVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFI 678
Query: 235 -SLQKK------------VEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKA 281
SLQ++ ++ C G A KL QL G I+ Y+ +IN C+
Sbjct: 679 YSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRR 738
Query: 282 GNMN 285
MN
Sbjct: 739 HLMN 742
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 113/259 (43%), Gaps = 16/259 (6%)
Query: 255 LLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLY 314
+L ++ D + ++YN ++ F + M +K KD + TY T++DGL
Sbjct: 146 ILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKD-------KNEHTYSTVVDGLC 198
Query: 315 RVEREEDA-FKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKS--LPG- 370
R ++ EDA +R K + PS + ++M+ C+ + +A S + LK +P
Sbjct: 199 RQQKLEDAVLFLRTSEWKDI-GPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSV 257
Query: 371 -RDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALII 429
N IN L + G + A+ +++ + + Y+IL GF + A +
Sbjct: 258 YSHNILINGL---CLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEV 314
Query: 430 FSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKELLECLLV 489
+ + ++ + + L+ G C N+ +V+ L +GFEL I ++ L
Sbjct: 315 IRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLC 374
Query: 490 SQDKRKYAIDLIGRMKSRG 508
+ A+ L +MK+ G
Sbjct: 375 KTGRIDEALSLFNQMKADG 393
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 134/537 (24%), Positives = 232/537 (43%), Gaps = 73/537 (13%)
Query: 12 TFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRM 71
T++ +++G C+Q KLE+AV LR E G + ++S++ G+ K + A S + +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 72 IKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQL 131
+K G++P V + I++ GL G + EA+++ ++M + G+ PD+ YN + KGF +G +
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 132 DHARSLHVEISGHDGLHDTCTHTILIC--------------------------------- 158
A + ++ D T+TIL+C
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSV 368
Query: 159 ---EMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM---- 211
+CK G + EA +FNQM+ G P V ++ +I+GLCK GK D A L+ +M
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKR 428
Query: 212 ---EIGKSPSLFFRLAQ---------------GSDHVSDSVSLQKKVEHMCEAGQTLNAY 253
+L L Q S D V ++ ++G A
Sbjct: 429 ILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEAL 488
Query: 254 KLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGL 313
+L + ++G+ P + T+N LI +CK N+ A K+ ++L GL+P V+Y TL+D
Sbjct: 489 ELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAY 548
Query: 314 YRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYL-------- 365
+ ++R M P+ Y + LCRG K + E +
Sbjct: 549 ANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGL 608
Query: 366 -----KSLPGRDNDSINALEEYFMKGEVERAIRGLLE-LDFRFRDFNLAPYSILLIGFCQ 419
+ +P D + N + +Y + + LE + R D + A Y+IL+ C
Sbjct: 609 RDMESEGIPP-DQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCV 667
Query: 420 AKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELG 476
+ +A L E N++++ + LI C K + AV +F L +GF +
Sbjct: 668 YGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVS 724
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 201/428 (46%), Gaps = 33/428 (7%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGY---SSLIDGFFKARRYNEAH 65
D+ T+ +LL G C+ G ++ + LL+ + RG L+ S ++ G K R +EA
Sbjct: 326 DVITYTILLCGQCQLGNIDMGLVLLK--DMLSRGFELNSIIPCSVMLSGLCKTGRIDEAL 383
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
SL+ +M G+ PD++ Y+I++ GL G+ A+ ++ EM + +LP++ + A++ G
Sbjct: 384 SLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGL 443
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
C G L ARSL + D + I+I K G + EA E+F + + G PS
Sbjct: 444 CQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSV 503
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKMEI-GKSPSLFFRLAQGSDHVSDSVSLQKKVEHMC 244
TFN+LI G CK + EA + +++ G +PS+ VS ++
Sbjct: 504 ATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSV--------------VSYTTLMDAYA 549
Query: 245 EAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAG---NMNGAFKL---------FK 292
G T + +L ++ G+ P TY+++ C+ N N + +
Sbjct: 550 NCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLR 609
Query: 293 DLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGK 352
D++ +G+ PD +TY T+I L RV+ AF + M + S A Y L+ LC
Sbjct: 610 DMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYG 669
Query: 353 KISLAFS-LYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYS 411
I A S +Y +++ ++ + +KG+ E A++ +L R + ++ YS
Sbjct: 670 YIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYS 729
Query: 412 ILLIGFCQ 419
++ C+
Sbjct: 730 AVINRLCR 737
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 161/368 (43%), Gaps = 17/368 (4%)
Query: 114 DAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMF 173
+ H Y+ ++ G C +L+ A D + ++ CK G V A+ F
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 174 NQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDS 233
+ K G PS + N LINGLC G + EA L M G + S +
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMN-----------KHGVEPDSVT 294
Query: 234 VSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKD 293
++ K H+ G A++++ + D G+ PD+ TY IL+ C+ GN++ L KD
Sbjct: 295 YNILAKGFHL--LGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKD 352
Query: 294 LQLKGLSPDSVTY-GTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGK 352
+ +G +S+ ++ GL + R ++A + + M P Y ++ LC+
Sbjct: 353 MLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLG 412
Query: 353 KISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLE-LDFRFRDFNLAPYS 411
K +A LY E ++ + AL + + R LL+ L ++ Y+
Sbjct: 413 KFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYN 472
Query: 412 ILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDK 471
I++ G+ ++ ++EAL +F V+ E I + + LI G C +N+ +A I + K
Sbjct: 473 IVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL--DVIK 530
Query: 472 GFELGPKI 479
+ L P +
Sbjct: 531 LYGLAPSV 538
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 134/332 (40%), Gaps = 41/332 (12%)
Query: 4 RRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNE 63
+R + T LL G C++G L EA SLL L G + + Y+ +IDG+ K+ E
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486
Query: 64 AHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIK 123
A L+ +I+ GI P V + ++ G + EA K+ + GL P Y ++
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546
Query: 124 GFCDIGQLDHARSLHVEISGH-------------DGL-----HDTCTHTI--LICEMCKK 163
+ + G L E+ GL H+ C H + I E CK+
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQ 606
Query: 164 GMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRL 223
G+ ME G P +T+N +I LC+ L A F +EI KS +L
Sbjct: 607 GL--------RDMESEGIPPDQITYNTIIQYLCRVKHLSGA---FVFLEIMKSRNL---- 651
Query: 224 AQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGN 283
+ S + ++ +C G A + L + V Y LI + C G+
Sbjct: 652 ------DASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGD 705
Query: 284 MNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYR 315
A KLF L +G + Y +I+ L R
Sbjct: 706 PEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 737
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 128/304 (42%), Gaps = 55/304 (18%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D+ +N++++G+ K G +EEA+ L +++ G ++ ++SLI G+ K + EA +
Sbjct: 467 DIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL 526
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
+ G+ P V+ Y ++ +N G ++ EM G+ P Y+ I KG C
Sbjct: 527 DVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRG 586
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTIL--ICEMCKKGMVREAQEMFNQMEKLGCFPSAV 186
+ H+ C H + I E CK+G+ ME G P +
Sbjct: 587 WK-----------------HENCNHVLRERIFEKCKQGL--------RDMESEGIPPDQI 621
Query: 187 TFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQ-----------GSDHVSDSV- 234
T+N +I LC+ L A F +EI KS +L A G +DS
Sbjct: 622 TYNTIIQYLCRVKHLSGA---FVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFI 678
Query: 235 -SLQKK------------VEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKA 281
SLQ++ ++ C G A KL QL G I+ Y+ +IN C+
Sbjct: 679 YSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRR 738
Query: 282 GNMN 285
MN
Sbjct: 739 HLMN 742
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 113/259 (43%), Gaps = 16/259 (6%)
Query: 255 LLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLY 314
+L ++ D + ++YN ++ F + M +K KD + TY T++DGL
Sbjct: 146 ILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKD-------KNEHTYSTVVDGLC 198
Query: 315 RVEREEDA-FKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKS--LPG- 370
R ++ EDA +R K + PS + ++M+ C+ + +A S + LK +P
Sbjct: 199 RQQKLEDAVLFLRTSEWKDI-GPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSV 257
Query: 371 -RDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALII 429
N IN L + G + A+ +++ + + Y+IL GF + A +
Sbjct: 258 YSHNILINGL---CLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEV 314
Query: 430 FSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKELLECLLV 489
+ + ++ + + L+ G C N+ +V+ L +GFEL I ++ L
Sbjct: 315 IRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLC 374
Query: 490 SQDKRKYAIDLIGRMKSRG 508
+ A+ L +MK+ G
Sbjct: 375 KTGRIDEALSLFNQMKADG 393
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 175/356 (49%), Gaps = 13/356 (3%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
F+ + TF L+NGFC + EA+SL+ + G + Y+++ID + + N A
Sbjct: 145 FEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTAL 204
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
+ M K GI PDV+ Y ++ L + G G + ++ ++M++ G+ PD ++A+I +
Sbjct: 205 DVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVY 264
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
GQL A+ + E+ + T+ LI +C G++ EA+++ N + G FP+A
Sbjct: 265 GKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNA 324
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCE 245
VT+N LING CKA ++D+ + M G D D+ + + C+
Sbjct: 325 VTYNTLINGYCKAKRVDDGMKILCVMS-----------RDGVD--GDTFTYNTLYQGYCQ 371
Query: 246 AGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVT 305
AG+ A K+L ++ GV PD+ T+NIL++ C G + A +DLQ +T
Sbjct: 372 AGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIIT 431
Query: 306 YGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLY 361
Y +I GL + ++ EDA+ + + P Y +M L R + A LY
Sbjct: 432 YNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELY 487
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 114/447 (25%), Positives = 195/447 (43%), Gaps = 47/447 (10%)
Query: 10 LATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYG 69
+ F+ LL K K E +SL R LE G L +++LID F + R + A S G
Sbjct: 79 IVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLG 138
Query: 70 RMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIG 129
+M+K G P ++ + ++ G + R EA+ + +++ G P+ YN II C+ G
Sbjct: 139 KMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKG 198
Query: 130 QLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFN 189
Q++ A + + D T+ LI + G + + + M ++G P +TF+
Sbjct: 199 QVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFS 258
Query: 190 ALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQT 249
ALI+ K G+L EA + +M I +S + + V+ + +C G
Sbjct: 259 ALIDVYGKEGQLLEAKKQYNEM-IQRSVN------------PNIVTYNSLINGLCIHGLL 305
Query: 250 LNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTL 309
A K+L L G P+ TYN LIN +CKA ++ K+ + G+ D+ TY TL
Sbjct: 306 DEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTL 365
Query: 310 IDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLP 369
G + + A K+ M+ P + L+ LC KI A + LE L+
Sbjct: 366 YQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKAL-VRLEDLQK-- 422
Query: 370 GRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALII 429
+ + G++ Y+I++ G C+A KV++A +
Sbjct: 423 -------------------SKTVVGIIT------------YNIIIKGLCKADKVEDAWYL 451
Query: 430 FSVLDEFNININPTSCVHLISGLCAKR 456
F L ++ + + + ++ GL KR
Sbjct: 452 FCSLALKGVSPDVITYITMMIGLRRKR 478
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 156/332 (46%), Gaps = 49/332 (14%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
++ ++ +N +++ C++G++ A+ +L+ +++ G + Y+SLI F + + +
Sbjct: 180 YEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSA 239
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
+ M++ GI PDVI ++ ++ EG++ EA K + EMIQR + P+ YN++I G
Sbjct: 240 RILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGL 299
Query: 126 CDIGQLDHARSL----------------HVEISGH-------DGLH------------DT 150
C G LD A+ + + I+G+ DG+ DT
Sbjct: 300 CIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDT 359
Query: 151 CTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYK 210
T+ L C+ G A+++ +M G P TFN L++GLC GK+ +A +
Sbjct: 360 FTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLED 419
Query: 211 MEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKT 270
+ Q S V ++ ++ +C+A + +A+ L LA GV PD+ T
Sbjct: 420 L-------------QKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVIT 466
Query: 271 YNILINSFCKAGNMNGAFKLFKDLQLK-GLSP 301
Y ++ + A +L++ +Q + GL P
Sbjct: 467 YITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R ++ T+N L+NG C G L+EA +L +L G Y++LI+G+ KA+R
Sbjct: 280 MIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKR 339
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
++ + M + G+ D Y + +G G+ A K+ M+ G+ PD + +N
Sbjct: 340 VDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNI 399
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
++ G CD G++ A ++ + T+ I+I +CK V +A +F + G
Sbjct: 400 LLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKG 459
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKME 212
P +T+ ++ GL + EAH L+ KM+
Sbjct: 460 VSPDVITYITMMIGLRRKRLWREAHELYRKMQ 491
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/388 (21%), Positives = 146/388 (37%), Gaps = 50/388 (12%)
Query: 130 QLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFN 189
+ + A +L +++ L + L+ + K +F +E LG +F
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 190 ALINGLCKAGKLDEA-HLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQ 248
LI+ C+ +L A L M++G PS+ V+ V C +
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSI--------------VTFGSLVNGFCHVNR 164
Query: 249 TLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGT 308
A L+ Q+ G P++ YN +I+S C+ G +N A + K ++ G+ PD VTY +
Sbjct: 165 FYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNS 224
Query: 309 LIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSL 368
LI L+ + +I M++ P + AL
Sbjct: 225 LITRLFHSGTWGVSARILSDMMRMGISPDVITFSAL------------------------ 260
Query: 369 PGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALI 428
++ Y +G++ A + E+ R + N+ Y+ L+ G C +DEA
Sbjct: 261 ----------IDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKK 310
Query: 429 IFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKELLECLL 488
+ +VL N + LI+G C + + D + I G + G L
Sbjct: 311 VLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVD-GDTFTYNTLYQGY 369
Query: 489 VSQDKRKYAIDLIGRMKSRGYRLHKYQY 516
K A ++GRM S G Y +
Sbjct: 370 CQAGKFSAAEKVLGRMVSCGVHPDMYTF 397
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 167/345 (48%), Gaps = 13/345 (3%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
++ + TF LL+GFC ++ +A SL+ L+ + G + Y++LIDG K N A
Sbjct: 137 YEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIAL 196
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
L M K G+ DV+ Y +L GL GR +A +M +M++R + PD + A+I F
Sbjct: 197 ELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVF 256
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
G LD A+ L+ E+ + T+ +I +C G + +A++ F+ M GCFP+
Sbjct: 257 VKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNV 316
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCE 245
VT+N LI+G CK +DE LF +M +G + +D + + C+
Sbjct: 317 VTYNTLISGFCKFRMVDEGMKLFQRMS-----------CEGFN--ADIFTYNTLIHGYCQ 363
Query: 246 AGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVT 305
G+ A + + V PDI T+ IL++ C G + A F D++ V
Sbjct: 364 VGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVA 423
Query: 306 YGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCR 350
Y +I GL + ++ E A+++ + +P Y ++ LC+
Sbjct: 424 YNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCK 468
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/444 (25%), Positives = 188/444 (42%), Gaps = 47/444 (10%)
Query: 10 LATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYG 69
+ F LL + E + + +E G L ++ LI F + R + A S+ G
Sbjct: 71 IVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLG 130
Query: 70 RMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIG 129
+M+K G P ++ + +L G R+G+A + M++ G P+ YN +I G C G
Sbjct: 131 KMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNG 190
Query: 130 QLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFN 189
+L+ A L E+ D T+ L+ +C G +A M M K P VTF
Sbjct: 191 ELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFT 250
Query: 190 ALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQT 249
ALI+ K G LDEA L+ +M + D ++V+ + +C G+
Sbjct: 251 ALIDVFVKQGNLDEAQELYKEM-----------IQSSVD--PNNVTYNSIINGLCMHGRL 297
Query: 250 LNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTL 309
+A K +A G P++ TYN LI+ FCK ++ KLF+ + +G + D TY TL
Sbjct: 298 YDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTL 357
Query: 310 IDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLP 369
I G +V + A I M+ P + L+ LC
Sbjct: 358 IHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLC-------------------- 397
Query: 370 GRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALII 429
+ GE+E A+ ++ + + Y+I++ G C+A KV++A +
Sbjct: 398 --------------VNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWEL 443
Query: 430 FSVLDEFNININPTSCVHLISGLC 453
F L + + + +I GLC
Sbjct: 444 FCRLPVEGVKPDARTYTIMILGLC 467
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 171/353 (48%), Gaps = 13/353 (3%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
DL +F +L++ FC+ +L A+S+L + + G + + SL+ GF R +A SL
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
M+K G P+V++Y ++ GL G + A+++ EM ++GL D YN ++ G C
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
G+ A + ++ D T T LI K+G + EAQE++ +M + P+ VT+
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 189 NALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQ 248
N++INGLC G+L +A F ++ S F + V+ + C+
Sbjct: 285 NSIINGLCMHGRLYDAKKTF---DLMASKGCF----------PNVVTYNTLISGFCKFRM 331
Query: 249 TLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGT 308
KL +++ G DI TYN LI+ +C+ G + A +F + + ++PD +T+
Sbjct: 332 VDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCI 391
Query: 309 LIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLY 361
L+ GL E A D M + Y ++ LC+ K+ A+ L+
Sbjct: 392 LLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELF 444
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 154/317 (48%), Gaps = 24/317 (7%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
++ ++ +N L++G CK G+L A+ LL +E+ G G + Y++L+ G + R+++A
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
+ M+K I PDV+ + ++ +G + EA +++ EMIQ + P+ YN+II G
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
C G+L A+ ++ + T+ LI CK MV E ++F +M G
Sbjct: 292 CMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADI 351
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKM-----------------------EIGKSPSLFFR 222
T+N LI+G C+ GKL A +F M EI + F
Sbjct: 352 FTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDD 411
Query: 223 LAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAG 282
+ + ++ V+ + +C+A + A++L +L GV PD +TY I+I CK G
Sbjct: 412 MRESEKYIG-IVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNG 470
Query: 283 NMNGAFKLFKDLQLKGL 299
A +L + ++ +G+
Sbjct: 471 PRREADELIRRMKEEGI 487
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 124/490 (25%), Positives = 223/490 (45%), Gaps = 42/490 (8%)
Query: 54 GFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLP 113
GF + R+ +A +L+ M+ LP ++ + +L +N R + +M G+
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104
Query: 114 DAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMF 173
D + + +I FC +L A S+ ++ T L+ C + +A +
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 174 NQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDS 233
M K G P+ V +N LI+GLCK G+L+ A L +ME + G+D V+ +
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEME---------KKGLGADVVTYN 215
Query: 234 VSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKD 293
L +C +G+ +A ++L + + PD+ T+ LI+ F K GN++ A +L+K+
Sbjct: 216 TLLTG----LCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKE 271
Query: 294 LQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKK 353
+ + P++VTY ++I+GL R DA K D M C P+ Y L++ C+ +
Sbjct: 272 MIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRM 331
Query: 354 ISLAFSLYLEYLKSLPGRDND--SINAL-EEYFMKGEVERAIRGLLELDFRFRDFNLAPY 410
+ L+ S G + D + N L Y G++ A+ + R ++ +
Sbjct: 332 VDEGMKLFQRM--SCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITH 389
Query: 411 SILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLD 470
ILL G C +++ AL+ F + E I + +I GLC ++
Sbjct: 390 CILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKAD-----------KVE 438
Query: 471 KGFELGPKICKELLECLLVSQDKRKYAIDLIGRMKSRGYRLHKYQYRQTISLLQQL-QEG 529
K +EL C+ +E V D R Y I ++G K+ G R R+ L++++ +EG
Sbjct: 439 KAWEL---FCRLPVEG--VKPDARTYTIMILGLCKN-GPR------READELIRRMKEEG 486
Query: 530 KAVKLFSEDN 539
++ +ED+
Sbjct: 487 IICQMNAEDD 496
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 2/113 (1%)
Query: 2 WM--RRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKAR 59
WM RR D+ T +LL+G C G++E A+ + + I + Y+ +I G KA
Sbjct: 376 WMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKAD 435
Query: 60 RYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLL 112
+ +A L+ R+ G+ PD Y IM+ GL G EA ++ M + G++
Sbjct: 436 KVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGII 488
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 115/470 (24%), Positives = 221/470 (47%), Gaps = 19/470 (4%)
Query: 13 FNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMI 72
+ V++N + + L ++S + +G + ++ L+ + +N+ S +
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN- 155
Query: 73 KGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLD 132
K ++ DV + I+++G G + ++ + E+ + G P+ Y +I G C G+++
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 133 HARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALI 192
A+ L E+ + + T+T+LI + K G+ ++ EM+ +M++ G FP+ T+N ++
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 193 NGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLN 251
N LCK G+ +A +F +M E G S ++ V+ + +C +
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNI--------------VTYNTLIGGLCREMKLNE 321
Query: 252 AYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLID 311
A K++ Q+ G+ P++ TYN LI+ FC G + A L +DL+ +GLSP VTY L+
Sbjct: 322 ANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVS 381
Query: 312 GLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYL--EYLKSLP 369
G R A K+ M + +PS Y L+ R + A L L E L +P
Sbjct: 382 GFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVP 441
Query: 370 GRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALII 429
S+ + + +KG++ A R + + + N Y+ +++G+C+ AL +
Sbjct: 442 DVHTYSV-LIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKL 500
Query: 430 FSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKI 479
++E + N S ++I LC +R +A + +D G + I
Sbjct: 501 LKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSI 550
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 209/445 (46%), Gaps = 54/445 (12%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D+ +F +L+ G C+ G++E++ LL L G + Y++LIDG K +A L+
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
M K G++ + Y +++ GL G + +M+ +M + G+ P+ + YN ++ C
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
G+ A + E+ + T+ LI +C++ + EA ++ +QM+ G P+ +T+
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341
Query: 189 NALINGLCKAGKLDEAHLLFYKMEI-GKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAG 247
N LI+G C GKL +A L ++ G SPSL V+ V C G
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSL--------------VTYNILVSGFCRKG 387
Query: 248 QTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYG 307
T A K++ ++ + G+ P TY ILI++F ++ NM A +L ++ GL PD TY
Sbjct: 388 DTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYS 447
Query: 308 TLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKS 367
LI G + +A ++ M++ CEP+ +Y ++ C+
Sbjct: 448 VLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCK----------------- 490
Query: 368 LPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEA- 426
+G RA++ L E++ + N+A Y ++ C+ +K EA
Sbjct: 491 -----------------EGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAE 533
Query: 427 LIIFSVLDEFNININP-TSCVHLIS 450
++ ++D I+P TS + LIS
Sbjct: 534 RLVEKMIDS---GIDPSTSILSLIS 555
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/469 (24%), Positives = 209/469 (44%), Gaps = 63/469 (13%)
Query: 82 LYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYN---------------------- 119
LY +++ + ++ F EM+ G +P ++C+N
Sbjct: 96 LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN 155
Query: 120 ------------AIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVR 167
+IKG C+ G+++ + L +E++ + +T LI CKKG +
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 168 EAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQG 226
+A+++F +M KLG + T+ LINGL K G + ++ KM E G P+L+
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLY------ 269
Query: 227 SDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNG 286
+ + +C+ G+T +A+++ ++ + GV +I TYN LI C+ +N
Sbjct: 270 --------TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNE 321
Query: 287 AFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMT 346
A K+ ++ G++P+ +TY TLIDG V + A + + PS Y L++
Sbjct: 322 ANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVS 381
Query: 347 WLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGE-VERAIRGLLELDFRFRDF 405
CR S A + E + + L + F + + +E+AI +L +
Sbjct: 382 GFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAI----QLRLSMEEL 437
Query: 406 NLAP----YSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDA 461
L P YS+L+ GFC +++EA +F + E N N +I G C + + Y A
Sbjct: 438 GLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRA 497
Query: 462 VVIFLYSLDKGFELGPKIC--KELLECLLVSQDKRKYAIDLIGRMKSRG 508
+ + +K EL P + + ++E +L + K K A L+ +M G
Sbjct: 498 LKLLKEMEEK--ELAPNVASYRYMIE-VLCKERKSKEAERLVEKMIDSG 543
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 98/184 (53%), Gaps = 4/184 (2%)
Query: 4 RRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLS--GYSSLIDGFFKARRY 61
R L T+N+L++GFC++G A +++ +E RGI+ S Y+ LID F ++
Sbjct: 367 RGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE--RGIKPSKVTYTILIDTFARSDNM 424
Query: 62 NEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAI 121
+A L M + G++PDV Y++++ G +G++ EA ++F M+++ P+ YN +
Sbjct: 425 EKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTM 484
Query: 122 IKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGC 181
I G+C G A L E+ + + ++ +I +CK+ +EA+ + +M G
Sbjct: 485 ILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGI 544
Query: 182 FPSA 185
PS
Sbjct: 545 DPST 548
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/468 (26%), Positives = 210/468 (44%), Gaps = 18/468 (3%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R+ D+ATFN+L+N C +G E++ L++ +E+ G + Y++++ + K R
Sbjct: 224 MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 283
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+ A L M G+ DV Y +++ L R+ + + +M +R + P+ YN
Sbjct: 284 FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNT 343
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I GF + G++ A L E+ + T LI +G +EA +MF ME G
Sbjct: 344 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 403
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKV 240
PS V++ L++GLCK + D A + +M + + ++ +
Sbjct: 404 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRM-------------KRNGVCVGRITYTGMI 450
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLS 300
+ +C+ G A LL +++ G+ PDI TY+ LIN FCK G A ++ + GLS
Sbjct: 451 DGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLS 510
Query: 301 PDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLA--F 358
P+ + Y TLI R+ ++A +I + M+ + L+T LC+ K++ A F
Sbjct: 511 PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEF 570
Query: 359 SLYLEYLKSLPGRDNDSINAL-EEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGF 417
+ LP + S + L Y GE +A E+ Y LL G
Sbjct: 571 MRCMTSDGILP--NTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGL 628
Query: 418 CQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIF 465
C+ + EA L ++ L++ +C NL AV +F
Sbjct: 629 CKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLF 676
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/525 (23%), Positives = 224/525 (42%), Gaps = 52/525 (9%)
Query: 12 TFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRM 71
T+ +++G CK G L+EAV LL + +DG + YS+LI+GF K R+ A + R+
Sbjct: 445 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 504
Query: 72 IKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQL 131
+ G+ P+ I+Y+ ++ G + EA++++ MI G D +N ++ C G++
Sbjct: 505 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 564
Query: 132 DHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNAL 191
A ++ L +T + LI G +A +F++M K+G P+ T+ +L
Sbjct: 565 AEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSL 624
Query: 192 INGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLN 251
+ GLCK G L EA F + D+V + MC++G
Sbjct: 625 LKGLCKGGHLREAE-------------KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAK 671
Query: 252 AYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKG-LSPDSVTYGTLI 310
A L ++ ++PD TY LI+ C+ G A K+ + +G + P+ V Y +
Sbjct: 672 AVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFV 731
Query: 311 DGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPG 370
DG+++ + + R+ M P A+
Sbjct: 732 DGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM-------------------------- 765
Query: 371 RDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIF 430
++ Y G++E+ L E+ + NL Y+ILL G+ + K V + +++
Sbjct: 766 --------IDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLY 817
Query: 431 SVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKELLECLLVS 490
+ I + +C L+ G+C L + I + +G E+ + +L +
Sbjct: 818 RSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEV-DRYTFNMLISKCCA 876
Query: 491 QDKRKYAIDLIGRMKSRGYRLHKYQYRQTISLL---QQLQEGKAV 532
+ +A DL+ M S G L K +S+L + QE + V
Sbjct: 877 NGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMV 921
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 143/571 (25%), Positives = 236/571 (41%), Gaps = 65/571 (11%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M + RD TFNVL+ CK GK+ EA +R + DG + LI+G+ +
Sbjct: 539 MILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGE 598
Query: 61 YNEAHSLYGRMIKGGILP-----------------------------------DVILYAI 85
+A S++ M K G P D ++Y
Sbjct: 599 GLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNT 658
Query: 86 MLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGH- 144
+L + G + +AV +F EM+QR +LPD++ Y ++I G C G+ A E
Sbjct: 659 LLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARG 718
Query: 145 DGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEA 204
+ L + +T + M K G + QM+ LG P VT NA+I+G + GK+++
Sbjct: 719 NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKT 778
Query: 205 HLLFYKM---EIGKSPSLFFRLAQGSDH-------------------VSDSVSLQKKVEH 242
+ L +M G + + + L G + D ++ V
Sbjct: 779 NDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLG 838
Query: 243 MCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPD 302
+CE+ K+L GV D T+N+LI+ C G +N AF L K + G+S D
Sbjct: 839 ICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLD 898
Query: 303 SVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYL 362
T ++ L R R +++ + M K P Y L+ LCR I AF +
Sbjct: 899 KDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKE 958
Query: 363 EYL--KSLPGRDNDS--INALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFC 418
E + K P +S + AL + E +R +L++ +A ++ L+ C
Sbjct: 959 EMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVP---TIASFTTLMHLCC 1015
Query: 419 QAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPK 478
+ V EAL + V+ + ++ S LI+GLCAK ++ A ++ GF
Sbjct: 1016 KNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANAT 1075
Query: 479 ICKELLECLLVSQDKRKYAIDLIGRMKSRGY 509
K L+ LL + A ++ + +RG+
Sbjct: 1076 TYKALIRGLLARETAFSGADIILKDLLARGF 1106
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 179/391 (45%), Gaps = 37/391 (9%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D+ T N +++G+ + GK+E+ LL + G L+ Y+ L+ G+ K + + + LY
Sbjct: 758 DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLY 817
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
+I GILPD + ++ G+ + +K+ I RG+ D + +N +I C
Sbjct: 818 RSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCAN 877
Query: 129 GQLDHARSLHVEISGHDGLH---DTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
G+++ A L V++ G+ DTC + + + + +E++ + ++M K G P +
Sbjct: 878 GEINWAFDL-VKVMTSLGISLDKDTCDAMVSV--LNRNHRFQESRMVLHEMSKQGISPES 934
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKM--------------------EIGKS--PSLFFRL 223
+ LINGLC+ G + A ++ +M + GK+ +L R
Sbjct: 935 RKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRF 994
Query: 224 AQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGN 283
V S + C+ G + A +L +++ G+ D+ +YN+LI C G+
Sbjct: 995 MLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGD 1054
Query: 284 MNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKA 343
M AF+L+++++ G ++ TY LI GL E AF D +LK + F +
Sbjct: 1055 MALAFELYEEMKGDGFLANATTYKALIRGLL---ARETAFSGADIILKDLLARGFITSMS 1111
Query: 344 LMTWLCRGKKISLAFSLYLEYLKSLPGRDND 374
L R K++ +E LK+L D
Sbjct: 1112 LSQDSHRNLKMA------MEKLKALQSNKKD 1136
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 126/307 (41%), Gaps = 57/307 (18%)
Query: 152 THTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM 211
+ ILI ++GM++++ E+F M G PS T NA++ + K+
Sbjct: 165 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKS------------- 211
Query: 212 EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTY 271
G+ ++ + L ++ + PD+ T+
Sbjct: 212 -----------------------------------GEDVSVWSFLKEMLKRKICPDVATF 236
Query: 272 NILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLK 331
NILIN C G+ + L + ++ G +P VTY T++ + R + A ++ DHM
Sbjct: 237 NILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKS 296
Query: 332 HVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFM-KGEVER 390
+ Y L+ LCR +I+ + L + K + + + N L F +G+V
Sbjct: 297 KGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLI 356
Query: 391 AIRGLLELDFRFRDFNLAP----YSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCV 446
A + L E+ F L+P ++ L+ G EAL +F +++ + + S
Sbjct: 357 ASQLLNEM----LSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYG 412
Query: 447 HLISGLC 453
L+ GLC
Sbjct: 413 VLLDGLC 419
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 175/355 (49%), Gaps = 18/355 (5%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
++ TF L++G+CK G LE AVSL + + R + + Y++LIDGF K A +Y
Sbjct: 197 NVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMY 256
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
RM++ + P+ ++Y ++ G G A+K A+M+ +G+ D Y II G C
Sbjct: 257 SRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGN 316
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
G+L A + ++ D + D T ++ K G ++ A M++++ + G P V
Sbjct: 317 GKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVAL 376
Query: 189 NALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQ 248
+ +I+G+ K G+L EA ++F + + +D V ++ +C+ G
Sbjct: 377 STMIDGIAKNGQLHEA-------------IVYFCIEKAND-----VMYTVLIDALCKEGD 418
Query: 249 TLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGT 308
+ +L ++++++G+VPD Y I CK GN+ AFKL + +GL D + Y T
Sbjct: 419 FIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTT 478
Query: 309 LIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLE 363
LI GL +A ++ D ML P AV+ L+ + ++ A L L+
Sbjct: 479 LIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLD 533
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 142/295 (48%), Gaps = 18/295 (6%)
Query: 5 RFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEA 64
R + + + +++GF ++G + A+ L + G + ++ Y +I G + EA
Sbjct: 263 RVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEA 322
Query: 65 HSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKG 124
+ M K ++PD++++ M+ GR+ AV M+ ++I+RG PD + +I G
Sbjct: 323 TEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDG 382
Query: 125 FCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPS 184
GQL A +D + +T+LI +CK+G E + +F+++ + G P
Sbjct: 383 IAKNGQLHEAIVYFCIEKANDVM-----YTVLIDALCKEGDFIEVERLFSKISEAGLVPD 437
Query: 185 AVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMC 244
+ + I GLCK G L +A L +M + +G + D ++ + +
Sbjct: 438 KFMYTSWIAGLCKQGNLVDAFKLKTRM-----------VQEG--LLLDLLAYTTLIYGLA 484
Query: 245 EAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGL 299
G + A ++ ++ +SG+ PD +++LI ++ K GNM A L D+Q +GL
Sbjct: 485 SKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGL 539
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 154/350 (44%), Gaps = 52/350 (14%)
Query: 4 RRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLID---------- 53
R + ++FN +++ CK G+++ A ++ + R G + Y+SLID
Sbjct: 50 RGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRS 109
Query: 54 ----------------------------GFFKARRYNEAHSLYGRMIKGGILPDVILYAI 85
GF K + +E G M+K P+V+ Y+
Sbjct: 110 ASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLK-CCSPNVVTYST 168
Query: 86 MLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHD 145
+ G + A+K F M + L P+ + +I G+C G L+ A SL+ E+
Sbjct: 169 WIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVR 228
Query: 146 GLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAH 205
+ T+T LI CKKG ++ A+EM+++M + P+++ + +I+G + G D A
Sbjct: 229 MSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAM 288
Query: 206 LLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVV 265
KM L QG D + + +C G+ A +++ + S +V
Sbjct: 289 KFLAKM-----------LNQGMRL--DITAYGVIISGLCGNGKLKEATEIVEDMEKSDLV 335
Query: 266 PDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYR 315
PD+ + ++N++ K+G M A ++ L +G PD V T+IDG+ +
Sbjct: 336 PDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAK 385
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 100/426 (23%), Positives = 190/426 (44%), Gaps = 35/426 (8%)
Query: 46 SGYSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAE 105
S ++S++ K + A + M + G PDVI Y ++ G G + A +
Sbjct: 57 SSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLES 116
Query: 106 M-IQRGLL--PDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTC------THTIL 156
+ G + PD +N++ GF + LD E+ + G+ C T++
Sbjct: 117 LRASHGFICKPDIVSFNSLFNGFSKMKMLD-------EVFVYMGVMLKCCSPNVVTYSTW 169
Query: 157 ICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKS 216
I CK G ++ A + F+ M++ P+ VTF LI+G CKAG L+ A L+ +M
Sbjct: 170 IDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEM----- 224
Query: 217 PSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILIN 276
R + S +V V+ ++ C+ G+ A ++ +++ + V P+ Y +I+
Sbjct: 225 -----RRVRMSLNV---VTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIID 276
Query: 277 SFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEP 336
F + G+ + A K + +G+ D YG +I GL + ++A +I + M K P
Sbjct: 277 GFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVP 336
Query: 337 SFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMK-GEVERAIRGL 395
++ +M + ++ A ++Y + ++ D +++ + + K G++ AI
Sbjct: 337 DMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAI--- 393
Query: 396 LELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAK 455
+ F N Y++L+ C+ E +FS + E + + I+GLC +
Sbjct: 394 --VYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQ 451
Query: 456 RNLYDA 461
NL DA
Sbjct: 452 GNLVDA 457
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/415 (21%), Positives = 172/415 (41%), Gaps = 51/415 (12%)
Query: 63 EAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAII 122
EA R+ K LPD + L N ++K A ++ RG P +N+++
Sbjct: 4 EALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVV 63
Query: 123 KGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQ---EMFNQMEKL 179
C +GQ+ A + + D ++ LI C+ G +R A E
Sbjct: 64 SFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGF 123
Query: 180 GCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKK 239
C P V+FN+L NG K LDE + M SP++ V+
Sbjct: 124 ICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNV--------------VTYSTW 169
Query: 240 VEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGL 299
++ C++G+ A K + + P++ T+ LI+ +CKAG++ A L+K+++ +
Sbjct: 170 IDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRM 229
Query: 300 SPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFS 359
S + VTY LIDG + + A ++ M++ EP+ VY +
Sbjct: 230 SLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTI--------------- 274
Query: 360 LYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQ 419
++ +F +G+ + A++ L ++ + ++ Y +++ G C
Sbjct: 275 -------------------IDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCG 315
Query: 420 AKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFE 474
K+ EA I +++ ++ + +++ + AV ++ +++GFE
Sbjct: 316 NGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFE 370
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 85/177 (48%), Gaps = 5/177 (2%)
Query: 4 RRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNE 63
R F+ D+ + +++G K G+L EA+ +E+ + Y+ LID K + E
Sbjct: 367 RGFEPDVVALSTMIDGIAKNGQLHEAIVYF-CIEKANDVM----YTVLIDALCKEGDFIE 421
Query: 64 AHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIK 123
L+ ++ + G++PD +Y + GL +G + +A K+ M+Q GLL D Y +I
Sbjct: 422 VERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIY 481
Query: 124 GFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
G G + AR + E+ D+ +LI K+G + A ++ M++ G
Sbjct: 482 GLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRG 538
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Query: 13 FNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMI 72
+ + G CKQG L +A L + ++G + L Y++LI G EA ++ M+
Sbjct: 441 YTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEML 500
Query: 73 KGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGL---LPDAHC 117
GI PD ++ +++R EG + A + +M +RGL + DA C
Sbjct: 501 NSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAVSDADC 548
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 176/358 (49%), Gaps = 16/358 (4%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
F D+ FNV L+ C++ K+ AV + + GR + Y+ LI+G F+A + +A
Sbjct: 110 FIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAV 169
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLP-DAHCYNAIIKG 124
++ MI+ G+ PD A ++ GL + +V A +M AE I+ + YNA+I G
Sbjct: 170 EIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISG 229
Query: 125 FCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPS 184
FC G+++ A +L +S D T+ +L+ M++ A+ + +M + G
Sbjct: 230 FCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLD 289
Query: 185 AVTFNALINGLCKAGKLDEAHLLFYK-MEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHM 243
A ++N L+ C+ D+ + K ME P F D VS +E
Sbjct: 290 AYSYNQLLKRHCRVSHPDKCYNFMVKEME----PRGF----------CDVVSYSTLIETF 335
Query: 244 CEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDS 303
C A T AY+L ++ G+V ++ TY LI +F + GN + A KL + GLSPD
Sbjct: 336 CRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDR 395
Query: 304 VTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLY 361
+ Y T++D L + + A+ + + M++H P Y +L++ LCR +++ A L+
Sbjct: 396 IFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLF 453
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 170/367 (46%), Gaps = 51/367 (13%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRG------------------ 42
M R + D+ ++ +L+NG + GK+ +AV + + R G
Sbjct: 140 MVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARK 199
Query: 43 ----------------IRLSG--YSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYA 84
++LS Y++LI GF KA R +A +L M K G PD++ Y
Sbjct: 200 VDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYN 259
Query: 85 IMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGH 144
++L + + A + AEM++ G+ DA+ YN ++K C + D + V+
Sbjct: 260 VLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEP 319
Query: 145 DGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEA 204
G D +++ LI C+ R+A +F +M + G + VT+ +LI + G A
Sbjct: 320 RGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVA 379
Query: 205 HLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSG 263
L +M E+G SP D + ++H+C++G AY + + +
Sbjct: 380 KKLLDQMTELGLSP--------------DRIFYTTILDHLCKSGNVDKAYGVFNDMIEHE 425
Query: 264 VVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAF 323
+ PD +YN LI+ C++G + A KLF+D++ K PD +T+ +I GL R ++ A+
Sbjct: 426 ITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAY 485
Query: 324 KIRDHML 330
K+ D M+
Sbjct: 486 KVWDQMM 492
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 107/459 (23%), Positives = 196/459 (42%), Gaps = 58/459 (12%)
Query: 13 FNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMI 72
+N + ++ + E A ++ ++ G + YS I G K ++++ +L M
Sbjct: 47 YNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDME 106
Query: 73 KGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLD 132
G +PD+ + + L L E +VG AV+ F M+QRG PD
Sbjct: 107 TLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPD------------------ 148
Query: 133 HARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALI 192
++TILI + + G V +A E++N M + G P AL+
Sbjct: 149 -----------------VVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALV 191
Query: 193 NGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNA 252
GLC A K+D L Y+M + S +L+ +V + C+AG+ A
Sbjct: 192 VGLCHARKVD----LAYEMVAEEIKSARVKLS--------TVVYNALISGFCKAGRIEKA 239
Query: 253 YKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDG 312
L + ++ G PD+ TYN+L+N + + A + ++ G+ D+ +Y L+
Sbjct: 240 EALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKR 299
Query: 313 LYRVEREEDA--FKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPG 370
RV + F +++ + C+ Y L+ CR A+ L+ E +
Sbjct: 300 HCRVSHPDKCYNFMVKEMEPRGFCD--VVSYSTLIETFCRASNTRKAYRLFEEMRQKGMV 357
Query: 371 RDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAP----YSILLIGFCQAKKVDEA 426
+ + +L + F++ + LL+ + + L+P Y+ +L C++ VD+A
Sbjct: 358 MNVVTYTSLIKAFLREGNSSVAKKLLD---QMTELGLSPDRIFYTTILDHLCKSGNVDKA 414
Query: 427 LIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIF 465
+F+ + E I + S LISGLC + +A+ +F
Sbjct: 415 YGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLF 453
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 140/311 (45%), Gaps = 23/311 (7%)
Query: 5 RFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEA 64
R + +N L++GFCK G++E+A +L + + G L Y+ L++ ++ A
Sbjct: 215 RVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRA 274
Query: 65 HSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVK----MFAEMIQRGLLPDAHCYNA 120
+ M++ GI D Y +L+ RV K M EM RG D Y+
Sbjct: 275 EGVMAEMVRSGIQLDAYSYNQLLK---RHCRVSHPDKCYNFMVKEMEPRGFC-DVVSYST 330
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I+ FC A L E+ + + T+T LI ++G A+++ +QM +LG
Sbjct: 331 LIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELG 390
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKK 239
P + + +++ LCK+G +D+A+ +F M E +P D++S
Sbjct: 391 LSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITP--------------DAISYNSL 436
Query: 240 VEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGL 299
+ +C +G+ A KL + PD T+ +I + ++ A+K++ + KG
Sbjct: 437 ISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGF 496
Query: 300 SPDSVTYGTLI 310
+ D TLI
Sbjct: 497 TLDRDVSDTLI 507
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 89/188 (47%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D+ +++ L+ FC+ +A L + + G + + Y+SLI F + + A L
Sbjct: 324 DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLL 383
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
+M + G+ PD I Y +L L G V +A +F +MI+ + PDA YN++I G C
Sbjct: 384 DQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRS 443
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
G++ A L ++ G + D T +I + + + A ++++QM G
Sbjct: 444 GRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVS 503
Query: 189 NALINGLC 196
+ LI C
Sbjct: 504 DTLIKASC 511
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 112/240 (46%), Gaps = 21/240 (8%)
Query: 157 ICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKME-IGK 215
I + K GM+ A ++F++M + +N I L + + + A +++ M+ +G
Sbjct: 16 IANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGF 75
Query: 216 S--PSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNI 273
S P + R G +C+ + LL+ + G +PDI +N+
Sbjct: 76 SLIPFTYSRFISG----------------LCKVKKFDLIDALLSDMETLGFIPDIWAFNV 119
Query: 274 LINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHV 333
++ C+ + A + F + +G PD V+Y LI+GL+R + DA +I + M++
Sbjct: 120 YLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSG 179
Query: 334 CEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSI-NALEEYFMK-GEVERA 391
P AL+ LC +K+ LA+ + E +KS + + + NAL F K G +E+A
Sbjct: 180 VSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKA 239
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 141/537 (26%), Positives = 245/537 (45%), Gaps = 29/537 (5%)
Query: 5 RFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEA 64
R + +NVL++G CK ++ +A L + L Y++LIDG+ KA ++
Sbjct: 209 RIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKS 268
Query: 65 HSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKG 124
+ RM I P +I + +L+GL G V +A + EM G +PDA ++ + G
Sbjct: 269 FKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDG 328
Query: 125 FCDIGQLDHARSLHVEISGHDGLH-DTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFP 183
+ + + A ++ E + G+ + T +IL+ +CK+G + +A+E+ + G P
Sbjct: 329 YSSNEKAEAALGVY-ETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVP 387
Query: 184 SAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHM 243
+ V +N +I+G C+ G L A + ME + DH++ + +++
Sbjct: 388 NEVIYNTMIDGYCRKGDLVGARMKIEAME---------KQGMKPDHLAYNCLIRR----F 434
Query: 244 CEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDS 303
CE G+ NA K + ++ GV P ++TYNILI + + + F + K+++ G P+
Sbjct: 435 CELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNV 494
Query: 304 VTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLE 363
V+YGTLI+ L + + +A ++ M P +Y L+ C KI AF E
Sbjct: 495 VSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKE 554
Query: 364 YLKSLPGRDNDSINAL-EEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKK 422
LK + + N L + M G++ A LLE+ + ++ Y+ L+ G+ A
Sbjct: 555 MLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGN 614
Query: 423 VDEALIIFSVLDEFNININPT-SCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPK--I 479
V + ++ + I PT HL+ LC K + +F L P +
Sbjct: 615 VQRCIALYEEMKRS--GIKPTLKTYHLLISLCTKEGIELTERLF-----GEMSLKPDLLV 667
Query: 480 CKELLECLLVSQDKRKYAIDLIGRMKSRGYRLHKYQYRQTISLLQQLQEGKAVKLFS 536
+L C V D K A +L +M + L K Y I L QL+ GK ++ S
Sbjct: 668 YNGVLHCYAVHGDMEK-AFNLQKQMIEKSIGLDKTTYNSLI--LGQLKVGKLCEVRS 721
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 194/427 (45%), Gaps = 19/427 (4%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M RR L T+N L++G+CK G E++ + ++ D L +++L+ G FKA
Sbjct: 240 MLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGM 299
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+A ++ M G +PD ++I+ G S+ + A+ ++ + G+ +A+ +
Sbjct: 300 VEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSI 359
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
++ C G+++ A + + + + +I C+KG + A+ MEK G
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQG 419
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEI-GKSPSL-FFRLAQGSDHVSDSVSLQK 238
P + +N LI C+ G+++ A KM++ G SPS+ + + G +
Sbjct: 420 MKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIG--------GYGR 471
Query: 239 KVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKG 298
K E + +L ++ D+G +P++ +Y LIN CK + A + +D++ +G
Sbjct: 472 KYEFD-------KCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRG 524
Query: 299 LSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAF 358
+SP Y LIDG + EDAF+ MLK E + Y L+ L K+S A
Sbjct: 525 VSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAE 584
Query: 359 SLYLEYLKSLPGRDNDSINAL-EEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGF 417
L LE + D + N+L Y G V+R I E+ L Y LLI
Sbjct: 585 DLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYH-LLISL 643
Query: 418 CQAKKVD 424
C + ++
Sbjct: 644 CTKEGIE 650
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 131/510 (25%), Positives = 237/510 (46%), Gaps = 33/510 (6%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGY--SSLIDGFFKARRYNE 63
F D TF++L +G+ K E A+ + G++++ Y S L++ K + +
Sbjct: 315 FVPDAFTFSILFDGYSSNEKAEAALGVYETAV--DSGVKMNAYTCSILLNALCKEGKIEK 372
Query: 64 AHSLYGRMIKGGILPDVILYAIMLRGLSNEGR-VGEAVKMFAEMIQRGLLPDAHCYNAII 122
A + GR + G++P+ ++Y M+ G +G VG +K+ A M ++G+ PD YN +I
Sbjct: 373 AEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEA-MEKQGMKPDHLAYNCLI 431
Query: 123 KGFCDIGQLDHARSLHVEISGHDGLHDTC-THTILICEMCKKGMVREAQEMFNQMEKLGC 181
+ FC++G++++A V G+ + T+ ILI +K + ++ +ME G
Sbjct: 432 RRFCELGEMENAEK-EVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGT 490
Query: 182 FPSAVTFNALINGLCKAGKLDEAHLLFYKME-IGKSPSLFFRLAQGSDHVSDSVSLQKKV 240
P+ V++ LIN LCK KL EA ++ ME G SP + +
Sbjct: 491 MPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRI--------------YNMLI 536
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLS 300
+ C G+ +A++ ++ G+ ++ TYN LI+ G ++ A L ++ KGL
Sbjct: 537 DGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLK 596
Query: 301 PDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSL 360
PD TY +LI G + + + M + +P+ Y L++ LC + I L L
Sbjct: 597 PDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS-LCTKEGIELTERL 655
Query: 361 YLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQA 420
+ E SL L Y + G++E+A ++ + + Y+ L++G +
Sbjct: 656 FGEM--SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKV 713
Query: 421 KKVDEALIIFSVLDEFNI-NINPTSCVH--LISGLCAKRNLYDAVVIFLYSLDKGFELGP 477
K+ E + S++DE N + P + + ++ G C ++ A V + +KGF L
Sbjct: 714 GKLCE---VRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDV 770
Query: 478 KICKELLECLLVSQDKRKYAIDLIGRMKSR 507
I EL+ L + + K A +I M R
Sbjct: 771 CIGNELVSG-LKEEWRSKEAEIVISEMNGR 799
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 128/513 (24%), Positives = 220/513 (42%), Gaps = 24/513 (4%)
Query: 13 FNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMI 72
+VLLN + + EA L L +G + L+D K +++ +++ ++
Sbjct: 115 LSVLLN---ESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNIL 171
Query: 73 KGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLD 132
+ P +Y ++ VG+ +++F M + P YN +I G C +++
Sbjct: 172 ESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMN 231
Query: 133 HARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALI 192
A L E+ L T+ LI CK G ++ ++ +M+ PS +TFN L+
Sbjct: 232 DAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLL 291
Query: 193 NGLCKAGKLDEAHLLFYKM-EIGKSPSLF-FRLAQGSDHVSDSVSLQKKVEHMCEAGQTL 250
GL KAG +++A + +M ++G P F F + + D S +K E L
Sbjct: 292 KGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSI------LFDGYSSNEKAE------AAL 339
Query: 251 NAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLI 310
Y+ DSGV + T +IL+N+ CK G + A ++ KGL P+ V Y T+I
Sbjct: 340 GVYE---TAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMI 396
Query: 311 DGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCR-GKKISLAFSLYLEYLKSL- 368
DG R A + M K +P Y L+ C G+ + + LK +
Sbjct: 397 DGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVS 456
Query: 369 PGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALI 428
P + +I + Y K E ++ L E++ N+ Y L+ C+ K+ EA I
Sbjct: 457 PSVETYNI-LIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQI 515
Query: 429 IFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKELLECLL 488
+ +++ ++ LI G C+K + DA L KG EL L++ L
Sbjct: 516 VKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLS 575
Query: 489 VSQDKRKYAIDLIGRMKSRGYRLHKYQYRQTIS 521
++ K A DL+ + +G + + Y IS
Sbjct: 576 MT-GKLSEAEDLLLEISRKGLKPDVFTYNSLIS 607
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 156/345 (45%), Gaps = 28/345 (8%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M ++ + T+N+L+ G+ ++ + ++ +L+ +E +G + Y +LI+ K +
Sbjct: 450 MKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSK 509
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
EA + M G+ P V +Y +++ G ++G++ +A + EM+++G+ + YN
Sbjct: 510 LLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNT 569
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I G G+L A L +EIS D T+ LI G V+ ++ +M++ G
Sbjct: 570 LIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSG 629
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLF------------------FR 222
P+ T++ LI+ LC ++ LF +M + P L F
Sbjct: 630 IKPTLKTYHLLIS-LCTKEGIELTERLFGEMSL--KPDLLVYNGVLHCYAVHGDMEKAFN 686
Query: 223 LAQGSDHVSDSVSLQKKVEH-----MCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINS 277
L + + S+ L K + + G+ L+ ++ + P+ TYNI++
Sbjct: 687 LQK--QMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKG 744
Query: 278 FCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDA 322
C+ + A+ ++++Q KG D L+ GL R ++A
Sbjct: 745 HCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEA 789
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 115/407 (28%), Positives = 191/407 (46%), Gaps = 46/407 (11%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGF----- 55
M+ + ++ TFN+++N CK+GKL++A L ++E G + Y++L+ GF
Sbjct: 216 MYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGR 275
Query: 56 ----------FKARRYNEAHSLY----------GR-------MIKGGILPDVILYAIMLR 88
K++ + Y GR M + G++PD + Y I++R
Sbjct: 276 IEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIR 335
Query: 89 GLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLH 148
G SN G + A EM+++G++P + YN +I G +++ A L EI +
Sbjct: 336 GCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVL 395
Query: 149 DTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLF 208
D+ T+ ILI C+ G ++A + ++M G P+ T+ +LI LC+ K EA LF
Sbjct: 396 DSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELF 455
Query: 209 YKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDI 268
K+ +GK D V + ++ C G A+ LL ++ + PD
Sbjct: 456 EKV-VGKGMK------------PDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDD 502
Query: 269 KTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDH 328
TYN L+ C G A +L +++ +G+ PD ++Y TLI G + + AF +RD
Sbjct: 503 VTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDE 562
Query: 329 MLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDS 375
ML P+ Y AL+ L + ++ LA L L +KS NDS
Sbjct: 563 MLSLGFNPTLLTYNALLKGLSKNQEGELAEEL-LREMKSEGIVPNDS 608
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 116/472 (24%), Positives = 205/472 (43%), Gaps = 21/472 (4%)
Query: 80 VILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHV 139
IL+ +++R V EA++ F M ++G P N I+ + ++++A +
Sbjct: 155 TILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYA 214
Query: 140 EISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAG 199
++ + + T I+I +CK+G +++A+ ME G P+ VT+N L+ G G
Sbjct: 215 DMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRG 274
Query: 200 KLDEAHLLFYKMEI--------GKSPSLFFRLAQGSDH-----------VSDSVSLQKKV 240
+++ A L+ +M+ +P L + +G V DSVS +
Sbjct: 275 RIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILI 334
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLS 300
G A+ ++ G+VP TYN LI+ + A L ++++ KG+
Sbjct: 335 RGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIV 394
Query: 301 PDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSL 360
DSVTY LI+G + + AF + D M+ +P+ Y +L+ LCR K A L
Sbjct: 395 LDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADEL 454
Query: 361 YLEYLKSLPGRDNDSINALEE-YFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQ 419
+ + + D +N L + + G ++RA L E+D + + Y+ L+ G C
Sbjct: 455 FEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCG 514
Query: 420 AKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKI 479
K +EA + + I + S LISG K + A ++ L GF
Sbjct: 515 EGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLT 574
Query: 480 CKELLECLLVSQDKRKYAIDLIGRMKSRGYRLHKYQYRQTISLLQQLQEGKA 531
LL+ L +Q+ + A +L+ MKS G + + I + L K+
Sbjct: 575 YNALLKGLSKNQEG-ELAEELLREMKSEGIVPNDSSFCSVIEAMSNLDAKKS 625
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 157/353 (44%), Gaps = 53/353 (15%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M + FQ D+ T+N +L+ C +G+ E +LR ++ G Y+ LI G
Sbjct: 286 MKSKGFQPDMQTYNPILSWMCNEGRASE---VLREMKEIGLVPDSVSYNILIRGCSNNGD 342
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
A + M+K G++P Y ++ GL E ++ A + E+ ++G++ D+ YN
Sbjct: 343 LEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNI 402
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDT-CTHTILICEMCKKGMVREAQEMFN----- 174
+I G+C G A +LH E+ DG+ T T+T LI +C+K REA E+F
Sbjct: 403 LINGYCQHGDAKKAFALHDEMMT-DGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGK 461
Query: 175 ------------------------------QMEKLGCFPSAVTFNALINGLCKAGKLDEA 204
+M+ + P VT+N L+ GLC GK +EA
Sbjct: 462 GMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEA 521
Query: 205 HLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGV 264
L +M+ R DH +S + + G T +A+ + ++ G
Sbjct: 522 RELMGEMK---------RRGIKPDH----ISYNTLISGYSKKGDTKHAFMVRDEMLSLGF 568
Query: 265 VPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVE 317
P + TYN L+ K A +L ++++ +G+ P+ ++ ++I+ + ++
Sbjct: 569 NPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNLD 621
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 121/281 (43%), Gaps = 37/281 (13%)
Query: 184 SAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEH 242
S + F+ L+ C+ +DEA FY M E G F+ + +H+ +S ++E
Sbjct: 154 STILFDLLVRCCCQLRMVDEAIECFYLMKEKG-----FYPKTETCNHILTLLSRLNRIE- 207
Query: 243 MCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPD 302
NA+ + + ++ T+NI+IN CK G + A +++ G+ P
Sbjct: 208 --------NAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPT 259
Query: 303 SVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYL 362
VTY TL+ G R E A I M +P Y +++W+C + S
Sbjct: 260 IVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRAS------- 312
Query: 363 EYLKSLP--GRDNDSINALEEYFMKGEVERAIRGLLELDFRFRD----FNLAP----YSI 412
E L+ + G DS++ ++G + G LE+ F +RD + P Y+
Sbjct: 313 EVLREMKEIGLVPDSVSY--NILIRG---CSNNGDLEMAFAYRDEMVKQGMVPTFYTYNT 367
Query: 413 LLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLC 453
L+ G K++ A I+ + E I ++ + LI+G C
Sbjct: 368 LIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYC 408
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 103/422 (24%), Positives = 194/422 (45%), Gaps = 49/422 (11%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
++ + + + C+ K+EEA + L+++ G L YS++IDG+ K +A+ LY
Sbjct: 233 NVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLY 292
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
++ +LP+V+++ ++ G + A +F M++ G+ P+ + YN +I G C
Sbjct: 293 KEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKS 352
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
G + A L E+ + D T+TILI +C + V EA +F +M+ FPS+ T+
Sbjct: 353 GNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATY 412
Query: 189 NALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQ 248
N+LI+G CK Y ME
Sbjct: 413 NSLIHGYCKE----------YNME------------------------------------ 426
Query: 249 TLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGT 308
A L +++ SGV P+I T++ LI+ +C ++ A L+ ++ +KG+ PD VTY
Sbjct: 427 --QALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTA 484
Query: 309 LIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSL 368
LID ++ ++A ++ ML+ P+ + L+ + ++S+A Y E +
Sbjct: 485 LIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQR 544
Query: 369 PGRDNDSINALEEYFMK-GEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEAL 427
++ L E + G + RA R ++ ++ Y +L G Q K++ + +
Sbjct: 545 SCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTM 604
Query: 428 II 429
++
Sbjct: 605 ML 606
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/451 (26%), Positives = 203/451 (45%), Gaps = 16/451 (3%)
Query: 16 LLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKGG 75
+LNG ++ + + +L+ G + Y L FK Y++ L M G
Sbjct: 170 ILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLG 229
Query: 76 ILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHAR 135
I P+V +Y I + L + ++ EA KMF M + G+LP+ + Y+A+I G+C G + A
Sbjct: 230 IKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAY 289
Query: 136 SLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGL 195
L+ EI + L + L+ CK + A+ +F M K G P+ +N LI+G
Sbjct: 290 GLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGH 349
Query: 196 CKAGKLDEAHLLFYKME-IGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYK 254
CK+G + EA L +ME + SP +F + + +C Q A +
Sbjct: 350 CKSGNMLEAVGLLSEMESLNLSPDVF--------------TYTILINGLCIEDQVAEANR 395
Query: 255 LLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLY 314
L ++ + + P TYN LI+ +CK NM A L ++ G+ P+ +T+ TLIDG
Sbjct: 396 LFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYC 455
Query: 315 RVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDND 374
V + A + M P Y AL+ + + A LY + L++ ++
Sbjct: 456 NVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDH 515
Query: 375 SINALEEYFMK-GEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVL 433
+ L + F K G + AI E + + +N ++ L+ G CQ + A FS +
Sbjct: 516 TFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDM 575
Query: 434 DEFNININPTSCVHLISGLCAKRNLYDAVVI 464
I + S V ++ G ++ + D +++
Sbjct: 576 RSCGITPDICSYVSMLKGHLQEKRITDTMML 606
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/479 (25%), Positives = 211/479 (44%), Gaps = 31/479 (6%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLE--RDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
+ F++L+ F + G EEA+ + R ++ D + S+++G + RR++
Sbjct: 131 SIGVFSLLIMEFLEMGLFEEALWVSREMKCSPDSKACL-----SILNGLVRRRRFDSVWV 185
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
Y MI G++PDV +Y ++ + +G + K+ EM G+ P+ + Y I C
Sbjct: 186 DYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLC 245
Query: 127 DIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAV 186
+++ A + + H L + T++ +I CK G VR+A ++ ++ P+ V
Sbjct: 246 RDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVV 305
Query: 187 TFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCE 245
F L++G CKA +L A LF M + G P+L+ H C+
Sbjct: 306 VFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGH--------------CK 351
Query: 246 AGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVT 305
+G L A LL+++ + PD+ TY ILIN C + A +LF+ ++ + + P S T
Sbjct: 352 SGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSAT 411
Query: 306 YGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYL 365
Y +LI G + E A + M EP+ + L+ C + I A LY E
Sbjct: 412 YNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMT 471
Query: 366 KSLPGRDNDSINAL-EEYFMKGEVERAIR---GLLELDFRFRDFNLAPYSILLIGFCQAK 421
D + AL + +F + ++ A+R +LE D A L+ GF +
Sbjct: 472 IKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFA---CLVDGFWKEG 528
Query: 422 KVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKIC 480
++ A+ + ++ N LI GLC +N Y +S + + P IC
Sbjct: 529 RLSVAIDFYQENNQQRSCWNHVGFTCLIEGLC--QNGYILRASRFFSDMRSCGITPDIC 585
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 150/337 (44%), Gaps = 15/337 (4%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
++ F L++GFCK +L A SL + + G L Y+ LI G K+ EA L
Sbjct: 303 NVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLL 362
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
M + PDV Y I++ GL E +V EA ++F +M + P + YN++I G+C
Sbjct: 363 SEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKE 422
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
++ A L E++ + T + LI C ++ A ++ +M G P VT+
Sbjct: 423 YNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTY 482
Query: 189 NALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAG 247
ALI+ K + EA L+ M E G P +DH + V+ + G
Sbjct: 483 TALIDAHFKEANMKEALRLYSDMLEAGIHP---------NDHTFACL-----VDGFWKEG 528
Query: 248 QTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYG 307
+ A + + + LI C+ G + A + F D++ G++PD +Y
Sbjct: 529 RLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYV 588
Query: 308 TLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKAL 344
+++ G + +R D ++ M+K P+ V + L
Sbjct: 589 SMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLL 625
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 170/338 (50%), Gaps = 18/338 (5%)
Query: 9 DLATFNVLLNGFCK---QGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
++ ++N L++G+CK GK+ +A ++L+ + + L+ ++ LIDGF+K +
Sbjct: 257 NVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSM 316
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
++ M+ + P+VI Y ++ GL N G++ EA+ M +M+ G+ P+ YNA+I GF
Sbjct: 317 KVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGF 376
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
C L A + + G + T + +LI CK G + + + +ME+ G P
Sbjct: 377 CKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDV 436
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCE 245
T+N LI GLC+ G ++ A LF ++ S + D V+ +E C
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLT--------------SKGLPDLVTFHILMEGYCR 482
Query: 246 AGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQL-KGLSPDSV 304
G++ A LL +++ G+ P TYNI++ +CK GN+ A + ++ + L +
Sbjct: 483 KGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVA 542
Query: 305 TYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYK 342
+Y L+ G + + EDA + + ML+ P+ Y+
Sbjct: 543 SYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYE 580
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/415 (25%), Positives = 190/415 (45%), Gaps = 28/415 (6%)
Query: 86 MLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHD 145
++ L E R + ++ EMI+R + P+ +N +I C G+++ AR + ++ +
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 146 GLHDTCTHTILI---CEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLD 202
+ ++ LI C++ G + +A + +M + P+ TFN LI+G K L
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313
Query: 203 EAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADS 262
+ +F +M L Q D + +S + +C G+ A + ++ +
Sbjct: 314 GSMKVFKEM-----------LDQ--DVKPNVISYNSLINGLCNGGKISEAISMRDKMVSA 360
Query: 263 GVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDA 322
GV P++ TYN LIN FCK + A +F ++ +G P + Y LID ++ + +D
Sbjct: 361 GVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDG 420
Query: 323 FKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYL-KSLPGRDNDSINALEE 381
F +++ M + P Y L+ LCR I A L+ + K LP I +E
Sbjct: 421 FALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHI-LMEG 479
Query: 382 YFMKGEVERAIRGLLELDFRFRDFNLAP----YSILLIGFCQAKKVDEALIIFSVLD-EF 436
Y KGE +A L E+ L P Y+I++ G+C+ + A + + ++ E
Sbjct: 480 YCRKGESRKAAMLLKEMS----KMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKER 535
Query: 437 NININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKELLECLLVSQ 491
+ +N S L+ G K L DA ++ L+KG + +I E+++ +V Q
Sbjct: 536 RLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGL-VPNRITYEIVKEEMVDQ 589
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 115/214 (53%), Gaps = 3/214 (1%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
Q +L T+N L+NGFCK L+EA+ + ++ G Y+ LID + K + ++ +
Sbjct: 363 QPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFA 422
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
L M + GI+PDV Y ++ GL G + A K+F ++ +G LPD ++ +++G+C
Sbjct: 423 LKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYC 481
Query: 127 DIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAV 186
G+ A L E+S T+ I++ CK+G ++ A M QMEK V
Sbjct: 482 RKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNV 541
Query: 187 -TFNALINGLCKAGKLDEAHLLFYKM-EIGKSPS 218
++N L+ G + GKL++A++L +M E G P+
Sbjct: 542 ASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPN 575
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 83/172 (48%), Gaps = 3/172 (1%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D+ T+N L+ G C+ G +E A L L G L + L++G+ + +A L
Sbjct: 435 DVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLL 493
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEM-IQRGLLPDAHCYNAIIKGFCD 127
M K G+ P + Y I+++G EG + A M +M +R L + YN +++G+
Sbjct: 494 KEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQ 553
Query: 128 IGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQ-EMFNQMEK 178
G+L+ A L E+ + + T+ I+ EM +G V + + +FN K
Sbjct: 554 KGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEGHLFNVSTK 605
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/474 (25%), Positives = 215/474 (45%), Gaps = 20/474 (4%)
Query: 2 WMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRY 61
W+R F + +L NG + +A+ L + + ++ L+ K RY
Sbjct: 44 WIRAFS---SYRKILRNGL-HNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRY 99
Query: 62 NEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAI 121
+ SL+ +M GI P + I++ + + A +M++ G PD + ++
Sbjct: 100 DVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSL 159
Query: 122 IKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGC 181
+ G+C +++ A +L +I G + T+T LI +CK + A E+FNQM G
Sbjct: 160 LNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGS 219
Query: 182 FPSAVTFNALINGLCKAGKL-DEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKV 240
P+ VT+NAL+ GLC+ G+ D A LL M+ P++ ++ +
Sbjct: 220 RPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNV--------------ITFTALI 265
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLS 300
+ + G+ + A +L + V PD+ TY LIN C G ++ A ++F ++ G
Sbjct: 266 DAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCY 325
Query: 301 PDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSL 360
P+ V Y TLI G + +R ED KI M + + Y L+ C + +A +
Sbjct: 326 PNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEV 385
Query: 361 YLEYLKSLPGRDNDSINA-LEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQ 419
+ + D + N L+ G+VE+A+ + R D N+ Y+I++ G C+
Sbjct: 386 FNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCK 445
Query: 420 AKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGF 473
KV++A +F L + N + +ISG C + +++A +F + GF
Sbjct: 446 LGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGF 499
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 168/372 (45%), Gaps = 48/372 (12%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
F+ DL TF LLNG+C ++E+A++L + G + Y++LI K R N A
Sbjct: 149 FEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAV 208
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
L+ +M G P+V+ Y ++ GL GR G+A + +M++R + P+ + A+I F
Sbjct: 209 ELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAF 268
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPS- 184
+G+L A+ L+ + D T+ LI +C G++ EA++MF ME+ GC+P+
Sbjct: 269 VKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNE 328
Query: 185 ----------------------------------AVTFNALINGLCKAGKLDEAHLLFYK 210
+T+ LI G C G+ D A +F +
Sbjct: 329 VIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQ 388
Query: 211 MEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKT 270
M ++P D + ++ +C G+ A + + + +I T
Sbjct: 389 MSSRRAP-------------PDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVT 435
Query: 271 YNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHML 330
Y I+I CK G + AF LF L KG+ P+ +TY T+I G R +A + M
Sbjct: 436 YTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMK 495
Query: 331 KHVCEPSFAVYK 342
+ P+ +VYK
Sbjct: 496 EDGFLPNESVYK 507
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 201/452 (44%), Gaps = 30/452 (6%)
Query: 37 ERDGRGIRLSGYSSLIDGFFKARR----------YNEAHSLYGRMIKGGILPDVILYAIM 86
R + L G+ I F R+ +N+A L+ RM+ LP +I + +
Sbjct: 30 PRTAASLSLCGFCFWIRAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRL 89
Query: 87 LRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDG 146
L ++ R + +F +M G+ P N ++ C Q A ++
Sbjct: 90 LSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGF 149
Query: 147 LHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHL 206
D T T L+ C + +A +F+Q+ +G P+ VT+ LI LCK L+ A
Sbjct: 150 EPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVE 209
Query: 207 LFYKMEI-GKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVV 265
LF +M G P++ V+ V +CE G+ +A LL + +
Sbjct: 210 LFNQMGTNGSRPNV--------------VTYNALVTGLCEIGRWGDAAWLLRDMMKRRIE 255
Query: 266 PDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKI 325
P++ T+ LI++F K G + A +L+ + + PD TYG+LI+GL ++A ++
Sbjct: 256 PNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQM 315
Query: 326 RDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSIN---ALEEY 382
M ++ C P+ +Y L+ C+ K++ ++ E S G ++I ++ Y
Sbjct: 316 FYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYE--MSQKGVVANTITYTVLIQGY 373
Query: 383 FMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININP 442
+ G + A ++ R ++ Y++LL G C KV++AL+IF + + ++IN
Sbjct: 374 CLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINI 433
Query: 443 TSCVHLISGLCAKRNLYDAVVIFLYSLDKGFE 474
+ +I G+C + DA +F KG +
Sbjct: 434 VTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMK 465
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 138/306 (45%), Gaps = 48/306 (15%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M RR + ++ TF L++ F K GKL EA L ++ + + Y SLI+G
Sbjct: 249 MMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGL 308
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+EA ++ M + G P+ ++Y ++ G RV + +K+F EM Q+G++ + Y
Sbjct: 309 LDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTV 368
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I+G+C +G+ D A+ + ++S D T+ +L+ +C G V +A +F M K
Sbjct: 369 LIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKRE 428
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKV 240
+ VT+ +I G+CK GK+++A
Sbjct: 429 MDINIVTYTIIIQGMCKLGKVEDA------------------------------------ 452
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLS 300
+ L L G+ P++ TY +I+ FC+ G ++ A LFK ++ G
Sbjct: 453 ------------FDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFL 500
Query: 301 PDSVTY 306
P+ Y
Sbjct: 501 PNESVY 506
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 138/597 (23%), Positives = 259/597 (43%), Gaps = 65/597 (10%)
Query: 4 RRFQRDLA--TFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGY-SSLIDGFFKARR 60
+RF +L FN LLN + + +++ AV L+ D + + Y ++++ ++
Sbjct: 161 KRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLM-VDRKVVPFVPYVNNVLSSLVRSNL 219
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+EA +Y +M+ G+ D + +++R E + EAVK+F ++ RG PD ++
Sbjct: 220 IDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSL 279
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTC-THTILICEMCKKGMVREAQEMFNQMEKL 179
++ C L A L E+ G G+ + T+T +I K+G + EA + ++M
Sbjct: 280 AVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGF 339
Query: 180 GCFPSAVTFNALINGLCKAGKLDEAHLLFYKME--------------------------- 212
G S + +L+NG CK +L +A LF +ME
Sbjct: 340 GIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKA 399
Query: 213 -----------IGKSPSLFFRLAQG-----SDHVSDSV---SLQKKVEH----------M 243
I S L + QG S + + S + + H
Sbjct: 400 IEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLF 459
Query: 244 CEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDS 303
C+ G+ A L + G+ P++ YN ++ + C+ NM+ A +F ++ KGL P++
Sbjct: 460 CKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNN 519
Query: 304 VTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLE 363
TY LIDG ++ + E++A+ + + M E + +Y ++ LC+ + S A +
Sbjct: 520 FTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQN 579
Query: 364 YLKSLP-GRDNDSINALEEYFMK-GEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAK 421
+K S N++ + F+K G+ + A+ E+ + N+ ++ L+ GFC++
Sbjct: 580 LIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSN 639
Query: 422 KVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICK 481
++D AL + + + ++ + LI G C K ++ A +F + G +
Sbjct: 640 RMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYN 699
Query: 482 ELLECLLVSQDKRKYAIDLIGRMKSRGYRLHKYQYRQTIS-LLQQLQEGKAVKLFSE 537
L+ + K AIDL +M + G + Y I LL+ A L+SE
Sbjct: 700 SLISGFR-NLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSE 755
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 154/333 (46%), Gaps = 51/333 (15%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGR-GIRLSGYSSLIDGFFKAR 59
M F+ + +N ++NG CK G+ +A +L+ L ++ R + + Y+S+IDGF K
Sbjct: 545 MNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVG 604
Query: 60 RYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYN 119
+ A Y M + G P+V+ + ++ G R+ A++M EM L D Y
Sbjct: 605 DTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYG 664
Query: 120 AIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKL 179
A+I GFC KK ++ A +F+++ +L
Sbjct: 665 ALIDGFC-----------------------------------KKNDMKTAYTLFSELPEL 689
Query: 180 GCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVS-DSVSLQK 238
G P+ +N+LI+G GK+D A L+ KM +D +S D +
Sbjct: 690 GLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMV--------------NDGISCDLFTYTT 735
Query: 239 KVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKG 298
++ + + G A L ++L D G+VPD + +L+N K G A K+ ++++ K
Sbjct: 736 MIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKD 795
Query: 299 LSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLK 331
++P+ + Y T+I G +R +AF++ D ML+
Sbjct: 796 VTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLE 828
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 182/409 (44%), Gaps = 55/409 (13%)
Query: 20 FCKQGKLEEAVSLLRLLERDG---------------------------------RGIRLS 46
FCKQGK++ A S L+++E+ G +G+ +
Sbjct: 459 FCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPN 518
Query: 47 G--YSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFA 104
YS LIDGFFK + A + +M + ++Y ++ GL G+ +A +M
Sbjct: 519 NFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQ 578
Query: 105 EMI-QRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKK 163
+I ++ YN+II GF +G D A + E+S + + T T LI CK
Sbjct: 579 NLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKS 638
Query: 164 GMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFR 222
+ A EM ++M+ + + ALI+G CK + A+ LF ++ E+G P
Sbjct: 639 NRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMP----- 693
Query: 223 LAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAG 282
+VS SL ++ + ++ YK ++ + G+ D+ TY +I+ K G
Sbjct: 694 ------NVSVYNSLISGFRNLGKMDAAIDLYK---KMVNDGISCDLFTYTTMIDGLLKDG 744
Query: 283 NMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYK 342
N+N A L+ +L G+ PD + + L++GL + + A K+ + M K P+ +Y
Sbjct: 745 NINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYS 804
Query: 343 ALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEVERA 391
++ R ++ AF L+ E L+ D+ N L + G VE+
Sbjct: 805 TVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLL----VSGRVEKP 849
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 150/323 (46%), Gaps = 52/323 (16%)
Query: 4 RRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNE 63
+R+ ++N +++GF K G + AV R + +G+ + ++SLI+GF K+ R +
Sbjct: 584 KRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDL 643
Query: 64 AHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIK 123
A + M + D+ Y ++ G + + A +F+E+ + GL+P+ YN++I
Sbjct: 644 ALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLIS 703
Query: 124 GFCDIGQLDHARSLHVEISGHDGLH-DTCTHTILICEMCKKGMVREAQEMFNQMEKLGCF 182
GF ++G++D A L+ ++ +DG+ D T+T +I + K G + A ++++++ LG
Sbjct: 704 GFRNLGKMDAAIDLYKKMV-NDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIV 762
Query: 183 PSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEH 242
P + L+NGL K G
Sbjct: 763 PDEILHMVLVNGLSKKG------------------------------------------- 779
Query: 243 MCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPD 302
Q L A K+L ++ V P++ Y+ +I + GN+N AF+L ++ KG+ D
Sbjct: 780 -----QFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHD 834
Query: 303 SVTYGTLIDGLYRVEREEDAFKI 325
+ L+ G RVE+ A KI
Sbjct: 835 DTVFNLLVSG--RVEKPPAASKI 855
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 110/477 (23%), Positives = 214/477 (44%), Gaps = 43/477 (9%)
Query: 12 TFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLS--GYSSLIDGFFKARRYNEAHSLYG 69
T+ ++ F K+G +EEAV ++ E G GI +S +SL++G+ K +A L+
Sbjct: 312 TYTSVIVAFVKEGNMEEAVRVMD--EMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFN 369
Query: 70 RMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIG 129
RM + G+ PD +++++M+ + +A++ + M + P + + +I+G
Sbjct: 370 RMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAE 429
Query: 130 QLDHARSLHVEISGHDGLHDTCTHTILICEM----CKKGMVREAQEMFNQMEKLGCFPSA 185
+ A + +D H + ++ CK+G V A ME+ G P+
Sbjct: 430 SPEAALEIF-----NDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNV 484
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLF---------------------FRL 223
V +N ++ C+ +D A +F +M E G P+ F
Sbjct: 485 VFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQ 544
Query: 224 AQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQL-ADSGVVPDIKTYNILINSFCKAG 282
S+ ++ V + +C+ GQT A ++L L + +YN +I+ F K G
Sbjct: 545 MNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVG 604
Query: 283 NMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYK 342
+ + A + ++++ G SP+ VT+ +LI+G + R + A ++ M + Y
Sbjct: 605 DTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYG 664
Query: 343 ALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSI-NALEEYFMK-GEVERAIRGLLELDF 400
AL+ C+ + A++L+ E L L N S+ N+L F G+++ AI ++
Sbjct: 665 ALIDGFCKKNDMKTAYTLFSE-LPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVN 723
Query: 401 RFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVH--LISGLCAK 455
+L Y+ ++ G + ++ A ++S L ++ I P +H L++GL K
Sbjct: 724 DGISCDLFTYTTMIDGLLKDGNINLASDLYSEL--LDLGIVPDEILHMVLVNGLSKK 778
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 174/355 (49%), Gaps = 19/355 (5%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
+L T+ L++ C+ GK++E L+R LE +G YS+ I G+FK +A
Sbjct: 206 NLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQD 265
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
M++ G+ DV+ Y+I++ GLS EG V EA+ + +MI+ G+ P+ Y AII+G C +
Sbjct: 266 REMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKM 325
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
G+L+ A L I D + LI +C+KG + A M ME+ G PS +T+
Sbjct: 326 GKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTY 385
Query: 189 NALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQ 248
N +INGLC AG++ EA E+ K V D ++ ++ +
Sbjct: 386 NTVINGLCMAGRVSEAD------EVSKGV------------VGDVITYSTLLDSYIKVQN 427
Query: 249 TLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGT 308
++ + ++ + D+ NIL+ +F G A L++ + L+PD+ TY T
Sbjct: 428 IDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYAT 487
Query: 309 LIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLE 363
+I G + + E+A ++ + + K + Y ++ LC+ + A + +E
Sbjct: 488 MIKGYCKTGQIEEALEMFNELRKSSVSAA-VCYNRIIDALCKKGMLDTATEVLIE 541
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 123/517 (23%), Positives = 209/517 (40%), Gaps = 96/517 (18%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R Q + T+N ++NG C G++ EA + + + D + YS+L+D + K +
Sbjct: 373 MEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGD-----VITYSTLLDSYIKVQN 427
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+ + R ++ I D+++ I+L+ G GEA ++ M + L PD Y
Sbjct: 428 IDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYAT 487
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+IKG+C GQ++ A + E+ C + I I +CKKGM+ A E+ ++ + G
Sbjct: 488 MIKGYCKTGQIEEALEMFNELRKSSVSAAVCYNRI-IDALCKKGMLDTATEVLIELWEKG 546
Query: 181 CFPSAVTFNALI-----NG------------------------------LCKAGKLDEAH 205
+ T L+ NG LCK G + A
Sbjct: 547 LYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAI 606
Query: 206 LLFYKME----IGKSPSLFFR---------------LAQGSDHVS--DSVSLQKKVEHMC 244
++ M PS + + G +S D + + +C
Sbjct: 607 EVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLC 666
Query: 245 EAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSV 304
+ G + A L + GV + TYN LIN C+ G + A +LF L+ GL P V
Sbjct: 667 KEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEV 726
Query: 305 TYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEY 364
TYG LID L + DA K+ D M+ P+ +Y +++ C+
Sbjct: 727 TYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCK-------------- 772
Query: 365 LKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVD 424
G+ D++ V R + G + D S ++ G+C+ ++
Sbjct: 773 ----LGQTEDAMRV---------VSRKMMGRVTPD-------AFTVSSMIKGYCKKGDME 812
Query: 425 EALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDA 461
EAL +F+ + NI+ + + LI G C K + +A
Sbjct: 813 EALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEA 849
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 118/498 (23%), Positives = 216/498 (43%), Gaps = 85/498 (17%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M + RD+ ++++L++G K+G +EEA+ LL + ++G L Y+++I G K +
Sbjct: 268 MVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGK 327
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
EA L+ R++ GI D LY ++ G+ +G + A M +M QRG+ P YN
Sbjct: 328 LEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNT 387
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHT-------------------------I 155
+I G C G++ A + + G + T + +
Sbjct: 388 VINGLCMAGRVSEADEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDL 447
Query: 156 LICEMCKK-----GMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYK 210
++C + K G EA ++ M ++ P T+ +I G CK G+++EA +F
Sbjct: 448 VMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFN- 506
Query: 211 MEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKT 270
E+ KS VS +V + ++ +C+ G A ++L +L + G+ DI T
Sbjct: 507 -ELRKS------------SVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHT 553
Query: 271 YNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHML 330
L++S G G L L+ L+ D V G L D + + +
Sbjct: 554 SRTLLHSIHANGGDKGILGLVYGLE--QLNSD-VCLGMLNDAILLLCK------------ 598
Query: 331 KHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFM---KGE 387
+ E + VY + R K +++ F + LK+L D++ +L+ Y + GE
Sbjct: 599 RGSFEAAIEVY-----MIMRRKGLTVTFPSTI--LKTLV----DNLRSLDAYLLVVNAGE 647
Query: 388 VERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVH 447
++ Y+I++ G C+ + +AL + S + +N +
Sbjct: 648 T------------TLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNS 695
Query: 448 LISGLCAKRNLYDAVVIF 465
LI+GLC + L +A+ +F
Sbjct: 696 LINGLCQQGCLVEALRLF 713
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 133/255 (52%), Gaps = 4/255 (1%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D+ + +++NG CK+G L +A++L + G + Y+SLI+G + EA L+
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
+ G++P + Y I++ L EG +A K+ M+ +GL+P+ YN+I+ G+C +
Sbjct: 714 DSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKL 773
Query: 129 GQLDHA-RSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVT 187
GQ + A R + ++ G D T + +I CKKG + EA +F + +
Sbjct: 774 GQTEDAMRVVSRKMMGR-VTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFG 832
Query: 188 FNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAG 247
F LI G C G+++EA L +M + S S+ + + +++S S++ + +CE G
Sbjct: 833 FLFLIKGFCTKGRMEEARGLLREMLV--SESVVKLINRVDAELAESESIRGFLVELCEQG 890
Query: 248 QTLNAYKLLTQLADS 262
+ A K+L +++ +
Sbjct: 891 RVPQAIKILDEISST 905
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 177/404 (43%), Gaps = 26/404 (6%)
Query: 33 LRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSN 92
L+ L + G L+ + ++ +++N Y ++ I + +Y+I+ N
Sbjct: 14 LQSLLKSGFSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQININHRIYSIVSWAFLN 73
Query: 93 EGRVGEAVKMFAEMIQRG-LLPDAHCYNAIIKGFCDIGQLDHARSLHVE---ISGHDGLH 148
R +A K I + + P H +++I GF I + D ++ L + + H
Sbjct: 74 LNRYEDAEKFINIHISKASIFPRTHMLDSLIHGF-SITRDDPSKGLLILRDCLRNHGAFP 132
Query: 149 DTCTHTILICEMCKKGMVREAQEMFNQMEKLGC-FP-SAVTFNALINGLCKAGKLDEAHL 206
+ T LI +KG + A E+ M +P +A+I+G CK GK + A
Sbjct: 133 SSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELA-- 190
Query: 207 LFYKMEIGKSPSLFFRLAQGSDH-VSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVV 265
+G FF A S V + V+ V +C+ G+ L+ +L D G
Sbjct: 191 ------LG-----FFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFE 239
Query: 266 PDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKI 325
D Y+ I+ + K G + A +++ KG++ D V+Y LIDGL + E+A +
Sbjct: 240 FDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGL 299
Query: 326 RDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDS---INALEEY 382
M+K EP+ Y A++ LC+ K+ AF L+ L G + D + ++
Sbjct: 300 LGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSV--GIEVDEFLYVTLIDGI 357
Query: 383 FMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEA 426
KG + RA L +++ R ++ Y+ ++ G C A +V EA
Sbjct: 358 CRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA 401
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 167/348 (47%), Gaps = 24/348 (6%)
Query: 11 ATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGR 70
T+ L+NG KQ + +AV LL +E G + YS LI G FK + EA SL+ +
Sbjct: 328 VTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRK 387
Query: 71 MIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQ 130
M + G P++++Y++++ GL EG+ EA ++ MI G LP+A+ Y++++KGF G
Sbjct: 388 MAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGL 447
Query: 131 LDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNA 190
+ A + E+ + +++LI +C G V+EA ++++M +G P V +++
Sbjct: 448 CEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSS 507
Query: 191 LINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTL 250
+I GLC G +D A L+++M + P D V+ ++ +C
Sbjct: 508 IIKGLCGIGSMDAALKLYHEMLCQEEPK----------SQPDVVTYNILLDGLCMQKDIS 557
Query: 251 NAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLI 310
A LL + D G PD+ T N +N+ + N + F + L+
Sbjct: 558 RAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLE--------------ELV 603
Query: 311 DGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAF 358
L + +R A I + ML P + + ++ +C+ KKI+ A
Sbjct: 604 VRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAI 651
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 119/462 (25%), Positives = 202/462 (43%), Gaps = 52/462 (11%)
Query: 12 TFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYS--SLIDGFFKARRYNEAHSLYG 69
+FN+++ CK ++ A+ + R + R GY+ +L+DG K R +EA L
Sbjct: 189 SFNLVIKALCKLRFVDRAIEVFRGMPE--RKCLPDGYTYCTLMDGLCKEERIDEAVLLLD 246
Query: 70 RMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIG 129
M G P ++Y +++ GL +G + K+ M +G +P+ YN +I G C G
Sbjct: 247 EMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKG 306
Query: 130 QLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFN 189
+LD A SL + + + T+ LI + K+ +A + + ME+ G + ++
Sbjct: 307 KLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYS 366
Query: 190 ALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQ 248
LI+GL K GK +EA L+ KM E G P++ V V+ +C G+
Sbjct: 367 VLISGLFKEGKAEEAMSLWRKMAEKGCKPNI--------------VVYSVLVDGLCREGK 412
Query: 249 TLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGT 308
A ++L ++ SG +P+ TY+ L+ F K G A +++K++ G S + Y
Sbjct: 413 PNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSV 472
Query: 309 LIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYL-KS 367
LIDGL V R ++A + ML +P Y +++ LC + A LY E L +
Sbjct: 473 LIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQE 532
Query: 368 LPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEAL 427
P D + Y+ILL G C K + A+
Sbjct: 533 EPKSQPDVVT--------------------------------YNILLDGLCMQKDISRAV 560
Query: 428 IIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSL 469
+ + + + + + +C ++ L K N D FL L
Sbjct: 561 DLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEEL 602
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 119/505 (23%), Positives = 222/505 (43%), Gaps = 56/505 (11%)
Query: 12 TFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIR-LSGYSSLIDGFFKARRYNEAHSLYGR 70
+F V+ + K ++AV L + + R R + ++S+++ Y+ Y
Sbjct: 114 SFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDY 173
Query: 71 MIKGG----ILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
++ I P+ + + ++++ L V A+++F M +R LPD + Y ++ G C
Sbjct: 174 VVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLC 233
Query: 127 DIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAV 186
++D A L E+ + +LI +CKKG + ++ + M GC P+ V
Sbjct: 234 KEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEV 293
Query: 187 TFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEA 246
T+N LI+GLC GKLD+A L +M S + + V+ + + +
Sbjct: 294 TYNTLIHGLCLKGKLDKAVSLLERM-------------VSSKCIPNDVTYGTLINGLVKQ 340
Query: 247 GQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTY 306
+ +A +LL+ + + G + Y++LI+ K G A L++ + KG P+ V Y
Sbjct: 341 RRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVY 400
Query: 307 GTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLK 366
L+DGL R + +A +I + M+ C P+ Y +LM
Sbjct: 401 SVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLM--------------------- 439
Query: 367 SLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEA 426
+ +F G E A++ E+D N YS+L+ G C +V EA
Sbjct: 440 -------------KGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEA 486
Query: 427 LIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSL-DKGFELGPKICKE--L 483
++++S + I + + +I GLC ++ A+ ++ L + + P + L
Sbjct: 487 MMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNIL 546
Query: 484 LECLLVSQDKRKYAIDLIGRMKSRG 508
L+ L + +D + A+DL+ M RG
Sbjct: 547 LDGLCMQKDISR-AVDLLNSMLDRG 570
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 175/387 (45%), Gaps = 53/387 (13%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDG------ 54
M R+ D T+ L++G CK+ +++EAV LL ++ +G Y+ LIDG
Sbjct: 213 MPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGD 272
Query: 55 -----------FFKARRYNE------------------AHSLYGRMIKGGILPDVILYAI 85
F K NE A SL RM+ +P+ + Y
Sbjct: 273 LTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGT 332
Query: 86 MLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHD 145
++ GL + R +AV++ + M +RG + H Y+ +I G G+ + A SL +++
Sbjct: 333 LINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKG 392
Query: 146 GLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAH 205
+ +++L+ +C++G EA+E+ N+M GC P+A T+++L+ G K G +EA
Sbjct: 393 CKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAV 452
Query: 206 LLFYKME-IGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGV 264
++ +M+ G S + F ++ +C G+ A + +++ G+
Sbjct: 453 QVWKEMDKTGCSRNKF--------------CYSVLIDGLCGVGRVKEAMMVWSKMLTIGI 498
Query: 265 VPDIKTYNILINSFCKAGNMNGAFKLFKDL---QLKGLSPDSVTYGTLIDGLYRVEREED 321
PD Y+ +I C G+M+ A KL+ ++ + PD VTY L+DGL +
Sbjct: 499 KPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISR 558
Query: 322 AFKIRDHMLKHVCEPSFAVYKALMTWL 348
A + + ML C+P + L
Sbjct: 559 AVDLLNSMLDRGCDPDVITCNTFLNTL 585
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 177/385 (45%), Gaps = 31/385 (8%)
Query: 1 MWMRRFQRDL----ATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFF 56
+W+ +R++ T+N+L+NGF K GK+EEA + R G + ++ LI+G+
Sbjct: 260 IWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYC 319
Query: 57 KARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAH 116
K +++A + M+ GI P Y I + L + GR+ +A ++ + M PD
Sbjct: 320 KQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVV 375
Query: 117 CYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQM 176
YN ++ G+ +G+ A L ++ D T+ LI +C+ G + AQ + +M
Sbjct: 376 SYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEM 435
Query: 177 EKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLF--------------- 220
FP +T+ L+ G K G L A ++ +M G P +
Sbjct: 436 TTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDS 495
Query: 221 ---FRLAQ---GSDHVSDSVSLQK-KVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNI 273
FRL + +DH + +++ +++ +C+ G + A + ++ G+VPD TY
Sbjct: 496 DKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTT 555
Query: 274 LINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHV 333
+I + + G A L+ ++ K L P +TY LI G + R E AF+ M K
Sbjct: 556 VIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRG 615
Query: 334 CEPSFAVYKALMTWLCRGKKISLAF 358
P+ + AL+ +C+ I A+
Sbjct: 616 VRPNVMTHNALLYGMCKAGNIDEAY 640
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 118/470 (25%), Positives = 200/470 (42%), Gaps = 66/470 (14%)
Query: 48 YSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMI 107
+++++D FKA ++ M + I + Y I++ G S G++ EA + +M
Sbjct: 241 FNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMR 300
Query: 108 QRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVR 167
+ G + +N +I+G+C G D A + E+ T T+ I IC +C G +
Sbjct: 301 RSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRID 360
Query: 168 EAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGK-SPSLFFRLAQG 226
+A+E+ + M P V++N L++G K GK EA LLF + G PS+
Sbjct: 361 DARELLSSMAA----PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSI------- 409
Query: 227 SDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNG 286
V+ ++ +CE+G A +L ++ + PD+ TY L+ F K GN++
Sbjct: 410 -------VTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSM 462
Query: 287 AFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLK---HVCEPSFAVYKA 343
A +++ ++ KG+ PD Y T G R+ + AF++ + M+ H P +Y
Sbjct: 463 ATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHA--PDLTIYNV 520
Query: 344 LMTWLCRGKKISLAFSL----------------------YLE----------YLKSLPGR 371
+ LC+ + A YLE Y + L R
Sbjct: 521 RIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKR 580
Query: 372 DNDSINALEEYFM-------KGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVD 424
S+ YF+ G +E+A + E+ R N+ ++ LL G C+A +D
Sbjct: 581 LYPSVIT---YFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNID 637
Query: 425 EALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFE 474
EA ++E I N S LIS C + V ++ LDK E
Sbjct: 638 EAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIE 687
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 161/344 (46%), Gaps = 20/344 (5%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D+ ++N L++G+ K GK EA L L + Y++LIDG ++ A L
Sbjct: 373 DVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLK 432
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
M I PDVI Y +++G G + A +++ EM+++G+ PD + Y G +
Sbjct: 433 EEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRL 492
Query: 129 GQLDHARSLHVEISGHDG-LHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVT 187
G D A LH E+ D D + + I +CK G + +A E ++ ++G P VT
Sbjct: 493 GDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVT 552
Query: 188 FNALINGLCKAGKLDEAHLLFYKM---EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMC 244
+ +I G + G+ A L+ +M + S +F L G
Sbjct: 553 YTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGH----------------A 596
Query: 245 EAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSV 304
+AG+ A++ T++ GV P++ T+N L+ CKAGN++ A++ ++ +G+ P+
Sbjct: 597 KAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKY 656
Query: 305 TYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWL 348
+Y LI E+ E+ K+ ML EP ++AL L
Sbjct: 657 SYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHL 700
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 139/300 (46%), Gaps = 19/300 (6%)
Query: 68 YGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCD 127
+ +MI+ G LP V I+L+ L + + +A ++ MI+ G++P +N ++
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 128 IGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVT 187
G L+ + +E+ + T+ ILI K G + EA+ M + G + +
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310
Query: 188 FNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEA 246
FN LI G CK G D+A + +M G P+ + + + +C+
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPT--------------TSTYNIYICALCDF 356
Query: 247 GQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTY 306
G+ +A +LL+ +A PD+ +YN L++ + K G A LF DL+ + P VTY
Sbjct: 357 GRIDDARELLSSMA----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTY 412
Query: 307 GTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLK 366
TLIDGL E A ++++ M + P Y L+ + +S+A +Y E L+
Sbjct: 413 NTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLR 472
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 64/123 (52%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M +R + T+ VL+ G K G+LE+A +++ G + +++L+ G KA
Sbjct: 576 MLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGN 635
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+EA+ +M + GI P+ Y +++ + + E VK++ EM+ + + PD + + A
Sbjct: 636 IDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRA 695
Query: 121 IIK 123
+ K
Sbjct: 696 LFK 698
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 120/466 (25%), Positives = 205/466 (43%), Gaps = 89/466 (19%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D+ NVL++ FCK G+L A+SLLR N S+
Sbjct: 128 DVFALNVLIHSFCKVGRLSFAISLLR---------------------------NRVISI- 159
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
D + Y ++ GL G EA + +EM++ G+LPD YN +I GFC +
Sbjct: 160 ----------DTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKV 209
Query: 129 GQLDHARSLHVEIS------------GHDGLH----------------DTCTHTILICEM 160
G A++L EIS + LH D T + +I +
Sbjct: 210 GNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRL 269
Query: 161 CKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSP--- 217
CK G V E + +ME++ +P+ VT+ L++ L KA A L+ +M + P
Sbjct: 270 CKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDL 329
Query: 218 --------SLF-----------FRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQ 258
LF F++ + V + V+ V+ +C+AG +A ++TQ
Sbjct: 330 VVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQ 389
Query: 259 LADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVER 318
+ + V+P++ TY+ +IN + K G + A L + ++ + + P+ TYGT+IDGL++ +
Sbjct: 390 MLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGK 449
Query: 319 EEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINA 378
EE A ++ M E + + AL+ L R +I L + + D + +
Sbjct: 450 EEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTS 509
Query: 379 LEEYFMK-GEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKV 423
L + F K G+ E A+ E+ R +++ Y++L+ G + KV
Sbjct: 510 LIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV 555
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 122/458 (26%), Positives = 208/458 (45%), Gaps = 23/458 (5%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M M F D+ TF+ ++N CK GK+ E LLR +E Y++L+D FKA
Sbjct: 250 MVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANI 309
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
Y A +LY +M+ GI D+++Y +++ GL G + EA K F +++ +P+ Y A
Sbjct: 310 YRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTA 369
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
++ G C G L A + ++ + + T++ +I KKGM+ EA + +ME
Sbjct: 370 LVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQN 429
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKV 240
P+ T+ +I+GL KAGK + A +E+ K L + ++++ D++ V
Sbjct: 430 VVPNGFTYGTVIDGLFKAGKEEMA------IELSKEMRLIG--VEENNYILDAL-----V 476
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLS 300
H+ G+ L+ + GV D Y LI+ F K G+ A +++Q +G+
Sbjct: 477 NHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMP 536
Query: 301 PDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSL 360
D V+Y LI G+ + + + + K + EP A + +M R + S
Sbjct: 537 WDVVSYNVLISGMLKFGKVGADWAYKGMREKGI-EPDIATFNIMMNSQ-RKQGDSEGILK 594
Query: 361 YLEYLKSLPGRD-----NDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLI 415
+ +KS + N + L E G++E AI L ++ NL Y I L
Sbjct: 595 LWDKMKSCGIKPSLMSCNIVVGMLCE---NGKMEEAIHILNQMMLMEIHPNLTTYRIFLD 651
Query: 416 GFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLC 453
+ K+ D L + I ++ LI+ LC
Sbjct: 652 TSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLC 689
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 118/487 (24%), Positives = 215/487 (44%), Gaps = 62/487 (12%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
++ T++ ++NG+ K+G LEEAVSLLR +E Y ++IDG FKA + A L
Sbjct: 398 NVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELS 457
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
M G+ + + ++ L GR+ E + +M+ +G+ D Y ++I F
Sbjct: 458 KEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKG 517
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCK----------KGMVREAQE------- 171
G + A + E+ D ++ +LI M K KGM + E
Sbjct: 518 GDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPDIATFN 577
Query: 172 -----------------MFNQMEKLGCFPSAVTFNALINGLCKAGKLDEA-HLLFYKMEI 213
++++M+ G PS ++ N ++ LC+ GK++EA H+L M +
Sbjct: 578 IMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLM 637
Query: 214 GKSPSLF-FRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYN 272
P+L +R+ D+ S K+ + + + +TL +Y G+ + YN
Sbjct: 638 EIHPNLTTYRI------FLDTSSKHKRADAIFKTHETLLSY---------GIKLSRQVYN 682
Query: 273 ILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKH 332
LI + CK G A + D++ +G PD+VT+ +L+ G + A M++
Sbjct: 683 TLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEA 742
Query: 333 VCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDND-SINALEEYFMKGEVERA 391
P+ A Y ++ L I +L +KS R +D + NAL + G+ +
Sbjct: 743 GISPNVATYNTIIRGLSDAGLIK-EVDKWLSEMKSRGMRPDDFTYNAL----ISGQAKIG 797
Query: 392 -IRGLLELDFRFRDFNLAP----YSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCV 446
++G + + L P Y++L+ F K+ +A + + + ++ N ++
Sbjct: 798 NMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYC 857
Query: 447 HLISGLC 453
+ISGLC
Sbjct: 858 TMISGLC 864
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 100/186 (53%)
Query: 12 TFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRM 71
+N L+ CK G ++A ++ +E G ++SL+ G+F +A S Y M
Sbjct: 680 VYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVM 739
Query: 72 IKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQL 131
++ GI P+V Y ++RGLS+ G + E K +EM RG+ PD YNA+I G IG +
Sbjct: 740 MEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNM 799
Query: 132 DHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNAL 191
+ +++ E+ + T T+ +LI E G + +A+E+ +M K G P+ T+ +
Sbjct: 800 KGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTM 859
Query: 192 INGLCK 197
I+GLCK
Sbjct: 860 ISGLCK 865
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 139/318 (43%), Gaps = 15/318 (4%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
+ D+ATFN+++N KQG E + L ++ G L + ++ + + EA
Sbjct: 569 IEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAI 628
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
+ +M+ I P++ Y I L S R K ++ G+ YN +I
Sbjct: 629 HILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATL 688
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
C +G A + ++ + DT T L+ VR+A ++ M + G P+
Sbjct: 689 CKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNV 748
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKMEI-GKSPSLFFRLAQGSDHVSDSVSLQKKVEHMC 244
T+N +I GL AG + E +M+ G P F A +S Q K+
Sbjct: 749 ATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNAL--------ISGQAKI---- 796
Query: 245 EAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSV 304
G + + ++ G+VP TYN+LI+ F G M A +L K++ +G+SP++
Sbjct: 797 --GNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTS 854
Query: 305 TYGTLIDGLYRVEREEDA 322
TY T+I GL ++ D
Sbjct: 855 TYCTMISGLCKLCTHPDV 872
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 157/378 (41%), Gaps = 51/378 (13%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D + L++ F K G E A++ ++ G + Y+ LI G K + A Y
Sbjct: 503 DQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVG-ADWAY 561
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
M + GI PD+ + IM+ +G +K++ +M G+ P N ++ C+
Sbjct: 562 KGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCEN 621
Query: 129 GQLDHA---------RSLHVEISGHDGLHDTCT--------------------------H 153
G+++ A +H ++ + DT + +
Sbjct: 622 GKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVY 681
Query: 154 TILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLF-YKME 212
LI +CK GM ++A + ME G P VTFN+L++G + +A + ME
Sbjct: 682 NTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMME 741
Query: 213 IGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYN 272
G SP++ + + + +AG K L+++ G+ PD TYN
Sbjct: 742 AGISPNV--------------ATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYN 787
Query: 273 ILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKH 332
LI+ K GNM G+ ++ ++ GL P + TY LI V + A ++ M K
Sbjct: 788 ALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKR 847
Query: 333 VCEPSFAVYKALMTWLCR 350
P+ + Y +++ LC+
Sbjct: 848 GVSPNTSTYCTMISGLCK 865
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/446 (22%), Positives = 183/446 (41%), Gaps = 62/446 (13%)
Query: 95 RVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHT 154
R+ A + + M G++PD+ +N++I F ++G +HD
Sbjct: 73 RLYGAARTLSAMCTFGVVPDSRLWNSLIHQF--------------NVNGL--VHD----- 111
Query: 155 ILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIG 214
+ ++++M G P N LI+ CK G+L A L I
Sbjct: 112 -------------QVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVIS 158
Query: 215 KSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNIL 274
D+V+ + +CE G AY+ L+++ G++PD +YN L
Sbjct: 159 ----------------IDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTL 202
Query: 275 INSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVC 334
I+ FCK GN A L ++ L +T+ L+ Y + E+A+ RD M+
Sbjct: 203 IDGFCKVGNFVRAKALVDEISELNL----ITHTILLSSYYNLHAIEEAY--RD-MVMSGF 255
Query: 335 EPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDND-SINALEEYFMKGEVERAIR 393
+P + +++ LC+G K+ L L L ++ + N + L + K + R
Sbjct: 256 DPDVVTFSSIINRLCKGGKV-LEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHAL 314
Query: 394 GLL-ELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGL 452
L ++ R +L Y++L+ G +A + EA F +L E N N + L+ GL
Sbjct: 315 ALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGL 374
Query: 453 CAKRNLYDAVVIFLYSLDKGFELGPKICKELLECLLVSQDKRKYAIDLIGRMKSRGYRLH 512
C +L A I L+K ++ V + + A+ L+ +M+ + +
Sbjct: 375 CKAGDLSSAEFIITQMLEKSVIPNVVTYSSMING-YVKKGMLEEAVSLLRKMEDQNVVPN 433
Query: 513 KYQYRQTI-SLLQQLQEGKAVKLFSE 537
+ Y I L + +E A++L E
Sbjct: 434 GFTYGTVIDGLFKAGKEEMAIELSKE 459
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 170/359 (47%), Gaps = 52/359 (14%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D+ TF L+NG C +G++ +A++L+ + +G Y ++I+G K A +L
Sbjct: 9 DVVTFTTLMNGLCCEGRVLQALALVDRMVEEGH----QPYGTIINGLCKMGDTESALNLL 64
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
+M + I V++Y ++ L +G A +F EM +G+ PD Y+ +I FC
Sbjct: 65 SKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRS 124
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
G+ A L ++ D T + LI + K+G V EA+E++ M + G FP+ +T+
Sbjct: 125 GRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITY 184
Query: 189 NALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQ 248
N++I+G CK +L++A
Sbjct: 185 NSMIDGFCKQDRLNDAK------------------------------------------- 201
Query: 249 TLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGT 308
++L +A PD+ T++ LIN +CKA ++ ++F ++ +G+ ++VTY T
Sbjct: 202 -----RMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTT 256
Query: 309 LIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKS 367
LI G +V + A + + M+ P++ +++++ LC K++ AF++ + KS
Sbjct: 257 LIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKS 315
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 166/395 (42%), Gaps = 86/395 (21%)
Query: 71 MIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQ 130
M++ G PDV+ + ++ GL EGRV +A+ + M++ G P Y II G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIING------ 50
Query: 131 LDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNA 190
+CK G A + ++ME+ V +NA
Sbjct: 51 -----------------------------LCKMGDTESALNLLSKMEETHIKAHVVIYNA 81
Query: 191 LINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTL 250
+I+ LCK G A LF +M +F D ++ ++ C +G+
Sbjct: 82 IIDRLCKDGHHIHAQNLFTEMH---DKGIF----------PDVITYSGMIDSFCRSGRWT 128
Query: 251 NAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLI 310
+A +LL + + + PD+ T++ LIN+ K G ++ A +++ D+ +G+ P ++TY ++I
Sbjct: 129 DAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMI 188
Query: 311 DGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPG 370
DG + +R DA ++ D M C P + L+ C+ K++ ++ E +
Sbjct: 189 DGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR---- 244
Query: 371 RDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIF 430
RG++ N Y+ L+ GFCQ +D A +
Sbjct: 245 ----------------------RGIVA--------NTVTYTTLIHGFCQVGDLDAAQDLL 274
Query: 431 SVLDEFNININPTSCVHLISGLCAKRNLYDAVVIF 465
+V+ + N + +++ LC+K+ L A I
Sbjct: 275 NVMISSGVAPNYITFQSMLASLCSKKELRKAFAIL 309
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 154/338 (45%), Gaps = 20/338 (5%)
Query: 176 MEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSV 234
M + GC P VTF L+NGLC G++ +A L +M E G P + + G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP--YGTIING-------- 50
Query: 235 SLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDL 294
+C+ G T +A LL+++ ++ + + YN +I+ CK G+ A LF ++
Sbjct: 51 --------LCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEM 102
Query: 295 QLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKI 354
KG+ PD +TY +ID R R DA ++ M++ P + AL+ L + K+
Sbjct: 103 HDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKV 162
Query: 355 SLAFSLYLEYLKSLPGRDNDSINALEEYFMKGE-VERAIRGLLELDFRFRDFNLAPYSIL 413
S A +Y + L+ + N++ + F K + + A R L + + ++ +S L
Sbjct: 163 SEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTL 222
Query: 414 LIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGF 473
+ G+C+AK+VD + IF + I N + LI G C +L A + + G
Sbjct: 223 INGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGV 282
Query: 474 ELGPKICKELLECLLVSQDKRKYAIDLIGRMKSRGYRL 511
+ +L L ++ RK L KS G+ L
Sbjct: 283 APNYITFQSMLASLCSKKELRKAFAILEDLQKSEGHHL 320
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 35/212 (16%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R+ D+ TF+ L+N K+GK+ EA + + R G Y+S+IDGF K R
Sbjct: 137 MIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDR 196
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
N+A + M PDV+ ++ ++ G RV +++F EM +RG++ + Y
Sbjct: 197 LNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTT 256
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I GFC +G LD AQ++ N M G
Sbjct: 257 LIHGFCQVGDLD-----------------------------------AAQDLLNVMISSG 281
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKME 212
P+ +TF +++ LC +L +A + ++
Sbjct: 282 VAPNYITFQSMLASLCSKKELRKAFAILEDLQ 313
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 70/137 (51%)
Query: 12 TFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRM 71
T+N +++GFCKQ +L +A +L + + +S+LI+G+ KA+R + ++ M
Sbjct: 183 TYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 242
Query: 72 IKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQL 131
+ GI+ + + Y ++ G G + A + MI G+ P+ + +++ C +L
Sbjct: 243 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKEL 302
Query: 132 DHARSLHVEISGHDGLH 148
A ++ ++ +G H
Sbjct: 303 RKAFAILEDLQKSEGHH 319
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 189/397 (47%), Gaps = 20/397 (5%)
Query: 16 LLNGFCKQGKLEEAVSLL-RLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKG 74
L++ F ++GKL A +LL + E +G + ++ SL++ K R +A L+ ++
Sbjct: 144 LVSSFAEKGKLHFATALLLQSFEVEGCCMVVN---SLLNTLVKLDRVEDAMKLFDEHLRF 200
Query: 75 GILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHA 134
D + I++RGL G+ +A+++ M G PD YN +I+GFC +L+ A
Sbjct: 201 QSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKA 260
Query: 135 RSLHVEI-SGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALIN 193
+ ++ SG D T+T +I CK G +REA + + M +LG +P+ VTFN L++
Sbjct: 261 SEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVD 320
Query: 194 GLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNA 252
G KAG++ A + KM G P D V+ ++ C GQ
Sbjct: 321 GYAKAGEMLTAEEIRGKMISFGCFP--------------DVVTFTSLIDGYCRVGQVSQG 366
Query: 253 YKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDG 312
++L ++ G+ P+ TY+ILIN+ C + A +L L K + P Y +IDG
Sbjct: 367 FRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDG 426
Query: 313 LYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRD 372
+ + +A I + M K C+P + L+ C ++ A S++ + + D
Sbjct: 427 FCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPD 486
Query: 373 NDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAP 409
++++L +K + + L ++ + + N+ P
Sbjct: 487 KITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVP 523
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 153/324 (47%), Gaps = 16/324 (4%)
Query: 5 RFQ--RDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYN 62
RFQ D TFN+L+ G C GK E+A+ LL ++ G + Y++LI GF K+ N
Sbjct: 199 RFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELN 258
Query: 63 EAHSLYGRMIKGGIL-PDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAI 121
+A ++ + G + PDV+ Y M+ G G++ EA + +M++ G+ P +N +
Sbjct: 259 KASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVL 318
Query: 122 IKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGC 181
+ G+ G++ A + ++ D T T LI C+ G V + ++ +M G
Sbjct: 319 VDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGM 378
Query: 182 FPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVE 241
FP+A T++ LIN LC +L +A L ++ D + ++
Sbjct: 379 FPNAFTYSILINALCNENRLLKARELLGQL-------------ASKDIIPQPFMYNPVID 425
Query: 242 HMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSP 301
C+AG+ A ++ ++ PD T+ ILI C G M A +F + G SP
Sbjct: 426 GFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSP 485
Query: 302 DSVTYGTLIDGLYRVEREEDAFKI 325
D +T +L+ L + ++A+ +
Sbjct: 486 DKITVSSLLSCLLKAGMAKEAYHL 509
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 137/270 (50%), Gaps = 21/270 (7%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D+ T+ +++G+CK GK+ EA SLL + R G ++ L+DG+ KA A +
Sbjct: 276 DVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIR 335
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
G+MI G PDV+ + ++ G G+V + +++ EM RG+ P+A Y+ +I C+
Sbjct: 336 GKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNE 395
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
+L AR L +++ D + + +I CK G V EA + +MEK C P +TF
Sbjct: 396 NRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITF 455
Query: 189 NALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAG 247
LI G C G++ EA +F+KM IG SP D +++ + + +AG
Sbjct: 456 TILIIGHCMKGRMFEAVSIFHKMVAIGCSP--------------DKITVSSLLSCLLKAG 501
Query: 248 QTLNAYKLLTQLADSG----VVP-DIKTYN 272
AY L Q+A G VVP + KT N
Sbjct: 502 MAKEAYH-LNQIARKGQSNNVVPLETKTAN 530
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 115/459 (25%), Positives = 195/459 (42%), Gaps = 53/459 (11%)
Query: 48 YSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMI 107
Y+ L KA ++ A ++ M G+ P+ L ++ + +G++ A + +
Sbjct: 106 YNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSF 165
Query: 108 QRGLLPDAHC--YNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGM 165
+ + C N+++ + +++ A L E +DT T ILI +C G
Sbjct: 166 EV----EGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGK 221
Query: 166 VREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQ 225
+A E+ M GC P VT+N LI G CK+ +L++A +F ++ G S
Sbjct: 222 AEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCS------- 274
Query: 226 GSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMN 285
D V+ + C+AG+ A LL + G+ P T+N+L++ + KAG M
Sbjct: 275 -----PDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEML 329
Query: 286 GAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALM 345
A ++ + G PD VT+ +LIDG RV + F++ + M P+ Y L+
Sbjct: 330 TAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILI 389
Query: 346 TWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDF 405
LC ++ A E L L +D + + FM
Sbjct: 390 NALCNENRLLKA----RELLGQLASKD-----IIPQPFM--------------------- 419
Query: 406 NLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIF 465
Y+ ++ GFC+A KV+EA +I +++ + + LI G C K +++AV IF
Sbjct: 420 ----YNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIF 475
Query: 466 LYSLDKGFELGPKICKELLECLL-VSQDKRKYAIDLIGR 503
+ G LL CLL K Y ++ I R
Sbjct: 476 HKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIAR 514
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 93/194 (47%), Gaps = 4/194 (2%)
Query: 270 TYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHM 329
TYN+L S CKAG + A ++F+ ++ G+SP++ G L+ E+ + F +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSF--AEKGKLHFATALLL 162
Query: 330 LKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMK-GEV 388
E V +L+ L + ++ A L+ E+L+ D + N L G+
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 389 ERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNI-NINPTSCVH 447
E+A+ L + + ++ Y+ L+ GFC++ ++++A +F + ++ + + +
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTS 282
Query: 448 LISGLCAKRNLYDA 461
+ISG C + +A
Sbjct: 283 MISGYCKAGKMREA 296
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 189/397 (47%), Gaps = 20/397 (5%)
Query: 16 LLNGFCKQGKLEEAVSLL-RLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKG 74
L++ F ++GKL A +LL + E +G + ++ SL++ K R +A L+ ++
Sbjct: 144 LVSSFAEKGKLHFATALLLQSFEVEGCCMVVN---SLLNTLVKLDRVEDAMKLFDEHLRF 200
Query: 75 GILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHA 134
D + I++RGL G+ +A+++ M G PD YN +I+GFC +L+ A
Sbjct: 201 QSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKA 260
Query: 135 RSLHVEI-SGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALIN 193
+ ++ SG D T+T +I CK G +REA + + M +LG +P+ VTFN L++
Sbjct: 261 SEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVD 320
Query: 194 GLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNA 252
G KAG++ A + KM G P D V+ ++ C GQ
Sbjct: 321 GYAKAGEMLTAEEIRGKMISFGCFP--------------DVVTFTSLIDGYCRVGQVSQG 366
Query: 253 YKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDG 312
++L ++ G+ P+ TY+ILIN+ C + A +L L K + P Y +IDG
Sbjct: 367 FRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDG 426
Query: 313 LYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRD 372
+ + +A I + M K C+P + L+ C ++ A S++ + + D
Sbjct: 427 FCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPD 486
Query: 373 NDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAP 409
++++L +K + + L ++ + + N+ P
Sbjct: 487 KITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVP 523
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 153/324 (47%), Gaps = 16/324 (4%)
Query: 5 RFQ--RDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYN 62
RFQ D TFN+L+ G C GK E+A+ LL ++ G + Y++LI GF K+ N
Sbjct: 199 RFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELN 258
Query: 63 EAHSLYGRMIKGGIL-PDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAI 121
+A ++ + G + PDV+ Y M+ G G++ EA + +M++ G+ P +N +
Sbjct: 259 KASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVL 318
Query: 122 IKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGC 181
+ G+ G++ A + ++ D T T LI C+ G V + ++ +M G
Sbjct: 319 VDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGM 378
Query: 182 FPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVE 241
FP+A T++ LIN LC +L +A L ++ D + ++
Sbjct: 379 FPNAFTYSILINALCNENRLLKARELLGQL-------------ASKDIIPQPFMYNPVID 425
Query: 242 HMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSP 301
C+AG+ A ++ ++ PD T+ ILI C G M A +F + G SP
Sbjct: 426 GFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSP 485
Query: 302 DSVTYGTLIDGLYRVEREEDAFKI 325
D +T +L+ L + ++A+ +
Sbjct: 486 DKITVSSLLSCLLKAGMAKEAYHL 509
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 137/270 (50%), Gaps = 21/270 (7%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D+ T+ +++G+CK GK+ EA SLL + R G ++ L+DG+ KA A +
Sbjct: 276 DVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIR 335
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
G+MI G PDV+ + ++ G G+V + +++ EM RG+ P+A Y+ +I C+
Sbjct: 336 GKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNE 395
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
+L AR L +++ D + + +I CK G V EA + +MEK C P +TF
Sbjct: 396 NRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITF 455
Query: 189 NALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAG 247
LI G C G++ EA +F+KM IG SP D +++ + + +AG
Sbjct: 456 TILIIGHCMKGRMFEAVSIFHKMVAIGCSP--------------DKITVSSLLSCLLKAG 501
Query: 248 QTLNAYKLLTQLADSG----VVP-DIKTYN 272
AY L Q+A G VVP + KT N
Sbjct: 502 MAKEAYH-LNQIARKGQSNNVVPLETKTAN 530
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 115/459 (25%), Positives = 195/459 (42%), Gaps = 53/459 (11%)
Query: 48 YSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMI 107
Y+ L KA ++ A ++ M G+ P+ L ++ + +G++ A + +
Sbjct: 106 YNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSF 165
Query: 108 QRGLLPDAHC--YNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGM 165
+ + C N+++ + +++ A L E +DT T ILI +C G
Sbjct: 166 EV----EGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGK 221
Query: 166 VREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQ 225
+A E+ M GC P VT+N LI G CK+ +L++A +F ++ G S
Sbjct: 222 AEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCS------- 274
Query: 226 GSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMN 285
D V+ + C+AG+ A LL + G+ P T+N+L++ + KAG M
Sbjct: 275 -----PDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEML 329
Query: 286 GAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALM 345
A ++ + G PD VT+ +LIDG RV + F++ + M P+ Y L+
Sbjct: 330 TAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILI 389
Query: 346 TWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDF 405
LC ++ A E L L +D + + FM
Sbjct: 390 NALCNENRLLKA----RELLGQLASKD-----IIPQPFM--------------------- 419
Query: 406 NLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIF 465
Y+ ++ GFC+A KV+EA +I +++ + + LI G C K +++AV IF
Sbjct: 420 ----YNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIF 475
Query: 466 LYSLDKGFELGPKICKELLECLL-VSQDKRKYAIDLIGR 503
+ G LL CLL K Y ++ I R
Sbjct: 476 HKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIAR 514
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 93/194 (47%), Gaps = 4/194 (2%)
Query: 270 TYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHM 329
TYN+L S CKAG + A ++F+ ++ G+SP++ G L+ E+ + F +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSF--AEKGKLHFATALLL 162
Query: 330 LKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMK-GEV 388
E V +L+ L + ++ A L+ E+L+ D + N L G+
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 389 ERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNI-NINPTSCVH 447
E+A+ L + + ++ Y+ L+ GFC++ ++++A +F + ++ + + +
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTS 282
Query: 448 LISGLCAKRNLYDA 461
+ISG C + +A
Sbjct: 283 MISGYCKAGKMREA 296
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 161/355 (45%), Gaps = 13/355 (3%)
Query: 13 FNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMI 72
+N LL G+ K G L++A S++ +E+ G YS LID + A R+ A + M
Sbjct: 342 YNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEME 401
Query: 73 KGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLD 132
G + P+ +++ +L G + G + ++ EM G+ PD YN +I F LD
Sbjct: 402 AGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLD 461
Query: 133 HARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALI 192
HA + + D T LI CK G A+EMF ME+ GC P A T+N +I
Sbjct: 462 HAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMI 521
Query: 193 NGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNA 252
N + D+ L KM+ +QG + + V+ V+ ++G+ +A
Sbjct: 522 NSYGDQERWDDMKRLLGKMK-----------SQGI--LPNVVTHTTLVDVYGKSGRFNDA 568
Query: 253 YKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDG 312
+ L ++ G+ P YN LIN++ + G A F+ + GL P + +LI+
Sbjct: 569 IECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINA 628
Query: 313 LYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKS 367
R+ +AF + +M ++ +P Y LM L R K +Y E + S
Sbjct: 629 FGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMS 683
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 163/341 (47%), Gaps = 13/341 (3%)
Query: 5 RFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEA 64
+ + D+ N ++ GF K G +A+ LL + + G + + S+I + R EA
Sbjct: 264 KLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEA 323
Query: 65 HSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKG 124
+L+ + + GI P Y +L+G G + +A M +EM +RG+ PD H Y+ +I
Sbjct: 324 EALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDA 383
Query: 125 FCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPS 184
+ + G+ + AR + E+ D ++ + L+ +G ++ ++ +M+ +G P
Sbjct: 384 YVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPD 443
Query: 185 AVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMC 244
+N +I+ K LD A F +M L++G + D V+ ++ C
Sbjct: 444 RQFYNVVIDTFGKFNCLDHAMTTFDRM-----------LSEGIE--PDRVTWNTLIDCHC 490
Query: 245 EAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSV 304
+ G+ + A ++ + G +P TYNI+INS+ + +L ++ +G+ P+ V
Sbjct: 491 KHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVV 550
Query: 305 TYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALM 345
T+ TL+D + R DA + + M +PS +Y AL+
Sbjct: 551 THTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALI 591
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 145/330 (43%), Gaps = 48/330 (14%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
Q + F+ LL GF +G+ ++ +L+ ++ G Y+ +ID F K + A +
Sbjct: 406 QPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMT 465
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
+ RM+ GI PD + + ++ GR A +MF M +RG LP A YN +I +
Sbjct: 466 TFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYG 525
Query: 127 DIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAV 186
D + D + L ++ L + THT L+ K G +A E +M+ +G PS+
Sbjct: 526 DQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSST 585
Query: 187 TFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEA 246
+NALIN + G L E
Sbjct: 586 MYNALINAYAQRG-LSE------------------------------------------- 601
Query: 247 GQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTY 306
Q +NA++++T G+ P + N LIN+F + AF + + ++ G+ PD VTY
Sbjct: 602 -QAVNAFRVMTS---DGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTY 657
Query: 307 GTLIDGLYRVEREEDAFKIRDHMLKHVCEP 336
TL+ L RV++ + + + M+ C+P
Sbjct: 658 TTLMKALIRVDKFQKVPVVYEEMIMSGCKP 687
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 151/336 (44%), Gaps = 15/336 (4%)
Query: 12 TFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH--SLYG 69
T+N L+ + +E+A++L+ + +DG YS +I ++ + + LY
Sbjct: 199 TYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYK 258
Query: 70 RMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIG 129
+ + + DV L ++ G + G +A+++ GL +II D G
Sbjct: 259 EIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSG 318
Query: 130 QLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFN 189
+ A +L E+ T + L+ K G +++A+ M ++MEK G P T++
Sbjct: 319 RTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYS 378
Query: 190 ALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQT 249
LI+ AG+ + A ++ +ME G D +S + + + G+
Sbjct: 379 LLIDAYVNAGRWESARIVLKEMEAG-------------DVQPNSFVFSRLLAGFRDRGEW 425
Query: 250 LNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTL 309
+++L ++ GV PD + YN++I++F K ++ A F + +G+ PD VT+ TL
Sbjct: 426 QKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTL 485
Query: 310 IDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALM 345
ID + R A ++ + M + C P Y ++
Sbjct: 486 IDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMI 521
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 114/437 (26%), Positives = 193/437 (44%), Gaps = 18/437 (4%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R F D AT ++L C+ G + A+ R + G L ++SLIDG K
Sbjct: 243 MIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGS 302
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLL-PDAHCYN 119
+A + M++ G P+V + ++ GL G +A ++F ++++ P+ H Y
Sbjct: 303 IKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYT 362
Query: 120 AIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKL 179
++I G+C +L+ A L + + T+T LI CK G A E+ N M
Sbjct: 363 SMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDE 422
Query: 180 GCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKK 239
G P+ T+NA I+ LCK + EA+ L K F +D V+ ++ +Q++
Sbjct: 423 GFMPNIYTYNAAIDSLCKKSRAPEAYELLNKA---------FSCGLEADGVTYTILIQEQ 473
Query: 240 VEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGL 299
C+ A ++ +G D++ NILI +FC+ M + +LF+ + GL
Sbjct: 474 ----CKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGL 529
Query: 300 SPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFS 359
P TY ++I + + A K +M +H C P Y +L++ LC+ + A
Sbjct: 530 IPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACK 589
Query: 360 LYLEYL-KSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFC 418
LY + + L + + EY + + A+ L LD + + L+ C
Sbjct: 590 LYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLD---KKLWIRTVRTLVRKLC 646
Query: 419 QAKKVDEALIIFSVLDE 435
KKV A + F L E
Sbjct: 647 SEKKVGVAALFFQKLLE 663
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 115/483 (23%), Positives = 212/483 (43%), Gaps = 20/483 (4%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
Q+ +L F + G+L EAV ++ ++ G + +++ + A
Sbjct: 143 LQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAE 202
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
+++ M G++PD Y +M+ G +G++ EA + MIQRG +PD I+
Sbjct: 203 NVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTAL 262
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
C+ G ++ A ++ + T LI +CKKG +++A EM +M + G P+
Sbjct: 263 CENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNV 322
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCE 245
T ALI+GLCK G ++A LF +L + + + + + C+
Sbjct: 323 YTHTALIDGLCKRGWTEKAF------------RLFLKLVRSDTYKPNVHTYTSMIGGYCK 370
Query: 246 AGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVT 305
+ A L +++ + G+ P++ TY LIN CKAG+ A++L + +G P+ T
Sbjct: 371 EDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYT 430
Query: 306 YGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYL 365
Y ID L + R +A+++ + E Y L+ C+ I+ A + +
Sbjct: 431 YNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMN 490
Query: 366 KSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAP----YSILLIGFCQAK 421
K+ D N L F + + + L +L L P Y+ ++ +C+
Sbjct: 491 KTGFEADMRLNNILIAAFCRQKKMKESERLFQL---VVSLGLIPTKETYTSMISCYCKEG 547
Query: 422 KVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICK 481
+D AL F + + + LISGLC K + +A ++ +D+G P++ +
Sbjct: 548 DIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLS-PPEVTR 606
Query: 482 ELL 484
L
Sbjct: 607 VTL 609
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 122/463 (26%), Positives = 206/463 (44%), Gaps = 18/463 (3%)
Query: 12 TFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRM 71
T N +L + G +E A ++ + G S Y ++ G F+ + EA M
Sbjct: 184 TMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGM 243
Query: 72 IKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQL 131
I+ G +PD ++L L G V A+ F +MI G P+ + ++I G C G +
Sbjct: 244 IQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSI 303
Query: 132 DHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCF-PSAVTFNA 190
A + E+ + + THT LI +CK+G +A +F ++ + + P+ T+ +
Sbjct: 304 KQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTS 363
Query: 191 LINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTL 250
+I G CK KL+ A +LF +M K LF +V+ +L + C+AG
Sbjct: 364 MIGGYCKEDKLNRAEMLFSRM---KEQGLF-------PNVNTYTTL---INGHCKAGSFG 410
Query: 251 NAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLI 310
AY+L+ + D G +P+I TYN I+S CK A++L GL D VTY LI
Sbjct: 411 RAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILI 470
Query: 311 DGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLY--LEYLKSL 368
+ A M K E + L+ CR KK+ + L+ + L +
Sbjct: 471 QEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLI 530
Query: 369 PGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALI 428
P ++ + + + Y +G+++ A++ + + Y L+ G C+ VDEA
Sbjct: 531 PTKETYT-SMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACK 589
Query: 429 IFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDK 471
++ + + ++ + V L C KRN +I L LDK
Sbjct: 590 LYEAMIDRGLSPPEVTRVTLAYEYC-KRNDSANAMILLEPLDK 631
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 122/450 (27%), Positives = 199/450 (44%), Gaps = 38/450 (8%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
F+ TF V++ G+++ LL+ ++ G + S+I + + A
Sbjct: 72 FKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAV 131
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
++ R+ + G P V +Y +L L E R+ ++ +M + G P+ YN ++K
Sbjct: 132 EMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKAL 191
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
C ++D A+ L VE+S D ++T +I MC+ G+V+E +E+ + E P
Sbjct: 192 CKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFE-----PVV 246
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKM-EIGKSP-----SLFFRLAQGSDHVSDSVS-LQK 238
+NALINGLCK A L +M E G SP S + S + + S L +
Sbjct: 247 SVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQ 306
Query: 239 KVEHMCEA---------------GQTLNAYKLLTQLADS-GVVPDIKTYNILINSFCKAG 282
++ C G T +A L Q+ G+ P++ YN L+ FC G
Sbjct: 307 MLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHG 366
Query: 283 NMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYK 342
N+ A +F ++ G SP+ TYG+LI+G + + A I + ML C P+ VY
Sbjct: 367 NIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYT 426
Query: 343 ALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRF 402
++ LCR K A SL K + NA F+KG + E FR
Sbjct: 427 NMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNA----FIKGLCDAGRLDWAEKVFRQ 482
Query: 403 RD------FNLAPYSILLIGFCQAKKVDEA 426
+ N+ Y+ LL G +A +++EA
Sbjct: 483 MEQQHRCPPNIVTYNELLDGLAKANRIEEA 512
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 166/347 (47%), Gaps = 15/347 (4%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
++ +++ L+N C G++E A S L + + G + SSL+ G F +A L+
Sbjct: 280 NVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLW 339
Query: 69 GRMIKG-GILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCD 127
+MI+G G+ P+V+ Y +++G + G + +AV +F+ M + G P+ Y ++I GF
Sbjct: 340 NQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAK 399
Query: 128 IGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVT 187
G LD A + ++ + +T ++ +C+ +EA+ + M K C PS T
Sbjct: 400 RGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPT 459
Query: 188 FNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAG 247
FNA I GLC AG+LD A +F +ME Q + V+ + ++ + +A
Sbjct: 460 FNAFIKGLCDAGRLDWAEKVFRQME------------QQHRCPPNIVTYNELLDGLAKAN 507
Query: 248 QTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYG 307
+ AY L ++ GV TYN L++ C AG A +L + + G SPD +T
Sbjct: 508 RIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMN 567
Query: 308 TLIDGLYRVEREEDAFKIRDHML--KHVCEPSFAVYKALMTWLCRGK 352
+I + + E A ++ D + + P Y ++ LCR
Sbjct: 568 MIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSN 614
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 154/344 (44%), Gaps = 51/344 (14%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
Q ++ +N L+ GFC G + +AVS+ +E G + Y SLI+GF K + A
Sbjct: 348 LQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAV 407
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
++ +M+ G P+V++Y M+ L + EA + M + P +NA IKG
Sbjct: 408 YIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGL 467
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG-CFPS 184
CD G+LD A+++F QME+ C P+
Sbjct: 468 CDAGRLDW-----------------------------------AEKVFRQMEQQHRCPPN 492
Query: 185 AVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMC 244
VT+N L++GL KA +++EA+ G + +F R + S +++ + C
Sbjct: 493 IVTYNELLDGLAKANRIEEAY--------GLTREIFMRGVEWSSSTYNTL-----LHGSC 539
Query: 245 EAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQL--KGLSPD 302
AG A +L+ ++ G PD T N++I ++CK G A ++ + + PD
Sbjct: 540 NAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPD 599
Query: 303 SVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMT 346
++Y +I GL R ED + + M+ PS A + L+
Sbjct: 600 VISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 180/393 (45%), Gaps = 56/393 (14%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D+ + L+NG ++G+ +EA S+ L +G L Y++L+ + + ++ SL
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
++ K G+ PD IL+ ++ S G + +A+K+F +M + G P A +N +IKG+ I
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 129 GQLDH-ARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVT 187
G+L+ +R L + + + T IL+ C + + EA + +M+ G P VT
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 188 FNAL------------------------------------INGLCKAGKLDEAHLLFYKM 211
FN L +NG C+ GK++EA FY+M
Sbjct: 498 FNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRM 557
Query: 212 -EIGKSPSLFF--RLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDI 268
E+G P+LF L +G +++D + + V+ M E GV PD+
Sbjct: 558 KELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEF----------------GVKPDV 601
Query: 269 KTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDH 328
T++ L+N++ G+M +++ D+ G+ PD + L G R E A +I +
Sbjct: 602 VTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQ 661
Query: 329 MLKHVCEPSFAVYKALMTWLCRGKKISLAFSLY 361
M K P+ +Y +++ C ++ A +Y
Sbjct: 662 MRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVY 694
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 128/287 (44%), Gaps = 51/287 (17%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M + + ++ T ++NG+C++GK+EEA+ ++ G L ++SLI GF
Sbjct: 522 MLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNIND 581
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+ + M + G+ PDV+ ++ ++ S+ G + +++ +M++ G+ PD H ++
Sbjct: 582 MDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSI 641
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+ KG+ G+ + +A+++ NQM K G
Sbjct: 642 LAKGYARAGEPE-----------------------------------KAEQILNQMRKFG 666
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKM--EIGKSPSLFFRLAQGSDHVSDSVSLQK 238
P+ V + +I+G C AG++ +A ++ KM +G SP+L + +
Sbjct: 667 VRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNL--------------TTYET 712
Query: 239 KVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMN 285
+ EA Q A +LL + VVP KT ++ + + G N
Sbjct: 713 LIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIGVSN 759
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 147/315 (46%), Gaps = 19/315 (6%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
Q + T N+L+ +C Q K+EEA +++ ++ G + +++L + + A
Sbjct: 456 LQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAE 515
Query: 66 SLY-GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKG 124
+ RM+ + P+V ++ G EG++ EA++ F M + G+ P+ +N++IKG
Sbjct: 516 DMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKG 575
Query: 125 FCDIGQLDHARSLHVEISGHDGLH-DTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFP 183
F +I +D + V++ G+ D T + L+ G ++ +E++ M + G P
Sbjct: 576 FLNINDMDGVGEV-VDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDP 634
Query: 184 SAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEH 242
F+ L G +AG+ ++A + +M + G P++ V + +
Sbjct: 635 DIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNV--------------VIYTQIISG 680
Query: 243 MCEAGQTLNAYKLLTQLAD-SGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSP 301
C AG+ A ++ ++ G+ P++ TY LI F +A A +L KD++ K + P
Sbjct: 681 WCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVP 740
Query: 302 DSVTYGTLIDGLYRV 316
T + DG +
Sbjct: 741 TRKTMQLIADGWKSI 755
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 128/303 (42%), Gaps = 51/303 (16%)
Query: 142 SGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKL 201
SG D + T L+ + ++G +EA +FN + + G PS +T+ L+ L +
Sbjct: 311 SGGTTCGDVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTR---- 366
Query: 202 DEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLAD 261
H +SL KVE
Sbjct: 367 -------------------------QKHFHSLLSLISKVEK------------------- 382
Query: 262 SGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREED 321
+G+ PD +N +IN+ ++GN++ A K+F+ ++ G P + T+ TLI G ++ + E+
Sbjct: 383 NGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEE 442
Query: 322 AFKIRDHMLK-HVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALE 380
+ ++ D ML+ + +P+ L+ C +KI A+++ + D + N L
Sbjct: 443 SSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLA 502
Query: 381 EYFMK-GEVERAIRGLLELDFRFR-DFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNI 438
+ + + G A ++ + N+ ++ G+C+ K++EAL F + E +
Sbjct: 503 KAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGV 562
Query: 439 NIN 441
+ N
Sbjct: 563 HPN 565
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/278 (19%), Positives = 112/278 (40%), Gaps = 13/278 (4%)
Query: 197 KAGKLDEAHLLFYKMEIGKSPSLFFR--LAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYK 254
K L + +F E G+ F + G D S K + + E G+ A+
Sbjct: 281 KEANLADVEAVFKDSEEGRVQLRSFPCVICSGGTTCGDVRSRTKLMNGLIERGRPQEAHS 340
Query: 255 LLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLY 314
+ L + G P + TY L+ + + + + L ++ GL PD++ + +I+
Sbjct: 341 IFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASS 400
Query: 315 RVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDND 374
+ A KI + M + C+P+ + + L+ + K+ + L L+ + ND
Sbjct: 401 ESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPND 460
Query: 375 -SINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKK------VDEAL 427
+ N L + + +R I + ++ + + + P + +A E +
Sbjct: 461 RTCNILVQAWCN---QRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDM 517
Query: 428 IIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIF 465
II +L + N +C +++G C + + +A+ F
Sbjct: 518 IIPRMLHN-KVKPNVRTCGTIVNGYCEEGKMEEALRFF 554
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 196/438 (44%), Gaps = 34/438 (7%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
+ D T N +L+ C GKL +A L+ ++ R + S+L+ G + + ++A
Sbjct: 101 ENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMC 160
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
+ M+ G +PD I Y +++ L +G + A+ + +M G PD YN +I+
Sbjct: 161 ILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMF 220
Query: 127 DIGQLDHARSLHVEISGHDGLHDTC-----THTILICEMCKKGMVREAQEMFNQMEKLGC 181
D G + A D L + C T+T+L+ +C+ A E+ M GC
Sbjct: 221 DYGNAEQAIRFW-----KDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGC 275
Query: 182 FPSAVTFNALINGLCKAGKLDEA-----HLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSL 236
+P VT+N+L+N C+ G L+E H+L + +E+ ++V+
Sbjct: 276 YPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLEL------------------NTVTY 317
Query: 237 QKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQL 296
+ +C ++L + + P + TYNILIN CKA ++ A F +
Sbjct: 318 NTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLE 377
Query: 297 KGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISL 356
+ PD VTY T++ + + +DA ++ + C P Y +++ L + +
Sbjct: 378 QKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKK 437
Query: 357 AFSLYLEYLKSLPGRDNDSINALEEYFMKGE-VERAIRGLLELDFRFRDFNLAPYSILLI 415
A LY + L + D+ + +L F + VE A + L E R + Y +++
Sbjct: 438 ALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQ 497
Query: 416 GFCQAKKVDEALIIFSVL 433
G C+ K+++ A+ + ++
Sbjct: 498 GLCKKKEIEMAIEVVEIM 515
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 147/370 (39%), Gaps = 57/370 (15%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M M D T+N+++ CK+G + A+ LL + G + Y+++I F
Sbjct: 165 MVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGN 224
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+A + ++ G P +I Y +++ + A+++ +M G PD YN+
Sbjct: 225 AEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNS 284
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
++ C G L+ S+ I H +T T+ L+ +C E +E+ N M +
Sbjct: 285 LVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTS 344
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKS-PSLF-FRLAQGS----DHVSDSV 234
P+ +T+N LINGLCKA L A FY+M K P + + G+ V D++
Sbjct: 345 YCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAI 404
Query: 235 SLQKKVEHMC----------------EAGQTLNAYKLLTQLADSGVVPDI---------- 268
L +++ C + G A +L Q+ D+G+ PD
Sbjct: 405 ELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGF 464
Query: 269 -------------------------KTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDS 303
TY ++I CK + A ++ + + G PD
Sbjct: 465 CRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDE 524
Query: 304 VTYGTLIDGL 313
Y ++ G+
Sbjct: 525 TIYTAIVKGV 534
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 133/280 (47%), Gaps = 25/280 (8%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D+ T+N L+N C++G LEE S+++ + G + Y++L+ ++E +
Sbjct: 278 DIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEIL 337
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
M + P VI Y I++ GL + A+ F +M+++ LPD YN ++
Sbjct: 338 NIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKE 397
Query: 129 GQLDHARSLHVEISGHDGLHDTC------THTILICEMCKKGMVREAQEMFNQMEKLGCF 182
G +D A +E+ G L +TC T+ +I + KKG++++A E+++QM G F
Sbjct: 398 GMVDDA----IELLGL--LKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIF 451
Query: 183 PSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEH 242
P +T +LI G C+A ++EA ++ K S +GS + + ++
Sbjct: 452 PDDITRRSLIYGFCRANLVEEAG------QVLKETSNRGNGIRGSTY-------RLVIQG 498
Query: 243 MCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAG 282
+C+ + A +++ + G PD Y ++ + G
Sbjct: 499 LCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMG 538
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 121/288 (42%), Gaps = 18/288 (6%)
Query: 187 TFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEA 246
T N +++ LC GKL +A L M + V S V +
Sbjct: 106 TNNEILHNLCSNGKLTDACKLVEVM-------------ARHNQVPHFPSCSNLVRGLARI 152
Query: 247 GQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTY 306
Q A +L + SG VPD TYN++I + CK G++ A L +D+ L G PD +TY
Sbjct: 153 DQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITY 212
Query: 307 GTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLK 366
T+I ++ E A + L++ C P Y L+ +CR + A + +
Sbjct: 213 NTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAV 272
Query: 367 SLPGRDNDSINALEEY-FMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDE 425
D + N+L Y +G +E + + + N Y+ LL C + DE
Sbjct: 273 EGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDE 332
Query: 426 ALIIFSVLDEFNININPTSCVH--LISGLCAKRNLYDAVVIFLYSLDK 471
I +++ + + PT + LI+GLC R L A+ F L++
Sbjct: 333 VEEILNIM--YQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQ 378
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 95/204 (46%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M+ + + T+N+L+NG CK L A+ + + Y++++ K
Sbjct: 340 MYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGM 399
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
++A L G + P +I Y ++ GL+ +G + +A++++ +M+ G+ PD +
Sbjct: 400 VDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRS 459
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I GFC ++ A + E S T+ ++I +CKK + A E+ M G
Sbjct: 460 LIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGG 519
Query: 181 CFPSAVTFNALINGLCKAGKLDEA 204
C P + A++ G+ + G EA
Sbjct: 520 CKPDETIYTAIVKGVEEMGMGSEA 543
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D T L+ GFC+ +EEA +L+ G GIR S Y +I G K + A +
Sbjct: 453 DDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVV 512
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAV 100
M+ GG PD +Y +++G+ G EAV
Sbjct: 513 EIMLTGGCKPDETIYTAIVKGVEEMGMGSEAV 544
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/527 (22%), Positives = 224/527 (42%), Gaps = 61/527 (11%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R R F+ ++ + + G+L +A+ +L L++R G L ++ ID F +A R
Sbjct: 233 MKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANR 292
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+A RM GI+P+V+ Y M+RG + RV EA+++ +M +G LPD Y
Sbjct: 293 LEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYT 352
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGL------HDTCTHTI------------------- 155
I+ C ++ R L +++ GL ++T H +
Sbjct: 353 IMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEK 412
Query: 156 -----------LICEMCKKGMVREAQEMFNQMEKLG-CFPSAVTFNALINGLCKAGKLDE 203
++ +CK+G + EA+++ N+M G C P VT+ A++NG C+ G++D+
Sbjct: 413 GFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDK 472
Query: 204 AHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSG 263
A L M H ++VS + MC G++L A +++ +
Sbjct: 473 AKKLLQVMHT-------------HGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHW 519
Query: 264 VVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAF 323
P+ TY+++++ + G ++ A + +++ LKG P V L+ L R R +A
Sbjct: 520 WSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEAR 579
Query: 324 KIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLE-YLKSLPGRDNDSINALEEY 382
K + L C + + ++ C+ ++ A S+ + YL + ++
Sbjct: 580 KFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTL 639
Query: 383 FMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININP 442
KG + A + ++ + D Y ++ +CQ KVD+ + I + I+
Sbjct: 640 GKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKM------ISR 693
Query: 443 TSCV----HLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKELLE 485
C +I LC L +A + L K C L+E
Sbjct: 694 QKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALME 740
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/478 (23%), Positives = 218/478 (45%), Gaps = 20/478 (4%)
Query: 5 RFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEA 64
R++ D + +L K + + +L L++R G +S ++ + +A + +A
Sbjct: 202 RYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDA 261
Query: 65 HSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKG 124
+ M + G+ P++++ + R+ +A++ M G++P+ YN +I+G
Sbjct: 262 LKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRG 321
Query: 125 FCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEK-LGCFP 183
+CD+ +++ A L ++ L D ++ ++ +CK+ + E +++ +M K G P
Sbjct: 322 YCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVP 381
Query: 184 SAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHM 243
VT+N LI+ L K DEA F + AQ D + V +
Sbjct: 382 DQVTYNTLIHMLTKHDHADEA-------------LWFLKDAQEKGFRIDKLGYSAIVHAL 428
Query: 244 CEAGQTLNAYKLLTQLADSG-VVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPD 302
C+ G+ A L+ ++ G PD+ TY ++N FC+ G ++ A KL + + G P+
Sbjct: 429 CKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPN 488
Query: 303 SVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYL 362
+V+Y L++G+ R + +A ++ + +H P+ Y +M L R K+S A +
Sbjct: 489 TVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVR 548
Query: 363 EYLKS--LPGRDNDSINALEEYFMK-GEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQ 419
E + PG IN L + + G A + + E + N+ ++ ++ GFCQ
Sbjct: 549 EMVLKGFFPG--PVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQ 606
Query: 420 AKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGP 477
++D AL + + N + + + L+ L K + +A + L KG + P
Sbjct: 607 NDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTP 664
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 159/353 (45%), Gaps = 58/353 (16%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D+ T+ ++NGFC+ G++++A LL+++ G Y++L++G + + EA +
Sbjct: 453 DVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMM 512
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDA------------- 115
+ P+ I Y++++ GL EG++ EA + EM+ +G P
Sbjct: 513 NMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRD 572
Query: 116 -----------HCYN-----------AIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTH 153
C N +I GFC +LD A S+ ++ + D T+
Sbjct: 573 GRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTY 632
Query: 154 TILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM-- 211
T L+ + KKG + EA E+ +M G P+ VT+ +I+ C+ GK+D+ + KM
Sbjct: 633 TTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMIS 692
Query: 212 -------------------EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNA 252
++ ++ +L ++ + + SD+ + +E + G L+A
Sbjct: 693 RQKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASR-SDAKTCYALMEGYLKKGVPLSA 751
Query: 253 YKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKG-LSPDSV 304
YK+ ++ + ++PD+K L G ++ A KL L +G +SP S+
Sbjct: 752 YKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHISPQSL 804
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 170/416 (40%), Gaps = 59/416 (14%)
Query: 79 DVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLH 138
D ++Y ML LS + ++ M +RG+ ++ ++ + GQL A +
Sbjct: 206 DPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKV- 264
Query: 139 VEISGHDGLHDTCTHTILICEMCKKGMVR-----EAQEMFNQMEKLGCFPSAVTFNALIN 193
+ + G+ +LIC VR +A +M+ +G P+ VT+N +I
Sbjct: 265 LTLMQRAGVEPN----LLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIR 320
Query: 194 GLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAY 253
G C +++EA L M ++G + D VS + ++C+ + +
Sbjct: 321 GYCDLHRVEEAIELLEDMH-----------SKGC--LPDKVSYYTIMGYLCKEKRIVEVR 367
Query: 254 KLLTQLA-DSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDG 312
L+ ++A + G+VPD TYN LI+ K + + A KD Q KG D + Y ++
Sbjct: 368 DLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHA 427
Query: 313 LYRVEREEDAFKIRDHML-KHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGR 371
L + R +A + + ML K C P Y A++ CR
Sbjct: 428 LCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCR--------------------- 466
Query: 372 DNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFS 431
GEV++A + L + N Y+ LL G C+ K EA + +
Sbjct: 467 -------------LGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMN 513
Query: 432 VLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKELLECL 487
+ +E + N + ++ GL + L +A + + KGF GP LL+ L
Sbjct: 514 MSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSL 569
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/521 (22%), Positives = 215/521 (41%), Gaps = 76/521 (14%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D+ ++ ++ G K + +AV + + + + I SS++ + + ++EA+ L+
Sbjct: 325 DVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLF 384
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
+ I D + Y + L G+V EA+++F EM +G+ PD Y +I G C
Sbjct: 385 KEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQ 444
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
G+ A L +E+ G D + +L + G+ +EA E ME G P+ VT
Sbjct: 445 GKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTH 504
Query: 189 NALINGLCKAGKLDEAHLLFYKME---------------------------------IGK 215
N +I GL AG+LD+A + +E + K
Sbjct: 505 NMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPK 564
Query: 216 SP--SLFFRLAQGSDHVSDSVSLQKKVEHM----------------CEAGQTLNAYKLLT 257
S +LF L D++S + L ++ + C A +
Sbjct: 565 SVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFE 624
Query: 258 QLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLI--DGLYR 315
L +VPD+ TY I+IN++C+ A+ LF+D++ + + PD VTY L+ D
Sbjct: 625 ILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELD 684
Query: 316 VEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDS 375
++RE +AF + P Y ++ C + ++L+ K + R+
Sbjct: 685 MKREMEAFDVI---------PDVVYYTIMINRYCHLNDLKKVYALF----KDMKRREIVP 731
Query: 376 INALEEYFMKGEVERAIRGLLELDFRFRDFNLAP----YSILLIGFCQAKKVDEALIIFS 431
+K + ER L + F++ P Y++L+ C+ + EA IF
Sbjct: 732 DVVTYTVLLKNKPER------NLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFD 785
Query: 432 VLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKG 472
+ E ++ + LI+ C L +A +IF ++ G
Sbjct: 786 QMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESG 826
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 104/465 (22%), Positives = 168/465 (36%), Gaps = 107/465 (23%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D +NV + K GK+EEA+ L R + G + Y++LI G + ++A L
Sbjct: 395 DRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLM 454
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAII------ 122
M G PD+++Y ++ GL+ G EA + M RG+ P +N +I
Sbjct: 455 IEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDA 514
Query: 123 -------------------------KGFCDIGQLDHA--RSLHVEISGHDGLHDTCTHTI 155
KGFC G LDHA R + +E ++ T ++
Sbjct: 515 GELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSL 574
Query: 156 -------------------------------LICEMCKKGMVREAQEMFNQMEKLGCFPS 184
LI C+ VR+A+E F + P
Sbjct: 575 CAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPD 634
Query: 185 AVTFNALINGLCKAGKLDEAHLLF--------------YKMEIGKSPSL-FFRLAQGSDH 229
T+ +IN C+ + +A+ LF Y + + P L R + D
Sbjct: 635 LFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDV 694
Query: 230 VSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTY------------------ 271
+ D V + C Y L + +VPD+ TY
Sbjct: 695 IPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKA 754
Query: 272 ----------NILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREED 321
+LI+ CK G++ A ++F + G+ PD+ Y LI ++ ++
Sbjct: 755 FDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKE 814
Query: 322 AFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLK 366
A I D M++ +P Y AL+ CR + A L E L+
Sbjct: 815 AKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLE 859
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 130/306 (42%), Gaps = 29/306 (9%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
MW + + + + L+ +C+ + +A +L L Y+ +I+ + +
Sbjct: 591 MWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNE 650
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+A++L+ M + + PDV+ Y+++L + M EM ++PD Y
Sbjct: 651 PKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREMEAFDVIPDVVYYTI 703
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I +C + L +L ++ + + D T+T+L+ ++ + RE M+
Sbjct: 704 MINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSRE-------MKAFD 756
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKK 239
P + LI+ CK G L EA +F +M E G P D+
Sbjct: 757 VKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDP--------------DAAPYTAL 802
Query: 240 VEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGL 299
+ C+ G A + ++ +SGV PD+ Y LI C+ G + A KL K++ KG+
Sbjct: 803 IACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGI 862
Query: 300 SPDSVT 305
P +
Sbjct: 863 KPTKAS 868
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 158/386 (40%), Gaps = 65/386 (16%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLL-RLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSL 67
D T+ +++ + EE LL RLL + R Y + I+G + + A+ L
Sbjct: 216 DAHTYVLVVQALWRNDDKEELEKLLSRLLISETRN-PCVFYLNFIEGLCLNQMTDIAYFL 274
Query: 68 YGRMIKGGILPDV----ILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIK 123
+ IL D I Y ++RGL E R+ +A + +M + G+ PD + Y+AII+
Sbjct: 275 LQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIE 334
Query: 124 GFCDIGQLDHARSLHVE---------ISGHDGLHDTCTHTILICEMCKKGMVREAQEMFN 174
G H +++++ + ++ +IL C C+ G EA ++F
Sbjct: 335 G--------HRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQC-YCQMGNFSEAYDLFK 385
Query: 175 QMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSV 234
+ + V +N + L K GK++EA LF +M G D +
Sbjct: 386 EFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREM-------------TGKGIAPDVI 432
Query: 235 SLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDL 294
+ + C G+ +A+ L+ ++ +G PDI YN+L G AF+ K +
Sbjct: 433 NYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMM 492
Query: 295 QLKGLSPDSVTYGTLIDGLYRV----------------EREEDAFKIR--------DHML 330
+ +G+ P VT+ +I+GL RE DA ++ DH
Sbjct: 493 ENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAF 552
Query: 331 KHVCEPSF----AVYKALMTWLCRGK 352
+ F +VY L T LC K
Sbjct: 553 ERFIRLEFPLPKSVYFTLFTSLCAEK 578
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 108/480 (22%), Positives = 190/480 (39%), Gaps = 82/480 (17%)
Query: 24 GKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKG-GILPDVIL 82
G++E+++ LL IR+S ++L+ + ++EA ++ R G PD+
Sbjct: 136 GEMEQSLVLL---------IRVS--TALVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKA 184
Query: 83 YAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAI--------------------- 121
++ + GR V F E+ + GL DAH Y +
Sbjct: 185 LNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLL 244
Query: 122 --------------IKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTI----LICEMCKK 163
I+G C D A L + + L D I ++ +C +
Sbjct: 245 ISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYE 304
Query: 164 GMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRL 223
+ +A+ + MEK G P ++A+I G K M I K+ +F ++
Sbjct: 305 MRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRK------------NMNIPKAVDVFNKM 352
Query: 224 AQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGN 283
+ + + V + ++ C+ G AY L + ++ + D YN+ ++ K G
Sbjct: 353 LKKRKRI-NCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGK 411
Query: 284 MNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKA 343
+ A +LF+++ KG++PD + Y TLI G + DAF + M P +Y
Sbjct: 412 VEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNV 471
Query: 344 LMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSIN-----ALEEYFMKGEVERAIRGLLEL 398
L L AF E LK + R +E GE+++A L
Sbjct: 472 LAGGLATNGLAQEAF----ETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESL 527
Query: 399 DFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSC-VHLISGLCAKRN 457
+ + R+ + + ++ GFC A +D A F L EF + P S L + LCA+++
Sbjct: 528 EHKSRENDAS----MVKGFCAAGCLDHAFERFIRL-EFPL---PKSVYFTLFTSLCAEKD 579
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D+ + VL++ CK G L EA + + G + Y++LI K EA ++
Sbjct: 760 DVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIF 819
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAI 121
RMI+ G+ PDV+ Y ++ G G V +AVK+ EM+++G+ P +A+
Sbjct: 820 DRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAV 872
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 169/356 (47%), Gaps = 53/356 (14%)
Query: 5 RFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEA 64
R + D+ T+N ++ G+CK G+ ++A+ LR +E G Y ++I + +
Sbjct: 252 RIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSC 311
Query: 65 HSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKG 124
+LY M + GI +++++ GL EG++ E +F MI++G P+ Y +I G
Sbjct: 312 VALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDG 371
Query: 125 FCDIGQLDHA-RSLHVEISGHDGLH-DTCTHTILICEMCKKGMVREAQEMFNQMEKLGCF 182
+ G ++ A R LH I +G D T+++++ +CK G V EA + F+ G
Sbjct: 372 YAKSGSVEDAIRLLHRMID--EGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLA 429
Query: 183 PSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEH 242
+++ +++LI+GL KAG++DEA LF E
Sbjct: 430 INSMFYSSLIDGLGKAGRVDEAERLF--------------------------------EE 457
Query: 243 MCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDL-QLKGLSP 301
M E G T ++Y YN LI++F K ++ A LFK + + +G
Sbjct: 458 MSEKGCTRDSY----------------CYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQ 501
Query: 302 DSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLA 357
TY L+ G+++ R E+A K+ D M+ P+ A ++AL T LC K++ A
Sbjct: 502 TVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARA 557
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 158/318 (49%), Gaps = 21/318 (6%)
Query: 12 TFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRM 71
F++++ G CK+GKL E ++ + R G ++ Y+ LIDG+ K+ +A L RM
Sbjct: 329 AFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRM 388
Query: 72 IKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQL 131
I G PDV+ Y++++ GL GRV EA+ F GL ++ Y+++I G G++
Sbjct: 389 IDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRV 448
Query: 132 DHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQM-EKLGCFPSAVTFNA 190
D A L E+S D+ + LI K V EA +F +M E+ GC + T+
Sbjct: 449 DEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTI 508
Query: 191 LINGLCKAGKLDEAHLLFYKM-EIGKSPSL--FFRLAQGSDHVSDSVSLQKKVEHMCEAG 247
L++G+ K + +EA L+ M + G +P+ F L+ G +C +G
Sbjct: 509 LLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTG----------------LCLSG 552
Query: 248 QTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYG 307
+ A K+L +LA GV+ D + +IN+ CKAG + A KL + +G
Sbjct: 553 KVARACKILDELAPMGVILDAACED-MINTLCKAGRIKEACKLADGITERGREVPGRIRT 611
Query: 308 TLIDGLYRVEREEDAFKI 325
+I+ L +V + + A K+
Sbjct: 612 VMINALRKVGKADLAMKL 629
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 108/443 (24%), Positives = 197/443 (44%), Gaps = 24/443 (5%)
Query: 43 IRLSGYSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKM 102
+ +S ++LI F K E ++ +M + GI P + Y ++ GL + V A ++
Sbjct: 185 MTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERV 244
Query: 103 FAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHA--RSLHVEISGHDGLHDTCTHTILICEM 160
F M + PD YN +IKG+C GQ A + +E GH+ D T+ +I
Sbjct: 245 FEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEA--DKITYMTMIQAC 302
Query: 161 CKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSL 219
++ +M++ G F+ +I GLCK GKL+E + +F M G P++
Sbjct: 303 YADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNV 362
Query: 220 FFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFC 279
++ ++G +A +LL ++ D G PD+ TY++++N C
Sbjct: 363 AIYTVL--------------IDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLC 408
Query: 280 KAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFA 339
K G + A F + GL+ +S+ Y +LIDGL + R ++A ++ + M + C
Sbjct: 409 KNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSY 468
Query: 340 VYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSIN---ALEEYFMKGEVERAIRGLL 396
Y AL+ + +K+ A +L+ + ++ G D L F + E A++
Sbjct: 469 CYNALIDAFTKHRKVDEAIALF-KRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWD 527
Query: 397 ELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKR 456
+ + A + L G C + KV A I L + ++ +C +I+ LC
Sbjct: 528 MMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILD-AACEDMINTLCKAG 586
Query: 457 NLYDAVVIFLYSLDKGFELGPKI 479
+ +A + ++G E+ +I
Sbjct: 587 RIKEACKLADGITERGREVPGRI 609
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 112/246 (45%), Gaps = 38/246 (15%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
F+ D+ T++V++NG CK G++EEA+ DG I YSSLIDG KA R +EA
Sbjct: 393 FKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAE 452
Query: 66 SLYGRMIKGGILPD------------------------------------VILYAIMLRG 89
L+ M + G D V Y I+L G
Sbjct: 453 RLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSG 512
Query: 90 LSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHD 149
+ E R EA+K++ MI +G+ P A C+ A+ G C G++ A + E++ + D
Sbjct: 513 MFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILD 572
Query: 150 TCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEA-HLLF 208
+I +CK G ++EA ++ + + + G +IN L K GK D A L+
Sbjct: 573 AACED-MINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKLMH 631
Query: 209 YKMEIG 214
K+ IG
Sbjct: 632 SKIGIG 637
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 166/407 (40%), Gaps = 60/407 (14%)
Query: 108 QRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVR 167
Q+ + CY +++ +D R + EI + LI K GMV
Sbjct: 145 QKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVE 204
Query: 168 EAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGS 227
E ++ +M++ G P+ T+N L+NGL A +D A +F ME G+
Sbjct: 205 ELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIK---------- 254
Query: 228 DHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTY---------------- 271
D V+ ++ C+AGQT A + L + G D TY
Sbjct: 255 ---PDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSC 311
Query: 272 -------------------NILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDG 312
+++I CK G +N + +F+++ KG P+ Y LIDG
Sbjct: 312 VALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDG 371
Query: 313 LYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRD 372
+ EDA ++ M+ +P Y ++ LC+ ++ A L+Y + D
Sbjct: 372 YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEA----LDYFHTC-RFD 426
Query: 373 NDSINAL------EEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEA 426
+IN++ + G V+ A R E+ + + Y+ L+ F + +KVDEA
Sbjct: 427 GLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEA 486
Query: 427 LIIFSVLDEFN-ININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKG 472
+ +F ++E + + L+SG+ + +A+ ++ +DKG
Sbjct: 487 IALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKG 533
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 159/334 (47%), Gaps = 23/334 (6%)
Query: 5 RFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEA 64
R + + T+ L +G+ K G L+EA ++ +ER G + Y++LI G FK R N+
Sbjct: 536 RCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKV 595
Query: 65 HSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKG 124
L + G+ P V Y ++ G N G + +A EMI++G+ + + + I
Sbjct: 596 ADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANS 655
Query: 125 FCDIGQLDHARSLHVEI-------SGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQME 177
+ ++D A L +I G+ L + + C +K A+ + N
Sbjct: 656 LFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQK----IAESVENSTP 711
Query: 178 KLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQ 237
K P+ + +N I GLCKAGKL++A LF L + D +
Sbjct: 712 KKLLVPNNIVYNVAIAGLCKAGKLEDAR------------KLFSDLLSSDRFIPDEYTYT 759
Query: 238 KKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLK 297
+ AG A+ L ++A G++P+I TYN LI CK GN++ A +L L K
Sbjct: 760 ILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQK 819
Query: 298 GLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLK 331
G++P+++TY TLIDGL + +A ++++ M++
Sbjct: 820 GITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIE 853
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/452 (24%), Positives = 211/452 (46%), Gaps = 27/452 (5%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERD-GRGIRLSGYSSLIDGFFKARRYNEAHSL 67
D+ T ++++N +C+ G +++A+ + E G + + Y+SLI+G+ +
Sbjct: 224 DVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRV 283
Query: 68 YGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCD 127
M + G+ +V+ Y +++G +G + EA +F + ++ L+ D H Y ++ G+C
Sbjct: 284 LRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCR 343
Query: 128 IGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVT 187
GQ+ A +H + +T LI CK G + EA+++F++M P T
Sbjct: 344 TGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHT 403
Query: 188 FNALINGLCKAGKLDEAHLLFYKM---EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMC 244
+N L++G C+AG +DEA L +M E+ + + L +G +
Sbjct: 404 YNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRI-------------- 449
Query: 245 EAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSV 304
G + L + GV D + + L+ + K G+ N A KL++++ +GL D++
Sbjct: 450 --GAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTI 507
Query: 305 TYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSL--YL 362
T +I GL ++E+ +A +I D++ C+P+ Y+AL + + AF++ Y+
Sbjct: 508 TLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYM 567
Query: 363 EYLKSLPGRD--NDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQA 420
E P + N I+ +Y +V + +EL R +A Y L+ G+C
Sbjct: 568 ERKGIFPTIEMYNTLISGAFKYRHLNKVADLV---IELRARGLTPTVATYGALITGWCNI 624
Query: 421 KKVDEALIIFSVLDEFNININPTSCVHLISGL 452
+D+A + E I +N C + + L
Sbjct: 625 GMIDKAYATCFEMIEKGITLNVNICSKIANSL 656
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 170/366 (46%), Gaps = 13/366 (3%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R R++ T+ L+ G+CK+G +EEA + LL+ Y L+DG+ + +
Sbjct: 287 MSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQ 346
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+A ++ MI+ G+ + + ++ G G++ EA ++F+ M L PD H YN
Sbjct: 347 IRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNT 406
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
++ G+C G +D A L ++ + + T+ IL+ + G + ++ M K G
Sbjct: 407 LVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRG 466
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKV 240
++ + L+ L K G +EA L+ + LA+G ++D+++L +
Sbjct: 467 VNADEISCSTLLEALFKLGDFNEAMKLWENV-----------LARG--LLTDTITLNVMI 513
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLS 300
+C+ + A ++L + P ++TY L + + K GN+ AF + + ++ KG+
Sbjct: 514 SGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIF 573
Query: 301 PDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSL 360
P Y TLI G ++ + + P+ A Y AL+T C I A++
Sbjct: 574 PTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYAT 633
Query: 361 YLEYLK 366
E ++
Sbjct: 634 CFEMIE 639
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 105/452 (23%), Positives = 194/452 (42%), Gaps = 64/452 (14%)
Query: 12 TFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRM 71
T+N+LL G+ + G + +SL +++ + G S+L++ FK +NEA L+ +
Sbjct: 438 TYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENV 497
Query: 72 IKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAE-------------------------- 105
+ G+L D I +M+ GL +V EA ++
Sbjct: 498 LARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNL 557
Query: 106 ---------MIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTIL 156
M ++G+ P YN +I G L+ L +E+ T+ L
Sbjct: 558 KEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGAL 617
Query: 157 ICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYK------ 210
I C GM+ +A +M + G + + + N L + K+DEA LL K
Sbjct: 618 ITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDL 677
Query: 211 -----------MEIGKSPSL-FFRLAQGSDH-------VSDSVSLQKKVEHMCEAGQTLN 251
+E + L ++A+ ++ V +++ + +C+AG+ +
Sbjct: 678 LLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLED 737
Query: 252 AYKLLTQLADSG-VVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLI 310
A KL + L S +PD TY ILI+ AG++N AF L ++ LKG+ P+ VTY LI
Sbjct: 738 ARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALI 797
Query: 311 DGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPG 370
GL ++ + A ++ + + P+ Y L+ L + ++ A L + ++
Sbjct: 798 KGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLV 857
Query: 371 RDND---SINALEEYFMKGEVERAIRGLLELD 399
R +D ++ +E + EV+ G++E++
Sbjct: 858 RGSDKQGDVDIPKEVVLDPEVKLGSTGVIEMN 889
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 181/424 (42%), Gaps = 29/424 (6%)
Query: 95 RVGE---AVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLH-DT 150
R GE A+ ++ +MI + PD + ++ +C G +D A E GL +
Sbjct: 202 RKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNV 261
Query: 151 CTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYK 210
T+ LI G V + M + G + VT+ +LI G CK G ++EA +F
Sbjct: 262 VTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVF-- 319
Query: 211 MEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKT 270
E+ K L V+D ++ C GQ +A ++ + + GV +
Sbjct: 320 -ELLKEKKL----------VADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTI 368
Query: 271 YNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHML 330
N LIN +CK+G + A ++F + L PD TY TL+DG R ++A K+ D M
Sbjct: 369 CNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMC 428
Query: 331 KHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINA---LEEYFMKGE 387
+ P+ Y L+ R SL+ LK G + D I+ LE F G+
Sbjct: 429 QKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKR--GVNADEISCSTLLEALFKLGD 486
Query: 388 VERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVH 447
A++ + R + ++++ G C+ +KV+EA I ++ F +
Sbjct: 487 FNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQA 546
Query: 448 LISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKELLECLLVSQDKRKY---AIDLIGRM 504
L G NL +A + Y KG + P I E+ L+ K ++ DL+ +
Sbjct: 547 LSHGYYKVGNLKEAFAVKEYMERKG--IFPTI--EMYNTLISGAFKYRHLNKVADLVIEL 602
Query: 505 KSRG 508
++RG
Sbjct: 603 RARG 606
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/430 (20%), Positives = 183/430 (42%), Gaps = 36/430 (8%)
Query: 47 GYSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRV--GEAVKMFA 104
Y ++ +AR Y + S Y L L++ G V GE V++F
Sbjct: 106 AYCKMVHILSRARNYQQTKS----------------YLCELVALNHSGFVVWGELVRVFK 149
Query: 105 EMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKG 164
E P ++ I+K + + G + +A + + + + + L+ + +KG
Sbjct: 150 EF---SFSPTV--FDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKG 204
Query: 165 MVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLA 224
A +++QM P T + ++N C++G +D+A + + E SL L
Sbjct: 205 ENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETE----SSLGLEL- 259
Query: 225 QGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNM 284
+ V+ + G ++L +++ GV ++ TY LI +CK G M
Sbjct: 260 -------NVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLM 312
Query: 285 NGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKAL 344
A +F+ L+ K L D YG L+DG R + DA ++ D+M++ + + +L
Sbjct: 313 EEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSL 372
Query: 345 MTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINAL-EEYFMKGEVERAIRGLLELDFRFR 403
+ C+ ++ A ++ D+ + N L + Y G V+ A++ ++ +
Sbjct: 373 INGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEV 432
Query: 404 DFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVV 463
+ Y+ILL G+ + + L ++ ++ + +N + SC L+ L + +A+
Sbjct: 433 VPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMK 492
Query: 464 IFLYSLDKGF 473
++ L +G
Sbjct: 493 LWENVLARGL 502
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 175/365 (47%), Gaps = 24/365 (6%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R +RD T+ +++ + GK +EAV L + +G + + GY++L+ K +
Sbjct: 261 MKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKM 320
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEG---RVGEAVKMFAEMIQRGLLPDAHC 117
++A ++ RM++ G P+ Y+++L L EG R+ V++ + +G+
Sbjct: 321 VDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGI------ 374
Query: 118 YNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQME 177
Y+ +++ +G + A L ++ + ++ ++ +C G EA EM +++
Sbjct: 375 YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIH 434
Query: 178 KLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEI-GKSPSLFFRLAQGSDHVSDSVSL 236
+ G + +N + + L K ++ H LF KM+ G SP +F +
Sbjct: 435 EKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIF--------------TY 480
Query: 237 QKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQL 296
+ G+ A + +L S PDI +YN LIN K G+++ A FK++Q
Sbjct: 481 NILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQE 540
Query: 297 KGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISL 356
KGL+PD VTY TL++ + ER E A+ + + ML C+P+ Y L+ L + + +
Sbjct: 541 KGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAE 600
Query: 357 AFSLY 361
A LY
Sbjct: 601 AVDLY 605
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/450 (25%), Positives = 208/450 (46%), Gaps = 32/450 (7%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
+++T N+L+ F G E+ LRL+++ + Y L+ + ++R Y++A +Y
Sbjct: 170 NISTVNILIGFF---GNTEDLQMCLRLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVY 226
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
+ +GG D+ Y ++L L+ + + A ++F +M +R D + Y +I+ I
Sbjct: 227 CEIRRGGHKLDIFAYNMLLDALAKDEK---ACQVFEDMKKRHCRRDEYTYTIMIRTMGRI 283
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
G+ D A L E+ + + L+ + K MV +A ++F++M + GC P+ T+
Sbjct: 284 GKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTY 343
Query: 189 NALINGLCKAGKLDEAHLLFYKMEIGKSP------SLFFRLAQGSDHVSDSVSL------ 236
+ L+N L G+L L +EI K S R HVS++ L
Sbjct: 344 SLLLNLLVAEGQLVR---LDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWS 400
Query: 237 ----------QKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNG 286
+E +C AG+T+ A ++L+++ + GVV D YN + ++ K ++
Sbjct: 401 FPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISH 460
Query: 287 AFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMT 346
LF+ ++ G SPD TY LI RV ++A I + + + C+P Y +L+
Sbjct: 461 IHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLIN 520
Query: 347 WLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGE-VERAIRGLLELDFRFRDF 405
L + + A + E + D + + L E F K E VE A E+ +
Sbjct: 521 CLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQP 580
Query: 406 NLAPYSILLIGFCQAKKVDEALIIFSVLDE 435
N+ Y+ILL + + EA+ ++S + +
Sbjct: 581 NIVTYNILLDCLEKNGRTAEAVDLYSKMKQ 610
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 98/212 (46%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
MW + + ++ +L C GK EA+ +L + G Y+++ K ++
Sbjct: 398 MWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQ 457
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+ H L+ +M K G PD+ Y I++ G V EA+ +F E+ + PD YN+
Sbjct: 458 ISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNS 517
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I G +D A E+ D T++ L+ K V A +F +M G
Sbjct: 518 LINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKG 577
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKME 212
C P+ VT+N L++ L K G+ EA L+ KM+
Sbjct: 578 CQPNIVTYNILLDCLEKNGRTAEAVDLYSKMK 609
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 77/148 (52%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D+ T+N+L+ F + G+++EA+++ LER + Y+SLI+ K +EAH +
Sbjct: 476 DIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRF 535
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
M + G+ PDV+ Y+ ++ RV A +F EM+ +G P+ YN ++
Sbjct: 536 KEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKN 595
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTIL 156
G+ A L+ ++ D+ T+T+L
Sbjct: 596 GRTAEAVDLYSKMKQQGLTPDSITYTVL 623
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 115/486 (23%), Positives = 209/486 (43%), Gaps = 95/486 (19%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
F + T+ L+N + K GK+ +A+ + R+++ +G L YS +I+GF K + + A
Sbjct: 480 FTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAF 539
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
+++ M+K G+ PDVILY N II F
Sbjct: 540 AVFEDMVKEGMKPDVILY-----------------------------------NNIISAF 564
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
C +G +D A E+ T T +I K G +R + E+F+ M + GC P+
Sbjct: 565 CGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTV 624
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCE 245
TFN LINGL + ++++A + +M + ++H + K ++
Sbjct: 625 HTFNGLINGLVEKRQMEKAVEILDEMTLAG--------VSANEH-----TYTKIMQGYAS 671
Query: 246 AGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVT 305
G T A++ T+L + G+ DI TY L+ + CK+G M A + K++ + + +S
Sbjct: 672 VGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFV 731
Query: 306 YGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYL 365
Y LIDG R +A + M K +P Y + ++ +
Sbjct: 732 YNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKA-------------- 777
Query: 366 KSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDE 425
G++ RA + + E++ N+ Y+ L+ G+ +A ++
Sbjct: 778 --------------------GDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEK 817
Query: 426 ALIIFSVLDEFNININPTSCVH--LISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKEL 483
AL + + + I P V+ L++ L ++ ++ +A ++YS G ICKE+
Sbjct: 818 ALSCYEEMKA--MGIKPDKAVYHCLLTSLLSRASIAEA---YIYS---GVMT---ICKEM 866
Query: 484 LECLLV 489
+E L+
Sbjct: 867 VEAGLI 872
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/458 (22%), Positives = 196/458 (42%), Gaps = 28/458 (6%)
Query: 13 FNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSG--YSSLIDGFFKARRYNEAHSLYGR 70
F +++ + ++G + A + RGI + Y+SLI + R +EA S +
Sbjct: 312 FGLMVKFYGRRGDMHRARETFERMR--ARGITPTSRIYTSLIHAYAVGRDMDEALSCVRK 369
Query: 71 MIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQ 130
M + GI ++ Y++++ G S G A F E + +A Y II C
Sbjct: 370 MKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCN 429
Query: 131 LDHARSL--HVEISGHD---GLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
++ A +L +E G D ++ T + KKG+V +F ++++ G P+
Sbjct: 430 MERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLV-----VFKRLKECGFTPTV 484
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCE 245
VT+ LIN K GK+ +A +E+ + +G H + S+ + +
Sbjct: 485 VTYGCLINLYTKVGKISKA------LEVSR-----VMKEEGVKHNLKTYSMM--INGFVK 531
Query: 246 AGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVT 305
NA+ + + G+ PD+ YN +I++FC GNM+ A + K++Q P + T
Sbjct: 532 LKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRT 591
Query: 306 YGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLE-Y 364
+ +I G + + ++ D M + C P+ + L+ L +++ A + E
Sbjct: 592 FMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMT 651
Query: 365 LKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVD 424
L + ++ ++ Y G+ +A L D ++ Y LL C++ ++
Sbjct: 652 LAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQ 711
Query: 425 EALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAV 462
AL + + NI N LI G + ++++A
Sbjct: 712 SALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAA 749
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 130/310 (41%), Gaps = 50/310 (16%)
Query: 5 RFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEA 64
R + TF +++G+ K G + ++ + ++ R G + ++ LI+G + R+ +A
Sbjct: 584 RHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKA 643
Query: 65 HSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKG 124
+ M G+ + Y +++G ++ G G+A + F + GL D Y A++K
Sbjct: 644 VEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKA 703
Query: 125 FCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPS 184
C G++ A ++ E+S + ++ + ILI ++G V EA ++ QM+K G P
Sbjct: 704 CCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPD 763
Query: 185 AVTFNALINGLCKAGKLDEAHLLFYKME-IGKSPSLFFRLAQGSDHVSDSVSLQKKVEHM 243
T+ + I+ KAG ++ A +ME +G P
Sbjct: 764 IHTYTSFISACSKAGDMNRATQTIEEMEALGVKP-------------------------- 797
Query: 244 CEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDS 303
+IKTY LI + +A A +++++ G+ PD
Sbjct: 798 -----------------------NIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDK 834
Query: 304 VTYGTLIDGL 313
Y L+ L
Sbjct: 835 AVYHCLLTSL 844
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 61/122 (50%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R R+ +N+L++G+ ++G + EA L++ ++++G + Y+S I KA
Sbjct: 720 MSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGD 779
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
N A M G+ P++ Y +++G + +A+ + EM G+ PD Y+
Sbjct: 780 MNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHC 839
Query: 121 II 122
++
Sbjct: 840 LL 841
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 145/317 (45%), Gaps = 49/317 (15%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
+L T+ +L G+ +G +E A +L + G + Y+ L+DG+ K R++EA ++
Sbjct: 225 NLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVM 284
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
M K I P+ + Y +M+R L E + GEA MF EM++R +PD+ +I C+
Sbjct: 285 DDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCE- 343
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
DH V EA ++ +M K C P
Sbjct: 344 ---DHK-------------------------------VDEACGLWRKMLKNNCMPDNALL 369
Query: 189 NALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQ 248
+ LI+ LCK G++ EA LF + E G PSL ++ + MCE G+
Sbjct: 370 STLIHWLCKEGRVTEARKLFDEFEKGSIPSL--------------LTYNTLIAGMCEKGE 415
Query: 249 TLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGT 308
A +L + + P+ TYN+LI K GN+ ++ +++ G P+ T+
Sbjct: 416 LTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLI 475
Query: 309 LIDGLYRVEREEDAFKI 325
L +GL ++ +EEDA KI
Sbjct: 476 LFEGLQKLGKEEDAMKI 492
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 183/399 (45%), Gaps = 44/399 (11%)
Query: 16 LLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKG- 74
LL + G+ E ++ + + G + ++L++ + +R++ H+++ +
Sbjct: 126 LLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESF 185
Query: 75 GILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHA 134
GI P++ ++++ L + + A K+ E+ GL+P+ Y I+ G+ G ++ A
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 135 RSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALING 194
+ + E+ D T+T+L+ CK G EA + + MEK P+ VT+ +I
Sbjct: 246 KRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRA 305
Query: 195 LCKAGKLDEAHLLFYKM-----------------------EIGKSPSLFFRLAQGSDHVS 231
LCK K EA +F +M ++ ++ L+ ++ + ++ +
Sbjct: 306 LCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLK-NNCMP 364
Query: 232 DSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLF 291
D+ L + +C+ G+ A KL + + G +P + TYN LI C+ G + A +L+
Sbjct: 365 DNALLSTLIHWLCKEGRVTEARKLFDEF-EKGSIPSLLTYNTLIAGMCEKGELTEAGRLW 423
Query: 292 KDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRG 351
D+ + P++ TY LI+GL + ++ ++ + ML+ C P+
Sbjct: 424 DDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPN-------------- 469
Query: 352 KKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEVER 390
F + E L+ L G++ D++ + M G+V++
Sbjct: 470 ---KTTFLILFEGLQKL-GKEEDAMKIVSMAVMNGKVDK 504
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 142/306 (46%), Gaps = 28/306 (9%)
Query: 164 GMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLF--YKMEIGKSPSLFF 221
G + +F ++ G S + N L+N L + + D H +F K G +P++F
Sbjct: 134 GRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIF- 192
Query: 222 RLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKA 281
+ V+ +C+ +AYK+L ++ G+VP++ TY ++ +
Sbjct: 193 -------------TCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVAR 239
Query: 282 GNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVY 341
G+M A ++ +++ +G PD+ TY L+DG ++ R +A + D M K+ EP+ Y
Sbjct: 240 GDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTY 299
Query: 342 KALMTWLCRGKKISLAFSLYLEYLKSLPGRDND----SINALEEYFMKGEVERAIRGLLE 397
++ LC+ KK A +++ E L+ D+ I+AL E E R +L+
Sbjct: 300 GVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLK 359
Query: 398 LDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVH--LISGLCAK 455
+ + A S L+ C+ +V EA +F DEF P+ + LI+G+C K
Sbjct: 360 NNCMPDN---ALLSTLIHWLCKEGRVTEARKLF---DEFEKGSIPSLLTYNTLIAGMCEK 413
Query: 456 RNLYDA 461
L +A
Sbjct: 414 GELTEA 419
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 157/311 (50%), Gaps = 16/311 (5%)
Query: 12 TFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRM 71
TF ++ + GK ++AV L + G L+ +++++D K++R +A+ L+ R
Sbjct: 128 TFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELF-RA 186
Query: 72 IKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQL 131
++G D + Y ++L G R +A+++ EM++RG+ P+ YN ++KGF GQ+
Sbjct: 187 LRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQI 246
Query: 132 DHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNAL 191
HA +E+ D D T+T ++ G ++ A+ +F++M + G PS T+NA+
Sbjct: 247 RHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAM 306
Query: 192 INGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTL 250
I LCK ++ A ++F +M G P++ + + + AG+
Sbjct: 307 IQVLCKKDNVENAVVMFEEMVRRGYEPNV--------------TTYNVLIRGLFHAGEFS 352
Query: 251 NAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLI 310
+L+ ++ + G P+ +TYN++I + + + A LF+ + P+ TY LI
Sbjct: 353 RGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILI 412
Query: 311 DGLYRVEREED 321
G++ +R ED
Sbjct: 413 SGMFVRKRSED 423
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 131/296 (44%), Gaps = 14/296 (4%)
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
SL RM I P +AI+ ++ G+ +AVK+F M + G D +N I+
Sbjct: 112 SLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVL 171
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
C +++ A L + G + DT T+ +++ C +A E+ +M + G P+
Sbjct: 172 CKSKRVEKAYELFRALRGRFSV-DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNL 230
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCE 245
T+N ++ G +AG++ A F +M + D D V+ V
Sbjct: 231 TTYNTMLKGFFRAGQIRHAWEFFLEM-------------KKRDCEIDVVTYTTVVHGFGV 277
Query: 246 AGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVT 305
AG+ A + ++ GV+P + TYN +I CK N+ A +F+++ +G P+ T
Sbjct: 278 AGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTT 337
Query: 306 YGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLY 361
Y LI GL+ ++ M CEP+F Y ++ + ++ A L+
Sbjct: 338 YNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLF 393
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 128/260 (49%), Gaps = 6/260 (2%)
Query: 5 RFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEA 64
RF D T+NV+LNG+C + +A+ +L+ + G L+ Y++++ GFF+A + A
Sbjct: 190 RFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHA 249
Query: 65 HSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKG 124
+ M K DV+ Y ++ G G + A +F EMI+ G+LP YNA+I+
Sbjct: 250 WEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQV 309
Query: 125 FCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPS 184
C +++A + E+ + T+ +LI + G +E+ +ME GC P+
Sbjct: 310 LCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPN 369
Query: 185 AVTFNALINGLCKAGKLDEAHLLFYKMEIGKS-PSLFFRLAQGSDHVSDSVSLQKKVEHM 243
T+N +I + ++++A LF KM G P+L + + + ++K+ E M
Sbjct: 370 FQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNL-----DTYNILISGMFVRKRSEDM 424
Query: 244 CEAGQTLNAYKLLTQLADSG 263
AG A ++L + SG
Sbjct: 425 VVAGNQAFAKEILRLQSKSG 444
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 148/313 (47%), Gaps = 15/313 (4%)
Query: 152 THTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM 211
T I+ G +A ++F M + GCF +FN +++ LCK+ ++++A+ LF
Sbjct: 128 TFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELF--- 184
Query: 212 EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTY 271
R +G V D+V+ + C +T A ++L ++ + G+ P++ TY
Sbjct: 185 ----------RALRGRFSV-DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTY 233
Query: 272 NILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLK 331
N ++ F +AG + A++ F +++ + D VTY T++ G + A + D M++
Sbjct: 234 NTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIR 293
Query: 332 HVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINAL-EEYFMKGEVER 390
PS A Y A++ LC+ + A ++ E ++ + + N L F GE R
Sbjct: 294 EGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSR 353
Query: 391 AIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLIS 450
+ ++ + N Y++++ + + +V++AL +F + + N + LIS
Sbjct: 354 GEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILIS 413
Query: 451 GLCAKRNLYDAVV 463
G+ ++ D VV
Sbjct: 414 GMFVRKRSEDMVV 426
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 94/192 (48%)
Query: 4 RRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNE 63
R +L T+N +L GF + G++ A +++ I + Y++++ GF A
Sbjct: 224 RGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKR 283
Query: 64 AHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIK 123
A +++ MI+ G+LP V Y M++ L + V AV MF EM++RG P+ YN +I+
Sbjct: 284 ARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIR 343
Query: 124 GFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFP 183
G G+ L + + T+ ++I + V +A +F +M C P
Sbjct: 344 GLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLP 403
Query: 184 SAVTFNALINGL 195
+ T+N LI+G+
Sbjct: 404 NLDTYNILISGM 415
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 137/312 (43%), Gaps = 4/312 (1%)
Query: 228 DHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGA 287
++V D+ S ++ + L+ ++ + P KT+ I+ + AG + A
Sbjct: 86 EYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKA 145
Query: 288 FKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTW 347
KLF ++ G D ++ T++D L + +R E A+++ L+ Y ++
Sbjct: 146 VKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELF-RALRGRFSVDTVTYNVILNG 204
Query: 348 LCRGKKISLAFSLYLEYLKSLPGRDNDSINA-LEEYFMKGEVERAIRGLLELDFRFRDFN 406
C K+ A + E ++ + + N L+ +F G++ A LE+ R + +
Sbjct: 205 WCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEID 264
Query: 407 LAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFL 466
+ Y+ ++ GF A ++ A +F + + + + +I LC K N+ +AVV+F
Sbjct: 265 VVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFE 324
Query: 467 YSLDKGFELGPKICKELLECLLVSQDKRKYAIDLIGRMKSRGYRLHKYQYRQTISLLQQL 526
+ +G+E L+ L + + + +L+ RM++ G + Y I +
Sbjct: 325 EMVRRGYEPNVTTYNVLIRGLFHAGEFSR-GEELMQRMENEGCEPNFQTYNMMIRYYSEC 383
Query: 527 QE-GKAVKLFSE 537
E KA+ LF +
Sbjct: 384 SEVEKALGLFEK 395
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 160/356 (44%), Gaps = 16/356 (4%)
Query: 10 LATFNVLLNGFCKQG-KLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
L T+NV+LN F K G + SL+ ++ DG Y++LI + + EA ++
Sbjct: 243 LITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVF 302
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
M G D + Y +L R EA+K+ EM+ G P YN++I +
Sbjct: 303 EEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARD 362
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
G LD A L +++ D T+T L+ + G V A +F +M GC P+ TF
Sbjct: 363 GMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTF 422
Query: 189 NALINGLCKAGKLDEAHLLFYKMEI-GKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAG 247
NA I GK E +F ++ + G SP D V+ + + G
Sbjct: 423 NAFIKMYGNRGKFTEMMKIFDEINVCGLSP--------------DIVTWNTLLAVFGQNG 468
Query: 248 QTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYG 307
+ ++ +G VP+ +T+N LI+++ + G+ A +++ + G++PD TY
Sbjct: 469 MDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYN 528
Query: 308 TLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLE 363
T++ L R E + K+ M C+P+ Y +L+ GK+I L SL E
Sbjct: 529 TVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEE 584
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 164/367 (44%), Gaps = 25/367 (6%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D + ++++ K+G++ A ++ L+ DG + + Y+SLI F + RY EA +++
Sbjct: 172 DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVF 231
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAE-MIQRGLLPDAHCYNAIIKGFCD 127
+M + G P +I Y ++L G + E M G+ PDA+ YN +I C
Sbjct: 232 KKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLIT-CCK 290
Query: 128 IGQL-DHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAV 186
G L A + E+ +D T+ L+ K +EA ++ N+M G PS V
Sbjct: 291 RGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIV 350
Query: 187 TFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLF--FRLAQGSDHVSDSVSLQKKVEHM 243
T+N+LI+ + G LDEA L +M E G P +F L G + S E M
Sbjct: 351 TYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEM 410
Query: 244 CEAG-----QTLNAY--------------KLLTQLADSGVVPDIKTYNILINSFCKAGNM 284
AG T NA+ K+ ++ G+ PDI T+N L+ F + G
Sbjct: 411 RNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMD 470
Query: 285 NGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKAL 344
+ +FK+++ G P+ T+ TLI R E A + ML P + Y +
Sbjct: 471 SEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTV 530
Query: 345 MTWLCRG 351
+ L RG
Sbjct: 531 LAALARG 537
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 122/500 (24%), Positives = 207/500 (41%), Gaps = 32/500 (6%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
F D T+N LL+ + K + +EA+ +L + +G + Y+SLI + + +EA
Sbjct: 310 FSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAM 369
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
L +M + G PDV Y +L G G+V A+ +F EM G P+ +NA IK +
Sbjct: 370 ELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMY 429
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
+ G+ + EI+ D T L+ + GM E +F +M++ G P
Sbjct: 430 GNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPER 489
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSL------FFRLAQGSDHVSDSVSLQK 238
TFN LI+ + G ++A ++ +M + G +P L LA+G L +
Sbjct: 490 ETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAE 549
Query: 239 KVEHMCEAGQ-----TLNAYK------LLTQLAD---SGVV-PDIKTYNILINSFCKAGN 283
+ C+ + L+AY L+ LA+ SGV+ P L+ K
Sbjct: 550 MEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDL 609
Query: 284 MNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKA 343
+ A + F +L+ +G SPD T +++ R + A + D+M + PS A Y +
Sbjct: 610 LPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNS 669
Query: 344 LMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINA-LEEYFMKGEVERAIRGLLELDFRF 402
LM R + + E L D S N + Y + A R E+
Sbjct: 670 LMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEM---- 725
Query: 403 RDFNLAP----YSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNL 458
R+ + P Y+ + + +EA+ + + + N + ++ G C K N
Sbjct: 726 RNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYC-KLNR 784
Query: 459 YDAVVIFLYSLDKGFELGPK 478
D +F+ L PK
Sbjct: 785 KDEAKLFVEDLRNLDPHAPK 804
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/456 (22%), Positives = 192/456 (42%), Gaps = 37/456 (8%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M + F + T+N L++ + + G L+EA+ L + G + Y++L+ GF +A +
Sbjct: 340 MVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGK 399
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
A S++ M G P++ + ++ N G+ E +K+F E+ GL PD +N
Sbjct: 400 VESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNT 459
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
++ F G + E+ + + T LI + G +A ++ +M G
Sbjct: 460 LLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAG 519
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGK-SP------SLFFRLAQG------- 226
P T+N ++ L + G +++ + +ME G+ P SL A G
Sbjct: 520 VTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMH 579
Query: 227 -------SDHVSDSVSLQKKVEHMCEAGQTL-NAYKLLTQLADSGVVPDIKTYNILINSF 278
S + L K + +C L A + ++L + G PDI T N +++ +
Sbjct: 580 SLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIY 639
Query: 279 CKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHV----C 334
+ + A + ++ +G +P TY +L +Y R D F + +L+ +
Sbjct: 640 GRRQMVAKANGVLDYMKERGFTPSMATYNSL---MYMHSRSAD-FGKSEEILREILAKGI 695
Query: 335 EPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINA-LEEYFMKGEVERAI- 392
+P Y ++ CR ++ A ++ E S D + N + Y E AI
Sbjct: 696 KPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIG 755
Query: 393 --RGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEA 426
R +++ R N Y+ ++ G+C+ + DEA
Sbjct: 756 VVRYMIKHGCR---PNQNTYNSIVDGYCKLNRKDEA 788
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 129/306 (42%), Gaps = 54/306 (17%)
Query: 144 HDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDE 203
+ + D I+I + K+G V A MFN +++ G ++ +LI+ +G+ E
Sbjct: 167 YQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYRE 226
Query: 204 AHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNA-YKLLTQLAD 261
A +F KM E G P+L ++ + + G N L+ ++
Sbjct: 227 AVNVFKKMEEDGCKPTL--------------ITYNVILNVFGKMGTPWNKITSLVEKMKS 272
Query: 262 SGVVPDIKTYNILINSFCKAGNMNG-AFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREE 320
G+ PD TYN LI + CK G+++ A ++F++++ G S D VTY L+D + R +
Sbjct: 273 DGIAPDAYTYNTLI-TCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPK 331
Query: 321 DAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALE 380
+A K+ + M+ + PS Y +L++ R + A L N +
Sbjct: 332 EAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELK---------------NQMA 376
Query: 381 EYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNINI 440
E K +V Y+ LL GF +A KV+ A+ IF + N
Sbjct: 377 EKGTKPDV-------------------FTYTTLLSGFERAGKVESAMSIFEEMR--NAGC 415
Query: 441 NPTSCV 446
P C
Sbjct: 416 KPNICT 421
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 70/140 (50%), Gaps = 1/140 (0%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R F +AT+N L+ + ++ +LR + G + Y+++I + + R
Sbjct: 655 MKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTR 714
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+A ++ M GI+PDVI Y + + + EA+ + MI+ G P+ + YN+
Sbjct: 715 MRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNS 774
Query: 121 IIKGFCDIGQLDHARSLHVE 140
I+ G+C + + D A+ L VE
Sbjct: 775 IVDGYCKLNRKDEAK-LFVE 793
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 158/347 (45%), Gaps = 18/347 (5%)
Query: 5 RFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEA 64
R + T+N L++G+C+ GKLE A ++ ++ D + ++++ G + N A
Sbjct: 401 RCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMA 460
Query: 65 HSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKG 124
+ M K G+ +V+ Y ++ + V +A+ + +M++ G PDA Y A+I G
Sbjct: 461 VVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISG 520
Query: 125 FCDIGQLDHARSLHVEISGHDGLH-DTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFP 183
C + + DH VE G D + +LI C K + EM MEK G P
Sbjct: 521 LCQVRR-DHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKP 579
Query: 184 SAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEH 242
++T+N LI+ K + + +M E G P++ + ++
Sbjct: 580 DSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTV--------------TTYGAVIDA 625
Query: 243 MCEAGQTLNAYKLLTQLA-DSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSP 301
C G+ A KL + S V P+ YNILIN+F K GN A L +++++K + P
Sbjct: 626 YCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRP 685
Query: 302 DSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWL 348
+ TY L L + E K+ D M++ CEP+ + LM L
Sbjct: 686 NVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERL 732
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 171/383 (44%), Gaps = 21/383 (5%)
Query: 5 RFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLE----RDGRGIRLSG--YSSLIDGFFKA 58
+ + D+ T +L+N CK +++EA+ + + DG I+ +++LIDG K
Sbjct: 324 KIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKV 383
Query: 59 RRYNEAHSLYGRM-IKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHC 117
R EA L RM ++ P+ + Y ++ G G++ A ++ + M + + P+
Sbjct: 384 GRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVT 443
Query: 118 YNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQME 177
N I+ G C L+ A +++ + T+ LI C V +A + +M
Sbjct: 444 VNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKML 503
Query: 178 KLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQ 237
+ GC P A + ALI+GLC+ + +A + K++ G F L D ++
Sbjct: 504 EAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGG-----FSL--------DLLAYN 550
Query: 238 KKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLK 297
+ C+ T Y++LT + G PD TYN LI+ F K + ++ + ++
Sbjct: 551 MLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610
Query: 298 GLSPDSVTYGTLIDGLYRVEREEDAFKI-RDHMLKHVCEPSFAVYKALMTWLCRGKKISL 356
GL P TYG +ID V ++A K+ +D L P+ +Y L+ +
Sbjct: 611 GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQ 670
Query: 357 AFSLYLEYLKSLPGRDNDSINAL 379
A SL E + + ++ NAL
Sbjct: 671 ALSLKEEMKMKMVRPNVETYNAL 693
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 111/486 (22%), Positives = 213/486 (43%), Gaps = 67/486 (13%)
Query: 14 NVLLNGFCKQGKLEEAVSLL-RLLERDG--RGIRLSGYSSLIDGFFKARRYNEAH--SLY 68
NV+++ + G +++A +L +L+++ R++ ++ +K R E +L
Sbjct: 189 NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITA-DIVLHEVWKGRLLTEEKIIALI 247
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
R G+ P+ + + L R A + +++++ +A +NA++
Sbjct: 248 SRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRN 307
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGC------F 182
+ L +++ D T ILI +CK V EA E+F +M
Sbjct: 308 MDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIK 367
Query: 183 PSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEH 242
++ FN LI+GLCK G+L EA L +M++ + R A ++V+ ++
Sbjct: 368 ADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEE------RCA------PNAVTYNCLIDG 415
Query: 243 MCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPD 302
C AG+ A ++++++ + + P++ T N ++ C+ +N A F D++ +G+ +
Sbjct: 416 YCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGN 475
Query: 303 SVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLA----- 357
VTY TLI V E A + ML+ C P +Y AL++ LC+ ++ A
Sbjct: 476 VVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVE 535
Query: 358 ------FSLYL--------------------EYLKSL--PGRDNDSI--NALEEYFMKGE 387
FSL L E L + G+ DSI N L +F K +
Sbjct: 536 KLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHK 595
Query: 388 VERAIRGLLELDFRFRDFNLAP----YSILLIGFCQAKKVDEALIIFSVLDEFNININPT 443
++ ++E + R+ L P Y ++ +C ++DEAL +F + + +NP
Sbjct: 596 DFESVERMME---QMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMG-LHSKVNPN 651
Query: 444 SCVHLI 449
+ ++ I
Sbjct: 652 TVIYNI 657
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 112/524 (21%), Positives = 217/524 (41%), Gaps = 72/524 (13%)
Query: 32 LLRLLE-RDGRGIRLSGYSS--LIDGFFKARRYNEAHSLYGRM---IKGGILPDVILYAI 85
LLRL E + I L+ ++ LI F + N++ +Y R+ +K + +V++ +
Sbjct: 136 LLRLYEIAKEKNIPLTVVATNLLIRWFGRMGMVNQSVLVYERLDSNMKNSQVRNVVVDVL 195
Query: 86 MLRGLSNEGRVGEAVKMFAEMIQR-GLLPDAHCYNAIIKGFCDIGQL---DHARSLHVEI 141
+ GL V +A K+ EM+Q+ + P I+ G+L + +L
Sbjct: 196 LRNGL-----VDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIALISRF 250
Query: 142 SGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKL 201
S H ++ T I +CK A ++ + + K A FNAL++ L + +
Sbjct: 251 SSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDI 310
Query: 202 DEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQL- 259
+ L KM E+ P D V+L + +C++ + A ++ ++
Sbjct: 311 SRMNDLVLKMDEVKIRP--------------DVVTLGILINTLCKSRRVDEALEVFEKMR 356
Query: 260 ---ADSGVV--PDIKTYNILINSFCKAGNMNGAFKLFKDLQLKG-LSPDSVTYGTLIDGL 313
D G V D +N LI+ CK G + A +L ++L+ +P++VTY LIDG
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGY 416
Query: 314 YRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDN 373
R + E A ++ M + +P+ ++ +CR +++A +++
Sbjct: 417 CRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMD---------- 466
Query: 374 DSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVL 433
+E+ +KG N+ Y L+ C V++A+ + +
Sbjct: 467 -----MEKEGVKG-------------------NVVTYMTLIHACCSVSNVEKAMYWYEKM 502
Query: 434 DEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKELLECLLVSQDK 493
E + + LISGLC R +DA+ + + GF L + +L L ++
Sbjct: 503 LEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLD-LLAYNMLIGLFCDKNN 561
Query: 494 RKYAIDLIGRMKSRGYRLHKYQYRQTISLLQQLQEGKAVKLFSE 537
+ +++ M+ G + Y IS + ++ ++V+ E
Sbjct: 562 TEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMME 605
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 92/197 (46%), Gaps = 1/197 (0%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
F DL +N+L+ FC + E+ +L +E++G+ Y++LI F K + +
Sbjct: 542 FSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVE 601
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEM-IQRGLLPDAHCYNAIIKG 124
+ +M + G+ P V Y ++ + G + EA+K+F +M + + P+ YN +I
Sbjct: 602 RMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINA 661
Query: 125 FCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPS 184
F +G A SL E+ + T+ L + +K ++ ++M + C P+
Sbjct: 662 FSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPN 721
Query: 185 AVTFNALINGLCKAGKL 201
+T L+ L + +L
Sbjct: 722 QITMEILMERLSGSDEL 738
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 118/516 (22%), Positives = 219/516 (42%), Gaps = 55/516 (10%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D A F ++ GF + ++ +S++ L+ + G L ++S++D K + A +
Sbjct: 111 DDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVK-EDIDIAREFF 169
Query: 69 GR-MIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCD 127
R M+ GI DV Y I+++GLS R+G+ K+ M G+ P+A YN ++ C
Sbjct: 170 TRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCK 229
Query: 128 IGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVT 187
G++ ARSL E+ + + T ILI C + + ++ + + LG P VT
Sbjct: 230 NGKVGRARSLMSEMKEPNDV----TFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVT 285
Query: 188 FNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAG 247
++ LC G++ EA + ++E ++G D V+ V+ C G
Sbjct: 286 VTKVMEVLCNEGRVSEALEVLERVE-----------SKGGK--VDVVACNTLVKGYCALG 332
Query: 248 QTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYG 307
+ A + ++ G +P+++TYN+LI +C G ++ A F D++ + + T+
Sbjct: 333 KMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFN 392
Query: 308 TLIDGLYRVEREEDAFKIRDHMLKH--VCEPSFAVYKALMTWLCRGKKISLAFSLYLEYL 365
TLI GL R +D KI + M V Y ++ + + A L+
Sbjct: 393 TLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKME 452
Query: 366 KSLP---------------GRDNDSINALEE-------------------YFMKGEVERA 391
K P G +D A ++ Y G++E +
Sbjct: 453 KLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEES 512
Query: 392 IRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISG 451
+ + ++ R + ++ ++IGFC+ KV + + E + S L+
Sbjct: 513 LELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEE 572
Query: 452 LCAKRNLYDAVVIFLYSLDKGFELGPKICKELLECL 487
LC K ++ A ++F ++K P + L+ CL
Sbjct: 573 LCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCL 608
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/407 (21%), Positives = 162/407 (39%), Gaps = 61/407 (14%)
Query: 11 ATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGR 70
+N LL+ CK GK+ A SL+ ++ ++ LI + ++ ++ L +
Sbjct: 218 VVYNTLLHALCKNGKVGRARSLMSEMKEPND----VTFNILISAYCNEQKLIQSMVLLEK 273
Query: 71 MIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQ 130
G +PDV+ ++ L NEGRV EA+++ + +G D N ++KG+C +G+
Sbjct: 274 CFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGK 333
Query: 131 LDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNA 190
+ A+ +E+ L + T+ +LI C GM+ A + FN M+ + TFN
Sbjct: 334 MRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNT 393
Query: 191 LIN-------------------------------------GLCKAGKLDEAHLLFYKME- 212
LI G K + ++A KME
Sbjct: 394 LIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEK 453
Query: 213 -IGKSPSLFFRLAQ------------------GSDHVSDSVSLQKKVEHMCEAGQTLNAY 253
++ F+L G V + + + G+ +
Sbjct: 454 LFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESL 513
Query: 254 KLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGL 313
+L+ + G +P T+N +I FCK + K +D+ +G PD+ +Y L++ L
Sbjct: 514 ELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEEL 573
Query: 314 YRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSL 360
+ A+ + M++ P +++ +LM L + I + SL
Sbjct: 574 CVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQKTAIHVNSSL 620
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/402 (21%), Positives = 159/402 (39%), Gaps = 53/402 (13%)
Query: 46 SGYSSLIDGFFKARRYNEAHSLYGRMIKG-GILPDVILYAIMLRGLSNEGRVGEAVKMFA 104
S Y +L RR++ + L M G+ PD ++ ++RG + + +
Sbjct: 77 STYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVD 136
Query: 105 EMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLH-DTCTHTILICEMCKK 163
+ + G+ P +N+I+ +D AR G+H D T+ IL+ +
Sbjct: 137 LVSKFGIKPSLKVFNSILDVLVK-EDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLT 195
Query: 164 GMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRL 223
+ + ++ M+ G P+AV +N L++ LCK GK+ A L +M+ + +
Sbjct: 196 NRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKEPNDVTFNILI 255
Query: 224 AQGSDH------------------VSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVV 265
+ + V D V++ K +E +C G+ A ++L ++ G
Sbjct: 256 SAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGK 315
Query: 266 PDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKI 325
D+ N L+ +C G M A + F +++ KG P+ TY LI G V + A
Sbjct: 316 VDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDT 375
Query: 326 RDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMK 385
+ M +FA + L+ L S+ GR +D + LE
Sbjct: 376 FNDMKTDAIRWNFATFNTLIRGL------------------SIGGRTDDGLKILEMMQDS 417
Query: 386 GEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEAL 427
V A + PY+ ++ GF + + ++AL
Sbjct: 418 DTVHGA--------------RIDPYNCVIYGFYKENRWEDAL 445
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 111/236 (47%), Gaps = 12/236 (5%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDG--RGIRLSGYSSLIDGFFKARRYNEAHS 66
+ ATFN L+ G G+ ++ + +L +++ G R+ Y+ +I GF+K R+ +A
Sbjct: 387 NFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALE 446
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
+M K + P + + L L +G + + + +MI G +P + +I +
Sbjct: 447 FLLKMEK--LFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYS 504
Query: 127 DIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAV 186
G+++ + L ++ L + T +I CK+ V + M + GC P
Sbjct: 505 QHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTE 564
Query: 187 TFNALINGLCKAGKLDEAHLLFYKM---EIGKSPSLF----FRLAQGSD-HVSDSV 234
++N L+ LC G + +A LLF +M I PS++ F L+Q + HV+ S+
Sbjct: 565 SYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQKTAIHVNSSL 620
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 128/303 (42%), Gaps = 33/303 (10%)
Query: 180 GCFPSAVTFNALINGLCKAGKLDEAHLLFYKM--EIGKSP--SLFFRLAQGSDHVSDSVS 235
G S T+ AL + LC + D + L +M IG P ++F + +G
Sbjct: 71 GFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRAR---- 126
Query: 236 LQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLF-KDL 294
L K+V ++ L+++ G+ P +K +N +++ K +++ A + F + +
Sbjct: 127 LIKRV---------ISVVDLVSKF---GIKPSLKVFNSILDVLVKE-DIDIAREFFTRKM 173
Query: 295 QLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKI 354
G+ D TYG L+ GL R D FK+ M P+ VY L+ LC+ K+
Sbjct: 174 MASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKV 233
Query: 355 SLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILL 414
A SL E + ++ + N L + ++ I+ ++ L+ F P + +
Sbjct: 234 GRARSLMSE----MKEPNDVTFNILISAYCNE--QKLIQSMVLLEKCF-SLGFVPDVVTV 286
Query: 415 IG----FCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLD 470
C +V EAL + ++ ++ +C L+ G CA + A F+
Sbjct: 287 TKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMER 346
Query: 471 KGF 473
KG+
Sbjct: 347 KGY 349
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 156/341 (45%), Gaps = 18/341 (5%)
Query: 11 ATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGR 70
T+N L++G+C+ GKLE A ++ ++ D + ++++ G + N A +
Sbjct: 407 VTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMD 466
Query: 71 MIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQ 130
M K G+ +V+ Y ++ + V +A+ + +M++ G PDA Y A+I G C + +
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR 526
Query: 131 LDHARSLHVEISGHDGLH-DTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFN 189
DH VE G D + +LI C K + EM MEK G P ++T+N
Sbjct: 527 -DHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYN 585
Query: 190 ALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQ 248
LI+ K + + +M E G P++ + ++ C G+
Sbjct: 586 TLISFFGKHKDFESVERMMEQMREDGLDPTV--------------TTYGAVIDAYCSVGE 631
Query: 249 TLNAYKLLTQLA-DSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYG 307
A KL + S V P+ YNILIN+F K GN A L +++++K + P+ TY
Sbjct: 632 LDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYN 691
Query: 308 TLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWL 348
L L + E K+ D M++ CEP+ + LM L
Sbjct: 692 ALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERL 732
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 169/370 (45%), Gaps = 30/370 (8%)
Query: 5 RFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLE----RDGRGIRLSG--YSSLIDGFFKA 58
+ + D+ T +L+N CK +++EA+ + + DG I+ +++LIDG K
Sbjct: 324 KIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKV 383
Query: 59 RRYNEAHSLYGRM-IKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHC 117
R EA L RM ++ +P+ + Y ++ G G++ A ++ + M + + P+
Sbjct: 384 GRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVT 443
Query: 118 YNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQME 177
N I+ G C L+ A +++ + T+ LI C V +A + +M
Sbjct: 444 VNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKML 503
Query: 178 KLGCFPSAVTFNALINGLCKAGKLDEA--------------HLLFYKMEIG------KSP 217
+ GC P A + ALI+GLC+ + +A LL Y M IG +
Sbjct: 504 EAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAE 563
Query: 218 SLFFRLA--QGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILI 275
++ L + DS++ + + + +++ Q+ + G+ P + TY +I
Sbjct: 564 KVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVI 623
Query: 276 NSFCKAGNMNGAFKLFKDLQLKG-LSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVC 334
+++C G ++ A KLFKD+ L ++P++V Y LI+ ++ A +++ M +
Sbjct: 624 DAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMV 683
Query: 335 EPSFAVYKAL 344
P+ Y AL
Sbjct: 684 RPNVETYNAL 693
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 185/429 (43%), Gaps = 61/429 (14%)
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
+L R G+ P+ + + L R A + +++++ +A +NA++
Sbjct: 245 ALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCL 304
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGC---- 181
+ L +++ D T ILI +CK V EA E+F QM
Sbjct: 305 GRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGN 364
Query: 182 --FPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKK 239
++ FN LI+GLCK G+L EA L +M++ + V ++V+
Sbjct: 365 VIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEER------------CVPNAVTYNCL 412
Query: 240 VEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGL 299
++ C AG+ A ++++++ + + P++ T N ++ C+ +N A F D++ +G+
Sbjct: 413 IDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGV 472
Query: 300 SPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLA-- 357
+ VTY TLI V E A + ML+ C P +Y AL++ LC+ ++ A
Sbjct: 473 KGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIR 532
Query: 358 ---------FSLYL--------------------EYLKSL--PGRDNDSI--NALEEYFM 384
FSL L E L + G+ DSI N L +F
Sbjct: 533 VVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFG 592
Query: 385 KGEVERAIRGLLELDFRFRDFNLAP----YSILLIGFCQAKKVDEALIIFSVLDEFNINI 440
K + ++ ++E + R+ L P Y ++ +C ++DEAL +F + + +
Sbjct: 593 KHKDFESVERMME---QMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMG-LHSKV 648
Query: 441 NPTSCVHLI 449
NP + ++ I
Sbjct: 649 NPNTVIYNI 657
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/477 (19%), Positives = 205/477 (42%), Gaps = 42/477 (8%)
Query: 80 VILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHV 139
++ +++R G V ++V ++ + + ++ N ++ G +D A +
Sbjct: 152 IVATKLLIRWFGRMGMVNQSVLVYERLDSN--MKNSQVRNVVVDVLLRNGLVDDAFKVLD 209
Query: 140 EISGHDGL--HDTCTHTILICEMCKKGMVREAQ--EMFNQMEKLGCFPSAVTFNALINGL 195
E+ + + + T I++ E+ K+ ++ E + + ++ G P++V I+ L
Sbjct: 210 EMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSL 269
Query: 196 CKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKL 255
CK + + A + + K+P A + + + + M + L
Sbjct: 270 CKNARANTAWDILSDLMKNKTP----LEAPPFNALLSCLGRNMDISRMND---------L 316
Query: 256 LTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKG--------LSPDSVTYG 307
+ ++ + + PD+ T ILIN+ CK+ ++ A ++F+ Q++G + DS+ +
Sbjct: 317 VLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFE--QMRGKRTDDGNVIKADSIHFN 374
Query: 308 TLIDGLYRVEREEDAFKIRDHM-LKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLK 366
TLIDGL +V R ++A ++ M L+ C P+ Y L+ CR K+ A + +
Sbjct: 375 TLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETA-----KEVV 429
Query: 367 SLPGRDNDSINALEEYFMKGEVER------AIRGLLELDFRFRDFNLAPYSILLIGFCQA 420
S D N + + G + R A+ ++++ N+ Y L+ C
Sbjct: 430 SRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSV 489
Query: 421 KKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKIC 480
V++A+ + + E + + LISGLC R +DA+ + + GF L +
Sbjct: 490 SNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLD-LLA 548
Query: 481 KELLECLLVSQDKRKYAIDLIGRMKSRGYRLHKYQYRQTISLLQQLQEGKAVKLFSE 537
+L L ++ + +++ M+ G + Y IS + ++ ++V+ E
Sbjct: 549 YNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMME 605
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 92/197 (46%), Gaps = 1/197 (0%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
F DL +N+L+ FC + E+ +L +E++G+ Y++LI F K + +
Sbjct: 542 FSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVE 601
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEM-IQRGLLPDAHCYNAIIKG 124
+ +M + G+ P V Y ++ + G + EA+K+F +M + + P+ YN +I
Sbjct: 602 RMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINA 661
Query: 125 FCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPS 184
F +G A SL E+ + T+ L + +K ++ ++M + C P+
Sbjct: 662 FSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPN 721
Query: 185 AVTFNALINGLCKAGKL 201
+T L+ L + +L
Sbjct: 722 QITMEILMERLSGSDEL 738
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 156/338 (46%), Gaps = 24/338 (7%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R + + TF +L+ + + G EAV +E G +S +I + RR
Sbjct: 177 MKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRR 236
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+EA S + + K PDVI+Y ++RG G + EA K+F EM G+ P+ + Y+
Sbjct: 237 ASEAQSFFDSL-KDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSI 295
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I C GQ+ A + ++ + T L+ K G + +++NQM+KLG
Sbjct: 296 VIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLG 355
Query: 181 CFPSAVTFNALINGLCKAGKLDEA-----HLLFYKMEIGKSP-SLFFRLAQGSDHVSDSV 234
C P +T+N LI C+ L+ A ++ K E+ S + FR + V+ +
Sbjct: 356 CEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAH 415
Query: 235 SL-QKKVEHMCEAGQ-TLN--------------AYKLLTQLADSGVVPDIKTYNILINSF 278
+ K +E CE T N K+ ++ D V P++ TY +L+ F
Sbjct: 416 RMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMF 475
Query: 279 CKAGNMNGAFKLFKDL-QLKGLSPDSVTYGTLIDGLYR 315
C G+ N A+KLFK++ + K L+P Y ++ L R
Sbjct: 476 CGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRR 513
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 165/355 (46%), Gaps = 16/355 (4%)
Query: 13 FNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMI 72
+N +++ K + + A L+ L++ I + ++ LI + +A +EA + RM
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 73 KGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLD 132
G +PD I ++I++ LS + R EA F + R PD Y +++G+C G++
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEIS 272
Query: 133 HARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALI 192
A + E+ + T++I+I +C+ G + A ++F M GC P+A+TFN L+
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLM 332
Query: 193 NGLCKAGKLDEAHLLFYKME-IGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLN 251
KAG+ ++ ++ +M+ +G P D+++ +E C N
Sbjct: 333 RVHVKAGRTEKVLQVYNQMKKLGCEP--------------DTITYNFLIEAHCRDENLEN 378
Query: 252 AYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLID 311
A K+L + + T+N + K ++NGA +++ + P++VTY L+
Sbjct: 379 AVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMR 438
Query: 312 GLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLK 366
+ + K++ M EP+ Y+ L+T C + A+ L+ E ++
Sbjct: 439 MFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVE 493
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 157/362 (43%), Gaps = 35/362 (9%)
Query: 115 AHCYNAIIKGFCDIGQLDHA-------RSLHVEISGHDGLHDTCTHTILICEMCKKGMVR 167
H YN +I + Q D A +S +VEIS T TILI + G+
Sbjct: 151 PHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIE-------TFTILIRRYVRAGLAS 203
Query: 168 EAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGS 227
EA FN+ME GC P + F+ +I+ L + + EA F ++ P
Sbjct: 204 EAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEP---------- 253
Query: 228 DHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGA 287
D + V C AG+ A K+ ++ +G+ P++ TY+I+I++ C+ G ++ A
Sbjct: 254 ----DVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRA 309
Query: 288 FKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTW 347
+F D+ G +P+++T+ L+ + R E ++ + M K CEP Y L+
Sbjct: 310 HDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEA 369
Query: 348 LCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNL 407
CR + + A + +K + + N + Y E +R + G + + +
Sbjct: 370 HCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYI---EKKRDVNGAHRMYSKMMEAKC 426
Query: 408 AP----YSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVV 463
P Y+IL+ F +K D L + +D+ + N + L++ C + +A
Sbjct: 427 EPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYK 486
Query: 464 IF 465
+F
Sbjct: 487 LF 488
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 112/433 (25%), Positives = 202/433 (46%), Gaps = 23/433 (5%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
F D+ T+ +++N CK+ + A +++ +E G ++ YSS+I K R EA
Sbjct: 543 FVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAE 602
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
+ +M++ GI PD I Y IM+ + GR+ EA ++ E+++ L P + Y +I GF
Sbjct: 603 ETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGF 662
Query: 126 CDIGQLDHARSLHVEISGHDGLH-DTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPS 184
+G ++ +++ DGL + +T LI KKG + + +F M +
Sbjct: 663 VKMGMMEKG-CQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHD 721
Query: 185 AVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMC 244
+ + L++GL +A + + +E GK L RL + VS SL
Sbjct: 722 HIAYITLLSGLWRAMARKKKRQVI--VEPGKE-KLLQRLIRTKPLVSIPSSLGN------ 772
Query: 245 EAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSV 304
G A +++ ++ S ++P++ +N +I +C AG ++ A+ + +Q +G+ P+ V
Sbjct: 773 -YGSKSFAMEVIGKVKKS-IIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLV 830
Query: 305 TYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEY 364
TY L+ E A D CEP +Y L+ LC K+ A +L LE
Sbjct: 831 TYTILMKSHIEAGDIESAI---DLFEGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEM 887
Query: 365 LKSLPGRDNDSINALEEYF----MKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQA 420
KS + DS L + + E + ++ + LD R N ++ L+ C+
Sbjct: 888 QKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSIN---HTWLIYILCEE 944
Query: 421 KKVDEALIIFSVL 433
KK+ EA +F+++
Sbjct: 945 KKLREARALFAIM 957
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 113/503 (22%), Positives = 212/503 (42%), Gaps = 53/503 (10%)
Query: 3 MRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYN 62
M R + + L FCK+G EA +L +E DG + Y+ L+ + K
Sbjct: 230 MTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMT 289
Query: 63 EAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAII 122
A LY RM++ D ++ ++ G G + + MF++MI++G+ + Y+ +I
Sbjct: 290 MAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMI 349
Query: 123 KGFCDIGQLDHARSLHVEISGHDGL-HDTCTHTILICEMCKKGMVREAQEMFNQMEKLGC 181
+C G +D+A L V +G + + + +T LI KKG + +A ++ +M G
Sbjct: 350 GSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGI 409
Query: 182 FPSAVTFNALINGLCKAGKLDEAHLLFYKM-------------EIG----KSPSLFFRLA 224
P +T+ L+ L K +L A ++ + ++G K SL +A
Sbjct: 410 VPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIA 469
Query: 225 Q--------GSDHVSDSVSLQK-------KVEHMCEAGQTLNAY---------------- 253
+ G V+ ++ Q+ ++E M G T +
Sbjct: 470 RKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIE 529
Query: 254 ---KLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLI 310
L+ + + VPD+ TY I++N CK + + AF + ++ GL P Y ++I
Sbjct: 530 DLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSII 589
Query: 311 DGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPG 370
L + R +A + ML+ +P Y ++ R +I A L E +K
Sbjct: 590 GSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLR 649
Query: 371 RDNDSINALEEYFMK-GEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALII 429
+ + L F+K G +E+ + L ++ N+ Y+ L+ F + + +
Sbjct: 650 PSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTL 709
Query: 430 FSVLDEFNININPTSCVHLISGL 452
F ++ E +I + + + L+SGL
Sbjct: 710 FGLMGENDIKHDHIAYITLLSGL 732
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 131/590 (22%), Positives = 234/590 (39%), Gaps = 111/590 (18%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSG----YSSLIDGFF 56
M + Q ++ T+++++ +CK+G ++ A LRL + +S Y++LI GF+
Sbjct: 333 MIKKGVQSNVFTYHIMIGSYCKEGNVDYA---LRLFVNNTGSEDISRNVHCYTNLIFGFY 389
Query: 57 KARRYNEAHSLYGRMIKGGI-------------LPD--------VILYAIMLRGL----- 90
K ++A L RM+ GI LP VIL +I+ G
Sbjct: 390 KKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPP 449
Query: 91 -----------------------SNEGRVGEAVKMFA---------------EMIQRGLL 112
+N VG AV A +M+ G
Sbjct: 450 VIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCT 509
Query: 113 PDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEM 172
P YN++IK ++ SL I D + D T+ I++ E+CKK A +
Sbjct: 510 PLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAI 569
Query: 173 FNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFF---------- 221
+ ME+LG P+ ++++I L K G++ EA F KM E G P
Sbjct: 570 IDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYAR 629
Query: 222 --RLAQGSDHVSD---------SVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKT 270
R+ + ++ V + S + + + G + L ++ + G+ P++
Sbjct: 630 NGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVL 689
Query: 271 YNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKI----- 325
Y LI F K G+ +F LF + + D + Y TL+ GL+R + ++
Sbjct: 690 YTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPG 749
Query: 326 RDHMLKHV--CEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYF 383
++ +L+ + +P ++ +L + G K S A + + KS+ + Y
Sbjct: 750 KEKLLQRLIRTKPLVSIPSSLGNY---GSK-SFAMEVIGKVKKSIIPNLYLHNTIITGYC 805
Query: 384 MKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPT 443
G ++ A L + NL Y+IL+ +A ++ A+ +F N P
Sbjct: 806 AAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFE-----GTNCEPD 860
Query: 444 SCVH--LISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKELLECLLVSQ 491
++ L+ GLC + DA+ + L G ++LL+CL S+
Sbjct: 861 QVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSR 910
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 98/461 (21%), Positives = 186/461 (40%), Gaps = 60/461 (13%)
Query: 16 LLNGFCKQGKLEEAVSLLRLL------------------------------------ERD 39
L G C G L EA+ +L L E D
Sbjct: 207 LFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVD 266
Query: 40 GRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEA 99
G + Y+ L+ + K A LY RM++ D ++ ++ G G + +
Sbjct: 267 GYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKG 326
Query: 100 VKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGL-HDTCTHTILIC 158
MF++MI++G+ + Y+ +I +C G +D+A L V +G + + + +T LI
Sbjct: 327 RVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIF 386
Query: 159 EMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM------- 211
KKG + +A ++ +M G P +T+ L+ L K +L A ++ +
Sbjct: 387 GFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGI 446
Query: 212 ------EIG----KSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLAD 261
++G K SL +A+ +++ +V L +C + A + ++ +
Sbjct: 447 NPPVIDDLGNIEVKVESLLGEIARKDANLA-AVGLAVVTTALCSQRNYIAALSRIEKMVN 505
Query: 262 SGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREED 321
G P +YN +I + + L +Q PD TY +++ L + +
Sbjct: 506 LGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDA 565
Query: 322 AFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSIN---A 378
AF I D M + P+ A+Y +++ L + ++ A + + L+S G D I
Sbjct: 566 AFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLES--GIQPDEIAYMIM 623
Query: 379 LEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQ 419
+ Y G ++ A + E+ F + Y++L+ GF +
Sbjct: 624 INTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVK 664
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 169/432 (39%), Gaps = 70/432 (16%)
Query: 42 GIRL--SGYSSLIDGFFKARRYNEAHSLYG-RMIKGGILPD------VILYAIMLR---- 88
GI L S Y +LI + + A + Y R+I GI+PD ++ + LR
Sbjct: 90 GIELDSSCYGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDE 149
Query: 89 -------------------------GLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIK 123
L N+ R EA F ++ +RG C + K
Sbjct: 150 ARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFK 209
Query: 124 GFCDIGQLDHARSLHVEISGHD--GLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGC 181
G C G L+ A + + G L ++ C CK+G EA+ +F+ ME G
Sbjct: 210 GLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYC-FCKRGCAAEAEALFDHMEVDGY 268
Query: 182 FPSAVTFNALINGLCKAGKLDEAHLLFYKM---EIGKSPSLFFRLAQGSDHVSDSVSLQK 238
+ V + L+ CK + A L+ +M P +F L G +
Sbjct: 269 YVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLG------- 321
Query: 239 KVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLF-KDLQLK 297
M + G+ + +Q+ GV ++ TY+I+I S+CK GN++ A +LF + +
Sbjct: 322 ----MLDKGRV-----MFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSE 372
Query: 298 GLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLA 357
+S + Y LI G Y+ + A + ML + P Y L+ L + ++ A
Sbjct: 373 DISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYA 432
Query: 358 FSLYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPY--SILLI 415
+ L + G + I+ L G +E + LL + +D NLA +++
Sbjct: 433 MVILQSILDNGCGINPPVIDDL------GNIEVKVESLLG-EIARKDANLAAVGLAVVTT 485
Query: 416 GFCQAKKVDEAL 427
C + AL
Sbjct: 486 ALCSQRNYIAAL 497
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 85/172 (49%), Gaps = 3/172 (1%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
+L N ++ G+C G+L+EA + L ++++G L Y+ L+ +A A L+
Sbjct: 793 NLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLF 852
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
PD ++Y+ +L+GL + R +A+ + EM + G+ P+ Y +++ C
Sbjct: 853 E---GTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYS 909
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
A + +++ D + HT LI +C++ +REA+ +F M + G
Sbjct: 910 RLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSG 961
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/388 (19%), Positives = 157/388 (40%), Gaps = 34/388 (8%)
Query: 85 IMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVE-ISG 143
++ R + + EA + + G+ D+ CY A+I+ ++GQ A + + + + G
Sbjct: 65 VIRRVIDGSSSISEAALVADFAVDNGIELDSSCYGALIRKLTEMGQPGVAETFYNQRVIG 124
Query: 144 HDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDE 203
+ + D+ ++ + K EA+ +++ G PS + + +++ LC + E
Sbjct: 125 NGIVPDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLE 184
Query: 204 AHLLFYKM-EIGKSPSLF-----FRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYK--- 254
A F ++ E G L+ F+ G H+++++ + + M +N YK
Sbjct: 185 AFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLF 244
Query: 255 --------------LLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLS 300
L + G D Y L+ +CK NM A +L+ + +
Sbjct: 245 YCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFE 304
Query: 301 PDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSL 360
D + TLI G ++ + + M+K + + Y ++ C+ + A L
Sbjct: 305 LDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRL 364
Query: 361 YLEYLKSLPGRDNDS--INALEEYFMKGEVERAIRGLLELDFRFRDFNLAP----YSILL 414
++ S N N + ++ KG +++A+ +L R D + P Y +LL
Sbjct: 365 FVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAV----DLLMRMLDNGIVPDHITYFVLL 420
Query: 415 IGFCQAKKVDEALIIFSVLDEFNININP 442
+ ++ A++I + + INP
Sbjct: 421 KMLPKCHELKYAMVILQSILDNGCGINP 448
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 169/405 (41%), Gaps = 58/405 (14%)
Query: 1 MWMRR------FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDG 54
+W+R+ L T N LLNG CK G +E+A L+R + G Y++LI G
Sbjct: 141 LWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKG 200
Query: 55 FFKARRYNEAHSLYGRMIKGGILP------------------------------------ 78
++A L+ M K GI P
Sbjct: 201 LCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQAN 260
Query: 79 ---DVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHAR 135
D+++ I++ G V +A++++ EM Q+ + D+ YN II+G C G + A
Sbjct: 261 APLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAY 320
Query: 136 SLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGL 195
++ D T+ LI +CK+G EA ++ M+ G P +++ +I GL
Sbjct: 321 GFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGL 380
Query: 196 CKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKL 255
C G ++ A+ F S + + + ++ G T +A +
Sbjct: 381 CIHGDVNRAN-------------EFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSV 427
Query: 256 LTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYR 315
L + GV P++ T N LI+ + K G + A+ + +++ + PD+ TY L+
Sbjct: 428 LNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACT 487
Query: 316 VEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSL 360
+ AF++ D ML+ C+P Y L+ LC ++ A SL
Sbjct: 488 LGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESL 532
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 143/312 (45%), Gaps = 26/312 (8%)
Query: 11 ATFNVL----LNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
A FNVL + + L E+V + + D LS +SS++ + + A
Sbjct: 86 AIFNVLDYILKSSLDRLASLRESVCQTKSFDYDDC---LSIHSSIMRDLCLQGKLDAALW 142
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
L +MI G++P +I + +L GL G + +A + EM + G P+ YN +IKG C
Sbjct: 143 LRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLC 202
Query: 127 DIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMV-----REAQEMFNQMEKLGC 181
+ +D A L ++ + + T I++ +C+KG++ + +E+ + +
Sbjct: 203 SVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAP 262
Query: 182 FPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVE 241
V L++ K G + +A ++ +M P +DSV +
Sbjct: 263 L-DIVICTILMDSCFKNGNVVQALEVWKEMSQKNVP-------------ADSVVYNVIIR 308
Query: 242 HMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSP 301
+C +G + AY + + GV PD+ TYN LI++ CK G + A L +Q G++P
Sbjct: 309 GLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAP 368
Query: 302 DSVTYGTLIDGL 313
D ++Y +I GL
Sbjct: 369 DQISYKVIIQGL 380
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 115/247 (46%), Gaps = 35/247 (14%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M + D +NV++ G C G + A + + + G + Y++LI K +
Sbjct: 291 MSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGK 350
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGL--------SNE------------------- 93
++EA L+G M GG+ PD I Y ++++GL +NE
Sbjct: 351 FDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNV 410
Query: 94 -----GRVGE---AVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHD 145
GR G+ A+ + M+ G+ P+ + NA+I G+ G+L A + E+
Sbjct: 411 VIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTK 470
Query: 146 GLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAH 205
DT T+ +L+ C G +R A +++++M + GC P +T+ L+ GLC G+L +A
Sbjct: 471 IHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAE 530
Query: 206 LLFYKME 212
L +++
Sbjct: 531 SLLSRIQ 537
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 124/268 (46%), Gaps = 9/268 (3%)
Query: 82 LYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEI 141
+++ ++R L +G++ A+ + +MI G++P +N ++ G C G ++ A L E+
Sbjct: 123 IHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREM 182
Query: 142 SGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKL 201
+ ++ LI +C V +A +FN M K G P+ VT N +++ LC+ G +
Sbjct: 183 REMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVI 242
Query: 202 DEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLAD 261
+ + + S + + D V ++ + G + A ++ +++
Sbjct: 243 GNNNKKLLEEILDSSQA---------NAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQ 293
Query: 262 SGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREED 321
V D YN++I C +GNM A+ D+ +G++PD TY TLI L + + ++
Sbjct: 294 KNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDE 353
Query: 322 AFKIRDHMLKHVCEPSFAVYKALMTWLC 349
A + M P YK ++ LC
Sbjct: 354 ACDLHGTMQNGGVAPDQISYKVIIQGLC 381
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 106/245 (43%), Gaps = 35/245 (14%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDG------------RGIRLSG- 47
M R D+ T+N L++ CK+GK +EA L ++ G +G+ + G
Sbjct: 326 MVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGD 385
Query: 48 ----------------------YSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAI 85
++ +IDG+ + + A S+ M+ G+ P+V
Sbjct: 386 VNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNA 445
Query: 86 MLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHD 145
++ G GR+ +A + EM + PD YN ++ C +G L A L+ E+
Sbjct: 446 LIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRG 505
Query: 146 GLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAH 205
D T+T L+ +C KG +++A+ + ++++ G V F L + + EA+
Sbjct: 506 CQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAY 565
Query: 206 LLFYK 210
L++ K
Sbjct: 566 LVYKK 570
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 164/355 (46%), Gaps = 16/355 (4%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D+ T+N L+ G+ + ++EA ++ R + G ++ Y+SLI G K N L+
Sbjct: 47 DVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLF 106
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQ-RGLLPDAHCYNAIIKGFCD 127
M+ G+ PD+ Y ++ GR GEA K+ E I GL+P YN ++ C
Sbjct: 107 DEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCK 166
Query: 128 IGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVT 187
G D+A L + + T+ ILI +CK V M +++K G P+AVT
Sbjct: 167 SGHTDNAIELFKHLKSRVK-PELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVT 225
Query: 188 FNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAG 247
+ ++ K ++++ LF KM + + D + V + + G
Sbjct: 226 YTTMLKMYFKTKRIEKGLQLFLKM-------------KKEGYTFDGFANCAVVSALIKTG 272
Query: 248 QTLNAYKLLTQLADSGV-VPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTY 306
+ AY+ + +L SG DI +YN L+N + K GN++ L +++++KGL PD T+
Sbjct: 273 RAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTH 332
Query: 307 GTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLY 361
+++GL + A K + + +PS L+ LC+ + A L+
Sbjct: 333 TIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLF 387
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 121/261 (46%), Gaps = 18/261 (6%)
Query: 5 RFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEA 64
R + +L T+N+L+NG CK ++ ++R L++ G Y++++ +FK +R +
Sbjct: 183 RVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKG 242
Query: 65 HSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLP-DAHCYNAIIK 123
L+ +M K G D ++ L GR EA + E+++ G D YN ++
Sbjct: 243 LQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLN 302
Query: 124 GFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFP 183
+ G LD L EI D THTI++ + G A++ + ++G P
Sbjct: 303 LYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQP 362
Query: 184 SAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHM 243
S VT N LI+GLCKAG +D A LF ME V D + V ++
Sbjct: 363 SVVTCNCLIDGLCKAGHVDRAMRLFASME-----------------VRDEFTYTSVVHNL 405
Query: 244 CEAGQTLNAYKLLTQLADSGV 264
C+ G+ + A KLL + G+
Sbjct: 406 CKDGRLVCASKLLLSCYNKGM 426
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 166/373 (44%), Gaps = 23/373 (6%)
Query: 99 AVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILIC 158
A + + I+ G+LPD YN +IKG+ +D A ++ + D T+ LI
Sbjct: 32 AETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLIS 91
Query: 159 EMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPS 218
K M+ ++F++M G P ++N L++ K G+ EA
Sbjct: 92 GAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEA-------------- 137
Query: 219 LFFRLAQGSDHVSDSV----SLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNIL 274
F++ H++ V + ++ +C++G T NA +L L S V P++ TYNIL
Sbjct: 138 --FKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL-KSRVKPELMTYNIL 194
Query: 275 INSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVC 334
IN CK+ + + ++L+ G +P++VTY T++ ++ +R E ++ M K
Sbjct: 195 INGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGY 254
Query: 335 EPSFAVYKALMTWLCRGKKISLAFSLYLEYLKS-LPGRDNDSINA-LEEYFMKGEVERAI 392
A+++ L + + A+ E ++S +D S N L YF G ++
Sbjct: 255 TFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVD 314
Query: 393 RGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGL 452
L E++ + + ++I++ G A + + E + + +C LI GL
Sbjct: 315 DLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGL 374
Query: 453 CAKRNLYDAVVIF 465
C ++ A+ +F
Sbjct: 375 CKAGHVDRAMRLF 387
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 129/305 (42%), Gaps = 23/305 (7%)
Query: 12 TFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRM 71
T+N+LL+ CK G + A+ L + L+ + L Y+ LI+G K+RR + +
Sbjct: 156 TYNILLDALCKSGHTDNAIELFKHLKSRVKP-ELMTYNILINGLCKSRRVGSVDWMMREL 214
Query: 72 IKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQL 131
K G P+ + Y ML+ R+ + +++F +M + G D A++ G+
Sbjct: 215 KKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRA 274
Query: 132 DHA-RSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNA 190
+ A +H + D ++ L+ K G + ++ ++E G P T
Sbjct: 275 EEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTI 334
Query: 191 LINGLCKAGKLD--EAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQ 248
++NGL G E HL E+G PS+ V+ ++ +C+AG
Sbjct: 335 IVNGLLNIGNTGGAEKHLACIG-EMGMQPSV--------------VTCNCLIDGLCKAGH 379
Query: 249 TLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGT 308
A +L + V D TY ++++ CK G + A KL KG+ S
Sbjct: 380 VDRAMRLFASME----VRDEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIPSSARRA 435
Query: 309 LIDGL 313
++ G+
Sbjct: 436 VLSGI 440
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 119/251 (47%), Gaps = 26/251 (10%)
Query: 155 ILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EI 213
I + +CK + A+ + +LG P +T+N LI G + +DEA+ + +M E
Sbjct: 18 ISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREA 77
Query: 214 GKSP--SLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTY 271
G P + + L G+ + ++ L + ++ L ++ SG+ PD+ +Y
Sbjct: 78 GIEPDVTTYNSLISGA---AKNLMLNRVLQ-------------LFDEMLHSGLSPDMWSY 121
Query: 272 NILINSFCKAGNMNGAFK-LFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHML 330
N L++ + K G AFK L +D+ L GL P TY L+D L + ++A ++ H L
Sbjct: 122 NTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKH-L 180
Query: 331 KHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSI---NALEEYFMKGE 387
K +P Y L+ LC+ +++ + E KS G +++ L+ YF
Sbjct: 181 KSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKS--GYTPNAVTYTTMLKMYFKTKR 238
Query: 388 VERAIRGLLEL 398
+E+ ++ L++
Sbjct: 239 IEKGLQLFLKM 249
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 114/258 (44%), Gaps = 28/258 (10%)
Query: 182 FPSAVT--FNALINGLCKAGKLDEAH-LLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQK 238
FP T N +N LCK L+ A LL + +G P D ++
Sbjct: 8 FPGISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLP--------------DVITYNT 53
Query: 239 KVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKG 298
++ AY + ++ ++G+ PD+ TYN LI+ K +N +LF ++ G
Sbjct: 54 LIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSG 113
Query: 299 LSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCE--PSFAVYKALMTWLCRGKKISL 356
LSPD +Y TL+ +++ R +AFKI H H+ P Y L+ LC+
Sbjct: 114 LSPDMWSYNTLMSCYFKLGRHGEAFKIL-HEDIHLAGLVPGIDTYNILLDALCKSGHTDN 172
Query: 357 AFSLYLEYLKSLPGRD----NDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSI 412
A L+ ++LKS + N IN L + G V+ +R EL N Y+
Sbjct: 173 AIELF-KHLKSRVKPELMTYNILINGLCKSRRVGSVDWMMR---ELKKSGYTPNAVTYTT 228
Query: 413 LLIGFCQAKKVDEALIIF 430
+L + + K++++ L +F
Sbjct: 229 MLKMYFKTKRIEKGLQLF 246
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 193/420 (45%), Gaps = 15/420 (3%)
Query: 8 RDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKAR-RYNEAHS 66
R + ++ L+N + + G+ E ++ LL ++ + + Y+++I+ + +
Sbjct: 174 RSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLG 233
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
L+ M GI PD++ Y +L + G EA +F M G++PD Y+ +++ F
Sbjct: 234 LFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFG 293
Query: 127 DIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAV 186
+ +L+ L E++ L D ++ +L+ K G ++EA +F+QM+ GC P+A
Sbjct: 294 KLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNAN 353
Query: 187 TFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEA 246
T++ L+N ++G+ D+ LF +M + S+ D+ + +E E
Sbjct: 354 TYSVLLNLFGQSGRYDDVRQLFLEM-------------KSSNTDPDAATYNILIEVFGEG 400
Query: 247 GQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTY 306
G L + + + PD++TY +I + K G A K+ + + + P S Y
Sbjct: 401 GYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAY 460
Query: 307 GTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLK 366
+I+ + E+A + M + PS + +L+ RG + + ++ +
Sbjct: 461 TGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVD 520
Query: 367 SLPGRDNDSINA-LEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDE 425
S R+ D+ NA +E Y G+ E A++ ++++ D + +L + A+ VDE
Sbjct: 521 SGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDE 580
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 151/340 (44%), Gaps = 13/340 (3%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
Q D+ T+N LL+ +G +EA + R + G L+ YS L++ F K RR +
Sbjct: 244 QPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCD 303
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
L G M GG LPD+ Y ++L + G + EA+ +F +M G P+A+ Y+ ++ F
Sbjct: 304 LLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFG 363
Query: 127 DIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAV 186
G+ D R L +E+ + D T+ ILI + G +E +F+ M + P
Sbjct: 364 QSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDME 423
Query: 187 TFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEA 246
T+ +I K G ++A + M +D V S + +E +A
Sbjct: 424 TYEGIIFACGKGGLHEDARKILQYM-------------TANDIVPSSKAYTGVIEAFGQA 470
Query: 247 GQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTY 306
A + + G P I+T++ L+ SF + G + + + L G+ + T+
Sbjct: 471 ALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTF 530
Query: 307 GTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMT 346
I+ + + E+A K M K C+P +A+++
Sbjct: 531 NAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLS 570
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 167/372 (44%), Gaps = 25/372 (6%)
Query: 78 PDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSL 137
P+ +Y IM+ L EG + + +++F EM +G+ Y A+I + G+ + + L
Sbjct: 139 PNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLEL 198
Query: 138 HVEISGHDGLHDTCTHTILICEMCKKGMVREA-QEMFNQMEKLGCFPSAVTFNALINGLC 196
+ T+ +I + G+ E +F +M G P VT+N L++
Sbjct: 199 LDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACA 258
Query: 197 KAGKLDEAHLLFYKMEIGK-SPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKL 255
G DEA ++F M G P L H+ ++ +++E +C+ L
Sbjct: 259 IRGLGDEAEMVFRTMNDGGIVPDL-----TTYSHLVETFGKLRRLEKVCD---------L 304
Query: 256 LTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYR 315
L ++A G +PDI +YN+L+ ++ K+G++ A +F +Q G +P++ TY L++ +
Sbjct: 305 LGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQ 364
Query: 316 VEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDS 375
R +D ++ M +P A Y L+ G +L+ + ++ D ++
Sbjct: 365 SGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMET 424
Query: 376 INALEEYFMKGEVERAIRGLLELDFRFRDFNLAP----YSILLIGFCQAKKVDEALIIFS 431
+ KG + R +L+ ++ P Y+ ++ F QA +EAL+ F+
Sbjct: 425 YEGIIFACGKGGLHEDARKILQY---MTANDIVPSSKAYTGVIEAFGQAALYEEALVAFN 481
Query: 432 VLDEFNININPT 443
+ E + NP+
Sbjct: 482 TMHE--VGSNPS 491
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/296 (19%), Positives = 124/296 (41%), Gaps = 12/296 (4%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
+ D+ T+ ++ K G E+A +L+ + + Y+ +I+ F +A Y EA
Sbjct: 419 EPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALV 478
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
+ M + G P + + +L + G V E+ + + ++ G+ + +NA I+ +
Sbjct: 479 AFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYK 538
Query: 127 DIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAV 186
G+ + A +V++ D T ++ +V E +E F +M+ PS +
Sbjct: 539 QGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIM 598
Query: 187 TFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEA 246
+ ++ K + D+ + L +M + ++ + Q D S + VE+
Sbjct: 599 CYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEY---- 654
Query: 247 GQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPD 302
+L +L G I+ YN L+++ G A ++ + +GL P+
Sbjct: 655 --------VLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGLFPE 702
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 124/511 (24%), Positives = 226/511 (44%), Gaps = 25/511 (4%)
Query: 12 TFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRM 71
T+N++L GF +LE A+ ++ G + ++++I+GF + ++ +EA L+ M
Sbjct: 257 TYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEM 316
Query: 72 IKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQL 131
I P V+ Y M++G RV + +++F EM G+ P+A Y+ ++ G CD G++
Sbjct: 317 KGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKM 376
Query: 132 DHARS-LHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNA 190
A++ L ++ H D L+ K G + A E+ M L A +
Sbjct: 377 VEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGV 436
Query: 191 LINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKK-----VEHMCE 245
LI CKA + A L + I K L + D++ ++ +E++C
Sbjct: 437 LIENQCKASAYNRAIKLLDTL-IEKEIILRHQ---------DTLEMEPSAYNPIIEYLCN 486
Query: 246 AGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVT 305
GQT A L QL G V D N LI K GN + ++++ K + +G+ +S
Sbjct: 487 NGQTAKAEVLFRQLMKRG-VQDQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNA 545
Query: 306 YGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYL 365
Y LI DA D M++ P +++++++ L ++ A + + +
Sbjct: 546 YELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMIMI 605
Query: 366 -KSLPGRDNDSINA--LEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKK 422
K++ DN + A LE M+G VE A L +D ++ + A LL + K
Sbjct: 606 DKNVGIEDNMDLIAKILEALLMRGHVEEA---LGRIDLLNQNGHTADLDSLLSVLSEKGK 662
Query: 423 VDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKE 482
AL + E ++++ +S ++ L +A + ++KG K E
Sbjct: 663 TIAALKLLDFGLERDLSLEFSSYDKVLDALLGAGKTLNAYSVLCKIMEKGSSTDWKSSDE 722
Query: 483 LLECLLVSQDKRKYAIDLIGRMKSRGYRLHK 513
L++ L +Q+ D++ RM +G + K
Sbjct: 723 LIKSL--NQEGNTKQADVLSRMIKKGQGIKK 751
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 170/396 (42%), Gaps = 34/396 (8%)
Query: 95 RVGEAVKMFAEMIQRGLLP-DAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTH 153
++ A++ F + GL+ D + +IK ++ +L+HAR + +++ D
Sbjct: 129 KLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMF 188
Query: 154 TILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEI 213
+LI K G+V+E+ ++F +M+ LG + ++N+L + + G+ A F KM
Sbjct: 189 VVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKM-- 246
Query: 214 GKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLN-----AYKLLTQLADSGVVPDI 268
VS+ V + ++ G L+ A + + G+ PD
Sbjct: 247 ----------------VSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDD 290
Query: 269 KTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDH 328
T+N +IN FC+ M+ A KLF +++ + P V+Y T+I G V+R +D +I +
Sbjct: 291 ATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEE 350
Query: 329 MLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYL-KSLPGRDNDS-INALEEYFMKG 386
M EP+ Y L+ LC K+ A ++ + K + +DN + L G
Sbjct: 351 MRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAG 410
Query: 387 EVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNI-------- 438
++ A L + Y +L+ C+A + A+ + L E I
Sbjct: 411 DMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTL 470
Query: 439 NINPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFE 474
+ P++ +I LC A V+F + +G +
Sbjct: 471 EMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ 506
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 116/287 (40%), Gaps = 53/287 (18%)
Query: 3 MRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYN 62
M+R +D N L+ G K+G + + +L+++ R G + Y LI +
Sbjct: 501 MKRGVQDQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPG 560
Query: 63 EAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAII 122
+A + M++ G +PD L+ ++ L +GRV A ++ MI + +
Sbjct: 561 DAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMIMIDKNV----------- 609
Query: 123 KGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICE-MCKKGMVREAQEMFNQMEKLGC 181
G+ D I E + +G V EA +++ L
Sbjct: 610 -----------------------GIEDNMDLIAKILEALLMRGHVEEA---LGRIDLLNQ 643
Query: 182 FPSAVTFNALINGLCKAGKLDEA-HLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKV 240
++L++ L + GK A LL + +E + SL F S K +
Sbjct: 644 NGHTADLDSLLSVLSEKGKTIAALKLLDFGLE--RDLSLEFS------------SYDKVL 689
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGA 287
+ + AG+TLNAY +L ++ + G D K+ + LI S + GN A
Sbjct: 690 DALLGAGKTLNAYSVLCKIMEKGSSTDWKSSDELIKSLNQEGNTKQA 736
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 190/425 (44%), Gaps = 50/425 (11%)
Query: 12 TFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRM 71
F+ L+ + K G + +++ + + G L + L++ K R + ++ +M
Sbjct: 135 VFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKM 194
Query: 72 IKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQL 131
+K G++ ++ +Y +++ S G +A K+ +EM ++G+ PD YN +I +C
Sbjct: 195 VKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMH 254
Query: 132 DHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNAL 191
A S+ + + T+ I ++G +REA +F ++ K + VT+ L
Sbjct: 255 FEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREI-KDDVTANHVTYTTL 313
Query: 192 INGLCKAGKLDEAHLLFYKMEI-GKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTL 250
I+G C+ +DEA L ME G SP + V+ + +CE G+
Sbjct: 314 IDGYCRMNDIDEALRLREVMESRGFSPGV--------------VTYNSILRKLCEDGRIR 359
Query: 251 NAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLI 310
A +LLT+++ + PD T N LIN++CK +M A K+ K + GL D +Y LI
Sbjct: 360 EANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALI 419
Query: 311 DGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPG 370
G +V E+A + M++ P +A Y +WL G Y +
Sbjct: 420 HGFCKVLELENAKEELFSMIEKGFSPGYATY----SWLVDG--------FYNQ------- 460
Query: 371 RDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIF 430
D I L E F K RGL ++A Y L+ C+ ++VD A ++F
Sbjct: 461 NKQDEITKLLEEFEK-------RGLCA--------DVALYRGLIRRICKLEQVDYAKVLF 505
Query: 431 SVLDE 435
+++
Sbjct: 506 ESMEK 510
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 154/353 (43%), Gaps = 49/353 (13%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
++ +NVL++ K G E+A LL +E G + Y++LI + K + EA S+
Sbjct: 202 NIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQ 261
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
RM + G+ P+++ Y + G S EGR+ EA ++F E I+ + + Y +I G+C +
Sbjct: 262 DRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE-IKDDVTANHVTYTTLIDGYCRM 320
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
+D A L + T+ ++ ++C+ G +REA + +M P +T
Sbjct: 321 NDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITC 380
Query: 189 NALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQ 248
N LIN CK + D VS K + M E+G
Sbjct: 381 NTLINAYCK--------------------------------IEDMVSAVKVKKKMIESGL 408
Query: 249 TLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGT 308
L+ Y +Y LI+ FCK + A + + KG SP TY
Sbjct: 409 KLDMY----------------SYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSW 452
Query: 309 LIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLY 361
L+DG Y ++++ K+ + K A+Y+ L+ +C+ +++ A L+
Sbjct: 453 LVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLF 505
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 110/270 (40%), Gaps = 71/270 (26%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
++ T+N ++GF ++G++ EA L R ++ D ++ Y++LIDG+ + +EA L
Sbjct: 272 NIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVT-YTTLIDGYCRMNDIDEALRLR 330
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEM---------------------- 106
M G P V+ Y +LR L +GR+ EA ++ EM
Sbjct: 331 EVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKI 390
Query: 107 -------------IQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEI------SGH--- 144
I+ GL D + Y A+I GFC + +L++A+ + G+
Sbjct: 391 EDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATY 450
Query: 145 ----DGLH----------------------DTCTHTILICEMCKKGMVREAQEMFNQMEK 178
DG + D + LI +CK V A+ +F MEK
Sbjct: 451 SWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEK 510
Query: 179 LGCFPSAVTFNALINGLCKAGKLDEAHLLF 208
G +V F + + GK+ EA LF
Sbjct: 511 KGLVGDSVIFTTMAYAYWRTGKVTEASALF 540
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 79/173 (45%)
Query: 4 RRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNE 63
++ + D T N L+N +CK + AV + + + G + + Y +LI GF K
Sbjct: 371 KKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELEN 430
Query: 64 AHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIK 123
A MI+ G P Y+ ++ G N+ + E K+ E +RGL D Y +I+
Sbjct: 431 AKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIR 490
Query: 124 GFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQM 176
C + Q+D+A+ L + + D+ T + + G V EA +F+ M
Sbjct: 491 RICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVM 543
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 103/227 (45%)
Query: 249 TLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGT 308
T +K+ ++ GVV +I YN+L+++ K+G+ A KL +++ KG+ PD TY T
Sbjct: 184 TDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNT 243
Query: 309 LIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSL 368
LI + +A ++D M + P+ Y + + R ++ A L+ E +
Sbjct: 244 LISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDV 303
Query: 369 PGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALI 428
++ Y +++ A+R ++ R + Y+ +L C+ ++ EA
Sbjct: 304 TANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANR 363
Query: 429 IFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFEL 475
+ + + I + +C LI+ C ++ AV + ++ G +L
Sbjct: 364 LLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKL 410
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 56/121 (46%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
F AT++ L++GF Q K +E LL E+ G ++ Y LI K + + A
Sbjct: 443 FSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAK 502
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
L+ M K G++ D +++ M G+V EA +F M R L+ + Y +I +
Sbjct: 503 VLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSISASY 562
Query: 126 C 126
Sbjct: 563 A 563
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 171/381 (44%), Gaps = 36/381 (9%)
Query: 10 LATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSG-------------------YSS 50
L T ++L+ K K + A S+LR + +G G+ L + S
Sbjct: 115 LETHAIVLHTLTKNRKFKSAESILRDVLVNG-GVDLPAKVFDALLYSYRECDSTPRVFDS 173
Query: 51 LIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRG 110
L F +++ A + +M G LP V + L +GRV A++ + EM +
Sbjct: 174 LFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCK 233
Query: 111 LLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQ 170
+ P+ + N ++ G+C G+LD L ++ ++ LI C+KG++ A
Sbjct: 234 ISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSAL 293
Query: 171 EMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKME-IGKSPSLFFRLAQGSDH 229
++ N M K G P+ VTFN LI+G C+A KL EA +F +M+ + +P
Sbjct: 294 KLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAP------------ 341
Query: 230 VSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFK 289
++V+ + + G A++ + +G+ DI TYN LI CK A +
Sbjct: 342 --NTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQ 399
Query: 290 LFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLC 349
K+L + L P+S T+ LI G + + F++ M++ C P+ + L++ C
Sbjct: 400 FVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFC 459
Query: 350 RGKKISLAFSLYLEYL-KSLP 369
R + A + E + +S+P
Sbjct: 460 RNEDFDGASQVLREMVRRSIP 480
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 137/302 (45%), Gaps = 48/302 (15%)
Query: 12 TFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRM 71
T N++++G+C+ GKL++ + LL+ +ER G Y++LI G + + A L M
Sbjct: 240 TLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMM 299
Query: 72 IKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQL 131
K G+ P+V+ + ++ G ++ EA K+F EM + P+ YN +I G+ G
Sbjct: 300 GKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDH 359
Query: 132 DHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNAL 191
+ A + ++ + D T+ LI +CK+ R+A + +++K P++ TF+AL
Sbjct: 360 EMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSAL 419
Query: 192 INGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLN 251
I G C D
Sbjct: 420 IMGQCVRKNADRG----------------------------------------------- 432
Query: 252 AYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLID 311
++L + SG P+ +T+N+L+++FC+ + +GA ++ +++ + + DS T + +
Sbjct: 433 -FELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCN 491
Query: 312 GL 313
GL
Sbjct: 492 GL 493
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 100/206 (48%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
F+ ++N L+ G C++G L A+ L ++ + G + +++LI GF +A + EA
Sbjct: 269 FRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEAS 328
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
++G M + P+ + Y ++ G S +G A + + +M+ G+ D YNA+I G
Sbjct: 329 KVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGL 388
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
C + A E+ + + ++ T + LI C + E++ M + GC P+
Sbjct: 389 CKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNE 448
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKM 211
TFN L++ C+ D A + +M
Sbjct: 449 QTFNMLVSAFCRNEDFDGASQVLREM 474
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 167/374 (44%), Gaps = 24/374 (6%)
Query: 86 MLRGLSNEGRVGEAVKMFAEMIQ--RGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISG 143
+LR + G V K+F ++ R ++++ K F + + +A +++
Sbjct: 137 ILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKD 196
Query: 144 HDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDE 203
+ L + + + +G V A + +M + P+ T N +++G C++GKLD+
Sbjct: 197 YGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDK 256
Query: 204 AHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSG 263
L ME L FR + VS + CE G +A KL + SG
Sbjct: 257 GIELLQDME-----RLGFR--------ATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSG 303
Query: 264 VVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAF 323
+ P++ T+N LI+ FC+A + A K+F +++ ++P++VTY TLI+G + E AF
Sbjct: 304 LQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAF 363
Query: 324 KIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYF 383
+ + M+ + + Y AL+ LC+ K A E K ++ + +AL
Sbjct: 364 RFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSAL---- 419
Query: 384 MKGEVER--AIRGLLELDFRFRD---FNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNI 438
+ G+ R A RG R N +++L+ FC+ + D A + + +I
Sbjct: 420 IMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSI 479
Query: 439 NINPTSCVHLISGL 452
++ + + +GL
Sbjct: 480 PLDSRTVHQVCNGL 493
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 121/310 (39%), Gaps = 60/310 (19%)
Query: 167 REAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGK-SPSLFFRLAQ 225
R A + F QM+ G P+ + NA ++ L G++D A + +M K SP+ +
Sbjct: 185 RNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPY----- 239
Query: 226 GSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMN 285
+L + C +G+ +LL + G +YN LI C+ G ++
Sbjct: 240 ---------TLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 286 GAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALM 345
A KL + GL P+ VT+ TLI G R + ++A K+ M P+ Y L+
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 346 TWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDF 405
+ +AF Y + + + RD
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRD--------------------------------- 377
Query: 406 NLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIF 465
+ Y+ L+ G C+ K +A LD+ N+ N ++ LI G C ++N
Sbjct: 378 -ILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKN-------- 428
Query: 466 LYSLDKGFEL 475
D+GFEL
Sbjct: 429 ---ADRGFEL 435
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 95/206 (46%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
Q ++ TFN L++GFC+ KL+EA + ++ Y++LI+G+ + + A
Sbjct: 305 QPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFR 364
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
Y M+ GI D++ Y ++ GL + + +A + E+ + L+P++ ++A+I G C
Sbjct: 365 FYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQC 424
Query: 127 DIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAV 186
D L+ + + T +L+ C+ A ++ +M + +
Sbjct: 425 VRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSR 484
Query: 187 TFNALINGLCKAGKLDEAHLLFYKME 212
T + + NGL GK L +ME
Sbjct: 485 TVHQVCNGLKHQGKDQLVKKLLQEME 510
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 67/144 (46%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
QRD+ T+N L+ G CKQ K +A ++ L+++ S +S+LI G + +
Sbjct: 375 QRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFE 434
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
LY MI+ G P+ + +++ A ++ EM++R + D+ + + G
Sbjct: 435 LYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLK 494
Query: 127 DIGQLDHARSLHVEISGHDGLHDT 150
G+ + L E+ G L ++
Sbjct: 495 HQGKDQLVKKLLQEMEGKKFLQES 518
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 171/381 (44%), Gaps = 36/381 (9%)
Query: 10 LATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSG-------------------YSS 50
L T ++L+ K K + A S+LR + +G G+ L + S
Sbjct: 115 LETHAIVLHTLTKNRKFKSAESILRDVLVNG-GVDLPAKVFDALLYSYRECDSTPRVFDS 173
Query: 51 LIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRG 110
L F +++ A + +M G LP V + L +GRV A++ + EM +
Sbjct: 174 LFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCK 233
Query: 111 LLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQ 170
+ P+ + N ++ G+C G+LD L ++ ++ LI C+KG++ A
Sbjct: 234 ISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSAL 293
Query: 171 EMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKME-IGKSPSLFFRLAQGSDH 229
++ N M K G P+ VTFN LI+G C+A KL EA +F +M+ + +P
Sbjct: 294 KLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAP------------ 341
Query: 230 VSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFK 289
++V+ + + G A++ + +G+ DI TYN LI CK A +
Sbjct: 342 --NTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQ 399
Query: 290 LFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLC 349
K+L + L P+S T+ LI G + + F++ M++ C P+ + L++ C
Sbjct: 400 FVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFC 459
Query: 350 RGKKISLAFSLYLEYL-KSLP 369
R + A + E + +S+P
Sbjct: 460 RNEDFDGASQVLREMVRRSIP 480
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 137/302 (45%), Gaps = 48/302 (15%)
Query: 12 TFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRM 71
T N++++G+C+ GKL++ + LL+ +ER G Y++LI G + + A L M
Sbjct: 240 TLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMM 299
Query: 72 IKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQL 131
K G+ P+V+ + ++ G ++ EA K+F EM + P+ YN +I G+ G
Sbjct: 300 GKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDH 359
Query: 132 DHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNAL 191
+ A + ++ + D T+ LI +CK+ R+A + +++K P++ TF+AL
Sbjct: 360 EMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSAL 419
Query: 192 INGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLN 251
I G C D
Sbjct: 420 IMGQCVRKNADRG----------------------------------------------- 432
Query: 252 AYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLID 311
++L + SG P+ +T+N+L+++FC+ + +GA ++ +++ + + DS T + +
Sbjct: 433 -FELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCN 491
Query: 312 GL 313
GL
Sbjct: 492 GL 493
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 100/206 (48%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
F+ ++N L+ G C++G L A+ L ++ + G + +++LI GF +A + EA
Sbjct: 269 FRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEAS 328
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
++G M + P+ + Y ++ G S +G A + + +M+ G+ D YNA+I G
Sbjct: 329 KVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGL 388
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
C + A E+ + + ++ T + LI C + E++ M + GC P+
Sbjct: 389 CKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNE 448
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKM 211
TFN L++ C+ D A + +M
Sbjct: 449 QTFNMLVSAFCRNEDFDGASQVLREM 474
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 167/374 (44%), Gaps = 24/374 (6%)
Query: 86 MLRGLSNEGRVGEAVKMFAEMIQ--RGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISG 143
+LR + G V K+F ++ R ++++ K F + + +A +++
Sbjct: 137 ILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKD 196
Query: 144 HDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDE 203
+ L + + + +G V A + +M + P+ T N +++G C++GKLD+
Sbjct: 197 YGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDK 256
Query: 204 AHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSG 263
L ME L FR + VS + CE G +A KL + SG
Sbjct: 257 GIELLQDME-----RLGFR--------ATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSG 303
Query: 264 VVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAF 323
+ P++ T+N LI+ FC+A + A K+F +++ ++P++VTY TLI+G + E AF
Sbjct: 304 LQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAF 363
Query: 324 KIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYF 383
+ + M+ + + Y AL+ LC+ K A E K ++ + +AL
Sbjct: 364 RFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSAL---- 419
Query: 384 MKGEVER--AIRGLLELDFRFRD---FNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNI 438
+ G+ R A RG R N +++L+ FC+ + D A + + +I
Sbjct: 420 IMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSI 479
Query: 439 NINPTSCVHLISGL 452
++ + + +GL
Sbjct: 480 PLDSRTVHQVCNGL 493
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 121/310 (39%), Gaps = 60/310 (19%)
Query: 167 REAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGK-SPSLFFRLAQ 225
R A + F QM+ G P+ + NA ++ L G++D A + +M K SP+ +
Sbjct: 185 RNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPY----- 239
Query: 226 GSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMN 285
+L + C +G+ +LL + G +YN LI C+ G ++
Sbjct: 240 ---------TLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 286 GAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALM 345
A KL + GL P+ VT+ TLI G R + ++A K+ M P+ Y L+
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 346 TWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDF 405
+ +AF Y + + + RD
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRD--------------------------------- 377
Query: 406 NLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIF 465
+ Y+ L+ G C+ K +A LD+ N+ N ++ LI G C ++N
Sbjct: 378 -ILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKN-------- 428
Query: 466 LYSLDKGFEL 475
D+GFEL
Sbjct: 429 ---ADRGFEL 435
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 95/206 (46%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
Q ++ TFN L++GFC+ KL+EA + ++ Y++LI+G+ + + A
Sbjct: 305 QPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFR 364
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
Y M+ GI D++ Y ++ GL + + +A + E+ + L+P++ ++A+I G C
Sbjct: 365 FYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQC 424
Query: 127 DIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAV 186
D L+ + + T +L+ C+ A ++ +M + +
Sbjct: 425 VRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSR 484
Query: 187 TFNALINGLCKAGKLDEAHLLFYKME 212
T + + NGL GK L +ME
Sbjct: 485 TVHQVCNGLKHQGKDQLVKKLLQEME 510
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 67/144 (46%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
QRD+ T+N L+ G CKQ K +A ++ L+++ S +S+LI G + +
Sbjct: 375 QRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFE 434
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
LY MI+ G P+ + +++ A ++ EM++R + D+ + + G
Sbjct: 435 LYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLK 494
Query: 127 DIGQLDHARSLHVEISGHDGLHDT 150
G+ + L E+ G L ++
Sbjct: 495 HQGKDQLVKKLLQEMEGKKFLQES 518
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 185/403 (45%), Gaps = 23/403 (5%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
+ + T+N L+ G C G L +++ + L + G YS L++ +K R +EA
Sbjct: 172 YPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAV 231
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
L +I G P+++ Y ++L G EGR +A+ +F E+ +G + YN +++
Sbjct: 232 KLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCL 291
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFP-- 183
C G+ + A SL E+ G D T+ ILI + G +A ++ +M K G
Sbjct: 292 CCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSK-GNHQFR 350
Query: 184 -SAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEH 242
+A ++N +I LCK GK+D + + + +R + ++ +++
Sbjct: 351 VTATSYNPVIARLCKEGKVD--------LVVKCLDEMIYRRCKPNEGTYNAIG------S 396
Query: 243 MCEAGQTLN-AYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSP 301
+CE + A+ ++ L++ Y +I S C+ GN AF+L ++ G P
Sbjct: 397 LCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDP 456
Query: 302 DSVTYGTLIDGLYRVEREEDAFKIRDHMLK-HVCEPSFAVYKALMTWLCRGKKISLAFSL 360
D+ TY LI GL A ++ M + C+P+ + A++ LC+ ++ LA +
Sbjct: 457 DAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEV 516
Query: 361 Y--LEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFR 401
+ + K +P +I +E + E+E A L EL R
Sbjct: 517 FEMMVEKKRMPNETTYAI-LVEGIAHEDELELAKEVLDELRLR 558
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 115/460 (25%), Positives = 203/460 (44%), Gaps = 31/460 (6%)
Query: 23 QGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVIL 82
+ L ++ S L L G ++ + L+ KA R +A + M+ GI+PD
Sbjct: 84 EPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASA 143
Query: 83 YAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEIS 142
Y ++ L G VG A+++ +M G + YNA+++G C +G L+ + VE
Sbjct: 144 YTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQF-VERL 202
Query: 143 GHDGLHDTC-THTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKL 201
GL T++ L+ K+ EA ++ +++ G P+ V++N L+ G CK G+
Sbjct: 203 MQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRT 262
Query: 202 DEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLAD 261
D+A LF ++ P+ F+ ++ VS + +C G+ A LL ++
Sbjct: 263 DDAMALFREL-----PAKGFK--------ANVVSYNILLRCLCCDGRWEEANSLLAEMDG 309
Query: 262 SGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKG---LSPDSVTYGTLIDGLYRVER 318
P + TYNILINS G A ++ K++ KG + +Y +I L + +
Sbjct: 310 GDRAPSVVTYNILINSLAFHGRTEQALQVLKEMS-KGNHQFRVTATSYNPVIARLCKEGK 368
Query: 319 EEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSI-- 376
+ K D M+ C+P+ Y A+ + K+ AF + ++SL +
Sbjct: 369 VDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYI----IQSLSNKQKCCTHD 424
Query: 377 ---NALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVL 433
+ + KG A + L E+ D + YS L+ G C A+ + S++
Sbjct: 425 FYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIM 484
Query: 434 DEFNININPT--SCVHLISGLCAKRNLYDAVVIFLYSLDK 471
+E N PT + +I GLC R A+ +F ++K
Sbjct: 485 EESE-NCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEK 523
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 104/460 (22%), Positives = 203/460 (44%), Gaps = 29/460 (6%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
++A LL CK +L++A+ ++ L+ G S Y+ L++ K A L
Sbjct: 105 NVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLV 164
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
+M G + + Y ++RGL G + ++++ ++Q+GL P+A Y+ +++
Sbjct: 165 EKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKE 224
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
D A L EI G + ++ +L+ CK+G +A +F ++ G + V++
Sbjct: 225 RGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSY 284
Query: 189 NALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQ 248
N L+ LC G+ +EA+ L +M+ G D V+ + + G+
Sbjct: 285 NILLRCLCCDGRWEEANSLLAEMD-------------GGDRAPSVVTYNILINSLAFHGR 331
Query: 249 TLNAYKLLTQLA--DSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTY 306
T A ++L +++ + +YN +I CK G ++ K ++ + P+ TY
Sbjct: 332 TEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTY 391
Query: 307 GTLIDGLYRVEREEDAFKIRDHML--KHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEY 364
+ + ++AF I + + C F YK+++T LCR AF L E
Sbjct: 392 NAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDF--YKSVITSLCRKGNTFAAFQLLYEM 449
Query: 365 LKSLPGRDNDSINALEEYFMKGE-VERAIRGLLE-LDFRFRDFNLAP----YSILLIGFC 418
+ D + +AL ++G +E G +E L N P ++ +++G C
Sbjct: 450 TRCGFDPDAHTYSAL----IRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLC 505
Query: 419 QAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNL 458
+ ++ D A+ +F ++ E N T+ L+ G+ + L
Sbjct: 506 KIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDEL 545
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 100/248 (40%), Gaps = 46/248 (18%)
Query: 10 LATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSG--YSSLIDGFFKARRYNEAHSL 67
+ T+N+L+N G+ E+A+ +L+ + + R++ Y+ +I K + +
Sbjct: 316 VVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKC 375
Query: 68 YGRMIKGGILPDVILY-AI---------------MLRGLSNE------------------ 93
MI P+ Y AI +++ LSN+
Sbjct: 376 LDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCR 435
Query: 94 -GRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCT 152
G A ++ EM + G PDAH Y+A+I+G C G A +E+ + C
Sbjct: 436 KGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGA----MEVLSIMEESENCK 491
Query: 153 HTI-----LICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLL 207
T+ +I +CK A E+F M + P+ T+ L+ G+ +L+ A +
Sbjct: 492 PTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEV 551
Query: 208 FYKMEIGK 215
++ + K
Sbjct: 552 LDELRLRK 559
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 151/323 (46%), Gaps = 27/323 (8%)
Query: 13 FNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMI 72
+ LL + K GK+E+A+ L ++R G + Y+ LI G KA R +EA+ Y M+
Sbjct: 271 YTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDML 330
Query: 73 KGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKG-FCDIGQL 131
+ G+ PDV+ ++ L GRV E +F+EM P YN +IK F +
Sbjct: 331 RDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHV 390
Query: 132 DHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNAL 191
S ++ T++ILI CK V +A + +M++ G P + +L
Sbjct: 391 SEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSL 450
Query: 192 INGLCKAGKLDEAHLLFYKM-----------------------EIGKSPSLFFRLA-QGS 227
IN L KA + + A+ LF ++ ++ ++ LF + QGS
Sbjct: 451 INALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGS 510
Query: 228 DHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGA 287
D + + M +AG A LL ++ ++G DI ++NI++N F + G A
Sbjct: 511 G--PDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRA 568
Query: 288 FKLFKDLQLKGLSPDSVTYGTLI 310
++F+ ++ G+ PD VTY TL+
Sbjct: 569 IEMFETIKHSGIKPDGVTYNTLL 591
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 151/314 (48%), Gaps = 14/314 (4%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRY-NEAHSL 67
D+ N L+N K G++EE ++ + + Y+++I F+++ + +E S
Sbjct: 337 DVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSW 396
Query: 68 YGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCD 127
+ +M + P Y+I++ G RV +A+ + EM ++G P Y ++I
Sbjct: 397 FDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGK 456
Query: 128 IGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVT 187
+ + A L E+ + G + + ++I K G + EA ++FN+M+ G P
Sbjct: 457 AKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYA 516
Query: 188 FNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAG 247
+NAL++G+ KAG ++EA+ L KME +D S ++ L G
Sbjct: 517 YNALMSGMVKAGMINEANSLLRKMEEN---------GCRADINSHNIILN----GFARTG 563
Query: 248 QTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYG 307
A ++ + SG+ PD TYN L+ F AG A ++ ++++ KG D++TY
Sbjct: 564 VPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYS 623
Query: 308 TLIDGLYRVEREED 321
+++D + V+ E+D
Sbjct: 624 SILDAVGNVDHEKD 637
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 109/436 (25%), Positives = 196/436 (44%), Gaps = 24/436 (5%)
Query: 46 SGYSSLIDGFFKARRYNEAHSLYGRMI-KGGILPDVILYAIMLRGLSNEGRVGEAVKMFA 104
S Y+S+I + ++ + H +Y M +G PD I Y+ ++ GR A+++F
Sbjct: 198 STYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFD 257
Query: 105 EMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKG 164
EM + P Y ++ + +G+++ A L E+ T+T LI + K G
Sbjct: 258 EMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAG 317
Query: 165 MVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGK-SPSLFFRL 223
V EA + M + G P V N L+N L K G+++E +F +M + + +P++
Sbjct: 318 RVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTV---- 373
Query: 224 AQGSDHVSDSVSLQKKVE---HMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCK 280
VS + ++ E H+ E + K ADS V P TY+ILI+ +CK
Sbjct: 374 ------VSYNTVIKALFESKAHVSEVSSWFDKMK-----ADS-VSPSEFTYSILIDGYCK 421
Query: 281 AGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAV 340
+ A L +++ KG P Y +LI+ L + +R E A ++ + ++ S V
Sbjct: 422 TNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRV 481
Query: 341 YKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMK-GEVERAIRGLLELD 399
Y ++ + K+S A L+ E G D + NAL +K G + A L +++
Sbjct: 482 YAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKME 541
Query: 400 FRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLY 459
++ ++I+L GF + A+ +F + I + + L+ G A ++
Sbjct: 542 ENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLL-GCFAHAGMF 600
Query: 460 DAVVIFLYSL-DKGFE 474
+ + + DKGFE
Sbjct: 601 EEAARMMREMKDKGFE 616
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 162/375 (43%), Gaps = 29/375 (7%)
Query: 156 LICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGK 215
L+ + + MV +A +F Q + C P++ T+N++I L + G+ ++ H ++ +M
Sbjct: 168 LVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEM---- 223
Query: 216 SPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILI 275
D D+++ + + G+ +A +L ++ D+ + P K Y L+
Sbjct: 224 --------CNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLL 275
Query: 276 NSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCE 335
+ K G + A LF++++ G SP TY LI GL + R ++A+ ML+
Sbjct: 276 GIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLT 335
Query: 336 PSFAVYKALMTWLCRGKKISLAFSLYLE--YLKSLPG--RDNDSINALEEYFMKGEVERA 391
P LM L + ++ +++ E + P N I AL E K V
Sbjct: 336 PDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFE--SKAHVSEV 393
Query: 392 IRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISG 451
++ + YSIL+ G+C+ +V++AL++ +DE P + LI+
Sbjct: 394 SSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINA 453
Query: 452 LCAKRNLYDAVVIFLYSLDKGF-----ELGPKICKELLECLLVSQDKRKYAIDLIGRMKS 506
L K Y+A L + F + + K +C +S+ A+DL MK+
Sbjct: 454 L-GKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSE-----AVDLFNEMKN 507
Query: 507 RGYRLHKYQYRQTIS 521
+G Y Y +S
Sbjct: 508 QGSGPDVYAYNALMS 522
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 150/326 (46%), Gaps = 18/326 (5%)
Query: 11 ATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGR 70
T+N L++G+C+ GKLE A ++ ++ D + ++++ G + N A +
Sbjct: 407 VTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMD 466
Query: 71 MIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQ 130
M K G+ +V+ Y ++ + V +A+ + +M++ G PDA Y A+I G C + +
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRR 526
Query: 131 LDHARSLHVEISGHDGLH-DTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFN 189
DH VE G D + +LI C K + EM MEK G P ++T+N
Sbjct: 527 -DHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYN 585
Query: 190 ALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQ 248
LI+ K + + +M E G P++ + ++ C G+
Sbjct: 586 TLISFFGKHKDFESVERMMEQMREDGLDPTV--------------TTYGAVIDAYCSVGE 631
Query: 249 TLNAYKLLTQLA-DSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYG 307
A KL + S V P+ YNILIN+F K GN A L +++++K + P+ TY
Sbjct: 632 LDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYN 691
Query: 308 TLIDGLYRVEREEDAFKIRDHMLKHV 333
L L + E K+ D M++H+
Sbjct: 692 ALFKCLNEKTQGETLLKLMDEMVEHL 717
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 169/370 (45%), Gaps = 30/370 (8%)
Query: 5 RFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLE----RDGRGIRLSG--YSSLIDGFFKA 58
+ + D+ T +L+N CK +++EA+ + + DG I+ +++LIDG K
Sbjct: 324 KIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKV 383
Query: 59 RRYNEAHSLYGRM-IKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHC 117
R EA L RM ++ +P+ + Y ++ G G++ A ++ + M + + P+
Sbjct: 384 GRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVT 443
Query: 118 YNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQME 177
N I+ G C L+ A +++ + T+ LI C V +A + +M
Sbjct: 444 VNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKML 503
Query: 178 KLGCFPSAVTFNALINGLCKAGKLDEA--------------HLLFYKMEIG------KSP 217
+ GC P A + ALI+GLC+ + +A LL Y M IG +
Sbjct: 504 EAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAE 563
Query: 218 SLFFRLA--QGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILI 275
++ L + DS++ + + + +++ Q+ + G+ P + TY +I
Sbjct: 564 KVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVI 623
Query: 276 NSFCKAGNMNGAFKLFKDLQLKG-LSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVC 334
+++C G ++ A KLFKD+ L ++P++V Y LI+ ++ A +++ M +
Sbjct: 624 DAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMV 683
Query: 335 EPSFAVYKAL 344
P+ Y AL
Sbjct: 684 RPNVETYNAL 693
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 185/429 (43%), Gaps = 61/429 (14%)
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
+L R G+ P+ + + L R A + +++++ +A +NA++
Sbjct: 245 ALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCL 304
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGC---- 181
+ L +++ D T ILI +CK V EA E+F QM
Sbjct: 305 GRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGN 364
Query: 182 --FPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKK 239
++ FN LI+GLCK G+L EA L +M++ + V ++V+
Sbjct: 365 VIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEER------------CVPNAVTYNCL 412
Query: 240 VEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGL 299
++ C AG+ A ++++++ + + P++ T N ++ C+ +N A F D++ +G+
Sbjct: 413 IDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGV 472
Query: 300 SPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLA-- 357
+ VTY TLI V E A + ML+ C P +Y AL++ LC+ ++ A
Sbjct: 473 KGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIR 532
Query: 358 ---------FSLYL--------------------EYLKSL--PGRDNDSI--NALEEYFM 384
FSL L E L + G+ DSI N L +F
Sbjct: 533 VVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFG 592
Query: 385 KGEVERAIRGLLELDFRFRDFNLAP----YSILLIGFCQAKKVDEALIIFSVLDEFNINI 440
K + ++ ++E + R+ L P Y ++ +C ++DEAL +F + + +
Sbjct: 593 KHKDFESVERMME---QMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMG-LHSKV 648
Query: 441 NPTSCVHLI 449
NP + ++ I
Sbjct: 649 NPNTVIYNI 657
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/477 (19%), Positives = 205/477 (42%), Gaps = 42/477 (8%)
Query: 80 VILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHV 139
++ +++R G V ++V ++ + + ++ N ++ G +D A +
Sbjct: 152 IVATKLLIRWFGRMGMVNQSVLVYERLDSN--MKNSQVRNVVVDVLLRNGLVDDAFKVLD 209
Query: 140 EISGHDGL--HDTCTHTILICEMCKKGMVREAQ--EMFNQMEKLGCFPSAVTFNALINGL 195
E+ + + + T I++ E+ K+ ++ E + + ++ G P++V I+ L
Sbjct: 210 EMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSL 269
Query: 196 CKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKL 255
CK + + A + + K+P A + + + + M + L
Sbjct: 270 CKNARANTAWDILSDLMKNKTP----LEAPPFNALLSCLGRNMDISRMND---------L 316
Query: 256 LTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKG--------LSPDSVTYG 307
+ ++ + + PD+ T ILIN+ CK+ ++ A ++F+ Q++G + DS+ +
Sbjct: 317 VLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFE--QMRGKRTDDGNVIKADSIHFN 374
Query: 308 TLIDGLYRVEREEDAFKIRDHM-LKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLK 366
TLIDGL +V R ++A ++ M L+ C P+ Y L+ CR K+ A + +
Sbjct: 375 TLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETA-----KEVV 429
Query: 367 SLPGRDNDSINALEEYFMKGEVER------AIRGLLELDFRFRDFNLAPYSILLIGFCQA 420
S D N + + G + R A+ ++++ N+ Y L+ C
Sbjct: 430 SRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSV 489
Query: 421 KKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKIC 480
V++A+ + + E + + LISGLC R +DA+ + + GF L +
Sbjct: 490 SNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLD-LLA 548
Query: 481 KELLECLLVSQDKRKYAIDLIGRMKSRGYRLHKYQYRQTISLLQQLQEGKAVKLFSE 537
+L L ++ + +++ M+ G + Y IS + ++ ++V+ E
Sbjct: 549 YNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMME 605
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 169/363 (46%), Gaps = 33/363 (9%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEA---- 64
D+ F V ++ CK G L+EA S+L L+ G SS+IDGF K + EA
Sbjct: 305 DIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLI 364
Query: 65 HSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKG 124
HS R P++ +Y+ L + + G + A +F E+ + GLLPD CY +I G
Sbjct: 365 HSFRLR-------PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDG 417
Query: 125 FCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPS 184
+C++G+ D A + T TILI + G + +A+ +F M+ G
Sbjct: 418 YCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLD 477
Query: 185 AVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSP----------SLFFR--LAQGSDHVS 231
VT+N L++G K +L++ L +M G SP S+ R + + ++ +S
Sbjct: 478 VVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIIS 537
Query: 232 D---------SVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAG 282
+ +++ + + G A+ L +AD + PD+ T + L++ +CKA
Sbjct: 538 ELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQ 597
Query: 283 NMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYK 342
M A LF L GL PD V Y TLI G V E A ++ M++ P+ + +
Sbjct: 598 RMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHH 657
Query: 343 ALM 345
AL+
Sbjct: 658 ALV 660
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 108/472 (22%), Positives = 200/472 (42%), Gaps = 18/472 (3%)
Query: 38 RDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVG 97
R R + + +S LID + R+ N A L ++ + GI P + +L+ + +
Sbjct: 194 RIDRRVLETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLE 253
Query: 98 EAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILI 157
A + M+ RG +A + I+ +C G D L + + + D T+ I
Sbjct: 254 LAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFI 313
Query: 158 CEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSP 217
++CK G ++EA + +++ G +V+ +++I+G CK GK +EA L + + P
Sbjct: 314 DKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRL--RP 371
Query: 218 SLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINS 277
++F + ++C G L A + ++ + G++PD Y +I+
Sbjct: 372 NIFV--------------YSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDG 417
Query: 278 FCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPS 337
+C G + AF+ F L G P T LI R DA + +M +
Sbjct: 418 YCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLD 477
Query: 338 FAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINAL-EEYFMKGEVERAIRGLL 396
Y LM + +++ F L E + D + N L ++G ++ A +
Sbjct: 478 VVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIIS 537
Query: 397 ELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKR 456
EL R + ++ ++ GF + EA I++ + + + + +C L+ G C +
Sbjct: 538 ELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQ 597
Query: 457 NLYDAVVIFLYSLDKGFELGPKICKELLECLLVSQDKRKYAIDLIGRMKSRG 508
+ A+V+F LD G + + L+ D K A +LIG M RG
Sbjct: 598 RMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEK-ACELIGLMVQRG 648
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 172/399 (43%), Gaps = 26/399 (6%)
Query: 16 LLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKGG 75
LL + LE A + + GR + + S I + +++ L M G
Sbjct: 242 LLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYG 301
Query: 76 ILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHAR 135
I PD++ + + + L G + EA + ++ G+ D+ +++I GFC +G+ + A
Sbjct: 302 IRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAI 361
Query: 136 SLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGL 195
L I + ++ + +C G + A +F ++ +LG P V + +I+G
Sbjct: 362 KL---IHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGY 418
Query: 196 CKAGKLDEAHLLFYK-MEIGKSPSLFF---------RLAQGSDHVS------------DS 233
C G+ D+A F ++ G PSL R SD S D
Sbjct: 419 CNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDV 478
Query: 234 VSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKD 293
V+ + + Q ++L+ ++ +G+ PD+ TYNILI+S G ++ A ++ +
Sbjct: 479 VTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISE 538
Query: 294 LQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKK 353
L +G P ++ + +I G + ++AF + +M +P AL+ C+ ++
Sbjct: 539 LIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQR 598
Query: 354 ISLAFSLYLEYLKSLPGRDNDSINAL-EEYFMKGEVERA 391
+ A L+ + L + D N L Y G++E+A
Sbjct: 599 MEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKA 637
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 66/121 (54%)
Query: 4 RRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNE 63
R F F ++ GF K+G +EA L + + S+L+ G+ KA+R +
Sbjct: 542 RGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEK 601
Query: 64 AHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIK 123
A L+ +++ G+ PDV+LY ++ G + G + +A ++ M+QRG+LP+ ++A++
Sbjct: 602 AIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVL 661
Query: 124 G 124
G
Sbjct: 662 G 662
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 169/363 (46%), Gaps = 33/363 (9%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEA---- 64
D+ F V ++ CK G L+EA S+L L+ G SS+IDGF K + EA
Sbjct: 305 DIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLI 364
Query: 65 HSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKG 124
HS R P++ +Y+ L + + G + A +F E+ + GLLPD CY +I G
Sbjct: 365 HSFRLR-------PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDG 417
Query: 125 FCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPS 184
+C++G+ D A + T TILI + G + +A+ +F M+ G
Sbjct: 418 YCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLD 477
Query: 185 AVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSP----------SLFFR--LAQGSDHVS 231
VT+N L++G K +L++ L +M G SP S+ R + + ++ +S
Sbjct: 478 VVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIIS 537
Query: 232 D---------SVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAG 282
+ +++ + + G A+ L +AD + PD+ T + L++ +CKA
Sbjct: 538 ELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQ 597
Query: 283 NMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYK 342
M A LF L GL PD V Y TLI G V E A ++ M++ P+ + +
Sbjct: 598 RMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHH 657
Query: 343 ALM 345
AL+
Sbjct: 658 ALV 660
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 108/472 (22%), Positives = 200/472 (42%), Gaps = 18/472 (3%)
Query: 38 RDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVG 97
R R + + +S LID + R+ N A L ++ + GI P + +L+ + +
Sbjct: 194 RIDRRVLETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLE 253
Query: 98 EAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILI 157
A + M+ RG +A + I+ +C G D L + + + D T+ I
Sbjct: 254 LAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFI 313
Query: 158 CEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSP 217
++CK G ++EA + +++ G +V+ +++I+G CK GK +EA L + + P
Sbjct: 314 DKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRL--RP 371
Query: 218 SLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINS 277
++F + ++C G L A + ++ + G++PD Y +I+
Sbjct: 372 NIFV--------------YSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDG 417
Query: 278 FCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPS 337
+C G + AF+ F L G P T LI R DA + +M +
Sbjct: 418 YCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLD 477
Query: 338 FAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINAL-EEYFMKGEVERAIRGLL 396
Y LM + +++ F L E + D + N L ++G ++ A +
Sbjct: 478 VVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIIS 537
Query: 397 ELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKR 456
EL R + ++ ++ GF + EA I++ + + + + +C L+ G C +
Sbjct: 538 ELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQ 597
Query: 457 NLYDAVVIFLYSLDKGFELGPKICKELLECLLVSQDKRKYAIDLIGRMKSRG 508
+ A+V+F LD G + + L+ D K A +LIG M RG
Sbjct: 598 RMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEK-ACELIGLMVQRG 648
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 172/399 (43%), Gaps = 26/399 (6%)
Query: 16 LLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKGG 75
LL + LE A + + GR + + S I + +++ L M G
Sbjct: 242 LLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYG 301
Query: 76 ILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHAR 135
I PD++ + + + L G + EA + ++ G+ D+ +++I GFC +G+ + A
Sbjct: 302 IRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAI 361
Query: 136 SLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGL 195
L I + ++ + +C G + A +F ++ +LG P V + +I+G
Sbjct: 362 KL---IHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGY 418
Query: 196 CKAGKLDEAHLLFYK-MEIGKSPSLFF---------RLAQGSDHVS------------DS 233
C G+ D+A F ++ G PSL R SD S D
Sbjct: 419 CNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDV 478
Query: 234 VSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKD 293
V+ + + Q ++L+ ++ +G+ PD+ TYNILI+S G ++ A ++ +
Sbjct: 479 VTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISE 538
Query: 294 LQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKK 353
L +G P ++ + +I G + ++AF + +M +P AL+ C+ ++
Sbjct: 539 LIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQR 598
Query: 354 ISLAFSLYLEYLKSLPGRDNDSINAL-EEYFMKGEVERA 391
+ A L+ + L + D N L Y G++E+A
Sbjct: 599 MEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKA 637
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 66/121 (54%)
Query: 4 RRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNE 63
R F F ++ GF K+G +EA L + + S+L+ G+ KA+R +
Sbjct: 542 RGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEK 601
Query: 64 AHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIK 123
A L+ +++ G+ PDV+LY ++ G + G + +A ++ M+QRG+LP+ ++A++
Sbjct: 602 AIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVL 661
Query: 124 G 124
G
Sbjct: 662 G 662
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 150/310 (48%), Gaps = 27/310 (8%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
F+ D F LL+ CK G +++A L + R + L ++SL+ G+ + + EA
Sbjct: 214 FEPDEYVFGCLLDALCKHGSVKDAAKLFEDM-RMRFPVNLRYFTSLLYGWCRVGKMMEAK 272
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
+ +M + G PD++ Y +L G +N G++ +A + +M +RG P+A+CY +I+
Sbjct: 273 YVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQAL 332
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
C + +++ A + VE+ ++ D T+T L+ CK G + + + + M K G PS
Sbjct: 333 CKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSE 392
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKM-EIGKSP-----SLFFRLAQGSDHVSDSVSLQKK 239
+T+ ++ K +E L KM +I P ++ RLA
Sbjct: 393 LTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLA--------------- 437
Query: 240 VEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGL 299
C+ G+ A +L ++ ++G+ P + T+ I+IN G + A FK++ +GL
Sbjct: 438 ----CKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGL 493
Query: 300 SPDSVTYGTL 309
S YGTL
Sbjct: 494 FSVS-QYGTL 502
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 168/362 (46%), Gaps = 26/362 (7%)
Query: 154 TILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEI 213
+L+ MV++A E+ ++M K G P F L++ LCK G + +A LF M +
Sbjct: 187 VVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRM 246
Query: 214 GKSPSL--FFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTY 271
+L F L G C G+ + A +L Q+ ++G PDI Y
Sbjct: 247 RFPVNLRYFTSLLYG----------------WCRVGKMMEAKYVLVQMNEAGFEPDIVDY 290
Query: 272 NILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLK 331
L++ + AG M A+ L +D++ +G P++ Y LI L +V+R E+A K+ M +
Sbjct: 291 TNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMER 350
Query: 332 HVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEVERA 391
+ CE Y AL++ C+ KI + + + +K G + + + E + +
Sbjct: 351 YECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKK--GLMPSELTYM-HIMVAHEKKES 407
Query: 392 IRGLLELDFRFRDFNLAP----YSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVH 447
LEL + R P Y++++ C+ +V EA+ +++ ++E ++ + V
Sbjct: 408 FEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVI 467
Query: 448 LISGLCAKRNLYDAVVIFLYSLDKG-FELGPKICKELLECLLVSQDKRKYAIDLIGRMKS 506
+I+GL ++ L +A F + +G F + +LL ++ K + A D+ + S
Sbjct: 468 MINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITS 527
Query: 507 RG 508
+G
Sbjct: 528 KG 529
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 149/351 (42%), Gaps = 57/351 (16%)
Query: 51 LIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQR- 109
L+ F A +A + M K G PD ++ +L L G V +A K+F +M R
Sbjct: 189 LVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRF 248
Query: 110 ---------------------------------GLLPDAHCYNAIIKGFCDIGQLDHARS 136
G PD Y ++ G+ + G++ A
Sbjct: 249 PVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYD 308
Query: 137 LHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLC 196
L ++ + +T+LI +CK + EA ++F +ME+ C VT+ AL++G C
Sbjct: 309 LLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFC 368
Query: 197 KAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKL 255
K GK+D+ +++ M + G PS + H+ + ++ E E L
Sbjct: 369 KWGKIDKCYIVLDDMIKKGLMPSELTYM-----HIMVAHEKKESFEECLE---------L 414
Query: 256 LTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYR 315
+ ++ PDI YN++I CK G + A +L+ +++ GLSP T+ +I+GL
Sbjct: 415 MEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGL-- 472
Query: 316 VEREEDAFKIRDHMLKHVCEPSFAV-----YKALMTWLCRGKKISLAFSLY 361
+ + DH + V F+V K L+ + + KK+ +A ++
Sbjct: 473 -ASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVW 522
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 160/377 (42%), Gaps = 51/377 (13%)
Query: 5 RFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEA 64
RF +L F LL G+C+ GK+ EA +L + G + Y++L+ G+ A + +A
Sbjct: 247 RFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADA 306
Query: 65 HSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKG 124
+ L M + G P+ Y ++++ L R+ EA+K+F EM + D Y A++ G
Sbjct: 307 YDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSG 366
Query: 125 FCDIGQLDHA-----------------RSLHVEISGHDGLH------------------- 148
FC G++D +H+ ++ H+
Sbjct: 367 FCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVA-HEKKESFEECLELMEKMRQIEYHP 425
Query: 149 DTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLF 208
D + ++I CK G V+EA ++N+ME+ G P TF +INGL G L EA F
Sbjct: 426 DIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHF 485
Query: 209 YKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVP-D 267
+M + +G VS +L+ + + + + A + + + G +
Sbjct: 486 KEM-----------VTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACELN 534
Query: 268 IKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRD 327
+ ++ I I++ G A ++ P T+ L+ GL ++ E A +I +
Sbjct: 535 VLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMKGLKKLYNREFAGEITE 594
Query: 328 HMLKHVCEP--SFAVYK 342
+ E SF +YK
Sbjct: 595 KVRNMAAEREMSFKMYK 611
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 99/206 (48%), Gaps = 4/206 (1%)
Query: 3 MRR--FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
MRR F+ + + VL+ CK ++EEA+ + +ER + Y++L+ GF K +
Sbjct: 313 MRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGK 372
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
++ + + MIK G++P + Y ++ + E +++ +M Q PD YN
Sbjct: 373 IDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNV 432
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I+ C +G++ A L E+ + T I+I + +G + EA + F +M G
Sbjct: 433 VIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRG 492
Query: 181 CFPSAV--TFNALINGLCKAGKLDEA 204
F + T L+N + K KL+ A
Sbjct: 493 LFSVSQYGTLKLLLNTVLKDKKLEMA 518
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 154/327 (47%), Gaps = 15/327 (4%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLS-GYSSLIDGFFKARRYNEA 64
Q + FN+L+ CK G + A ++ ++R G S YS+L+D F R EA
Sbjct: 192 LQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEA 251
Query: 65 HSLYGRMI-KGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIK 123
L+ MI K GI PD + + +M+ G G V A K+ M + G P+ + Y+A++
Sbjct: 252 VELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMN 311
Query: 124 GFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFP 183
GFC +G++ A+ E+ DT +T L+ C+ G EA ++ +M+ C
Sbjct: 312 GFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRA 371
Query: 184 SAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHM 243
+T+N ++ GL G+ +EA + + + S L +GS + + +
Sbjct: 372 DTLTYNVILRGLSSEGRSEEALQM-----LDQWGSEGVHLNKGSYRII--------LNAL 418
Query: 244 CEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDS 303
C G+ A K L+ +++ G+ P T+N L+ C++G ++ GL P
Sbjct: 419 CCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGP 478
Query: 304 VTYGTLIDGLYRVEREEDAFKIRDHML 330
++G +++ + + + F++ D ++
Sbjct: 479 KSWGAVVESICKERKLVHVFELLDSLV 505
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 111/485 (22%), Positives = 201/485 (41%), Gaps = 79/485 (16%)
Query: 27 EEAVSLLRLLERDGRGI---------------RLSGYSSLIDGFFKARRYNEAHSLYGRM 71
E AVSL++ ERD +G+ + YS L+D + +++ ++ +M
Sbjct: 57 ESAVSLMKR-ERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQM 115
Query: 72 IKGGILPDVILYAIMLRGLSNEGRVGEAVKMF--AEMIQRGLLPDAHCYNAIIKGFCDIG 129
L+ ++R S + ++MF ++I R + P + + + D G
Sbjct: 116 KYETCRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIAR-VKPSLNAISTCLNLLIDSG 174
Query: 130 QLDHARSLHVEISGHDGLH-DTCTHTILICEMCKKGMVREAQEMFNQMEKLG-CFPSAVT 187
+++ +R L + + GL +TC IL+ CK G + A + +M++ G +P+++T
Sbjct: 175 EVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSIT 234
Query: 188 FNALINGLCKAGKLDEAHLLFYKM--EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCE 245
++ L++ L + EA LF M + G SP D V+ + C
Sbjct: 235 YSTLMDCLFAHSRSKEAVELFEDMISKEGISP--------------DPVTFNVMINGFCR 280
Query: 246 AGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVT 305
AG+ A K+L + +G P++ Y+ L+N FCK G + A + F +++ GL D+V
Sbjct: 281 AGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVG 340
Query: 306 YGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYL 365
Y TL++ R ++A K+ M C Y ++ L
Sbjct: 341 YTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGL----------------- 383
Query: 366 KSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDE 425
S GR +++ L+++ +G N Y I+L C ++++
Sbjct: 384 -SSEGRSEEALQMLDQWGSEG----------------VHLNKGSYRIILNALCCNGELEK 426
Query: 426 ALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPK------- 478
A+ SV+ E I + + L+ LC V + + L G GPK
Sbjct: 427 AVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVE 486
Query: 479 -ICKE 482
ICKE
Sbjct: 487 SICKE 491
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 116/495 (23%), Positives = 203/495 (41%), Gaps = 107/495 (21%)
Query: 11 ATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGR 70
A +++ GFC + K++ A S++ +E G G+ + ++ID + K EA +
Sbjct: 284 AVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDK 343
Query: 71 MIKGG-----------------------------------ILPDVILYAIMLRGLSNEGR 95
M+ G I D + Y + LS GR
Sbjct: 344 MLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGR 403
Query: 96 VGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTI 155
V EA ++ EM RG++PD Y +I G+C G++ A L E+ G+ D T+ +
Sbjct: 404 VEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNV 463
Query: 156 LICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGK 215
L+ + + G E E++ +M+ G P+AVT + +I GLC A K+ EA F +E K
Sbjct: 464 LVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLE-QK 522
Query: 216 SPS------------------------------------LFFRLA-QGSDHVSDSVSLQK 238
P LFF L +G + V L+K
Sbjct: 523 CPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDV-LKK 581
Query: 239 KVEHMCEAGQTL---------------NAYKLLTQLADSGVVPDIKTYNILINSFCKAGN 283
+ E G+++ A L + + G++PD+ TY I+I+++C+
Sbjct: 582 MSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNE 641
Query: 284 MNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVERE---------EDAFKIRDHMLKHVC 334
+ A LF+D++ +G+ PD VTY L+D +++ E E + +L+
Sbjct: 642 LQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFS 701
Query: 335 EPSFAV----YKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSI---NALEEYFMKGE 387
+ Y L+ C+ + A L+ + S G + D + + YF KG
Sbjct: 702 AAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDS--GLEPDMVAYTTLISSYFRKGY 759
Query: 388 VERAIRGLLELDFRF 402
++ A+ + EL ++
Sbjct: 760 IDMAVTLVTELSKKY 774
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/466 (22%), Positives = 191/466 (40%), Gaps = 65/466 (13%)
Query: 12 TFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRM 71
T+ +++ C++G LEEA L L+E + + GY + I+G +A +L +
Sbjct: 218 TYAIVVKALCRKGNLEEAAML--LIENES----VFGYKTFINGLCVTGETEKAVALILEL 271
Query: 72 IKGGILPDVILYAIM---LRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
I L L A++ +RG NE ++ A + EM + G D + A+I +C
Sbjct: 272 IDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKN 331
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICE-MCKKGMVREAQEMFNQMEKLGCFPSAVT 187
L A ++ G GL C LI + CK M EA E F + + F V
Sbjct: 332 MNLPEALGFLDKMLGK-GLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVC 390
Query: 188 FNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAG 247
+N + L K G+++EA
Sbjct: 391 YNVAFDALSKLGRVEEA------------------------------------------- 407
Query: 248 QTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYG 307
++LL ++ D G+VPD+ Y LI+ +C G + A L ++ G+SPD +TY
Sbjct: 408 -----FELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYN 462
Query: 308 TLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKS 367
L+ GL R EE+ +I + M +P+ ++ LC +K+ A + +
Sbjct: 463 VLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQK 522
Query: 368 LPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEAL 427
P + + ++ Y G ++A + + L++ R + Y L C +++A
Sbjct: 523 CP---ENKASFVKGYCEAGLSKKAYKAFVRLEYPLRK---SVYIKLFFSLCIEGYLEKAH 576
Query: 428 IIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGF 473
+ + + + + C +I C N+ +A V+F +++G
Sbjct: 577 DVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGL 622
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 169/409 (41%), Gaps = 65/409 (15%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D +NV + K G++EEA LL+ ++ G + Y++LIDG+ + +A L
Sbjct: 387 DRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLI 446
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAII------ 122
MI G+ PD+I Y +++ GL+ G E ++++ M G P+A + II
Sbjct: 447 DEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFA 506
Query: 123 -------------------------KGFCDIGQLDHA------------RSLHVEI---- 141
KG+C+ G A +S+++++
Sbjct: 507 RKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSL 566
Query: 142 -------SGHDGLHDTCTHTI---------LICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
HD L + + +I CK VREAQ +F+ M + G P
Sbjct: 567 CIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDL 626
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMC 244
T+ +I+ C+ +L +A LF M + G P + ++ +
Sbjct: 627 FTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQG 686
Query: 245 EAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSV 304
E G+ A ++L + + +G+ D+ Y +LI+ CK N+ A +LF + GL PD V
Sbjct: 687 EVGKR-KASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMV 745
Query: 305 TYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKK 353
Y TLI +R + A + + K PS + A+ + + K+
Sbjct: 746 AYTTLISSYFRKGYIDMAVTLVTELSKKYNIPSESFEAAVKSAALKAKR 794
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 104/508 (20%), Positives = 190/508 (37%), Gaps = 87/508 (17%)
Query: 29 AVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLR 88
A+S LR L+ G ++ Y++L+ R++ L D+ L ++++
Sbjct: 73 ALSFLRQLKEHGVSPNVNAYATLV-----------------RILTTWGL-DIKLDSVLVE 114
Query: 89 GLSNEGR------VGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEIS 142
+ NE R + E + AE +R + A++K + +G D A + +
Sbjct: 115 LIKNEERGFTVMDLIEVIGEQAEEKKRSFVL-IRVSGALVKAYVSLGMFDEATDVLFQSK 173
Query: 143 GHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLD 202
D + D L+ M + G + +F Q+++LG + T+ ++ LC+ G L+
Sbjct: 174 RLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLE 233
Query: 203 EAHLLF--------YKM---------EIGKSPSLFFRLAQ-----GSD------------ 228
EA +L YK E K+ +L L G D
Sbjct: 234 EAAMLLIENESVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGF 293
Query: 229 ------HVSDSVSLQKK--------------VEHMCEAGQTLNAYKLLTQLADSGVVPDI 268
++SV ++ + ++ C+ A L ++ G+ +
Sbjct: 294 CNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNC 353
Query: 269 KTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDH 328
++++ +CK A + FK+ + + D V Y D L ++ R E+AF++
Sbjct: 354 VIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQE 413
Query: 329 MLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEV 388
M P Y L+ C K+ A L E + + D + N L +
Sbjct: 414 MKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGH 473
Query: 389 ERAIRGLLE-LDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVH 447
E + + E + N S+++ G C A+KV EA FS L++ P +
Sbjct: 474 EEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQ----KCPENKAS 529
Query: 448 LISGLCA---KRNLYDAVVIFLYSLDKG 472
+ G C + Y A V Y L K
Sbjct: 530 FVKGYCEAGLSKKAYKAFVRLEYPLRKS 557
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 159/337 (47%), Gaps = 18/337 (5%)
Query: 13 FNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKAR--RYNEAHSLYGR 70
+N ++ + + GK +A L+ + + G L +++LI+ K+ N A L
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 71 MIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQ 130
+ G+ PD I Y +L S + + AVK+F +M PD YNA+I + G
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 131 LDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNA 190
A L +E+ D T+ L+ ++ + +E++ QM+K+G +T+N
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 191 LINGLCKAGKLDEAHLLFYKME--IGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQ 248
+I+ K G+LD A L+ M+ G++P D+++ ++ + +A +
Sbjct: 408 IIHMYGKQGQLDLALQLYKDMKGLSGRNP--------------DAITYTVLIDSLGKANR 453
Query: 249 TLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGT 308
T+ A L++++ D G+ P ++TY+ LI + KAG A F + G PD++ Y
Sbjct: 454 TVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSV 513
Query: 309 LIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALM 345
++D L R A+ + M+ PS+ +Y+ ++
Sbjct: 514 MLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMI 550
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 100/445 (22%), Positives = 187/445 (42%), Gaps = 70/445 (15%)
Query: 42 GIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGE--A 99
G R+ Y++++ + ++ ++++A L M + G +PD+I + ++ G + A
Sbjct: 222 GDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLA 281
Query: 100 VKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICE 159
V++ + GL PDA YN ++ LD A + ++ H D T+ +I
Sbjct: 282 VELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISV 341
Query: 160 MCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSL 219
+ G+ EA+ +F ++E G FP AVT+N+L+ +
Sbjct: 342 YGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFAR---------------------- 379
Query: 220 FFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFC 279
++ E + E Q Q+ G D TYN +I+ +
Sbjct: 380 -----------------ERNTEKVKEVYQ---------QMQKMGFGKDEMTYNTIIHMYG 413
Query: 280 KAGNMNGAFKLFKDLQ-LKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSF 338
K G ++ A +L+KD++ L G +PD++TY LID L + R +A + ML +P+
Sbjct: 414 KQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTL 473
Query: 339 AVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLEL 398
Y AL+ + K A + L+S DN + + + + ++G R GL
Sbjct: 474 QTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGL--- 530
Query: 399 DFRFRDF-------NLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISG 451
+RD + Y ++++G + + D+ ++E +NP IS
Sbjct: 531 ---YRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEEL-CGMNPLE----ISS 582
Query: 452 LCAKRNLYD-AVVIFLYSLDKGFEL 475
+ K +D A ++ G+EL
Sbjct: 583 VLVKGECFDLAARQLKVAITNGYEL 607
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 142/335 (42%), Gaps = 23/335 (6%)
Query: 12 TFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRM 71
+ N+LL+ C G+LEE ++ L+ G I S ++D F +A E +Y M
Sbjct: 824 SINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSM 883
Query: 72 IKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQL 131
G LP + LY +M+ L RV +A M +EM + + +N+++K + I
Sbjct: 884 KAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDY 943
Query: 132 DHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNAL 191
++ I D T+ LI C+ E + QM LG P T+ +L
Sbjct: 944 KKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSL 1003
Query: 192 INGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMC-----EA 246
I+ K L++A LF ++ +S + L + H ++
Sbjct: 1004 ISAFGKQKCLEQAEQLFEEL------------------LSKGLKLDRSFYHTMMKISRDS 1045
Query: 247 GQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTY 306
G A KLL + ++G+ P + T ++L+ S+ +GN A K+ +L+ + ++ Y
Sbjct: 1046 GSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPY 1105
Query: 307 GTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVY 341
++ID R + + M K EP ++
Sbjct: 1106 SSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIW 1140
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 144/327 (44%), Gaps = 25/327 (7%)
Query: 9 DLATFNVLLNGFCKQGKLEE--AVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
DL +FN L+N K G L AV LL ++ G Y++L+ + + A
Sbjct: 259 DLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVK 318
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
++ M PD+ Y M+ G EA ++F E+ +G PDA YN+++ F
Sbjct: 319 VFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFA 378
Query: 127 DIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKL-GCFPSA 185
+ + ++ ++ D T+ +I K+G + A +++ M+ L G P A
Sbjct: 379 RERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDA 438
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMC 244
+T+ LI+ L KA + EA L +M ++G P +LQ +C
Sbjct: 439 ITYTVLIDSLGKANRTVEAAALMSEMLDVGIKP-----------------TLQTYSALIC 481
Query: 245 ---EAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSP 301
+AG+ A + + SG PD Y+++++ + A+ L++D+ G +P
Sbjct: 482 GYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTP 541
Query: 302 DSVTYGTLIDGLYRVEREEDAFK-IRD 327
Y +I GL + R +D K IRD
Sbjct: 542 SYTLYELMILGLMKENRSDDIQKTIRD 568
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 140/333 (42%), Gaps = 13/333 (3%)
Query: 13 FNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMI 72
+ ++ + KQ ++A S++ L + GR L ++SL+ + + Y A +++ M+
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 73 KGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLD 132
+ G P V I+L L +GR+ E + E+ G ++ F G +
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIF 874
Query: 133 HARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALI 192
+ ++ + L + ++I +CK VR+A+ M ++ME+ +N+++
Sbjct: 875 EVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSML 934
Query: 193 NGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNA 252
++ +E K ++ + + D + + C +
Sbjct: 935 K-------------MYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEG 981
Query: 253 YKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDG 312
Y L+ Q+ + G+ P + TY LI++F K + A +LF++L KGL D Y T++
Sbjct: 982 YLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKI 1041
Query: 313 LYRVEREEDAFKIRDHMLKHVCEPSFAVYKALM 345
+ A K+ M EP+ A LM
Sbjct: 1042 SRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLM 1074
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 152/352 (43%), Gaps = 28/352 (7%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLER-DGRGIRLSGYSSLIDGFFKARRYNEA 64
F +D T+N +++ + KQG+L+ A+ L + ++ GR Y+ LID KA R EA
Sbjct: 398 FGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEA 457
Query: 65 HSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKG 124
+L M+ GI P + Y+ ++ G + G+ EA F+ M++ G PD Y+ ++
Sbjct: 458 AALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDV 517
Query: 125 FCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKL-GCFP 183
+ A L+ ++ + ++I + K+ + Q+ ME+L G P
Sbjct: 518 LLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNP 577
Query: 184 SAVTFNALINGLC---KAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKV 240
++ + L+ G C A +L A Y++E + +L L S
Sbjct: 578 LEIS-SVLVKGECFDLAARQLKVAITNGYELE---NDTLLSILGSYSS------------ 621
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAF-KLFKDLQLKGL 299
+G+ A++LL L + LI CK N++ A + F D + G
Sbjct: 622 -----SGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAALDEYFADPCVHGW 676
Query: 300 SPDSVT-YGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCR 350
S T Y TL+ E +A ++ + CE S +V K+++ C+
Sbjct: 677 CFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCK 728
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/287 (18%), Positives = 125/287 (43%), Gaps = 19/287 (6%)
Query: 82 LYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEI 141
+Y ++ + +A + + Q G PD +N+++ + G + AR++ +
Sbjct: 754 MYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTM 813
Query: 142 SGHDGLHDTCTH-TILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGK 200
DG T IL+ +C G + E + +++ +G S + +++ +AG
Sbjct: 814 M-RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGN 872
Query: 201 LDEAHLLFYKMEI-GKSPSL-FFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQ 258
+ E ++ M+ G P++ +R+ +E +C+ + +A ++++
Sbjct: 873 IFEVKKIYSSMKAAGYLPTIRLYRMM---------------IELLCKGKRVRDAEIMVSE 917
Query: 259 LADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVER 318
+ ++ ++ +N ++ + + ++++ ++ GL PD TY TLI R R
Sbjct: 918 MEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRR 977
Query: 319 EEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYL 365
E+ + + M +P YK+L++ + K + A L+ E L
Sbjct: 978 PEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELL 1024
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/207 (19%), Positives = 81/207 (39%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
+ D T+N L+ +C+ + EE L++ + G +L Y SLI F K + +A
Sbjct: 958 LEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAE 1017
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
L+ ++ G+ D Y M++ + G +A K+ M G+ P + ++ +
Sbjct: 1018 QLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSY 1077
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
G A + + + T ++ +I + E +M+K G P
Sbjct: 1078 SSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDH 1137
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKME 212
+ + + + E LL +E
Sbjct: 1138 RIWTCFVRAASFSKEKIEVMLLLKALE 1164
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 175/373 (46%), Gaps = 15/373 (4%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
+ D+ T + L+NGFC +++AV + +E+ G + + LID K R A
Sbjct: 9 IEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPAL 68
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
+ RM GI P+V+ Y+ ++ GL GR+ +A + EM + + P+ ++A+I +
Sbjct: 69 EVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAY 128
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
G+L S++ + + T++ LI +C V EA +M + M GC P+
Sbjct: 129 AKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNV 188
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCE 245
VT++ L NG K+ ++D+ L M +G +++VS ++ +
Sbjct: 189 VTYSTLANGFFKSSRVDDGIKLLDDMP-----------QRGV--AANTVSCNTLIKGYFQ 235
Query: 246 AGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVT 305
AG+ A + + +G++P+I++YNI++ G + A F+ +Q D +T
Sbjct: 236 AGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIIT 295
Query: 306 YGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYL 365
Y +I G+ + ++A+ + + EP F Y ++ L R + A +L Y
Sbjct: 296 YTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNRFYQ 355
Query: 366 KSLPGRDNDSINA 378
K + R N+S A
Sbjct: 356 KHV--RQNESAPA 366
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 157/329 (47%), Gaps = 18/329 (5%)
Query: 105 EMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKG 164
+M++ G+ PD ++++ GFC + A + ++ D TILI +CK
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 165 MVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLA 224
+V A E+ +M+ G P+ VT+++LI GLCK+G+L +A ++M+ K +
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 225 QGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNM 284
D + L K + YK++ Q++ + P++ TY+ LI C +
Sbjct: 123 ALIDAYAKRGKLSK----------VDSVYKMMIQMS---IDPNVFTYSSLIYGLCMHNRV 169
Query: 285 NGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKAL 344
+ A K+ + KG +P+ VTY TL +G ++ R +D K+ D M + + L
Sbjct: 170 DEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTL 229
Query: 345 MTWLCRGKKISLAFSLYLEYLKS---LPGRDNDSINALEEYFMKGEVERAIRGLLELDFR 401
+ + KI LA ++ Y+ S +P + +I L F GEVE+A+ +
Sbjct: 230 IKGYFQAGKIDLALGVF-GYMTSNGLIPNIRSYNI-VLAGLFANGEVEKALSRFEHMQKT 287
Query: 402 FRDFNLAPYSILLIGFCQAKKVDEALIIF 430
D ++ Y+I++ G C+A V EA +F
Sbjct: 288 RNDLDIITYTIMIHGMCKACMVKEAYDLF 316
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 132/284 (46%), Gaps = 17/284 (5%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGI--RLSGYSSLIDGFFKA 58
M R ++ T++ L+ G CK G+L +A RL E D + I + +S+LID + K
Sbjct: 74 MKDRGISPNVVTYSSLITGLCKSGRLADAER--RLHEMDSKKINPNVITFSALIDAYAKR 131
Query: 59 RRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCY 118
+ ++ S+Y MI+ I P+V Y+ ++ GL RV EA+KM MI +G P+ Y
Sbjct: 132 GKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTY 191
Query: 119 NAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEK 178
+ + GF ++D L ++ +T + LI + G + A +F M
Sbjct: 192 STLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTS 251
Query: 179 LGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQK 238
G P+ ++N ++ GL G++++A F M Q + + D ++
Sbjct: 252 NGLIPNIRSYNIVLAGLFANGEVEKALSRFEHM-------------QKTRNDLDIITYTI 298
Query: 239 KVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAG 282
+ MC+A AY L +L V PD K Y I+I +AG
Sbjct: 299 MIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAG 342
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 138/294 (46%), Gaps = 18/294 (6%)
Query: 175 QMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSV 234
+M KLG P VT ++L+NG C + + +A + +ME ++ D V D++
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQME---------KMGIKRDVVVDTI 53
Query: 235 SLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDL 294
++ +C+ + A ++L ++ D G+ P++ TY+ LI CK+G + A + ++
Sbjct: 54 L----IDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEM 109
Query: 295 QLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKI 354
K ++P+ +T+ LID + + + M++ +P+ Y +L+ LC ++
Sbjct: 110 DSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRV 169
Query: 355 SLAFSLYLEYLKS---LPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYS 411
A + L+ + S P S A +F V+ I+ L ++ R N +
Sbjct: 170 DEAIKM-LDLMISKGCTPNVVTYSTLA-NGFFKSSRVDDGIKLLDDMPQRGVAANTVSCN 227
Query: 412 ILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIF 465
L+ G+ QA K+D AL +F + + N S +++GL A + A+ F
Sbjct: 228 TLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRF 281
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 108/243 (44%), Gaps = 1/243 (0%)
Query: 232 DSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLF 291
D V+ V C + +A + Q+ G+ D+ ILI++ CK + A ++
Sbjct: 12 DIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVL 71
Query: 292 KDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRG 351
K ++ +G+SP+ VTY +LI GL + R DA + M P+ + AL+ +
Sbjct: 72 KRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKR 131
Query: 352 KKISLAFSLYLEYLK-SLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPY 410
K+S S+Y ++ S+ + + M V+ AI+ L + + N+ Y
Sbjct: 132 GKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTY 191
Query: 411 SILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLD 470
S L GF ++ +VD+ + + + + + N SC LI G + A+ +F Y
Sbjct: 192 STLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTS 251
Query: 471 KGF 473
G
Sbjct: 252 NGL 254
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 104/250 (41%), Gaps = 8/250 (3%)
Query: 263 GVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDA 322
G+ PDI T + L+N FC + ++ A + ++ G+ D V LID L + A
Sbjct: 8 GIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPA 67
Query: 323 FKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEY 382
++ M P+ Y +L+T LC+ +++ A E + + +AL +
Sbjct: 68 LEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDA 127
Query: 383 FMK----GEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNI 438
+ K +V+ + ++++ D N+ YS L+ G C +VDEA+ + ++
Sbjct: 128 YAKRGKLSKVDSVYKMMIQMSI---DPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGC 184
Query: 439 NINPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKELLECLLVSQDKRKYAI 498
N + L +G + D + + +G C L++ K A+
Sbjct: 185 TPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYF-QAGKIDLAL 243
Query: 499 DLIGRMKSRG 508
+ G M S G
Sbjct: 244 GVFGYMTSNG 253
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 179/414 (43%), Gaps = 15/414 (3%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D F++L+ G+ K G +EE + R + G + + + L++G K + +Y
Sbjct: 165 DPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVY 224
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
M + GI P+ + I+ N+ E +M + G PD YN ++ +C
Sbjct: 225 SVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRR 284
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
G+L A L+ + + D T+T LI +CK G VREA + F++M G P +++
Sbjct: 285 GRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSY 344
Query: 189 NALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQ 248
N LI CK G + ++ L ++M G+ V D + + VE G+
Sbjct: 345 NTLIYAYCKEGMMQQSKKLLHEM-------------LGNSVVPDRFTCKVIVEGFVREGR 391
Query: 249 TLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLF-KDLQLKGLSPDSVTYG 307
L+A + +L V + + LI S C+ G A L + ++ +G TY
Sbjct: 392 LLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYN 451
Query: 308 TLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKS 367
LI+ L R + E+A ++ + Y+AL+ LCR + A SL E S
Sbjct: 452 NLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDS 511
Query: 368 LPGRDNDSINALEEYFMKG-EVERAIRGLLELDFRFRDFNLAPYSILLIGFCQA 420
D+ AL + K + ++A R L FR F+ Y+ L+ C+
Sbjct: 512 EVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCET 565
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 132/316 (41%), Gaps = 53/316 (16%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M+ RR DL T+ L+ G CK G R
Sbjct: 297 MYRRRVVPDLVTYTSLIKGLCKDG-----------------------------------R 321
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
EAH + RM+ GI PD + Y ++ EG + ++ K+ EM+ ++PD
Sbjct: 322 VREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKV 381
Query: 121 IIKGFCDIGQLDHARSLHVEIS--GHDGLHDTCTHTILICEMCKKGMVREAQEMFNQ-ME 177
I++GF G+L A + VE+ D + C LI +C++G A+ + ++ +E
Sbjct: 382 IVEGFVREGRLLSAVNFVVELRRLKVDIPFEVC--DFLIVSLCQEGKPFAAKHLLDRIIE 439
Query: 178 KLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQ 237
+ G T+N LI L + ++EA +L K+ + + V D+ + +
Sbjct: 440 EEGHEAKPETYNNLIESLSRCDAIEEALVLKGKL-------------KNQNQVLDAKTYR 486
Query: 238 KKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLK 297
+ +C G+ A L+ ++ DS V PD L+ +CK + + A +L ++
Sbjct: 487 ALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAME 546
Query: 298 GLSPDSVTYGTLIDGL 313
D +Y +L+ +
Sbjct: 547 FRIFDPESYNSLVKAV 562
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 159/350 (45%), Gaps = 16/350 (4%)
Query: 3 MRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFK-ARRY 61
++ + D+ + +L+ + + GK E+A+ L ++ G L Y+ ++D F K R +
Sbjct: 203 LQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSW 262
Query: 62 NEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAI 121
+ + M G+ D + +L + EG + EA + FAE+ G P YNA+
Sbjct: 263 RKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNAL 322
Query: 122 IKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGC 181
++ F G A S+ E+ + D+ T+ L+ + G +EA + M K G
Sbjct: 323 LQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGV 382
Query: 182 FPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVE 241
P+A+T+ +I+ KAGK DEA LFY M + + V ++ + +
Sbjct: 383 MPNAITYTTVIDAYGKAGKEDEALKLFYSM-------------KEAGCVPNTCTYNAVLS 429
Query: 242 HMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNG-AFKLFKDLQLKGLS 300
+ + ++ K+L + +G P+ T+N ++ + C M+ ++F++++ G
Sbjct: 430 LLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML-ALCGNKGMDKFVNRVFREMKSCGFE 488
Query: 301 PDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCR 350
PD T+ TLI R E DA K+ M + Y AL+ L R
Sbjct: 489 PDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALAR 538
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/460 (21%), Positives = 192/460 (41%), Gaps = 39/460 (8%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D T+N L+ + + G +EA ++ ++ + G Y+++ID + KA + +EA L+
Sbjct: 350 DSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLF 409
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
M + G +P+ Y +L L + R E +KM +M G P+ +N ++ +
Sbjct: 410 YSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNK 469
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
G + E+ D T LI + G +A +M+ +M + G T+
Sbjct: 470 GMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTY 529
Query: 189 NALINGLCKAGKLDEAHLLFYKME------IGKSPSLFFR-LAQGSDHVSDSVSLQKKVE 241
NAL+N L + G + M+ S SL + A+G +++ +++E
Sbjct: 530 NALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLG-----IERIE 584
Query: 242 HMCEAGQTLNAYKLL--------------------TQLADSGVVPDIKTYNILINSFCKA 281
+ + GQ ++ LL T G PD+ +N +++ F +
Sbjct: 585 NRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRN 644
Query: 282 GNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVY 341
+ A + + ++ GLSPD VTY +L+D R A +I + K +P Y
Sbjct: 645 NMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSY 704
Query: 342 KALMTWLCRGKKISLAFSLYLEY----LKSLPGRDNDSINALEEYFMKGEVERAIRGLLE 397
++ CR + A + E ++ N ++ M E+E I + +
Sbjct: 705 NTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAK 764
Query: 398 LDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFN 437
D R + + +++ G+C+A K EA+ S + F+
Sbjct: 765 NDCRPNELT---FKMVVDGYCRAGKYSEAMDFVSKIKTFD 801
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/466 (21%), Positives = 187/466 (40%), Gaps = 49/466 (10%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D T + +L+ ++G L EA L+ G Y++L+ F KA Y EA S+
Sbjct: 280 DEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVL 339
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
M + D + Y ++ G EA + M ++G++P+A Y +I +
Sbjct: 340 KEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKA 399
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
G+ D A L + + +TCT+ ++ + KK E +M M+ GC P+ T+
Sbjct: 400 GKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATW 459
Query: 189 NALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQ 248
N ++ LC +D K + FR + D + + G
Sbjct: 460 NTML-ALCGNKGMD------------KFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGS 506
Query: 249 TLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGT 308
++A K+ ++ +G + TYN L+N+ + G+ + D++ KG P +Y
Sbjct: 507 EVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSL 566
Query: 309 LID---------GLYRVE---REEDAFK----IRDHML-------------------KHV 333
++ G+ R+E +E F +R +L KH
Sbjct: 567 MLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHG 626
Query: 334 CEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEE-YFMKGEVERAI 392
+P ++ ++++ R A + + D + N+L + Y +GE +A
Sbjct: 627 YKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAE 686
Query: 393 RGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNI 438
L L+ +L Y+ ++ GFC+ + EA+ + S + E I
Sbjct: 687 EILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGI 732
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 158/374 (42%), Gaps = 23/374 (6%)
Query: 11 ATFNVLLNGFCKQGKLEEAVS-LLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYG 69
AT+N +L C +++ V+ + R ++ G +++LI + + +A +YG
Sbjct: 457 ATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYG 515
Query: 70 RMIKGGILPDVILYAIMLRGLSNEG--RVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCD 127
M + G V Y +L L+ +G R GE V ++M +G P Y+ +++ +
Sbjct: 516 EMTRAGFNACVTTYNALLNALARKGDWRSGENV--ISDMKSKGFKPTETSYSLMLQCYAK 573
Query: 128 IGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVT 187
G + I L+ K + ++ F +K G P V
Sbjct: 574 GGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVI 633
Query: 188 FNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEA 246
FN++++ + D+A + + E G SP L V+ ++
Sbjct: 634 FNSMLSIFTRNNMYDQAEGILESIREDGLSPDL--------------VTYNSLMDMYVRR 679
Query: 247 GQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTY 306
G+ A ++L L S + PD+ +YN +I FC+ G M A ++ ++ +G+ P TY
Sbjct: 680 GECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTY 739
Query: 307 GTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLK 366
T + G + + + + M K+ C P+ +K ++ CR K S A ++ +K
Sbjct: 740 NTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMD-FVSKIK 798
Query: 367 SL-PGRDNDSINAL 379
+ P D+ SI L
Sbjct: 799 TFDPCFDDQSIQRL 812
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 89/199 (44%), Gaps = 35/199 (17%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
++ D+ FN +L+ F + ++A +L + DG L Y+SL+D + + +A
Sbjct: 627 YKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAE 686
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
+ + K + PD++ Y +++G G + EAV+M +EM +RG+ P YN + G+
Sbjct: 687 EILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGY 746
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
+ GM E +++ M K C P+
Sbjct: 747 TAM-----------------------------------GMFAEIEDVIECMAKNDCRPNE 771
Query: 186 VTFNALINGLCKAGKLDEA 204
+TF +++G C+AGK EA
Sbjct: 772 LTFKMVVDGYCRAGKYSEA 790
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 126/292 (43%), Gaps = 17/292 (5%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
F + T+N LLN ++G +++ ++ G + YS ++ + K Y
Sbjct: 522 FNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIE 581
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
+ R+ +G I P +L +L + + + F + G PD +N+++ F
Sbjct: 582 RIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIF 641
Query: 126 CDIGQLDHARSLHVEISGHDGLH-DTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPS 184
D A + +E DGL D T+ L+ ++G +A+E+ +EK P
Sbjct: 642 TRNNMYDQAEGI-LESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPD 700
Query: 185 AVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHM 243
V++N +I G C+ G + EA + +M E G P +F S + ++ + ++E +
Sbjct: 701 LVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYT--AMGMFAEIEDV 758
Query: 244 CEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQ 295
E +A + P+ T+ ++++ +C+AG + A ++
Sbjct: 759 IEC------------MAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIK 798
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 94/440 (21%), Positives = 172/440 (39%), Gaps = 26/440 (5%)
Query: 86 MLRGLSNEGRVGEAVKMFAEMI---QRGLLPDAHCYNAIIKGFCDI----GQLDHARSLH 138
+++GL + G AV +F ++ G L H +I+ F I Q A L
Sbjct: 142 LVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDH---QVIEIFVRILGRESQYSVAAKLL 198
Query: 139 VEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKA 198
+I + L D +T ++ + G +A ++F +M+++G P+ VT+N +++ K
Sbjct: 199 DKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKM 258
Query: 199 GKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQ 258
G+ + ++ +S L F D + + G A + +
Sbjct: 259 GR--SWRKILGVLDEMRSKGLKF----------DEFTCSTVLSACAREGLLREAKEFFAE 306
Query: 259 LADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVER 318
L G P TYN L+ F KAG A + K+++ DSVTY L+ R
Sbjct: 307 LKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGF 366
Query: 319 EEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINA 378
++A + + M K P+ Y ++ + K A L+ ++ + + NA
Sbjct: 367 SKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNA 426
Query: 379 LEEYF-MKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALI-IFSVLDEF 436
+ K I+ L ++ N A ++ +L C K +D+ + +F +
Sbjct: 427 VLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML-ALCGNKGMDKFVNRVFREMKSC 485
Query: 437 NININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKELLECLLVSQDKRKY 496
+ + LIS + DA ++ GF LL L D R
Sbjct: 486 GFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRS- 544
Query: 497 AIDLIGRMKSRGYRLHKYQY 516
++I MKS+G++ + Y
Sbjct: 545 GENVISDMKSKGFKPTETSY 564
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 63/141 (44%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
DL T+N L++ + ++G+ +A +L+ LE+ L Y+++I GF + EA +
Sbjct: 665 DLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRML 724
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
M + GI P + Y + G + G E + M + P+ + ++ G+C
Sbjct: 725 SEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRA 784
Query: 129 GQLDHARSLHVEISGHDGLHD 149
G+ A +I D D
Sbjct: 785 GKYSEAMDFVSKIKTFDPCFD 805
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 151/308 (49%), Gaps = 15/308 (4%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
+ ++ +N ++NG+ K G +++A+ + + ++ + ++ LI+G+ ++ +++ A
Sbjct: 190 KPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALD 249
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGL-LPDAHCYNAIIKGF 125
L+ M + G P+V+ + ++RG + G++ E VKM EMI+ G +A C ++ G
Sbjct: 250 LFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATC-EILVDGL 308
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
C G++D A L +++ L + L+ ++C + A EM ++ K G P
Sbjct: 309 CREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCF 368
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCE 245
+ L+ GL K+G+ ++A KM + + DSV+ + +C
Sbjct: 369 IACTTLVEGLRKSGRTEKASGFMEKM-------------MNAGILPDSVTFNLLLRDLCS 415
Query: 246 AGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVT 305
+ + +A +L + G PD TY++L++ F K G L ++ K + PD T
Sbjct: 416 SDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFT 475
Query: 306 YGTLIDGL 313
Y L+DGL
Sbjct: 476 YNRLMDGL 483
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 159/344 (46%), Gaps = 19/344 (5%)
Query: 13 FNVLLNGFCKQGKLEEAVSLLRLLER--DGRGIRLSGYSSLIDGFFKARRYNEAHSLYGR 70
F ++ +C+ K++ A+ ++R DG+ + Y+++++G+ K+ ++A Y R
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDGKP-NVGVYNTVVNGYVKSGDMDKALRFYQR 218
Query: 71 MIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQ 130
M K PDV + I++ G + A+ +F EM ++G P+ +N +I+GF G+
Sbjct: 219 MGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGK 278
Query: 131 LDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNA 190
++ + E+ T IL+ +C++G V +A + + PS + +
Sbjct: 279 IEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGS 338
Query: 191 LINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQT 249
L+ LC K A + ++ + G++P ++ VE + ++G+T
Sbjct: 339 LVEKLCGENKAVRAMEMMEELWKKGQTPCF--------------IACTTLVEGLRKSGRT 384
Query: 250 LNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTL 309
A + ++ ++G++PD T+N+L+ C + + A +L KG PD TY L
Sbjct: 385 EKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVL 444
Query: 310 IDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWL-CRGK 352
+ G + R ++ + + ML P Y LM L C GK
Sbjct: 445 VSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGK 488
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 136/291 (46%), Gaps = 19/291 (6%)
Query: 188 FNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAG 247
F + I+ C+A K+D A L F M+ RL G +V ++ V ++G
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMK---------RLIDGKPNVGVYNTV---VNGYVKSG 207
Query: 248 QTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYG 307
A + ++ PD+ T+NILIN +C++ + A LF++++ KG P+ V++
Sbjct: 208 DMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFN 267
Query: 308 TLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYL-- 365
TLI G + E+ K+ M++ C S A + L+ LCR ++ A L L+ L
Sbjct: 268 TLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNK 327
Query: 366 KSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDE 425
+ LP + D + +E+ + + RA+ + EL + + + L+ G ++ + ++
Sbjct: 328 RVLPS-EFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEK 386
Query: 426 ALIIFSVLDEFNININPTSCVH--LISGLCAKRNLYDAVVIFLYSLDKGFE 474
A + N I P S L+ LC+ + DA + L + KG+E
Sbjct: 387 ASGFMEKM--MNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYE 435
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 104/428 (24%), Positives = 182/428 (42%), Gaps = 56/428 (13%)
Query: 41 RGIRL-SGYSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEA 99
R RL S +++LID + KA R N+A +L+ M+K G+ D + + M+ G + EA
Sbjct: 300 RKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEA 359
Query: 100 VKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICE 159
+ +M ++G+ PD YN ++ D G ++ A + +I DT TH ++
Sbjct: 360 ESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHI 419
Query: 160 MCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSL 219
+C++ MV E + + +M++ + ++ G + +A LF + ++
Sbjct: 420 LCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQL------ 473
Query: 220 FFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLAD-SGVVPDIKTYNILINSF 278
D V S +L ++ E G + A + + SG D+ YN++I ++
Sbjct: 474 --------DCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAY 525
Query: 279 CKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSF 338
KA A LFK ++ +G PD TY +L L V+ ++A +I ML C+P
Sbjct: 526 GKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGC 585
Query: 339 AVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLEL 398
Y A++ R +S A LY A+E+ +K
Sbjct: 586 KTYAAMIASYVRLGLLSDAVDLY---------------EAMEKTGVKP------------ 618
Query: 399 DFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISG------L 452
N Y L+ GF ++ V+EA+ F +++E + N LI L
Sbjct: 619 -------NEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCL 671
Query: 453 CAKRNLYD 460
R +YD
Sbjct: 672 EEARRVYD 679
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/398 (22%), Positives = 177/398 (44%), Gaps = 24/398 (6%)
Query: 5 RFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEA 64
R R +TFN L++ + K G+L +A +L + + G I ++++I +EA
Sbjct: 300 RKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEA 359
Query: 65 HSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKG 124
SL +M + GI PD Y I+L ++ G + A++ + ++ + GL PD + A++
Sbjct: 360 ESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHI 419
Query: 125 FCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPS 184
C + ++ E+ + D + +++ +G+V +A+ +F + + L C S
Sbjct: 420 LCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQ-LDCVLS 478
Query: 185 AVTFNALINGLCKAGKLDEAHLLFY-----------------------KMEIGKSPSLFF 221
+ T A+I+ + G EA +FY K ++ + F
Sbjct: 479 STTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLF 538
Query: 222 RLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKA 281
+ + D + + + A ++L ++ DSG P KTY +I S+ +
Sbjct: 539 KGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRL 598
Query: 282 GNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVY 341
G ++ A L++ ++ G+ P+ V YG+LI+G E+A + M +H + + V
Sbjct: 599 GLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVL 658
Query: 342 KALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINAL 379
+L+ + + A +Y + S G D + N++
Sbjct: 659 TSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSM 696
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 167/392 (42%), Gaps = 57/392 (14%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D T+N L ++EA +L + G Y+++I + + ++A LY
Sbjct: 549 DECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLY 608
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
M K G+ P+ ++Y ++ G + G V EA++ F M + G+ + ++IK + +
Sbjct: 609 EAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKV 668
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFN-------------- 174
G L+ AR ++ ++ +G D ++ G+V EA+ +FN
Sbjct: 669 GCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFA 728
Query: 175 --------------------QMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM--- 211
+M + G +FN ++ G+L E LF++M
Sbjct: 729 TMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVE 788
Query: 212 -----EIGKSPSLFFRLAQG---SDHVSDSVSLQKKVEHMCEAGQT--------LNAYKL 255
+ G +LF L +G S+ VS + + + + T L AY L
Sbjct: 789 RKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLYAYAL 848
Query: 256 LT-QLADSGVVP-DIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGL 313
+ Q SG +P + YN +I ++ +G+++ A K + +Q KGL PD VT L+ G+
Sbjct: 849 ESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLV-GI 907
Query: 314 Y-RVEREEDAFKIRDHMLKHVCEPSFAVYKAL 344
Y + E ++ + EPS +++KA+
Sbjct: 908 YGKAGMVEGVKRVHSRLTFGELEPSQSLFKAV 939
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 104/196 (53%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
++ T+N +++ FC G+ +A LLR + + +S+LI+ F K R+ +EA +Y
Sbjct: 44 NVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIY 103
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
M++ I P I Y M+ G + RV +A +M M +G PD ++ +I G+C
Sbjct: 104 KEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKA 163
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
++D+ + E+ + +T T+T LI C+ G + AQ++ N+M G P +TF
Sbjct: 164 KRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITF 223
Query: 189 NALINGLCKAGKLDEA 204
+ ++ GLC +L +A
Sbjct: 224 HCMLAGLCSKKELRKA 239
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 124/298 (41%), Gaps = 54/298 (18%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M + D+ +++ CK G A +L + G + Y+ +ID F + R
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+++A L MI+ I PD++ ++ ++ E +V EA +++ EM++ + P YN+
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I GFC K+ V +A+ M + M G
Sbjct: 121 MIDGFC-----------------------------------KQDRVDDAKRMLDSMASKG 145
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKME---IGKSPSLFFRLAQGSDHVSDSVSLQ 237
C P VTF+ LING CKA ++D +F +M I + + L G V D + Q
Sbjct: 146 CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQ 205
Query: 238 KKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQ 295
LL ++ GV PD T++ ++ C + AF + +DLQ
Sbjct: 206 ----------------DLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQ 247
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 123/262 (46%), Gaps = 13/262 (4%)
Query: 106 MIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGM 165
M Q + D AI+ C G +A++L E+ + T+ +I C G
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 166 VREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQ 225
+A ++ M + P VTF+ALIN K K+ EA ++ +M S+F
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEM---LRWSIF----- 112
Query: 226 GSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMN 285
+++ ++ C+ + +A ++L +A G PD+ T++ LIN +CKA ++
Sbjct: 113 -----PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVD 167
Query: 286 GAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALM 345
++F ++ +G+ ++VTY TLI G +V + A + + M+ P + + ++
Sbjct: 168 NGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCML 227
Query: 346 TWLCRGKKISLAFSLYLEYLKS 367
LC K++ AF++ + KS
Sbjct: 228 AGLCSKKELRKAFAILEDLQKS 249
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 117/242 (48%), Gaps = 2/242 (0%)
Query: 226 GSDHV-SDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNM 284
G H+ +D V V+ +C+ G +NA L T++ + G+ P++ TYN +I+SFC +G
Sbjct: 2 GQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRW 61
Query: 285 NGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKAL 344
+ A +L + + K ++PD VT+ LI+ + + +A +I ML+ P+ Y ++
Sbjct: 62 SDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSM 121
Query: 345 MTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGE-VERAIRGLLELDFRFR 403
+ C+ ++ A + D + + L + K + V+ + E+ R
Sbjct: 122 IDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGI 181
Query: 404 DFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVV 463
N Y+ L+ GFCQ +D A + + + + + + +++GLC+K+ L A
Sbjct: 182 VANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFA 241
Query: 464 IF 465
I
Sbjct: 242 IL 243
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 94/196 (47%), Gaps = 1/196 (0%)
Query: 259 LADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVER 318
+ S + D+ +++ CK GN A LF ++ KG+ P+ +TY +ID R
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 319 EEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINA 378
DA ++ HM++ P + AL+ + +K+S A +Y E L+ + N+
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 379 LEEYFMKGE-VERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFN 437
+ + F K + V+ A R L + + ++ +S L+ G+C+AK+VD + IF +
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 438 ININPTSCVHLISGLC 453
I N + LI G C
Sbjct: 181 IVANTVTYTTLIHGFC 196
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 135/294 (45%), Gaps = 16/294 (5%)
Query: 13 FNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMI 72
+N LL+ + G +EE L + D + +++L++G+ K EA +I
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 73 KGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLD 132
+ G PD Y + G V A K+F EM Q G + Y +I G + ++D
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 133 HARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALI 192
A SL V++ + + T+T+LI +C G EA +F QM + G P + LI
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Query: 193 NGLCKAGKLDEAH-LLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLN 251
C LDEA LL + +E G P++ ++ ++ C+
Sbjct: 303 QSFCSGDTLDEASGLLEHMLENGLMPNV--------------ITYNALIKGFCKKN-VHK 347
Query: 252 AYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVT 305
A LL+++ + +VPD+ TYN LI C +GN++ A++L ++ GL P+ T
Sbjct: 348 AMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 124/262 (47%), Gaps = 14/262 (5%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D+ TFN L+NG+CK G + EA + L + G Y+S I G + + + A ++
Sbjct: 154 DIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVF 213
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
M + G + + Y ++ GL ++ EA+ + +M P+ Y +I C
Sbjct: 214 KEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGS 273
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
GQ A +L ++S D C +T+LI C + EA + M + G P+ +T+
Sbjct: 274 GQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITY 333
Query: 189 NALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQ 248
NALI G CK + +A L KM L Q + V D ++ + C +G
Sbjct: 334 NALIKGFCKKN-VHKAMGLLSKM-----------LEQ--NLVPDLITYNTLIAGQCSSGN 379
Query: 249 TLNAYKLLTQLADSGVVPDIKT 270
+AY+LL+ + +SG+VP+ +T
Sbjct: 380 LDSAYRLLSLMEESGLVPNQRT 401
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 36/206 (17%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
R+ ++ L+ G + K++EA+SLL ++ D + Y+ LID + + +EA +
Sbjct: 222 HRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMN 281
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
L+ +M + GI PD +Y ++++ + + EA + M++ GL+P+ YNA+IKGFC
Sbjct: 282 LFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFC 341
Query: 127 DIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAV 186
K V +A + ++M + P +
Sbjct: 342 ------------------------------------KKNVHKAMGLLSKMLEQNLVPDLI 365
Query: 187 TFNALINGLCKAGKLDEAHLLFYKME 212
T+N LI G C +G LD A+ L ME
Sbjct: 366 TYNTLIAGQCSSGNLDSAYRLLSLME 391
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 129/277 (46%), Gaps = 19/277 (6%)
Query: 188 FNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEA 246
+N L++ L + G ++E L+ +M E SP ++ + V C+
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIY--------------TFNTLVNGYCKL 168
Query: 247 GQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTY 306
G + A + +T L +G PD TY I C+ ++ AFK+FK++ G + V+Y
Sbjct: 169 GYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSY 228
Query: 307 GTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLK 366
LI GL+ ++ ++A + M C P+ Y L+ LC + S A +L+ + +
Sbjct: 229 TQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSE 288
Query: 367 SLPGRDNDSINALEEYFMKGEVERAIRGLLE--LDFRFRDFNLAPYSILLIGFCQAKKVD 424
S D+ L + F G+ GLLE L+ N+ Y+ L+ GFC+ K V
Sbjct: 289 SGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMP-NVITYNALIKGFCK-KNVH 346
Query: 425 EALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDA 461
+A+ + S + E N+ + + LI+G C+ NL A
Sbjct: 347 KAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSA 383
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 102/212 (48%), Gaps = 13/212 (6%)
Query: 269 KTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDH 328
K YN L++S + G + +L+ ++ +SPD T+ TL++G ++ +A +
Sbjct: 121 KCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTW 180
Query: 329 MLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEV 388
+++ C+P + Y + +T CR K++ AF ++ E ++ R+ S L + G
Sbjct: 181 LIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQL----IYGLF 236
Query: 389 E-RAIRGLLELDFRFRDFNLAP----YSILLIGFCQAKKVDEALIIFSVLDEFNININPT 443
E + I L L + +D N P Y++L+ C + + EA+ +F + E I P
Sbjct: 237 EAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSE--SGIKPD 294
Query: 444 SCVH--LISGLCAKRNLYDAVVIFLYSLDKGF 473
C++ LI C+ L +A + + L+ G
Sbjct: 295 DCMYTVLIQSFCSGDTLDEASGLLEHMLENGL 326
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 152/317 (47%), Gaps = 15/317 (4%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R D T++ L+ F K+G + A+S L+ +E+D L YS+LI+ +
Sbjct: 181 MRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCD 240
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
Y++A S++ R+ + GI PD++ Y M+ EA + EM + G+LP+ Y+
Sbjct: 241 YSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYST 300
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
++ + + + A S+ E+ + D T I+I + MV+EA +F + K+
Sbjct: 301 LLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMD 360
Query: 181 CFPSAVTFNALINGLCKAGKLDEA-HLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKK 239
P+ V++N ++ +A EA HL FRL Q D + V+
Sbjct: 361 IEPNVVSYNTILRVYGEAELFGEAIHL--------------FRLMQRKDIEQNVVTYNTM 406
Query: 240 VEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGL 299
++ + + A L+ ++ G+ P+ TY+ +I+ + KAG ++ A LF+ L+ G+
Sbjct: 407 IKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGV 466
Query: 300 SPDSVTYGTLIDGLYRV 316
D V Y T+I RV
Sbjct: 467 EIDQVLYQTMIVAYERV 483
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/363 (20%), Positives = 158/363 (43%), Gaps = 20/363 (5%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
+ +++ LL+ + + K EA+S+ ++ + L+ + +ID + + EA L+
Sbjct: 294 NTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLF 353
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
+ K I P+V+ Y +LR GEA+ +F M ++ + + YN +IK +
Sbjct: 354 WSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKT 413
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
+ + A +L E+ + T++ +I K G + A +F ++ G V +
Sbjct: 414 MEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLY 473
Query: 189 NALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQ 248
+I + G + A L +++++ D++ + + + +AG+
Sbjct: 474 QTMIVAYERVGLMGHAKRLLHELKL-----------------PDNIPRETAITILAKAGR 516
Query: 249 TLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGT 308
T A + Q +SG V DI + +IN + + ++F+ ++ G PDS
Sbjct: 517 TEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAM 576
Query: 309 LIDGLYRVERE-EDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKS 367
+++ Y +RE E A + M + C V+ +++ K + SL+ + L+S
Sbjct: 577 VLNA-YGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLF-QRLES 634
Query: 368 LPG 370
P
Sbjct: 635 DPN 637
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 128/312 (41%), Gaps = 34/312 (10%)
Query: 78 PDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSL 137
P V Y ++LR + + A +F EM QR L PD + Y+ +I F G D A S
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 212
Query: 138 HVEISGHDGLHDTCTHTILI------CEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNAL 191
++ D ++ LI C+ K A +F+++++ G P V +N++
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIELSRRLCDYSK------AISIFSRLKRSGITPDLVAYNSM 266
Query: 192 INGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQ--KKVEHMCEAGQ 248
IN KA EA LL +M E G P+ S +V + L+ M E
Sbjct: 267 INVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNC 326
Query: 249 TLN-------------------AYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFK 289
L+ A +L L + P++ +YN ++ + +A A
Sbjct: 327 ALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIH 386
Query: 290 LFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLC 349
LF+ +Q K + + VTY T+I + E A + M EP+ Y +++
Sbjct: 387 LFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWG 446
Query: 350 RGKKISLAFSLY 361
+ K+ A +L+
Sbjct: 447 KAGKLDRAATLF 458
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 95/214 (44%), Gaps = 8/214 (3%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSG--YSSLIDGFFKA 58
M + ++++ T+N ++ + K + E+A +L++ E RGI + YS++I + KA
Sbjct: 391 MQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQ--EMQSRGIEPNAITYSTIISIWGKA 448
Query: 59 RRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCY 118
+ + A +L+ ++ G+ D +LY M+ G +G A ++ E+ LPD
Sbjct: 449 GKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHEL----KLPDNIPR 504
Query: 119 NAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEK 178
I G+ + A + + + D +I + E+F +M
Sbjct: 505 ETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRT 564
Query: 179 LGCFPSAVTFNALINGLCKAGKLDEAHLLFYKME 212
G FP + ++N K + ++A ++ +M+
Sbjct: 565 AGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQ 598
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 86/190 (45%), Gaps = 1/190 (0%)
Query: 261 DSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREE 320
++ P + YN+++ + +A + A LF +++ + L+PD TY TLI + +
Sbjct: 148 EAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFD 207
Query: 321 DAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALE 380
A M + +Y L+ R S A S++ +S D + N++
Sbjct: 208 SALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMI 267
Query: 381 EYFMKGEVERAIRGLL-ELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNIN 439
+ K ++ R R L+ E++ N YS LL + + K EAL +F+ + E N
Sbjct: 268 NVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCA 327
Query: 440 INPTSCVHLI 449
++ T+C +I
Sbjct: 328 LDLTTCNIMI 337
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 171/367 (46%), Gaps = 29/367 (7%)
Query: 5 RFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEA 64
+F +L F LL G+C++GKL EA +L ++ G + +++L+ G+ A + +A
Sbjct: 231 KFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADA 290
Query: 65 HSLYGRMIKGGILPDVILYAIMLRGL-SNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIK 123
+ L M K G P+V Y ++++ L E R+ EA+++F EM + G D Y A+I
Sbjct: 291 YDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALIS 350
Query: 124 GFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFP 183
GFC G +D S+ ++ + T+ ++ KK E E+ +M++ GC P
Sbjct: 351 GFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHP 410
Query: 184 SAVTFNALINGLCKAGKLDEAHLLFYKMEI-GKSPSL--FFRLAQG----------SDHV 230
+ +N +I CK G++ EA L+ +ME G SP + F + G +H
Sbjct: 411 DLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHF 470
Query: 231 SDSVS-----------LQKKVEHMCEAGQTLNAYKLLTQLAD--SGVVPDIKTYNILINS 277
+ VS L+ + ++ + A + + +++ S ++ + I I++
Sbjct: 471 KEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHA 530
Query: 278 FCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEP- 336
G++ A D+ L P TY L+ GL ++ A +I + ++K E
Sbjct: 531 LYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGLNKLYNRTIAAEITEKVVKMASERE 590
Query: 337 -SFAVYK 342
SF +YK
Sbjct: 591 MSFKMYK 597
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 162/364 (44%), Gaps = 62/364 (17%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
+ D F LL+ CK G ++EA + + R+ L ++SL+ G+ + + EA
Sbjct: 198 LEPDEYVFGCLLDALCKNGSVKEASKVFEDM-REKFPPNLRYFTSLLYGWCREGKLMEAK 256
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
+ +M + G+ PD++++ +L G ++ G++ +A + +M +RG P+ +CY +I+
Sbjct: 257 EVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQAL 316
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
C + + EA +F +ME+ GC
Sbjct: 317 CRTEK----------------------------------RMDEAMRVFVEMERYGCEADI 342
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMC 244
VT+ ALI+G CK G +D+ + + M + G PS ++ V+ +KK
Sbjct: 343 VTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQV-------TYMQIMVAHEKK----- 390
Query: 245 EAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSV 304
Q +L+ ++ G PD+ YN++I CK G + A +L+ +++ GLSP
Sbjct: 391 --EQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVD 448
Query: 305 TYGTLIDGLYRVEREEDAFKIR--DHMLKHVCE-----PSFAVYKALMTWLCRGKKISLA 357
T+ +I+G F I +H + V P + K+L+ L R K+ +A
Sbjct: 449 TFVIMINGF-----TSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMA 503
Query: 358 FSLY 361
++
Sbjct: 504 KDVW 507
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 174/383 (45%), Gaps = 48/383 (12%)
Query: 13 FNVLLNGFCKQGKLEEAVS----------LLRLLERDGR----GIRLSGYSSLIDGFF-- 56
+ +L N + KLE A++ ++R+L R G G R +++ G+F
Sbjct: 71 YRILRNHHSRVPKLELALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPGYFHS 130
Query: 57 ------------KARRYNEAHSLYGRMIKGGILPDVI---LYAIMLRGLSNEGRVGEAVK 101
K R++ L M K P++I L+ +++R ++ V +AV+
Sbjct: 131 YEVCKSMVMILSKMRQFGAVWGLIEEMRKTN--PELIEPELFVVLMRRFASANMVKKAVE 188
Query: 102 MFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMC 161
+ EM + GL PD + + ++ C G + A + ++ + T L+ C
Sbjct: 189 VLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMR-EKFPPNLRYFTSLLYGWC 247
Query: 162 KKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFF 221
++G + EA+E+ QM++ G P V F L++G AGK+ +A+ L M
Sbjct: 248 REGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMR--------- 298
Query: 222 RLAQGSDHVSDSVSLQKKVEHMCEAGQTLN-AYKLLTQLADSGVVPDIKTYNILINSFCK 280
+G + + ++ ++ +C + ++ A ++ ++ G DI TY LI+ FCK
Sbjct: 299 --KRGFEPNVNCYTVL--IQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCK 354
Query: 281 AGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAV 340
G ++ + + D++ KG+ P VTY ++ + E+ E+ ++ + M + C P +
Sbjct: 355 WGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLI 414
Query: 341 YKALMTWLCRGKKISLAFSLYLE 363
Y ++ C+ ++ A L+ E
Sbjct: 415 YNVVIRLACKLGEVKEAVRLWNE 437
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 164/354 (46%), Gaps = 25/354 (7%)
Query: 154 TILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEI 213
+L+ MV++A E+ ++M K G P F L++ LCK G + EA +F M
Sbjct: 171 VVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMRE 230
Query: 214 GKSPSL--FFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTY 271
P+L F L G C G+ + A ++L Q+ ++G+ PDI +
Sbjct: 231 KFPPNLRYFTSLLYG----------------WCREGKLMEAKEVLVQMKEAGLEPDIVVF 274
Query: 272 NILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVE-REEDAFKIRDHML 330
L++ + AG M A+ L D++ +G P+ Y LI L R E R ++A ++ M
Sbjct: 275 TNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEME 334
Query: 331 KHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKS--LPGRDNDSINALEEYFMKGEV 388
++ CE Y AL++ C+ I +S+ + K +P + + + + K +
Sbjct: 335 RYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVT-YMQIMVAHEKKEQF 393
Query: 389 ERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHL 448
E + + ++ R +L Y++++ C+ +V EA+ +++ ++ ++ + V +
Sbjct: 394 EECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIM 453
Query: 449 ISGLCAKRNLYDAVVIFLYSLDKGFELGPK--ICKELLECLLVSQDKRKYAIDL 500
I+G ++ L +A F + +G P+ K LL LV DK + A D+
Sbjct: 454 INGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNN-LVRDDKLEMAKDV 506
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 130/272 (47%), Gaps = 13/272 (4%)
Query: 273 ILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKH 332
+L+ F A + A ++ ++ GL PD +G L+D L + ++A K+ + M +
Sbjct: 172 VLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDM-RE 230
Query: 333 VCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSI---NALEEYFMKGEVE 389
P+ + +L+ CR K+ A + ++ ++ G + D + N L Y G++
Sbjct: 231 KFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEA--GLEPDIVVFTNLLSGYAHAGKMA 288
Query: 390 RAIRGLLELDFRFRDFNLAPYSILLIGFCQA-KKVDEALIIFSVLDEFNININPTSCVHL 448
A + ++ R + N+ Y++L+ C+ K++DEA+ +F ++ + + + L
Sbjct: 289 DAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTAL 348
Query: 449 ISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKELLECLLVSQDKRKY--AIDLIGRMKS 506
ISG C K + D L + K + ++ ++ ++ + K ++ ++LI +MK
Sbjct: 349 ISGFC-KWGMIDKGYSVLDDMRKKGVMPSQVT--YMQIMVAHEKKEQFEECLELIEKMKR 405
Query: 507 RGYRLHKYQYRQTISLLQQLQEGK-AVKLFSE 537
RG Y I L +L E K AV+L++E
Sbjct: 406 RGCHPDLLIYNVVIRLACKLGEVKEAVRLWNE 437
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 151/335 (45%), Gaps = 26/335 (7%)
Query: 41 RGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAV 100
R +RL Y++ I G ++RY++A +Y M K + PD + AI++ L GR + V
Sbjct: 271 RDVRL--YNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEV 328
Query: 101 -KMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICE 159
++F +M ++G+ + ++K FCD G + A + E+ +T + L+
Sbjct: 329 WEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDA 388
Query: 160 MCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKME-IGKSP- 217
K + E + +F +M G PSA T+N L++ + + D L +ME +G P
Sbjct: 389 YNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPN 448
Query: 218 --------SLFFRLAQGSDHVSDSVSLQKKV-----EHMCEA--------GQTLNAYKLL 256
S + R + SD +D+ KKV H A G AY
Sbjct: 449 VKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASF 508
Query: 257 TQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRV 316
++ G+ P ++TY ++++F ++G+ +++K + + + +TY TL+DG +
Sbjct: 509 EEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQ 568
Query: 317 EREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRG 351
+A + K +PS Y LM RG
Sbjct: 569 GLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARG 603
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 144/333 (43%), Gaps = 14/333 (4%)
Query: 13 FNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMI 72
F L+ FC +G EEA+ + +E+ G Y++L+D + K+ E L+ M
Sbjct: 347 FGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMR 406
Query: 73 KGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQL- 131
G+ P Y I++ + + + EM GL P+ Y +I + ++
Sbjct: 407 DKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMS 466
Query: 132 DHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNAL 191
D A + + + ++T LI G +A F +M K G PS T+ ++
Sbjct: 467 DMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSV 526
Query: 192 INGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLN 251
++ ++G D L MEI K L R ++ + L + + G +
Sbjct: 527 LDAFRRSG--DTGKL----MEIWK---LMLREKIKGTRITYNTLL----DGFAKQGLYIE 573
Query: 252 AYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLID 311
A ++++ + G+ P + TYN+L+N++ + G +L K++ L PDS+TY T+I
Sbjct: 574 ARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIY 633
Query: 312 GLYRVEREEDAFKIRDHMLKHVCEPSFAVYKAL 344
RV + AF M+K P Y+ L
Sbjct: 634 AFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKL 666
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 141/312 (45%), Gaps = 17/312 (5%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
F+ F ++ + + EA + G + L+ + N A
Sbjct: 134 FEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQ 193
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
+G+ GI+P Y+I++RG + A K+F EM++R + D YNA++
Sbjct: 194 EFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDAL 253
Query: 126 CDIGQLDHARSLHVEISGHDGLH-DTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPS 184
C G +D + E+ G+ GL D + I I C G V A ++ ++M++ P+
Sbjct: 254 CKSGDVDGGYKMFQEM-GNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPN 312
Query: 185 AVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHM 243
TFN +I LCK K+D+A+LL +M + G +P D+ + + +
Sbjct: 313 VYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANP--------------DTWTYNSIMAYH 358
Query: 244 CEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDS 303
C+ + A KLL+++ + +PD TYN+++ + G + A ++++ + + P
Sbjct: 359 CDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTV 418
Query: 304 VTYGTLIDGLYR 315
TY +I GL R
Sbjct: 419 ATYTVMIHGLVR 430
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 150/350 (42%), Gaps = 24/350 (6%)
Query: 162 KKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKME---IGKSPS 218
+ + EA FN+M + G P + L++ LC ++ A F K + I S
Sbjct: 150 RANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAK 209
Query: 219 LFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSF 278
+ L +G + D+ +K + M E V D+ YN L+++
Sbjct: 210 TYSILVRGWARIRDASGARKVFDEMLE----------------RNCVVDLLAYNALLDAL 253
Query: 279 CKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSF 338
CK+G+++G +K+F+++ GL PD+ ++ I A+K+ D M ++ P+
Sbjct: 254 CKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNV 313
Query: 339 AVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKG-EVERAIRGLLE 397
+ ++ LC+ +K+ A+ L E ++ D + N++ Y EV RA + L
Sbjct: 314 YTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSR 373
Query: 398 LDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKR- 456
+D + Y+++L + + D A I+ + E + +I GL K+
Sbjct: 374 MDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKG 433
Query: 457 NLYDAVVIFLYSLDKGFELGP-KICKELLECLLVSQDKRKYAIDLIGRMK 505
L +A F +D+G + P E+L LV + L G+M+
Sbjct: 434 KLEEACRYFEMMIDEG--IPPYSTTVEMLRNRLVGWGQMDVVDVLAGKME 481
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 166/357 (46%), Gaps = 20/357 (5%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
+ T+N ++NGFCK G+L+ A + + + G Y +L+D + +A +EA L
Sbjct: 290 NAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLC 349
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
M G++ + ++Y ++ L EG + A+ + +M + + D +++G C
Sbjct: 350 DEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRN 409
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
G + A +IS + D H L+ + + A ++ M G A++F
Sbjct: 410 GYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISF 469
Query: 189 NALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFR-----------LAQGSDHVSDSVSL 236
LI+G K GKL+ A ++ M ++ K+ +L +A ++ V +++ +
Sbjct: 470 GTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEI 529
Query: 237 QKKVEHMC------EAGQTLNAYKLLTQL--ADSGVVPDIKTYNILINSFCKAGNMNGAF 288
+ V + + G A +L+++ D + T+NI+IN CK G+ A
Sbjct: 530 KDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAK 589
Query: 289 KLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALM 345
++ K + +G+ PDS+TYGTLI + +E ++ D+++ P +Y +++
Sbjct: 590 EVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIV 646
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/458 (22%), Positives = 210/458 (45%), Gaps = 27/458 (5%)
Query: 45 LSGYSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFA 104
++ ++ +I F K + EA S++ RM+K G+ P+V+ + +M+ G G + A+++
Sbjct: 218 VNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLG 277
Query: 105 EM-IQRG--LLPDAHCYNAIIKGFCDIGQLDHARSLHVEI--SGHDGLHDTCTHTILICE 159
+M + G + P+A YN++I GFC G+LD A + ++ SG D + T+ L+
Sbjct: 278 KMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDC--NERTYGALVDA 335
Query: 160 MCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSL 219
+ G EA + ++M G + V +N+++ L G ++ A + M
Sbjct: 336 YGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDM-------- 387
Query: 220 FFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFC 279
+ D + V +C G A + Q+++ +V DI +N L++ F
Sbjct: 388 -----NSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFV 442
Query: 280 KAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFA 339
+ + A ++ + ++GLS D++++GTLIDG + + E A +I D M+K +
Sbjct: 443 RDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLV 502
Query: 340 VYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINA-LEEYFMKGEVERA--IRGLL 396
+Y +++ L + A ++ + ++ +D + N L E G VE A I +
Sbjct: 503 IYNSIVNGLSKRGMAGAAEAV----VNAMEIKDIVTYNTLLNESLKTGNVEEADDILSKM 558
Query: 397 ELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKR 456
+ + +L ++I++ C+ ++A + + E + + + LI+ R
Sbjct: 559 QKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHR 618
Query: 457 NLYDAVVIFLYSLDKGFELGPKICKELLECLLVSQDKR 494
+ V + Y + +G I ++ LL ++ R
Sbjct: 619 SQEKVVELHDYLILQGVTPHEHIYLSIVRPLLDRENGR 656
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 175/389 (44%), Gaps = 16/389 (4%)
Query: 75 GILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHA 134
G PDV + ++R + G A ++ + G H N + ++ ++D
Sbjct: 145 GSSPDV--FDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRF 202
Query: 135 RSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALING 194
++ E+ + + T ++I CK+ + EA +F +M K G +P+ V+FN +I+G
Sbjct: 203 WKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDG 262
Query: 195 LCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYK 254
CK G + A L KM + G+ ++V+ + C+AG+ A +
Sbjct: 263 ACKTGDMRFALQLLGKMG----------MMSGNFVSPNAVTYNSVINGFCKAGRLDLAER 312
Query: 255 LLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLY 314
+ + SGV + +TY L++++ +AG+ + A +L ++ KGL ++V Y +++ L+
Sbjct: 313 IRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLF 372
Query: 315 RVEREEDAFKI-RDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDN 373
E A + RD K++ F ++ LCR + A + + D
Sbjct: 373 MEGDIEGAMSVLRDMNSKNMQIDRFT-QAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDI 431
Query: 374 DSINALEEYFMKG-EVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSV 432
N L +F++ ++ A + L + + + + L+ G+ + K++ AL I+
Sbjct: 432 VCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDG 491
Query: 433 LDEFNININPTSCVHLISGLCAKRNLYDA 461
+ + N N +++GL +KR + A
Sbjct: 492 MIKMNKTSNLVIYNSIVNGL-SKRGMAGA 519
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 132/315 (41%), Gaps = 54/315 (17%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M + Q D T +++ G C+ G ++EAV R + + +++L+ F + ++
Sbjct: 387 MNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKK 446
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
A + G M+ G+ D I + ++ G EG++ A++++ MI+ + YN+
Sbjct: 447 LACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNS 506
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
I+ G G A ++ + + D T+ L+ E K G V EA ++ ++M+K
Sbjct: 507 IVNGLSKRGMAGAAEAVVNAME----IKDIVTYNTLLNESLKTGNVEEADDILSKMQKQD 562
Query: 181 CFPSA--VTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQK 238
S VTFN +IN LCK G ++A
Sbjct: 563 GEKSVSLVTFNIMINHLCKFGSYEKAK--------------------------------- 589
Query: 239 KVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKG 298
++L + + GVVPD TY LI SF K + +L L L+G
Sbjct: 590 ---------------EVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQG 634
Query: 299 LSPDSVTYGTLIDGL 313
++P Y +++ L
Sbjct: 635 VTPHEHIYLSIVRPL 649
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/421 (25%), Positives = 174/421 (41%), Gaps = 94/421 (22%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEA---- 64
D T+N+L++G CK+G ++EA+ L++ +E++G + Y+ LIDGF A R +EA
Sbjct: 214 DRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQL 273
Query: 65 -------------------HSLY-------------GRMIKGGILPDVILYAIMLRGLSN 92
H ++ G M K L V Y +L LSN
Sbjct: 274 EMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVG-YDAVLYCLSN 332
Query: 93 EGRVGEAVKMFAEMIQRGLLPDAHCYNA----------------IIKGFCDIG------- 129
E + ++ +RG +PD+ +NA I GF G
Sbjct: 333 NSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNG 392
Query: 130 ------QLDHARSL-----HVEISGHDGLHDTC-THTILICEMCKKGMVREAQEMFNQME 177
L +A+ +++ G DGL + ++ +I +CK + A +M+
Sbjct: 393 YLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQ 452
Query: 178 KLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEI-GKSP-----SLFFRLAQGSDHVS 231
G P+ VTFN ++G G + + H + K+ + G P SL + +
Sbjct: 453 DRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIK 512
Query: 232 DSVSLQKK----------------VEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILI 275
D+ K+ + C G T + KL ++ ++G+ PD+ YN I
Sbjct: 513 DAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATI 572
Query: 276 NSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCE 335
SFCK + A +L K + GL PD+ TY TLI L RE +A ++ + +H C
Sbjct: 573 QSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCV 632
Query: 336 P 336
P
Sbjct: 633 P 633
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 133/303 (43%), Gaps = 15/303 (4%)
Query: 4 RRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNE 63
R + D +TFN ++ K L E + G +GY L+ A+R++E
Sbjct: 349 RGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSE 408
Query: 64 AHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIK 123
+M G+L V Y ++ L R+ A EM RG+ P+ +N +
Sbjct: 409 GDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLS 468
Query: 124 GFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFP 183
G+ G + + ++ H D T +++I +C+ +++A + F +M + G P
Sbjct: 469 GYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEP 528
Query: 184 SAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEH 242
+ +T+N LI C G D + LF KM E G SP L+ + ++
Sbjct: 529 NEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLY--------------AYNATIQS 574
Query: 243 MCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPD 302
C+ + A +LL + G+ PD TY+ LI + ++G + A ++F ++ G PD
Sbjct: 575 FCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPD 634
Query: 303 SVT 305
S T
Sbjct: 635 SYT 637
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 99/488 (20%), Positives = 184/488 (37%), Gaps = 62/488 (12%)
Query: 1 MWMRRFQ----RDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFF 56
+W+ F +D + +VL N ++G L ++ LL+ + G I LI +
Sbjct: 97 LWVSNFDPVYAKDQSLKSVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWG 156
Query: 57 KARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAH 116
+ + ++ ++ G+ P LY ++ L + A F +M G PD
Sbjct: 157 RLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRF 216
Query: 117 CYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQM 176
YN +I G C G +D A L ++ + T+TILI G V EA + M
Sbjct: 217 TYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMM 276
Query: 177 EKLGCFPSAVTFNALINGL------CKAGKL----------------DEAHLLFYKMEIG 214
P+ T ++G+ CKA ++ D +
Sbjct: 277 RVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMA 336
Query: 215 KSPSLFFRLAQGSDHVSDSVSLQKK----------------------------------- 239
K F R ++ DS +
Sbjct: 337 KETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVL 396
Query: 240 VEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGL 299
V+ + A + + L Q+ G++ + +YN +I+ CKA + A ++Q +G+
Sbjct: 397 VQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGI 456
Query: 300 SPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFS 359
SP+ VT+ T + G + + + +L H +P + ++ LCR K+I AF
Sbjct: 457 SPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFD 516
Query: 360 LYLEYLKSLPGRDNDSINAL-EEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFC 418
+ E L+ + + N L G+ +R+++ ++ +L Y+ + FC
Sbjct: 517 CFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFC 576
Query: 419 QAKKVDEA 426
+ +KV +A
Sbjct: 577 KMRKVKKA 584
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 87/205 (42%), Gaps = 36/205 (17%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R +L TFN L+G+ +G +++ +L L G + +S +I+ +A+
Sbjct: 451 MQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKE 510
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCY-- 118
+A + M++ GI P+ I Y I++R + G +VK+FA+M + GL PD + Y
Sbjct: 511 IKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNA 570
Query: 119 ---------------------------------NAIIKGFCDIGQLDHARSLHVEISGHD 145
+ +IK + G+ AR + I H
Sbjct: 571 TIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHG 630
Query: 146 GLHDTCTHTIL-ICEMCKKGMVREA 169
+ D+ T ++ ++ K G+ RE
Sbjct: 631 CVPDSYTKRLVEELDLRKSGLSRET 655
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 165/383 (43%), Gaps = 32/383 (8%)
Query: 5 RFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEA 64
R DL N +L + + + V L + + + R G S+ + A R ++
Sbjct: 80 RIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFR-PGRSTFLILLSHACRAPDS 138
Query: 65 -----HSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYN 119
H + M+ G+ PD + I +R L GRV EA + E+ ++ PD + YN
Sbjct: 139 SISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYN 198
Query: 120 AIIKGFCDIGQLDHARSLHVEI-SGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEK 178
++K C L E+ D D + TILI +C +REA + +++
Sbjct: 199 FLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGN 258
Query: 179 LGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSP------SLFFRLAQG----- 226
G P +N ++ G C K EA ++ KM E G P +L F L++
Sbjct: 259 AGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEE 318
Query: 227 ----------SDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILIN 276
+ + D+ + + MC G++L A LL ++ G P+ TYN L++
Sbjct: 319 ARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLH 378
Query: 277 SFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEP 336
CKA M+ +L++ ++ G+ +S Y TL+ L + + +A+++ D+ +
Sbjct: 379 GLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLS 438
Query: 337 SFAVYKALMT---WLCRGKKISL 356
+ Y L T WL + K+ L
Sbjct: 439 DASAYSTLETTLKWLKKAKEQGL 461
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 184/422 (43%), Gaps = 55/422 (13%)
Query: 56 FKARRYNEAHSLYGRMIKGGILP-DVILYAIMLRGLSNEGRVGEAVKMFAEMI--QRGLL 112
FK+ ++A SL+ + +P D+ + +L+ + V + VK+F ++ Q
Sbjct: 60 FKSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFR 119
Query: 113 PDAHCYNAIIKGFC---DIGQLDHARSLHVEISGHDGLH-DTCTHTILICEMCKKGMVRE 168
P + ++ C D + R L++ + ++GL D T I + +C+ G V E
Sbjct: 120 PGRSTFLILLSHACRAPDSSISNVHRVLNLMV--NNGLEPDQVTTDIAVRSLCETGRVDE 177
Query: 169 AQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSD 228
A+++ ++ + P T+N L+ LCK L H+++ ++ + D
Sbjct: 178 AKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDL---HVVYEFVD---------EMRDDFD 225
Query: 229 HVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAF 288
D VS ++++C + A L+++L ++G PD YN ++ FC + A
Sbjct: 226 VKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAV 285
Query: 289 KLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWL 348
++K ++ +G+ PD +TY TLI GL + R E+A M+ EP A Y +LM +
Sbjct: 286 GVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGM 345
Query: 349 CRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLA 408
CR KGE A+ L E++ R N
Sbjct: 346 CR----------------------------------KGESLGALSLLEEMEARGCAPNDC 371
Query: 409 PYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYS 468
Y+ LL G C+A+ +D+ + ++ ++ + + L+ L + +A +F Y+
Sbjct: 372 TYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYA 431
Query: 469 LD 470
+D
Sbjct: 432 VD 433
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 153/359 (42%), Gaps = 23/359 (6%)
Query: 16 LLNGFCKQGKLEEAVSLLRLLERDGR-GIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKG 74
L N F K L +A SL + R + L ++S++ + N+ L+ ++K
Sbjct: 56 LRNPF-KSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKS 114
Query: 75 --GILPDVILYAIMLRGL--SNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQ 130
P + I+L + + + ++ M+ GL PD + ++ C+ G+
Sbjct: 115 QPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGR 174
Query: 131 LDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQM-EKLGCFPSAVTFN 189
+D A+ L E++ DT T+ L+ +CK + E ++M + P V+F
Sbjct: 175 VDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFT 234
Query: 190 ALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQ 248
LI+ +C + L EA L K+ G P F ++ K + + +
Sbjct: 235 ILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLY-----------NTIMKGFCTLSKGSE 283
Query: 249 TLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGT 308
+ YK ++ + GV PD TYN LI KAG + A K + G PD+ TY +
Sbjct: 284 AVGVYK---KMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTS 340
Query: 309 LIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKS 367
L++G+ R A + + M C P+ Y L+ LC+ + + LY E +KS
Sbjct: 341 LMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELY-EMMKS 398
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 86/398 (21%), Positives = 154/398 (38%), Gaps = 70/398 (17%)
Query: 87 LRGLSNEGRVGEAVKMFAEMIQRGLLP-DAHCYNAIIKGFCDIGQLDHARSL--HVEISG 143
LR + +A +F + +P D +N++++ + I ++ L H+ S
Sbjct: 56 LRNPFKSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQ 115
Query: 144 HDGLHDTCTHTILICEMCKK--GMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKL 201
+ T IL+ C+ + + N M G P VT + + LC+ G++
Sbjct: 116 PNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRV 175
Query: 202 DEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLAD 261
DEA L ++ SP D+ + ++H+C+ Y+ + ++ D
Sbjct: 176 DEAKDLMKELTEKHSPP-------------DTYTYNFLLKHLCKCKDLHVVYEFVDEMRD 222
Query: 262 S-GVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREE 320
V PD+ ++ ILI++ C + N+ A L L G PD Y T++ G + +
Sbjct: 223 DFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGS 282
Query: 321 DAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALE 380
+A + M + EP Y L+ L + ++ A +YL+ + G + D+
Sbjct: 283 EAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEA-RMYLKTMVDA-GYEPDT----- 335
Query: 381 EYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNI-N 439
A Y+ L+ G C+ E+L S+L+E
Sbjct: 336 ---------------------------ATYTSLMNGMCRK---GESLGALSLLEEMEARG 365
Query: 440 INPTSCVH--LISGLCAKRNLYDAVVIFLYSLDKGFEL 475
P C + L+ GLC R +DKG EL
Sbjct: 366 CAPNDCTYNTLLHGLCKAR-----------LMDKGMEL 392
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 164/377 (43%), Gaps = 40/377 (10%)
Query: 8 RDLATFNVLLNGFCKQGKLEEAVSLLRLL------------ERDGRGIRLSGYSSLIDGF 55
R+ +F++ L+ FC +G + V + +L ER G+ +RL + +
Sbjct: 172 RNFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCV--- 228
Query: 56 FKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDA 115
+EA + G MI GI V ++++++ G G +AV +F +MIQ G P+
Sbjct: 229 ------SEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNL 282
Query: 116 HCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQ 175
Y ++IKGF D+G +D A ++ ++ D ++I + G EA+++F
Sbjct: 283 VTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTS 342
Query: 176 MEKLGCFPSAVTFNALINGLCKAGKLD----------------EAHLL---FYKMEIGKS 216
+EK P TF ++++ LC +GK D +LL F K+
Sbjct: 343 LEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSY 402
Query: 217 PSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILIN 276
+ D D + + +C G A K+ + D ++ +I+
Sbjct: 403 ALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIID 462
Query: 277 SFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEP 336
S + G N A LFK L+ D V+Y I GL R +R E+A+ + M + P
Sbjct: 463 SLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYP 522
Query: 337 SFAVYKALMTWLCRGKK 353
+ Y+ +++ LC+ K+
Sbjct: 523 NRRTYRTIISGLCKEKE 539
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 143/326 (43%), Gaps = 45/326 (13%)
Query: 12 TFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRM 71
+++L++GF + G+ ++AV L + + G L Y+SLI GF +EA ++ ++
Sbjct: 249 VWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKV 308
Query: 72 IKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQL 131
G+ PD++L +M+ + GR EA K+F + +R L+PD + + +I+ C G+
Sbjct: 309 QSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKF 368
Query: 132 D--------------------------------HARSLHVEISGHDGLHDTCTHTILICE 159
D +A + +S D D T+T+ +
Sbjct: 369 DLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSA 428
Query: 160 MCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSL 219
+C+ G R A +M+ + K A +A+I+ L + GK + A LF + + K P
Sbjct: 429 LCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPL- 487
Query: 220 FFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFC 279
D VS ++ + A + AY L + + G+ P+ +TY +I+ C
Sbjct: 488 ------------DVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLC 535
Query: 280 KAGNMNGAFKLFKDLQLKGLSPDSVT 305
K K+ ++ +G+ D T
Sbjct: 536 KEKETEKVRKILRECIQEGVELDPNT 561
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 103/489 (21%), Positives = 192/489 (39%), Gaps = 56/489 (11%)
Query: 28 EAVSLLRLLER---DGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKGGILPDV---- 80
E S+ R++ER G I+ + L++ F++ Y++A +Y M G +P+
Sbjct: 88 EYYSIDRIIERLKISGCEIKPRVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMN 147
Query: 81 ---------------------------ILYAIMLRGLSNEGRVGEAVKM---FAEMIQRG 110
+ I L + G G+ V + MI G
Sbjct: 148 MMMDVNFKLNVVNGALEIFEGIRFRNFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEG 207
Query: 111 LLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTC-THTILICEMCKKGMVREA 169
P+ + I++ C G + A + V + G+ + ++L+ + G ++A
Sbjct: 208 FYPNRERFGQILRLCCRTGCVSEAFQV-VGLMICSGISVSVNVWSMLVSGFFRSGEPQKA 266
Query: 170 QEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDH 229
++FN+M ++GC P+ VT+ +LI G G +DEA + K+ Q
Sbjct: 267 VDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKV-------------QSEGL 313
Query: 230 VSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFK 289
D V + G+ A K+ T L +VPD T+ +++S C +G + +
Sbjct: 314 APDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPR 373
Query: 290 LFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLC 349
+ + G D VT L + ++ A K+ M Y ++ LC
Sbjct: 374 ITHGI---GTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALC 430
Query: 350 RGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMK-GEVERAIRGLLELDFRFRDFNLA 408
RG A +Y +K D +A+ + ++ G+ A+ ++
Sbjct: 431 RGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVV 490
Query: 409 PYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYS 468
Y++ + G +AK+++EA + + E I N + +ISGLC ++ I
Sbjct: 491 SYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILREC 550
Query: 469 LDKGFELGP 477
+ +G EL P
Sbjct: 551 IQEGVELDP 559
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 67/137 (48%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M + F D T+ V L+ C+ G A+ + +++ ++ + + +S++ID + +
Sbjct: 410 MSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGK 469
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
YN A L+ R I DV+ Y + ++GL R+ EA + +M + G+ P+ Y
Sbjct: 470 YNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRT 529
Query: 121 IIKGFCDIGQLDHARSL 137
II G C + + R +
Sbjct: 530 IISGLCKEKETEKVRKI 546
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 90/443 (20%), Positives = 180/443 (40%), Gaps = 31/443 (6%)
Query: 98 EAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILI 157
+A++++ M G +P+ N ++ + ++ A +EI + + I +
Sbjct: 126 KAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGA----LEIFEGIRFRNFFSFDIAL 181
Query: 158 CEMCKKGMVRE---AQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIG 214
C +G + + + +M G +P+ F ++ C+ G + EA + M
Sbjct: 182 SHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLM--- 238
Query: 215 KSPSLFFRLAQGSDHVSDSVSLQKK-VEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNI 273
+ G +S SV++ V +G+ A L ++ G P++ TY
Sbjct: 239 --------ICSG---ISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTS 287
Query: 274 LINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHV 333
LI F G ++ AF + +Q +GL+PD V +I R+ R E+A K+ + K
Sbjct: 288 LIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRK 347
Query: 334 CEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSI--NALEEYFMK-GEVER 390
P + ++++ LC K L + + G D D + N L F K G
Sbjct: 348 LVPDQYTFASILSSLCLSGKFDL-----VPRITHGIGTDFDLVTGNLLSNCFSKIGYNSY 402
Query: 391 AIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLIS 450
A++ L + ++ + Y++ L C+ A+ ++ ++ + +++ +I
Sbjct: 403 ALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIID 462
Query: 451 GLCAKRNLYDAVVIFLYSLDKGFELGPKICKELLECLLVSQDKRKYAIDLIGRMKSRGYR 510
L AV +F + + + L + + LV + + A L MK G
Sbjct: 463 SLIELGKYNTAVHLFKRCILEKYPLDV-VSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIY 521
Query: 511 LHKYQYRQTISLLQQLQEGKAVK 533
++ YR IS L + +E + V+
Sbjct: 522 PNRRTYRTIISGLCKEKETEKVR 544
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 143/328 (43%), Gaps = 15/328 (4%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
+L FN LL+ CK + +A + + RD YS L++G+ K +A ++
Sbjct: 202 NLVAFNGLLSALCKSKNVRKAQEVFENM-RDRFTPDSKTYSILLEGWGKEPNLPKAREVF 260
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
MI G PD++ Y+IM+ L GRV EA+ + M P Y+ ++ +
Sbjct: 261 REMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTE 320
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
+L+ A +E+ D LI CK ++ + +M+ G P++ +
Sbjct: 321 NRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSC 380
Query: 189 NALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQ 248
N ++ L + G+ DEA +F KM P D+ + ++ CE +
Sbjct: 381 NIILRHLIERGEKDEAFDVFRKMIKVCEP--------------DADTYTMVIKMFCEKKE 426
Query: 249 TLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGT 308
A K+ + GV P + T+++LIN C+ A L +++ G+ P VT+G
Sbjct: 427 METADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGR 486
Query: 309 LIDGLYRVEREEDAFKIRDHMLKHVCEP 336
L L + ERE+ + + M V EP
Sbjct: 487 LRQLLIKEEREDVLKFLNEKMNVLVNEP 514
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 113/258 (43%), Gaps = 37/258 (14%)
Query: 5 RFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEA 64
RF D T+++LL G+ K+ L +A + R + G + YS ++D KA R +EA
Sbjct: 232 RFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEA 291
Query: 65 HSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKG 124
+ M P +Y++++ E R+ EAV F EM + G+ D +N++I
Sbjct: 292 LGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGA 351
Query: 125 FCDIGQLDHA-RSLH---------------------VEISGHDGLHDTCTHTILICE--- 159
FC ++ + R L +E D D I +CE
Sbjct: 352 FCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCEPDA 411
Query: 160 ---------MCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYK 210
C+K + A +++ M K G FPS TF+ LINGLC+ +A +L +
Sbjct: 412 DTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEE 471
Query: 211 M-EIGKSPS--LFFRLAQ 225
M E+G PS F RL Q
Sbjct: 472 MIEMGIRPSGVTFGRLRQ 489
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 123/287 (42%), Gaps = 16/287 (5%)
Query: 187 TFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEA 246
TF ++ +A K+DEA F ME P + V+ + +C++
Sbjct: 170 TFCIVMRKYARAQKVDEAIYAFNVMEKYDLPP-------------NLVAFNGLLSALCKS 216
Query: 247 GQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTY 306
A ++ + D PD KTY+IL+ + K N+ A ++F+++ G PD VTY
Sbjct: 217 KNVRKAQEVFENMRDR-FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTY 275
Query: 307 GTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLK 366
++D L + R ++A I M +C+P+ +Y L+ ++ A +LE +
Sbjct: 276 SIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMER 335
Query: 367 SLPGRDNDSINALEEYFMKG-EVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDE 425
S D N+L F K ++ R L E+ + N +I+L + + DE
Sbjct: 336 SGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDE 395
Query: 426 ALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKG 472
A +F + + + + +I C K+ + A ++ Y KG
Sbjct: 396 AFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKG 441
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 160/355 (45%), Gaps = 21/355 (5%)
Query: 13 FNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMI 72
F +L+ + K G A +L +L + G + Y++L++ + + + N A +++ RM
Sbjct: 149 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 208
Query: 73 KGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMI---QRGLLPDAHCYNAIIKGFCDIG 129
G P I Y I+L+ + EA ++F ++ + L PD Y+ +I + G
Sbjct: 209 SSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAG 268
Query: 130 QLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFN 189
+ AR + + G T T+ L M + +E ++++QM++ P V++
Sbjct: 269 NYEKARKVFSSMVGKGVPQSTVTYNSL---MSFETSYKEVSKIYDQMQRSDIQPDVVSYA 325
Query: 190 ALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQ 248
LI +A + +EA +F +M + G P+ + + + D+ ++ VE
Sbjct: 326 LLIKAYGRARREEEALSVFEEMLDAGVRPT-----HKAYNILLDAFAISGMVEQ------ 374
Query: 249 TLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGT 308
A + + + PD+ +Y +++++ A +M GA K FK +++ G P+ VTYGT
Sbjct: 375 ---AKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGT 431
Query: 309 LIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLE 363
LI G + E ++ + M + + + +M R K A Y E
Sbjct: 432 LIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKE 486
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 120/268 (44%), Gaps = 16/268 (5%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D +++++ + K G E+A + + G Y+SL+ F+ Y E +Y
Sbjct: 253 DQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS--FETS-YKEVSKIY 309
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
+M + I PDV+ YA++++ R EA+ +F EM+ G+ P YN ++ F
Sbjct: 310 DQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAIS 369
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
G ++ A+++ + D ++T ++ + A++ F +++ G P+ VT+
Sbjct: 370 GMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTY 429
Query: 189 NALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQ 248
LI G KA +++ ++ KM RL+ + + ++ G
Sbjct: 430 GTLIKGYAKANDVEKMMEVYEKM----------RLSGIKANQTILTTIMDASGRCKNFGS 479
Query: 249 TLNAYKLLTQLADSGVVPDIKTYNILIN 276
L YK ++ GV PD K N+L++
Sbjct: 480 ALGWYK---EMESCGVPPDQKAKNVLLS 504
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 84/203 (41%), Gaps = 4/203 (1%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
Q D+ ++ +L+ + + + EEA+S+ + G Y+ L+D F + +A +
Sbjct: 318 QPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKT 377
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
++ M + I PD+ Y ML N + A K F + G P+ Y +IKG+
Sbjct: 378 VFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYA 437
Query: 127 DIGQLDHARSLH--VEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPS 184
++ ++ + +SG T + CK A + +ME G P
Sbjct: 438 KANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKN--FGSALGWYKEMESCGVPPD 495
Query: 185 AVTFNALINGLCKAGKLDEAHLL 207
N L++ +L+EA L
Sbjct: 496 QKAKNVLLSLASTQDELEEAKEL 518
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 139/304 (45%), Gaps = 12/304 (3%)
Query: 10 LATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYS--SLIDGFFKARRYNEAHSL 67
+A+ NVL+ C+ +A L LE RG Y+ +LI G + R +EA L
Sbjct: 156 VASLNVLIKALCRNDGTVDA-GLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKL 214
Query: 68 YGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCD 127
+ M++ P V+ Y ++ GL V EA++ EM +G+ P+ Y++++ G C
Sbjct: 215 FTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCK 274
Query: 128 IGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVT 187
G+ A L + + T+T LI +CK+ ++EA E+ ++M G P A
Sbjct: 275 DGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGL 334
Query: 188 FNALINGLCKAGKLDEAHLLFYKMEIGK-SPSLFFRLAQGSDHVSDSVSLQKKVEHMCEA 246
+ +I+G C K EA +M +G +P+ RL + HV S + V +C A
Sbjct: 335 YGKVISGFCAISKFREAANFLDEMILGGITPN---RLTW-NIHVKTS---NEVVRGLC-A 386
Query: 247 GQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTY 306
A+ L + G+ +++T L+ CK G A +L ++ G P T+
Sbjct: 387 NYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTW 446
Query: 307 GTLI 310
LI
Sbjct: 447 KLLI 450
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 130/287 (45%), Gaps = 23/287 (8%)
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
++ M K G PD Y ++ GL GR+ EA K+F EM+++ P Y ++I G C
Sbjct: 179 IFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLC 238
Query: 127 DIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAV 186
+D A E+ + T++ L+ +CK G +A E+F M GC P+ V
Sbjct: 239 GSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMV 298
Query: 187 TFNALINGLCKAGKLDEAHLLFYKMEI-GKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCE 245
T+ LI GLCK K+ EA L +M + G P D+ K + C
Sbjct: 299 TYTTLITGLCKEQKIQEAVELLDRMNLQGLKP--------------DAGLYGKVISGFCA 344
Query: 246 AGQTLNAYKLLTQLADSGVVPD-------IKTYNILINSFCKAGNMNGAFKLFKDLQLKG 298
+ A L ++ G+ P+ +KT N ++ C A + AF L+ ++ +G
Sbjct: 345 ISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC-ANYPSRAFTLYLSMRSRG 403
Query: 299 LSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALM 345
+S + T +L+ L + + A ++ D ++ C PS +K L+
Sbjct: 404 ISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 148/308 (48%), Gaps = 20/308 (6%)
Query: 46 SGYSSLIDGFFKARRYNEAHSLYGRM-IKGGILPDVILYAIMLRGLSNEGRVGEAVKMFA 104
S + ++ A ++ A L RM I+ ++ + IL +I RG R +++++F
Sbjct: 52 SSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSI-CRGYGRVHRPFDSLRVFH 110
Query: 105 EMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTH-TILICEMCKK 163
+M P Y ++ + QL+ A + + GL T +LI +C+
Sbjct: 111 KMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMR-EIGLPPTVASLNVLIKALCRN 169
Query: 164 -GMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFF 221
G V ++F +M K GC P + T+ LI+GLC+ G++DEA LF +M E +P++
Sbjct: 170 DGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTV-- 227
Query: 222 RLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKA 281
V+ + +C + A + L ++ G+ P++ TY+ L++ CK
Sbjct: 228 ------------VTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKD 275
Query: 282 GNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVY 341
G A +LF+ + +G P+ VTY TLI GL + ++ ++A ++ D M +P +Y
Sbjct: 276 GRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLY 335
Query: 342 KALMTWLC 349
+++ C
Sbjct: 336 GKVISGFC 343
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 153/341 (44%), Gaps = 43/341 (12%)
Query: 169 AQEMFNQMEKLGCFPSAVTFNALINGLCKA-GKLDEAHLLFYKMEIGKSPSLFFRLAQGS 227
A + + M ++G P+ + N LI LC+ G +D +F +M +G
Sbjct: 140 AFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMP-----------KRGC 188
Query: 228 DHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGA 287
D DS + + +C G+ A KL T++ + P + TY LIN C + N++ A
Sbjct: 189 D--PDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEA 246
Query: 288 FKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTW 347
+ ++++ KG+ P+ TY +L+DGL + R A ++ + M+ C P+ Y L+T
Sbjct: 247 MRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITG 306
Query: 348 LCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNL 407
LC+ +KI A L L+ + +L G D+ G + I G + +FR+
Sbjct: 307 LCKEQKIQEAVEL-LDRM-NLQGLKPDA----------GLYGKVISGFCAIS-KFRE--- 350
Query: 408 APYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLY 467
A +DE ++ + NI+ + ++ GLCA A ++L
Sbjct: 351 -----------AANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYP-SRAFTLYLS 398
Query: 468 SLDKGFELGPKICKELLECLLVSQDKRKYAIDLIGRMKSRG 508
+G + + + L++CL + +K A+ L+ + + G
Sbjct: 399 MRSRGISVEVETLESLVKCLCKKGEFQK-AVQLVDEIVTDG 438
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 170/387 (43%), Gaps = 66/387 (17%)
Query: 168 EAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQG 226
++ +F++M+ C PS + ++ L + +L+ A + M EIG P++
Sbjct: 104 DSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTV------- 156
Query: 227 SDHVSDSVSLQKKVEHMCEAGQTLNA-YKLLTQLADSGVVPDIKTYNILINSFCKAGNMN 285
SL ++ +C T++A K+ ++ G PD TY LI+ C+ G ++
Sbjct: 157 -------ASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRID 209
Query: 286 GAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALM 345
A KLF ++ K +P VTY +LI+GL + ++A + + M EP+ Y +LM
Sbjct: 210 EAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLM 269
Query: 346 TWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDF 405
LC +D S+ A+E + M + R R
Sbjct: 270 DGLC---------------------KDGRSLQAMELFEMM--MARGCRP----------- 295
Query: 406 NLAPYSILLIGFCQAKKVDEALIIFSVLDEFNIN-INPTSCVH--LISGLCA------KR 456
N+ Y+ L+ G C+ +K+ EA+ +LD N+ + P + ++ +ISG CA
Sbjct: 296 NMVTYTTLITGLCKEQKIQEAV---ELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAA 352
Query: 457 NLYDAVVIFLYSLDK-GFELGPKICKELLECLLVSQDKRKYAIDLIGRMKSRGYRLHKYQ 515
N D +++ + ++ + + K E++ L + R + + L M+SRG +
Sbjct: 353 NFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYL--SMRSRGISVEVET 410
Query: 516 YRQTISLLQQLQE-GKAVKLFSEDNTD 541
+ L + E KAV+L E TD
Sbjct: 411 LESLVKCLCKKGEFQKAVQLVDEIVTD 437
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 95/199 (47%), Gaps = 8/199 (4%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M + + ++ T++ L++G CK G+ +A+ L ++ G + Y++LI G K ++
Sbjct: 253 MKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQK 312
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCY-- 118
EA L RM G+ PD LY ++ G + EA EMI G+ P+ +
Sbjct: 313 IQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNI 372
Query: 119 -----NAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMF 173
N +++G C A +L++ + + T L+ +CKKG ++A ++
Sbjct: 373 HVKTSNEVVRGLC-ANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLV 431
Query: 174 NQMEKLGCFPSAVTFNALI 192
+++ GC PS T+ LI
Sbjct: 432 DEIVTDGCIPSKGTWKLLI 450
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 141/342 (41%), Gaps = 26/342 (7%)
Query: 204 AHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSG 263
+ ++ +K +PS +L + V S+++ + T +G
Sbjct: 3 SKVMMFKWSKNITPSQVIKLMRAEKDVEKSMAV----------------FDSATAEYANG 46
Query: 264 VVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAF 323
V D ++ ++ A A L ++++ ++ G RV R D+
Sbjct: 47 YVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSL 106
Query: 324 KIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYF 383
++ M C+PS Y ++ L +++LAF Y + S+N L +
Sbjct: 107 RVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKAL 166
Query: 384 MK--GEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININ 441
+ G V+ ++ LE+ R D + Y L+ G C+ ++DEA +F+ + E +
Sbjct: 167 CRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPT 226
Query: 442 PTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKELLECLLVSQDKRKY-AIDL 500
+ LI+GLC +N+ +A+ KG E L++ L +D R A++L
Sbjct: 227 VVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGL--CKDGRSLQAMEL 284
Query: 501 IGRMKSRGYRLHKYQYRQTISLL---QQLQEGKAVKLFSEDN 539
M +RG R + Y I+ L Q++QE AV+L N
Sbjct: 285 FEMMMARGCRPNMVTYTTLITGLCKEQKIQE--AVELLDRMN 324
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 160/356 (44%), Gaps = 23/356 (6%)
Query: 13 FNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMI 72
F +L+ + K G A +L +L + G + Y++L++ + + + N A +++ RM
Sbjct: 142 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 201
Query: 73 KGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMI---QRGLLPDAHCYNAIIKGFCDIG 129
G P I Y I+L+ + EA ++F ++ + L PD Y+ +I + G
Sbjct: 202 SSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAG 261
Query: 130 QLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFN 189
+ AR + + G T T+ L M + +E ++++QM++ P V++
Sbjct: 262 NYEKARKVFSSMVGKGVPQSTVTYNSL---MSFETSYKEVSKIYDQMQRSDIQPDVVSYA 318
Query: 190 ALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQK-KVEHMCEAG 247
LI +A + +EA +F +M + G P+ H + ++ L + M E
Sbjct: 319 LLIKAYGRARREEEALSVFEEMLDAGVRPT----------HKAYNILLDAFAISGMVEQA 368
Query: 248 QTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYG 307
+T+ + + PD+ +Y +++++ A +M GA K FK +++ G P+ VTYG
Sbjct: 369 KTV-----FKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYG 423
Query: 308 TLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLE 363
TLI G + E ++ + M + + + +M R K A Y E
Sbjct: 424 TLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKE 479
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 124/270 (45%), Gaps = 20/270 (7%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSG--YSSLIDGFFKARRYNEAHS 66
D +++++ + K G E+A + + G+G+ S Y+SL+ F+ Y E
Sbjct: 246 DQKMYHMMIYMYKKAGNYEKARKVFSSMV--GKGVPQSTVTYNSLMS--FETS-YKEVSK 300
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
+Y +M + I PDV+ YA++++ R EA+ +F EM+ G+ P YN ++ F
Sbjct: 301 IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFA 360
Query: 127 DIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAV 186
G ++ A+++ + D ++T ++ + A++ F +++ G P+ V
Sbjct: 361 ISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIV 420
Query: 187 TFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEA 246
T+ LI G KA +++ ++ KM RL+ + + ++
Sbjct: 421 TYGTLIKGYAKANDVEKMMEVYEKM----------RLSGIKANQTILTTIMDASGRCKNF 470
Query: 247 GQTLNAYKLLTQLADSGVVPDIKTYNILIN 276
G L YK ++ GV PD K N+L++
Sbjct: 471 GSALGWYK---EMESCGVPPDQKAKNVLLS 497
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 86/206 (41%), Gaps = 10/206 (4%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
Q D+ ++ +L+ + + + EEA+S+ + G Y+ L+D F + +A +
Sbjct: 311 QPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKT 370
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
++ M + I PD+ Y ML N + A K F + G P+ Y +IKG+
Sbjct: 371 VFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYA 430
Query: 127 DIGQLDHARSLH--VEISGHDGLHDTCTHTILICEMCKKGMVR---EAQEMFNQMEKLGC 181
++ ++ + +SG TIL M G + A + +ME G
Sbjct: 431 KANDVEKMMEVYEKMRLSGIK-----ANQTILTTIMDASGRCKNFGSALGWYKEMESCGV 485
Query: 182 FPSAVTFNALINGLCKAGKLDEAHLL 207
P N L++ +L+EA L
Sbjct: 486 PPDQKAKNVLLSLASTQDELEEAKEL 511
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 153/339 (45%), Gaps = 16/339 (4%)
Query: 10 LATFNVLLNGFCK-QGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
+ +N + G K +G EEA+ + + ++RD Y+ +I+ + KA + + LY
Sbjct: 250 VTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLY 309
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
M P++ Y ++ + EG +A ++F ++ + GL PD + YNA+++ +
Sbjct: 310 CEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRA 369
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
G A + + D ++ I++ + G+ +A+ +F +M++LG P+ +
Sbjct: 370 GYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSH 429
Query: 189 NALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAG 247
L++ KA + + + +M E G P D+ L + G
Sbjct: 430 MLLLSAYSKARDVTKCEAIVKEMSENGVEP--------------DTFVLNSMLNLYGRLG 475
Query: 248 QTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYG 307
Q K+L ++ + DI TYNILIN + KAG + +LF +L+ K PD VT+
Sbjct: 476 QFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWT 535
Query: 308 TLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMT 346
+ I R + ++ + M+ C P K L++
Sbjct: 536 SRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLS 574
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/405 (22%), Positives = 177/405 (43%), Gaps = 18/405 (4%)
Query: 73 KGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLD 132
K PDVI + +++ + + EA ++ ++++ +P Y +IK +C G ++
Sbjct: 170 KSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIE 229
Query: 133 HARSLHVEISGHDGLHDTCTHTILICE----MCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
A + VE+ H T T+ M +KG EA ++F +M++ C P+ T+
Sbjct: 230 RAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETY 289
Query: 189 NALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQ 248
N +IN KA K + L+ +M R Q ++ +L V G
Sbjct: 290 NLMINLYGKASKSYMSWKLYCEM----------RSHQCKPNICTYTAL---VNAFAREGL 336
Query: 249 TLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGT 308
A ++ QL + G+ PD+ YN L+ S+ +AG GA ++F +Q G PD +Y
Sbjct: 337 CEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNI 396
Query: 309 LIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSL 368
++D R DA + + M + P+ + L++ + + ++ ++ E ++
Sbjct: 397 MVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENG 456
Query: 369 PGRDNDSINA-LEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEAL 427
D +N+ L Y G+ + + L E++ +++ Y+IL+ + +A ++
Sbjct: 457 VEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIE 516
Query: 428 IIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKG 472
+F L E N + + I K+ + +F +D G
Sbjct: 517 ELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSG 561
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 117/277 (42%), Gaps = 15/277 (5%)
Query: 3 MRRFQ--RDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
MR Q ++ T+ L+N F ++G E+A + L+ DG + Y++L++ + +A
Sbjct: 312 MRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGY 371
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
A ++ M G PD Y IM+ G +A +F EM + G+ P +
Sbjct: 372 PYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHML 431
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
++ + + ++ E+S + DT ++ + G + +++ +ME
Sbjct: 432 LLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGP 491
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKV 240
C T+N LIN KAG L+ LF ++ + + D V+ ++
Sbjct: 492 CTADISTYNILINIYGKAGFLERIEELFVEL-------------KEKNFRPDVVTWTSRI 538
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINS 277
+ ++ ++ DSG PD T +L+++
Sbjct: 539 GAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSA 575
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 92/212 (43%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
+ D A++N++++ + + G +A ++ ++R G + + L+ + KAR + +
Sbjct: 388 EPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEA 447
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
+ M + G+ PD + ML G+ + K+ AEM D YN +I +
Sbjct: 448 IVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYG 507
Query: 127 DIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAV 186
G L+ L VE+ + D T T I +K + + E+F +M GC P
Sbjct: 508 KAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGG 567
Query: 187 TFNALINGLCKAGKLDEAHLLFYKMEIGKSPS 218
T L++ ++++ + M G + S
Sbjct: 568 TAKVLLSACSSEEQVEQVTSVLRTMHKGVTVS 599
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 157/342 (45%), Gaps = 48/342 (14%)
Query: 4 RRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNE 63
+R + T +++ CK+G+L+E V LL + + +SL+ + R E
Sbjct: 228 KRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEE 287
Query: 64 AHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIK 123
+ SL R++ ++ D I Y+I++ + EG + A K+F EM+QRG ++ Y ++
Sbjct: 288 SMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVR 347
Query: 124 GFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFP 183
+C C+KG V+EA+ + ++ME+ G P
Sbjct: 348 ---------------------------------VC--CEKGDVKEAERLLSEMEESGVSP 372
Query: 184 SAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHM 243
TFN LI G + G +E L + ++ + + L ++ V K+E++
Sbjct: 373 YDETFNCLIGGFARFG-WEEKGLEYCEVMVTRG------LMPSCSAFNEMVKSVSKIENV 425
Query: 244 CEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDS 303
A + +LT+ D G VPD TY+ LI F + +++ A KLF +++ + +SP
Sbjct: 426 NRANE------ILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGF 479
Query: 304 VTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALM 345
+ +LI GL + E K M K + EP+ +Y AL+
Sbjct: 480 EVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALI 521
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R F + + V + C++G ++EA LL +E G ++ LI GF +
Sbjct: 330 MLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGW 389
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+ M+ G++P + M++ +S V A ++ + I +G +PD H Y+
Sbjct: 390 EEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSH 449
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I+GF + +D A L E+ LI +C G V ++ M+K
Sbjct: 450 LIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRL 509
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKM 211
P+A ++ALI K G A ++ +M
Sbjct: 510 IEPNADIYDALIKAFQKIGDKTNADRVYNEM 540
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 125/274 (45%), Gaps = 14/274 (5%)
Query: 152 THTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM 211
T I+I +CK+G ++E ++ +++ C PS + +L+ + +M
Sbjct: 236 TIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLV------------FRVLEEM 283
Query: 212 EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTY 271
I +S SL RL + V D++ V + G ++A K+ ++ G + Y
Sbjct: 284 RIEESMSLLKRLLM-KNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVY 342
Query: 272 NILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLK 331
+ + C+ G++ A +L +++ G+SP T+ LI G R EE + + M+
Sbjct: 343 TVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVT 402
Query: 332 HVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKG-EVER 390
PS + + ++ + + + ++ A + + + D + + L F++G ++++
Sbjct: 403 RGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQ 462
Query: 391 AIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVD 424
A++ E+++R + L++G C KV+
Sbjct: 463 ALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVE 496
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 117/528 (22%), Positives = 220/528 (41%), Gaps = 113/528 (21%)
Query: 14 NVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLS--GYSSLIDGFFKARRYNEAHSLYGRM 71
+L+ FCK G++++A L+ +LE R IRL+ Y LI GF K R ++A L+ +M
Sbjct: 252 TILVVSFCKWGQVDKAFELIEMLEE--RDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKM 309
Query: 72 IKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHC-------------- 117
+ G+ D+ LY +++ GL + A+ ++ E+ + G+ PD
Sbjct: 310 RRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESEL 369
Query: 118 -------------------YNAIIKGFCDIGQLDHARSLHVEISGH---DG--------- 146
Y ++ +GF + A S + G+ DG
Sbjct: 370 SRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLK 429
Query: 147 ------LHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGK 200
L D+ + +I+I + K V A + + + + G P + +N +I G+CK G+
Sbjct: 430 DHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGR 489
Query: 201 LDEAHLLFYKM-EIGKSPSLFFR------LAQGSDHVSDSVSLQKK-------------- 239
+E+ L +M + G PS F LA+ D V ++ L KK
Sbjct: 490 SEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVG-ALDLLKKMRFYGFEPWIKHTT 548
Query: 240 --VEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLK 297
V+ +CE G+ ++A K L +A G + + I+ K ++ +LF+D+
Sbjct: 549 FLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICAN 608
Query: 298 GLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLA 357
G PD + Y LI L + R +A + + M+ +P+ A Y +++ C+
Sbjct: 609 GHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCK------- 661
Query: 358 FSLYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGF 417
+GE++R + ++ + ++ ++ Y+ L+ G
Sbjct: 662 ---------------------------EGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGL 694
Query: 418 CQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIF 465
C + + EA+ ++ + + N + + LI GLC +A+V F
Sbjct: 695 CASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYF 742
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 103/207 (49%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
F+ + L+ C+ G+ +A L + +G + ++ IDG K +
Sbjct: 540 FEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGL 599
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
L+ + G PDVI Y ++++ L R EA +F EM+ +GL P YN++I G+
Sbjct: 600 ELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGW 659
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
C G++D S V + + D T+T LI +C G EA +N+M+ C+P+
Sbjct: 660 CKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNR 719
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKME 212
+TF ALI GLCK G EA + F +ME
Sbjct: 720 ITFMALIQGLCKCGWSGEALVYFREME 746
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 102/436 (23%), Positives = 171/436 (39%), Gaps = 101/436 (23%)
Query: 3 MRRF--QRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDG----RGI------------- 43
MRR D+A ++VL+ G CK LE A+SL ++R G RGI
Sbjct: 309 MRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESE 368
Query: 44 --RLSG--------------YSSLIDGFFKARRYNEAHSLYGRMI--------------- 72
R++ Y SL +GF + +EA+S ++
Sbjct: 369 LSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLL 428
Query: 73 ---KGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIG 129
ILPD +I++ L +V AV + +++Q GL+P YN II+G C G
Sbjct: 429 KDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEG 488
Query: 130 QLDHARSLHVEISG-------------HDGLHDTCT----------------------HT 154
+ + + L E+ + L + C T
Sbjct: 489 RSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTT 548
Query: 155 ILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIG 214
L+ ++C+ G +A + + + G V A I+GL K +D L
Sbjct: 549 FLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLEL------- 601
Query: 215 KSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNIL 274
FR + H D ++ ++ +C+A +T+ A L ++ G+ P + TYN +
Sbjct: 602 ------FRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSM 655
Query: 275 INSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVC 334
I+ +CK G ++ + +PD +TY +LI GL R +A + M C
Sbjct: 656 IDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDC 715
Query: 335 EPSFAVYKALMTWLCR 350
P+ + AL+ LC+
Sbjct: 716 YPNRITFMALIQGLCK 731
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 127/297 (42%), Gaps = 19/297 (6%)
Query: 13 FNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYS-SLIDGFFKAR-RYNEAHSLYGR 70
+N ++ G CK+G+ EE++ LL E G+ S ++ + I G R + A L +
Sbjct: 477 YNNIIEGMCKEGRSEESLKLLG--EMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKK 534
Query: 71 MIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQ 130
M G P + +++ L GR +A K ++ G L A I G
Sbjct: 535 MRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEG 594
Query: 131 LDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNA 190
+D L +I + D + +LI +CK EA +FN+M G P+ T+N+
Sbjct: 595 VDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNS 654
Query: 191 LINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQT 249
+I+G CK G++D +M E K+P D ++ + +C +G+
Sbjct: 655 MIDGWCKEGEIDRGLSCIVRMYEDEKNP--------------DVITYTSLIHGLCASGRP 700
Query: 250 LNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTY 306
A ++ P+ T+ LI CK G A F++++ K + PDS Y
Sbjct: 701 SEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVY 757
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 151/356 (42%), Gaps = 15/356 (4%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D + ++++N K K++ AV+LL + ++G Y+++I+G K R E+ L
Sbjct: 438 DSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLL 497
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
G M G+ P + L+ A+ + +M G P ++K C+
Sbjct: 498 GEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCEN 557
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
G+ A +++G L T I + K V E+F + G P + +
Sbjct: 558 GRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAY 617
Query: 189 NALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAG 247
+ LI LCKA + EA +LF +M G P++ + ++ C+ G
Sbjct: 618 HVLIKALCKACRTMEADILFNEMVSKGLKPTV--------------ATYNSMIDGWCKEG 663
Query: 248 QTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYG 307
+ + ++ + PD+ TY LI+ C +G + A + +++ K P+ +T+
Sbjct: 664 EIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFM 723
Query: 308 TLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLE 363
LI GL + +A M + EP AVY +L++ + I+ F ++ E
Sbjct: 724 ALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFRE 779
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 183/429 (42%), Gaps = 39/429 (9%)
Query: 108 QRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVR 167
Q G D + YNA+ Q ++L V++ I + G+V
Sbjct: 99 QEGYRNDMYAYNAMASILSRARQNASLKALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVD 158
Query: 168 EAQEMFNQMEKLG-CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQG 226
EA +F+++ ++G C P+A T+N L+ + K+ L+ +++ + F
Sbjct: 159 EASSVFDRVREMGLCVPNAYTYNCLLEAISKSNS-SSVELVEARLKEMRDCGFHF----- 212
Query: 227 SDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNG 286
D +L ++ C G++ A + ++ G + D IL+ SFCK G ++
Sbjct: 213 -----DKFTLTPVLQVYCNTGKSERALSVFNEILSRGWL-DEHISTILVVSFCKWGQVDK 266
Query: 287 AFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMT 346
AF+L + L+ + + + TY LI G + R + AF++ + M + A+Y L+
Sbjct: 267 AFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIG 326
Query: 347 WLCRGKKISLAFSLYLEYLKS--LPGR-----------DNDSINALEEYFM----KGEVE 389
LC+ K + +A SLYLE +S P R + ++ + E + K V
Sbjct: 327 GLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVM 386
Query: 390 RAIRGLLELDFRFRDFNLAPYSIL--LIGFCQAKKVDEALIIFSVLDEFNININPTS-CV 446
+ L E F D YS + L+G ++ V E I +L + N I P S +
Sbjct: 387 LLYKSLFE-GFIRNDLVHEAYSFIQNLMGNYESDGVSE---IVKLLKDHNKAILPDSDSL 442
Query: 447 HLISGLCAKRNLYDAVVIFLYSL-DKGFELGPKICKELLECLLVSQDKRKYAIDLIGRMK 505
++ K N D V L+ + G GP + ++E + + + + ++ L+G MK
Sbjct: 443 SIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEG-MCKEGRSEESLKLLGEMK 501
Query: 506 SRGYRLHKY 514
G ++
Sbjct: 502 DAGVEPSQF 510
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 124/291 (42%), Gaps = 41/291 (14%)
Query: 86 MLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHD 145
+L+ N G+ A+ +F E++ RG L D H ++ FC GQ+D A L + D
Sbjct: 220 VLQVYCNTGKSERALSVFNEILSRGWL-DEHISTILVVSFCKWGQVDKAFELIEMLEERD 278
Query: 146 GLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAH 205
+ T+ +LI K+ + +A ++F +M ++G ++ LI GLCK L+ A
Sbjct: 279 IRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMAL 338
Query: 206 LLFYKMEIGKSPS------------------------------------LFFRLAQG--- 226
L+ +++ P L+ L +G
Sbjct: 339 SLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIR 398
Query: 227 SDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNG 286
+D V ++ S + + E+ KLL + ++PD + +I+IN KA ++
Sbjct: 399 NDLVHEAYSFIQNLMGNYESDGVSEIVKLLKD-HNKAILPDSDSLSIVINCLVKANKVDM 457
Query: 287 AFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPS 337
A L D+ GL P + Y +I+G+ + R E++ K+ M EPS
Sbjct: 458 AVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPS 508
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 81/184 (44%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D+ ++VL+ CK + EA L + G ++ Y+S+IDG+ K + S
Sbjct: 613 DVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCI 672
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
RM + PDVI Y ++ GL GR EA+ + EM + P+ + A+I+G C
Sbjct: 673 VRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKC 732
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
G A E+ + D+ + L+ + +F +M G FP +V
Sbjct: 733 GWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVDR 792
Query: 189 NALI 192
N ++
Sbjct: 793 NYML 796
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 153/339 (45%), Gaps = 16/339 (4%)
Query: 10 LATFNVLLNGFCK-QGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
+ +N + G K +G EEA+ + + ++RD Y+ +I+ + KA + + LY
Sbjct: 228 VTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLY 287
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
M P++ Y ++ + EG +A ++F ++ + GL PD + YNA+++ +
Sbjct: 288 CEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRA 347
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
G A + + D ++ I++ + G+ +A+ +F +M++LG P+ +
Sbjct: 348 GYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSH 407
Query: 189 NALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAG 247
L++ KA + + + +M E G P D+ L + G
Sbjct: 408 MLLLSAYSKARDVTKCEAIVKEMSENGVEP--------------DTFVLNSMLNLYGRLG 453
Query: 248 QTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYG 307
Q K+L ++ + DI TYNILIN + KAG + +LF +L+ K PD VT+
Sbjct: 454 QFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWT 513
Query: 308 TLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMT 346
+ I R + ++ + M+ C P K L++
Sbjct: 514 SRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLS 552
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/405 (22%), Positives = 177/405 (43%), Gaps = 18/405 (4%)
Query: 73 KGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLD 132
K PDVI + +++ + + EA ++ ++++ +P Y +IK +C G ++
Sbjct: 148 KSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIE 207
Query: 133 HARSLHVEISGHDGLHDTCTHTILICE----MCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
A + VE+ H T T+ M +KG EA ++F +M++ C P+ T+
Sbjct: 208 RAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETY 267
Query: 189 NALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQ 248
N +IN KA K + L+ +M R Q ++ +L V G
Sbjct: 268 NLMINLYGKASKSYMSWKLYCEM----------RSHQCKPNICTYTAL---VNAFAREGL 314
Query: 249 TLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGT 308
A ++ QL + G+ PD+ YN L+ S+ +AG GA ++F +Q G PD +Y
Sbjct: 315 CEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNI 374
Query: 309 LIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSL 368
++D R DA + + M + P+ + L++ + + ++ ++ E ++
Sbjct: 375 MVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENG 434
Query: 369 PGRDNDSINA-LEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEAL 427
D +N+ L Y G+ + + L E++ +++ Y+IL+ + +A ++
Sbjct: 435 VEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIE 494
Query: 428 IIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKG 472
+F L E N + + I K+ + +F +D G
Sbjct: 495 ELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSG 539
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 118/277 (42%), Gaps = 15/277 (5%)
Query: 3 MRRFQ--RDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
MR Q ++ T+ L+N F ++G E+A + L+ DG + Y++L++ + +A
Sbjct: 290 MRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGY 349
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
A ++ M G PD Y IM+ G +A +F EM + G+ P +
Sbjct: 350 PYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHML 409
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
++ + + ++ E+S + DT ++ + G + +++ +ME
Sbjct: 410 LLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGP 469
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKV 240
C T+N LIN KAG L+ LF +++ FR D V+ ++
Sbjct: 470 CTADISTYNILINIYGKAGFLERIEELFVELKEKN-----FR--------PDVVTWTSRI 516
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINS 277
+ ++ ++ DSG PD T +L+++
Sbjct: 517 GAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSA 553
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 92/212 (43%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
+ D A++N++++ + + G +A ++ ++R G + + L+ + KAR + +
Sbjct: 366 EPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEA 425
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
+ M + G+ PD + ML G+ + K+ AEM D YN +I +
Sbjct: 426 IVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYG 485
Query: 127 DIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAV 186
G L+ L VE+ + D T T I +K + + E+F +M GC P
Sbjct: 486 KAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGG 545
Query: 187 TFNALINGLCKAGKLDEAHLLFYKMEIGKSPS 218
T L++ ++++ + M G + S
Sbjct: 546 TAKVLLSACSSEEQVEQVTSVLRTMHKGVTVS 577
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 152/344 (44%), Gaps = 16/344 (4%)
Query: 13 FNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKA-RRYNEAHSLYGRM 71
F+ L++ + + G EEA+S+ ++ G L Y+++ID K + + + M
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 72 IKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQL 131
+ G+ PD I + +L S G A +F EM R + D YN ++ C GQ+
Sbjct: 331 QRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQM 390
Query: 132 DHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNAL 191
D A + ++ + + +++ +I K G EA +F +M LG V++N L
Sbjct: 391 DLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTL 450
Query: 192 INGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTL 250
++ K G+ +EA + +M +G D V+ + + G+
Sbjct: 451 LSIYTKVGRSEEALDILREMASVGIK--------------KDVVTYNALLGGYGKQGKYD 496
Query: 251 NAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLI 310
K+ T++ V+P++ TY+ LI+ + K G A ++F++ + GL D V Y LI
Sbjct: 497 EVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALI 556
Query: 311 DGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKI 354
D L + A + D M K P+ Y +++ R +
Sbjct: 557 DALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATM 600
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 141/285 (49%), Gaps = 25/285 (8%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLL------RLLERDGRGIRLSGYSSLIDGFFKARR 60
Q D TFN LL C +G L EA L R +E+D + Y++L+D K +
Sbjct: 336 QPDRITFNSLL-AVCSRGGLWEAARNLFDEMTNRRIEQD-----VFSYNTLLDAICKGGQ 389
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+ A + +M I+P+V+ Y+ ++ G + GR EA+ +F EM G+ D YN
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNT 449
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
++ + +G+ + A + E++ D T+ L+ K+G E +++F +M++
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH 509
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKV 240
P+ +T++ LI+G K G EA MEI FR + + +D V +
Sbjct: 510 VLPNLLTYSTLIDGYSKGGLYKEA------MEI-------FREFKSAGLRADVVLYSALI 556
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMN 285
+ +C+ G +A L+ ++ G+ P++ TYN +I++F ++ M+
Sbjct: 557 DALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMD 601
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 167/363 (46%), Gaps = 24/363 (6%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M ++R ++ +++ +++GF K G+ +EA++L + G + Y++L+ + K R
Sbjct: 400 MPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGR 459
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
EA + M GI DV+ Y +L G +G+ E K+F EM + +LP+ Y+
Sbjct: 460 SEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYST 519
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I G+ G A + E D ++ LI +CK G+V A + ++M K G
Sbjct: 520 LIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG 579
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDH----------- 229
P+ VT+N++I+ ++ +D + + S S L + +
Sbjct: 580 ISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTT 639
Query: 230 VSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFK 289
S++ + + E M E L ++ + QL + P++ T++ ++N+ + + A
Sbjct: 640 ESNNRTTKDCEEGMQELSCILEVFRKMHQLE---IKPNVVTFSAILNACSRCNSFEDASM 696
Query: 290 LFKDLQLKGLSPDSVTYGTLIDGLYRVEREE---DAFKIRDHMLKHVCEPSFAVYKAL-- 344
L ++L+L D+ YG ++ GL +RE A + D + + + A Y AL
Sbjct: 697 LLEELRLF----DNKVYG-VVHGLLMGQRENVWLQAQSLFDKVNEMDGSTASAFYNALTD 751
Query: 345 MTW 347
M W
Sbjct: 752 MLW 754
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 150/354 (42%), Gaps = 49/354 (13%)
Query: 49 SSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQ 108
S++I + + A ++ GG V ++ ++ G EA+ +F M +
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 109 RGLLPDAHCYNAII----KG-------------------------------FCDIGQL-D 132
GL P+ YNA+I KG C G L +
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 133 HARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALI 192
AR+L E++ D ++ L+ +CK G + A E+ QM P+ V+++ +I
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 193 NGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNA 252
+G KAG+ DEA LF +M + +A D VS + + G++ A
Sbjct: 417 DGFAKAGRFDEALNLFGEMR-------YLGIAL------DRVSYNTLLSIYTKVGRSEEA 463
Query: 253 YKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDG 312
+L ++A G+ D+ TYN L+ + K G + K+F +++ + + P+ +TY TLIDG
Sbjct: 464 LDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDG 523
Query: 313 LYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLK 366
+ ++A +I +Y AL+ LC+ + A SL E K
Sbjct: 524 YSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTK 577
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 125/265 (47%), Gaps = 14/265 (5%)
Query: 82 LYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEI 141
L + M+ L G+V A ++F G + ++A+I + G + A S+ +
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 142 SGHDGLHDTCTHTILICEMCKKGM-VREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGK 200
+ + T+ +I K GM ++ + F++M++ G P +TFN+L+ + G
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGL 354
Query: 201 LDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLA 260
+ A LF +M R+ Q D S ++ +C+ GQ A+++L Q+
Sbjct: 355 WEAARNLFDEM-------TNRRIEQ------DVFSYNTLLDAICKGGQMDLAFEILAQMP 401
Query: 261 DSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREE 320
++P++ +Y+ +I+ F KAG + A LF +++ G++ D V+Y TL+ +V R E
Sbjct: 402 VKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSE 461
Query: 321 DAFKIRDHMLKHVCEPSFAVYKALM 345
+A I M + Y AL+
Sbjct: 462 EALDILREMASVGIKKDVVTYNALL 486
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 85/200 (42%), Gaps = 35/200 (17%)
Query: 252 AYKLLTQLADSGVVPDIKTYNILINSFCKAG-NMNGAFKLFKDLQLKGLSPDSVTYGTLI 310
A + + + G+ P++ TYN +I++ K G K F ++Q G+ PD +T+ +L+
Sbjct: 287 AISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLL 346
Query: 311 DGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPG 370
R E A + D M E Y L+ +C+G ++ LAF E L +P
Sbjct: 347 AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAF----EILAQMP- 401
Query: 371 RDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIF 430
V+R + N+ YS ++ GF +A + DEAL +F
Sbjct: 402 -----------------VKRIMP------------NVVSYSTVIDGFAKAGRFDEALNLF 432
Query: 431 SVLDEFNININPTSCVHLIS 450
+ I ++ S L+S
Sbjct: 433 GEMRYLGIALDRVSYNTLLS 452
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 116/526 (22%), Positives = 219/526 (41%), Gaps = 33/526 (6%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
++ D A +N + G A L L++ GR + LI RR +
Sbjct: 154 YKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVY 213
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
+Y +M K G P V LY ++ L G A+ ++ + + GL+ ++ + ++KG
Sbjct: 214 YVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGL 273
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
C G+++ + + + D +T +I + +G + + ++++M + P
Sbjct: 274 CKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDV 333
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCE 245
+ + L+ GLCK G+++ + LF +M +G + D + +E
Sbjct: 334 MAYGTLVVGLCKDGRVERGYELFMEM-------------KGKQILIDREIYRVLIEGFVA 380
Query: 246 AGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVT 305
G+ +A L L DSG + DI YN +I C ++ A+KLF+ + L PD T
Sbjct: 381 DGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFET 440
Query: 306 YGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTW---LCRGKKISLAFSLYL 362
++ + R D ++L+ + E + V L + LC ++ + A +L +
Sbjct: 441 LSPIMVAYVVMNRLSDF----SNVLERIGELGYPVSDYLTQFFKLLCADEEKN-AMALDV 495
Query: 363 EYLKSLPGRDNDSI-NALEEYFMK-GEVERAIRGLLELDFRFRDFNLAP----YSILLIG 416
Y+ G + S+ N L E K G+++++ L L + R P YSI +
Sbjct: 496 FYILKTKGHGSVSVYNILMEALYKMGDIQKS----LSLFYEMRKLGFEPDSSSYSIAICC 551
Query: 417 FCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELG 476
F + V A + E + + + + L GLC + DAV++ + E G
Sbjct: 552 FVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEI-DAVMLLVRECLGNVESG 610
Query: 477 PKICK-ELLECLLVSQDKRKYAIDLIGRMKSRGYRLHKYQYRQTIS 521
P K L C + + + ++ M G +++ Y IS
Sbjct: 611 PMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIIS 656
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 91/185 (49%), Gaps = 2/185 (1%)
Query: 29 AVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLR 88
A+ + +L+ G G +S Y+ L++ +K ++ SL+ M K G PD Y+I +
Sbjct: 492 ALDVFYILKTKGHG-SVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAIC 550
Query: 89 GLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGH-DGL 147
+G V A ++I+ +P Y ++ KG C IG++D L E G+ +
Sbjct: 551 CFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESG 610
Query: 148 HDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLL 207
+ + +C +CK + ++ ++M + G F + V + A+I+G+ K G + A +
Sbjct: 611 PMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREV 670
Query: 208 FYKME 212
F +++
Sbjct: 671 FTELK 675
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 158/353 (44%), Gaps = 15/353 (4%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
F+ D +++ L+ K + +LRL+ R S + LI + KA ++A
Sbjct: 77 FRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAI 136
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
++ ++ + + ++ L + G + +A F L P++ +N +IKGF
Sbjct: 137 DVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGF 196
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
D + A + E+ + T+ LI +C+ + +A+ + M K P+A
Sbjct: 197 LDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNA 256
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKMEI-GKSPSLFFRLAQGSDHVSDSVSLQKKVEHMC 244
VTF L+ GLC G+ +EA L + ME G P L V+ + +
Sbjct: 257 VTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGL--------------VNYGILMSDLG 302
Query: 245 EAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSV 304
+ G+ A LL ++ + PD+ YNIL+N C + A+++ ++Q+KG P++
Sbjct: 303 KRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAA 362
Query: 305 TYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLA 357
TY +IDG R+E + + + ML P+ A + ++ L +G + A
Sbjct: 363 TYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHA 415
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 148/337 (43%), Gaps = 13/337 (3%)
Query: 13 FNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMI 72
F L+ + K G +++A+ + + + ++LI+ +A S +
Sbjct: 119 FMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAK 178
Query: 73 KGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLD 132
+ P+ + + I+++G ++ A K+F EM++ + P YN++I C +
Sbjct: 179 DMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMG 238
Query: 133 HARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALI 192
A+SL ++ + T +L+ +C KG EA+++ ME GC P V + L+
Sbjct: 239 KAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILM 298
Query: 193 NGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNA 252
+ L K G++DEA LL +M+ + D V V H+C + A
Sbjct: 299 SDLGKRGRIDEAKLLLGEMKKRRIKP-------------DVVIYNILVNHLCTECRVPEA 345
Query: 253 YKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDG 312
Y++LT++ G P+ TY ++I+ FC+ + + + + P T+ ++ G
Sbjct: 346 YRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAG 405
Query: 313 LYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLC 349
L + + A + + M K ++ L++ LC
Sbjct: 406 LIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLC 442
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 142/312 (45%), Gaps = 25/312 (8%)
Query: 8 RDLATFNVLLNGFCKQGKLEEAVSLLRLLERDG-RGIRLS----GYSSLIDGFFKARRYN 62
R + + N L+N G+LE+A S DG + +RL ++ LI GF +
Sbjct: 149 RTIQSLNTLINVLVDNGELEKAKSFF-----DGAKDMRLRPNSVSFNILIKGFLDKCDWE 203
Query: 63 EAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAII 122
A ++ M++ + P V+ Y ++ L +G+A + +MI++ + P+A + ++
Sbjct: 204 AACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLM 263
Query: 123 KGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCF 182
KG C G+ + A+ L ++ + IL+ ++ K+G + EA+ + +M+K
Sbjct: 264 KGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIK 323
Query: 183 PSAVTFNALINGLCKAGKLDEAHLLFYKMEI-GKSPSLFFRLAQGSDHVSDSVSLQKKVE 241
P V +N L+N LC ++ EA+ + +M++ G P ++ + + ++
Sbjct: 324 PDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKP--------------NAATYRMMID 369
Query: 242 HMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSP 301
C + +L + S P T+ ++ K GN++ A + + + K LS
Sbjct: 370 GFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSF 429
Query: 302 DSVTYGTLIDGL 313
S + L+ L
Sbjct: 430 GSGAWQNLLSDL 441
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 5/226 (2%)
Query: 5 RFQRDLATFNVLLNGFCKQGKLEEAVSLL-RLLERDGRGIRLSGYSSLIDGFFKARRYNE 63
R + + +FN+L+ GF + E A + +LE + + ++ Y+SLI + +
Sbjct: 181 RLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVT-YNSLIGFLCRNDDMGK 239
Query: 64 AHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIK 123
A SL MIK I P+ + + ++++GL +G EA K+ +M RG P Y ++
Sbjct: 240 AKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMS 299
Query: 124 GFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFP 183
G++D A+ L E+ D + IL+ +C + V EA + +M+ GC P
Sbjct: 300 DLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKP 359
Query: 184 SAVTFNALINGLCKAGKLDEAHLLFYKMEIGK---SPSLFFRLAQG 226
+A T+ +I+G C+ D + M + +P+ F + G
Sbjct: 360 NAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAG 405
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 89/204 (43%), Gaps = 35/204 (17%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M +R + + TF +L+ G C +G+ EA L+ +E G L Y L+ K R
Sbjct: 247 MIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGR 306
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+EA L G M K I PDV++Y I++ L E RV EA ++ EM +G P+A Y
Sbjct: 307 IDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRM 366
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I GFC I D SG + L + +L C
Sbjct: 367 MIDGFCRIEDFD---------SGLNVL-----NAMLASRHC------------------- 393
Query: 181 CFPSAVTFNALINGLCKAGKLDEA 204
P+ TF ++ GL K G LD A
Sbjct: 394 --PTPATFVCMVAGLIKGGNLDHA 415
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 129/299 (43%), Gaps = 22/299 (7%)
Query: 168 EAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEA----HLLFYKMEIGKSPSLFFRL 223
EA +F+Q +++G ++++LI L K+ D L+ Y+ + SLF L
Sbjct: 64 EALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYR-NVRCRESLFMGL 122
Query: 224 AQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGN 283
++H +AG A + ++ V I++ N LIN G
Sbjct: 123 ----------------IQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGE 166
Query: 284 MNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKA 343
+ A F + L P+SV++ LI G E A K+ D ML+ +PS Y +
Sbjct: 167 LEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNS 226
Query: 344 LMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYF-MKGEVERAIRGLLELDFRF 402
L+ +LCR + A SL + +K + + L + KGE A + + ++++R
Sbjct: 227 LIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRG 286
Query: 403 RDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDA 461
L Y IL+ + ++DEA ++ + + I + L++ LC + + +A
Sbjct: 287 CKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEA 345
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 144/312 (46%), Gaps = 14/312 (4%)
Query: 48 YSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMI 107
Y++++ +A+++ + L M++ G P+ + Y ++ + EA+ +F +M
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 108 QRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVR 167
+ G PD Y +I G LD A ++ + DT T++++I + K G +
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 168 EAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGS 227
A ++F +M GC P+ VT+N +++ KA A L+ M Q +
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM-------------QNA 533
Query: 228 DHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGA 287
D V+ +E + G A + T++ +PD Y +L++ + KAGN+ A
Sbjct: 534 GFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
Query: 288 FKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTW 347
++ ++ + GL P+ T +L+ RV + +A+++ +ML PS Y L++
Sbjct: 594 WQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSC 653
Query: 348 LCRGK-KISLAF 358
G+ K+ + F
Sbjct: 654 CTDGRSKLDMGF 665
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 168/395 (42%), Gaps = 43/395 (10%)
Query: 108 QRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVR 167
Q G D H Y ++ Q L E+ +T T+ LI + +
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 168 EAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGK-SPSLFFRLAQG 226
EA +FNQM++ GC P VT+ LI+ KAG LD A ++ +M+ G SP
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSP--------- 467
Query: 227 SDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNG 286
D+ + + + +AG A+KL ++ D G P++ TYNI+++ KA N
Sbjct: 468 -----DTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQN 522
Query: 287 AFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMT 346
A KL++D+Q G PD VTY +++ L E+A + M + P VY L+
Sbjct: 523 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVD 582
Query: 347 WLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMK----GEVERAIRGLLELDFRF 402
+ + A+ Y L + + + N+L F++ E ++ +L L R
Sbjct: 583 LWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLR- 641
Query: 403 RDFNLAPYSILL-----------IGFC---QAKKVDEALIIF-----SVLDEFNININPT 443
+L Y++LL +GFC A A + + D N+ +
Sbjct: 642 --PSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHAN 699
Query: 444 SCVHLISG--LCAKRNLYDAVVIFLYSLDKGFELG 476
+ + L+ +KR L DAVV FL+ + E G
Sbjct: 700 NFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAG 734
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 100/212 (47%), Gaps = 1/212 (0%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D T+ L++ K G L+ A+ + + ++ G YS +I+ KA AH L+
Sbjct: 433 DRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLF 492
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
M+ G P+++ Y IM+ + A+K++ +M G PD Y+ +++
Sbjct: 493 CEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 552
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
G L+ A ++ E+ + + D + +L+ K G V +A + + M G P+ T
Sbjct: 553 GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTC 612
Query: 189 NALINGLCKAGKLDEAHLLFYKM-EIGKSPSL 219
N+L++ + K+ EA+ L M +G PSL
Sbjct: 613 NSLLSTFLRVNKIAEAYELLQNMLALGLRPSL 644
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 120/304 (39%), Gaps = 10/304 (3%)
Query: 212 EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTY 271
+ G + F+ L + D + V ++ A Q KLL ++ G P+ TY
Sbjct: 343 DYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTY 402
Query: 272 NILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLK 331
N LI+S+ +A +N A +F +Q G PD VTY TLID + + A + M
Sbjct: 403 NRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQA 462
Query: 332 HVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEVERA 391
P Y ++ L + + A L+ E + + + N + + K R
Sbjct: 463 GGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKA---RN 519
Query: 392 IRGLLELDFRFRDFNLAP----YSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVH 447
+ L+L ++ P YSI++ ++EA +F+ + + N I
Sbjct: 520 YQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNW-IPDEPVYG 578
Query: 448 LISGLCAKR-NLYDAVVIFLYSLDKGFELGPKICKELLECLLVSQDKRKYAIDLIGRMKS 506
L+ L K N+ A + L G C LL L +K A +L+ M +
Sbjct: 579 LLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFL-RVNKIAEAYELLQNMLA 637
Query: 507 RGYR 510
G R
Sbjct: 638 LGLR 641
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 144/312 (46%), Gaps = 14/312 (4%)
Query: 48 YSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMI 107
Y++++ +A+++ + L M++ G P+ + Y ++ + EA+ +F +M
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 108 QRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVR 167
+ G PD Y +I G LD A ++ + DT T++++I + K G +
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 168 EAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGS 227
A ++F +M GC P+ VT+N +++ KA A L+ M Q +
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM-------------QNA 533
Query: 228 DHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGA 287
D V+ +E + G A + T++ +PD Y +L++ + KAGN+ A
Sbjct: 534 GFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
Query: 288 FKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTW 347
++ ++ + GL P+ T +L+ RV + +A+++ +ML PS Y L++
Sbjct: 594 WQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSC 653
Query: 348 LCRGK-KISLAF 358
G+ K+ + F
Sbjct: 654 CTDGRSKLDMGF 665
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 168/395 (42%), Gaps = 43/395 (10%)
Query: 108 QRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVR 167
Q G D H Y ++ Q L E+ +T T+ LI + +
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 168 EAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGK-SPSLFFRLAQG 226
EA +FNQM++ GC P VT+ LI+ KAG LD A ++ +M+ G SP
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSP--------- 467
Query: 227 SDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNG 286
D+ + + + +AG A+KL ++ D G P++ TYNI+++ KA N
Sbjct: 468 -----DTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQN 522
Query: 287 AFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMT 346
A KL++D+Q G PD VTY +++ L E+A + M + P VY L+
Sbjct: 523 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVD 582
Query: 347 WLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMK----GEVERAIRGLLELDFRF 402
+ + A+ Y L + + + N+L F++ E ++ +L L R
Sbjct: 583 LWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLR- 641
Query: 403 RDFNLAPYSILL-----------IGFC---QAKKVDEALIIF-----SVLDEFNININPT 443
+L Y++LL +GFC A A + + D N+ +
Sbjct: 642 --PSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHAN 699
Query: 444 SCVHLISG--LCAKRNLYDAVVIFLYSLDKGFELG 476
+ + L+ +KR L DAVV FL+ + E G
Sbjct: 700 NFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAG 734
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 100/212 (47%), Gaps = 1/212 (0%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D T+ L++ K G L+ A+ + + ++ G YS +I+ KA AH L+
Sbjct: 433 DRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLF 492
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
M+ G P+++ Y IM+ + A+K++ +M G PD Y+ +++
Sbjct: 493 CEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 552
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
G L+ A ++ E+ + + D + +L+ K G V +A + + M G P+ T
Sbjct: 553 GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTC 612
Query: 189 NALINGLCKAGKLDEAHLLFYKM-EIGKSPSL 219
N+L++ + K+ EA+ L M +G PSL
Sbjct: 613 NSLLSTFLRVNKIAEAYELLQNMLALGLRPSL 644
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 120/304 (39%), Gaps = 10/304 (3%)
Query: 212 EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTY 271
+ G + F+ L + D + V ++ A Q KLL ++ G P+ TY
Sbjct: 343 DYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTY 402
Query: 272 NILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLK 331
N LI+S+ +A +N A +F +Q G PD VTY TLID + + A + M
Sbjct: 403 NRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQA 462
Query: 332 HVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEVERA 391
P Y ++ L + + A L+ E + + + N + + K R
Sbjct: 463 GGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKA---RN 519
Query: 392 IRGLLELDFRFRDFNLAP----YSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVH 447
+ L+L ++ P YSI++ ++EA +F+ + + N I
Sbjct: 520 YQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNW-IPDEPVYG 578
Query: 448 LISGLCAKR-NLYDAVVIFLYSLDKGFELGPKICKELLECLLVSQDKRKYAIDLIGRMKS 506
L+ L K N+ A + L G C LL L +K A +L+ M +
Sbjct: 579 LLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFL-RVNKIAEAYELLQNMLA 637
Query: 507 RGYR 510
G R
Sbjct: 638 LGLR 641
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 144/312 (46%), Gaps = 14/312 (4%)
Query: 48 YSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMI 107
Y++++ +A+++ + L M++ G P+ + Y ++ + EA+ +F +M
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 108 QRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVR 167
+ G PD Y +I G LD A ++ + DT T++++I + K G +
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 168 EAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGS 227
A ++F +M GC P+ VT+N +++ KA A L+ M Q +
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM-------------QNA 533
Query: 228 DHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGA 287
D V+ +E + G A + T++ +PD Y +L++ + KAGN+ A
Sbjct: 534 GFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
Query: 288 FKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTW 347
++ ++ + GL P+ T +L+ RV + +A+++ +ML PS Y L++
Sbjct: 594 WQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSC 653
Query: 348 LCRGK-KISLAF 358
G+ K+ + F
Sbjct: 654 CTDGRSKLDMGF 665
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 168/395 (42%), Gaps = 43/395 (10%)
Query: 108 QRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVR 167
Q G D H Y ++ Q L E+ +T T+ LI + +
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 168 EAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGK-SPSLFFRLAQG 226
EA +FNQM++ GC P VT+ LI+ KAG LD A ++ +M+ G SP
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSP--------- 467
Query: 227 SDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNG 286
D+ + + + +AG A+KL ++ D G P++ TYNI+++ KA N
Sbjct: 468 -----DTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQN 522
Query: 287 AFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMT 346
A KL++D+Q G PD VTY +++ L E+A + M + P VY L+
Sbjct: 523 ALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVD 582
Query: 347 WLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMK----GEVERAIRGLLELDFRF 402
+ + A+ Y L + + + N+L F++ E ++ +L L R
Sbjct: 583 LWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLR- 641
Query: 403 RDFNLAPYSILL-----------IGFC---QAKKVDEALIIF-----SVLDEFNININPT 443
+L Y++LL +GFC A A + + D N+ +
Sbjct: 642 --PSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHAN 699
Query: 444 SCVHLISG--LCAKRNLYDAVVIFLYSLDKGFELG 476
+ + L+ +KR L DAVV FL+ + E G
Sbjct: 700 NFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAG 734
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 100/212 (47%), Gaps = 1/212 (0%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D T+ L++ K G L+ A+ + + ++ G YS +I+ KA AH L+
Sbjct: 433 DRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLF 492
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
M+ G P+++ Y IM+ + A+K++ +M G PD Y+ +++
Sbjct: 493 CEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 552
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
G L+ A ++ E+ + + D + +L+ K G V +A + + M G P+ T
Sbjct: 553 GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTC 612
Query: 189 NALINGLCKAGKLDEAHLLFYKM-EIGKSPSL 219
N+L++ + K+ EA+ L M +G PSL
Sbjct: 613 NSLLSTFLRVNKIAEAYELLQNMLALGLRPSL 644
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 120/304 (39%), Gaps = 10/304 (3%)
Query: 212 EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTY 271
+ G + F+ L + D + V ++ A Q KLL ++ G P+ TY
Sbjct: 343 DYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTY 402
Query: 272 NILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLK 331
N LI+S+ +A +N A +F +Q G PD VTY TLID + + A + M
Sbjct: 403 NRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQA 462
Query: 332 HVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEVERA 391
P Y ++ L + + A L+ E + + + N + + K R
Sbjct: 463 GGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKA---RN 519
Query: 392 IRGLLELDFRFRDFNLAP----YSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVH 447
+ L+L ++ P YSI++ ++EA +F+ + + N I
Sbjct: 520 YQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNW-IPDEPVYG 578
Query: 448 LISGLCAKR-NLYDAVVIFLYSLDKGFELGPKICKELLECLLVSQDKRKYAIDLIGRMKS 506
L+ L K N+ A + L G C LL L +K A +L+ M +
Sbjct: 579 LLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFL-RVNKIAEAYELLQNMLA 637
Query: 507 RGYR 510
G R
Sbjct: 638 LGLR 641
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 146/315 (46%), Gaps = 26/315 (8%)
Query: 22 KQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVI 81
++G +EEA+ + +L+ G + +S++ G KAR+ + L+ M++ + I
Sbjct: 157 EEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSERI 216
Query: 82 LYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLD-HARSLHVE 140
++R L + G V E ++ + +++GL P + Y +I GFC+IG + LH
Sbjct: 217 --RCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTM 274
Query: 141 ISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGK 200
I+ + + +I +C EA +F ++ G P V + +I G C+ G
Sbjct: 275 IAWNH-FPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGW 333
Query: 201 LDEAHLLFYKM-EIGKSPSLF---------FRLAQGS------------DHVSDSVSLQK 238
L A L+++M + G P+ F F+ + S + +S
Sbjct: 334 LGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNT 393
Query: 239 KVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKG 298
++ C G++ A+++ ++++GV P+ TYN LI FCK + KL+K+L+ G
Sbjct: 394 MIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALG 453
Query: 299 LSPDSVTYGTLIDGL 313
L P + Y L+ L
Sbjct: 454 LKPSGMAYAALVRNL 468
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 131/307 (42%), Gaps = 16/307 (5%)
Query: 160 MCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSL 219
+ ++G+V EA E++N ++ +G S VT N+++ G KA KLD F+++ S
Sbjct: 155 LSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDR----FWELHKEMVESE 210
Query: 220 FFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFC 279
F DS ++ + +C+ G Y+LL Q G+ P Y LI+ FC
Sbjct: 211 F-----------DSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFC 259
Query: 280 KAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFA 339
+ GN ++ + P Y +I GL +++ +A+ I ++ P
Sbjct: 260 EIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRV 319
Query: 340 VYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINAL-EEYFMKGEVERAIRGLLEL 398
VY ++ C + A L+ E +K + + N + +F +GE+ E+
Sbjct: 320 VYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEM 379
Query: 399 DFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNL 458
+ + ++ GFC K DEA IF + E + N + LI G C + +
Sbjct: 380 LRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKV 439
Query: 459 YDAVVIF 465
+ ++
Sbjct: 440 EKGLKLY 446
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 68/136 (50%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
+ D + ++ GFC++G L A L + + G Y+ +I G FK +
Sbjct: 314 YAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVE 373
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
+ Y M++ G ++ M++G + G+ EA ++F M + G+ P+A YNA+IKGF
Sbjct: 374 AFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGF 433
Query: 126 CDIGQLDHARSLHVEI 141
C +++ L+ E+
Sbjct: 434 CKENKVEKGLKLYKEL 449
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 71/131 (54%), Gaps = 4/131 (3%)
Query: 12 TFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRM 71
+NV+++G K+G++ + + R+G G + +++I GF + +EA ++ M
Sbjct: 355 AYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNM 414
Query: 72 IKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQL 131
+ G+ P+ I Y +++G E +V + +K++ E+ GL P Y A+++ ++
Sbjct: 415 SETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVR---NLKMS 471
Query: 132 DH-ARSLHVEI 141
D A SL++EI
Sbjct: 472 DSVATSLNLEI 482
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 136/299 (45%), Gaps = 13/299 (4%)
Query: 48 YSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMI 107
Y++++ +A+++ E + L M++ G P+ + Y ++ + EA+ +F +M
Sbjct: 362 YTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQ 421
Query: 108 QRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVR 167
+ G PD Y +I G LD A ++ + DT T++++I + K G +
Sbjct: 422 EAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLP 481
Query: 168 EAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGS 227
A +F +M GC P+ VTFN +I KA + A L+ M Q +
Sbjct: 482 AAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDM-------------QNA 528
Query: 228 DHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGA 287
D V+ +E + G A + ++ VPD Y +L++ + KAGN++ A
Sbjct: 529 GFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKA 588
Query: 288 FKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMT 346
++ ++ + GL P+ T +L+ RV R +A+ + ML PS Y L++
Sbjct: 589 WQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLS 647
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 124/279 (44%), Gaps = 15/279 (5%)
Query: 108 QRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVR 167
Q G D H Y ++ Q L E+ +T T+ LI + ++
Sbjct: 352 QPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLK 411
Query: 168 EAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQG 226
EA +FNQM++ GC P VT+ LI+ KAG LD A ++ +M E G SP
Sbjct: 412 EAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSP--------- 462
Query: 227 SDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNG 286
D+ + + + +AG A++L ++ G P++ T+NI+I KA N
Sbjct: 463 -----DTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYET 517
Query: 287 AFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMT 346
A KL++D+Q G PD VTY +++ L E+A + M + P VY L+
Sbjct: 518 ALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVD 577
Query: 347 WLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMK 385
+ + A+ Y L++ + + N+L F++
Sbjct: 578 LWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLR 616
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 63/147 (42%)
Query: 219 LFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSF 278
F+ L + D + V ++ A Q KLL ++ G P+ TYN LI+S+
Sbjct: 345 FFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSY 404
Query: 279 CKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSF 338
+A + A +F +Q G PD VTY TLID + + A + M + P
Sbjct: 405 GRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDT 464
Query: 339 AVYKALMTWLCRGKKISLAFSLYLEYL 365
Y ++ L + + A L+ E +
Sbjct: 465 FTYSVIINCLGKAGHLPAAHRLFCEMV 491
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/438 (21%), Positives = 202/438 (46%), Gaps = 24/438 (5%)
Query: 4 RRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNE 63
R +RD+ +N +L +C+ GK EEAV L++ +E++G L ++ LI G+ + + +
Sbjct: 241 RMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDA 300
Query: 64 AHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIK 123
A L +M GI DV + M+ GL + G +A+ MF +M G++P+A + +
Sbjct: 301 AMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVS 360
Query: 124 GFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFP 183
+ ++ +H + D L+ K G + +A+++F+ ++ +
Sbjct: 361 ACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVY- 419
Query: 184 SAVTFNALINGLCKAGKLDEAHLLFYKMEIGK-SPSLFFRLAQGSDHVSDSVSLQKKVEH 242
T+N++I G C+AG +A+ LF +M+ P++ S ++ +
Sbjct: 420 ---TWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNG--------- 467
Query: 243 MCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPD 302
+ G+ ++ ++ + + D V + T+N++I + + G + A +LF+ +Q P+
Sbjct: 468 --DEGEAMDLFQRMEK--DGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPN 523
Query: 303 SVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYL 362
SVT +L+ + + +I +L+ + AV AL + I + +++L
Sbjct: 524 SVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFL 583
Query: 363 EYLKSLPGRDNDSINAL-EEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAK 421
+ +D + N+L Y + G A+ ++ + N S +++
Sbjct: 584 ----GMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMG 639
Query: 422 KVDEALIIF-SVLDEFNI 438
VDE +F S+ ++++I
Sbjct: 640 NVDEGKKVFYSIANDYHI 657
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 109/463 (23%), Positives = 199/463 (42%), Gaps = 82/463 (17%)
Query: 48 YSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMI 107
+S++I + + R+ E L+ M+K G+LPD L+ +L+G +N G V + + +I
Sbjct: 149 WSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVI 208
Query: 108 QRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVR 167
+ G+ N+I+ + G+LD A + D + +++L+ C+ G
Sbjct: 209 KLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVI---AWNSVLLA-YCQNGKHE 264
Query: 168 EAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEI-GKSPSLFFRLAQG 226
EA E+ +MEK G P VT+N LI G + GK D A L KME G + +F A
Sbjct: 265 EAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMI 324
Query: 227 SDHVSDSVSLQK--KVEHMCEAGQTLNAYKLLTQLA-------------------DSGVV 265
S + + + Q M AG NA +++ ++ G +
Sbjct: 325 SGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFI 384
Query: 266 PDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKI 325
D+ N L++ + K G + A K+F ++ K D T+ ++I G + A+++
Sbjct: 385 DDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKAYEL 440
Query: 326 RDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMK 385
M P+ + +++ Y+K+ G + ++++ +
Sbjct: 441 FTRMQDANLRPNIITWNTMIS----------------GYIKN--GDEGEAMDLFQRMEKD 482
Query: 386 GEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSC 445
G+V+R N A +++++ G+ Q K DEAL +F + +F+ P S
Sbjct: 483 GKVQR---------------NTATWNLIIAGYIQNGKKDEALELFRKM-QFS-RFMPNS- 524
Query: 446 VHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKELLECLL 488
V ++S L A NL LG K+ +E+ C+L
Sbjct: 525 VTILSLLPACANL----------------LGAKMVREIHGCVL 551
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 161/370 (43%), Gaps = 52/370 (14%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
+R+L T++ ++ + ++ + E L RL+ +DG + ++ G
Sbjct: 143 ERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKV 202
Query: 67 LYGRMIKGGILP-------------------------------DVILYAIMLRGLSNEGR 95
++ +IK G+ DVI + +L G+
Sbjct: 203 IHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGK 262
Query: 96 VGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTI 155
EAV++ EM + G+ P +N +I G+ +G+ D A L ++ D T T
Sbjct: 263 HEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTA 322
Query: 156 LICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKL----DEAHLLFYKM 211
+I + GM +A +MF +M G P+AVT + ++ C K+ E H + KM
Sbjct: 323 MISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSA-CSCLKVINQGSEVHSIAVKM 381
Query: 212 E------IGKS-PSLFFRLAQGSD--HVSDSV------SLQKKVEHMCEAGQTLNAYKLL 256
+G S ++ + + D V DSV + + C+AG AY+L
Sbjct: 382 GFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELF 441
Query: 257 TQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKG-LSPDSVTYGTLIDGLYR 315
T++ D+ + P+I T+N +I+ + K G+ A LF+ ++ G + ++ T+ +I G +
Sbjct: 442 TRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQ 501
Query: 316 VEREEDAFKI 325
++++A ++
Sbjct: 502 NGKKDEALEL 511
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 113/276 (40%), Gaps = 29/276 (10%)
Query: 90 LSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHD 149
L G + EA K + Q+G Y +++ D G + R LH G D
Sbjct: 56 LCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARF-GLFTEPD 114
Query: 150 TCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLF- 208
T L+ K G + +A+++F+ M + F T++A+I + + E LF
Sbjct: 115 VFVETKLLSMYAKCGCIADARKVFDSMRERNLF----TWSAMIGAYSRENRWREVAKLFR 170
Query: 209 YKMEIGKSPS--LFFRLAQGSDHVSD--------SVSLQKKVEHMCEAGQTLNAY----- 253
M+ G P LF ++ QG + D SV ++ + ++ A
Sbjct: 171 LMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCG 230
Query: 254 --KLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLID 311
T+ D+ +N ++ ++C+ G A +L K+++ +G+SP VT+ LI
Sbjct: 231 ELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIG 290
Query: 312 GLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTW 347
G ++ + + A + M +F + + TW
Sbjct: 291 GYNQLGKCDAAMDLMQKM------ETFGITADVFTW 320
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 125/281 (44%), Gaps = 17/281 (6%)
Query: 45 LSGYSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFA 104
++ ++ L+D K E +L RM + + PD + ++ G +A+K+
Sbjct: 234 INAFNMLLDALCKCGLVKEGEALLRRM-RHRVKPDANTFNVLFFGWCRVRDPKKAMKLLE 292
Query: 105 EMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLH---VEISGHDGLHDTCTHTILICEMC 161
EMI+ G P+ Y A I FC G +D A L + T ++I +
Sbjct: 293 EMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALA 352
Query: 162 KKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFF 221
K E E+ +M GC P T+ +I G+C A K+DEA+ +M P
Sbjct: 353 KNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPP--- 409
Query: 222 RLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKA 281
D V+ + +CE +T A KL ++ +S P ++TYN+LI+ F +
Sbjct: 410 ----------DIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEM 459
Query: 282 GNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDA 322
+ +GAF + ++ + D TY +I+GL+ R ++A
Sbjct: 460 DDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEA 500
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 125/284 (44%), Gaps = 21/284 (7%)
Query: 70 RMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIG 129
+ I+ P++ + ++L L G V E + M R + PDA+ +N + G+C +
Sbjct: 224 KRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVR 282
Query: 130 QLDHARSLHVEI--SGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCF---PS 184
A L E+ +GH + T+ I C+ GMV EA ++F+ M G P+
Sbjct: 283 DPKKAMKLLEEMIEAGHKP--ENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPT 340
Query: 185 AVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMC 244
A TF +I L K K +E L +M ++ G + D + + +E MC
Sbjct: 341 AKTFALMIVALAKNDKAEECFELIGRM-----------ISTGC--LPDVSTYKDVIEGMC 387
Query: 245 EAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSV 304
A + AYK L ++++ G PDI TYN + C+ + A KL+ + +P
Sbjct: 388 MAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQ 447
Query: 305 TYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWL 348
TY LI + ++ + AF M K C Y A++ L
Sbjct: 448 TYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGL 491
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 137/354 (38%), Gaps = 54/354 (15%)
Query: 5 RFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEA 64
R + D TFNVL G+C+ ++A+ LL + G Y + ID F +A +EA
Sbjct: 263 RVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEA 322
Query: 65 HSLYGRMIKGGIL---PDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAI 121
L+ MI G P +A+M+ L+ + E ++ MI G LPD Y +
Sbjct: 323 ADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDV 382
Query: 122 IKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGC 181
I+G C ++D A E+S D T+ + +C+ EA +++ +M + C
Sbjct: 383 IEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRC 442
Query: 182 FPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVE 241
PS T+N LI S+FF
Sbjct: 443 APSVQTYNMLI-------------------------SMFF-------------------- 457
Query: 242 HMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSP 301
E A+ T++ V D++TY +IN A L +++ KGL
Sbjct: 458 ---EMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKL 514
Query: 302 DSVTYGTLIDGLYRVEREEDAFKIRDHMLK---HVCEPSFAVYKALMTWLCRGK 352
+ + + L V + K+ +HM K H FA+ + + RGK
Sbjct: 515 PYRVFDSFLMRLSEVGNLKAIHKVSEHMKKFYNHSMARRFALSEKRKSTKLRGK 568
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 148/345 (42%), Gaps = 30/345 (8%)
Query: 47 GYSSLIDGFFKARRYNEAHSLYGRMI-------KGGILPDVILYAIMLRGLSNEGRVGEA 99
Y+ +ID + N+ + M+ K +L DV+L +LR R
Sbjct: 161 AYNEMIDILSSTKYKNKQFRIVIDMLDYMKRNNKTVVLVDVLLE--ILRKYCE--RYLTH 216
Query: 100 VKMFAEM--IQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILI 157
V+ FA+ I+ P+ + +N ++ C G + +L + H D T +L
Sbjct: 217 VQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMR-HRVKPDANTFNVLF 275
Query: 158 CEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSP 217
C+ ++A ++ +M + G P T+ A I+ C+AG +DEA LF M I K
Sbjct: 276 FGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFM-ITKGS 334
Query: 218 SLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINS 277
++ A+ + +++ K E ++L+ ++ +G +PD+ TY +I
Sbjct: 335 AVSAPTAKTFALMIVALAKNDKAEE---------CFELIGRMISTGCLPDVSTYKDVIEG 385
Query: 278 FCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPS 337
C A ++ A+K ++ KG PD VTY + L + ++A K+ M++ C PS
Sbjct: 386 MCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPS 445
Query: 338 FAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEY 382
Y L++ AF+ + E K D + +E Y
Sbjct: 446 VQTYNMLISMFFEMDDPDGAFNTWTEMDK------RDCVQDVETY 484
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 111/277 (40%), Gaps = 20/277 (7%)
Query: 155 ILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EI 213
+L+ +CK G+V+E + + +M + P A TFN L G C+ +A L +M E
Sbjct: 239 MLLDALCKCGLVKEGEALLRRM-RHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEA 297
Query: 214 GKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVV---PDIKT 270
G P F A ++ C+AG A L + G P KT
Sbjct: 298 GHKPENFTYCAA--------------IDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKT 343
Query: 271 YNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHML 330
+ ++I + K F+L + G PD TY +I+G+ E+ ++A+K D M
Sbjct: 344 FALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMS 403
Query: 331 KHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINAL-EEYFMKGEVE 389
P Y + LC +K A LY ++S + N L +F + +
Sbjct: 404 NKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPD 463
Query: 390 RAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEA 426
A E+D R ++ Y ++ G + EA
Sbjct: 464 GAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEA 500
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 103/256 (40%), Gaps = 51/256 (19%)
Query: 183 PSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEH 242
P FN L++ LCK G + E L +M P D+ +
Sbjct: 232 PEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKP--------------DANTFNVLFFG 277
Query: 243 MCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLS-- 300
C A KLL ++ ++G P+ TY I++FC+AG ++ A LF + KG +
Sbjct: 278 WCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVS 337
Query: 301 -PDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFS 359
P + T+ +I L + ++ E+ F++ M+ C P + YK ++ +C +K+ A+
Sbjct: 338 APTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYK 397
Query: 360 LYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQ 419
L+E KG ++ Y+ L C+
Sbjct: 398 F------------------LDEMSNKGYPP----------------DIVTYNCFLRVLCE 423
Query: 420 AKKVDEALIIFSVLDE 435
+K DEAL ++ + E
Sbjct: 424 NRKTDEALKLYGRMVE 439
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 146/321 (45%), Gaps = 14/321 (4%)
Query: 10 LATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYG 69
+ TF + + F + ++AV + L+++ I + + L+D +A+ EA L+
Sbjct: 229 METFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFD 288
Query: 70 RMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIG 129
+ +K P+++ Y ++L G + EA +++ +MI +GL PD +N +++G
Sbjct: 289 K-LKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSR 347
Query: 130 QLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFN 189
+ A L + + ++TI+I + CK+ + A E F+ M G P A +
Sbjct: 348 KKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYT 407
Query: 190 ALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQT 249
LI G KLD + L +M Q H D + ++ M
Sbjct: 408 CLITGFGTQKKLDTVYELLKEM-------------QEKGHPPDGKTYNALIKLMANQKMP 454
Query: 250 LNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTL 309
+A ++ ++ + + P I T+N+++ S+ A N +++++ KG+ PD +Y L
Sbjct: 455 EHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVL 514
Query: 310 IDGLYRVEREEDAFKIRDHML 330
I GL + +A + + ML
Sbjct: 515 IRGLIGEGKSREACRYLEEML 535
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 123/280 (43%), Gaps = 15/280 (5%)
Query: 5 RFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEA 64
RF ++ T+ VLLNG+C+ L EA + + G + ++ +++G ++R+ ++A
Sbjct: 293 RFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDA 352
Query: 65 HSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKG 124
L+ M G P+V Y IM+R + + A++ F +M+ GL PDA Y +I G
Sbjct: 353 IKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG 412
Query: 125 FCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPS 184
F +LD L E+ D T+ LI M + M A ++N+M + PS
Sbjct: 413 FGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPS 472
Query: 185 AVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHM 243
TFN ++ A + ++ +M + G P D S + +
Sbjct: 473 IHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICP--------------DDNSYTVLIRGL 518
Query: 244 CEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGN 283
G++ A + L ++ D G+ + YN F + G
Sbjct: 519 IGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 558
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 140/343 (40%), Gaps = 15/343 (4%)
Query: 37 ERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRV 96
ER G Y+S++ K R++ S+ M G+L + + I ++ +
Sbjct: 187 ERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKER 245
Query: 97 GEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTIL 156
+AV +F M + N ++ A+ L ++ + T+T+L
Sbjct: 246 KKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTVL 304
Query: 157 ICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKS 216
+ C+ + EA ++N M G P V N ++ GL ++ K +A LF+ M+ K
Sbjct: 305 LNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMK-SKG 363
Query: 217 PSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILIN 276
P R S + C+ A + + DSG+ PD Y LI
Sbjct: 364 PCPNVR------------SYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLIT 411
Query: 277 SFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEP 336
F ++ ++L K++Q KG PD TY LI + + E A +I + M+++ EP
Sbjct: 412 GFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEP 471
Query: 337 SFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINAL 379
S + +M + + +++ E +K D++S L
Sbjct: 472 SIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVL 514
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/368 (21%), Positives = 154/368 (41%), Gaps = 16/368 (4%)
Query: 108 QRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVR 167
++G D+ YN+++ Q + S+ E+ G GL T TI + +
Sbjct: 188 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEM-GTKGLLTMETFTIAMKAFAAAKERK 246
Query: 168 EAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGS 227
+A +F M+K T N L++ L +A EA +LF K++ +P++
Sbjct: 247 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNM-------- 298
Query: 228 DHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGA 287
++ + C + A ++ + D G+ PDI +N+++ ++ + A
Sbjct: 299 ------MTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDA 352
Query: 288 FKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTW 347
KLF ++ KG P+ +Y +I + E A + D M+ +P AVY L+T
Sbjct: 353 IKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG 412
Query: 348 LCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEV-ERAIRGLLELDFRFRDFN 406
KK+ + L E + D + NAL + ++ E A R ++ + +
Sbjct: 413 FGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPS 472
Query: 407 LAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFL 466
+ +++++ + A+ + ++ + + I + S LI GL + +A
Sbjct: 473 IHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLE 532
Query: 467 YSLDKGFE 474
LDKG +
Sbjct: 533 EMLDKGMK 540
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 161/354 (45%), Gaps = 29/354 (8%)
Query: 13 FNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMI 72
FN ++N F + G +E+AV L ++ G S Y++LI G+ A + + L M+
Sbjct: 118 FNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLML 177
Query: 73 KGG---ILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIG 129
+ G + P++ + ++++ + +V EA ++ +M + G+ PD YN I + G
Sbjct: 178 EEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKG 237
Query: 130 QLDHARSLHVE--ISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVT 187
+ A S VE + + T I++ C++G VR+ +M+++ + V
Sbjct: 238 ETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVV 297
Query: 188 FNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAG 247
FN+LING + D G D V+ ++ L E + G
Sbjct: 298 FNSLINGFVEVMDRD-----------------------GIDEVTLTLLLMSFNEEVELVG 334
Query: 248 QTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYG 307
++LT + + V D+ TY+ ++N++ AG M A ++FK++ G+ PD+ Y
Sbjct: 335 NQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYS 394
Query: 308 TLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLY 361
L G R + + A ++ + ++ P+ ++ +++ C + A ++
Sbjct: 395 ILAKGYVRAKEPKKAEELLETLIVE-SRPNVVIFTTVISGWCSNGSMDDAMRVF 447
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 131/304 (43%), Gaps = 50/304 (16%)
Query: 5 RFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEA 64
R + +L FN L+NGF + +++RD GI + L+ F NE
Sbjct: 290 RVEANLVVFNSLINGF------------VEVMDRD--GIDEVTLTLLLMSF------NEE 329
Query: 65 HSLYGR----------MIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPD 114
L G M + + DVI Y+ ++ S+ G + +A ++F EM++ G+ PD
Sbjct: 330 VELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPD 389
Query: 115 AHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFN 174
AH Y+ + KG+ + A L +E + + T +I C G + +A +FN
Sbjct: 390 AHAYSILAKGYVRAKEPKKAEEL-LETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFN 448
Query: 175 QMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKME-IGKSP--SLFFRLAQG----- 226
+M K G P+ TF L+ G + + +A + M G P S F LA+
Sbjct: 449 KMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAG 508
Query: 227 -SDHVSDSVSLQK-------KVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSF 278
+D + +++ K K+E + + + +++ LL +P K N+ S
Sbjct: 509 LTDESNKAINALKCKDIEIAKLEKLYQKQSSGSSFNLLQIPVGKRELPTAKAMNL---SA 565
Query: 279 CKAG 282
CK G
Sbjct: 566 CKLG 569
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 168/381 (44%), Gaps = 28/381 (7%)
Query: 8 RDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSL 67
R + + L+N ++G+ EA ++ + L G L Y++L+ ++Y S+
Sbjct: 43 RTVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSI 102
Query: 68 YGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCD 127
+ + G D I + ++ S G + +AV+ +M + GL P YN +IKG+
Sbjct: 103 VSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGI 162
Query: 128 IGQLDHARS---LHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPS 184
G+ + + L +E D + T +L+ CKK V EA E+ +ME+ G P
Sbjct: 163 AGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPD 222
Query: 185 AVTFNALINGLCKAGKLDEAHL-LFYKM---EIGKSPSLFFRLAQG----SDHVSDSVSL 236
VT+N + + G+ A + KM E K + G V D +
Sbjct: 223 TVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRF 282
Query: 237 QKKVEHM-CEA-----GQTLNAY----------KLLTQLADSGVVPDIKTYNILINSFCK 280
++++ M EA +N + ++LT + + V D+ TY+ ++N++
Sbjct: 283 VRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSS 342
Query: 281 AGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAV 340
AG M A ++FK++ G+ PD+ Y L G R + + A ++ + ++ P+ +
Sbjct: 343 AGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVE-SRPNVVI 401
Query: 341 YKALMTWLCRGKKISLAFSLY 361
+ +++ C + A ++
Sbjct: 402 FTTVISGWCSNGSMDDAMRVF 422
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 154/343 (44%), Gaps = 26/343 (7%)
Query: 13 FNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMI 72
FN ++N F + G +E+AV L ++ G S Y++LI G+ A + + L M+
Sbjct: 118 FNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLML 177
Query: 73 KGG---ILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIG 129
+ G + P++ + ++++ + +V EA ++ +M + G+ PD YN I + G
Sbjct: 178 EEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKG 237
Query: 130 QLDHARSLHVE--ISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVT 187
+ A S VE + + T I++ C++G VR+ +M+++ + V
Sbjct: 238 ETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVV 297
Query: 188 FNALINGLCKA---GKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMC 244
FN+LING + +DE L + + +D ++ +
Sbjct: 298 FNSLINGFVEVMDRDGIDEVLTLMKECNVK----------------ADVITYSTVMNAWS 341
Query: 245 EAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSV 304
AG A ++ ++ +GV PD Y+IL + +A A +L + L ++ P+ V
Sbjct: 342 SAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVV 400
Query: 305 TYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTW 347
+ T+I G +DA ++ + M K P+ ++ LM W
Sbjct: 401 IFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLM-W 442
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 134/287 (46%), Gaps = 20/287 (6%)
Query: 12 TFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRM 71
T +++ G+C++G++ + + +R ++ L ++SLI+GF + + + M
Sbjct: 262 TCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLM 321
Query: 72 IKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQL 131
+ + DVI Y+ ++ S+ G + +A ++F EM++ G+ PDAH Y+ + KG+ +
Sbjct: 322 KECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEP 381
Query: 132 DHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNAL 191
A L +E + + T +I C G + +A +FN+M K G P+ TF L
Sbjct: 382 KKAEEL-LETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETL 440
Query: 192 INGLCKAGKLDEAHLLFYKME-IGKSP--SLFFRLAQG------SDHVSDSVSLQK---- 238
+ G + + +A + M G P S F LA+ +D + +++ K
Sbjct: 441 MWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALKCKDI 500
Query: 239 ---KVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAG 282
K+E + + + +++ LL +P K N+ S CK G
Sbjct: 501 EIAKLEKLYQKQSSGSSFNLLQIPVGKRELPTAKAMNL---SACKLG 544
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 140/310 (45%), Gaps = 17/310 (5%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHS-L 67
++ TFNVL+ +CK+ K+EEA +++ +E G Y+++ + + A S +
Sbjct: 187 NIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEV 246
Query: 68 YGRMI-KGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
+M+ K P+ I++ G EGRV + ++ M + + + +N++I GF
Sbjct: 247 VEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFV 306
Query: 127 DIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAV 186
++ D + + + D T++ ++ G + +A ++F +M K G P A
Sbjct: 307 EVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAH 366
Query: 187 TFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEA 246
++ L G +A + +A L + + P++ V + C
Sbjct: 367 AYSILAKGYVRAKEPKKAEELLETLIVESRPNV--------------VIFTTVISGWCSN 412
Query: 247 GQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTY 306
G +A ++ ++ GV P+IKT+ L+ + + A ++ + ++ G+ P++ T+
Sbjct: 413 GSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTF 472
Query: 307 GTLIDGLYRV 316
L + +RV
Sbjct: 473 LLLAEA-WRV 481
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 146/322 (45%), Gaps = 16/322 (4%)
Query: 10 LATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYG 69
+ TF + + F + ++AV + L+++ I + + L+D +A+ EA L+
Sbjct: 229 METFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFD 288
Query: 70 RMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC-DI 128
+ +K P+++ Y ++L G + EA +++ +MI GL PD +N +++G +
Sbjct: 289 K-LKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSM 347
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
+ D + HV + + ++TI+I + CK+ + A E F+ M G P A +
Sbjct: 348 KKSDAIKLFHV-MKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVY 406
Query: 189 NALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQ 248
LI G KLD + L +M Q H D + ++ M
Sbjct: 407 TCLITGFGTQKKLDTVYELLKEM-------------QEKGHPPDGKTYNALIKLMANQKM 453
Query: 249 TLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGT 308
+ ++ ++ + + P I T+N+++ S+ A N ++ ++ KG+ PD +Y
Sbjct: 454 PEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTV 513
Query: 309 LIDGLYRVEREEDAFKIRDHML 330
LI GL + +A + + ML
Sbjct: 514 LIRGLISEGKSREACRYLEEML 535
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 121/280 (43%), Gaps = 15/280 (5%)
Query: 5 RFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEA 64
RF ++ T+ VLLNG+C+ L EA + + G + ++ +++G ++ + ++A
Sbjct: 293 RFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDA 352
Query: 65 HSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKG 124
L+ M G P+V Y IM+R + + A++ F +M+ GL PDA Y +I G
Sbjct: 353 IKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG 412
Query: 125 FCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPS 184
F +LD L E+ D T+ LI M + M ++N+M + PS
Sbjct: 413 FGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPS 472
Query: 185 AVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHM 243
TFN ++ A + ++ +M + G P D S + +
Sbjct: 473 IHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICP--------------DDNSYTVLIRGL 518
Query: 244 CEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGN 283
G++ A + L ++ D G+ + YN F + G
Sbjct: 519 ISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 558
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 114/272 (41%), Gaps = 15/272 (5%)
Query: 108 QRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVR 167
++G + YN+++ Q + S+ E+ G GL T TI + +
Sbjct: 188 RQGFAHASRTYNSMMSILAKTRQFETMVSVLEEM-GTKGLLTMETFTIAMKAFAAAKERK 246
Query: 168 EAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGS 227
+A +F M+K T N L++ L +A EA +LF K++ +P++
Sbjct: 247 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNM-------- 298
Query: 228 DHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGA 287
++ + C + A ++ + D G+ PDI +N+++ ++ + A
Sbjct: 299 ------MTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDA 352
Query: 288 FKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTW 347
KLF ++ KG P+ +Y +I + E A + D M+ +P AVY L+T
Sbjct: 353 IKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG 412
Query: 348 LCRGKKISLAFSLYLEYLKSLPGRDNDSINAL 379
KK+ + L E + D + NAL
Sbjct: 413 FGTQKKLDTVYELLKEMQEKGHPPDGKTYNAL 444
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 158/345 (45%), Gaps = 48/345 (13%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D ++ +L+ GFC +GKLEEA LL +S++
Sbjct: 186 DRDSYRILMKGFCLEGKLEEATHLL-------------------------------YSMF 214
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
R+ + G D+++Y I+L L + G V +A+++ +++++GL CY+ I G +
Sbjct: 215 WRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWES 274
Query: 129 GQ--LDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAV 186
++ + L E + +++ + ++ ++G + E +E+ M G P+
Sbjct: 275 SSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPF 334
Query: 187 TFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKK-VEHMCE 245
+ A + LC+AGKL EA + K + QG H +V + ++ +C+
Sbjct: 335 IYGAKVKALCRAGKLKEAVSVINK-----------EMMQG--HCLPTVGVYNVLIKGLCD 381
Query: 246 AGQTLNAYKLLTQLADS-GVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSV 304
G+++ A L +++ V + +TY L++ C+ G A ++ +++ +K P
Sbjct: 382 DGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVE 441
Query: 305 TYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLC 349
TY +I GL ++R +A + M+ P +V+KAL +C
Sbjct: 442 TYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 132/313 (42%), Gaps = 28/313 (8%)
Query: 162 KKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFF 221
+ G + +A +F + + C +++F+ L+ + K +L+ A +F K
Sbjct: 93 RAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRK----------- 141
Query: 222 RLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKA 281
G + S +L ++ +C+ ++ A ++ ++ G PD +Y IL+ FC
Sbjct: 142 -YCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLE 200
Query: 282 GNMNGA----FKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPS 337
G + A + +F + KG D V Y L+D L +DA +I +L+ +
Sbjct: 201 GKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAP 260
Query: 338 FAVYKALMT--WLCRGKKISLAFSLYLEYL--KSLPGRDNDSINALEEYFMKGEVERAIR 393
Y + W + I L E L ++P D+ S A + F +G++
Sbjct: 261 KRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMAT-DLFEEGKLVEGEE 319
Query: 394 GLLELDFRFRDFNLAP--YSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVH--LI 449
LL + R + F P Y + C+A K+ EA+ + + + + PT V+ LI
Sbjct: 320 VLLAM--RSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINK-EMMQGHCLPTVGVYNVLI 376
Query: 450 SGLCAKRNLYDAV 462
GLC +AV
Sbjct: 377 KGLCDDGKSMEAV 389
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 158/345 (45%), Gaps = 48/345 (13%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D ++ +L+ GFC +GKLEEA LL +S++
Sbjct: 186 DRDSYRILMKGFCLEGKLEEATHLL-------------------------------YSMF 214
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
R+ + G D+++Y I+L L + G V +A+++ +++++GL CY+ I G +
Sbjct: 215 WRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWES 274
Query: 129 GQ--LDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAV 186
++ + L E + +++ + ++ ++G + E +E+ M G P+
Sbjct: 275 SSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPF 334
Query: 187 TFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKK-VEHMCE 245
+ A + LC+AGKL EA + K + QG H +V + ++ +C+
Sbjct: 335 IYGAKVKALCRAGKLKEAVSVINK-----------EMMQG--HCLPTVGVYNVLIKGLCD 381
Query: 246 AGQTLNAYKLLTQLADS-GVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSV 304
G+++ A L +++ V + +TY L++ C+ G A ++ +++ +K P
Sbjct: 382 DGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVE 441
Query: 305 TYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLC 349
TY +I GL ++R +A + M+ P +V+KAL +C
Sbjct: 442 TYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 132/313 (42%), Gaps = 28/313 (8%)
Query: 162 KKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFF 221
+ G + +A +F + + C +++F+ L+ + K +L+ A +F K
Sbjct: 93 RAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRK----------- 141
Query: 222 RLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKA 281
G + S +L ++ +C+ ++ A ++ ++ G PD +Y IL+ FC
Sbjct: 142 -YCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLE 200
Query: 282 GNMNGA----FKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPS 337
G + A + +F + KG D V Y L+D L +DA +I +L+ +
Sbjct: 201 GKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAP 260
Query: 338 FAVYKALMT--WLCRGKKISLAFSLYLEYL--KSLPGRDNDSINALEEYFMKGEVERAIR 393
Y + W + I L E L ++P D+ S A + F +G++
Sbjct: 261 KRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMAT-DLFEEGKLVEGEE 319
Query: 394 GLLELDFRFRDFNLAP--YSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVH--LI 449
LL + R + F P Y + C+A K+ EA+ + + + + PT V+ LI
Sbjct: 320 VLLAM--RSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINK-EMMQGHCLPTVGVYNVLI 376
Query: 450 SGLCAKRNLYDAV 462
GLC +AV
Sbjct: 377 KGLCDDGKSMEAV 389
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 98/197 (49%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D+ ++N L+ C++ L EAV+LL +E G + +++L+ + ++ ++
Sbjct: 179 DIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIW 238
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
+M++ + D+ Y L GL+NE + E V +F E+ GL PD +NA+I+G +
Sbjct: 239 AKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINE 298
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
G++D A + + EI H D T +L+ MCK G A E+F + T
Sbjct: 299 GKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTL 358
Query: 189 NALINGLCKAGKLDEAH 205
L++ L K K +EA
Sbjct: 359 QQLVDELVKGSKREEAE 375
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 131/312 (41%), Gaps = 51/312 (16%)
Query: 16 LLNGFCKQGKLEEAVSLLR-LLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMI-K 73
+++ + K G E A + + RD + LS +++L+ + +++++ L+ + K
Sbjct: 115 IISLYGKAGMFENAQKVFEEMPNRDCKRSVLS-FNALLSAYRLSKKFDVVEELFNELPGK 173
Query: 74 GGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDH 133
I PD++ Y +++ L + + EAV + E+ +GL PD +N ++ GQ +
Sbjct: 174 LSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFEL 233
Query: 134 ARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALIN 193
+ ++ + D T+ + + + +E +F +++ G P +FNA+I
Sbjct: 234 GEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIR 293
Query: 194 GLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAY 253
G GK+DEA + ++ V+H
Sbjct: 294 GSINEGKMDEAEAWYKEI----------------------------VKH----------- 314
Query: 254 KLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGL 313
G PD T+ +L+ + CKAG+ A +LFK+ K T L+D L
Sbjct: 315 ---------GYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDEL 365
Query: 314 YRVEREEDAFKI 325
+ + E+A +I
Sbjct: 366 VKGSKREEAEEI 377
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 104/247 (42%), Gaps = 20/247 (8%)
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILIC--EMCKKGMVREAQEMFNQME- 177
II + G ++A+ + E+ D + L+ + KK V E E+FN++
Sbjct: 115 IISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVE--ELFNELPG 172
Query: 178 KLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKME-IGKSPSLFFRLAQGSDHVSDSVSL 236
KL P V++N LI LC+ L EA L ++E G P + +++ L
Sbjct: 173 KLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIV---------TFNTLLL 223
Query: 237 QKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQL 296
++ E G+ + A ++ + V DI+TYN + LF +L+
Sbjct: 224 SSYLKGQFELGEEIWA-----KMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKA 278
Query: 297 KGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISL 356
GL PD ++ +I G + ++A ++KH P A + L+ +C+
Sbjct: 279 SGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFES 338
Query: 357 AFSLYLE 363
A L+ E
Sbjct: 339 AIELFKE 345
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 82/393 (20%), Positives = 147/393 (37%), Gaps = 57/393 (14%)
Query: 45 LSGYSSLIDGFFKA---RRYNEAHSLYGR--MIKGGILPDVILYAIMLRGLSNEGRVGEA 99
+S S ++ G F RR++ A ++ + I P ++ G N R+ E
Sbjct: 1 MSSLSRVLRGTFNTCPIRRFSSAATVVSEPTAVTAAISPPQKSLTSLVNGERNPKRIVEK 60
Query: 100 VKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICE 159
K E + Y+ ++ +L + + E + + +I
Sbjct: 61 FKKACE--SERFRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISL 118
Query: 160 MCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSL 219
K GM AQ++F +M C S ++FNAL++
Sbjct: 119 YGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSA------------------------- 153
Query: 220 FFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADS-GVVPDIKTYNILINSF 278
+RL++ D V + L +L + PDI +YN LI +
Sbjct: 154 -YRLSKKFDVVEE----------------------LFNELPGKLSIKPDIVSYNTLIKAL 190
Query: 279 CKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSF 338
C+ ++ A L +++ KGL PD VT+ TL+ Y + E +I M++
Sbjct: 191 CEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDI 250
Query: 339 AVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINAL-EEYFMKGEVERAIRGLLE 397
Y A + L K +L+ E S D S NA+ +G+++ A E
Sbjct: 251 RTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKE 310
Query: 398 LDFRFRDFNLAPYSILLIGFCQAKKVDEALIIF 430
+ + A +++LL C+A + A+ +F
Sbjct: 311 IVKHGYRPDKATFALLLPAMCKAGDFESAIELF 343
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 156/342 (45%), Gaps = 38/342 (11%)
Query: 11 ATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRL----SGYSSLIDGFFKARRYNEAHS 66
++N +++G CK G A LL +G Y L++ K +A +
Sbjct: 343 TSYNAIIHGLCKDGGCMRAYQLLE----EGSEFEFFPSEYTYKLLMESLCKELDTGKARN 398
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
+ M++ +Y I LRGL E + + M+Q PD + N +I G C
Sbjct: 399 VLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLC 458
Query: 127 DIGQLDHA-RSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQ-MEKLGCFPS 184
+G++D A + L ++G D T ++C + +G EA ++ N+ M + P
Sbjct: 459 KMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPG 518
Query: 185 AVTFNALINGLCKAGKLDEAHLLFYKMEIGK--SPSLFFRLAQGSDHVSDSVSLQKK--- 239
V +NA+I GL K K DEA +F ++E + S + + V++ V + KK
Sbjct: 519 VVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWD 578
Query: 240 -----------------VEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAG 282
++ +C++G +A L LADSG +P++ YN +I ++G
Sbjct: 579 DVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSG 638
Query: 283 NMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLY-----RVERE 319
A+++ ++++ G +PD+VT+ ++D L+ VERE
Sbjct: 639 LKREAYQILEEMRKNGQAPDAVTW-RILDKLHDSMDLTVERE 679
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 94/184 (51%), Gaps = 1/184 (0%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLL-RLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSL 67
D T N ++ G QG+ EEA+ +L R++ + + Y+++I G FK + +EA S+
Sbjct: 482 DAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSV 541
Query: 68 YGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCD 127
+G++ K + D YAI++ GL +V A K + ++I DA Y A +KG C
Sbjct: 542 FGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQ 601
Query: 128 IGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVT 187
G L A +++ + + + +I E + G+ REA ++ +M K G P AVT
Sbjct: 602 SGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVT 661
Query: 188 FNAL 191
+ L
Sbjct: 662 WRIL 665
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 147/354 (41%), Gaps = 25/354 (7%)
Query: 11 ATFNVLLNGFCKQG------KLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEA 64
A F L++ C++G ++ E +SL + + Y +ID + RR + A
Sbjct: 273 AAFANLVDSMCREGYFNDIFEIAENMSLCESVNVE------FAYGHMIDSLCRYRRNHGA 326
Query: 65 HSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKG 124
+ M G+ P Y ++ GL +G A ++ E + P + Y +++
Sbjct: 327 ARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMES 386
Query: 125 FCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPS 184
C AR++ + +G T + I + +C E + M + C P
Sbjct: 387 LCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPD 446
Query: 185 AVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMC 244
T N +INGLCK G++D+A + M GK + D+V+L + +
Sbjct: 447 EYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCA------------PDAVTLNTVMCGLL 494
Query: 245 EAGQTLNAYKLLTQ-LADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDS 303
G+ A +L + + ++ + P + YN +I K + A +F L+ ++ DS
Sbjct: 495 AQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADS 554
Query: 304 VTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLA 357
TY +IDGL + + A K D ++ VY A + LC+ +S A
Sbjct: 555 TTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDA 608
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 121/554 (21%), Positives = 223/554 (40%), Gaps = 77/554 (13%)
Query: 4 RRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGY-------SSLIDGFF 56
RR D A + ++ C + + LR+L+ G+ L GY SS+I
Sbjct: 48 RRSVTDRAYWRRRIHSICAVRRNPDEA--LRILD----GLCLRGYRPDSLNLSSVIHSLC 101
Query: 57 KARRYNEAHSLYGRMIKGGILPDV----ILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLL 112
A R++EAH + + G +PD ++ A +L S +G ++ ++ +
Sbjct: 102 DAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIG--FKKEFV 159
Query: 113 PDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEM 172
P YN ++ C I ++ A L ++ L D T T LI C+ + A ++
Sbjct: 160 PSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKV 219
Query: 173 FNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSD 232
F++M G P+++T + LI G K ++ L + L+ + +D
Sbjct: 220 FDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKE--------LWEYMKNETDTSMK 271
Query: 233 SVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFK 292
+ + V+ MC G + +++ ++ V Y +I+S C+ +GA ++
Sbjct: 272 AAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVY 331
Query: 293 DLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGK 352
++ KGL P +Y +I GL + A+++ + + PS YK LM LC+
Sbjct: 332 IMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKEL 391
Query: 353 KISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSI 412
A ++ LE + G D I Y+I
Sbjct: 392 DTGKARNV-LELMLRKEGADRTRI---------------------------------YNI 417
Query: 413 LLIGFCQAKKVDEAL-IIFSVL------DEFNININPTSCVHLISGLCAKRNLYDAVVIF 465
L G C E L ++ S+L DE+ +N +I+GLC + DA+ +
Sbjct: 418 YLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNT-------VINGLCKMGRVDDAMKVL 470
Query: 466 LYSLDKGFELGPKICKELLECLLVSQDKRKYAIDLIGR-MKSRGYRLHKYQYRQTISLLQ 524
+ F + + C L++Q + + A+D++ R M + Y I L
Sbjct: 471 DDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLF 530
Query: 525 QLQEG-KAVKLFSE 537
+L +G +A+ +F +
Sbjct: 531 KLHKGDEAMSVFGQ 544
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/450 (21%), Positives = 175/450 (38%), Gaps = 87/450 (19%)
Query: 45 LSGYSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFA 104
L+ Y+ L++ R +AH L M G LPDV+ + ++ G + A K+F
Sbjct: 162 LTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFD 221
Query: 105 EMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGH-----DGLHDTCTHTILICE 159
EM G+ P++ + +I GF + ++ R L E+ + D L+
Sbjct: 222 EMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDS 281
Query: 160 MCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSL 219
MC++G + E+ M + +I+ LC+ + A + Y M KS L
Sbjct: 282 MCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIM---KSKGL 338
Query: 220 FFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFC 279
R S + +C+ G + AY+LL + ++ P TY +L+ S C
Sbjct: 339 KPR----------RTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLC 388
Query: 280 KAGNMNGAFKLFK--------------DLQLKGL---------------------SPDSV 304
K + A + + ++ L+GL PD
Sbjct: 389 KELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEY 448
Query: 305 TYGTLIDGLYRVEREEDAFKIRDHMLK-HVCEPSFAVYKALMTWLCRGKKISLAFSLYLE 363
T T+I+GL ++ R +DA K+ D M+ C P +M L LA
Sbjct: 449 TLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGL-------LA------ 495
Query: 364 YLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKV 423
GR ++++ L + +++ + Y+ ++ G + K
Sbjct: 496 -----QGRAEEALDVLNRVMPENKIKPGV---------------VAYNAVIRGLFKLHKG 535
Query: 424 DEALIIFSVLDEFNININPTSCVHLISGLC 453
DEA+ +F L++ ++ + T+ +I GLC
Sbjct: 536 DEAMSVFGQLEKASVTADSTTYAIIIDGLC 565
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 114/237 (48%), Gaps = 7/237 (2%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLR-LLERDGRGIRLSGYSSLIDGFFKARRYNEAHSL 67
D T N ++NG CK G++++A+ +L ++ ++++ G R EA +
Sbjct: 446 DEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDV 505
Query: 68 YGR-MIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
R M + I P V+ Y ++RGL + EA+ +F ++ + + D+ Y II G C
Sbjct: 506 LNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLC 565
Query: 127 DIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAV 186
++D A+ ++ G HD + + +C+ G + +A + G P+ V
Sbjct: 566 VTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVV 625
Query: 187 TFNALINGLCKAGKLDEAHLLFYKM-EIGKSP-SLFFRLAQGSDHVSDSVSLQKKVE 241
+N +I ++G EA+ + +M + G++P ++ +R+ D + DS+ L + E
Sbjct: 626 CYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRIL---DKLHDSMDLTVERE 679
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/357 (20%), Positives = 136/357 (38%), Gaps = 20/357 (5%)
Query: 12 TFNVLLNGFCKQGKLEEAVSLLRLL-----ERDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
T +VL+ GF K +E L++ L ++ + +++L+D + +N+
Sbjct: 234 TLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFE 293
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
+ M + Y M+ L R A ++ M +GL P YNAII G C
Sbjct: 294 IAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLC 353
Query: 127 DIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAV 186
G A L E S + T+ +L+ +CK+ +A+ + M +
Sbjct: 354 KDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTR 413
Query: 187 TFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEA 246
+N + GLC E + M G D D +L + +C+
Sbjct: 414 IYNIYLRGLCVMDNPTEILNVLVSMLQG-------------DCRPDEYTLNTVINGLCKM 460
Query: 247 GQTLNAYKLLTQLADSG-VVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKG-LSPDSV 304
G+ +A K+L + PD T N ++ G A + + + + P V
Sbjct: 461 GRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVV 520
Query: 305 TYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLY 361
Y +I GL+++ + ++A + + K Y ++ LC K+ +A +
Sbjct: 521 AYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFW 577
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 141/312 (45%), Gaps = 24/312 (7%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSS------LIDGFFKARRYN 62
+L VLL+ CK+G + EA LER G + + S L++G+F++R+
Sbjct: 211 ELRLLEVLLDALCKEGHVREAS---MYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLK 267
Query: 63 EAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAII 122
+A L+ M + P V+ Y ++ G RV A+++ EM + + +N II
Sbjct: 268 QAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPII 327
Query: 123 KGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCF 182
G + G+L A + + T+ L+ CK G + A ++ M G
Sbjct: 328 DGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVD 387
Query: 183 PSAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVE 241
P+ T+N K K +E L++K+ E G SP D ++ ++
Sbjct: 388 PTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSP--------------DRLTYHLILK 433
Query: 242 HMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSP 301
+CE G+ A ++ ++ + G+ PD+ T +LI+ C+ + AF+ F + +G+ P
Sbjct: 434 MLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIP 493
Query: 302 DSVTYGTLIDGL 313
+T+ + +GL
Sbjct: 494 QYITFKMIDNGL 505
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M M + + FN +++G + G+L EA+ ++ G + Y+SL+ F KA
Sbjct: 311 MKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGD 370
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
A + M+ G+ P Y + S + E + ++ ++I+ G PD Y+
Sbjct: 371 LPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHL 430
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
I+K C+ G+L A ++ E+ D T T+LI +C+ M+ EA E F+ + G
Sbjct: 431 ILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRG 490
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLL 207
P +TF + NGL G D A L
Sbjct: 491 IIPQYITFKMIDNGLRSKGMSDMAKRL 517
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 147/374 (39%), Gaps = 70/374 (18%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
F + F+ ++N CK + E A SL+ R G L + I RRY A
Sbjct: 131 FTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFI---VLIRRYARAG 187
Query: 66 SL------------YGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMI----QR 109
+ Y + K ++ L ++L L EG V EA M+ E I
Sbjct: 188 MVQQAIRAFEFARSYEPVCKSAT--ELRLLEVLLDALCKEGHVREA-SMYLERIGGTMDS 244
Query: 110 GLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREA 169
+P +N ++ G+ +L A L E+ + T+ LI C+ V+ A
Sbjct: 245 NWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIA 304
Query: 170 QEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDH 229
E+ +M+ + + FN +I+GL +AG+L EA + + FF
Sbjct: 305 MEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMER---------FF-------- 347
Query: 230 VSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFK 289
+CE+G P I TYN L+ +FCKAG++ GA K
Sbjct: 348 -------------VCESG------------------PTIVTYNSLVKNFCKAGDLPGASK 376
Query: 290 LFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLC 349
+ K + +G+ P + TY + + E+ + +++ P Y ++ LC
Sbjct: 377 ILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLC 436
Query: 350 RGKKISLAFSLYLE 363
K+SLA + E
Sbjct: 437 EDGKLSLAMQVNKE 450
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 150/373 (40%), Gaps = 54/373 (14%)
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
SL + + GI P V L + LS+ + +V +AEM + G +++++
Sbjct: 87 SLESALDETGIEPSVELVHALFDRLSSSPMLLHSVFKWAEM-KPGFTLSPSLFDSVVNSL 145
Query: 126 CDIGQLDHARSL---HVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCF 182
C + + A SL V L T +LI + GMV++A F
Sbjct: 146 CKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFARSYEPV 205
Query: 183 PSAVT----FNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQK 238
+ T L++ LCK G + EA + ++
Sbjct: 206 CKSATELRLLEVLLDALCKEGHVREASMYLERI--------------------------- 238
Query: 239 KVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKG 298
G T+ DS VP ++ +NIL+N + ++ + A KL+++++
Sbjct: 239 --------GGTM----------DSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMN 280
Query: 299 LSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAF 358
+ P VTYGTLI+G R+ R + A ++ + M E +F V+ ++ L ++S A
Sbjct: 281 VKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEAL 340
Query: 359 SLYLEYLKSLPGRDNDSINALEEYFMK-GEVERAIRGLLELDFRFRDFNLAPYSILLIGF 417
+ + G + N+L + F K G++ A + L + R D Y+ F
Sbjct: 341 GMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYF 400
Query: 418 CQAKKVDEALIIF 430
+ K +E + ++
Sbjct: 401 SKHNKTEEGMNLY 413
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 151/336 (44%), Gaps = 27/336 (8%)
Query: 1 MW-----MRRFQRDLA--TFNVLLNGFCKQGKLEEAVSLLRLLERD-GRGIRLSGYSSLI 52
MW M+ D++ T ++ + K G +++AV L + + G + Y+SL+
Sbjct: 130 MWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLL 189
Query: 53 DGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLL 112
+ ++ A++L RMI+ G+ PD YAI++ G + G++ EA + EM +RG
Sbjct: 190 HALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFN 249
Query: 113 PDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEM 172
P A + +I+G + G L+ A+ + +++ + D T ILI + K G V EM
Sbjct: 250 PPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEM 309
Query: 173 FNQMEKLGCFPSAVTFNALINGLCKAGKLDEA-HLLFYKMEIGKS--PSLFFRLAQGSDH 229
+ KLG T+ LI + K GK+DEA LL +E G PSL+ + +G
Sbjct: 310 YYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKG--- 366
Query: 230 VSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFK 289
MC G +A+ + + P+ Y +LI + G A
Sbjct: 367 -------------MCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAAN 413
Query: 290 LFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKI 325
++ GL P S + + DGL + + A +I
Sbjct: 414 YLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMRI 449
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 137/308 (44%), Gaps = 25/308 (8%)
Query: 55 FFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPD 114
FF R N +++ P + Y + + L++ + K+ +M L
Sbjct: 97 FFNWARSNPSYT-----------PTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDIS 145
Query: 115 AHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTC-THTILICEMCKKGMVREAQEMF 173
II+ + G +D A L + G T + L+ +C M A +
Sbjct: 146 GETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALI 205
Query: 174 NQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDS 233
+M + G P T+ L+NG C AGK+ EA +M S F A+G D +
Sbjct: 206 RRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEM----SRRGFNPPARGRDLL--- 258
Query: 234 VSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKD 293
+E + AG +A ++++++ G VPDI+T+NILI + K+G + +++
Sbjct: 259 ------IEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYT 312
Query: 294 LQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKK 353
GL D TY TLI + ++ + ++AF++ ++ ++ +P ++Y ++ +CR
Sbjct: 313 ACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGM 372
Query: 354 ISLAFSLY 361
AFS +
Sbjct: 373 FDDAFSFF 380
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 115/271 (42%), Gaps = 14/271 (5%)
Query: 94 GRVGEAVKMFAEMIQR-GLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCT 152
G V +AV++F + + G YN+++ CD+ A +L + D T
Sbjct: 160 GHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRT 219
Query: 153 HTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKME 212
+ IL+ C G ++EAQE ++M + G P A + LI GL AG L+ A + KM
Sbjct: 220 YAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMT 279
Query: 213 IGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYN 272
G V D + +E + ++G+ ++ G+ DI TY
Sbjct: 280 KG-------------GFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYK 326
Query: 273 ILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKH 332
LI + K G ++ AF+L + G P Y +I G+ R +DAF M
Sbjct: 327 TLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVK 386
Query: 333 VCEPSFAVYKALMTWLCRGKKISLAFSLYLE 363
P+ VY L+T RG K A + +E
Sbjct: 387 AHPPNRPVYTMLITMCGRGGKFVDAANYLVE 417
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 131/295 (44%), Gaps = 16/295 (5%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
Q+ + +N LL+ C A +L+R + R G Y+ L++G+ A + EA
Sbjct: 179 QQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQE 238
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
M + G P +++ GL N G + A +M ++M + G +PD +N +I+
Sbjct: 239 FLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAIS 298
Query: 127 DIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAV 186
G+++ ++ D T+ LI + K G + EA + N + G P
Sbjct: 299 KSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPS 358
Query: 187 TFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMC-E 245
+ +I G+C+ G D+A F M++ P + + + MC
Sbjct: 359 LYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPP--------------NRPVYTMLITMCGR 404
Query: 246 AGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFK-DLQLKGL 299
G+ ++A L ++ + G+VP + ++++ + G + A ++ + ++QL+G+
Sbjct: 405 GGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMRIEQLEVQLRGV 459
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/336 (20%), Positives = 114/336 (33%), Gaps = 90/336 (26%)
Query: 131 LDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEK-LGCFPSAVTFN 189
L + L ++ISG T +I + K G V +A E+FN + K LGC + +N
Sbjct: 134 LKQMKDLSLDISGE-------TLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYN 186
Query: 190 ALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQT 249
+L++ L C+
Sbjct: 187 SLLHAL------------------------------------------------CDVKMF 198
Query: 250 LNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTL 309
AY L+ ++ G+ PD +TY IL+N +C AG M A + ++ +G +P + L
Sbjct: 199 HGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLL 258
Query: 310 IDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLP 369
I+GL E A ++ M K P + L+ + + ++ +Y K
Sbjct: 259 IEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGL 318
Query: 370 GRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALII 429
D D+ Y L+ + K+DEA +
Sbjct: 319 CVDIDT----------------------------------YKTLIPAVSKIGKIDEAFRL 344
Query: 430 FSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIF 465
+ E P+ +I G+C DA F
Sbjct: 345 LNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFF 380
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 106/207 (51%), Gaps = 2/207 (0%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
F D+ T+N+LL + GK++ L + RDG Y+ L+ K + A
Sbjct: 250 FSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAAL 309
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFA-EMIQRGLLPDAHCYNAIIKG 124
+ M + GI P V+ Y ++ GLS G + EA K F EM++ G PD CY +I G
Sbjct: 310 TTLNHMKEVGIDPSVLHYTTLIDGLSRAGNL-EACKYFLDEMVKAGCRPDVVCYTVMITG 368
Query: 125 FCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPS 184
+ G+LD A+ + E++ L + T+ +I +C G REA + +ME GC P+
Sbjct: 369 YVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPN 428
Query: 185 AVTFNALINGLCKAGKLDEAHLLFYKM 211
V ++ L++ L KAGKL EA + +M
Sbjct: 429 FVVYSTLVSYLRKAGKLSEARKVIREM 455
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 149/314 (47%), Gaps = 35/314 (11%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAV-SLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEA 64
F TFN+L+ + G ++AV ++ + R + S Y+++++ ++Y
Sbjct: 180 FPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHS-YNAILNSLLGVKQYKLI 238
Query: 65 HSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAII-- 122
+Y +M++ G PDV+ Y I+L G++ ++F EM + G PD++ YN ++
Sbjct: 239 EWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHI 298
Query: 123 -----KGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQME 177
K + L+H + + ++ S LH +T LI + + G + + ++M
Sbjct: 299 LGKGNKPLAALTTLNHMKEVGIDPSV---LH----YTTLIDGLSRAGNLEACKYFLDEMV 351
Query: 178 KLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEI-GKSPSLFFRLAQGSDHVSDSVSL 236
K GC P V + +I G +G+LD+A +F +M + G+ P++F +
Sbjct: 352 KAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVF--------------TY 397
Query: 237 QKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQL 296
+ +C AG+ A LL ++ G P+ Y+ L++ KAG ++ A K+ +++
Sbjct: 398 NSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVK 457
Query: 297 KG----LSPDSVTY 306
KG L P + Y
Sbjct: 458 KGHYVHLVPKMMKY 471
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 138/323 (42%), Gaps = 15/323 (4%)
Query: 45 LSGYSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFA 104
++ Y L+ F + Y L M++ G + +++ G +AV F
Sbjct: 149 VNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFM 208
Query: 105 EMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKG 164
+ P H YNAI+ + Q ++ ++ D T+ IL+ + G
Sbjct: 209 KSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLG 268
Query: 165 MVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGK-LDEAHLLFYKMEIGKSPSLFFRL 223
+ +F++M + G P + T+N L++ L K K L L + E+G PS+
Sbjct: 269 KMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSV---- 324
Query: 224 AQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGN 283
+ ++ + AG L ++ +G PD+ Y ++I + +G
Sbjct: 325 ----------LHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGE 374
Query: 284 MNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKA 343
++ A ++F+++ +KG P+ TY ++I GL +A + M C P+F VY
Sbjct: 375 LDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYST 434
Query: 344 LMTWLCRGKKISLAFSLYLEYLK 366
L+++L + K+S A + E +K
Sbjct: 435 LVSYLRKAGKLSEARKVIREMVK 457
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 143/371 (38%), Gaps = 53/371 (14%)
Query: 115 AHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTC-THTILICEMCKKGMVREAQEMF 173
+ Y+ ++K F + G+ L E+ DG T T +LIC + G+ ++A F
Sbjct: 149 VNSYHLLMKIFAECGEYKAMWRLVDEMV-QDGFPTTARTFNLLICSCGEAGLAKQAVVQF 207
Query: 174 NQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSD 232
+ + P ++NA++N L + ++ +M E G SP D ++
Sbjct: 208 MKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSP----------DVLTY 257
Query: 233 SVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFK 292
++ L G+ +L ++A G PD TYNIL++ K A
Sbjct: 258 NILLWTNYR----LGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLN 313
Query: 293 DLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGK 352
++ G+ P + Y TLIDGL R E D M+K C P Y ++T
Sbjct: 314 HMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMIT------ 367
Query: 353 KISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSI 412
Y + GE+++A E+ + + N+ Y+
Sbjct: 368 ----------------------------GYVVSGELDKAKEMFREMTVKGQLPNVFTYNS 399
Query: 413 LLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKG 472
++ G C A + EA + ++ N N L+S L L +A + + KG
Sbjct: 400 MIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Query: 473 --FELGPKICK 481
L PK+ K
Sbjct: 460 HYVHLVPKMMK 470
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 152/336 (45%), Gaps = 25/336 (7%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R QR + + N LL+ K G+LE+ L ++ G+ + Y+ LI G ++
Sbjct: 109 MPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSSIDEFGKPDACT-YNILIHGCSQSGC 167
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQ-RGLLPDAHCYN 119
+++A L+ M+K + P + + ++ GL + RV EA+KM +M++ G+ P H Y
Sbjct: 168 FDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYA 227
Query: 120 AIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKL 179
++IK C IG+L A L E D ++ LI + K G E + +M +
Sbjct: 228 SLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEK 287
Query: 180 GCFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSL---------FFRLAQGSDH 229
GC P VT+N LING C + A+ + +M E G P + FFR+ + +
Sbjct: 288 GCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEA 347
Query: 230 V------------SDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINS 277
D++S + + +CE Q A +L ++ G P +
Sbjct: 348 TYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQK 407
Query: 278 FCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGL 313
C++G + K+ L +G++ D+ + +I +
Sbjct: 408 LCESGKLEILSKVISSLH-RGIAGDADVWSVMIPTM 442
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 137/301 (45%), Gaps = 28/301 (9%)
Query: 76 ILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHAR 135
I+P I++ ++ A+ MF EM Q N+++ G+L+ +
Sbjct: 79 IVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMK 138
Query: 136 SLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGL 195
I G D CT+ ILI + G +A ++F++M K P+ VTF LI+GL
Sbjct: 139 ERLSSIDEF-GKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGL 197
Query: 196 CKAGKLDEAHLLFYKM---------------------EIGKSPSLFFRLA----QGSDHV 230
CK ++ EA + + M +IG+ S F+L +G V
Sbjct: 198 CKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGEL-SFAFKLKDEAYEGKIKV 256
Query: 231 SDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKL 290
D+ + + +AG++ +L ++++ G PD TYN+LIN FC + A ++
Sbjct: 257 -DAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRV 315
Query: 291 FKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCR 350
++ KGL PD ++Y ++ +R+++ E+A + + M + C P Y+ + LC
Sbjct: 316 LDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCE 375
Query: 351 G 351
G
Sbjct: 376 G 376
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 134/281 (47%), Gaps = 16/281 (5%)
Query: 78 PDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSL 137
PD Y I++ G S G +A+K+F EM+++ + P + +I G C ++ A +
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 138 HVEISGHDGLHDTC-THTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLC 196
++ G+ T + LI +C+ G + A ++ ++ + A ++ LI+ L
Sbjct: 210 KHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLI 269
Query: 197 KAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKL 255
KAG+ +E ++ +M E G P D+V+ + C + +A ++
Sbjct: 270 KAGRSNEVSMILEEMSEKGCKP--------------DTVTYNVLINGFCVENDSESANRV 315
Query: 256 LTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYR 315
L ++ + G+ PD+ +YN+++ F + A LF+D+ +G SPD+++Y + DGL
Sbjct: 316 LDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCE 375
Query: 316 VEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISL 356
+ E+A I D ML +P + + LC K+ +
Sbjct: 376 GLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEI 416
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 113/246 (45%), Gaps = 37/246 (15%)
Query: 266 PDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKI 325
PD TYNILI+ ++G + A KLF ++ K + P VT+GTLI GL + R ++A K+
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 326 RDHMLK-HVCEPSFAVYKALMTWLCRGKKISLAFSL---------------YLEYLKSL- 368
+ MLK + P+ +Y +L+ LC+ ++S AF L Y + SL
Sbjct: 210 KHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLI 269
Query: 369 -PGRDNDSINALEEYFMKG-------------------EVERAIRGLLELDFRFRDFNLA 408
GR N+ LEE KG + E A R L E+ + ++
Sbjct: 270 KAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVI 329
Query: 409 PYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYS 468
Y+++L F + KK +EA +F + + + S + GLC +A VI
Sbjct: 330 SYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEM 389
Query: 469 LDKGFE 474
L KG++
Sbjct: 390 LFKGYK 395
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 84/171 (49%), Gaps = 9/171 (5%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
+ D T+NVL+NGFC + E A +L + G + Y+ ++ FF+ +++ EA
Sbjct: 290 KPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATY 349
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
L+ M + G PD + Y I+ GL + EA + EM+ +G P ++ C
Sbjct: 350 LFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLC 409
Query: 127 DIGQLD----HARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMF 173
+ G+L+ SLH I+G D +++I MCK+ ++ ++ ++
Sbjct: 410 ESGKLEILSKVISSLHRGIAG-----DADVWSVMIPTMCKEPVISDSIDLL 455
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 145/354 (40%), Gaps = 51/354 (14%)
Query: 12 TFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRM 71
TF ++ + + K++EA+ +E G + S ++ ++D K+R +A ++ +M
Sbjct: 164 TFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKM 223
Query: 72 IKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQL 131
K PD+ Y I+L G E + ++ EM G PD Y II
Sbjct: 224 KKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAH------ 277
Query: 132 DHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNAL 191
CK EA FN+ME+ C PS F +L
Sbjct: 278 -----------------------------CKAKKYEEAIRFFNEMEQRNCKPSPHIFCSL 308
Query: 192 INGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLN 251
INGL KL++A +E FF ++ S ++ + V C + + +
Sbjct: 309 INGLGSEKKLNDA------LE-------FFERSKSSGFPLEAPTYNALVGAYCWSQRMED 355
Query: 252 AYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLID 311
AYK + ++ GV P+ +TY+I+++ + A++++ Q P TY ++
Sbjct: 356 AYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVY---QTMSCEPTVSTYEIMVR 412
Query: 312 GLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYL 365
ER + A KI D M P ++ +L+T LC K+ A + E L
Sbjct: 413 MFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEML 466
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 121/275 (44%), Gaps = 41/275 (14%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M +RF+ D+ ++ +LL G+ ++ L + R ++ +G + Y +I+ KA++
Sbjct: 223 MKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKK 282
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
Y EA + M + P ++ ++ GL +E ++ +A++ F G +A YNA
Sbjct: 283 YEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNA 342
Query: 121 IIKGFCDIGQLDHARSLHVEIS----GHDG------LH---------------------- 148
++ +C +++ A E+ G + LH
Sbjct: 343 LVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCEP 402
Query: 149 DTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLF 208
T+ I++ C K + A +++++M+ G P F++LI LC KLDEA F
Sbjct: 403 TVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYF 462
Query: 209 YKM-EIGKSPS--LFFRLAQG------SDHVSDSV 234
+M ++G P +F RL Q D V+D V
Sbjct: 463 NEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLV 497
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/309 (20%), Positives = 129/309 (41%), Gaps = 18/309 (5%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
F+ + + FN +L+ K + +A + +++ + Y+ L++G+ +
Sbjct: 193 FKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVD 252
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
+ M G PDV+ Y I++ + EA++ F EM QR P H + ++I G
Sbjct: 253 EVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGL 312
Query: 126 CDIGQLDHARSLHVEISGHDGLH-DTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPS 184
+L+ A E S G + T+ L+ C + +A + ++M G P+
Sbjct: 313 GSEKKLNDALEF-FERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPN 371
Query: 185 AVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMC 244
A T++ +++ L + + EA+ ++ M + S + + V C
Sbjct: 372 ARTYDIILHHLIRMQRSKEAYEVYQTMSCEPTVSTY----------------EIMVRMFC 415
Query: 245 EAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSV 304
+ A K+ ++ GV+P + ++ LI + C ++ A + F ++ G+ P
Sbjct: 416 NKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGH 475
Query: 305 TYGTLIDGL 313
+ L L
Sbjct: 476 MFSRLKQTL 484
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 89/200 (44%), Gaps = 3/200 (1%)
Query: 13 FNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMI 72
F L+NG + KL +A+ + G + Y++L+ + ++R +A+ M
Sbjct: 305 FCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMR 364
Query: 73 KGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLD 132
G+ P+ Y I+L L R EA +++ M P Y +++ FC+ +LD
Sbjct: 365 LKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLD 421
Query: 133 HARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALI 192
A + E+ G L + LI +C + + EA E FN+M +G P F+ L
Sbjct: 422 MAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLK 481
Query: 193 NGLCKAGKLDEAHLLFYKME 212
L G+ D+ L KM+
Sbjct: 482 QTLLDEGRKDKVTDLVVKMD 501
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 98/452 (21%), Positives = 182/452 (40%), Gaps = 61/452 (13%)
Query: 86 MLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHD 145
+L+ LSN G + +V +AE Q+G YNA+I+ I Q SL ++
Sbjct: 100 VLKKLSNAGVLALSVFKWAEN-QKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKK 158
Query: 146 GLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAH 205
L T ++ + V+EA F++ME+ G + FN +++ L K
Sbjct: 159 LLSKE-TFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSK-------- 209
Query: 206 LLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVV 265
S +V D A K+ ++
Sbjct: 210 ---------------------SRNVGD-------------------AQKVFDKMKKKRFE 229
Query: 266 PDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKI 325
PDIK+Y IL+ + + N+ ++ ++++ +G PD V YG +I+ + ++ E+A +
Sbjct: 230 PDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRF 289
Query: 326 RDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINAL-EEYFM 384
+ M + C+PS ++ +L+ L KK++ A + S + + NAL Y
Sbjct: 290 FNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCW 349
Query: 385 KGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTS 444
+E A + + E+ + N Y I+L + ++ EA ++ + + PT
Sbjct: 350 SQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM-----SCEPTV 404
Query: 445 CVH--LISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKELLECLLVSQDKRKYAIDLIG 502
+ ++ C K L A+ I+ KG G + L+ L ++K A +
Sbjct: 405 STYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITA-LCHENKLDEACEYFN 463
Query: 503 RMKSRGYRLHKYQYRQTISLLQQLQEGKAVKL 534
M G R + + + L L EG+ K+
Sbjct: 464 EMLDVGIRPPGHMFSRLKQTL--LDEGRKDKV 493
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 71/168 (42%), Gaps = 32/168 (19%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
F + T+N L+ +C ++E+A + + G G Y ++ + +R EA+
Sbjct: 333 FPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAY 392
Query: 66 SLYGRM-------------------------------IKG-GILPDVILYAIMLRGLSNE 93
+Y M +KG G+LP + +++ ++ L +E
Sbjct: 393 EVYQTMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHE 452
Query: 94 GRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEI 141
++ EA + F EM+ G+ P H ++ + + D G+ D L V++
Sbjct: 453 NKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKM 500
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 95/195 (48%), Gaps = 13/195 (6%)
Query: 155 ILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIG 214
IL + +G +++A E+F G P+ ++N L+ C L A+ LF KM
Sbjct: 160 ILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKM--- 216
Query: 215 KSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNIL 274
D V D S + ++ C GQ A +LL + + G VPD +Y L
Sbjct: 217 ----------LERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTL 266
Query: 275 INSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVC 334
+NS C+ + A+KL ++LKG +PD V Y T+I G R +R DA K+ D ML + C
Sbjct: 267 LNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGC 326
Query: 335 EPSFAVYKALMTWLC 349
P+ Y+ L+ LC
Sbjct: 327 SPNSVSYRTLIGGLC 341
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 122/262 (46%), Gaps = 16/262 (6%)
Query: 51 LIDGFFKARRY-NEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQR 109
++D R Y +A L+ G++P+ Y ++++ + A ++F +M++R
Sbjct: 160 ILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLER 219
Query: 110 GLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREA 169
++PD Y +I+GFC GQ++ A L ++ + D ++T L+ +C+K +REA
Sbjct: 220 DVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREA 279
Query: 170 QEMFNQMEKLGCFPSAVTFNALINGLCKAGK-LDEAHLLFYKMEIGKSPSLFFRLAQGSD 228
++ +M+ GC P V +N +I G C+ + +D +L + G SP
Sbjct: 280 YKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSP----------- 328
Query: 229 HVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAF 288
+SVS + + +C+ G K L ++ G P N L+ FC G + A
Sbjct: 329 ---NSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEAC 385
Query: 289 KLFKDLQLKGLSPDSVTYGTLI 310
+ + + G + S T+ +I
Sbjct: 386 DVVEVVMKNGETLHSDTWEMVI 407
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 136/295 (46%), Gaps = 18/295 (6%)
Query: 42 GIRLSG--YSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVI-LYAIMLRGLSNEGRVGE 98
G L+G ++ LI + +A+ + S + +M++ P L I+ +S+ G + +
Sbjct: 114 GYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQK 173
Query: 99 AVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILIC 158
A ++F G++P+ YN +++ FC L A L ++ D + D ++ ILI
Sbjct: 174 AFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQ 233
Query: 159 EMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEI-GKSP 217
C+KG V A E+ + M G P +++ L+N LC+ +L EA+ L +M++ G +P
Sbjct: 234 GFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNP 293
Query: 218 SLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINS 277
L V + C + ++A K+L + +G P+ +Y LI
Sbjct: 294 DL--------------VHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGG 339
Query: 278 FCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKH 332
C G + K +++ KG SP L+ G + E+A + + ++K+
Sbjct: 340 LCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKN 394
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 118/258 (45%), Gaps = 15/258 (5%)
Query: 23 QGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVIL 82
+G L++A L + G Y+ L+ F + A+ L+G+M++ ++PDV
Sbjct: 168 RGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDS 227
Query: 83 YAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEIS 142
Y I+++G +G+V A+++ +M+ +G +PD Y ++ C QL A L +
Sbjct: 228 YKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMK 287
Query: 143 GHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLD 202
D + +I C++ +A+++ + M GC P++V++ LI GLC G D
Sbjct: 288 LKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFD 347
Query: 203 EAHLLFYKMEIGKSPSLFFRLAQG-SDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLAD 261
E +M +++G S H S S L V+ C G+ A ++ +
Sbjct: 348 EGKKYLEEM-----------ISKGFSPHFSVSNCL---VKGFCSFGKVEEACDVVEVVMK 393
Query: 262 SGVVPDIKTYNILINSFC 279
+G T+ ++I C
Sbjct: 394 NGETLHSDTWEMVIPLIC 411
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 94/194 (48%), Gaps = 2/194 (1%)
Query: 12 TFNVLLNGFCKQGKLEEAVSLL-RLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGR 70
++N+L+ FC L A L ++LERD + Y LI GF + + N A L
Sbjct: 192 SYNLLMQAFCLNDDLSIAYQLFGKMLERDVVP-DVDSYKILIQGFCRKGQVNGAMELLDD 250
Query: 71 MIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQ 130
M+ G +PD + Y +L L + ++ EA K+ M +G PD YN +I GFC +
Sbjct: 251 MLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDR 310
Query: 131 LDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNA 190
AR + ++ + ++ ++ LI +C +GM E ++ +M G P N
Sbjct: 311 AMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNC 370
Query: 191 LINGLCKAGKLDEA 204
L+ G C GK++EA
Sbjct: 371 LVKGFCSFGKVEEA 384
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 2/209 (0%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLL-RLLERDGRGIRLSGYSSLIDGFFKAR 59
M R D+ ++ +L+ GFC++G++ A+ LL +L + RLS Y++L++ +
Sbjct: 216 MLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLS-YTTLLNSLCRKT 274
Query: 60 RYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYN 119
+ EA+ L RM G PD++ Y M+ G E R +A K+ +M+ G P++ Y
Sbjct: 275 QLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYR 334
Query: 120 AIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKL 179
+I G CD G D + E+ L+ C G V EA ++ + K
Sbjct: 335 TLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKN 394
Query: 180 GCFPSAVTFNALINGLCKAGKLDEAHLLF 208
G + T+ +I +C + ++ L
Sbjct: 395 GETLHSDTWEMVIPLICNEDESEKIKLFL 423
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 159/395 (40%), Gaps = 55/395 (13%)
Query: 148 HDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLL 207
H +H ILI ++ + ++ + G + F LI +A ++
Sbjct: 82 HSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLST 141
Query: 208 FYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPD 267
FYKM L F H++ + + V H G A++L GV+P+
Sbjct: 142 FYKM-------LEFNFTPQPKHLNRILDVL--VSH---RGYLQKAFELFKSSRLHGVMPN 189
Query: 268 IKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRD 327
++YN+L+ +FC +++ A++LF + + + PD +Y LI G R + A ++ D
Sbjct: 190 TRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLD 249
Query: 328 HMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGE 387
ML P Y L+ LCR ++ A+ L
Sbjct: 250 DMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKL--------------------------- 282
Query: 388 VERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNIN---INPTS 444
L + + + +L Y+ +++GFC+ D A+ VLD+ N N S
Sbjct: 283 -------LCRMKLKGCNPDLVHYNTMILGFCRE---DRAMDARKVLDDMLSNGCSPNSVS 332
Query: 445 CVHLISGLCAKRNLYDAVVIFLYSL-DKGFELGPKICKELLECLLVSQDKRKYAIDLIGR 503
LI GLC + ++D +L + KGF + L++ S K + A D++
Sbjct: 333 YRTLIGGLC-DQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKG-FCSFGKVEEACDVVEV 390
Query: 504 MKSRGYRLHKYQYRQTISLLQQLQEGKAVKLFSED 538
+ G LH + I L+ E + +KLF ED
Sbjct: 391 VMKNGETLHSDTWEMVIPLICNEDESEKIKLFLED 425
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 154/335 (45%), Gaps = 23/335 (6%)
Query: 14 NVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR-YNEAHSLYGRMI 72
N +L+ K GKL+ + L ++RDG + Y++L+ G K + Y +A L G +
Sbjct: 170 NSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELP 229
Query: 73 KGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLD 132
GI D ++Y +L ++ GR EA +M G P+ + Y++++ + G
Sbjct: 230 HNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYK 289
Query: 133 HARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALI 192
A L E+ + + T L+ K G+ ++E+ +++E G + + + L+
Sbjct: 290 KADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLM 349
Query: 193 NGLCKAGKLDEAHLLFYKME------IGKSPSLFF-------RLAQGSDHVSDSVSLQKK 239
+GL KAGKL+EA +F M+ G + S+ R + + DS + +K
Sbjct: 350 DGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEK 409
Query: 240 VEHM---------CEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKL 290
+ + C AG+ + +++ ++ + V PD T++ILI F K A++
Sbjct: 410 CDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQT 469
Query: 291 FKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKI 325
D+ KG + +LI L ++ + +AF +
Sbjct: 470 TLDMHSKGHRLEEELCSSLIYHLGKIRAQAEAFSV 504
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 87/414 (21%), Positives = 168/414 (40%), Gaps = 58/414 (14%)
Query: 13 FNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMI 72
NV+L F G+ ++ + L +++ G+ I +S YSS I F A+ ++A +Y +
Sbjct: 101 LNVILRDFGISGRWQDLIQLFEWMQQHGK-ISVSTYSSCIK-FVGAKNVSKALEIYQSIP 158
Query: 73 KGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLD 132
+V + +L L G++ +K+F +M + GL PD YN ++ G +
Sbjct: 159 DESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKV---K 215
Query: 133 HARSLHVEISG---HDGLH-DTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
+ +E+ G H+G+ D+ + ++ G EA+ QM+ G P+ +
Sbjct: 216 NGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHY 275
Query: 189 NALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQ 248
++L+N G +A
Sbjct: 276 SSLLNSYSWKGDYKKAD------------------------------------------- 292
Query: 249 TLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGT 308
+L+T++ G+VP+ L+ + K G + + +L +L+ G + + + Y
Sbjct: 293 -----ELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCM 347
Query: 309 LIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSL 368
L+DGL + + E+A I D M +++ LCR K+ A L + +
Sbjct: 348 LMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTY 407
Query: 369 PGRDNDSINA-LEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAK 421
D +N L Y GE+E +R + ++D + + + IL+ F + K
Sbjct: 408 EKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEK 461
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 99/225 (44%), Gaps = 10/225 (4%)
Query: 243 MCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGN-MNGAFKLFKDLQLKGLSP 301
+ + G+ + KL Q+ G+ PD+ TYN L+ K N A +L +L G+
Sbjct: 176 LVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQM 235
Query: 302 DSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALM---TWLCRGKKISLAF 358
DSV YGT++ R E+A M P+ Y +L+ +W KK A
Sbjct: 236 DSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKK---AD 292
Query: 359 SLYLEYLKSLPGRDNDSI--NALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIG 416
L E +KS+ N + L+ Y G +R+ L EL+ N PY +L+ G
Sbjct: 293 ELMTE-MKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDG 351
Query: 417 FCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDA 461
+A K++EA IF + + + + +IS LC + +A
Sbjct: 352 LSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEA 396
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 147/329 (44%), Gaps = 15/329 (4%)
Query: 10 LATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYG 69
L T ++ F G+ EEAV + L G + L+D K +R +A +
Sbjct: 155 LNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLL 214
Query: 70 RMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIG 129
++ K I P+ + I + G RV EA+ EM G P Y II+ +C
Sbjct: 215 QL-KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQF 273
Query: 130 QLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFN 189
+ + E+ + ++ T+T ++ + + EA + +M++ GC P ++ +N
Sbjct: 274 EFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYN 333
Query: 190 ALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQT 249
LI+ L +AG+L+EA +F ++E+ P L + ++ + + C +
Sbjct: 334 CLIHTLARAGRLEEAERVF-RVEM---PELGVSI--------NTSTYNSMIAMYCHHDEE 381
Query: 250 LNAYKLLTQLADSGVV-PDIKTYNILINSFCKAGNMNGAFKLFKDLQLK-GLSPDSVTYG 307
A +LL ++ S + PD+ TY L+ S K G++ KL K++ K LS D TY
Sbjct: 382 DKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYT 441
Query: 308 TLIDGLYRVEREEDAFKIRDHMLKHVCEP 336
LI L R E A+ + + M+ P
Sbjct: 442 FLIQRLCRANMCEWAYCLFEEMISQDITP 470
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 101/211 (47%), Gaps = 7/211 (3%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
F+ + ++ ++ +C+Q + + +L +E +G Y++++ + + EA
Sbjct: 255 FRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEAL 314
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMF-AEMIQRGLLPDAHCYNAIIKG 124
+ RM + G PD + Y ++ L+ GR+ EA ++F EM + G+ + YN++I
Sbjct: 315 RVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAM 374
Query: 125 FCDIGQLDHARSLHVEISGHDGLH-DTCTHTILICEMCKKGMVREAQEMFNQM---EKLG 180
+C + D A L E+ + + D T+ L+ K+G V E ++ +M L
Sbjct: 375 YCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLS 434
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKM 211
S TF LI LC+A + A+ LF +M
Sbjct: 435 LDESTYTF--LIQRLCRANMCEWAYCLFEEM 463
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/326 (18%), Positives = 143/326 (43%), Gaps = 18/326 (5%)
Query: 164 GMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRL 223
G EA +F+++ + G + + N L++ LCK ++++A ++ +++ +P
Sbjct: 169 GEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITP------ 222
Query: 224 AQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGN 283
++ + + C+A + A + ++ G P + +Y +I +C+
Sbjct: 223 --------NAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFE 274
Query: 284 MNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKA 343
+++ +++ G P+S+TY T++ L + E+A ++ M + C+P Y
Sbjct: 275 FIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNC 334
Query: 344 LMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSI--NALEEYFMKGEVERAIRGLLELD-F 400
L+ L R ++ A ++ + L N S + + Y E ++AI L E++
Sbjct: 335 LIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESS 394
Query: 401 RFRDFNLAPYSILLIG-FCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLY 459
+ ++ Y LL F + V+ ++ ++ + +++++ ++ LI LC
Sbjct: 395 NLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCE 454
Query: 460 DAVVIFLYSLDKGFELGPKICKELLE 485
A +F + + + C LLE
Sbjct: 455 WAYCLFEEMISQDITPRHRTCLLLLE 480
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 147/329 (44%), Gaps = 15/329 (4%)
Query: 10 LATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYG 69
L T ++ F G+ EEAV + L G + L+D K +R +A +
Sbjct: 155 LNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLL 214
Query: 70 RMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIG 129
++ K I P+ + I + G RV EA+ EM G P Y II+ +C
Sbjct: 215 QL-KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQF 273
Query: 130 QLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFN 189
+ + E+ + ++ T+T ++ + + EA + +M++ GC P ++ +N
Sbjct: 274 EFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYN 333
Query: 190 ALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQT 249
LI+ L +AG+L+EA +F ++E+ P L + ++ + + C +
Sbjct: 334 CLIHTLARAGRLEEAERVF-RVEM---PELGVSI--------NTSTYNSMIAMYCHHDEE 381
Query: 250 LNAYKLLTQLADSGVV-PDIKTYNILINSFCKAGNMNGAFKLFKDLQLK-GLSPDSVTYG 307
A +LL ++ S + PD+ TY L+ S K G++ KL K++ K LS D TY
Sbjct: 382 DKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYT 441
Query: 308 TLIDGLYRVEREEDAFKIRDHMLKHVCEP 336
LI L R E A+ + + M+ P
Sbjct: 442 FLIQRLCRANMCEWAYCLFEEMISQDITP 470
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 101/211 (47%), Gaps = 7/211 (3%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
F+ + ++ ++ +C+Q + + +L +E +G Y++++ + + EA
Sbjct: 255 FRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEAL 314
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMF-AEMIQRGLLPDAHCYNAIIKG 124
+ RM + G PD + Y ++ L+ GR+ EA ++F EM + G+ + YN++I
Sbjct: 315 RVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAM 374
Query: 125 FCDIGQLDHARSLHVEISGHDGLH-DTCTHTILICEMCKKGMVREAQEMFNQM---EKLG 180
+C + D A L E+ + + D T+ L+ K+G V E ++ +M L
Sbjct: 375 YCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLS 434
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKM 211
S TF LI LC+A + A+ LF +M
Sbjct: 435 LDESTYTF--LIQRLCRANMCEWAYCLFEEM 463
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/326 (18%), Positives = 143/326 (43%), Gaps = 18/326 (5%)
Query: 164 GMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRL 223
G EA +F+++ + G + + N L++ LCK ++++A ++ +++ +P
Sbjct: 169 GEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITP------ 222
Query: 224 AQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGN 283
++ + + C+A + A + ++ G P + +Y +I +C+
Sbjct: 223 --------NAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFE 274
Query: 284 MNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKA 343
+++ +++ G P+S+TY T++ L + E+A ++ M + C+P Y
Sbjct: 275 FIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNC 334
Query: 344 LMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSI--NALEEYFMKGEVERAIRGLLELD-F 400
L+ L R ++ A ++ + L N S + + Y E ++AI L E++
Sbjct: 335 LIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESS 394
Query: 401 RFRDFNLAPYSILLIG-FCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLY 459
+ ++ Y LL F + V+ ++ ++ + +++++ ++ LI LC
Sbjct: 395 NLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCE 454
Query: 460 DAVVIFLYSLDKGFELGPKICKELLE 485
A +F + + + C LLE
Sbjct: 455 WAYCLFEEMISQDITPRHRTCLLLLE 480
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 169/402 (42%), Gaps = 52/402 (12%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
F D+ T+N L++ C GK ++A+ + L+ G S Y LI G K+ R ++A
Sbjct: 285 FGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAM 344
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
+YG M G +PD I+Y +L G +V EA ++F +M+Q G+ YN +I G
Sbjct: 345 RIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGL 404
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
G+ + +L ++ D T +I+ ++C++G + A ++ +ME G
Sbjct: 405 FRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDL 464
Query: 186 VTFNALINGLCKAGKLD----------EAHLL--FYKMEIGKSPSLFFRLAQGSDHVS-- 231
VT ++L+ G K G+ D E +L+ + G SL ++ D+
Sbjct: 465 VTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKDKDYTPMF 524
Query: 232 ----------------DSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVP--------- 266
D + ++V M + + + Y + QLA P
Sbjct: 525 PSKGSFLDIMSMVGSEDDGASAEEVSPMEDDPWSSSPY--MDQLAHQRNQPKPLFGLARG 582
Query: 267 ----------DIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSP-DSVTYGTLIDGLYR 315
D+ N ++ + G+++ A KLF+ G++ S TY +++ +
Sbjct: 583 QRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVK 642
Query: 316 VEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLA 357
+ A + D M ++ C A Y ++ L + + LA
Sbjct: 643 KGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLA 684
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 149/345 (43%), Gaps = 39/345 (11%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSL- 67
D +LL+ + GK E A+ +L +E G + S Y S++ K A S+
Sbjct: 126 DQTMAKILLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSIL 185
Query: 68 --------------YGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLP 113
GR+I LP + +L GL E ++F ++ +G+
Sbjct: 186 FKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKL--KGMKR 243
Query: 114 ---DAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLH------DTCTHTILICEMCKKG 164
D YN I GF G LD A SL E+ ++ D CT+ LI +C G
Sbjct: 244 FKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFG 303
Query: 165 MVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLA 224
++A ++++++ G P T+ LI G CK+ ++D+A ++ +M
Sbjct: 304 KAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEM------------- 350
Query: 225 QGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNM 284
Q + V D++ ++ +A + A +L ++ GV TYNILI+ + G
Sbjct: 351 QYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRA 410
Query: 285 NGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHM 329
F LF DL+ KG D++T+ + L R + E A K+ + M
Sbjct: 411 EAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEM 455
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 173/406 (42%), Gaps = 28/406 (6%)
Query: 38 RDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVG 97
R G + YS + + E L G M + G+ D + I+L L G+
Sbjct: 85 RPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFE 144
Query: 98 EAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEI-SGHDGLHDTCTHTIL 156
A+ + M + G + Y++++ +L A S+ ++ D D T ++
Sbjct: 145 SALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVI 204
Query: 157 ICE--------------MCKKGMVREAQEMFNQMEKLGCFP-SAVTFNALINGLCKAGKL 201
I + + M E + +F +++ + F ++N I+G G L
Sbjct: 205 IVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDL 264
Query: 202 DEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLAD 261
D A LF +M+ S GS D + + +C G+ +A + +L
Sbjct: 265 DAALSLFKEMKERSS-------VYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKV 317
Query: 262 SGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREED 321
SG PD TY ILI CK+ M+ A +++ ++Q G PD++ Y L+DG + + +
Sbjct: 318 SGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTE 377
Query: 322 AFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSIN---A 378
A ++ + M++ S Y L+ L R + F+L+ + K G+ D+I
Sbjct: 378 ACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKK--GQFVDAITFSIV 435
Query: 379 LEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVD 424
+ +G++E A++ + E++ R +L S LLIGF + + D
Sbjct: 436 GLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWD 481
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 64/114 (56%), Gaps = 1/114 (0%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D+AT+NV++ G K G+ + A ++L L + G + + Y++LI+ KA R +EA L+
Sbjct: 664 DIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLF 723
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAII 122
M GI PDV+ Y M+ S G++ EA K M+ G LP+ H + I+
Sbjct: 724 DHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPN-HVTDTIL 776
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 101/224 (45%), Gaps = 21/224 (9%)
Query: 58 ARRYNEAHSLYG--RMIKGGILPDVILYAIMLRGLS---NEGRVGEAVKMFAEMIQRGLL 112
A + N+ L+G R + PD +M LS ++G + A K+F G+
Sbjct: 567 AHQRNQPKPLFGLARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVT 626
Query: 113 P-DAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQE 171
++ YN+++ F G AR + ++ + D T+ ++I + K G A
Sbjct: 627 DLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASA 686
Query: 172 MFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEI-GKSPSLFFRLAQGSDHV 230
+ +++ K G + V +N LIN L KA +LDEA LF M+ G +P
Sbjct: 687 VLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINP------------- 733
Query: 231 SDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNIL 274
D VS +E +AG+ AYK L + D+G +P+ T IL
Sbjct: 734 -DVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVTDTIL 776
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 107/264 (40%), Gaps = 54/264 (20%)
Query: 114 DAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTI--LICEMCKKGMVREAQE 171
D N + + G L A L EI G+ D ++T ++ KKG + A+
Sbjct: 593 DVDMMNTFLSIYLSKGDLSLACKL-FEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARG 651
Query: 172 MFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVS 231
+ +QM + C T+N +I GL K G+ D A
Sbjct: 652 VLDQMFENFCAADIATYNVIIQGLGKMGRADLAS-------------------------- 685
Query: 232 DSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLF 291
+L +L G DI YN LIN+ KA ++ A +LF
Sbjct: 686 ----------------------AVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLF 723
Query: 292 KDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRG 351
++ G++PD V+Y T+I+ + + ++A+K ML C P+ V ++ +L G
Sbjct: 724 DHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNH-VTDTILDYL--G 780
Query: 352 KKISLAFSLYLEYLKSLPGRDNDS 375
K++ A ++++ P +N S
Sbjct: 781 KEMEKARFKKASFVRNKPNNNNIS 804
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 5/182 (2%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIR-LSGYS--SLIDGFFKARRYNEAH 65
D+ N L+ + +G L A L + +G G+ L+ Y+ S++ F K + A
Sbjct: 593 DVDMMNTFLSIYLSKGDLSLACKLFEIF--NGMGVTDLTSYTYNSMMSSFVKKGYFQTAR 650
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
+ +M + D+ Y ++++GL GR A + + ++G D YN +I
Sbjct: 651 GVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINAL 710
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
+LD A L + + D ++ +I K G ++EA + M GC P+
Sbjct: 711 GKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNH 770
Query: 186 VT 187
VT
Sbjct: 771 VT 772
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 102/201 (50%), Gaps = 2/201 (0%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
F D+ T+N+++ + GK + LL + +DG L Y+ L+ + A
Sbjct: 253 FTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAAL 312
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFA-EMIQRGLLPDAHCYNAIIKG 124
+L M + G+ P VI + ++ GLS G++ EA K F E ++ G PD CY +I G
Sbjct: 313 NLLNHMREVGVEPGVIHFTTLIDGLSRAGKL-EACKYFMDETVKVGCTPDVVCYTVMITG 371
Query: 125 FCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPS 184
+ G+L+ A + E++ L + T+ +I C G +EA + +ME GC P+
Sbjct: 372 YISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPN 431
Query: 185 AVTFNALINGLCKAGKLDEAH 205
V ++ L+N L AGK+ EAH
Sbjct: 432 FVVYSTLVNNLKNAGKVLEAH 452
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 116/259 (44%), Gaps = 29/259 (11%)
Query: 48 YSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMI 107
Y++++ ++Y +Y +M++ G PDV+ Y I++ G+ ++ EM+
Sbjct: 225 YNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMV 284
Query: 108 QRGLLPDAHCYNAII-------KGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEM 160
+ G PD + YN ++ K + L+H R + VE T LI +
Sbjct: 285 KDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPG-------VIHFTTLIDGL 337
Query: 161 CKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSL 219
+ G + + ++ K+GC P V + +I G G+L++A +F +M E G+ P++
Sbjct: 338 SRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNV 397
Query: 220 FFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFC 279
F + + C AG+ A LL ++ G P+ Y+ L+N+
Sbjct: 398 F--------------TYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLK 443
Query: 280 KAGNMNGAFKLFKDLQLKG 298
AG + A ++ KD+ KG
Sbjct: 444 NAGKVLEAHEVVKDMVEKG 462
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 164/387 (42%), Gaps = 28/387 (7%)
Query: 72 IKGGILPDVILYAIMLRGLSNEGRVGE-AVKMFAEMI-QRGLLPDAHCYNAIIKGFCDIG 129
I G ++ +V++ + N+ R + A K F Q A+CY+ ++K F + G
Sbjct: 107 ISGLLVREVLVGILRTLSFDNKTRCAKLAYKFFVWCGGQENFRHTANCYHLLMKIFAECG 166
Query: 130 QLDHARSLHVEISGHDGLHDT-CTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
+ L E+ DG T CT +LIC + G+ R+ E F + + P ++
Sbjct: 167 EYKAMCRLIDEMI-KDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSY 225
Query: 189 NALINGLCKAGKLDEAHLLFYKM-EIGKSPS-LFFRLAQGSDHVSDSVSLQKKVEHMCEA 246
NA+++ L + ++ +M E G +P L + + ++
Sbjct: 226 NAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANF---------------RL 270
Query: 247 GQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTY 306
G+T Y+LL ++ G PD+ TYNIL++ A L ++ G+ P + +
Sbjct: 271 GKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHF 330
Query: 307 GTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLK 366
TLIDGL R + E D +K C P Y ++T G ++ A ++ E +
Sbjct: 331 TTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTE 390
Query: 367 SLPGRDNDSINALEEYF-MKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDE 425
+ + N++ F M G+ + A L E++ R + N YS L+ A KV E
Sbjct: 391 KGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLE 450
Query: 426 ALIIFSVLDEFNININPTSCVHLISGL 452
A + + + VHLIS L
Sbjct: 451 AHEVVKDM------VEKGHYVHLISKL 471
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 121/308 (39%), Gaps = 15/308 (4%)
Query: 48 YSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMI 107
Y L+ F + Y L MIK G + +++ G + V+ F +
Sbjct: 155 YHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSK 214
Query: 108 QRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVR 167
P H YNAI+ + Q ++ ++ D T+ I++ + G
Sbjct: 215 TFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTD 274
Query: 168 EAQEMFNQMEKLGCFPSAVTFNALINGLCKAGK-LDEAHLLFYKMEIGKSPSLFFRLAQG 226
+ ++M K G P T+N L++ L K L +LL + E+G P +
Sbjct: 275 RLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGV------- 327
Query: 227 SDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNG 286
+ ++ + AG+ + + G PD+ Y ++I + G +
Sbjct: 328 -------IHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEK 380
Query: 287 AFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMT 346
A ++FK++ KG P+ TY ++I G + ++A + M C P+F VY L+
Sbjct: 381 AEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVN 440
Query: 347 WLCRGKKI 354
L K+
Sbjct: 441 NLKNAGKV 448
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 142/302 (47%), Gaps = 21/302 (6%)
Query: 56 FKARRYNEAHSLYGRMIKGGILP-DVILYAIMLRGLSNEGRVGEAVKMFAEMI--QRGLL 112
FK+ ++A SL+ + +P D+ + +L+ + V + VK+F ++ Q
Sbjct: 60 FKSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFR 119
Query: 113 PDAHCYNAIIKGFC---DIGQLDHARSLHVEISGHDGLH-DTCTHTILICEMCKKGMVRE 168
P + ++ C D + R L++ + ++GL D T I + +C+ G V E
Sbjct: 120 PGRSTFLILLSHACRAPDSSISNVHRVLNLMV--NNGLEPDQVTTDIAVRSLCETGRVDE 177
Query: 169 AQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSD 228
A+++ ++ + P T+N L+ LCK L H+++ ++ + D
Sbjct: 178 AKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDL---HVVYEFVD---------EMRDDFD 225
Query: 229 HVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAF 288
D VS ++++C + A L+++L ++G PD YN ++ FC + A
Sbjct: 226 VKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAV 285
Query: 289 KLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWL 348
++K ++ +G+ PD +TY TLI GL + R E+A M+ EP A Y +LM +
Sbjct: 286 GVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGM 345
Query: 349 CR 350
CR
Sbjct: 346 CR 347
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 118/285 (41%), Gaps = 22/285 (7%)
Query: 5 RFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEA 64
R DL N +L + + + V L + + + R G S+ + A R ++
Sbjct: 80 RIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFR-PGRSTFLILLSHACRAPDS 138
Query: 65 -----HSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYN 119
H + M+ G+ PD + I +R L GRV EA + E+ ++ PD + YN
Sbjct: 139 SISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYN 198
Query: 120 AIIKGFCDIGQLDHARSLHVEI-SGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEK 178
++K C L E+ D D + TILI +C +REA + +++
Sbjct: 199 FLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGN 258
Query: 179 LGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQ 237
G P +N ++ G C K EA ++ KM E G P D ++
Sbjct: 259 AGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEP--------------DQITYN 304
Query: 238 KKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAG 282
+ + +AG+ A L + D+G PD TY L+N C+ G
Sbjct: 305 TLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 97/224 (43%), Gaps = 12/224 (5%)
Query: 240 VEHMCEAGQTL--NAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLK 297
+ H C A + N +++L + ++G+ PD T +I + S C+ G ++ A L K+L K
Sbjct: 129 LSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEK 188
Query: 298 GLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHV-CEPSFAVYKALMTWLCRGKKISL 356
PD+ TY L+ L + + ++ D M +P + L+ +C K +
Sbjct: 189 HSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLRE 248
Query: 357 AFSLYLEYLKSLPGRDNDSINALEEYFMKG-----EVERAIRGLLELDFRFRDFNLAPYS 411
A +YL G D L MKG + A+ ++ + + Y+
Sbjct: 249 A--MYLVSKLGNAGFKPDCF--LYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYN 304
Query: 412 ILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAK 455
L+ G +A +V+EA + + + + + L++G+C K
Sbjct: 305 TLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRK 348
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 130/591 (21%), Positives = 237/591 (40%), Gaps = 99/591 (16%)
Query: 11 ATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGR 70
+T+N L+N G EA+ + + + +G G L ++ ++ + R+Y++A S +
Sbjct: 82 STYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFEL 141
Query: 71 MIKGGILPDVILYAIMLRGLSNEGRVGEAVKMF-------AE------------------ 105
M + PD + I++ LS G+ +A+ +F AE
Sbjct: 142 MKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVK 201
Query: 106 ------------MIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTH 153
M+ GL P+ YNA++ + G A S+ +I + + D ++
Sbjct: 202 GEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSY 261
Query: 154 TILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEI 213
T L+ + +A+E+F M K P+ VT+NALI+ G L EA +F +ME
Sbjct: 262 TCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQ 321
Query: 214 -GKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYN 272
G P++ VS+ + + + +N +L+ G+ + YN
Sbjct: 322 DGIKPNV--------------VSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYN 367
Query: 273 ILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAF--------- 323
I S+ A + A L++ ++ K + DSVT+ LI G R+ + +A
Sbjct: 368 SAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDL 427
Query: 324 --------------------------KIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLA 357
I + M CEP Y +++ +K A
Sbjct: 428 SIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKA 487
Query: 358 FSLYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRD--FNLAPYSILLI 415
L+LE + D+ + +AL F KG + L++L R ++ F A + +
Sbjct: 488 CELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDL-MREKEIPFTGAVFFEIFS 546
Query: 416 GFCQAKKVDEALIIFSVLDEF--NININPTS-CVHLISGLCAKRNLYDAVVIFLYS-LDK 471
++ A+ + ++D + +++I T+ +HL K +A++ Y +
Sbjct: 547 ACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLF----GKSGKVEAMMKLFYKIIAS 602
Query: 472 GFELGPKICKELLECLLVSQDKRKYAIDLIGRMKSRGYRLHKYQYRQTISL 522
G + K LLE LL + RKY I+++ M G + YR IS
Sbjct: 603 GVGINLKTYAILLEHLLAVGNWRKY-IEVLEWMSGAGIQPSNQMYRDIISF 652
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/451 (21%), Positives = 188/451 (41%), Gaps = 58/451 (12%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D T++ L+N + G+ A++L+ + R S Y++LI+ + + EA +
Sbjct: 45 DAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVC 104
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
+M G+ PD++ + I+L + + +A+ F M + PD +N II +C
Sbjct: 105 KKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIII--YC-- 160
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQM--EKLGCFPSAV 186
+ K G +A ++FN M ++ C P V
Sbjct: 161 -------------------------------LSKLGQSSQALDLFNSMREKRAECRPDVV 189
Query: 187 TFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQG--SDHVSDSVSLQKKVEHMC 244
TF ++++ G+++ +F M +A+G + VS + + H
Sbjct: 190 TFTSIMHLYSVKGEIENCRAVFEAM-----------VAEGLKPNIVSYNALMGAYAVH-- 236
Query: 245 EAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSV 304
G + A +L + +G++PD+ +Y L+NS+ ++ A ++F ++ + P+ V
Sbjct: 237 --GMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVV 294
Query: 305 TYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRG-KKISLAFSLYLE 363
TY LID +A +I M + +P+ L+ R KK+++ L
Sbjct: 295 TYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAA 354
Query: 364 YLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKV 423
+ + +A+ Y E+E+AI + + + ++IL+ G C+ K
Sbjct: 355 QSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKY 414
Query: 424 DEALIIFSVLDEFNININPTSCVHLISGLCA 454
EA+ +++ +I P + S LCA
Sbjct: 415 PEAISYLKEMEDLSI---PLTKEVYSSVLCA 442
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 164/377 (43%), Gaps = 26/377 (6%)
Query: 3 MRRFQR--DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
MR+ +R ++ T+N L++ + G L EAV + R +E+DG + +L+ ++++
Sbjct: 284 MRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKK 343
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
++ GI + Y + N + +A+ ++ M ++ + D+ +
Sbjct: 344 KVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTI 403
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I G C + + A S E+ ++ ++C K+G V EA+ +FNQM+ G
Sbjct: 404 LISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAG 463
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEI-GKSP-----SLFFRLAQGSDHVSDSV 234
C P + + ++++ + K +A LF +ME G P S R S+
Sbjct: 464 CEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVF 523
Query: 235 SL-----QKKVE-------HMCEAGQTLNAYKL---LTQLADSGVVP--DIKTYNILINS 277
L +K++ + A TL +K L Q+ D +P I N +++
Sbjct: 524 VLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDP-YLPSLSIGLTNQMLHL 582
Query: 278 FCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPS 337
F K+G + KLF + G+ + TY L++ L V ++ + M +PS
Sbjct: 583 FGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPS 642
Query: 338 FAVYKALMTWLCRGKKI 354
+Y+ ++++ R I
Sbjct: 643 NQMYRDIISFGERSAGI 659
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/478 (19%), Positives = 187/478 (39%), Gaps = 14/478 (2%)
Query: 62 NEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAI 121
++A L+ M K PD Y ++ G+ A+ + +M++ + P YN +
Sbjct: 28 DQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNL 87
Query: 122 IKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGC 181
I G A + +++ + D TH I++ +A F M+
Sbjct: 88 INACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKV 147
Query: 182 FPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVE 241
P TFN +I L K G+ +A LF M + ++ D V+ +
Sbjct: 148 RPDTTTFNIIIYCLSKLGQSSQALDLFNSMR-----------EKRAECRPDVVTFTSIMH 196
Query: 242 HMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSP 301
G+ N + + G+ P+I +YN L+ ++ G A + D++ G+ P
Sbjct: 197 LYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIP 256
Query: 302 DSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLY 361
D V+Y L++ R + A ++ M K +P+ Y AL+ ++ A ++
Sbjct: 257 DVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIF 316
Query: 362 LEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLE-LDFRFRDFNLAPYSILLIGFCQA 420
+ + + S+ L + + + + +L R + N A Y+ + + A
Sbjct: 317 RQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINA 376
Query: 421 KKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKIC 480
++++A+ ++ + + + + + LISG C +A+ D L ++
Sbjct: 377 AELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVY 436
Query: 481 KELLECLLVSQDKRKYAIDLIGRMKSRGYRLHKYQYRQTISLLQQLQE-GKAVKLFSE 537
+L C Q + A + +MK G Y + ++ GKA +LF E
Sbjct: 437 SSVL-CAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLE 493
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 130/591 (21%), Positives = 237/591 (40%), Gaps = 99/591 (16%)
Query: 11 ATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGR 70
+T+N L+N G EA+ + + + +G G L ++ ++ + R+Y++A S +
Sbjct: 214 STYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFEL 273
Query: 71 MIKGGILPDVILYAIMLRGLSNEGRVGEAVKMF-------AE------------------ 105
M + PD + I++ LS G+ +A+ +F AE
Sbjct: 274 MKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVK 333
Query: 106 ------------MIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTH 153
M+ GL P+ YNA++ + G A S+ +I + + D ++
Sbjct: 334 GEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSY 393
Query: 154 TILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEI 213
T L+ + +A+E+F M K P+ VT+NALI+ G L EA +F +ME
Sbjct: 394 TCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQ 453
Query: 214 -GKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYN 272
G P++ VS+ + + + +N +L+ G+ + YN
Sbjct: 454 DGIKPNV--------------VSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYN 499
Query: 273 ILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAF--------- 323
I S+ A + A L++ ++ K + DSVT+ LI G R+ + +A
Sbjct: 500 SAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDL 559
Query: 324 --------------------------KIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLA 357
I + M CEP Y +++ +K A
Sbjct: 560 SIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKA 619
Query: 358 FSLYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRD--FNLAPYSILLI 415
L+LE + D+ + +AL F KG + L++L R ++ F A + +
Sbjct: 620 CELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDL-MREKEIPFTGAVFFEIFS 678
Query: 416 GFCQAKKVDEALIIFSVLDEF--NININPTS-CVHLISGLCAKRNLYDAVVIFLYS-LDK 471
++ A+ + ++D + +++I T+ +HL K +A++ Y +
Sbjct: 679 ACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLF----GKSGKVEAMMKLFYKIIAS 734
Query: 472 GFELGPKICKELLECLLVSQDKRKYAIDLIGRMKSRGYRLHKYQYRQTISL 522
G + K LLE LL + RKY I+++ M G + YR IS
Sbjct: 735 GVGINLKTYAILLEHLLAVGNWRKY-IEVLEWMSGAGIQPSNQMYRDIISF 784
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 107/539 (19%), Positives = 214/539 (39%), Gaps = 17/539 (3%)
Query: 2 WMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLE-RDGRGIRLSGYSSLIDGFFKARR 60
W+ RF R F VL+ ++G +E V++ + ++ + R Y+ +I +
Sbjct: 101 WVGRFARK--NFPVLIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNW 158
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
++A L+ M K PD Y ++ G+ A+ + +M++ + P YN
Sbjct: 159 VDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNN 218
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I G A + +++ + D TH I++ +A F M+
Sbjct: 219 LINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAK 278
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKV 240
P TFN +I L K G+ +A LF M + ++ D V+ +
Sbjct: 279 VRPDTTTFNIIIYCLSKLGQSSQALDLFNSMR-----------EKRAECRPDVVTFTSIM 327
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLS 300
G+ N + + G+ P+I +YN L+ ++ G A + D++ G+
Sbjct: 328 HLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGII 387
Query: 301 PDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSL 360
PD V+Y L++ R + A ++ M K +P+ Y AL+ ++ A +
Sbjct: 388 PDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEI 447
Query: 361 YLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLE-LDFRFRDFNLAPYSILLIGFCQ 419
+ + + + S+ L + + + + +L R + N A Y+ + +
Sbjct: 448 FRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYIN 507
Query: 420 AKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKI 479
A ++++A+ ++ + + + + + LISG C +A+ D L ++
Sbjct: 508 AAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEV 567
Query: 480 CKELLECLLVSQDKRKYAIDLIGRMKSRGYRLHKYQYRQTISLLQQLQE-GKAVKLFSE 537
+L C Q + A + +MK G Y + ++ GKA +LF E
Sbjct: 568 YSSVL-CAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLE 625
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 161/369 (43%), Gaps = 26/369 (7%)
Query: 3 MRRFQR--DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
MR+ +R ++ T+N L++ + G L EAV + R +E+DG + +L+ ++++
Sbjct: 416 MRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKK 475
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
++ GI + Y + N + +A+ ++ M ++ + D+ +
Sbjct: 476 KVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTI 535
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I G C + + A S E+ ++ ++C K+G V EA+ +FNQM+ G
Sbjct: 536 LISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAG 595
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEI-GKSP-----SLFFRLAQGSDHVSDSV 234
C P + + ++++ + K +A LF +ME G P S R S+
Sbjct: 596 CEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVF 655
Query: 235 SL-----QKKVE-------HMCEAGQTLNAYKL---LTQLADSGVVP--DIKTYNILINS 277
L +K++ + A TL +K L Q+ D +P I N +++
Sbjct: 656 VLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDP-YLPSLSIGLTNQMLHL 714
Query: 278 FCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPS 337
F K+G + KLF + G+ + TY L++ L V ++ + M +PS
Sbjct: 715 FGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPS 774
Query: 338 FAVYKALMT 346
+Y+ +++
Sbjct: 775 NQMYRDIIS 783
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 147/325 (45%), Gaps = 14/325 (4%)
Query: 12 TFNVLLNGFCKQGKLEEAVSLLRLLERDGRGI-RLSGYSSLIDGFFKARRYNEAHSLYGR 70
T N ++ + + E++SL + + + + Y+ +I+ +EA +Y
Sbjct: 182 TCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRH 241
Query: 71 MIKGGIL-PDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIG 129
++ P + Y + +GL GR+G+A + EM+ +G D+ YN +I+G+ D+G
Sbjct: 242 ILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLG 301
Query: 130 QLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQM--EKLGCFPSAVT 187
D A E+ ++D + + +KG +EA E + + +K P T
Sbjct: 302 DFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLDKKFRMHPP--T 359
Query: 188 FNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQ-KKVEHMCEA 246
N L+ K GK DEA LF +M +P + SD+V + + M E
Sbjct: 360 GNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVN------SDTVGIMVNECFKMGEF 413
Query: 247 GQTLNAYKLL-TQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVT 305
+ +N +K + +++ V D Y ++ FC+ G + A + F + + L D+ +
Sbjct: 414 SEAINTFKKVGSKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPADAPS 473
Query: 306 YGTLIDGLYRVEREEDAFKIRDHML 330
+ +ID + ER +DA K+ D M+
Sbjct: 474 HRAMIDAYLKAERIDDAVKMLDRMV 498
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 75/168 (44%), Gaps = 10/168 (5%)
Query: 16 LLNGFCKQGKLEEAVSLL-----RLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGR 70
++ FC+QG L EA R L D R ++ID + KA R ++A + R
Sbjct: 442 IVTRFCEQGMLTEAERFFAEGVSRSLPADAPSHR-----AMIDAYLKAERIDDAVKMLDR 496
Query: 71 MIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQ 130
M+ + A + L G++ E+ ++ +M +R PD Y+ +++G CD
Sbjct: 497 MVDVNLRVVADFGARVFGELIKNGKLTESAEVLTKMGEREPKPDPSIYDVVVRGLCDGDA 556
Query: 131 LDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEK 178
LD A+ + E+ H+ T +I K G E +++ N + +
Sbjct: 557 LDQAKDIVGEMIRHNVGVTTVLREFIIEVFEKAGRREEIEKILNSVAR 604
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 16/181 (8%)
Query: 262 SGVVPDIKTYNILINSFCKAGNMNGAFKLFKD-LQLKGLSPDSVTYGTLIDGLYRVEREE 320
S +VP++ +YN +IN+ C GN++ A ++++ L +P SVTY L GL + R
Sbjct: 210 SNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIG 269
Query: 321 DAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGR---DNDSIN 377
DA + ML VY L+ RG F +E+ L + + +N
Sbjct: 270 DAASLLREMLSKGQAADSTVYNNLI----RGYLDLGDFDKAVEFFDELKSKCTVYDGIVN 325
Query: 378 A--LEEYFMKGEVERAI---RGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSV 432
A +E +F KG + A+ R LL+ FR ++LL F + K DEA +F+
Sbjct: 326 ATFMEYWFEKGNDKEAMESYRSLLDKKFRMHPPT---GNVLLEVFLKFGKKDEAWALFNE 382
Query: 433 L 433
+
Sbjct: 383 M 383
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 21/223 (9%)
Query: 4 RRFQRDLATFNVLLNGFCKQGKLEEAVSLL-RLLERDGRGIRLSGYSS----LIDGFFKA 58
++F+ T NVLL F K GK +EA +L +L+ LS S +++ FK
Sbjct: 351 KKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKM 410
Query: 59 RRYNEAHSLY----GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPD 114
++EA + + ++ + D + Y ++ +G + EA + FAE + R L D
Sbjct: 411 GEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPAD 470
Query: 115 AHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTI------LICEMCKKGMVRE 168
A + A+I + ++D A + D + D + + E+ K G + E
Sbjct: 471 APSHRAMIDAYLKAERIDDA------VKMLDRMVDVNLRVVADFGARVFGELIKNGKLTE 524
Query: 169 AQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM 211
+ E+ +M + P ++ ++ GLC LD+A + +M
Sbjct: 525 SAEVLTKMGEREPKPDPSIYDVVVRGLCDGDALDQAKDIVGEM 567
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 110/225 (48%), Gaps = 33/225 (14%)
Query: 32 LLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLS 91
+ +++ + +GY+ +I G KA +++EA +++ ++ G+ PDV Y +M+R S
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSS 60
Query: 92 NEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTC 151
+G A K++AEMI+RGL+PD YN++I G C +L AR + S
Sbjct: 61 ----LGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCS--------- 107
Query: 152 THTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM 211
T LI CK V++ +F +M + G + +T+ LI+G + G + A +F +M
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 212 EIGK--SPSLFFR------------------LAQGSDHVSDSVSL 236
S S+ FR L Q S VS++V+L
Sbjct: 168 VSNGVYSSSITFRDILPQLCSRKELRKAVAMLLQKSSMVSNNVTL 212
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 87/197 (44%), Gaps = 30/197 (15%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D A +N++++G CK GK +EA ++ L G + Y+ +I + A LY
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKLY 68
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVK--------------------------M 102
MI+ G++PD I Y M+ GL + ++ +A K +
Sbjct: 69 AEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCSTFNTLINGYCKATRVKDGMNL 128
Query: 103 FAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCK 162
F EM +RG++ + Y +I GF +G + A + E+ + + T ++ ++C
Sbjct: 129 FCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCS 188
Query: 163 KGMVREAQEMFNQMEKL 179
+ +R+A M Q +
Sbjct: 189 RKELRKAVAMLLQKSSM 205
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 29/211 (13%)
Query: 172 MFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLF--------------YKMEI---- 213
MF M + +N +I+GLCKAGK DEA +F Y M I
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSS 60
Query: 214 -GKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYN 272
G++ L+ + + V D+++ + +C+ + A K V T+N
Sbjct: 61 LGRAEKLYAEMIR-RGLVPDTITYNSMIHGLCKQNKLAQARK---------VSKSCSTFN 110
Query: 273 ILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKH 332
LIN +CKA + LF ++ +G+ + +TY TLI G +V A I M+ +
Sbjct: 111 TLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSN 170
Query: 333 VCEPSFAVYKALMTWLCRGKKISLAFSLYLE 363
S ++ ++ LC K++ A ++ L+
Sbjct: 171 GVYSSSITFRDILPQLCSRKELRKAVAMLLQ 201
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 54/102 (52%)
Query: 4 RRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNE 63
R+ + +TFN L+NG+CK ++++ ++L + R G + Y++LI GF + +N
Sbjct: 100 RKVSKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNT 159
Query: 64 AHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAE 105
A ++ M+ G+ I + +L L + + +AV M +
Sbjct: 160 ALDIFQEMVSNGVYSSSITFRDILPQLCSRKELRKAVAMLLQ 201
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 151/335 (45%), Gaps = 20/335 (5%)
Query: 6 FQRDLATFNVLLNG--FCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNE 63
F + +NV + F +Q +L E ++L + +DG + YS++I + YN+
Sbjct: 182 FPMETIFYNVTMKSLRFGRQFQLIEEMALEMV--KDGVELDNITYSTIITCAKRCNLYNK 239
Query: 64 AHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIK 123
A + RM K G++PD + Y+ +L S G+V E + ++ + G PDA ++ + K
Sbjct: 240 AIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGK 299
Query: 124 GFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFP 183
F + G D R + E+ D + + L+ M + G A+ +FN+M + G P
Sbjct: 300 MFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTP 359
Query: 184 SAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHM 243
+ T AL+ KA +A L+ +M+ K P F L + +M
Sbjct: 360 NEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFI--------------LYNTLLNM 405
Query: 244 C-EAGQTLNAYKLLTQLADS-GVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSP 301
C + G A +L + +S PD +Y ++N + G A +LF+++ G+
Sbjct: 406 CADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQV 465
Query: 302 DSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEP 336
+ + L+ L + +R +D + D +K +P
Sbjct: 466 NVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKP 500
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 6/216 (2%)
Query: 2 WMRRFQR-----DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFF 56
W R + D T++ +L+ + K GK+EE +SL G +S L F
Sbjct: 243 WFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFG 302
Query: 57 KARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAH 116
+A Y+ + M + P+V++Y +L + G+ G A +F EM++ GL P+
Sbjct: 303 EAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEK 362
Query: 117 CYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQM 176
A++K + A L E+ D + L+ G+ EA+ +FN M
Sbjct: 363 TLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDM 422
Query: 177 -EKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM 211
E + C P ++ A++N GK ++A LF +M
Sbjct: 423 KESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEM 458
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/442 (20%), Positives = 175/442 (39%), Gaps = 87/442 (19%)
Query: 59 RRYNEAHSLYGRMIKGGILP-DVILYAIMLRGLSNEGRVGEAVKMFA-EMIQRGLLPDAH 116
R + + H+ + + + P + I Y + ++ L GR + ++ A EM++ G+ D
Sbjct: 164 REWQKTHTFFNWVKSKSLFPMETIFYNVTMKSLRF-GRQFQLIEEMALEMVKDGVELDNI 222
Query: 117 CYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQM 176
Y+ II TC C + K + E F +M
Sbjct: 223 TYSTII---------------------------TCAKR---CNLYNKAI-----EWFERM 247
Query: 177 EKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSL 236
K G P VT++A+++ K+GK++E L+ + A + D+++
Sbjct: 248 YKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYER-------------AVATGWKPDAIAF 294
Query: 237 QKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQL 296
+ EAG +L ++ V P++ YN L+ + +AG A LF ++
Sbjct: 295 SVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLE 354
Query: 297 KGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISL 356
GL+P+ T L+ + DA ++ + M + KK +
Sbjct: 355 AGLTPNEKTLTALVKIYGKARWARDALQLWEEM--------------------KAKKWPM 394
Query: 357 AFSLYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIG 416
F LY N +N + ++ E ER + E + R N + Y+ +L
Sbjct: 395 DFILY-----------NTLLNMCADIGLEEEAERLFNDMKE-SVQCRPDNFS-YTAMLNI 441
Query: 417 FCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELG 476
+ K ++A+ +F + + + +N C L+ L + + D V +F S+ +G +
Sbjct: 442 YGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPD 501
Query: 477 PKICKELLECLLV---SQDKRK 495
++C LL + + S+D K
Sbjct: 502 DRLCGCLLSVMALCESSEDAEK 523
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 99/199 (49%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
DL T+N ++ C++G +++ +S+ LE++G L +++L++ F++ + E ++
Sbjct: 192 DLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIW 251
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
M + P++ Y +RGL+ + +A+ + M G+ PD H YNA+I +
Sbjct: 252 DLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVD 311
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
L+ + E+ DT T+ +LI +CKKG + A E+ + K +
Sbjct: 312 NNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMY 371
Query: 189 NALINGLCKAGKLDEAHLL 207
++ L AGK+DEA L
Sbjct: 372 KPVVERLMGAGKIDEATQL 390
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 147/332 (44%), Gaps = 26/332 (7%)
Query: 48 YSSLIDGFFKARRYNEAHSL--YGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAE 105
YS+ I +A++++ + Y + D ++ ++L G S G A K+F E
Sbjct: 90 YSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYGYS--GMAEHAHKLFDE 147
Query: 106 MIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGL-HDTCTHTILICEMCKKG 164
M + +NA++ + + +LD A E+ G+ D T+ +I +C+KG
Sbjct: 148 MPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKG 207
Query: 165 MVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLA 224
+ + +F ++EK G P ++FN L L+E FY+ E+ + L
Sbjct: 208 SMDDILSIFEELEKNGFEPDLISFNTL---------LEE----FYRRELFVEGDRIWDLM 254
Query: 225 QGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNM 284
+ + + S +V + + +A L+ + G+ PD+ TYN LI ++ N+
Sbjct: 255 KSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNL 314
Query: 285 NGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKAL 344
K + +++ KGL+PD+VTY LI L + + A ++ + +KH +YK +
Sbjct: 315 EEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPV 374
Query: 345 MTWLCRGKKISLAFSL--------YLEYLKSL 368
+ L KI A L Y YL L
Sbjct: 375 VERLMGAGKIDEATQLVKNGKLQSYFRYLPDL 406
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 117/268 (43%), Gaps = 50/268 (18%)
Query: 164 GMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRL 223
GM A ++F++M +L C + +FNAL++ + KLDEA F +
Sbjct: 136 GMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKE------------- 182
Query: 224 AQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGN 283
L +K+ G+ PD+ TYN +I + C+ G+
Sbjct: 183 ------------LPEKL----------------------GITPDLVTYNTMIKALCRKGS 208
Query: 284 MNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKA 343
M+ +F++L+ G PD +++ TL++ YR E + +I D M P+ Y +
Sbjct: 209 MDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNS 268
Query: 344 LMTWLCRGKKISLAFSLYLEYLKSLP-GRDNDSINAL-EEYFMKGEVERAIRGLLELDFR 401
+ L R KK + A +L ++ +K+ D + NAL Y + +E ++ E+ +
Sbjct: 269 RVRGLTRNKKFTDALNL-IDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEK 327
Query: 402 FRDFNLAPYSILLIGFCQAKKVDEALII 429
+ Y +L+ C+ +D A+ +
Sbjct: 328 GLTPDTVTYCMLIPLLCKKGDLDRAVEV 355
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 76/167 (45%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
F+ DL +FN LL F ++ E + L++ + Y+S + G + +++ +A
Sbjct: 224 FEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDAL 283
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
+L M GI PDV Y ++ + + E +K + EM ++GL PD Y +I
Sbjct: 284 NLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLL 343
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEM 172
C G LD A + E H L + ++ + G + EA ++
Sbjct: 344 CKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQL 390
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 169/386 (43%), Gaps = 55/386 (14%)
Query: 48 YSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMI 107
Y+ ++D K RR+ E H ++ M K + Y ++L + +V EAV +F
Sbjct: 146 YNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRK 205
Query: 108 QRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVR 167
+ G+ D ++ ++ C ++ A +L G D +++ C G V
Sbjct: 206 EFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGC-DIKAMNMILNGWCVLGNVH 264
Query: 168 EAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQG 226
EA+ + + C P V++ +IN L K GKL +A L+ M + ++P + +
Sbjct: 265 EAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDV-----KI 319
Query: 227 SDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNG 286
++V D++ +K++ A ++ ++++ G P++ TYN L+ CK
Sbjct: 320 CNNVIDALCFKKRIPE---------ALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEK 370
Query: 287 AFKLFKDLQLKG--LSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKAL 344
++L ++++LKG SP+ VT+ L L +R +D + + M K+ CE + +Y
Sbjct: 371 VWELVEEMELKGGSCSPNDVTFSYL---LKYSQRSKDVDIVLERMAKNKCEMTSDLY--- 424
Query: 345 MTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRD 404
+L F LY+++ K R+ + E+ER+ G
Sbjct: 425 ----------NLMFRLYVQWDKEEKVRE-----------IWSEMERSGLGP--------- 454
Query: 405 FNLAPYSILLIGFCQAKKVDEALIIF 430
+ Y+I + G K+ EAL F
Sbjct: 455 -DQRTYTIRIHGLHTKGKIGEALSYF 479
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 135/305 (44%), Gaps = 31/305 (10%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
DL F+ LL C+ +E A +L R+ G + + +++G+ +EA +
Sbjct: 212 DLVAFHGLLMWLCRYKHVEFAETLFCSRRREF-GCDIKAMNMILNGWCVLGNVHEAKRFW 270
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
+I PDV+ Y M+ L+ +G++G+A++++ M PD N +I C
Sbjct: 271 KDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFK 330
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG--CFPSAV 186
++ A + EIS + T+ L+ +CK + E+ +ME G C P+ V
Sbjct: 331 KRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDV 390
Query: 187 TFNALINGLCKAGKLDEAHLLFYKMEIGKSP------SLFFRLAQGSDHVSDSVSLQKKV 240
TF+ L+ ++ +D ++ +M K +L FRL D ++KV
Sbjct: 391 TFSYLLKYSQRSKDVD---IVLERMAKNKCEMTSDLYNLMFRLYVQWDK-------EEKV 440
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLS 300
++ +++ SG+ PD +TY I I+ G + A F+++ KG+
Sbjct: 441 R------------EIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMV 488
Query: 301 PDSVT 305
P+ T
Sbjct: 489 PEPRT 493
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 131/312 (41%), Gaps = 33/312 (10%)
Query: 12 TFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY-GR 70
T+ VLLN + K++EAV + + G L + L+ + + A +L+ R
Sbjct: 180 TYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSR 239
Query: 71 MIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQ 130
+ G D+ ++L G G V EA + + ++I PD Y +I G+
Sbjct: 240 RREFGC--DIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGK 297
Query: 131 LDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNA 190
L A L+ + D +I +C K + EA E+F ++ + G P+ VT+N+
Sbjct: 298 LGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNS 357
Query: 191 LINGLCKAGKLDEAHLLFYKMEIGK---SP-----SLFFRLAQGSDHVSDSVSLQKKVEH 242
L+ LCK + ++ L +ME+ SP S + +Q S V + L++ ++
Sbjct: 358 LLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVD--IVLERMAKN 415
Query: 243 MCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPD 302
CE L YN++ + + +++ +++ GL PD
Sbjct: 416 KCEMTSDL--------------------YNLMFRLYVQWDKEEKVREIWSEMERSGLGPD 455
Query: 303 SVTYGTLIDGLY 314
TY I GL+
Sbjct: 456 QRTYTIRIHGLH 467
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 153/355 (43%), Gaps = 13/355 (3%)
Query: 12 TFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRM 71
T N +L +Q K + L + + G + Y+ + + R+ A Y
Sbjct: 132 TVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEHYKLF 191
Query: 72 IKGGIL-PDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQ 130
I L P + + I+++GL + + +A+++ +M +G + D Y+ ++ G
Sbjct: 192 IDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSD 251
Query: 131 LDHARSLHVEISGHDG--LHDTCTHTILICEMCKKGMVREAQEMFNQM--EKLGCFPSAV 186
D L+ E+ G + D + L+ K M +EA E + + E SA+
Sbjct: 252 ADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAM 311
Query: 187 TFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEA 246
+N ++ L + GK DEA LF ++ +P + G+ +V V C
Sbjct: 312 AYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVM--------VNGYCAG 363
Query: 247 GQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTY 306
G+ A ++ Q+ D PD ++N L+N C + A KL+ +++ K + PD TY
Sbjct: 364 GKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTY 423
Query: 307 GTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLY 361
G L+D ++ + ++ M++ P+ AVY L L + K+ A S +
Sbjct: 424 GLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFF 478
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/398 (21%), Positives = 167/398 (41%), Gaps = 34/398 (8%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRL-LERDGRGIRLSGYSSLIDGFFKARRYNEAHSL 67
++ T+N++ + K E A+ +L ++ ++ + L+ G +A +
Sbjct: 164 NIITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEI 223
Query: 68 YGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQR--GLLPDAHCYNAIIKGF 125
M G + D ++Y+ ++ G +K++ E+ ++ G + D Y ++KG+
Sbjct: 224 KEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGY 283
Query: 126 CDIGQLDHARSLHVEISGHDG--LHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFP 183
A + E G + + ++ + + G EA ++F+ ++K P
Sbjct: 284 FMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPP 343
Query: 184 SAV-----TFNALINGLCKAGKLDEAHLLFYKMEIGK-SPSLFFRLAQGSDHVSDSVSLQ 237
+ TFN ++NG C GK +EA +F +M K SP D++S
Sbjct: 344 RHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSP--------------DTLSFN 389
Query: 238 KKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLK 297
+ +C+ A KL ++ + V PD TY +L+++ K G ++ +K +
Sbjct: 390 NLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVES 449
Query: 298 GLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLA 357
L P+ Y L D L + + +DA D M+ + A YK +M L ++
Sbjct: 450 NLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSKLKMDDEA-YKFIMRALSEAGRLDEM 508
Query: 358 FSLYLEYLKSLPGRDNDSINALEEY--FMKGEVERAIR 393
+ E L D+D++ EE F+K E+ + R
Sbjct: 509 LKIVDEML------DDDTVRVSEELQEFVKEELRKGGR 540
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 64/134 (47%)
Query: 4 RRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNE 63
R +L TFNV++NG+C GK EEA+ + R + +++L++ E
Sbjct: 344 RHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAE 403
Query: 64 AHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIK 123
A LYG M + + PD Y +++ EG++ E + M++ L P+ YN +
Sbjct: 404 AEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQD 463
Query: 124 GFCDIGQLDHARSL 137
G+LD A+S
Sbjct: 464 QLIKAGKLDDAKSF 477
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 96/213 (45%), Gaps = 7/213 (3%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSG--YSSLIDGFFKARRYNE 63
F D + L+ G+ + +EA+ + +R+S Y+ +++ + +++E
Sbjct: 269 FVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDE 328
Query: 64 AHSLYGRMIKGGILP-----DVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCY 118
A L+ + K P ++ + +M+ G G+ EA+++F +M PD +
Sbjct: 329 ALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSF 388
Query: 119 NAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEK 178
N ++ CD L A L+ E+ + D T+ +L+ K+G + E + M +
Sbjct: 389 NNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVE 448
Query: 179 LGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM 211
P+ +N L + L KAGKLD+A F M
Sbjct: 449 SNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMM 481
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/332 (20%), Positives = 140/332 (42%), Gaps = 56/332 (16%)
Query: 146 GLHDTCTHTILICEMCKKGMVREAQ-----EMFNQMEKLGCFPSAVTFNALINGLCKAGK 200
++ C TI +R+A+ ++ + + G P+ +T+N + K
Sbjct: 121 SVYSNCRPTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRK 180
Query: 201 LDEAHLLFYKMEIGKSP-----SLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKL 255
E L YK+ I +P + F L +G + + +L+K +E +
Sbjct: 181 -PEIALEHYKLFIDNAPLNPSIATFRILVKG---LVSNDNLEKAME-------------I 223
Query: 256 LTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLK--GLSPDSVTYGTLIDGL 313
+A G V D Y+ L+ K + +G KL+++L+ K G D V YG L+ G
Sbjct: 224 KEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGY 283
Query: 314 YRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDN 373
+ E E++A + C Y+ + + + ++A++ LE L S G+ +
Sbjct: 284 FMKEMEKEAME---------C------YEEAVGENSKVRMSAMAYNYVLEAL-SENGKFD 327
Query: 374 DSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVL 433
+++ + + R + NL +++++ G+C K +EA+ +F +
Sbjct: 328 EALKLFDAVKKEHNPPRHLA-----------VNLGTFNVMVNGYCAGGKFEEAMEVFRQM 376
Query: 434 DEFNININPTSCVHLISGLCAKRNLYDAVVIF 465
+F + + S +L++ LC L +A ++
Sbjct: 377 GDFKCSPDTLSFNNLMNQLCDNELLAEAEKLY 408
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 151/345 (43%), Gaps = 18/345 (5%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D + L++ K GK++ + + G L + +LIDG +A + +A Y
Sbjct: 501 DCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAY 560
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMI--QRGLLPDAHCYNAIIKGFC 126
G + + PD +++ ++ G V A + AEM + PD A++K C
Sbjct: 561 GILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACC 620
Query: 127 DIGQLDHARSLHVEISGHDGLHDTC-THTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
+ GQ++ A+ ++ I + G+ T +TI + K G A ++ M++ P
Sbjct: 621 NAGQVERAKEVYQMIHKY-GIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDE 679
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCE 245
V F+ALI+ A LDEA F ++ KS + RL ++S + C
Sbjct: 680 VFFSALIDVAGHAKMLDEA---FGILQDAKSQGI--RLG--------TISYSSLMGACCN 726
Query: 246 AGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVT 305
A A +L ++ + P I T N LI + C+ + A + +++ GL P+++T
Sbjct: 727 AKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTIT 786
Query: 306 YGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCR 350
Y L+ R + E +FK+ P+ + + + T LC+
Sbjct: 787 YSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRCI-TSLCK 830
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 162/389 (41%), Gaps = 56/389 (14%)
Query: 73 KGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLD 132
+ G+ D LY ++ + G+V ++F +M G+ + H + A+I G GQ+
Sbjct: 495 ESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVA 554
Query: 133 HARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALI 192
A + G++R P V FNALI
Sbjct: 555 KAFGAY-------------------------GILRSKN----------VKPDRVVFNALI 579
Query: 193 NGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNA 252
+ ++G +D A + +M+ P DH +S+ ++ C AGQ A
Sbjct: 580 SACGQSGAVDRAFDVLAEMKAETHPI-------DPDH----ISIGALMKACCNAGQVERA 628
Query: 253 YKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDG 312
++ + G+ + Y I +NS K+G+ + A ++KD++ K ++PD V + LID
Sbjct: 629 KEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDV 688
Query: 313 LYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRD 372
+ ++AF I Y +LM C K A LY E +KS+ R
Sbjct: 689 AGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELY-EKIKSIKLRP 747
Query: 373 N-DSINALEEYFMKG-EVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIF 430
++NAL +G ++ +A+ L E+ N YS+L++ +++ D+ + F
Sbjct: 748 TISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLA---SERKDDFEVSF 804
Query: 431 SVLDEFN---ININPTSCVHLISGLCAKR 456
+L + ++ N C I+ LC +R
Sbjct: 805 KLLSQAKGDGVSPNLIMC-RCITSLCKRR 832
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 128/314 (40%), Gaps = 42/314 (13%)
Query: 243 MCEAGQTLN-AYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSP 301
+C + Q + A +L + +SG+ D K Y LI+S K+G ++ F++F + G+
Sbjct: 476 VCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEA 535
Query: 302 DSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLY 361
+ T+G LIDG R + AF + +P V+ AL++ + + AF +
Sbjct: 536 NLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVL 595
Query: 362 LEYLKSLPGRDND--SINALEEYFMK-GEVERA-----------IRGLLEL--------- 398
E D D SI AL + G+VERA IRG E+
Sbjct: 596 AEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCS 655
Query: 399 ---DFRF--------RDFNLAP----YSILLIGFCQAKKVDEALIIFSVLDEFNININPT 443
D+ F ++ ++ P +S L+ AK +DEA I I +
Sbjct: 656 KSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTI 715
Query: 444 SCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICK-ELLECLLVSQDKRKYAIDLIG 502
S L+ C ++ A + LY K +L P I L L ++ A++ +
Sbjct: 716 SYSSLMGACCNAKDWKKA--LELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLD 773
Query: 503 RMKSRGYRLHKYQY 516
+K+ G + + Y
Sbjct: 774 EIKTLGLKPNTITY 787
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 133/341 (39%), Gaps = 56/341 (16%)
Query: 161 CKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLF 220
CKK R +E F + KL P+ TFN L++ + ++ A +
Sbjct: 446 CKKQ--RAVKEAF-RFTKLILNPTMSTFNMLMSVCASSQDIEGARGVL------------ 490
Query: 221 FRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCK 280
RL Q S +D + ++G+ +++ Q+++SGV ++ T+ LI+ +
Sbjct: 491 -RLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCAR 549
Query: 281 AGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHML--KHVCEPSF 338
AG + AF + L+ K + PD V + LI + + AF + M H +P
Sbjct: 550 AGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDH 609
Query: 339 AVYKALMTWLCRGKKISLAFSLYL---EY-LKSLPGRDNDSINAL--------------- 379
ALM C ++ A +Y +Y ++ P ++N+
Sbjct: 610 ISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKD 669
Query: 380 --------EEYFMKGEVERAIR--------GLLELDFRFRDFNLA--PYSILLIGFCQAK 421
+E F ++ A G+L+ D + + L YS L+ C AK
Sbjct: 670 MKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQ-DAKSQGIRLGTISYSSLMGACCNAK 728
Query: 422 KVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAV 462
+AL ++ + + ++ LI+ LC L A+
Sbjct: 729 DWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAM 769
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 123/518 (23%), Positives = 220/518 (42%), Gaps = 40/518 (7%)
Query: 11 ATFNVLLNGFCKQGKLEEAVSLLR-LLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYG 69
T ++L+ FCKQGKL+EA LR LL D G SG L+D R++ EA L
Sbjct: 252 VTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCG-SGLGILVDALCSKRKFQEATKLLD 310
Query: 70 RMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHC------YNAIIK 123
+ G + Y I +R L G + A+ +Q+ + P C YN+++
Sbjct: 311 EIKLVGTVNMDRAYNIWIRALIKAGFLNNP----ADFLQK-ISPLEGCELEVFRYNSMVF 365
Query: 124 GFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFP 183
LD + E+ + T +C CK G V EA E++ ++G P
Sbjct: 366 QLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAP 425
Query: 184 SAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHM 243
+A+++N LI+ LC +++A+ + + A H + +
Sbjct: 426 TAMSYNYLIHTLCANESVEQAYDV-------------LKGAIDRGHFLGGKTFSTLTNAL 472
Query: 244 CEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDS 303
C G+ A +L+ A+ ++P +I++ C G + A + + G+
Sbjct: 473 CWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSF 532
Query: 304 VTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCR---GKKISLAFSL 360
+ +LI G + R + A K+ M + P+ ++Y+ ++ +C G+K F+
Sbjct: 533 KMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKN--FFTT 590
Query: 361 YLEYLKSLPGRDNDSINALEE---YFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGF 417
L++ SL + N E + K ++ R + +++ D +A ++L +
Sbjct: 591 LLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITP--TVASNILMLQSY 648
Query: 418 CQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGP 477
+ +K+ +AL F L E V +I GLC K N D + FL + KG L P
Sbjct: 649 LKNEKIADALHFFHDLREQGKTKKRLYQV-MIVGLC-KANKLDDAMHFLEEM-KGEGLQP 705
Query: 478 KI-CKELLECLLVSQDKRKYAIDLIGRMKSRGYRLHKY 514
I C E+ L +++K A+ L+ + G R+ +
Sbjct: 706 SIECYEVNIQKLCNEEKYDEAVGLVNEFRKSGRRITAF 743
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 126/284 (44%), Gaps = 29/284 (10%)
Query: 50 SLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQR 109
+L+ G+ A R + A +G M G+ D Y ++L L E +F ++ R
Sbjct: 187 ALVVGYAVAGRTDIALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISVR 246
Query: 110 GLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREA 169
G + A ++ ++K FC G+LD A + +D IL+ +C K +EA
Sbjct: 247 GFVC-AVTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEA 305
Query: 170 QEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYK--------MEIGKSPSLFF 221
++ ++++ +G +N I L KAG L+ K +E+ + S+ F
Sbjct: 306 TKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVF 365
Query: 222 RLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKA 281
+L + ++ D V Y +LT++ GV P+ KT N + FCKA
Sbjct: 366 QLLKENN--LDGV------------------YDILTEMMVRGVSPNKKTMNAALCFFCKA 405
Query: 282 GNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKI 325
G ++ A +L++ G +P +++Y LI L E E A+ +
Sbjct: 406 GFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDV 449
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 150/369 (40%), Gaps = 17/369 (4%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M +R + T N L FCK G ++EA+ L R G Y+ LI
Sbjct: 383 MMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANES 442
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+A+ + I G ++ + L +G+ A ++ +R LLP
Sbjct: 443 VEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCK 502
Query: 121 IIKGFCDIGQLDHARSLH--VEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEK 178
II CD+G+++ A ++ SG D T I +G + A ++ +M++
Sbjct: 503 IISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDI--AAKLIIRMQE 560
Query: 179 LGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQK 238
G P+ + +I +C +++ F+ + SL+ +H + +L
Sbjct: 561 KGYTPTRSLYRNVIQCVC---EMESGEKNFFTTLLKFQLSLW-------EHKVQAYNLF- 609
Query: 239 KVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKG 298
+E AG+ A + + G+ P + + +++ S+ K + A F DL+ +G
Sbjct: 610 -IEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQG 668
Query: 299 LSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAF 358
+ + Y +I GL + + +DA + M +PS Y+ + LC +K A
Sbjct: 669 KTKKRL-YQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAV 727
Query: 359 SLYLEYLKS 367
L E+ KS
Sbjct: 728 GLVNEFRKS 736
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 96/417 (23%), Positives = 162/417 (38%), Gaps = 23/417 (5%)
Query: 119 NAIIKGFCDIGQLDHARSLHVEISGHDGLH-DTCTHTILICEMCKKGMVREAQEMFNQME 177
+A++ G+ G+ D A H GL D+ + +L+ + ++ +F+Q+
Sbjct: 186 DALVVGYAVAGRTDIALQ-HFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQIS 244
Query: 178 KLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQ 237
G F AVT + L+ CK GKLDEA + R +D L
Sbjct: 245 VRG-FVCAVTHSILVKKFCKQGKLDEAED-------------YLRALLPNDPAGCGSGLG 290
Query: 238 KKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQ-L 296
V+ +C + A KLL ++ G V + YNI I + KAG +N + + L
Sbjct: 291 ILVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPL 350
Query: 297 KGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISL 356
+G + Y +++ L + + + I M+ P+ A + + C+ +
Sbjct: 351 EGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDE 410
Query: 357 AFSLYLEYLKSLPGRDNDSINALEEYFMKGE-VERAIRGLLELDFRFRDFNLAPYSILLI 415
A LY + S N L E VE+A L R +S L
Sbjct: 411 ALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTN 470
Query: 416 GFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFEL 475
C K D A + E ++ + +IS LC + DA++I G +
Sbjct: 471 ALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDT 530
Query: 476 GPKICKELL--ECLLVSQDKRKYAIDLIGRMKSRGYRLHKYQYRQTISLLQQLQEGK 530
K+ L+ L+ D A LI RM+ +GY + YR I + +++ G+
Sbjct: 531 SFKMFTSLIYGSITLMRGD---IAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGE 584
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 107/251 (42%), Gaps = 22/251 (8%)
Query: 44 RLSGYSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMF 103
++ Y+ I+G A + A +Y M + GI P V +ML+ ++ +A+ F
Sbjct: 602 KVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFF 661
Query: 104 AEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCT-HTILICEMCK 162
++ ++G Y +I G C +LD A E+ G +GL + + + I ++C
Sbjct: 662 HDLREQGK-TKKRLYQVMIVGLCKANKLDDAMHFLEEMKG-EGLQPSIECYEVNIQKLCN 719
Query: 163 KGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKME--IGKSPSLF 220
+ EA + N+ K G +A N L++ K+ + EA +E I + SL
Sbjct: 720 EEKYDEAVGLVNEFRKSGRRITAFIGNVLLHNAMKSKGVYEAWTRMRNIEDKIPEMKSLG 779
Query: 221 FRLAQGSDHVSDSVSLQKKVE-----------------HMCEAGQTLNAYKLLTQLADSG 263
+ S + V L++ E M Q +AY+++ ++A G
Sbjct: 780 ELIGLFSGRIDMEVELKRLDEVIEKCYPLDMYTYNMLLRMIVMNQAEDAYEMVERIARRG 839
Query: 264 VVPDIKTYNIL 274
VP+ +T IL
Sbjct: 840 YVPNERTDMIL 850
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 147/328 (44%), Gaps = 31/328 (9%)
Query: 13 FNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY---- 68
F++L+ +++ AV ++R L G ++S ++LI + R + + +Y
Sbjct: 165 FDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVF 224
Query: 69 ---------GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQR-GLLPDAHCY 118
+ + G I P+ + M+ EG +++ EM + G P+ + Y
Sbjct: 225 GLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSY 284
Query: 119 NAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEK 178
N +++ +C G + A + E+ ++D + +I +C V +A+E+F M
Sbjct: 285 NVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGL 344
Query: 179 LGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQK 238
G + +T+ L+NG CKAG +D +++ +M+ +G + +D ++++
Sbjct: 345 KGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMK-----------RKGFE--ADGLTIEA 391
Query: 239 KVEHMCE--AGQTLNAYKLLTQLA--DSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDL 294
VE +C+ GQ + + + A ++ P Y +L+ C+ G M+ A + ++
Sbjct: 392 LVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEM 451
Query: 295 QLKGLSPDSVTYGTLIDGLYRVEREEDA 322
KG P TY IDG V EE +
Sbjct: 452 VGKGFKPSQETYRAFIDGYGIVGDEETS 479
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 85/186 (45%), Gaps = 21/186 (11%)
Query: 166 VREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKME--IGKSPSLFFRL 223
V EA++M +++ P+A TFN+++ + G+ + ++ +ME +G SP+++
Sbjct: 231 VDEAKKMIGKIK-----PNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVY--- 282
Query: 224 AQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGN 283
S +E C G A K+ ++ GVV DI YN +I C
Sbjct: 283 -----------SYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFE 331
Query: 284 MNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKA 343
+ A +LF+D+ LKG+ +TY L++G + + + M + E +A
Sbjct: 332 VVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEA 391
Query: 344 LMTWLC 349
L+ LC
Sbjct: 392 LVEGLC 397
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 91/209 (43%), Gaps = 8/209 (3%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
++ ++NVL+ +C +G + EA + ++ G + Y+++I G +A L+
Sbjct: 280 NVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELF 339
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
M GI + Y ++ G G V + ++ EM ++G D A+++G CD
Sbjct: 340 RDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCD- 398
Query: 129 GQLDHARSLHVEISGHDGLHDTC------THTILICEMCKKGMVREAQEMFNQMEKLGCF 182
D R + D + + + +L+ +C+ G + A + +M G
Sbjct: 399 -DRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFK 457
Query: 183 PSAVTFNALINGLCKAGKLDEAHLLFYKM 211
PS T+ A I+G G + + LL +M
Sbjct: 458 PSQETYRAFIDGYGIVGDEETSALLAIEM 486
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/321 (20%), Positives = 129/321 (40%), Gaps = 35/321 (10%)
Query: 252 AYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDL-------------QLKG 298
A ++ +L G+ I T N LI + + +K+++++ +
Sbjct: 181 AVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVFGLDDVSVDEAKKMIGK 240
Query: 299 LSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHV-CEPSFAVYKALMTWLCRGKKISLA 357
+ P++ T+ +++ YR E +I M + V C P+ Y LM C +S A
Sbjct: 241 IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEA 300
Query: 358 FSLYLEYLKSLPGRD----NDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSIL 413
++ E D N I L F EV +A ++ + + Y L
Sbjct: 301 EKVWEEMKVRGVVYDIVAYNTMIGGLCSNF---EVVKAKELFRDMGLKGIECTCLTYEHL 357
Query: 414 LIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRN---LYDAVVIFLYSLD 470
+ G+C+A VD L+++ + + + L+ GLC R+ + +A I ++
Sbjct: 358 VNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVR 417
Query: 471 KGFELGPKICKELLECLLVSQDKRKYAIDLIGRMKSRGYRLHKYQYRQTI---------- 520
+ + C ELL L K A+++ M +G++ + YR I
Sbjct: 418 EAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVGDEE 477
Query: 521 -SLLQQLQEGKAVKLFSEDNT 540
S L ++ +++KL +E+ +
Sbjct: 478 TSALLAIEMAESLKLRAEEES 498
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 67/135 (49%), Gaps = 4/135 (2%)
Query: 12 TFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKAR---RYNEAHSLY 68
T+ L+NG+CK G ++ + + R ++R G +L++G R R EA +
Sbjct: 353 TYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIV 412
Query: 69 GRMIKGGIL-PDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCD 127
++ + P Y ++++ L +G++ A+ + AEM+ +G P Y A I G+
Sbjct: 413 KDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGI 472
Query: 128 IGQLDHARSLHVEIS 142
+G + + L +E++
Sbjct: 473 VGDEETSALLAIEMA 487
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 143/334 (42%), Gaps = 26/334 (7%)
Query: 31 SLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGL 90
SL + R G I ++ +I + + N A + M G++P + ++ L
Sbjct: 699 SLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVL 758
Query: 91 -SNEGR-VGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLH 148
+GR V EA + F EMI+ G +PD + C++G A+S ++ G G
Sbjct: 759 CEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSC-LDSLGKIGFP 817
Query: 149 DTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLF 208
T ++I I +C+ G + EA E T+ ++++GL + G L +A
Sbjct: 818 VTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKV 877
Query: 209 YKM-EIGKSPSLFFRLAQGSDHVSDSVSL----QKKVEHMCEAGQTLNAYKLLTQLADSG 263
M EIG P + HV S+ + +K++E + E Q +
Sbjct: 878 NSMKEIGTKPGV---------HVYTSLIVYFFKEKQLEKVLETCQKMEG---------ES 919
Query: 264 VVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAF 323
P + TY +I + G + A+ F++++ +G SPD TY I+ L + + EDA
Sbjct: 920 CEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDAL 979
Query: 324 KIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLA 357
K+ ML PS ++ + L R K LA
Sbjct: 980 KLLSEMLDKGIAPSTINFRTVFYGLNREGKHDLA 1013
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/334 (20%), Positives = 148/334 (44%), Gaps = 23/334 (6%)
Query: 3 MRR--FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
MR+ F+ D +N+++ C G+ + A+ + + G L Y L+D K+ +
Sbjct: 250 MRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEK 309
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+ S+ M++ + + + +L+ G++ EA+++ E+ + + DA +
Sbjct: 310 VDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEI 369
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
++KG C ++ A + V+I L D+ + I+I ++ V +A E F ++K G
Sbjct: 370 LVKGLCRANRMVDALEI-VDIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSG 428
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKK 239
P T+ ++ L K + ++ LF +M E G P DSV++
Sbjct: 429 RPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEP--------------DSVAITAV 474
Query: 240 VEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGL 299
V + A+K+ + + + G+ P K+Y+I + C++ + K+F + +
Sbjct: 475 VAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKI 534
Query: 300 SPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHV 333
+ +I + E++ K + H++K +
Sbjct: 535 VIRDDIFSWVISSM-----EKNGEKEKIHLIKEI 563
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/363 (21%), Positives = 156/363 (42%), Gaps = 33/363 (9%)
Query: 2 WMRR---FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKA 58
W+++ F + +N +L+ + L+ L+ +E++G + ++ LI + KA
Sbjct: 178 WVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKA 237
Query: 59 RRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCY 118
++ + ++ +M K G D Y IM+R L GR A++ + EM+++G+ Y
Sbjct: 238 KKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTY 297
Query: 119 NAIIKGFCDIGQLDHARSLH------VEISGHDGLHDTCTHTILICEMCKKGMVREAQEM 172
++ ++D +S+ EIS HD L+ C G ++EA E+
Sbjct: 298 KMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFG------YLLKSFCVSGKIKEALEL 351
Query: 173 FNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGK--SPSLFFRLAQGSDHV 230
+++ A F L+ GLC+A ++ +A + M+ K +++ + G
Sbjct: 352 IRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNVYGIIISGYLRQ 411
Query: 231 SDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKL 290
+D + L ++++ + SG P + TY ++ K L
Sbjct: 412 ND-------------VSKALEQFEVIKK---SGRPPRVSTYTEIMQHLFKLKQFEKGCNL 455
Query: 291 FKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCR 350
F ++ G+ PDSV ++ G R +A+K+ M + +P++ Y + LCR
Sbjct: 456 FNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCR 515
Query: 351 GKK 353
+
Sbjct: 516 SSR 518
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 124/311 (39%), Gaps = 18/311 (5%)
Query: 58 ARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHC 117
+ + + SL+ M + G L +AIM+ G A++ F EM GL+P +
Sbjct: 691 GKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSST 750
Query: 118 YNAIIKGFCDIG--QLDHARSLHVEISGHDGLHD-TCTHTILICEMCKKGMVREAQEMFN 174
+ +I C+ ++ A E+ + D L C +C+ G ++A+ +
Sbjct: 751 FKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGC-LCEVGNTKDAKSCLD 809
Query: 175 QMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSV 234
+ K+G FP V ++ I LC+ GKL+EA E G + D
Sbjct: 810 SLGKIG-FPVTVAYSIYIRALCRIGKLEEALSELASFE-------------GERSLLDQY 855
Query: 235 SLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDL 294
+ V + + G A + + + G P + Y LI F K + + + +
Sbjct: 856 TYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKM 915
Query: 295 QLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKI 354
+ + P VTY +I G + + E+A+ +M + P F Y + LC+ K
Sbjct: 916 EGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKS 975
Query: 355 SLAFSLYLEYL 365
A L E L
Sbjct: 976 EDALKLLSEML 986
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 148/381 (38%), Gaps = 52/381 (13%)
Query: 97 GEAVKMFAEMI--QRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHT 154
G AV F + + G ++ YN IK RSL E+ L T
Sbjct: 658 GNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWA 717
Query: 155 ILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLC--KAGKLDEAHLLFYKME 212
I+I + + G+ A F +M+ +G PS+ TF LI LC K ++EA F +M
Sbjct: 718 IMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREM- 776
Query: 213 IGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYN 272
R S V D +Q + +CE G T +A L L G P Y+
Sbjct: 777 --------IR----SGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYS 823
Query: 273 ILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKH 332
I I + C+ G + A + + D TYG+++ GL + + A + M +
Sbjct: 824 IYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEI 883
Query: 333 VCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEVERAI 392
+P VY +L+ + +F + ++E+ +
Sbjct: 884 GTKPGVHVYTSLIVY----------------------------------FFKEKQLEKVL 909
Query: 393 RGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGL 452
+++ + ++ Y+ ++ G+ KV+EA F ++E + + + I+ L
Sbjct: 910 ETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCL 969
Query: 453 CAKRNLYDAVVIFLYSLDKGF 473
C DA+ + LDKG
Sbjct: 970 CQACKSEDALKLLSEMLDKGI 990
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 100/230 (43%), Gaps = 8/230 (3%)
Query: 17 LNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKGGI 76
L C+ G ++A S L L + G + ++ YS I + + EA S
Sbjct: 792 LGCLCEVGNTKDAKSCLDSLGKIGFPVTVA-YSIYIRALCRIGKLEEALSELASFEGERS 850
Query: 77 LPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARS 136
L D Y ++ GL G + +A+ M + G P H Y ++I F QL+
Sbjct: 851 LLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLE 910
Query: 137 LHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLC 196
++ G T+T +IC G V EA F ME+ G P T++ IN LC
Sbjct: 911 TCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLC 970
Query: 197 KAGKLDEAHLLFYKM-EIGKSPS------LFFRLAQGSDHVSDSVSLQKK 239
+A K ++A L +M + G +PS +F+ L + H ++LQKK
Sbjct: 971 QACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKHDLARIALQKK 1020
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 149/351 (42%), Gaps = 24/351 (6%)
Query: 118 YNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQME 177
YN ++ + LD L E+ + D T TILI K + + +F +M
Sbjct: 192 YNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMR 251
Query: 178 KLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQ 237
K G A +N +I LC AG+ D A L FYK + K + R + + D ++
Sbjct: 252 KSGFELDATAYNIMIRSLCIAGRGDLA-LEFYKEMMEKGITFGLRTYK---MLLDCIAKS 307
Query: 238 KKVEHMCEAGQTLNAYKLLTQLADSGV----VPDIKTYNILINSFCKAGNMNGAFKLFKD 293
+KV+ ++ +AD V + + + L+ SFC +G + A +L ++
Sbjct: 308 EKVD-------------VVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRE 354
Query: 294 LQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKK 353
L+ K + D+ + L+ GL R R DA +I D M + + S VY +++ R
Sbjct: 355 LKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDS-NVYGIIISGYLRQND 413
Query: 354 ISLAFSLYLEYLKS-LPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSI 412
+S A + KS P R + ++ F + E+ E+ + + +
Sbjct: 414 VSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITA 473
Query: 413 LLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVV 463
++ G +V EA +FS ++E I S + LC + + YD ++
Sbjct: 474 VVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELC-RSSRYDEII 523
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 109/234 (46%), Gaps = 10/234 (4%)
Query: 215 KSPSL---FFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAY-KLLTQLADSGVVPDIKT 270
K P L FF + D S V + + + + L+ +L++++ +G DI+T
Sbjct: 167 KVPHLAMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRT 226
Query: 271 YNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHML 330
+ ILI+ + KA + +F+ ++ G D+ Y +I L R + A + M+
Sbjct: 227 WTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMM 286
Query: 331 KHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYF-MKGEVE 389
+ YK L+ + + +K+ + S+ + ++ ++D+ L + F + G+++
Sbjct: 287 EKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIK 346
Query: 390 RAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSV-----LDEFNI 438
A+ + EL + + + IL+ G C+A ++ +AL I + LD+ N+
Sbjct: 347 EALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNV 400
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 89/182 (48%), Gaps = 13/182 (7%)
Query: 164 GMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRL 223
G + A E+ M GC+PS+ +FN ++N L A DE H +F +P L +
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVS-----APKLGVEI 200
Query: 224 AQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGN 283
D+ L ++ +CE+G A +LL + P++ T++ LI FC G
Sbjct: 201 --------DACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGK 252
Query: 284 MNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKA 343
AFKL + ++ + + PD++T+ LI GL + R E+ + + M CEP+ Y+
Sbjct: 253 FEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQE 312
Query: 344 LM 345
++
Sbjct: 313 VL 314
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 111/244 (45%), Gaps = 15/244 (6%)
Query: 24 GKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILY 83
G++ A+ +L + G ++ +++ A+ ++E H ++ K G+ D
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCL 205
Query: 84 AIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISG 143
I+++GL G + A+++ E Q+ P+ ++ +I+GFC+ G+ + A L +
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 144 HDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLC-KAGKLD 202
DT T ILI + KKG V E ++ +M+ GC P+ T+ ++ GL K L+
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE 325
Query: 203 EAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADS 262
++ + G PS +S +K V +CE + +L Q+ +
Sbjct: 326 AKEMMSQMISWGMRPSF--------------LSYKKMVLGLCETKSVVEMDWVLRQMVNH 371
Query: 263 GVVP 266
G VP
Sbjct: 372 GFVP 375
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 87/203 (42%), Gaps = 35/203 (17%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D N+L+ G C+ G LE A+ LL + + +S LI GF ++ EA L
Sbjct: 201 DACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLL 260
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
RM K I PD I + I++ GL +GRV E + + M +G P+ Y ++ G
Sbjct: 261 ERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGL--- 317
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
LD R+L EA+EM +QM G PS +++
Sbjct: 318 --LDKKRNL------------------------------EAKEMMSQMISWGMRPSFLSY 345
Query: 189 NALINGLCKAGKLDEAHLLFYKM 211
++ GLC+ + E + +M
Sbjct: 346 KKMVLGLCETKSVVEMDWVLRQM 368
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 122/311 (39%), Gaps = 50/311 (16%)
Query: 46 SGYSSLIDGFFKARRYNEAHSLYG--RMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMF 103
S Y+ +I+ F +A+ Y+E + ++ K + Y +M + GR+ A+++
Sbjct: 96 SLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAIEIL 155
Query: 104 AEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKK 163
M G P + +N I+ D + V D C ILI +C+
Sbjct: 156 FGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCES 215
Query: 164 GMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRL 223
G + A ++ ++ + P+ +TF+ LI G
Sbjct: 216 GNLEAALQLLDEFPQQKSRPNVMTFSPLIRGF---------------------------- 247
Query: 224 AQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGN 283
C G+ A+KLL ++ + PD T+NILI+ K G
Sbjct: 248 --------------------CNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGR 287
Query: 284 MNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKA 343
+ L + +++KG P+ TY ++ GL +R +A ++ M+ PSF YK
Sbjct: 288 VEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKK 347
Query: 344 LMTWLCRGKKI 354
++ LC K +
Sbjct: 348 MVLGLCETKSV 358
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 112/254 (44%), Gaps = 15/254 (5%)
Query: 58 ARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHC 117
A R N A + M G P + +L L + E K+F + G+ DA C
Sbjct: 145 AGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACC 204
Query: 118 YNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQME 177
N +IKG C+ G L+ A L E + T + LI C KG EA ++ +ME
Sbjct: 205 LNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERME 264
Query: 178 KLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEI-GKSPSLFFRLAQGSDHVSDSVSL 236
K P +TFN LI+GL K G+++E L +M++ G P + +
Sbjct: 265 KERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEP--------------NPGTY 310
Query: 237 QKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQL 296
Q+ + + + + L A ++++Q+ G+ P +Y ++ C+ ++ + + +
Sbjct: 311 QEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVN 370
Query: 297 KGLSPDSVTYGTLI 310
G P ++ + ++
Sbjct: 371 HGFVPKTLMWWKVV 384
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 58/119 (48%)
Query: 5 RFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEA 64
R + D TFN+L++G K+G++EE + LL ++ G Y ++ G +R EA
Sbjct: 267 RIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEA 326
Query: 65 HSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIK 123
+ +MI G+ P + Y M+ GL V E + +M+ G +P + +++
Sbjct: 327 KEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQ 385
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 106/490 (21%), Positives = 206/490 (42%), Gaps = 46/490 (9%)
Query: 14 NVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIK 73
N LL G G + A L + G + G+ I F ++ N+ L + K
Sbjct: 156 NRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKK 215
Query: 74 GGI-LPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLD 132
+ + I+ ++L L R +A + E+ PD Y I + F G L
Sbjct: 216 ANLNINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNL- 274
Query: 133 HARSLHVEISGHDGLHD-TCTHTILICEMCKKGMVREAQEMFNQMEKLGCFP-SAVTFNA 190
+ R + ++ G+ + + I ++ + EA+E+ + G FP +A
Sbjct: 275 YERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVS-GKFPMDNDILDA 333
Query: 191 LINGLCKAGKLDEAHLLFYKMEIGKSPSL--FFRLAQG------SDHV------------ 230
LI + L Y + GK P++ +L++ SDH+
Sbjct: 334 LIGSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGY 393
Query: 231 -SDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFK 289
S+ S + +C+AG+ +Y L ++ G+ PD+ YN LI + CKA + A K
Sbjct: 394 FSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKK 453
Query: 290 LFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLC 349
L+ ++ ++G + TY LI L E++ ++ D ML+ EP +Y +L+ LC
Sbjct: 454 LWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLC 513
Query: 350 RGKKISLAFSLYLEYLKSLPGRDNDSIN--ALEEYFM-------KGEVERAIRGLLELDF 400
+ KI A ++ + ++ RD+ ++ L E+ + GE + +R L+
Sbjct: 514 KETKIEAAMEVFRKCME----RDHKTVTRRVLSEFVLNLCSNGHSGEASQLLREREHLE- 568
Query: 401 RFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYD 460
+ + +LL AK+V+ + + E + ++ T L++ C+ + D
Sbjct: 569 -----HTGAHVVLLKCVADAKEVEIGIRHMQWIKEVSPSLVHTISSDLLASFCSSSD-PD 622
Query: 461 AVVIFLYSLD 470
+++ F+ +++
Sbjct: 623 SILPFIRAIE 632
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 95/174 (54%), Gaps = 5/174 (2%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
+L +++++++ CK G++ E+ + L+ ++++G +S Y++LI+ KA A L+
Sbjct: 396 ELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLW 455
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
M G ++ Y +++R LS EG E++++F +M++RG+ PD Y ++I+G C
Sbjct: 456 DEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKE 515
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTIL---ICEMCKKGMVREAQEMFNQMEKL 179
+++ A + + D H T T +L + +C G EA ++ + E L
Sbjct: 516 TKIEAAMEVFRKCMERD--HKTVTRRVLSEFVLNLCSNGHSGEASQLLREREHL 567
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 84/481 (17%), Positives = 175/481 (36%), Gaps = 101/481 (20%)
Query: 47 GYSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEM 106
Y S+ +R+++ +L+ ++ IL D +Y ++ L + A + E
Sbjct: 84 SYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSVYRSLIDTLVLGRKAQSAFWVLEEA 143
Query: 107 IQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDG-------------------- 146
G N ++ G G D+A+ L V++ H G
Sbjct: 144 FSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMR-HKGVSLNTLGFGVYIGWFCRSSE 202
Query: 147 -----------------LHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFN 189
++ + +++ +CK +A + ++ + C P + +
Sbjct: 203 TNQLLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYR 262
Query: 190 ALINGLCKAGKLDEAHLLF-YKMEIGKSPSLFFRLAQGSDHVSDSVSLQ-----KKVEHM 243
+ G L E ++ K ++G +P R + + D +S + K+V +
Sbjct: 263 VIAEAFVVTGNLYERQVVLKKKRKLGVAP----RSSDYRAFILDLISAKRLTEAKEVAEV 318
Query: 244 CEAGQ-------------------TLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNM 284
+G+ +A + L + +G +P I+T + L + C+
Sbjct: 319 IVSGKFPMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKS 378
Query: 285 NGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKAL 344
+ K ++ L KG + +Y +I L + R +++ M K P ++Y AL
Sbjct: 379 DHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNAL 438
Query: 345 MTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRD 404
+ C+ + I A L+ +E F++G
Sbjct: 439 IEACCKAEMIRPAKKLW------------------DEMFVEG----------------CK 464
Query: 405 FNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVI 464
NL Y++L+ + + +E+L +F + E I + T + LI GLC + + A+ +
Sbjct: 465 MNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEV 524
Query: 465 F 465
F
Sbjct: 525 F 525
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 151/359 (42%), Gaps = 14/359 (3%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
DL + ++ F + + A+ L E G +++L+ + + A S++
Sbjct: 185 DLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVF 244
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
KG I D Y IM+ G S G V E K+ EM++ G PD Y+ +I+G
Sbjct: 245 NAK-KGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRT 303
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
G+++ + + I + D + +IC E+ + +M C P+ T+
Sbjct: 304 GRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETY 363
Query: 189 NALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQ 248
+ L++GL K K+ +A +F +M L++G + V+ ++ +C G
Sbjct: 364 SKLVSGLIKGRKVSDALEIFEEM-----------LSRGVLPTTGLVT--SFLKPLCSYGP 410
Query: 249 TLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGT 308
A + + +G Y +L+ + G ++ ++Q G D Y
Sbjct: 411 PHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEY 470
Query: 309 LIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKS 367
++DGL + E+A + + ++ P+ VY L + L K LA+ L+L+ K+
Sbjct: 471 IVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKIKKA 529
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/404 (21%), Positives = 157/404 (38%), Gaps = 58/404 (14%)
Query: 75 GILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHA 134
G+ DV Y+++LR L + + M+ G+ PD C + F +
Sbjct: 146 GVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVH----- 200
Query: 135 RSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALING 194
VR A E+F + E G S +FNAL+
Sbjct: 201 ------------------------------YVRRAIELFEESESFGVKCSTESFNALLRC 230
Query: 195 LCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYK 254
LC+ + A +F A+ + DS S + + G+ K
Sbjct: 231 LCERSHVSAAKSVFN--------------AKKGNIPFDSCSYNIMISGWSKLGEVEEMEK 276
Query: 255 LLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLY 314
+L ++ +SG PD +Y+ LI + G +N + ++F +++ KG PD+ Y +I
Sbjct: 277 VLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFI 336
Query: 315 RVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDND 374
+++ + ML CEP+ Y L++ L +G+K+S A ++ E L R
Sbjct: 337 SARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEML----SRGVL 392
Query: 375 SINALEEYFMK-----GEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALII 429
L F+K G A+ + + + Y +LL + K L +
Sbjct: 393 PTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNV 452
Query: 430 FSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGF 473
+ + E + +++ GLC +L +AV++ ++ KGF
Sbjct: 453 WDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGF 496
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 116/279 (41%), Gaps = 49/279 (17%)
Query: 71 MIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQ 130
M+ G+ PD+ I + V A+++F E G+ +NA+++ C+
Sbjct: 177 MVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSH 236
Query: 131 LDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNA 190
+ A+S+ G+ D+C++ I+I K G V E +++ +M + G P ++++
Sbjct: 237 VSAAKSVFNAKKGNIPF-DSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSH 295
Query: 191 LINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTL 250
LI GL + G+++ DSV + ++H
Sbjct: 296 LIEGLGRTGRIN-----------------------------DSVEIFDNIKH-------- 318
Query: 251 NAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLI 310
G VPD YN +I +F A + + + + ++ + + P+ TY L+
Sbjct: 319 -----------KGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLV 367
Query: 311 DGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLC 349
GL + + DA +I + ML P+ + + + LC
Sbjct: 368 SGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLC 406
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 110/218 (50%), Gaps = 5/218 (2%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
F D +++ L+ G + G++ ++V + ++ G + Y+++I F AR ++E+
Sbjct: 286 FGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESM 345
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
Y RM+ P++ Y+ ++ GL +V +A+++F EM+ RG+LP + +K
Sbjct: 346 RYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPL 405
Query: 126 CDIGQLDHARSLHVEISGHDGLH-DTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPS 184
C G HA + + S G + +L+ + + G ++++M++ G +PS
Sbjct: 406 CSYGP-PHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESG-YPS 463
Query: 185 AV-TFNALINGLCKAGKLDEAHLLFYK-MEIGKSPSLF 220
V + +++GLC G L+ A L+ + M G P+ F
Sbjct: 464 DVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRF 501
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 150/355 (42%), Gaps = 68/355 (19%)
Query: 4 RRFQRDLAT--FNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKA-RR 60
+RF+ ++ F LL+ C+ + +A L+ +D ++ +++G+
Sbjct: 224 KRFKLEMGIDDFQSLLSALCRYKNVSDAGHLI-FCNKDKYPFDAKSFNIVLNGWCNVIGS 282
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
EA ++ M G+ DV+ Y+ M+ S G + + +K+F M + + PD YNA
Sbjct: 283 PREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNA 342
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEK-L 179
++ HA + K V EA+ + ME+
Sbjct: 343 VV----------HA-------------------------LAKASFVSEARNLMKTMEEEK 367
Query: 180 GCFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSL-----FFRLAQGSDHVSDS 233
G P+ VT+N+LI LCKA K +EA +F +M E G P++ F R+ + + V
Sbjct: 368 GIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEV--- 424
Query: 234 VSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKD 293
++LL ++ G P ++TY +LI C+ + + L+ +
Sbjct: 425 -------------------FELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDE 465
Query: 294 LQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWL 348
++ K + PD +Y +I GL+ + E+A+ M P+ V + +W
Sbjct: 466 MKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSWF 520
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 127/311 (40%), Gaps = 54/311 (17%)
Query: 48 YSSLIDGFFKARRYNEAHSLYGRMIK-GGILPDVILYAIMLRGLSNEGRVGEAVKMFAEM 106
Y S+I K R+++ A +L M K L + IM+R VG+A+ F
Sbjct: 164 YHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAY 223
Query: 107 IQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMV 166
+ L + +++ C R +V +GH ++ C K
Sbjct: 224 KRFKLEMGIDDFQSLLSALC--------RYKNVSDAGH----------LIFCNKDK---- 261
Query: 167 REAQEMFNQMEKLGCFP-SAVTFNALINGLCKA-GKLDEAHLLFYKMEIGKSPSLFFRLA 224
+P A +FN ++NG C G EA ++ ME+G
Sbjct: 262 ---------------YPFDAKSFNIVLNGWCNVIGSPREAERVW--MEMGNV-------- 296
Query: 225 QGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNM 284
G H D VS + + G KL ++ + PD K YN ++++ KA +
Sbjct: 297 -GVKH--DVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFV 353
Query: 285 NGAFKLFKDLQL-KGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKA 343
+ A L K ++ KG+ P+ VTY +LI L + + E+A ++ D ML+ P+ Y A
Sbjct: 354 SEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHA 413
Query: 344 LMTWLCRGKKI 354
M L G+++
Sbjct: 414 FMRILRTGEEV 424
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 104/242 (42%), Gaps = 27/242 (11%)
Query: 86 MLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSL--HVEISG 143
+++ L EG V EA+ F M + PD + YN II C +G AR L +++ G
Sbjct: 171 LMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPG 230
Query: 144 HDGLHDTCTHTILICEMCKKGM-----------VREAQEMFNQMEKLGCFPSAVTFNALI 192
DT T+TILI C+ GM + EA MF +M G P VT+N LI
Sbjct: 231 FRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLI 290
Query: 193 NGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNA 252
+G CK ++ A LF M+ +G V + V+ + + + A
Sbjct: 291 DGCCKTNRIGRALELFEDMK-----------TKGC--VPNQVTYNSFIRYYSVTNEIEGA 337
Query: 253 YKLLTQLADSGV-VPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLID 311
+++ + G VP TY LI++ + A L ++ GL P TY + D
Sbjct: 338 IEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCD 397
Query: 312 GL 313
L
Sbjct: 398 AL 399
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 111/245 (45%), Gaps = 30/245 (12%)
Query: 140 EISGHDGLHDTCTHTILICEM-C--KKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLC 196
++S + + T + C M C ++G V+EA F +M++ C P +N +IN LC
Sbjct: 152 QVSRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALC 211
Query: 197 KAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAG--------- 247
+ G +A L +M++ G + D+ + + C G
Sbjct: 212 RVGNFKKARFLLDQMQL-----------PGFRYPPDTYTYTILISSYCRYGMQTGCRKAI 260
Query: 248 --QTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVT 305
+ A ++ ++ G VPD+ TYN LI+ CK + A +LF+D++ KG P+ VT
Sbjct: 261 RRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVT 320
Query: 306 YGTLIDGLYRVERE-EDAFKIRDHMLK--HVCEPSFAVYKALMTWLCRGKKISLAFSLYL 362
Y + I Y V E E A ++ M K H P + Y L+ L ++ + A L +
Sbjct: 321 YNSFIR-YYSVTNEIEGAIEMMRTMKKLGHGV-PGSSTYTPLIHALVETRRAAEARDLVV 378
Query: 363 EYLKS 367
E +++
Sbjct: 379 EMVEA 383
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 101/213 (47%), Gaps = 19/213 (8%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLI-----------DGFFK 57
D+ +N ++N C+ G ++A LL ++ G Y+ I G K
Sbjct: 199 DVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRK 258
Query: 58 A--RRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDA 115
A RR EA+ ++ M+ G +PDV+ Y ++ G R+G A+++F +M +G +P+
Sbjct: 259 AIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQ 318
Query: 116 HCYNAIIKGFCDIGQLDHARSLHVEIS--GHDGLHDTCTHTILICEMCKKGMVREAQEMF 173
YN+ I+ + +++ A + + GH G+ + T+T LI + + EA+++
Sbjct: 319 VTYNSFIRYYSVTNEIEGAIEMMRTMKKLGH-GVPGSSTYTPLIHALVETRRAAEARDLV 377
Query: 174 NQMEKLGCFPSAVTFNALINGLCKAG---KLDE 203
+M + G P T+ + + L G LDE
Sbjct: 378 VEMVEAGLVPREYTYKLVCDALSSEGLASTLDE 410
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 76/183 (41%), Gaps = 16/183 (8%)
Query: 225 QGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNM 284
+ +V + S+ ++ + E G A ++ + PD+ YN +IN+ C+ GN
Sbjct: 157 ENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNF 216
Query: 285 NGAFKLFKDLQLKGL--SPDSVTYGTLIDGLYRV-----------EREEDAFKIRDHMLK 331
A L +QL G PD+ TY LI R R +A ++ ML
Sbjct: 217 KKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLF 276
Query: 332 HVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDND-SINALEEYF-MKGEVE 389
P Y L+ C+ +I A L+ E +K+ N + N+ Y+ + E+E
Sbjct: 277 RGFVPDVVTYNCLIDGCCKTNRIGRALELF-EDMKTKGCVPNQVTYNSFIRYYSVTNEIE 335
Query: 390 RAI 392
AI
Sbjct: 336 GAI 338
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 121/280 (43%), Gaps = 15/280 (5%)
Query: 5 RFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEA 64
RF ++ T+ VLLNG+C+ L EA + + G + ++ +++G ++ + ++A
Sbjct: 292 RFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDA 351
Query: 65 HSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKG 124
L+ M G P+V Y IM+R + + A++ F +M+ GL PDA Y +I G
Sbjct: 352 IKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG 411
Query: 125 FCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPS 184
F +LD L E+ D T+ LI M + M ++N+M + PS
Sbjct: 412 FGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPS 471
Query: 185 AVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHM 243
TFN ++ A + ++ +M + G P D S + +
Sbjct: 472 IHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICP--------------DDNSYTVLIRGL 517
Query: 244 CEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGN 283
G++ A + L ++ D G+ + YN F + G
Sbjct: 518 ISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 557
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/374 (20%), Positives = 144/374 (38%), Gaps = 50/374 (13%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
F D T+N +++ K + E VS+L + G + + ++ + F A+ +A
Sbjct: 190 FAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAV 248
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
++ M K V +L L ++G+ ++ + ++ P+ Y ++ G+
Sbjct: 249 GIFELMKKYKFKIGVETINCLLDSLGR-AKLGKEAQVLFDKLKERFTPNMMTYTVLLNGW 307
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
C + L EA ++N M G P
Sbjct: 308 CRVRNLI-----------------------------------EAARIWNDMIDHGLKPDI 332
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCE 245
V N ++ GL ++ K +A LF+ M+ K P R S + C+
Sbjct: 333 VAHNVMLEGLLRSMKKSDAIKLFHVMK-SKGPCPNVR------------SYTIMIRDFCK 379
Query: 246 AGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVT 305
A + + DSG+ PD Y LI F ++ ++L K++Q KG PD T
Sbjct: 380 QSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKT 439
Query: 306 YGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYL 365
Y LI + + E +I + M+++ EPS + +M + + +++ E +
Sbjct: 440 YNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMI 499
Query: 366 KSLPGRDNDSINAL 379
K D++S L
Sbjct: 500 KKGICPDDNSYTVL 513
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 115/272 (42%), Gaps = 15/272 (5%)
Query: 108 QRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVR 167
++G D+ YN+++ Q + S+ E+ G GL T TI + +
Sbjct: 187 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEM-GTKGLLTMETFTIAMKAFAAAKERK 245
Query: 168 EAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGS 227
+A +F M+K T N L++ L +A EA +LF K++ +P++
Sbjct: 246 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNM-------- 297
Query: 228 DHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGA 287
++ + C + A ++ + D G+ PDI +N+++ ++ + A
Sbjct: 298 ------MTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDA 351
Query: 288 FKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTW 347
KLF ++ KG P+ +Y +I + E A + D M+ +P AVY L+T
Sbjct: 352 IKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG 411
Query: 348 LCRGKKISLAFSLYLEYLKSLPGRDNDSINAL 379
KK+ + L E + D + NAL
Sbjct: 412 FGTQKKLDTVYELLKEMQEKGHPPDGKTYNAL 443
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/387 (21%), Positives = 166/387 (42%), Gaps = 38/387 (9%)
Query: 4 RRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNE 63
R F++D+ T+N++++G+ +QG +E+A+ + +L+ + ++L+ +
Sbjct: 334 RMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKL 393
Query: 64 AHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIK 123
+ I+ D++L + ++ + G + +A K+F +++ L+ +N ++
Sbjct: 394 GKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLI----LWNTLLA 449
Query: 124 GFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFP 183
+ + G A L + + T ++I + + G V EA++MF QM+ G P
Sbjct: 450 AYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIP 509
Query: 184 SAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLF---------------------- 220
+ +++ ++NG+ + G +EA L KM E G P+ F
Sbjct: 510 NLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIH 569
Query: 221 ---FRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINS 277
R Q S VS SL V+ + G A K+ S + ++ N +I++
Sbjct: 570 GYIIRNLQHSSLVSIETSL---VDMYAKCGDINKAEKVF----GSKLYSELPLSNAMISA 622
Query: 278 FCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKI-RDHMLKHVCEP 336
+ GN+ A L++ L+ GL PD++T ++ A +I D + K +P
Sbjct: 623 YALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKP 682
Query: 337 SFAVYKALMTWLCRGKKISLAFSLYLE 363
Y ++ L + A L E
Sbjct: 683 CLEHYGLMVDLLASAGETEKALRLIEE 709
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 138/319 (43%), Gaps = 28/319 (8%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
++DL +N LL + + G EA+ L ++ +G + ++ +I + + +EA
Sbjct: 438 EKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKD 497
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
++ +M GI+P++I + M+ G+ G EA+ +M + GL P+A +
Sbjct: 498 MFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACA 557
Query: 127 DIGQLDHARSLH---VEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFP 183
+ L R++H + H L T L+ K G + +A+++F KL +
Sbjct: 558 HLASLHIGRTIHGYIIRNLQHSSL--VSIETSLVDMYAKCGDINKAEKVFGS--KL--YS 611
Query: 184 SAVTFNALINGLCKAGKLDEAHLLFYKME-IGKSPSLFFRLAQGSDHVSDSVSLQKKVEH 242
NA+I+ G L EA L+ +E +G P D++++ +
Sbjct: 612 ELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKP--------------DNITITNVLSA 657
Query: 243 MCEAGQTLNAYKLLTQLADS-GVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSP 301
AG A ++ T + + P ++ Y ++++ AG A +L +++ K P
Sbjct: 658 CNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFK---P 714
Query: 302 DSVTYGTLIDGLYRVEREE 320
D+ +L+ + + E
Sbjct: 715 DARMIQSLVASCNKQRKTE 733
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/354 (19%), Positives = 153/354 (43%), Gaps = 70/354 (19%)
Query: 49 SSLIDGFFKARRYNEAHSLYGRMIKGGILPD--VILYAIMLRGLSNEGRVGEAVKMFAEM 106
SSL D + K ++A ++ +PD + + ++ G G+ EA+++F++M
Sbjct: 212 SSLADMYGKCGVLDDASKVFDE------IPDRNAVAWNALMVGYVQNGKNEEAIRLFSDM 265
Query: 107 IQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLH-DTCTHTILICEMCKKGM 165
++G+ P + + ++G ++ + H I+ +G+ D T L+ CK G+
Sbjct: 266 RKQGVEPTRVTVSTCLSASANMGGVEEGKQSHA-IAIVNGMELDNILGTSLLNFYCKVGL 324
Query: 166 VREAQEMFNQM-EKLGCFPSAVTFNALINGLCKAGKLDEAHLL--FYKMEIGKSPSLFFR 222
+ A+ +F++M EK VT+N +I+G + G +++A + ++E K +
Sbjct: 325 IEYAEMVFDRMFEK-----DVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLA 379
Query: 223 LAQGSDHVSDSVSLQKKVEHMC-------------------------------------- 244
+ ++++ L K+V+ C
Sbjct: 380 TLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEK 439
Query: 245 -------------EAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLF 291
E+G + A +L + GV P++ T+N++I S + G ++ A +F
Sbjct: 440 DLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMF 499
Query: 292 KDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEP-SFAVYKAL 344
+Q G+ P+ +++ T+++G+ + E+A M + P +F++ AL
Sbjct: 500 LQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVAL 553
>AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=978
Length = 978
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 154/360 (42%), Gaps = 39/360 (10%)
Query: 2 WMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRY 61
W R + D+ +N +LN ++ + E A +L+ L++ G+ Y +++ +Y
Sbjct: 585 WDPRLEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKY 644
Query: 62 NEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAI 121
N H + +M K I P+ + Y +++ L EG+ EAV +M RG++ A Y +
Sbjct: 645 NLVHEFFRKMQKSSI-PNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDL 703
Query: 122 IKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGC 181
+ C G+ + ++ +I T+T LI G ++ A +F+QM+K+ C
Sbjct: 704 ARCLCSAGRCNEGLNMLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQMKKV-C 762
Query: 182 FPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVE 241
P+ VT N ++ + G +EA LF KM ++ +H+ +S +
Sbjct: 763 SPNLVTCNIMLKAYLQGGLFEEARELFQKM------------SEDGNHIKNSSDFE---- 806
Query: 242 HMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSP 301
S V+PD T+N ++++ + + ++++ G
Sbjct: 807 --------------------SRVLPDTYTFNTMLDTCAEQEKWDDFGYAYREMLRHGYHF 846
Query: 302 DSVTYGTLIDGLYRVEREEDAFKIRDHMLK-HVCEPSFAVYKALMTWLCRGKKISLAFSL 360
++ + ++ R +EE +HM + + PS + + L +G IS SL
Sbjct: 847 NAKRHLRMVLEASRAGKEEVMEATWEHMRRSNRIPPSPLIKERFFRKLEKGDHISAISSL 906
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 106/485 (21%), Positives = 204/485 (42%), Gaps = 70/485 (14%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLL-RLLERDGRGIRLSGYSSLIDGFFKARRYNEA 64
F D+ N ++ + K +E A + + ERD + ++S+I G+ ++ + +
Sbjct: 163 FDSDVFVGNGMITYYTKCDNIESARKVFDEMSERD-----VVSWNSMISGYSQSGSFEDC 217
Query: 65 HSLYGRMIK-GGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIK 123
+Y M+ P+ + + + + +++ +MI+ + D NA+I
Sbjct: 218 KKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIG 277
Query: 124 GFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFP 183
+ G LD+AR+L E+S D+ T+ +I G+V+EA +F++ME +G
Sbjct: 278 FYAKCGSLDYARALFDEMSE----KDSVTYGAIISGYMAHGLVKEAMALFSEMESIGL-- 331
Query: 184 SAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLF---------------------- 220
T+NA+I+GL + +E F +M G P+
Sbjct: 332 --STWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIH 389
Query: 221 -FRLAQGSD---HVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILIN 276
F + G+D +V+ S+ +++ + G L A ++ D ++ + +I
Sbjct: 390 AFAIRNGADNNIYVTTSI-----IDNYAKLGFLLGAQRVFDNCKDRSLI----AWTAIIT 440
Query: 277 SFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHML-KHVCE 335
++ G+ + A LF +Q G PD VT ++ + A I D ML K+ E
Sbjct: 441 AYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIE 500
Query: 336 PSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGL 395
P Y +++ L R K+S A +E++ +P D I + + G ++ G
Sbjct: 501 PGVEHYACMVSVLSRAGKLSDA----MEFISKMP---IDPIAKVWGALLNGA---SVLGD 550
Query: 396 LELD-------FRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININP-TSCVH 447
LE+ F N Y+I+ + QA + +EA ++ + + + P TS +
Sbjct: 551 LEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIE 610
Query: 448 LISGL 452
GL
Sbjct: 611 TEKGL 615
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 105/523 (20%), Positives = 216/523 (41%), Gaps = 87/523 (16%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
+ +++ N L+ + + GKLE L R + + LS ++S++ + K ++A
Sbjct: 120 LESNVSMCNSLIVMYSRNGKLE----LSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAI 175
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
L M G+ PD++ + +L G +++G +A+ + M GL P +++++
Sbjct: 176 GLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAV 235
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
+ G L +++H I + +D T LI K G + A+ +F+ M+ +
Sbjct: 236 AEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDA----KNI 291
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCE 245
V +N+L++GL A L +A
Sbjct: 292 VAWNSLVSGLSYACLLKDAE---------------------------------------- 311
Query: 246 AGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVT 305
L+ ++ G+ PD T+N L + + G A + ++ KG++P+ V+
Sbjct: 312 --------ALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVS 363
Query: 306 YGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKAL------MTWLCRGKKISLAFS 359
+ + G + +A K+ M + P+ A L ++ L GK++ F
Sbjct: 364 WTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVH-GFC 422
Query: 360 LYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQ 419
L K+L + ++ Y G+++ AI E+ + ++ +LA ++ +L+G+
Sbjct: 423 LR----KNLICDAYVATALVDMYGKSGDLQSAI----EIFWGIKNKSLASWNCMLMGYAM 474
Query: 420 AKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKI 479
+ +E + FSV+ E + + + ++S +C L + + + + P I
Sbjct: 475 FGRGEEGIAAFSVMLEAGMEPDAITFTSVLS-VCKNSGLVQEGWKYFDLMRSRYGIIPTI 533
Query: 480 CKELLECLLVSQDKRKYAIDLIGRMKSRGYRLHKYQYRQTISL 522
E C+ +DL+GR GY + + QT+SL
Sbjct: 534 --EHCSCM----------VDLLGR---SGYLDEAWDFIQTMSL 561
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/365 (20%), Positives = 149/365 (40%), Gaps = 64/365 (17%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D+ L++ + K G L A + ++ D + I ++SL+ G A +A +L
Sbjct: 259 DVYVETTLIDMYIKTGYLPYARMVFDMM--DAKNI--VAWNSLVSGLSYACLLKDAEALM 314
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
RM K GI PD I + + G + G+ +A+ + +M ++G+ P+ + AI G
Sbjct: 315 IRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKN 374
Query: 129 GQLDHARSLHVEISG-----------------------HDG--LHDTCTHTILICEM--- 160
G +A + +++ H G +H C LIC+
Sbjct: 375 GNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVA 434
Query: 161 -------CKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM-E 212
K G ++ A E+F ++ S ++N ++ G G+ +E F M E
Sbjct: 435 TALVDMYGKSGDLQSAIEIFWGIKN----KSLASWNCMLMGYAMFGRGEEGIAAFSVMLE 490
Query: 213 IGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQL-ADSGVVPDIKTY 271
G P D+++ + +G +K + + G++P I+
Sbjct: 491 AGMEP--------------DAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHC 536
Query: 272 NILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLK 331
+ +++ ++G ++ A+ + + LK PD+ +G + ++ R+ + +I L+
Sbjct: 537 SCMVDLLGRSGYLDEAWDFIQTMSLK---PDATIWGAFLSSC-KIHRDLELAEIAWKRLQ 592
Query: 332 HVCEP 336
V EP
Sbjct: 593 -VLEP 596
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 158/404 (39%), Gaps = 70/404 (17%)
Query: 96 VGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSL--HVEISGHDGLHDTCTH 153
+G A K+F EM +R D +N I+ G + A L ++ SG T
Sbjct: 39 LGFANKLFDEMPKR----DDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVK 94
Query: 154 TILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEI 213
+ +C K+G E +++ + +LG + N+LI + GKL+ + +F M
Sbjct: 95 LLQVCSN-KEGFA-EGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSM-- 150
Query: 214 GKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNI 273
K +L S + + G +A LL ++ G+ PDI T+N
Sbjct: 151 -KDRNL--------------SSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNS 195
Query: 274 LINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHV 333
L++ + G A + K +Q+ GL P + + +L L+ V
Sbjct: 196 LLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSL--------------------LQAV 235
Query: 334 CEPS-FAVYKALMTWLCRGKKISLAFSLYLE------YLKS--LP-------GRDNDSIN 377
EP + KA+ ++ R + L + +Y+E Y+K+ LP D +I
Sbjct: 236 AEPGHLKLGKAIHGYILRNQ---LWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIV 292
Query: 378 ALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSI----LLIGFCQAKKVDEALIIFSVL 433
A ++ L R + P +I L G+ K ++AL + +
Sbjct: 293 AWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKM 352
Query: 434 DEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGP 477
E + N S + SG N +A+ +F+ ++G +GP
Sbjct: 353 KEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEG--VGP 394
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 125/577 (21%), Positives = 238/577 (41%), Gaps = 125/577 (21%)
Query: 13 FNVLLNGFCKQGKLEEAVSLLRLL-ERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRM 71
+ LL+ + K G L+EA L ++ ER+ + ++++ G+ K RR NEA +L+ M
Sbjct: 80 WTSLLSKYAKTGYLDEARVLFEVMPERN-----IVTCNAMLTGYVKCRRMNEAWTLFREM 134
Query: 72 IKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLP------------------ 113
K +V+ + +ML L ++GR +AV++F EM +R ++
Sbjct: 135 PK-----NVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAK 189
Query: 114 ---------DAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKG 164
D +NA+IKG+ + ++ A+ L ++S + T T ++ C+ G
Sbjct: 190 QVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSE----KNVVTWTSMVYGYCRYG 245
Query: 165 MVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEI---GKSPS--- 218
VREA +F +M + + V++ A+I+G EA +LF +M+ SP+
Sbjct: 246 DVREAYRLFCEMPE----RNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGET 301
Query: 219 ------------LFFR----------LAQGSDHVSDSVSLQKKVEHM-CEAGQTLNAYKL 255
+ FR ++ G + V L K + HM +G +A L
Sbjct: 302 LISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSL 361
Query: 256 LTQLAD--------------------------SGVVPDIKTYNILINSFCKAGNMNGAFK 289
L + D + D ++ +I+ + +AG+++ AF
Sbjct: 362 LNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFG 421
Query: 290 LFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLC 349
LF+ L K D VT+ +I GL + E +A + M++ +P + Y L++
Sbjct: 422 LFQKLHDK----DGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAG 477
Query: 350 RGKKISLAFSLYLEYLKSLPGRDNDSI--NALEEYFMK-GEVERAIRGLLELDFRFRDFN 406
+ ++ K+ D D I N+L + K G +E A E+ + +
Sbjct: 478 ATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDA----YEIFAKMVQKD 533
Query: 407 LAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFL 466
++ +++G D+AL +F + + N + + ++S C+ L +
Sbjct: 534 TVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSA-CSHSGLITRGLELF 592
Query: 467 YSLDKGFELGPKICKELLECLLVSQDKRKYAIDLIGR 503
++ + + + P I D IDL+GR
Sbjct: 593 KAMKETYSIQPGI------------DHYISMIDLLGR 617
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 141/323 (43%), Gaps = 32/323 (9%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
DL + N+++N + K G LE A +L ++ + ++S+IDG+ +A + A L+
Sbjct: 367 DLQSCNIIINRYLKNGDLERAETLFERVKSLHDKV---SWTSMIDGYLEAGDVSRAFGLF 423
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
++ D + + +M+ GL EA + ++M++ GL P Y+ ++
Sbjct: 424 QKLHD----KDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGAT 479
Query: 129 GQLDHARSLHVEISGHDGLHDT--CTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAV 186
LD + +H I+ +D L+ K G + +A E+F +M + V
Sbjct: 480 SNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQ----KDTV 535
Query: 187 TFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCE 245
++N++I GL G D+A LF +M + GK P +SV+ +
Sbjct: 536 SWNSMIMGLSHHGLADKALNLFKEMLDSGKKP--------------NSVTFLGVLSACSH 581
Query: 246 AGQTLNAYKLLTQLADS-GVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSV 304
+G +L + ++ + P I Y +I+ +AG + A + L +PD
Sbjct: 582 SGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALP---FTPDHT 638
Query: 305 TYGTLIDGLYRVEREEDAFKIRD 327
YG L+ R++DA I +
Sbjct: 639 VYGALLGLCGLNWRDKDAEGIAE 661
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 130/316 (41%), Gaps = 51/316 (16%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
RD+ ++N ++ G+ + +EEA +LL D + ++S++ G+ + EA+
Sbjct: 197 SRDVVSWNAMIKGYIENDGMEEA----KLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYR 252
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQ---------RGLLPDAHC 117
L+ M + +++ + M+ G + EA+ +F EM + L+ A+
Sbjct: 253 LFCEMPE----RNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYA 308
Query: 118 YNAIIKGFCDIGQLDHARSLH--VEISGHDG-LHDTCTHTILICEMCKKGMVREAQEMFN 174
+ F +G+ HA+ + E HDG L + H G++ AQ + N
Sbjct: 309 CGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMY-----ASSGLIASAQSLLN 363
Query: 175 QMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSV 234
+ L + N +IN K G L+ A LF +++ + D V
Sbjct: 364 ESFDLQ------SCNIIINRYLKNGDLERAETLFERVK----------------SLHDKV 401
Query: 235 SLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDL 294
S ++ EAG A+ L +L D D T+ ++I+ + A L D+
Sbjct: 402 SWTSMIDGYLEAGDVSRAFGLFQKLHDK----DGVTWTVMISGLVQNELFAEAASLLSDM 457
Query: 295 QLKGLSPDSVTYGTLI 310
GL P + TY L+
Sbjct: 458 VRCGLKPLNSTYSVLL 473
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 123/303 (40%), Gaps = 43/303 (14%)
Query: 112 LPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQE 171
L D + ++I G+ + G + A L ++ DG+ T T++I + + + EA
Sbjct: 397 LHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGV----TWTVMISGLVQNELFAEAAS 452
Query: 172 MFNQMEKLGCFPSAVTFNALINGLCKAGKLDEA---HLLFYKMEIGKSPSLFFRLAQGSD 228
+ + M + G P T++ L++ LD+ H + K P L +
Sbjct: 453 LLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQ------ 506
Query: 229 HVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAF 288
+ VS+ K G +AY++ ++ V D ++N +I G + A
Sbjct: 507 --NSLVSMYAK------CGAIEDAYEIFAKM----VQKDTVSWNSMIMGLSHHGLADKAL 554
Query: 289 KLFKDLQLKGLSPDSVTYGTLIDGLYR---VEREEDAFKIRDHMLKHVCEPSFAVYKALM 345
LFK++ G P+SVT+ ++ + R + FK + +P Y +++
Sbjct: 555 NLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKE--TYSIQPGIDHYISMI 612
Query: 346 TWLCRGKKISLAFSLYLEYLKSLPGRDNDSINA---------LEEYFMKGEVERAIRGLL 396
L R K+ A E++ +LP + ++ + +G ERA LL
Sbjct: 613 DLLGRAGKLKEAE----EFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLL 668
Query: 397 ELD 399
ELD
Sbjct: 669 ELD 671
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 151/374 (40%), Gaps = 60/374 (16%)
Query: 79 DVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLH 138
+VILY + ++ + ++ K+F EM++RG+ PD + II
Sbjct: 174 EVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTII---------------- 217
Query: 139 VEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKA 198
+C + G+ + A E F +M GC P VT A+I+ +A
Sbjct: 218 -----------SCAR--------QNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRA 258
Query: 199 GKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQ 258
G +D A L+ + K +R+ D+V+ + +G + +
Sbjct: 259 GNVDMALSLYDRARTEK-----WRI--------DAVTFSTLIRIYGVSGNYDGCLNIYEE 305
Query: 259 LADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVER 318
+ GV P++ YN LI+S +A A ++KDL G +P+ TY L+ R
Sbjct: 306 MKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARY 365
Query: 319 EEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSI-- 376
+DA I M + + +Y L++ + + AF ++ + +K+ D DS
Sbjct: 366 GDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQD-MKNCETCDPDSWTF 424
Query: 377 -NALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQ----AKKVDEALIIFS 431
+ + Y G V A LL++ R+ P +L Q AK+VD+ + F
Sbjct: 425 SSLITVYACSGRVSEAEAALLQM----REAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFD 480
Query: 432 VLDEFNININPTSC 445
+ E I + C
Sbjct: 481 QVLELGITPDDRFC 494
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 121/307 (39%), Gaps = 50/307 (16%)
Query: 48 YSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMI 107
Y+ + F K++ ++ L+ M++ GI PD + ++ G AV+ F +M
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMS 237
Query: 108 QRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVR 167
G PD A+I + G +D A SL+ D T + LI G
Sbjct: 238 SFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYD 297
Query: 168 EAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGS 227
++ +M+ LG P+ V +N LI+ + +A + +A +++
Sbjct: 298 GCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIY------------------- 338
Query: 228 DHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGA 287
L +G P+ TY L+ ++ +A + A
Sbjct: 339 -----------------------------KDLITNGFTPNWSTYAALVRAYGRARYGDDA 369
Query: 288 FKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLK-HVCEPSFAVYKALMT 346
++++++ KGLS + Y TL+ ++AF+I M C+P + +L+T
Sbjct: 370 LAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLIT 429
Query: 347 -WLCRGK 352
+ C G+
Sbjct: 430 VYACSGR 436
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 99/215 (46%), Gaps = 2/215 (0%)
Query: 5 RFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEA 64
+++ D TF+ L+ + G + +++ ++ G L Y+ LID +A+R +A
Sbjct: 275 KWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQA 334
Query: 65 HSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKG 124
+Y +I G P+ YA ++R +A+ ++ EM ++GL YN ++
Sbjct: 335 KIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSM 394
Query: 125 FCDIGQLDHARSLHVEISGHDGLH-DTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFP 183
D +D A + ++ + D+ T + LI G V EA+ QM + G P
Sbjct: 395 CADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEP 454
Query: 184 SAVTFNALINGLCKAGKLDEAHLLFYK-MEIGKSP 217
+ ++I KA ++D+ F + +E+G +P
Sbjct: 455 TLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITP 489
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 1/206 (0%)
Query: 271 YNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHML 330
YN+ + F K+ ++ + KLF ++ +G+ PD+ T+ T+I + + A + + M
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMS 237
Query: 331 KHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINAL-EEYFMKGEVE 389
CEP A++ R + +A SLY D + + L Y + G +
Sbjct: 238 SFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYD 297
Query: 390 RAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLI 449
+ E+ NL Y+ L+ +AK+ +A II+ L N ++ L+
Sbjct: 298 GCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALV 357
Query: 450 SGLCAKRNLYDAVVIFLYSLDKGFEL 475
R DA+ I+ +KG L
Sbjct: 358 RAYGRARYGDDALAIYREMKEKGLSL 383
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 145/316 (45%), Gaps = 35/316 (11%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
+++ ++N +++G+ + G LE+A ++ G + ++++I G+ KA++ A +
Sbjct: 183 EKNEVSWNAMISGYIECGDLEKASHFFKVAPVRG----VVAWTAMITGYMKAKKVELAEA 238
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
++ M + +++ + M+ G R + +K+F M++ G+ P++ ++ + G
Sbjct: 239 MFKDMT---VNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCS 295
Query: 127 DIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAV 186
++ L R +H +S +D T LI CK G + +A ++F M+K V
Sbjct: 296 ELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKK----KDVV 351
Query: 187 TFNALINGLCKAGKLDEAHLLFYKMEIGK-SPSLFFRLAQGSDHVSDSVSLQKKVEHMCE 245
+NA+I+G + G D+A LF +M K P +A V C
Sbjct: 352 AWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVA---------------VLLACN 396
Query: 246 AGQTLN---AYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPD 302
+N AY + + D V P Y +++ +AG + A KL + + + P
Sbjct: 397 HAGLVNIGMAY-FESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFR---PH 452
Query: 303 SVTYGTLIDGLYRVER 318
+ +GTL+ G RV +
Sbjct: 453 AAVFGTLL-GACRVHK 467
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 87/398 (21%), Positives = 169/398 (42%), Gaps = 61/398 (15%)
Query: 8 RDLATFNVLLNGFCKQ-GKLEEAVSLL-RLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
++ T+N LL G K ++ EA L + E D Y+ ++ + + + +A
Sbjct: 90 KNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPD-----TFSYNIMLSCYVRNVNFEKAQ 144
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
S + RM D + M+ G + G + +A ++F M+++ + +NA+I G+
Sbjct: 145 SFFDRMP----FKDAASWNTMITGYARRGEMEKARELFYSMMEKNEV----SWNAMISGY 196
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
+ G L+ A S +++ G+ T +I K V A+ MF M +
Sbjct: 197 IECGDLEKA-SHFFKVAPVRGV---VAWTAMITGYMKAKKVELAEAMFKDMT---VNKNL 249
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPS---------------------LFFRL 223
VT+NA+I+G + + ++ LF M E G P+ ++
Sbjct: 250 VTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQI 309
Query: 224 AQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGN 283
S +D +L + C+ G+ +A+KL + VV +N +I+ + + GN
Sbjct: 310 VSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVV----AWNAMISGYAQHGN 365
Query: 284 MNGAFKLFKDLQLKGLSPDSVTYGTLI-----DGLYRVEREEDAFKIRDHMLKHVCEPSF 338
+ A LF+++ + PD +T+ ++ GL + +RD+ + EP
Sbjct: 366 ADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKV----EPQP 421
Query: 339 AVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSI 376
Y ++ L R K+ A L ++S+P R + ++
Sbjct: 422 DHYTCMVDLLGRAGKLEEALKL----IRSMPFRPHAAV 455
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/412 (20%), Positives = 167/412 (40%), Gaps = 55/412 (13%)
Query: 94 GRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC-DIGQLDHARSLHVEISGHDGLHDTCT 152
G + A+++F M + + +N+++ G D ++ A L EI D T +
Sbjct: 75 GDIDGALRVFHGMRAKNTI----TWNSLLIGISKDPSRMMEAHQLFDEIPEPD----TFS 126
Query: 153 HTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKME 212
+ I++ + +AQ F++M F A ++N +I G + G++++A LFY M
Sbjct: 127 YNIMLSCYVRNVNFEKAQSFFDRMP----FKDAASWNTMITGYARRGEMEKARELFYSM- 181
Query: 213 IGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYN 272
+ VS + E G A GVV +
Sbjct: 182 ----------------MEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVV----AWT 221
Query: 273 ILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKH 332
+I + KA + A +FKD+ + + + VT+ +I G R ED K+ ML+
Sbjct: 222 AMITGYMKAKKVELAEAMFKDMTV---NKNLVTWNAMISGYVENSRPEDGLKLFRAMLEE 278
Query: 333 VCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMK-GEVERA 391
P+ + + + + L ++ KS D ++ +L + K GE+ A
Sbjct: 279 GIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDA 338
Query: 392 IRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISG 451
+ L E+ + ++ ++ ++ G+ Q D+AL +F + + I + + V ++
Sbjct: 339 WK-LFEV---MKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLA 394
Query: 452 LCAKRNLYDAVVIFLYSLDKGFELGPKICKELLECLLVSQDKRKYAIDLIGR 503
C L + + + S+ + +++ P+ D +DL+GR
Sbjct: 395 -CNHAGLVNIGMAYFESMVRDYKVEPQ------------PDHYTCMVDLLGR 433
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 107/525 (20%), Positives = 220/525 (41%), Gaps = 80/525 (15%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSL-LRLLERD-------------------------- 39
+R+L ++ ++ G+ + G+ EA+ L L++L+ D
Sbjct: 130 ERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQ 189
Query: 40 --GRGIRLSGYSSLIDG---FFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEG 94
+ I+L S LI R+N+ S R+ G + D+I ++ ++ G S G
Sbjct: 190 LHAQVIKLESSSHLIAQNALIAMYVRFNQM-SDASRVFYGIPMKDLISWSSIIAGFSQLG 248
Query: 95 RVGEAVKMFAEMIQRGLL-PDAHCYNAIIKGFCDIGQLDHARSLH-----VEISGHDGLH 148
EA+ EM+ G+ P+ + + + +K + + D+ +H E++G+
Sbjct: 249 FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGN---- 304
Query: 149 DTCTHTILICEMC----KKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEA 204
I C +C + G + A+ +F+Q+E+ P ++N +I GL G DEA
Sbjct: 305 -----AIAGCSLCDMYARCGFLNSARRVFDQIER----PDTASWNVIIAGLANNGYADEA 355
Query: 205 HLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGV 264
+F +M + S + D++SL+ + + ++ + + G
Sbjct: 356 VSVFSQM-------------RSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGF 402
Query: 265 VPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFK 324
+ D+ N L+ + ++ F LF+D + DSV++ T++ + E+ + +
Sbjct: 403 LADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNA---DSVSWNTILTACLQHEQPVEMLR 459
Query: 325 IRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFM 384
+ ML CEP L+ + L ++ LK+ + N L + +
Sbjct: 460 LFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYA 519
Query: 385 K-GEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPT 443
K G + +A R +D R ++ +S L++G+ Q+ +EALI+F + I N
Sbjct: 520 KCGSLGQARRIFDSMDNR----DVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHV 575
Query: 444 SCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKELLECLL 488
+ V +++ C+ L + + ++ + P KE C++
Sbjct: 576 TFVGVLTA-CSHVGLVEEGLKLYATMQTEHGISPT--KEHCSCVV 617
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/338 (20%), Positives = 132/338 (39%), Gaps = 48/338 (14%)
Query: 50 SLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQR 109
SL D + + N A ++ ++ + PD + +++ GL+N G EAV +F++M
Sbjct: 310 SLCDMYARCGFLNSARRVFDQIER----PDTASWNVIIAGLANNGYADEAVSVFSQMRSS 365
Query: 110 GLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHD--TCTHTILICEMCKKGMVR 167
G +PDA +++ L +H I L D C + + C
Sbjct: 366 GFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCS----- 420
Query: 168 EAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGS 227
+ FN E +V++N ++ + + E LF M + +
Sbjct: 421 DLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEP--------- 471
Query: 228 DHVSDSVSLQKKVE-HMCEAGQTLNAYKLLTQLA-------------------------- 260
DH++ L+ VE + G ++ Y L T LA
Sbjct: 472 DHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIF 531
Query: 261 DSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREE 320
DS D+ +++ LI + ++G A LFK+++ G+ P+ VT+ ++ V E
Sbjct: 532 DSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVE 591
Query: 321 DAFKIRDHM-LKHVCEPSFAVYKALMTWLCRGKKISLA 357
+ K+ M +H P+ ++ L R +++ A
Sbjct: 592 EGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEA 629
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 124/286 (43%), Gaps = 15/286 (5%)
Query: 11 ATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYN--EAHSLY 68
+TF +L++ C+ G+++ A L+R + +D + YS L+ K + + +
Sbjct: 180 STFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYL 239
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
+ K P + Y +++R L GR E V + +M + PD CY +++G
Sbjct: 240 EDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIAD 299
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
A L E+ D T+ + I +CK+ + A +M + M KLG P+ VT+
Sbjct: 300 EDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTY 359
Query: 189 NALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQ 248
N LI L KAG L A L+ +ME G + S + + + E +
Sbjct: 360 NILIKALVKAGDLSRAKTLWKEME-----------TNGVNRNSHTFDIM--ISAYIEVDE 406
Query: 249 TLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDL 294
+ A+ LL + + V +I+ C+ G M+ A +L L
Sbjct: 407 VVCAHGLLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVELLAHL 452
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 14/207 (6%)
Query: 5 RFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEA 64
RF L + V++ + G+ +E VS+L ++ D L Y+ ++ G Y +A
Sbjct: 246 RFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKA 305
Query: 65 HSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKG 124
L+ ++ G+ PDV Y + + GL + + A+KM + M + G P+ YN +IK
Sbjct: 306 DKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKA 365
Query: 125 FCDIGQLDHARSLHVEISGHDGLHDTCTHTILICE-------MCKKGMVREAQEMFNQME 177
G L A++L E+ + ++ T I+I +C G++ EA FN
Sbjct: 366 LVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEA---FN--- 419
Query: 178 KLGCFPSAVTFNALINGLCKAGKLDEA 204
+ F + +I+ LC+ G +D+A
Sbjct: 420 -MNVFVKSSRIEEVISRLCEKGLMDQA 445
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 135/355 (38%), Gaps = 63/355 (17%)
Query: 113 PDAHCYNAIIKGFCDIGQLDHARSL--HVEISGHDGLHDTCTHTILICEMCKKGMVREAQ 170
P Y +IK QL++ S+ H+E+S ++ + I G + EA
Sbjct: 70 PTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDV-IAAYGFSGRIEEAI 128
Query: 171 EMFNQMEKLGCFPSAVTFNAL------------------------------------ING 194
E+F ++ C PSA T NAL I+
Sbjct: 129 EVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDA 188
Query: 195 LCKAGKLDEAHLLFYKME---IGKSPSLFFRLAQGSDHVSDSV---------SLQKK--- 239
LC+ G++D A L M + P L+ RL DS L+K
Sbjct: 189 LCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFS 248
Query: 240 ---------VEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKL 290
+ + E G+ +L Q+ V PD+ Y I++ + A KL
Sbjct: 249 PGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKL 308
Query: 291 FKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCR 350
F +L L GL+PD TY I+GL + E A K+ M K EP+ Y L+ L +
Sbjct: 309 FDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVK 368
Query: 351 GKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDF 405
+S A +L+ E + R++ + + + +++ + GLLE F F
Sbjct: 369 AGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVF 423
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 138/331 (41%), Gaps = 30/331 (9%)
Query: 2 WM---RRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKA 58
WM R + D ++ L++ K+G+ A+ L ++ G S Y++LI
Sbjct: 122 WMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHT 181
Query: 59 RRYNEA-HSLYGRMIK-GGI---LPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLP 113
R +A + G + K GI P+V+ Y I+LR + G+V + +F ++ + P
Sbjct: 182 RDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSP 241
Query: 114 DAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMF 173
D + +N ++ + G + ++ + ++ D T +LI KK + ++ F
Sbjct: 242 DVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTF 301
Query: 174 NQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSL------------- 219
+ + P+ TFN++I KA +D+A +F KM ++ PS
Sbjct: 302 KSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC 361
Query: 220 --------FFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTY 271
F SD V + +L +E C G + A KL + V PD TY
Sbjct: 362 GSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTY 421
Query: 272 NILINSFCKAGNMNGAFKLFKDLQLKGLSPD 302
L ++ KA L K ++ G+ P+
Sbjct: 422 KFLYKAYTKADMKEQVQILMKKMEKDGIVPN 452
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 141/312 (45%), Gaps = 53/312 (16%)
Query: 77 LPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARS 136
+PD +Y+ ++ + +G+ A+ +F+EM G PDA YNA+I + D A++
Sbjct: 130 IPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAH--LHTRDKAKA 187
Query: 137 LHVEISGH-DGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGL 195
L ++ G+ D + KG+ R C P+ VT+N L+
Sbjct: 188 LE-KVRGYLDKM---------------KGIER-------------CQPNVVTYNILLRAF 218
Query: 196 CKAGKLDEAHLLFYKMEIGK-SPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYK 254
++GK+D+ + LF +++ SP ++ + V D+ ++ M EA
Sbjct: 219 AQSGKVDQVNALFKDLDMSPVSPDVY-----TFNGVMDAYGKNGMIKEM-EA-------- 264
Query: 255 LLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLY 314
+LT++ + PDI T+N+LI+S+ K + FK L P T+ ++I
Sbjct: 265 VLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYG 324
Query: 315 R---VEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGR 371
+ +++ E FK + M ++ PSF Y+ ++ +S A ++ E +S
Sbjct: 325 KARMIDKAEWVFKKMNDM-NYI--PSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVL 381
Query: 372 DNDSINALEEYF 383
++NA+ E +
Sbjct: 382 KASTLNAMLEVY 393
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 117/310 (37%), Gaps = 79/310 (25%)
Query: 147 LHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHL 206
+ D ++ LI M KKG R A +F++M+ GC P A +NALI AHL
Sbjct: 130 IPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALIT----------AHL 179
Query: 207 LFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVP 266
H D +KV + + + + P
Sbjct: 180 ----------------------HTRDKAKALEKVRGYLDKMKGIERCQ-----------P 206
Query: 267 DIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIR 326
++ TYNIL+ +F ++G ++ LFKDL + +SPD T+ ++D + ++ +
Sbjct: 207 NVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVL 266
Query: 327 DHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKG 386
M + C+P + L ++ Y K
Sbjct: 267 TRMRSNECKPDIITFNVL----------------------------------IDSYGKKQ 292
Query: 387 EVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNI--NINPTS 444
E E+ + L L ++ ++I + +A+ +D+A +F +++ N +
Sbjct: 293 EFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYE 352
Query: 445 CVHLISGLCA 454
C+ ++ G C
Sbjct: 353 CMIMMYGYCG 362
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 134/272 (49%), Gaps = 18/272 (6%)
Query: 57 KARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAH 116
+A +EA + + + + D + Y +++R +++G + A + EM GL PD
Sbjct: 142 QANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVI 201
Query: 117 CYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQM 176
Y ++I G+C+ G++D A L E+S HD + ++ T++ ++ +CK G + A E+ +M
Sbjct: 202 TYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEM 261
Query: 177 EKLG----CFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVS 231
EK P+AVT+ +I C+ +++EA L+ +M G P + V+
Sbjct: 262 EKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMP----------NRVT 311
Query: 232 DSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLF 291
V +Q +E+ E + L+ KL+ +L G V + ++ S + A K+F
Sbjct: 312 ACVLIQGVLEND-EDVKALS--KLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIF 368
Query: 292 KDLQLKGLSPDSVTYGTLIDGLYRVEREEDAF 323
+ + ++G+ PD + + L +ER D F
Sbjct: 369 RLMLVRGVRPDGLACSHVFRELCLLERYLDCF 400
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 132/316 (41%), Gaps = 31/316 (9%)
Query: 9 DLATFNVLLNGFCKQGKL-EEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSL 67
++ T ++L C Q L +EA+ +LR Y+ +I F N A L
Sbjct: 129 NVKTMRIVLT-LCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADML 187
Query: 68 YGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCD 127
M G+ PDVI Y M+ G N G++ +A ++ EM + + ++ Y+ I++G C
Sbjct: 188 IKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCK 247
Query: 128 IGQLDHARSLHVEISGHDG----LHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFP 183
G ++ A L E+ DG + T+T++I C+K V EA + ++M GC P
Sbjct: 248 SGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMP 307
Query: 184 SAVTFNALING-----------------LCKAGKL------DEAHLLFYKMEIGKSPSLF 220
+ VT LI G L K G + A + +M+ +
Sbjct: 308 NRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKI 367
Query: 221 FRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKT--YNILINSF 278
FRL D ++ +C + L+ + L ++ V I + + +L+
Sbjct: 368 FRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGL 427
Query: 279 CKAGNMNGAFKLFKDL 294
C+ GN A KL K +
Sbjct: 428 CQQGNSWEAAKLAKSM 443
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 130/308 (42%), Gaps = 29/308 (9%)
Query: 78 PDVILYAI----------------MLRGLSNEGRVG-EAVKMFAEMIQRGLLPDAHCYNA 120
PD+I Y I ++ L N+ + EA+ + + + + D YN
Sbjct: 111 PDLIKYVIESYRKEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNL 170
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I+ F D G L+ A L E+ D T+T +I C G + +A + +M K
Sbjct: 171 VIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHD 230
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKV 240
C ++VT++ ++ G+CK+G ++ A L +ME L ++V+ +
Sbjct: 231 CVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLI---------SPNAVTYTLVI 281
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKD--LQLKG 298
+ CE + A +L ++ + G +P+ T +LI + A D ++L G
Sbjct: 282 QAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGG 341
Query: 299 LSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAF 358
+S S + + L R++R E+A KI ML P + LC ++ F
Sbjct: 342 VSL-SECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCF 400
Query: 359 SLYLEYLK 366
LY E K
Sbjct: 401 LLYQEIEK 408
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 74/366 (20%), Positives = 152/366 (41%), Gaps = 45/366 (12%)
Query: 156 LICEMCKKG-MVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKME-I 213
++ +C + + EA + + + V +N +I G L+ A +L +M+ +
Sbjct: 135 IVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCV 194
Query: 214 GKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNI 273
G P D ++ + C AG+ +A++L +++ V + TY+
Sbjct: 195 GLYP--------------DVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSR 240
Query: 274 LINSFCKAGNMNGAFKLFKDLQLKG----LSPDSVTYGTLIDGLYRVEREEDAFKIRDHM 329
++ CK+G+M A +L +++ + +SP++VTY +I R E+A + D M
Sbjct: 241 ILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRM 300
Query: 330 LKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKG--- 386
C P+ L+ + + A S ++ L L G +L E F
Sbjct: 301 GNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGV------SLSECFSSATVS 354
Query: 387 --------EVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNI 438
E E+ R +L R S + C ++ + +++ +++ ++
Sbjct: 355 LIRMKRWEEAEKIFRLMLVRGVRPDGL---ACSHVFRELCLLERYLDCFLLYQEIEKKDV 411
Query: 439 NINPTSCVH--LISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKELLECLLVSQDK--- 493
S +H L+ GLC + N ++A + LDK L ++++E L + D+
Sbjct: 412 KSTIDSDIHAVLLLGLCQQGNSWEAAKLAKSMLDKKMRLKVSHVEKIIEALKKTGDEDLM 471
Query: 494 RKYAID 499
+++ID
Sbjct: 472 SRFSID 477
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 142/347 (40%), Gaps = 36/347 (10%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
+Q T+N L + + E S++ ++ G + L Y + F K+R E
Sbjct: 259 YQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETV 318
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEG--------RVGEAVKMFAEMIQRGLLPDAHC 117
LY M+ G P + +++LR LS RV + + + + +
Sbjct: 319 KLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAV------ 372
Query: 118 YNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQME 177
Y+ I + +G+ D A + + D T++ L+ +CK + EA+ + +QME
Sbjct: 373 YDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQME 432
Query: 178 KLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSD--SVS 235
GCFP T+ LI G CK +LD+A F M L +G D S+ V
Sbjct: 433 AQGCFPDIKTWTILIQGHCKNNELDKALACFANM-----------LEKGFDIDSNLLDVL 481
Query: 236 LQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQ 295
+ V H G ++ L+ + ++ V P TY +LI+ K A L + ++
Sbjct: 482 IDGFVIHNKFEGASIF---LMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMK 538
Query: 296 LKGLSPDSVTYGTLIDG-LYRVEREEDAFKIRDHMLKHVCEPSFAVY 341
+ Y DG L + EDA K D +L PSFA Y
Sbjct: 539 KQNYP----AYAEAFDGYLAKFGTLEDAKKFLD-VLSSKDSPSFAAY 580
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 81/185 (43%), Gaps = 14/185 (7%)
Query: 177 EKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSL 236
E G S ++ + L G+ DEA EI K+ + + + D+++
Sbjct: 362 ESTGKSLSKAVYDGIHRSLTSVGRFDEAE------EITKA-------MRNAGYEPDNITY 408
Query: 237 QKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQL 296
+ V +C+A + A +L Q+ G PDIKT+ ILI CK ++ A F ++
Sbjct: 409 SQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLE 468
Query: 297 KGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHV-CEPSFAVYKALMTWLCRGKKIS 355
KG DS LIDG + E A M+K+ +P + YK L+ L + KK
Sbjct: 469 KGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSE 528
Query: 356 LAFSL 360
A L
Sbjct: 529 EALDL 533
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 83/173 (47%), Gaps = 8/173 (4%)
Query: 270 TYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHM 329
Y+ + S G + A ++ K ++ G PD++TY L+ GL + +R E+A + D M
Sbjct: 372 VYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQM 431
Query: 330 LKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINAL-EEYFMKGEV 388
C P + L+ C+ ++ A + + L+ D++ ++ L + + + +
Sbjct: 432 EAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKF 491
Query: 389 ERAIRGLLELDFRFRDFNLAP----YSILLIGFCQAKKVDEALIIFSVLDEFN 437
E A L+E+ ++ N+ P Y +L+ + KK +EAL + ++ + N
Sbjct: 492 EGASIFLMEM---VKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQN 541
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 145/326 (44%), Gaps = 51/326 (15%)
Query: 57 KARRYNEAHSLYGRMIKGGILPDVILY---AIMLRGLSNEGRVGEA----VKMFAEMIQR 109
+ R +++A +L + K P+++ + +I+L ++ G E VKM E+ ++
Sbjct: 115 RMRYFDQAWALMAEVRKD--YPNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRK 172
Query: 110 GLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREA 169
D +N +++ FC ++ ARS+ ++ D T IL+ + G V
Sbjct: 173 KFGVDE--FNILLRAFCTEREMKEARSIFEKLHSRFN-PDVKTMNILLLGFKEAGDVTAT 229
Query: 170 QEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDH 229
+ +++M K G P++VT+ I+G CK EA LF M D
Sbjct: 230 ELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDM----------------DR 273
Query: 230 VSDSVSLQKKVEHMCEAGQTLN---AYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNG 286
+ +++Q + +G N A +L +++ G+ PD YN L++S K G+++G
Sbjct: 274 LDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSG 333
Query: 287 AFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCE----------- 335
A K+ K+++ KG+ PDSVT+ ++ G+ K ++ VCE
Sbjct: 334 AIKVMKEMEEKGIEPDSVTFHSMFIGM---------MKSKEFGFNGVCEYYQKMKERSLV 384
Query: 336 PSFAVYKALMTWLCRGKKISLAFSLY 361
P LM C +++L L+
Sbjct: 385 PKTPTIVMLMKLFCHNGEVNLGLDLW 410
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 146/352 (41%), Gaps = 40/352 (11%)
Query: 12 TFNVLLNGFCKQGKLEEAVSLLRLLERD--GRGIRLSGYSSLIDGFFKARRYNEAHSLYG 69
+ ++LL K G EE + +E++ + + ++ L+ F R EA S++
Sbjct: 141 SMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDEFNILLRAFCTEREMKEARSIFE 200
Query: 70 RMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIG 129
++ PDV I+L G G V + EM++RG P++ Y I GFC
Sbjct: 201 KL-HSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKR 259
Query: 130 QLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVR---EAQEMFNQMEKLGCFPSAV 186
A L ++ D L T IL + G+ R +A+++F+++ K G P
Sbjct: 260 NFGEALRLFEDM---DRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCG 316
Query: 187 TFNALINGLCKAGKLDEAHLLFYKME-IGKSP------SLFFRLAQGSDHVSDSVSLQKK 239
+NAL++ L K G + A + +ME G P S+F + + + + V
Sbjct: 317 AYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGV----- 371
Query: 240 VEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGL 299
CE Q ++ + +VP T +L+ FC G +N L+K + KG
Sbjct: 372 ----CEYYQ---------KMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGY 418
Query: 300 SPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKH---VCEPSFAVYKALMTWL 348
P L L R DAF+ ++ V EP VY+ L T L
Sbjct: 419 CPHGHALELLTTALCARRRANDAFECSWQTVERGRCVSEP---VYRMLETSL 467
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 141/351 (40%), Gaps = 26/351 (7%)
Query: 131 LDHARSLHVEI-SGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAV--- 186
D A +L E+ + L + +IL+C++ K G E E F +MEK F
Sbjct: 119 FDQAWALMAEVRKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEK-EIFRKKFGVD 177
Query: 187 TFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEA 246
FN L+ C ++ EA +F K+ +P D ++ + EA
Sbjct: 178 EFNILLRAFCTEREMKEARSIFEKLHSRFNP--------------DVKTMNILLLGFKEA 223
Query: 247 GQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTY 306
G ++ G P+ TY I I+ FCK N A +LF+D+
Sbjct: 224 GDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQIL 283
Query: 307 GTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLK 366
TLI G + A ++ D + K P Y ALM+ L + +S A + E +
Sbjct: 284 TTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEE 343
Query: 367 SLPGRDNDSINALEEYF-MKGEVERAIRGLLELDFRFRDFNLAPYS----ILLIGFCQAK 421
G + DS+ + M E G+ E + ++ +L P + +L+ FC
Sbjct: 344 K--GIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNG 401
Query: 422 KVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKG 472
+V+ L ++ + E + + L + LCA+R DA ++++G
Sbjct: 402 EVNLGLDLWKYMLEKGYCPHGHALELLTTALCARRRANDAFECSWQTVERG 452
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 20/215 (9%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R F+ + T+ + ++GFCK+ EA+ L ++R I + ++LI G AR
Sbjct: 236 MVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARN 295
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+A L+ + K G+ PD Y ++ L G V A+K+ EM ++G+ PD+ +++
Sbjct: 296 KIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHS 355
Query: 121 I-----------IKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREA 169
+ G C+ Q RSL + T T +L+ C G V
Sbjct: 356 MFIGMMKSKEFGFNGVCEYYQKMKERSL---------VPKTPTIVMLMKLFCHNGEVNLG 406
Query: 170 QEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEA 204
+++ M + G P L LC + ++A
Sbjct: 407 LDLWKYMLEKGYCPHGHALELLTTALCARRRANDA 441
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 94/222 (42%), Gaps = 15/222 (6%)
Query: 5 RFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEA 64
RF D+ T N+LL GF + G + + + G Y IDGF K R + EA
Sbjct: 205 RFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEA 264
Query: 65 HSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKG 124
L+ M + V + ++ G +A ++F E+ +RGL PD YNA++
Sbjct: 265 LRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSS 324
Query: 125 FCDIGQLDHARSLHVEISGHDGLHDTCT-HTILICEMCKKGMVREAQ-------EMFNQM 176
G + A + E+ D+ T H++ I GM++ + E + +M
Sbjct: 325 LMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFI------GMMKSKEFGFNGVCEYYQKM 378
Query: 177 EKLGCFPSAVTFNALINGLCKAGKLDEAHLLF-YKMEIGKSP 217
++ P T L+ C G+++ L+ Y +E G P
Sbjct: 379 KERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCP 420
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 138/331 (41%), Gaps = 30/331 (9%)
Query: 2 WM---RRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKA 58
WM R + D ++ L++ K+G+ A+ L ++ G S Y++LI
Sbjct: 122 WMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHT 181
Query: 59 RRYNEA-HSLYGRMIK-GGI---LPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLP 113
R +A + G + K GI P+V+ Y I+LR + G+V + +F ++ + P
Sbjct: 182 RDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSP 241
Query: 114 DAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMF 173
D + +N ++ + G + ++ + ++ D T +LI KK + ++ F
Sbjct: 242 DVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTF 301
Query: 174 NQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSL------------- 219
+ + P+ TFN++I KA +D+A +F KM ++ PS
Sbjct: 302 KSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC 361
Query: 220 --------FFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTY 271
F SD V + +L +E C G + A KL + V PD TY
Sbjct: 362 GSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTY 421
Query: 272 NILINSFCKAGNMNGAFKLFKDLQLKGLSPD 302
L ++ KA L K ++ G+ P+
Sbjct: 422 KFLYKAYTKADMKEQVQILMKKMEKDGIVPN 452
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 141/312 (45%), Gaps = 53/312 (16%)
Query: 77 LPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARS 136
+PD +Y+ ++ + +G+ A+ +F+EM G PDA YNA+I + D A++
Sbjct: 130 IPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAH--LHTRDKAKA 187
Query: 137 LHVEISGH-DGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGL 195
L ++ G+ D + KG+ R C P+ VT+N L+
Sbjct: 188 LE-KVRGYLDKM---------------KGIER-------------CQPNVVTYNILLRAF 218
Query: 196 CKAGKLDEAHLLFYKMEIGK-SPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYK 254
++GK+D+ + LF +++ SP ++ + V D+ ++ M EA
Sbjct: 219 AQSGKVDQVNALFKDLDMSPVSPDVY-----TFNGVMDAYGKNGMIKEM-EA-------- 264
Query: 255 LLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLY 314
+LT++ + PDI T+N+LI+S+ K + FK L P T+ ++I
Sbjct: 265 VLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYG 324
Query: 315 R---VEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGR 371
+ +++ E FK + M ++ PSF Y+ ++ +S A ++ E +S
Sbjct: 325 KARMIDKAEWVFKKMNDM-NYI--PSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVL 381
Query: 372 DNDSINALEEYF 383
++NA+ E +
Sbjct: 382 KASTLNAMLEVY 393
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 117/310 (37%), Gaps = 79/310 (25%)
Query: 147 LHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHL 206
+ D ++ LI M KKG R A +F++M+ GC P A +NALI AHL
Sbjct: 130 IPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALIT----------AHL 179
Query: 207 LFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVP 266
H D +KV + + + + P
Sbjct: 180 ----------------------HTRDKAKALEKVRGYLDKMKGIERCQ-----------P 206
Query: 267 DIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIR 326
++ TYNIL+ +F ++G ++ LFKDL + +SPD T+ ++D + ++ +
Sbjct: 207 NVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVL 266
Query: 327 DHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKG 386
M + C+P + L ++ Y K
Sbjct: 267 TRMRSNECKPDIITFNVL----------------------------------IDSYGKKQ 292
Query: 387 EVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNI--NINPTS 444
E E+ + L L ++ ++I + +A+ +D+A +F +++ N +
Sbjct: 293 EFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYE 352
Query: 445 CVHLISGLCA 454
C+ ++ G C
Sbjct: 353 CMIMMYGYCG 362
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 114/252 (45%), Gaps = 20/252 (7%)
Query: 78 PDVILYAIMLRGLSNEGRVGEAVKMFAEMIQ---RGLLPDAHCYNAIIKGFCDIGQLDHA 134
PD +Y +++G GRV + +M M + R PD Y ++ F + G +D A
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 135 RSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQM-EKLGCFPSAVTFNALIN 193
R + E++ + T+ +L+ CK+ + A+++ +M E G P V++N +I+
Sbjct: 472 RQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIID 531
Query: 194 GLCKAGKLDEAHLLFYKMEI-GKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNA 252
G A F +M G +P+ +S ++ +GQ A
Sbjct: 532 GCILIDDSAGALAFFNEMRTRGIAPT--------------KISYTTLMKAFAMSGQPKLA 577
Query: 253 YKLLTQLA-DSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLID 311
++ ++ D V D+ +N+L+ +C+ G + A ++ ++ G P+ TYG+L +
Sbjct: 578 NRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLAN 637
Query: 312 GLYRVEREEDAF 323
G+ + + DA
Sbjct: 638 GVSQARKPGDAL 649
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 116/254 (45%), Gaps = 20/254 (7%)
Query: 48 YSSLIDGFFKARRYNEAHSLYGRMIKG---GILPDVILYAIMLRGLSNEGRVGEAVKMFA 104
Y++L+ G+ K R + + M + PD + Y ++ N G + A ++ A
Sbjct: 417 YTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLA 476
Query: 105 EMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLH-DTCTHTILI--CEMC 161
EM + G+ + YN ++KG+C Q+D A L E++ G+ D ++ I+I C +
Sbjct: 477 EMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILI 536
Query: 162 KKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFF 221
A FN+M G P+ +++ L+ +G+ A+ +F +M P +
Sbjct: 537 DDSA--GALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMM--NDPRVKV 592
Query: 222 RLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKA 281
D ++ VE C G +A ++++++ ++G P++ TY L N +A
Sbjct: 593 ----------DLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQA 642
Query: 282 GNMNGAFKLFKDLQ 295
A L+K+++
Sbjct: 643 RKPGDALLLWKEIK 656
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 35/202 (17%)
Query: 12 TFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRM 71
T+NVLL G+CKQ +++ A LLR + D
Sbjct: 489 TYNVLLKGYCKQLQIDRAEDLLREMTED-------------------------------- 516
Query: 72 IKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQL 131
GI PDV+ Y I++ G A+ F EM RG+ P Y ++K F GQ
Sbjct: 517 --AGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQP 574
Query: 132 DHARSLHVEISGHDGLH-DTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNA 190
A + E+ + D +L+ C+ G++ +AQ + ++M++ G +P+ T+ +
Sbjct: 575 KLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGS 634
Query: 191 LINGLCKAGKLDEAHLLFYKME 212
L NG+ +A K +A LL+ +++
Sbjct: 635 LANGVSQARKPGDALLLWKEIK 656
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/334 (20%), Positives = 131/334 (39%), Gaps = 85/334 (25%)
Query: 106 MIQRGLLPDAHCYNAIIKGFCDIGQL-DHARSLHVEISGHD--GLHDTCTHTILICEMCK 162
++ + PD+ Y ++KG+ G++ D AR L D D T+T ++
Sbjct: 405 LLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVN 464
Query: 163 KGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFR 222
G++ A+++ +M ++G + +T+N L+ G CK ++D A L
Sbjct: 465 AGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLL-------------- 510
Query: 223 LAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAG 282
M E D+G+ PD+ +YNI+I+
Sbjct: 511 ------------------REMTE---------------DAGIEPDVVSYNIIIDGCILID 537
Query: 283 NMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYK 342
+ GA F +++ +G++P ++Y TL+ + + A ++ D M+ +P V
Sbjct: 538 DSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMN---DPRVKV-- 592
Query: 343 ALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMK-GEVERAIRGLLELDFR 401
L+ W N L E + + G +E A R + +
Sbjct: 593 DLIAW-----------------------------NMLVEGYCRLGLIEDAQRVVSRMKEN 623
Query: 402 FRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDE 435
N+A Y L G QA+K +AL+++ + E
Sbjct: 624 GFYPNVATYGSLANGVSQARKPGDALLLWKEIKE 657
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 131/303 (43%), Gaps = 49/303 (16%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D+ TF VL++ CK G+ + S++ + G G Y+++IDG+ KA + E S+
Sbjct: 214 DVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVL 273
Query: 69 GRMIK-GGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCD 127
MI+ G LPDV ++ N + + ++ G+ PD +N +I F
Sbjct: 274 ADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGK 333
Query: 128 IGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVT 187
G S+ + T T+ I+I K G + + ++F +M+ G P+++T
Sbjct: 334 AGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSIT 393
Query: 188 FNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAG 247
+ +L+N KAG L K+ DSV
Sbjct: 394 YCSLVNAYSKAG-------LVVKI--------------------DSV------------- 413
Query: 248 QTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYG 307
L Q+ +S VV D +N +IN++ +AG++ +L+ ++ + PD +T+
Sbjct: 414 --------LRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFA 465
Query: 308 TLI 310
T+I
Sbjct: 466 TMI 468
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 5/180 (2%)
Query: 2 WMRRFQ-----RDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFF 56
W RFQ D+ TFN+L+ F K G ++ S++ +E+ + Y+ +I+ F
Sbjct: 308 WYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFG 367
Query: 57 KARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAH 116
KA R + ++ +M G+ P+ I Y ++ S G V + + +++ ++ D
Sbjct: 368 KAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTP 427
Query: 117 CYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQM 176
+N II + G L + L++++ D T +I G+ QE+ QM
Sbjct: 428 FFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQM 487
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 98/244 (40%), Gaps = 39/244 (15%)
Query: 11 ATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIR-LSGYSSLIDGFFKARRYNEAHSLYG 69
T+N +++G+ K G EE S+L + DG + + +S+I + R + S Y
Sbjct: 251 VTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYS 310
Query: 70 RMIKGGILPDV-----------------------------------ILYAIMLRGLSNEG 94
R G+ PD+ + Y I++ G
Sbjct: 311 RFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAG 370
Query: 95 RVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHT 154
R+ + +F +M +G+ P++ Y +++ + G + S+ +I D + DT
Sbjct: 371 RIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFN 430
Query: 155 ILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM--- 211
+I + G + +E++ QME+ C P +TF +I G D L +M
Sbjct: 431 CIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMISS 490
Query: 212 EIGK 215
+IGK
Sbjct: 491 DIGK 494
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 125/297 (42%), Gaps = 17/297 (5%)
Query: 159 EMCKKGMVREAQEMFNQMEKLGCF-PSAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKS 216
E K+ + A ++FN + K + P T+ L L + D+A LLF M G
Sbjct: 117 EAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLK 176
Query: 217 PSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILIN 276
P++ D + +S+ K E + +A TL K + S PD+ T+ +LI+
Sbjct: 177 PTI--------DVYTSLISVYGKSELLDKAFSTLEYMKSV-----SDCKPDVFTFTVLIS 223
Query: 277 SFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCE- 335
CK G + + ++ G+ +VTY T+IDG + E+ + M++
Sbjct: 224 CCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSL 283
Query: 336 PSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGL 395
P +++ G+ + S Y + D + N L F K + + + +
Sbjct: 284 PDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSV 343
Query: 396 LE-LDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISG 451
++ ++ RF Y+I++ F +A ++++ +F + + N + L++
Sbjct: 344 MDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNA 400
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 101/213 (47%), Gaps = 11/213 (5%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLL------ERDGRGIRLSGYSSLIDG 54
M R +R +FN LLN K + + + L E D ++ Y++LI G
Sbjct: 132 MPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPD-----VASYNTLIKG 186
Query: 55 FFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPD 114
+ EA +L + G+ PD I + I+L +G+ E +++A M+++ + D
Sbjct: 187 LCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRD 246
Query: 115 AHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFN 174
YNA + G + + SL ++ G++ D T T +I +G + EA +
Sbjct: 247 IRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYK 306
Query: 175 QMEKLGCFPSAVTFNALINGLCKAGKLDEAHLL 207
++EK GC P FN+L+ +CKAG L+ A+ L
Sbjct: 307 EIEKNGCRPLKFVFNSLLPAICKAGDLESAYEL 339
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 126/291 (43%), Gaps = 39/291 (13%)
Query: 63 EAHSLYGRMIKGGILPDVI-LYAIMLRGLSNEGRVG---EAVKMFAEMIQRGLLPDAHCY 118
E + Y M K G + +I LY GRVG A K+F EM +R A +
Sbjct: 95 EEQNKYPNMSKEGFVARIINLY----------GRVGMFENAQKVFDEMPERNCKRTALSF 144
Query: 119 NAIIKGFCDIGQLDHARSLHVEISGHDGLH-DTCTHTILICEMCKKGMVREAQEMFNQME 177
NA++ + + D + E+ G + D ++ LI +C KG EA + +++E
Sbjct: 145 NALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIE 204
Query: 178 KLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM-----------------------EIG 214
G P +TFN L++ GK +E ++ +M +
Sbjct: 205 NKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSE 264
Query: 215 KSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNIL 274
+ SLF +L +G++ D + ++ G+ A ++ +G P +N L
Sbjct: 265 EMVSLFDKL-KGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSL 323
Query: 275 INSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKI 325
+ + CKAG++ A++L K++ K L D ++D L + ++++A +I
Sbjct: 324 LPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEI 374
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 82/166 (49%), Gaps = 4/166 (2%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLL-RLLERD-GRGIRLSGYSSLIDGFFKARRYNEAHS 66
D TFN+LL+ +GK EE + R++E++ R IR Y++ + G + E S
Sbjct: 211 DHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIR--SYNARLLGLAMENKSEEMVS 268
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
L+ ++ + PDV + M++G +EG++ EA+ + E+ + G P +N+++ C
Sbjct: 269 LFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAIC 328
Query: 127 DIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEM 172
G L+ A L EI L D ++ + K EA+E+
Sbjct: 329 KAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEI 374
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 90/206 (43%), Gaps = 16/206 (7%)
Query: 164 GMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM--EIGKSPSLFF 221
GM AQ++F++M + C +A++FNAL+N + K D +F ++ ++ P
Sbjct: 120 GMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEP---- 175
Query: 222 RLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKA 281
D S ++ +C G A L+ ++ + G+ PD T+NIL++
Sbjct: 176 ----------DVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTK 225
Query: 282 GNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVY 341
G +++ + K + D +Y + GL + E+ + D + + +P +
Sbjct: 226 GKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTF 285
Query: 342 KALMTWLCRGKKISLAFSLYLEYLKS 367
A++ K+ A + Y E K+
Sbjct: 286 TAMIKGFVSEGKLDEAITWYKEIEKN 311
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 111/239 (46%), Gaps = 13/239 (5%)
Query: 78 PDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSL 137
P+V +Y ++ L + +A ++F EMI G + + Y A++ + G+ D A +L
Sbjct: 148 PNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTL 207
Query: 138 HVEI-SGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLC 196
+ S H+ D T++ILI + + Q++ + M + G P+ +T+N LI+
Sbjct: 208 LERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYG 267
Query: 197 KAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLL 256
KA +F +ME S ++ D DS ++ + GQ
Sbjct: 268 KAK-------MFVEME-----STLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCY 315
Query: 257 TQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYR 315
+ SG+ P+I+T+NIL++S+ K+GN + + +Q S VTY +ID R
Sbjct: 316 EKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGR 374
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/314 (19%), Positives = 122/314 (38%), Gaps = 56/314 (17%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
Q D+ T+++L+ F + ++ LL + R G Y++LID + KA+ + E S
Sbjct: 218 QPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMES 277
Query: 67 LYGRMI-KGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
+M+ + PD LR G++ + + G+ P+ +N ++ +
Sbjct: 278 TLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSY 337
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
G ++ + + T+ ++I + G +++ + +F M+ FPS
Sbjct: 338 GKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSC 397
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCE 245
VT +L+ +A K D +IG R + SD
Sbjct: 398 VTLCSLVRAYGRASKAD---------KIGG----VLRFIENSD----------------- 427
Query: 246 AGQTLNAYKLLTQLADSGVVPDIKTYNILINSFC---KAGNMNGAFKLFKDLQLKGLSPD 302
+ D+ +N L++++ K M G +L ++ KG PD
Sbjct: 428 ------------------IRLDLVFFNCLVDAYGRMEKFAEMKGVLEL---MEKKGFKPD 466
Query: 303 SVTYGTLIDGLYRV 316
+TY T++ YR+
Sbjct: 467 KITYRTMVKA-YRI 479
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/379 (19%), Positives = 152/379 (40%), Gaps = 74/379 (19%)
Query: 155 ILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIG 214
I++ CK+ +A E+F +M GC + + AL++ ++G+ D A L +M
Sbjct: 157 IVMLGKCKQP--EKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERM--- 211
Query: 215 KSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNIL 274
K H C+ PD+ TY+IL
Sbjct: 212 ------------------------KSSHNCQ--------------------PDVHTYSIL 227
Query: 275 INSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYR----VEREEDAFKIRDHML 330
I SF + + L D++ +G+ P+++TY TLID + VE E ++ +
Sbjct: 228 IKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQM---LG 284
Query: 331 KHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEVER 390
+ C+P + + +I + + Y ++ S + + N L + + K +
Sbjct: 285 EDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYK 344
Query: 391 AIRGLLELDFRFR-DFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLI 449
+ ++E ++ + + Y++++ F +A + + +F ++ I SCV L
Sbjct: 345 KMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIF---PSCVTLC 401
Query: 450 S-----GLCAKRNLYDAVVIFLYSLDKGFELGPKICKELLECLLVSQDKRKYAIDLIGR- 503
S G +K + V+ F+ + D +L CL+ + + + ++ G
Sbjct: 402 SLVRAYGRASKADKIGGVLRFIENSDIRLDLV------FFNCLVDAYGRMEKFAEMKGVL 455
Query: 504 --MKSRGYRLHKYQYRQTI 520
M+ +G++ K YR +
Sbjct: 456 ELMEKKGFKPDKITYRTMV 474
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 92/425 (21%), Positives = 180/425 (42%), Gaps = 65/425 (15%)
Query: 48 YSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAI--MLRGLSNEGRVGEAVKMFAE 105
Y++++D K R ++ L M K V L + ++R L+ G+ +AV F E
Sbjct: 169 YNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLE 228
Query: 106 MIQR-GLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKG 164
M + G+ D N+++ ++HA H + +
Sbjct: 229 MEKSYGVKTDTIAMNSLMDALVKENSIEHA------------------HEVFL------- 263
Query: 165 MVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLA 224
++F+ ++ P A TFN LI+G CKA K D+A + M++
Sbjct: 264 ------KLFDTIK-----PDARTFNILIHGFCKARKFDDARAMMDLMKV----------- 301
Query: 225 QGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNM 284
++ D V+ VE C+ G ++L ++ ++G P++ TY I+++S K+ +
Sbjct: 302 --TEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQV 359
Query: 285 NGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKAL 344
A +++ ++ G PD+ Y +LI L + R +DA +I + M VY +
Sbjct: 360 AEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTM 419
Query: 345 MTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMK------GEVERAIRGLLEL 398
++ + +A L LK + + +S + E + + + + G+L
Sbjct: 420 ISAALHHSRDEMALRL----LKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLH 475
Query: 399 DFRFRD--FNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKR 456
D +++ Y +L+ G C + KV+EA + F + ++C L+ L K+
Sbjct: 476 HMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDEL-EKK 534
Query: 457 NLYDA 461
N+ +A
Sbjct: 535 NMAEA 539
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 133/324 (41%), Gaps = 19/324 (5%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEA----VSLLRLLERDGRGIRLSGYSSLIDGFFKARRYN 62
+ D N L++ K+ +E A + L ++ D R + LI GF KAR+++
Sbjct: 236 KTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNI-----LIHGFCKARKFD 290
Query: 63 EAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAII 122
+A ++ M PDV+ Y + EG +M EM + G P+ Y ++
Sbjct: 291 DARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVM 350
Query: 123 KGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCF 182
Q+ A ++ ++ + D ++ LI + K G ++A E+F M G
Sbjct: 351 HSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVR 410
Query: 183 PSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEH 242
+ +N +I+ + + A L +ME + S S +V L ++
Sbjct: 411 RDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESC-------SPNVETYAPL---LKM 460
Query: 243 MCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPD 302
C + LL + + V D+ TY +LI C +G + A F++ KG+ P
Sbjct: 461 CCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPR 520
Query: 303 SVTYGTLIDGLYRVEREEDAFKIR 326
T L+D L + E KI+
Sbjct: 521 DSTCKMLVDELEKKNMAEAKLKIQ 544
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 99/213 (46%), Gaps = 7/213 (3%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M + F D+ T+ + +CK+G +L + +G + Y+ ++ K+++
Sbjct: 299 MKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQ 358
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
EA +Y +M + G +PD Y+ ++ LS GR +A ++F +M +G+ D YN
Sbjct: 359 VAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNT 418
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTC-----THTILICEMCKKGMVREAQEMFNQ 175
+I + + A L + +G ++C T+ L+ C K ++ + +
Sbjct: 419 MISAALHHSRDEMALRLLKRMEDEEG--ESCSPNVETYAPLLKMCCHKKKMKLLGILLHH 476
Query: 176 MEKLGCFPSAVTFNALINGLCKAGKLDEAHLLF 208
M K T+ LI GLC +GK++EA L F
Sbjct: 477 MVKNDVSIDVSTYILLIRGLCMSGKVEEACLFF 509
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 169/381 (44%), Gaps = 47/381 (12%)
Query: 4 RRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKA----R 59
R +R++ T+ +++G+ K G E+ L + ++G ++++ S+ + FKA
Sbjct: 233 RMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEG-DVKVN--SNTLAVMFKACRDFV 289
Query: 60 RYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYN 119
RY E ++G + + + D+ L ++ S G +GEA +F M + D+ +N
Sbjct: 290 RYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNK----DSVSWN 345
Query: 120 AIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKL 179
++I G Q+ A L ++ G D + T +I KG + + E+F M +
Sbjct: 346 SLITGLVQRKQISEAYELFEKMPGKD----MVSWTDMIKGFSGKGEISKCVELFGMMPE- 400
Query: 180 GCFPSAVTFNALINGLCKAGKLDEAHLLFYKM---EIGKSPSLFFRLAQGSDHVSDSVSL 236
+T+ A+I+ G +EA F+KM E+ + F S +S + SL
Sbjct: 401 ---KDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTF------SSVLSATASL 451
Query: 237 QKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQL 296
+E + G+ + +V D+ N L++ +CK GN N A+K+F +
Sbjct: 452 ADLIEGLQIHGRVVKM----------NIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCIS- 500
Query: 297 KGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISL 356
P+ V+Y T+I G + A K+ + EP+ + AL++ + L
Sbjct: 501 ---EPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDL 557
Query: 357 AFSLYLEYLKSL----PGRDN 373
+ Y + +KS PG D+
Sbjct: 558 GWK-YFKSMKSSYNIEPGPDH 577
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 100/428 (23%), Positives = 184/428 (42%), Gaps = 88/428 (20%)
Query: 48 YSSLIDGFFKARRYNEAHSLYGRM-IKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEM 106
Y+++I GF +A R++EA LY +K D + ++L G G+ EAV++F M
Sbjct: 147 YATMITGFVRAGRFDEAEFLYAETPVK---FRDSVASNVLLSGYLRAGKWNEAVRVFQGM 203
Query: 107 IQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMV 166
+ ++ C ++++ G+C +G++ ARSL
Sbjct: 204 AVKEVV---SC-SSMVHGYCKMGRIVDARSL----------------------------- 230
Query: 167 REAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQG 226
F++M + + +T+ A+I+G KAG F++ G LF R+ Q
Sbjct: 231 ------FDRMTE----RNVITWTAMIDGYFKAG--------FFEDGFG----LFLRMRQE 268
Query: 227 SDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVP------DIKTYNILINSFCK 280
D +S +L M +A + Y+ +Q+ G+V D+ N L++ + K
Sbjct: 269 GDVKVNSNTLAV----MFKACRDFVRYREGSQI--HGLVSRMPLEFDLFLGNSLMSMYSK 322
Query: 281 AGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAV 340
G M A +F ++ K DSV++ +LI GL + ++ +A+++ + M P
Sbjct: 323 LGYMGEAKAVFGVMKNK----DSVSWNSLITGLVQRKQISEAYELFEKM------PG--- 369
Query: 341 YKALMTW--LCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFM-KGEVERAIRGLLE 397
K +++W + +G S +E +P +DN + A+ F+ G E A+ +
Sbjct: 370 -KDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHK 428
Query: 398 LDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRN 457
+ + N +S +L + E L I + + NI + + L+S C N
Sbjct: 429 MLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGN 488
Query: 458 LYDAVVIF 465
DA IF
Sbjct: 489 TNDAYKIF 496
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 92/421 (21%), Positives = 180/421 (42%), Gaps = 74/421 (17%)
Query: 94 GRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTH 153
G + EA +F +M R ++ + A+I + + G++ A + E+ + T ++
Sbjct: 64 GNLQEAEAIFRQMSNRSIVS----WIAMISAYAENGKMSKAWQVFDEMP----VRVTTSY 115
Query: 154 TILICEMCK-KGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKME 212
+I M K K + +A E+F + + +AV++ +I G +AG+ DEA L+ +
Sbjct: 116 NAMITAMIKNKCDLGKAYELFCDIPE----KNAVSYATMITGFVRAGRFDEAEFLYAETP 171
Query: 213 IGKSPSL--------FFRLAQGSD--------HVSDSVSLQKKVEHMCEAGQTLNAYKLL 256
+ S+ + R + ++ V + VS V C+ G+ ++A L
Sbjct: 172 VKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLF 231
Query: 257 TQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKG--------------LSPD 302
++ + V+ T+ +I+ + KAG F LF ++ +G D
Sbjct: 232 DRMTERNVI----TWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRD 287
Query: 303 SVTY--GTLIDGLY-RVEREEDAFKIRDHM-----LKHVCEPS--FAV--------YKAL 344
V Y G+ I GL R+ E D F M L ++ E F V + +L
Sbjct: 288 FVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSL 347
Query: 345 MTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFM-KGEVERAIRGLLELDFRFR 403
+T L + K+IS A+ L+ + +PG+D S + + F KGE+ + + EL
Sbjct: 348 ITGLVQRKQISEAYELF----EKMPGKDMVSWTDMIKGFSGKGEISKCV----ELFGMMP 399
Query: 404 DFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVV 463
+ + ++ ++ F +EAL F + + + N + ++S + +L + +
Sbjct: 400 EKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQ 459
Query: 464 I 464
I
Sbjct: 460 I 460
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 141/333 (42%), Gaps = 34/333 (10%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
+RD+ ++N ++ G+ + G L EA+ + R G ++ L+ K+R+
Sbjct: 141 ERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQ 200
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
+G+++ G L +V+L ++ + G++ A + F EM + D H + +I G+
Sbjct: 201 AHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMT----VKDIHIWTTLISGYA 256
Query: 127 DIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAV 186
+G ++ A L E+ + + + T LI ++G A ++F +M LG P
Sbjct: 257 KLGDMEAAEKLFCEMPEKNPV----SWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQF 312
Query: 187 TFNALINGLCKAGKL---DEAHLLFYKMEI--------------GKSPSL-----FFRLA 224
TF++ + L E H + + KS SL FR+
Sbjct: 313 TFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRIC 372
Query: 225 QGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNM 284
D D V + + + G A ++L + V P+ T +++N+ +G +
Sbjct: 373 ---DDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLV 429
Query: 285 NGAFKLFKDLQLK-GLSPDSVTYGTLIDGLYRV 316
+ F+ + ++ G+ PD Y LID L R
Sbjct: 430 EEGLRWFESMTVQHGIVPDQEHYACLIDLLGRA 462
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 161/334 (48%), Gaps = 48/334 (14%)
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGL--HDTCTHTILICEMCKKGMVREAQEMFNQMEK 178
+I C +G++ AR L DGL D T T +I K G +REA+E+F++++
Sbjct: 52 LIGELCKVGKIAEARKLF------DGLPERDVVTWTHVITGYIKLGDMREARELFDRVDS 105
Query: 179 LGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQK 238
+ VT+ A+++G ++ +L A +LF +M P + VS
Sbjct: 106 R---KNVVTWTAMVSGYLRSKQLSIAEMLFQEM-----PE------------RNVVSWNT 145
Query: 239 KVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKG 298
++ ++G+ A +L ++ + +V ++N ++ + + G ++ A LF+ + +
Sbjct: 146 MIDGYAQSGRIDKALELFDEMPERNIV----SWNSMVKALVQRGRIDEAMNLFERMPRR- 200
Query: 299 LSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAF 358
D V++ ++DGL + + ++A ++ D M E + + A++T + +I A
Sbjct: 201 ---DVVSWTAMVDGLAKNGKVDEARRLFDCM----PERNIISWNAMITGYAQNNRIDEAD 253
Query: 359 SLYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFC 418
L+ + +P RD S N + F++ GL + R + N+ ++ ++ G+
Sbjct: 254 QLF----QVMPERDFASWNTMITGFIRNREMNKACGLFD---RMPEKNVISWTTMITGYV 306
Query: 419 QAKKVDEALIIFS-VLDEFNININPTSCVHLISG 451
+ K+ +EAL +FS +L + ++ N + V ++S
Sbjct: 307 ENKENEEALNVFSKMLRDGSVKPNVGTYVSILSA 340
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 146/333 (43%), Gaps = 47/333 (14%)
Query: 16 LLNGFCKQGKLEEAVSLLR-LLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKG 74
L+ CK GK+ EA L L ERD + ++ +I G+ K EA L+ R+
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERD-----VVTWTHVITGYIKLGDMREARELFDRV--- 103
Query: 75 GILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHA 134
+V+ + M+ G ++ A +F EM +R ++ +N +I G+ G++D A
Sbjct: 104 DSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVV----SWNTMIDGYAQSGRIDKA 159
Query: 135 RSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALING 194
L E+ + + ++ + ++G + EA +F +M + V++ A+++G
Sbjct: 160 LELFDEMPERN----IVSWNSMVKALVQRGRIDEAMNLFERMPRR----DVVSWTAMVDG 211
Query: 195 LCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYK 254
L K GK+DEA LF M P + +S + + + A +
Sbjct: 212 LAKNGKVDEARRLFDCM-----PE------------RNIISWNAMITGYAQNNRIDEADQ 254
Query: 255 LLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLY 314
L + + D ++N +I F + MN A LF + K + +++ T+I G
Sbjct: 255 LFQVMPER----DFASWNTMITGFIRNREMNKACGLFDRMPEKNV----ISWTTMITGYV 306
Query: 315 RVEREEDAFKIRDHMLKH-VCEPSFAVYKALMT 346
+ E+A + ML+ +P+ Y ++++
Sbjct: 307 ENKENEEALNVFSKMLRDGSVKPNVGTYVSILS 339
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/330 (20%), Positives = 155/330 (46%), Gaps = 51/330 (15%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLL-RLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
+R++ ++N +++G+ + G++++A+ L + ER+ + ++S++ + R +EA
Sbjct: 137 ERNVVSWNTMIDGYAQSGRIDKALELFDEMPERN-----IVSWNSMVKALVQRGRIDEAM 191
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
+L+ RM + DV+ + M+ GL+ G+V EA ++F M +R ++ +NA+I G+
Sbjct: 192 NLFERMPR----RDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNII----SWNAMITGY 243
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
++D A L + D + +I + + +A +F++M + +
Sbjct: 244 AQNNRIDEADQLFQVMPE----RDFASWNTMITGFIRNREMNKACGLFDRMPE----KNV 295
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKM--------EIGKSPSLF---------------FR 222
+++ +I G + + +EA +F KM +G S+ +
Sbjct: 296 ISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQ 355
Query: 223 LAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVV--PDIKTYNILINSFCK 280
L S H + + + ++G+ + A K+ D+G+V D+ ++N +I +
Sbjct: 356 LISKSVHQKNEIVTSALLNMYSKSGELIAARKMF----DNGLVCQRDLISWNSMIAVYAH 411
Query: 281 AGNMNGAFKLFKDLQLKGLSPDSVTYGTLI 310
G+ A +++ ++ G P +VTY L+
Sbjct: 412 HGHGKEAIEMYNQMRKHGFKPSAVTYLNLL 441
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 110/239 (46%), Gaps = 45/239 (18%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLL-ERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
+R++ ++N ++ G+ + +++EA L +++ ERD + ++++I GF + R N+A
Sbjct: 230 ERNIISWNAMITGYAQNNRIDEADQLFQVMPERD-----FASWNTMITGFIRNREMNKAC 284
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLL-PDAHCYNAIIKG 124
L+ RM + +VI + M+ G EA+ +F++M++ G + P+ Y +I+
Sbjct: 285 GLFDRMPE----KNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSA 340
Query: 125 FCDIGQLDHARSLHVEISGH------------------------------DGL---HDTC 151
D+ L + +H IS +GL D
Sbjct: 341 CSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLI 400
Query: 152 THTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYK 210
+ +I G +EA EM+NQM K G PSAVT+ L+ AG L E + F+K
Sbjct: 401 SWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAG-LVEKGMEFFK 458
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 2/200 (1%)
Query: 15 VLLNGFCKQ-GKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIK 73
L+ CK G + A +L L + R + +S +I + R +A +L MI
Sbjct: 341 TLITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMIS 400
Query: 74 GGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDH 133
G P ++ +++ S G + EA ++ M RGL PD + Y II G+ G +D
Sbjct: 401 KGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDE 460
Query: 134 ARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALIN 193
A+ + E T+ LI CK EA ++ N+M++ G P+A +N LI
Sbjct: 461 AQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQ 520
Query: 194 GLC-KAGKLDEAHLLFYKME 212
C KA ++A +LF +M+
Sbjct: 521 SFCLKALDWEKAEVLFEEMK 540
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 130/301 (43%), Gaps = 16/301 (5%)
Query: 51 LIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRG 110
LI F K + A ++ + + G P+ Y + L L + A + +M++ G
Sbjct: 237 LIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSG 296
Query: 111 LLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKK-GMVREA 169
+L + II FC G+ + A S++ + LI +CK G + A
Sbjct: 297 VLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTITFA 356
Query: 170 QEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDH 229
QEM + F+ +I+ LC+ + +A L M I K P A G+
Sbjct: 357 QEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDM-ISKGP------APGN-- 407
Query: 230 VSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADS-GVVPDIKTYNILINSFCKAGNMNGAF 288
++ V H C L+ K + +L +S G+ PD+ TY ++I+ + K G M+ A
Sbjct: 408 -----AVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQ 462
Query: 289 KLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWL 348
++ + + K VTY LI G ++E ++A K+ + M + +P+ Y L+
Sbjct: 463 EILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSF 522
Query: 349 C 349
C
Sbjct: 523 C 523
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 145/337 (43%), Gaps = 29/337 (8%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
+L N L+ F K GK + A + E G Y ++ K + A S+
Sbjct: 230 NLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVC 289
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMF--AEMIQRGLLPDAHCYNAIIKGFC 126
+M+K G+L + ++ EG+ EA ++ A+ ++ L P +I C
Sbjct: 290 EKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPP--RFVATLITALC 347
Query: 127 -DIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
+ G + A+ + ++SG + +I +C+ V++A+ + M G P
Sbjct: 348 KNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGN 407
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKMEI-GKSPSLFFRL------AQGS--DHVSDSVSL 236
FN +++ K G LDEA + ME G P ++ A+G D + ++
Sbjct: 408 AVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAE 467
Query: 237 QKK-------------VEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFC-KAG 282
KK + C+ + A KLL ++ GV P+ YN LI SFC KA
Sbjct: 468 AKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKAL 527
Query: 283 NMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVERE 319
+ A LF++++ KGL ++++ G LI + +E E
Sbjct: 528 DWEKAEVLFEEMKQKGLHLNAISQG-LIRAVKEMESE 563
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/385 (20%), Positives = 144/385 (37%), Gaps = 86/385 (22%)
Query: 94 GRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTH 153
G+ A +F++ + G P+A Y ++ C +D A S
Sbjct: 245 GKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACS----------------- 287
Query: 154 TILICE-MCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKME 212
+CE M K G++ E ++M N +I CK GK +EA+ + Y++
Sbjct: 288 ---VCEKMLKSGVLSEGEQMGN----------------IITWFCKEGKAEEAYSV-YELA 327
Query: 213 IGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLN-AYKLLTQLADSGVVPDIKTY 271
K SL R + + +C+ T+ A ++L L+ IK +
Sbjct: 328 KTKEKSLPPRF------------VATLITALCKNDGTITFAQEMLGDLSGEARRRGIKPF 375
Query: 272 NILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLK 331
+ +I+S C+ N+ A L D+ KG +P + + ++ + ++A ++ M
Sbjct: 376 SDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMES 435
Query: 332 HVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEVERA 391
+P Y +++ +G G ++ A
Sbjct: 436 RGLKPDVYTYTVIISGYAKG----------------------------------GMMDEA 461
Query: 392 IRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISG 451
L E + + + Y L+ G+C+ ++ DEAL + + +D F + N LI
Sbjct: 462 QEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQS 521
Query: 452 LCAKR-NLYDAVVIFLYSLDKGFEL 475
C K + A V+F KG L
Sbjct: 522 FCLKALDWEKAEVLFEEMKQKGLHL 546
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 6/126 (4%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M R + D+ T+ V+++G+ K G ++EA +L ++ + + Y +LI G+ K
Sbjct: 433 MESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEE 492
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVK-MFAEMIQRGLLPDAHCYN 119
Y+EA L M + G+ P+ Y +++ + E + +F EM Q+GL H N
Sbjct: 493 YDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGL----H-LN 547
Query: 120 AIIKGF 125
AI +G
Sbjct: 548 AISQGL 553
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 92/196 (46%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D +FN+ + FC+ G L+ A +R +E+ G + Y++LI +K R + L+
Sbjct: 176 DAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLW 235
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
M+ G P++ + + ++ L N R +A + M + + PD+ YN +IKGF
Sbjct: 236 NLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLA 295
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
D A ++ + G + + +I +CK G A M + +P+ T
Sbjct: 296 RFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTV 355
Query: 189 NALINGLCKAGKLDEA 204
L+ GL K G+LD+A
Sbjct: 356 EMLLKGLVKKGQLDQA 371
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 99/232 (42%), Gaps = 21/232 (9%)
Query: 110 GLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREA 169
G+ DA +N IK FC++G LD A E+ D T+T LI + K
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIG 231
Query: 170 QEMFNQMEKLGCFPSAVTFNALINGLC---KAGKLDEAHLLFYKMEIGKSPSLFFRLAQG 226
++N M GC P+ TFN I L +A ++ LL K+++
Sbjct: 232 NGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVE------------ 279
Query: 227 SDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNG 286
DS++ ++ A A ++ T + G P++K Y +I+ CKAGN +
Sbjct: 280 ----PDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDL 335
Query: 287 AFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSF 338
A+ + KD K P+ T L+ GL + + + A I + L H P F
Sbjct: 336 AYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIME--LVHRRVPPF 385
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 121/279 (43%), Gaps = 55/279 (19%)
Query: 162 KKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFF 221
K GM ++A + F M+ GC S +FNA + L L H ++ + +PS +
Sbjct: 118 KAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDL---HTIWEFLH--DAPSKY- 171
Query: 222 RLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSF--- 278
G D D+VS ++ CE G AY + ++ SG+ PD+ TY LI++
Sbjct: 172 ----GID--IDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKH 225
Query: 279 -----------------CK------------------AGNMNGAFKLFKDLQLKGLSPDS 303
CK A + N L LQ++ PDS
Sbjct: 226 ERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVE---PDS 282
Query: 304 VTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLE 363
+TY +I G + + A ++ M +P+ +Y+ ++ +LC+ LA+++ +
Sbjct: 283 ITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKD 342
Query: 364 YLKSLPGRDNDSINALEEYFM-KGEVERAIRGLLELDFR 401
++ + D++ L + + KG++++A + ++EL R
Sbjct: 343 CMRKKWYPNLDTVEMLLKGLVKKGQLDQA-KSIMELVHR 380
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 1/165 (0%)
Query: 263 GVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDA 322
G+ D ++NI I SFC+ G ++GA+ ++++ GL+PD VTY TLI LY+ ER
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIG 231
Query: 323 FKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSIN-ALEE 381
+ + M+ C+P+ + + +L ++ A L L K D+ + N ++
Sbjct: 232 NGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKG 291
Query: 382 YFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEA 426
+F+ + A R + + NL Y ++ C+A D A
Sbjct: 292 FFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLA 336
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 60/129 (46%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
+L TFNV + + + +A LL L+ + Y+ +I GFF AR + A +Y
Sbjct: 246 NLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVY 305
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
M G P++ +Y M+ L G A M + +++ P+ ++KG
Sbjct: 306 TAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKK 365
Query: 129 GQLDHARSL 137
GQLD A+S+
Sbjct: 366 GQLDQAKSI 374
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 136/314 (43%), Gaps = 36/314 (11%)
Query: 11 ATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIR-LSGYSSLIDGFFKARRYNEAHSL-Y 68
TF ++ + ++EA+ L D +R + + +L+D + + EA L +
Sbjct: 118 VTFRIVFKRYVTAHLVQEAIDAYDKL--DDFNLRDETSFYNLVDALCEHKHVVEAEELCF 175
Query: 69 GRMIKGG--ILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
G+ + G + + ++ ++LRG S G G+ + + +M G+ D Y+ + C
Sbjct: 176 GKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMC 235
Query: 127 DIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAV 186
G+ A L+ E+ D + +I + V +F +M + GC P+
Sbjct: 236 KSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVA 295
Query: 187 TFNALINGLCKAGKLDEAHLLFYKM-EIGKSPS------LFFRLAQGSDHVSDSVSLQKK 239
T N +I LC+ G++ +A+ + +M + G P LF RL + S+ +S
Sbjct: 296 THNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEILS-------- 347
Query: 240 VEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGL 299
L ++ SGV P + TY +L+ F + G + ++K ++ G
Sbjct: 348 ---------------LFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGD 392
Query: 300 SPDSVTYGTLIDGL 313
+PDS Y +ID L
Sbjct: 393 TPDSAAYNAVIDAL 406
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 3/135 (2%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
+ ++AT N ++ C+ G++ +A +L + + G Y L F + + +E S
Sbjct: 291 EPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCL---FSRLEKPSEILS 347
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
L+GRMI+ G+ P + Y +++R G + + ++ M + G PD+ YNA+I
Sbjct: 348 LFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALI 407
Query: 127 DIGQLDHARSLHVEI 141
G LD AR E+
Sbjct: 408 QKGMLDMAREYEEEM 422
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 105/221 (47%), Gaps = 4/221 (1%)
Query: 8 RDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSL 67
+DL ++++ ++ CK GK +AV L + ++ + + Y+++I ++ +
Sbjct: 222 KDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRV 281
Query: 68 YGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCD 127
+ M + G P+V + +++ L +GR+ +A +M EM +RG PD+ Y + F
Sbjct: 282 FREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCL---FSR 338
Query: 128 IGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVT 187
+ + SL + T+ +L+ + + G ++ ++ M++ G P +
Sbjct: 339 LEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAA 398
Query: 188 FNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGS 227
+NA+I+ L + G LD A +M E G SP L + S
Sbjct: 399 YNAVIDALIQKGMLDMAREYEEEMIERGLSPRRRPELVEKS 439
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 98/226 (43%), Gaps = 21/226 (9%)
Query: 146 GLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG---CFPSAVTFNALINGLCKAGKLD 202
L D + L+ +C+ V EA+E+ +G + N ++ G K G
Sbjct: 147 NLRDETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWG 206
Query: 203 EAHLLFYKMEI-GKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLAD 261
+ + KM+ G + LF S ++ MC++G+ A KL ++
Sbjct: 207 KCKEYWKKMDTEGVTKDLF--------------SYSIYMDIMCKSGKPWKAVKLYKEMKS 252
Query: 262 SGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREED 321
+ D+ YN +I + + + ++F++++ +G P+ T+ T+I L R D
Sbjct: 253 RRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRD 312
Query: 322 AFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKS 367
A+++ D M K C+P Y L + R +K S SL+ ++S
Sbjct: 313 AYRMLDEMPKRGCQPDSITYMCLFS---RLEKPSEILSLFGRMIRS 355
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 85/168 (50%)
Query: 11 ATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGR 70
++F ++++GF + K +E +L +++ G I +S Y+ I K ++ EA +L
Sbjct: 223 SSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDG 282
Query: 71 MIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQ 130
M+ G+ P+ + Y+ ++ G NE EA K+F M+ RG PD+ CY +I C G
Sbjct: 283 MLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGD 342
Query: 131 LDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEK 178
+ A SL E + + L+ + K V EA+E+ Q+++
Sbjct: 343 FETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKE 390
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 92/206 (44%)
Query: 3 MRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYN 62
M + DL T+N ++ FC+ G + S++ +ER G S + +I GF+ + +
Sbjct: 180 MYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSD 239
Query: 63 EAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAII 122
E + M G+ V Y I ++ L + EA + M+ G+ P+ Y+ +I
Sbjct: 240 EVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLI 299
Query: 123 KGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCF 182
GFC+ + A+ L + D+ + LI +CK G A + + +
Sbjct: 300 HGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWV 359
Query: 183 PSAVTFNALINGLCKAGKLDEAHLLF 208
PS +L+NGL K K++EA L
Sbjct: 360 PSFSIMKSLVNGLAKDSKVEEAKELI 385
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 140/319 (43%), Gaps = 33/319 (10%)
Query: 45 LSGYSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFA 104
S S+L+DGF + R ++ I +LYA + ++++F
Sbjct: 96 FSAVSNLLDGFIENRPDLKSERFAAHAI--------VLYA-------QANMLDHSLRVFR 140
Query: 105 EMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLH-DTCTHTILICEMCKK 163
++ + + NA++ A+ +++E+ G+ D T+ +I C+
Sbjct: 141 DLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCES 200
Query: 164 GMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRL 223
G + + +ME+ G P++ +F +I+G K DE +GK L
Sbjct: 201 GSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDE---------VGKV------L 245
Query: 224 AQGSDH-VSDSVSLQK-KVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKA 281
A D V+ VS +++ +C+ ++ A LL + +G+ P+ TY+ LI+ FC
Sbjct: 246 AMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNE 305
Query: 282 GNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVY 341
+ A KLFK + +G PDS Y TLI L + E A + ++ PSF++
Sbjct: 306 DDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIM 365
Query: 342 KALMTWLCRGKKISLAFSL 360
K+L+ L + K+ A L
Sbjct: 366 KSLVNGLAKDSKVEEAKEL 384
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 116/280 (41%), Gaps = 16/280 (5%)
Query: 20 FCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKG-GILP 78
+ + L+ ++ + R LE+ + ++L+ A+ Y EA +Y M K GI P
Sbjct: 126 YAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEP 185
Query: 79 DVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLH 138
D+ Y M++ G + + AEM ++G+ P++ + +I GF + D +
Sbjct: 186 DLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVL 245
Query: 139 VEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKA 198
+ T+ I I +CK+ +EA+ + + M G P+ VT++ LI+G C
Sbjct: 246 AMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNE 305
Query: 199 GKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLT 257
+EA LF M G P DS + ++C+ G A L
Sbjct: 306 DDFEEAKKLFKIMVNRGCKP--------------DSECYFTLIYYLCKGGDFETALSLCK 351
Query: 258 QLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLK 297
+ + VP L+N K + A +L ++ K
Sbjct: 352 ESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEK 391
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 24/206 (11%)
Query: 167 REAQEMFNQMEKL-GCFPSAVTFNALINGLCKAGKLDEAHLLFYKME---IGKSPSLFFR 222
+EA+ ++ +M K+ G P T+N +I C++G ++ + +ME I + S F
Sbjct: 168 KEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGL 227
Query: 223 LAQG--SDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCK 280
+ G ++ SD V K+L + D GV + TYNI I S CK
Sbjct: 228 MISGFYAEDKSDEVG------------------KVLAMMKDRGVNIGVSTYNIRIQSLCK 269
Query: 281 AGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAV 340
A L + G+ P++VTY LI G + E+A K+ M+ C+P
Sbjct: 270 RKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSEC 329
Query: 341 YKALMTWLCRGKKISLAFSLYLEYLK 366
Y L+ +LC+G A SL E ++
Sbjct: 330 YFTLIYYLCKGGDFETALSLCKESME 355
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 98/213 (46%), Gaps = 3/213 (1%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D ++ +L+ +C G E+A+ ++R ++ G + +++++ +K A +L+
Sbjct: 173 DKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLW 232
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVK-MFAEMIQRGLLPDAHCYNAIIKGFCD 127
M+K G D Y + R +S + E VK + EM GL PD YN ++ +C+
Sbjct: 233 NEMVKKGCELDNAAYNV--RIMSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCE 290
Query: 128 IGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVT 187
G LD A+ ++ + G++ + T LI +C + + +F + + P T
Sbjct: 291 RGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNT 350
Query: 188 FNALINGLCKAGKLDEAHLLFYKMEIGKSPSLF 220
L+ GL + K D+A L ++ PS
Sbjct: 351 LKHLVVGLVENKKRDDAKGLIRTVKKKFPPSFL 383
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 138/327 (42%), Gaps = 16/327 (4%)
Query: 57 KARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAH 116
K RR+++ +L + + Y+ ++R A++ F +M Q G A
Sbjct: 79 KCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAV 138
Query: 117 CYNAIIKGFCDIGQLDHARSLHVEISGHDG--LHDTCTHTILICEMCKKGMVREAQEMFN 174
+NA++ D L EI + D ++ ILI C G +A E+
Sbjct: 139 SFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMR 198
Query: 175 QMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSV 234
QM+ G + + F +++ L K G+L+ A L+ +M + K L D+ + +V
Sbjct: 199 QMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEM-VKKGCEL--------DNAAYNV 249
Query: 235 SLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDL 294
+ + E +L+ +++ G+ PD +YN L+ ++C+ G ++ A K+++ L
Sbjct: 250 RIMSAQKESPE-----RVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGL 304
Query: 295 QLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKI 354
+ +P++ T+ TLI L E + I + P F K L+ L KK
Sbjct: 305 EGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKR 364
Query: 355 SLAFSLYLEYLKSLPGRDNDSINALEE 381
A L K P ++ LEE
Sbjct: 365 DDAKGLIRTVKKKFPPSFLNAWKKLEE 391
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 113/317 (35%), Gaps = 81/317 (25%)
Query: 153 HTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKME 212
++ LI + M A F QM++ G SAV+FNAL+N + D
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFD---------- 154
Query: 213 IGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYN 272
K P LF + Q + + +PD +Y
Sbjct: 155 --KVPQLFDEIPQRYNKI----------------------------------IPDKISYG 178
Query: 273 ILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKH 332
ILI S+C +G A ++ + +Q KG+ ++ + T++ LY+ E A + + M+K
Sbjct: 179 ILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKK 238
Query: 333 VCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEVERAI 392
CE A Y + + K P R + I + +K +
Sbjct: 239 GCELDNAAYNVRI----------------MSAQKESPERVKELIEEMSSMGLKPDT---- 278
Query: 393 RGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGL 452
Y+ L+ +C+ +DEA ++ L+ N N + LI L
Sbjct: 279 ---------------ISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHL 323
Query: 453 CAKRNLYDAVVIFLYSL 469
C R IF S+
Sbjct: 324 CYSRLYEQGYAIFKKSV 340
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 91/457 (19%), Positives = 197/457 (43%), Gaps = 37/457 (8%)
Query: 26 LEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAI 85
L A+S+ + ++ I ++++ G + A LY MI G+LP+ +
Sbjct: 84 LPYAISVFKTIQEPNLLI----WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPF 139
Query: 86 MLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHD 145
+L+ + E ++ +++ G D + + ++I + G+L+ A + + S H
Sbjct: 140 VLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKV-FDKSPH- 197
Query: 146 GLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAH 205
D ++T LI +G + AQ++F+++ V++NA+I+G + G EA
Sbjct: 198 --RDVVSYTALIKGYASRGYIENAQKLFDEIP----VKDVVSWNAMISGYAETGNYKEAL 251
Query: 206 LLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVV 265
LF M ++ D ++ V ++G ++ + D G
Sbjct: 252 ELFKDM-------------MKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFG 298
Query: 266 PDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKI 325
++K N LI+ + K G + A LF+ L K D +++ TLI G + ++A +
Sbjct: 299 SNLKIVNALIDLYSKCGELETACGLFERLPYK----DVISWNTLIGGYTHMNLYKEALLL 354
Query: 326 RDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDS---INALEEY 382
ML+ P+ +++ I + +++ K L G N S + ++ Y
Sbjct: 355 FQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMY 414
Query: 383 FMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININP 442
G++E A + + + +L+ ++ ++ GF + D + +FS + + I +
Sbjct: 415 AKCGDIEAAHQVFNSILHK----SLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDD 470
Query: 443 TSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKI 479
+ V L+S C+ + D ++ + +++ PK+
Sbjct: 471 ITFVGLLSA-CSHSGMLDLGRHIFRTMTQDYKMTPKL 506
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 138/329 (41%), Gaps = 42/329 (12%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLL-RLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSL 67
DL L++ + + G+LE+A + + RD + Y++LI G+ A L
Sbjct: 168 DLYVHTSLISMYVQNGRLEDAHKVFDKSPHRD-----VVSYTALIKGYASRGYIENAQKL 222
Query: 68 YGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCD 127
+ + + DV+ + M+ G + G EA+++F +M++ + PD ++
Sbjct: 223 FDEIP----VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ 278
Query: 128 IGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVT 187
G ++ R +H+ I H + LI K G + A +F ++ + ++
Sbjct: 279 SGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLP----YKDVIS 334
Query: 188 FNALINGLCKAGKLDEAHLLFYKM-EIGKSPS--LFFRLAQGSDH--------------- 229
+N LI G EA LLF +M G++P+ + H
Sbjct: 335 WNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYID 394
Query: 230 -----VSDSVSLQKKVEHM-CEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGN 283
V+++ SL+ + M + G A+ Q+ +S + + ++N +I F G
Sbjct: 395 KRLKGVTNASSLRTSLIDMYAKCGDIEAAH----QVFNSILHKSLSSWNAMIFGFAMHGR 450
Query: 284 MNGAFKLFKDLQLKGLSPDSVTYGTLIDG 312
+ +F LF ++ G+ PD +T+ L+
Sbjct: 451 ADASFDLFSRMRKIGIQPDDITFVGLLSA 479
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 95/210 (45%), Gaps = 14/210 (6%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLL-RLLERDGRGIRLSGYSSLIDGFFKARRYNEA 64
F +L N L++ + K G+LE A L RL +D + +++LI G+ Y EA
Sbjct: 297 FGSNLKIVNALIDLYSKCGELETACGLFERLPYKD-----VISWNTLIGGYTHMNLYKEA 351
Query: 65 HSLYGRMIKGGILPDVILYAIMLRGLSNEGRV--GEAVKMFAEMIQRGLLPDAHCYNAII 122
L+ M++ G P+ + +L ++ G + G + ++ + +G+ + ++I
Sbjct: 352 LLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLI 411
Query: 123 KGFCDIGQLDHARSLHVEISGHDGLHDT-CTHTILICEMCKKGMVREAQEMFNQMEKLGC 181
+ G ++ A + I LH + + +I G + ++F++M K+G
Sbjct: 412 DMYAKCGDIEAAHQVFNSI-----LHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGI 466
Query: 182 FPSAVTFNALINGLCKAGKLDEAHLLFYKM 211
P +TF L++ +G LD +F M
Sbjct: 467 QPDDITFVGLLSACSHSGMLDLGRHIFRTM 496
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 128/294 (43%), Gaps = 19/294 (6%)
Query: 12 TFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRM 71
+N ++ K KLE A + + G I Y++L+ F +A +Y M
Sbjct: 245 AYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESM 304
Query: 72 IKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQL 131
K L D Y +++ L+ GR+ A K+F +M +R L P +++++ G+L
Sbjct: 305 EKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRL 364
Query: 132 DHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNAL 191
D + +++E+ G LI K G + A ++++M+K G P+ + +
Sbjct: 365 DTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMI 424
Query: 192 INGLCKAGKLDEAHLLFYKMEIG---KSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQ 248
I K+GKL+ A +F ME +PS + L +E +GQ
Sbjct: 425 IESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCL----------------LEMHAGSGQ 468
Query: 249 TLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPD 302
+A K+ + ++G+ P + +Y L+ ++ A K+ +++ G S D
Sbjct: 469 VDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVD 522
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 124/321 (38%), Gaps = 48/321 (14%)
Query: 43 IRLSGYSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKM 102
+ + Y+ +I KA + A + + + G D Y ++ N+G +A ++
Sbjct: 241 LSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEI 300
Query: 103 FAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCK 162
+ M + L D Y II G+LD A L ++ + L+ M K
Sbjct: 301 YESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGK 360
Query: 163 KGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFR 222
G + + +++ +M+ G PSA F +LI+ KAGKLD A
Sbjct: 361 AGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTA------------------ 402
Query: 223 LAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAG 282
+L ++ SG P+ Y ++I S K+G
Sbjct: 403 ------------------------------LRLWDEMKKSGFRPNFGLYTMIIESHAKSG 432
Query: 283 NMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYK 342
+ A +FKD++ G P TY L++ + + A KI + M P + Y
Sbjct: 433 KLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYI 492
Query: 343 ALMTWLCRGKKISLAFSLYLE 363
+L+T L + + +A + LE
Sbjct: 493 SLLTLLANKRLVDVAGKILLE 513
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 169/405 (41%), Gaps = 35/405 (8%)
Query: 77 LPDVILYAIMLRGLSNEGRVGEAVK-MFAEMIQRGLLPDAH------CYNAIIKGFCDIG 129
LP Y ++ GL N+GR ++ +F EM+Q +H YN +I+
Sbjct: 202 LPSDECYVVLFDGL-NQGRDFVGIQSLFEEMVQDS---SSHGDLSFNAYNQVIQYLAKAE 257
Query: 130 QLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFN 189
+L+ A + DT T+ L+ KG+ +A E++ MEK T+
Sbjct: 258 KLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYE 317
Query: 190 ALINGLCKAGKLDEAHLLFYKME---IGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEA 246
+I L K+G+LD A LF +M+ + S S+F L V+ M +A
Sbjct: 318 LIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSL----------------VDSMGKA 361
Query: 247 GQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTY 306
G+ + K+ ++ G P + LI+S+ KAG ++ A +L+ +++ G P+ Y
Sbjct: 362 GRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLY 421
Query: 307 GTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLK 366
+I+ + + E A + M K P+ + Y L+ ++ A +Y
Sbjct: 422 TMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTN 481
Query: 367 S--LPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVD 424
+ PG + I+ L K V+ A + LLE+ ++ +L+I + + VD
Sbjct: 482 AGLRPGL-SSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLMI-YIKDASVD 539
Query: 425 EALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSL 469
AL + I N L C K LYD+ L +L
Sbjct: 540 LALKWLRFMGSSGIKTNNFIIRQLFES-CMKNGLYDSARPLLETL 583
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 96/203 (47%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D T+N L+ F +G +A + +E+ + S Y +I K+ R + A L+
Sbjct: 277 DTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLF 336
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
+M + + P +++ ++ + GR+ ++K++ EM G P A + ++I +
Sbjct: 337 QQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKA 396
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
G+LD A L E+ + +T++I K G + A +F MEK G P+ T+
Sbjct: 397 GKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTY 456
Query: 189 NALINGLCKAGKLDEAHLLFYKM 211
+ L+ +G++D A ++ M
Sbjct: 457 SCLLEMHAGSGQVDSAMKIYNSM 479
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 137/316 (43%), Gaps = 22/316 (6%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D +T+ +++ K G+L+ A L + ++ S +SSL+D KA R + + +Y
Sbjct: 312 DGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVY 371
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
M G P ++ ++ + G++ A++++ EM + G P+ Y II+
Sbjct: 372 MEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKS 431
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
G+L+ A ++ ++ L T++ L+ G V A +++N M G P ++
Sbjct: 432 GKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSY 491
Query: 189 NALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQ 248
+L+ L +D A + +M+ A G + D + + ++ +A
Sbjct: 492 ISLLTLLANKRLVDVAGKILLEMK-----------AMG--YSVDVCASDVLMIYIKDASV 538
Query: 249 TLNAYKLLTQLADSGVVPDIKTYNILI----NSFCKAGNMNGAFKLFKDLQLKGLSPDSV 304
L A K L + SG IKT N +I S K G + A L + L D V
Sbjct: 539 DL-ALKWLRFMGSSG----IKTNNFIIRQLFESCMKNGLYDSARPLLETLVHSAGKVDLV 593
Query: 305 TYGTLIDGLYRVEREE 320
Y +++ L R + E+
Sbjct: 594 LYTSILAHLVRCQDED 609
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 90/179 (50%), Gaps = 4/179 (2%)
Query: 4 RRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSG--YSSLIDGFFKARRY 61
R+ + + F+ L++ K G+L+ ++ + +E G G R S + SLID + KA +
Sbjct: 342 RKLRPSFSVFSSLVDSMGKAGRLDTSMKVY--MEMQGFGHRPSATMFVSLIDSYAKAGKL 399
Query: 62 NEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAI 121
+ A L+ M K G P+ LY +++ + G++ A+ +F +M + G LP Y+ +
Sbjct: 400 DTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCL 459
Query: 122 IKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
++ GQ+D A ++ ++ ++ L+ + K +V A ++ +M+ +G
Sbjct: 460 LEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMG 518
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 147/333 (44%), Gaps = 27/333 (8%)
Query: 13 FNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMI 72
N L++ + + G +E A L+ +R + +++ G+++L+DG+ K N+A +++ +
Sbjct: 317 LNALISMYSRCGGVETARRLIE--QRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLK 374
Query: 73 KGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLD 132
DV+ + M+ G G GEA+ +F M+ G P+++ A++ + L
Sbjct: 375 D----RDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLS 430
Query: 133 HARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALI 192
H + +H ++ LI K G + A F+ + C V++ ++I
Sbjct: 431 HGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIR---CERDTVSWTSMI 487
Query: 193 NGLCKAGKLDEAHLLFYKMEI-GKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLN 251
L + G +EA LF M + G P DH++ V + H Q
Sbjct: 488 IALAQHGHAEEALELFETMLMEGLRP----------DHIT-YVGVFSACTHAGLVNQGRQ 536
Query: 252 AYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLID 311
+ ++ + ++P + Y +++ F +AG + A + + + ++ PD VT+G+L+
Sbjct: 537 YFDMMKDV--DKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIE---PDVVTWGSLLS 591
Query: 312 GLYRVEREEDAFKIRDHMLKHVCEPSFAVYKAL 344
RV + D K+ L + + Y AL
Sbjct: 592 AC-RVHKNIDLGKVAAERLLLLEPENSGAYSAL 623
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/386 (21%), Positives = 153/386 (39%), Gaps = 36/386 (9%)
Query: 64 AHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIK 123
A ++ R+IK G++ V L ++ S G A K+F EM R A +N ++
Sbjct: 33 AQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLR----TAFSWNTVLS 88
Query: 124 GFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFP 183
+ G +D ++ D+ + T +I G +A + M K G P
Sbjct: 89 AYSKRGDMDSTCEFFDQLPQ----RDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEP 144
Query: 184 SAVTFNALINGLCKAGKLD---EAHLLFYKM----EIGKSPSLFFRLAQGSDH------- 229
+ T ++ + ++ + H K+ + S SL A+ D
Sbjct: 145 TQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVF 204
Query: 230 ----VSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMN 285
V D S + + GQ A Q+A+ DI T+N +I+ F + G
Sbjct: 205 DRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAER----DIVTWNSMISGFNQRGYDL 260
Query: 286 GAFKLF-KDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKAL 344
A +F K L+ LSPD T +++ +E+ +I H++ + S V AL
Sbjct: 261 RALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNAL 320
Query: 345 MTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFRD 404
++ R + A L +E + + L+ Y G++ +A + L +D
Sbjct: 321 ISMYSRCGGVETARRL-IEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSL----KD 375
Query: 405 FNLAPYSILLIGFCQAKKVDEALIIF 430
++ ++ +++G+ Q EA+ +F
Sbjct: 376 RDVVAWTAMIVGYEQHGSYGEAINLF 401
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 8/211 (3%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
+R+ T+NV++ G G E+A+ L + + ++++IDG+ + + EA
Sbjct: 186 ERNPVTWNVMITGLTNLGDFEKALCFLEKMPNR----TVVSWTTIIDGYARVDKPKEAIL 241
Query: 67 LYGRMIK-GGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLP-DAHCYNAIIKG 124
L+ RM+ I P+ I +L + N G + + A + +RG +P D N++I
Sbjct: 242 LFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDA 301
Query: 125 FCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPS 184
+ G + A +EI +G + + T +I GM +EA MF ME+LG P+
Sbjct: 302 YAKCGCIQSAFKFFIEIP--NGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPN 359
Query: 185 AVTFNALINGLCKAGKLDEAHLLFYKMEIGK 215
VT +++N G +E L F+ + +
Sbjct: 360 RVTMISVLNACSHGGLAEEEFLEFFNTMVNE 390
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 142/311 (45%), Gaps = 33/311 (10%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
++DL FN +++G+ + +EA++L++ ++ G + +++LI GF R +
Sbjct: 180 EQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSE 239
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
+ M G PDV+ + ++ GL + + +A F +M+ GL P++ ++
Sbjct: 240 ILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACT 299
Query: 127 DIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKK-GMVREAQEMFNQMEKLGCFPSA 185
+ + H + +H S GL D + +M K G + EA +F + K +
Sbjct: 300 TLAYMKHGKEIH-GYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPK----KTT 354
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQK-KVEHMC 244
VTFN++I G D+A LF +ME + DH++ + L +
Sbjct: 355 VTFNSMIFCYANHGLADKAVELFDQME---------ATGEKLDHLTFTAILTACSHAGLT 405
Query: 245 EAGQTL-----NAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGL 299
+ GQ L N Y+ +VP ++ Y +++ +AG + A+++ K ++++
Sbjct: 406 DLGQNLFLLMQNKYR---------IVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRME-- 454
Query: 300 SPDSVTYGTLI 310
PD +G L+
Sbjct: 455 -PDLFVWGALL 464
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 139/309 (44%), Gaps = 31/309 (10%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
+RD++ V++ + G +E++ R + +D G++L + ++ KA R N
Sbjct: 79 KRDISGCVVMIGACARNGYYQESLDFFREMYKD--GLKLDAF--IVPSLLKASR-NLLDR 133
Query: 67 LYGRMIKGGIL-----PDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAI 121
+G+MI +L D + + ++ S G VG A K+F+++ ++ L+ +NA+
Sbjct: 134 EFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLV----VFNAM 189
Query: 122 IKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGC 181
I G+ + Q D A +L ++ D T LI + E+ M G
Sbjct: 190 ISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGY 249
Query: 182 FPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVE 241
P V++ ++I+GL + ++A F +M L L S + + +
Sbjct: 250 KPDVVSWTSIISGLVHNFQNEKAFDAFKQM-------LTHGLYPNSATIITLLPACTTLA 302
Query: 242 HMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSP 301
+M + G+ ++ Y ++T L D G V + L++ + K G ++ A LF+ K
Sbjct: 303 YM-KHGKEIHGYSVVTGLEDHGFVR-----SALLDMYGKCGFISEAMILFR----KTPKK 352
Query: 302 DSVTYGTLI 310
+VT+ ++I
Sbjct: 353 TTVTFNSMI 361
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 122/314 (38%), Gaps = 23/314 (7%)
Query: 33 LRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSN 92
L ++ R + + Y LI+ + R + L+ ++ GI + A ++
Sbjct: 4 LTIVPSSFRLLSIGSYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVE 63
Query: 93 EGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCT 152
G+V +A K+F EM +R + A + LD R ++ DGL
Sbjct: 64 CGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMY-----KDGLKLDAF 118
Query: 153 HTILICEMCKKGMVREAQEMFNQME-KLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM 211
+ + + + RE +M + + K A ++LI+ K G
Sbjct: 119 IVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFG------------ 166
Query: 212 EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTY 271
E+G + +F L + D V + Q A L+ + G+ PD+ T+
Sbjct: 167 EVGNARKVFSDLGE-----QDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITW 221
Query: 272 NILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLK 331
N LI+ F N ++ + + L G PD V++ ++I GL + E AF ML
Sbjct: 222 NALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLT 281
Query: 332 HVCEPSFAVYKALM 345
H P+ A L+
Sbjct: 282 HGLYPNSATIITLL 295
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 73/142 (51%)
Query: 71 MIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQ 130
M++ I P I Y M+ G + RV +A +M M +G PD ++ +I G+C +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 131 LDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNA 190
+D+ + E+ + +T T+T LI C+ G + AQ++ N+M G P +TF+
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 191 LINGLCKAGKLDEAHLLFYKME 212
++ GLC +L +A + ++
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQ 142
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 78/157 (49%), Gaps = 15/157 (9%)
Query: 176 MEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSV 234
M + FP+ +T+N++I+G CK ++D+A + M G SP D V
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSP--------------DVV 46
Query: 235 SLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDL 294
+ + C+A + N ++ ++ G+V + TY LI+ FC+ G+++ A L ++
Sbjct: 47 TFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEM 106
Query: 295 QLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLK 331
G++PD +T+ ++ GL + AF I + + K
Sbjct: 107 ISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 143
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 67/123 (54%)
Query: 12 TFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRM 71
T+N +++GFCKQ ++++A +L + G + +S+LI+G+ KA+R + ++ M
Sbjct: 12 TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 71
Query: 72 IKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQL 131
+ GI+ + + Y ++ G G + A + EMI G+ PD ++ ++ G C +L
Sbjct: 72 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKEL 131
Query: 132 DHA 134
A
Sbjct: 132 RKA 134
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 73/135 (54%)
Query: 233 SVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFK 292
+++ ++ C+ + +A ++L +A G PD+ T++ LIN +CKA ++ ++F
Sbjct: 10 TITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFC 69
Query: 293 DLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGK 352
++ +G+ ++VTY TLI G +V + A + + M+ P + + ++ LC K
Sbjct: 70 EMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKK 129
Query: 353 KISLAFSLYLEYLKS 367
++ AF++ + KS
Sbjct: 130 ELRKAFAILEDLQKS 144
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D+ TF+ L+NG+CK +++ + + + R G Y++LI GF + + A L
Sbjct: 44 DVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLL 103
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEM 106
MI G+ PD I + ML GL ++ + +A + ++
Sbjct: 104 NEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 141
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%)
Query: 263 GVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDA 322
+ P TYN +I+ FCK ++ A ++ + KG SPD VT+ TLI+G + +R ++
Sbjct: 5 SIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNG 64
Query: 323 FKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYL 365
+I M + + Y L+ C+ + A L E +
Sbjct: 65 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMI 107
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/388 (20%), Positives = 154/388 (39%), Gaps = 73/388 (18%)
Query: 4 RRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERD----------------------GR 41
R Q+D +NV+LNG+ K G L+ + ++ D
Sbjct: 198 RVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDL 257
Query: 42 GIRLSGY-------------SSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLR 88
G++L G +SL+ + K R+++A L+ M + D + + M+
Sbjct: 258 GVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRA----DTVTWNCMIS 313
Query: 89 GLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLH 148
G G + E++ F EMI G+LPDA +++++ L++ + +H I H
Sbjct: 314 GYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISL 373
Query: 149 DTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAG-KLDEAHLL 207
D + LI K V AQ +F+Q + V F A+I+G G +D +
Sbjct: 374 DIFLTSALIDAYFKCRGVSMAQNIFSQCNSV----DVVVFTAMISGYLHNGLYIDSLEMF 429
Query: 208 FYKMEIGKSPS------------LFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLN---- 251
+ +++ SP+ + L G + ++K ++ C G +
Sbjct: 430 RWLVKVKISPNEITLVSILPVIGILLALKLGREL--HGFIIKKGFDNRCNIGCAVIDMYA 487
Query: 252 -------AYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSV 304
AY++ +L+ DI ++N +I ++ N + A +F+ + + G+ D V
Sbjct: 488 KCGRMNLAYEIFERLSKR----DIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCV 543
Query: 305 TYGTLIDGLYRVEREEDAFKIRDHMLKH 332
+ + + E I M+KH
Sbjct: 544 SISAALSACANLPSESFGKAIHGFMIKH 571
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/349 (20%), Positives = 147/349 (42%), Gaps = 37/349 (10%)
Query: 50 SLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQR 109
++ID + K R N A+ ++ R+ K D++ + M+ + A+ +F +M
Sbjct: 481 AVIDMYAKCGRMNLAYEIFERLSKR----DIVSWNSMITRCAQSDNPSAAIDIFRQMGVS 536
Query: 110 GLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREA 169
G+ D +A + ++ +++H + H D + + LI K G ++ A
Sbjct: 537 GICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAA 596
Query: 170 QEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDH 229
+F M++ + V++N++I GKL ++ LF++M + S
Sbjct: 597 MNVFKTMKE----KNIVSWNSIIAACGNHGKLKDSLCLFHEM------------VEKSGI 640
Query: 230 VSDSVSLQKKVEHMCEAGQTLNAYKLLTQLA-DSGVVPDIKTYNILINSFCKAGNMNGAF 288
D ++ + + C G + + D G+ P + Y +++ F +AG + A+
Sbjct: 641 RPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAY 700
Query: 289 KLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMT-- 346
+ K + PD+ +GTL+ G R+ + + ++ L + +PS + Y L++
Sbjct: 701 ETVKSMPFP---PDAGVWGTLL-GACRLHKNVELAEVASSKLMDL-DPSNSGYYVLISNA 755
Query: 347 ------WLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEVE 389
W K SL + ++ +PG IN F+ G+V
Sbjct: 756 HANAREWESVTKVRSL---MKEREVQKIPGYSWIEINKRTHLFVSGDVN 801
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/325 (18%), Positives = 147/325 (45%), Gaps = 25/325 (7%)
Query: 39 DGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGE 98
D R + ++S+I F + N+A + Y +M+ G+ PDV + +++ +
Sbjct: 97 DLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNF-K 155
Query: 99 AVKMFAEMIQR-GLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILI 157
+ ++ + G+ + +++IK + + G++D L + D + +++
Sbjct: 156 GIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCV----IWNVML 211
Query: 158 CEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSP 217
K G + + F+ M P+AVTF+ +++ +C + L + + + + +
Sbjct: 212 NGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLS-VCASKLLIDLGVQLHGLVV---- 266
Query: 218 SLFFRLAQGSDHVSDSVSLQKKVEHM-CEAGQTLNAYKLLTQLADSGVVPDIKTYNILIN 276
G D S++ + M + G+ +A KL ++ + D T+N +I+
Sbjct: 267 ------VSGVDFEG---SIKNSLLSMYSKCGRFDDASKLFRMMSRA----DTVTWNCMIS 313
Query: 277 SFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEP 336
+ ++G M + F ++ G+ PD++T+ +L+ + + E E +I ++++H
Sbjct: 314 GYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISL 373
Query: 337 SFAVYKALMTWLCRGKKISLAFSLY 361
+ AL+ + + +S+A +++
Sbjct: 374 DIFLTSALIDAYFKCRGVSMAQNIF 398
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/336 (20%), Positives = 146/336 (43%), Gaps = 29/336 (8%)
Query: 2 WMRRFQ----RDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFK 57
W +RF ++ ++ + ++G L EA + + + + Y+ +I +
Sbjct: 459 WFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVIE-YNVMIKAYGI 517
Query: 58 ARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHC 117
++ +A L+ M+ G+ PD Y +++ L++ + +M + G + D
Sbjct: 518 SKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIP 577
Query: 118 YNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQME 177
Y A+I F +GQL+ A ++ E+ ++ D + +LI G V++A M+
Sbjct: 578 YCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMK 637
Query: 178 KLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM----EIGKSPSLFF-----------R 222
+ G ++V +N+LI K G LDEA ++ K+ + P ++
Sbjct: 638 EAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERS 697
Query: 223 LAQGSDHVSDSVSLQKKVEHMCEA---------GQTLNAYKLLTQLADSGVVPDIKTYNI 273
+ + ++ + DS+ + + A G+ A ++ Q+ + ++ D +YN
Sbjct: 698 MVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNS 757
Query: 274 LINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTL 309
++ F G A + FK++ G+ PD T+ +L
Sbjct: 758 VLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSL 793
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 107/557 (19%), Positives = 217/557 (38%), Gaps = 92/557 (16%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRG----IRLSGYS--SLIDGFFKAR 59
Q D T ++L + K + ++A + D + LS Y+ ++ID + K+
Sbjct: 253 MQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSG 312
Query: 60 RYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKM----------------- 102
+ EA + RM++ GI+P + + M+ N G++GE +
Sbjct: 313 QIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHCAPDTRTYNI 372
Query: 103 -----------------FAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHD 145
F EM GL PD Y ++ F ++ A L E+ +
Sbjct: 373 LISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDN 432
Query: 146 GLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAH 205
D T + L + M+ ++ F + G S+ ++A I+ + G L EA
Sbjct: 433 VEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNM-SSEGYSANIDAYGERGYLSEAE 491
Query: 206 LLFY-KMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKL--------- 255
+F E+ K + + + + + + K E CE +++ +Y +
Sbjct: 492 RVFICCQEVNKRTVIEYNV------MIKAYGISKSCEKACELFESMMSYGVTPDKCTYNT 545
Query: 256 -----------------LTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKG 298
L ++ ++G V D Y +I+SF K G +N A +++K++
Sbjct: 546 LVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYN 605
Query: 299 LSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAF 358
+ PD V YG LI+ + A + M + + +Y +L+ + + A
Sbjct: 606 IEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAE 665
Query: 359 SLYLEYLKSLPGR---DNDSINALEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLI 415
++Y + L+S D + N + + + + R + + + + N ++++L
Sbjct: 666 AIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLC 725
Query: 416 GFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKGFEL 475
+ + + +EA I + E I +P S Y++ V+ L++LD F+
Sbjct: 726 MYKKNGRFEEATQIAKQMREMKILTDPLS--------------YNS-VLGLFALDGRFKE 770
Query: 476 GPKICKELLECLLVSQD 492
+ KE++ + D
Sbjct: 771 AVETFKEMVSSGIQPDD 787
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 126/319 (39%), Gaps = 67/319 (21%)
Query: 22 KQGKLEEAVSLLRLLERDG-RGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKGGILPDV 80
+Q E AV + + G + + Y+ ++ KA ++ SL+ MI+ GI P
Sbjct: 163 EQIHWERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPIN 222
Query: 81 ILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVE 140
Y ++ S G A+ +M + G+ PD +++ + + A +
Sbjct: 223 STYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKK 282
Query: 141 ISGHDGLHDT--C----THTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALING 194
S + D+ C T+ +I K G ++EA E F +M + G P+ VTFN +I+
Sbjct: 283 WSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHI 342
Query: 195 LCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYK 254
G+L E SL K ++ C
Sbjct: 343 YGNNGQLGEV-----------------------------TSLMKTMKLHC---------- 363
Query: 255 LLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLY 314
PD +TYNILI+ K ++ A FK+++ GL PD V+Y TL LY
Sbjct: 364 ----------APDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTL---LY 410
Query: 315 RVEREEDAFKIRDHMLKHV 333
AF IR HM++
Sbjct: 411 -------AFSIR-HMVEEA 421
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 149/358 (41%), Gaps = 47/358 (13%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLER-DGRGI-RLSG--YSSLIDGFFKARRYNEA 64
D+ ++N+LL C G+++ A + + +R + G+ +L Y ++I F A+ + A
Sbjct: 334 DMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWA 393
Query: 65 HSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKG 124
+ M G+ P+ ++ ++ +N G V +A +F EM+ G P++ C+N ++
Sbjct: 394 LKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHA 453
Query: 125 FCDIGQLDHA---------RSLHVEISGHDGLHDTCTHTILICEMCKKGMV--REAQEMF 173
+ Q D A S++ + D + T + I + G + R + +
Sbjct: 454 CVEACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPY 513
Query: 174 NQMEKLGCF-PSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSD 232
Q K CF P+ T+N L+ C L+ +G SP +
Sbjct: 514 IQASKRFCFKPTTATYNILLKA-CGTDYYRGKELMDEMKSLGLSP--------------N 558
Query: 233 SVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFK 292
++ ++ +G A ++L + +G PD+ Y I + + AF LF+
Sbjct: 559 QITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFE 618
Query: 293 DLQLKGLSPDSVTYGTLID---------------GLYRVEREEDAFKIRDHMLKHVCE 335
+++ + P+ VTY TL+ +Y+ R +K DH LK + E
Sbjct: 619 EMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRNA-GYKPNDHFLKELIE 675
>AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=1006
Length = 1006
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/388 (20%), Positives = 156/388 (40%), Gaps = 67/388 (17%)
Query: 2 WMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRY 61
W R + D+ +N +LN ++ + E A +L+ L++ G+ Y +++ +Y
Sbjct: 585 WDPRLEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKY 644
Query: 62 NEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAI 121
N H + +M K I P+ + Y +++ L EG+ EAV +M RG++ A Y +
Sbjct: 645 NLVHEFFRKMQKSSI-PNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDL 703
Query: 122 IKGFCDIGQLDHA------------RSLHVEISGHDGLHD----------------TCTH 153
+ C G+ + + + I D +H T+
Sbjct: 704 ARCLCSAGRCNEGLNMVNFVNPVVLKLIENLIYKADLVHTIQFQLKKICRVANKPLVVTY 763
Query: 154 TILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEI 213
T LI G ++ A +F+QM+K+ C P+ VT N ++ + G +EA LF KM
Sbjct: 764 TGLIQACVDSGNIKNAAYIFDQMKKV-CSPNLVTCNIMLKAYLQGGLFEEARELFQKM-- 820
Query: 214 GKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNI 273
++ +H+ +S + S V+PD T+N
Sbjct: 821 ----------SEDGNHIKNSSDFE------------------------SRVLPDTYTFNT 846
Query: 274 LINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLK-H 332
++++ + + ++++ G ++ + ++ R +EE +HM + +
Sbjct: 847 MLDTCAEQEKWDDFGYAYREMLRHGYHFNAKRHLRMVLEASRAGKEEVMEATWEHMRRSN 906
Query: 333 VCEPSFAVYKALMTWLCRGKKISLAFSL 360
PS + + L +G IS SL
Sbjct: 907 RIPPSPLIKERFFRKLEKGDHISAISSL 934
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 138/345 (40%), Gaps = 63/345 (18%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDG-------------------------- 40
+RD ++N +++G+ + G ++A+ L R +E +G
Sbjct: 195 ERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRL 254
Query: 41 -------RGIRLSGY--SSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLS 91
+ I LS + S LI + K + A ++ +MIK D + + M+ S
Sbjct: 255 LEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIK----KDRVAWTAMITVYS 310
Query: 92 NEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTC 151
G+ EA K+F EM + G+ PDA + ++ +G L+ + + S H+
Sbjct: 311 QNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIY 370
Query: 152 THTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM 211
T L+ K G V EA +F M + T+NA+I G EA LLF +M
Sbjct: 371 VATGLVDMYGKCGRVEEALRVFEAMP----VKNEATWNAMITAYAHQGHAKEALLLFDRM 426
Query: 212 EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADS-GVVPDIKT 270
+ S F + H AG + +++ G+VP I+
Sbjct: 427 SVPPSDITFIGVLSACVH----------------AGLVHQGCRYFHEMSSMFGLVPKIEH 470
Query: 271 YNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYR 315
Y +I+ +AG ++ A++ + K PD + ++ ++
Sbjct: 471 YTNIIDLLSRAGMLDEAWEFMERFPGK---PDEIMLAAILGACHK 512
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 152/361 (42%), Gaps = 33/361 (9%)
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
+ A SLY RM G+ PD Y + + +G + + + + GL D H ++
Sbjct: 113 HEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHS 172
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
+I + GQ+ +AR L EI+ DT + +I + G ++A ++F +ME+ G
Sbjct: 173 LIMMYAKCGQVGYARKLFDEITE----RDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEG 228
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKV 240
P T +++ G L LL +M I K L L S +S+ K
Sbjct: 229 FEPDERTLVSMLGACSHLGDLRTGRLL-EEMAITKKIGLSTFLG------SKLISMYGK- 280
Query: 241 EHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLS 300
G +A ++ Q+ + D + +I + + G + AFKLF +++ G+S
Sbjct: 281 -----CGDLDSARRVFNQM----IKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVS 331
Query: 301 PDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSL 360
PD+ T T++ V E +I H + + + V L+ + ++ A +
Sbjct: 332 PDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRV 391
Query: 361 YLEYLKSLPGRDNDSINAL-EEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQ 419
+ +++P ++ + NA+ Y +G + A+ F ++ P I IG
Sbjct: 392 F----EAMPVKNEATWNAMITAYAHQGHAKEAL-------LLFDRMSVPPSDITFIGVLS 440
Query: 420 A 420
A
Sbjct: 441 A 441
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 92/178 (51%), Gaps = 4/178 (2%)
Query: 137 LHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLC 196
L E+S + +T T+T LI + + G AQE+F +M G P +T+N L++GLC
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC 62
Query: 197 KAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLL 256
K GKL++A L+ K+E G L +V V+ + C+ G AY L
Sbjct: 63 KNGKLEKA-LVAGKVEDGWDLFCSLSLKGVKPNV---VTYTTMISGFCKKGFKEEAYTLF 118
Query: 257 TQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLY 314
++ + G +PD TYN LI + + G+ + +L K+++ + D+ TYG + D L+
Sbjct: 119 RKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLH 176
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 9/142 (6%)
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
L+ M + G++ + + Y +++GL G A ++F EM+ G+ PD YN ++ G C
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC 62
Query: 127 DIGQLDHA---------RSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQME 177
G+L+ A L +S + T+T +I CKKG EA +F +M+
Sbjct: 63 KNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMK 122
Query: 178 KLGCFPSAVTFNALINGLCKAG 199
+ G P + T+N LI + G
Sbjct: 123 EDGPLPDSGTYNTLIRAHLRDG 144
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 10/168 (5%)
Query: 48 YSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAV------- 100
Y++LI G F+A + A ++ M+ G+ PD++ Y I+L GL G++ +A+
Sbjct: 19 YTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVED 78
Query: 101 --KMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILIC 158
+F + +G+ P+ Y +I GFC G + A +L ++ L D+ T+ LI
Sbjct: 79 GWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIR 138
Query: 159 EMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHL 206
+ G + E+ +M A T+ L+ + G+LD+ L
Sbjct: 139 AHLRDGDKAASAELIKEMRSCRFAGDASTY-GLVTDMLHDGRLDKGFL 185
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 9/135 (6%)
Query: 220 FFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFC 279
FR V ++V+ ++ + +AG A ++ ++ GV PDI TYNIL++ C
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC 62
Query: 280 K---------AGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHML 330
K AG + + LF L LKG+ P+ VTY T+I G + +E+A+ + M
Sbjct: 63 KNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMK 122
Query: 331 KHVCEPSFAVYKALM 345
+ P Y L+
Sbjct: 123 EDGPLPDSGTYNTLI 137
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 10/135 (7%)
Query: 9 DLATFNVLLNGFCKQGKLEEAV---------SLLRLLERDGRGIRLSGYSSLIDGFFKAR 59
D+ T+N+LL+G CK GKLE+A+ L L G + Y+++I GF K
Sbjct: 50 DIMTYNILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKG 109
Query: 60 RYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYN 119
EA++L+ +M + G LPD Y ++R +G + ++ EM DA Y
Sbjct: 110 FKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG 169
Query: 120 AIIKGFCDIGQLDHA 134
+ D G+LD
Sbjct: 170 LVTDMLHD-GRLDKG 183
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 9/132 (6%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFK--- 57
M R + T+ L+ G + G + A + + + DG + Y+ L+DG K
Sbjct: 7 MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGK 66
Query: 58 ------ARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGL 111
A + + L+ + G+ P+V+ Y M+ G +G EA +F +M + G
Sbjct: 67 LEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGP 126
Query: 112 LPDAHCYNAIIK 123
LPD+ YN +I+
Sbjct: 127 LPDSGTYNTLIR 138
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 69/136 (50%), Gaps = 11/136 (8%)
Query: 254 KLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGL 313
+L +++ G+V + TY LI +AG+ + A ++FK++ G+ PD +TY L+DGL
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 314 YRVEREEDAF---KIRDHM-------LKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLE 363
+ + E A K+ D LK V +P+ Y +++ C+ A++L+ +
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGV-KPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 364 YLKSLPGRDNDSINAL 379
+ P D+ + N L
Sbjct: 121 MKEDGPLPDSGTYNTL 136
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:4962293-4965976 FORWARD LENGTH=1227
Length = 1227
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 136/308 (44%), Gaps = 18/308 (5%)
Query: 48 YSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMI 107
Y+ LI F+A+ + E + + M G+LPD + ++ G S+ +++ + MI
Sbjct: 912 YNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMI 971
Query: 108 QRGLLPDAHCYNAIIKGFCDIGQLDHARSL-HVEISGHDGLHDTCTHTILICEMCKKGMV 166
+G+ P+ A+ CD G + A L V S L + T ++ + KG +
Sbjct: 972 SKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEI 1031
Query: 167 REAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQG 226
+A++ ++ + G A ++ +I L G LD A L M +S
Sbjct: 1032 PKAEDFLTRVTRNGMM--APNYDNIIKKLSDRGNLDIAVHLLNTMLKNQS---------- 1079
Query: 227 SDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNG 286
+ S S + + Q A T++ + G+ P I T++ L++ FC+A +
Sbjct: 1080 ---IPGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLE 1136
Query: 287 AFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREE-DAFKIRDHMLKHVCEPSFAVYKALM 345
+ +L K + G SP + T+ID +RVE+ A ++ + M K E F + +L+
Sbjct: 1137 SERLIKSMVGLGESPSQEMFKTVIDR-FRVEKNTVKASEMMEMMQKCGYEVDFETHWSLI 1195
Query: 346 TWLCRGKK 353
+ + K+
Sbjct: 1196 SNMSSSKE 1203
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 130/315 (41%), Gaps = 45/315 (14%)
Query: 98 EAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVE-ISGHDGLHDTCTHTI- 155
+AV +F M ++GL+P CY +I + + + A + ++ + L+ +I
Sbjct: 201 KAVMLFDWMRRKGLVPLTSCYQILIDQLVRVHRTESAYRICLDWVETRAELNHMNIDSIG 260
Query: 156 -LICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIG 214
+I +C V+EA+ + ++ LGC ++ ++ + G + K D LL + E+
Sbjct: 261 KVIELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIGYNE--KQDFEDLLSFIGEVK 318
Query: 215 KSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNIL 274
P +F + + +C + AY + +L G D T+ IL
Sbjct: 319 YEPDVFVG--------------NRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGIL 364
Query: 275 INSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVC 334
I C G++ A ++ KG PD +Y ++ GL+R + I D M ++
Sbjct: 365 IGWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGM 424
Query: 335 EPSFAVYKALMTWLCRGKK-------------------------ISLAFSLY-LEYLKSL 368
S + +K ++T C+ ++ +S AFSL + L
Sbjct: 425 MLSLSTFKIMVTGYCKARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVR 484
Query: 369 PGRDNDSINALEEYF 383
RDNDS + E+F
Sbjct: 485 LKRDNDSTFSKAEFF 499
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/340 (20%), Positives = 136/340 (40%), Gaps = 15/340 (4%)
Query: 16 LLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKGG 75
L+ G GK+ +A + LR++ +G Y+ + G+ K + + + G M++
Sbjct: 809 LIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQGYCKGNNWMKVEEVLGLMVRKN 868
Query: 76 ILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHC-YNAIIKGFCDIGQLDHA 134
I+ V Y +R + E + A+ + ++ P YN +I
Sbjct: 869 IICSVKSYREYVRKMCLEPQSLSAISLKEFLLLGESNPGGVIIYNMLIFYMFRAKNHLEV 928
Query: 135 RSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALING 194
+ +E+ G L D T L+ + + M G P+ + A+ +
Sbjct: 929 NKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSS 988
Query: 195 LCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYK 254
LC G + +A L+ ME ++G + + SV K VE + G+ A
Sbjct: 989 LCDNGDVKKALDLWQVME-----------SKGWN-LGSSVVQTKIVETLISKGEIPKAED 1036
Query: 255 LLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLY 314
LT++ +G++ Y+ +I GN++ A L + P S +Y ++I+GL
Sbjct: 1037 FLTRVTRNGMMA--PNYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLL 1094
Query: 315 RVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKI 354
R + + A M++ PS + + L+ C ++
Sbjct: 1095 RYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQV 1134
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 101/450 (22%), Positives = 177/450 (39%), Gaps = 74/450 (16%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
+Q D T N L+ +CK+G + + + + I Y+SLI F K N+
Sbjct: 595 YQLDGETLNFLVQEYCKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLL 654
Query: 66 SLYGRMIKGGILPDV-----ILYAIMLRGLSNE-----GRV--------GEAVKMFAE-- 105
+++G LPD+ + ++ +GL E RV EA ++F E
Sbjct: 655 NVWGAAQNDNWLPDLNDCGDLWNCLVRKGLVEEVVQLFERVFISYPLSQSEACRIFVEKL 714
Query: 106 -----------MIQR----GLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDT 150
+++R G + + YN +IKG C + A ++ E+ +
Sbjct: 715 TVLGFSCIAHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSL 774
Query: 151 CTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGK-LDEAHLLFY 209
+ +LI +C+ +A FN E++ S+ ALI GL AGK LD + L
Sbjct: 775 GSCLMLIPRLCR---ANKAGTAFNLAEQI---DSSYVHYALIKGLSLAGKMLDAENQLRI 828
Query: 210 KMEIGKSP--SLFFRLAQG-------------------SDHVSDSVSLQKKVEHMCEAGQ 248
+ G S ++ + QG + + S ++ V MC Q
Sbjct: 829 MLSNGLSSYNKIYNVMFQGYCKGNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQ 888
Query: 249 TLNA-----YKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDS 303
+L+A + LL + GV+ YN+LI +A N K+ ++Q +G+ PD
Sbjct: 889 SLSAISLKEFLLLGESNPGGVI----IYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDE 944
Query: 304 VTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLY-- 361
T+ L+ G + + M+ +P+ +A+ + LC + A L+
Sbjct: 945 TTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQV 1004
Query: 362 LEYLKSLPGRDNDSINALEEYFMKGEVERA 391
+E G +E KGE+ +A
Sbjct: 1005 MESKGWNLGSSVVQTKIVETLISKGEIPKA 1034
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 154/394 (39%), Gaps = 68/394 (17%)
Query: 10 LATFNVLLNGFCKQGKLEEAVSLLR------LLERDGRGIRLSGYSSLI----------- 52
L+TF +++ G+CK + EEA ++ L+E LS SL+
Sbjct: 428 LSTFKIMVTGYCKARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRLKR 487
Query: 53 ---DGFFKARRYNE-AHSLY------------GRMIKGGILPDVILYAIMLRGLSNEGRV 96
F KA +++ + LY ++ +LP+ ++++R S +G +
Sbjct: 488 DNDSTFSKAEFFDDLGNGLYLHTDLDAYEQRVNMVLDRSVLPE--FNSLIVRA-SEDGDL 544
Query: 97 GEAVKMFAEMIQRGLLPDAHCYNAIIKGFC--------DIGQLDHARSLHVEISGHDGLH 148
A+++ EM + G + +++ C I L+ L ++ G
Sbjct: 545 QTALRLLDEMARWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGE---- 600
Query: 149 DTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLF 208
T L+ E CKKG R ++ +F++M ++ VT+ +LI CK L++ ++
Sbjct: 601 ---TLNFLVQEYCKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVW 657
Query: 209 YKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDI 268
AQ + + D + G +L ++ S +
Sbjct: 658 GA-------------AQNDNWLPDLNDCGDLWNCLVRKGLVEEVVQLFERVFISYPLSQS 704
Query: 269 KTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDH 328
+ I + G A + K L+ +G + Y LI GL +++ AF I D
Sbjct: 705 EACRIFVEKLTVLGFSCIAHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDE 764
Query: 329 ML--KHVCEPSFAVYKALMTWLCRGKKISLAFSL 360
ML KH+ PS L+ LCR K AF+L
Sbjct: 765 MLDKKHI--PSLGSCLMLIPRLCRANKAGTAFNL 796
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 96/240 (40%), Gaps = 20/240 (8%)
Query: 75 GILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHA 134
G D + + I++ EG + AV +E++ +G PD + YNAI+ G G H
Sbjct: 353 GFKQDEVTFGILIGWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHT 412
Query: 135 RSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALING 194
+ E+ + + T I++ CK EA+ + N+M G LI
Sbjct: 413 HCILDEMKENGMMLSLSTFKIMVTGYCKARQFEEAKRIVNKMFGYG----------LIEA 462
Query: 195 LCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAY- 253
L EA L +G P L RL + +D + + L+AY
Sbjct: 463 SKVEDPLSEAFSL-----VGFDP-LAVRLKRDNDSTFSKAEFFDDLGNGLYLHTDLDAYE 516
Query: 254 KLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGL 313
+ + + D V+P+ +N LI + G++ A +L ++ G ++ L+ L
Sbjct: 517 QRVNMVLDRSVLPE---FNSLIVRASEDGDLQTALRLLDEMARWGQKLSRRSFAVLMRSL 573
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 148/357 (41%), Gaps = 56/357 (15%)
Query: 156 LICEMCKKGMVREAQEMFNQMEKLGCFPSAVT-FNALINGLCKAGK-LDEAHLLFYKMEI 213
L+C +C+ G + +A+E +KL FP V FN ++NG C + EA ++ E+
Sbjct: 230 LLCALCRHGHIEKAEEFMLASKKL--FPVDVEGFNVILNGWCNIWTDVTEAKRIW--REM 285
Query: 214 GKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNI 273
G + + D S +S KV G ++ +L ++ G+ P I+ YN
Sbjct: 286 GN-----YCITPNKDSYSHMISCFSKV------GNLFDSLRLYDEMKKRGLAPGIEVYNS 334
Query: 274 LINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHV 333
L+ + + A KL K L +GL PDSVTY ++I L + + A + M+
Sbjct: 335 LVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISEN 394
Query: 334 CEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEVERAIR 393
P+ + A + ++ F LE L + D + EE F+
Sbjct: 395 LSPTVDTFHAFLE--------AVNFEKTLEVLGQMKISD---LGPTEETFL--------- 434
Query: 394 GLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLC 453
++L + K+ + AL I++ +D F I NP + I GL
Sbjct: 435 ------------------LILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLL 476
Query: 454 AKRNLYDAVVIFLYSLDKGFELGPKICKELLECLLVSQDKRKYAIDLIGRMKSRGYR 510
+ L A I+ KGF +G + ++LLE V ++ ++L GY+
Sbjct: 477 SCGWLEKAREIYSEMKSKGF-VGNPMLQKLLEEQKVKGVRKSKRMNLQKVGSQEGYK 532
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 107/226 (47%), Gaps = 10/226 (4%)
Query: 6 FQRDLATFNVLLNGFCK-QGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEA 64
F D+ FNV+LNG+C + EA + R + YS +I F K ++
Sbjct: 254 FPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDS 313
Query: 65 HSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKG 124
LY M K G+ P + +Y ++ L+ E EA+K+ ++ + GL PD+ YN++I+
Sbjct: 314 LRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRP 373
Query: 125 FCDIGQLDHARS-LHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFP 183
C+ G+LD AR+ L IS + H L +K + E+ QM+ P
Sbjct: 374 LCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAVNFEKTL-----EVLGQMKISDLGP 428
Query: 184 SAVTFNALINGLCKAGKLDEAHLLFYKM---EIGKSPSLFFRLAQG 226
+ TF ++ L K + + A ++ +M EI +P+L+ QG
Sbjct: 429 TEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQG 474
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 140/308 (45%), Gaps = 31/308 (10%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
+RD + +++ + + ++ A SL + + LI+G+ +A S
Sbjct: 932 ERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATS----NCLINGYMGLGNLEQAES 987
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
L+ +M + D+I + M++G S R EA+ +F +M++ G++PD + +I
Sbjct: 988 LFNQMP----VKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACA 1043
Query: 127 DIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAV 186
+G L+ + +H+ + + D + L+ K G + A +F + K F
Sbjct: 1044 HLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLF---- 1099
Query: 187 TFNALINGLCKAGKLDEAHLLFYKMEIG--KSPSLFFRLAQGSDHVSDSVSLQKKVEHMC 244
+N++I GL G EA +F KME+ K ++ F VS+ H
Sbjct: 1100 CWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTF------------VSVFTACTHAG 1147
Query: 245 EAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSV 304
+ Y+ + + D +V +++ Y +++ F KAG + A +L +++ + P++V
Sbjct: 1148 LVDEGRRIYR--SMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFE---PNAV 1202
Query: 305 TYGTLIDG 312
+G L+DG
Sbjct: 1203 IWGALLDG 1210
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 79/377 (20%), Positives = 148/377 (39%), Gaps = 72/377 (19%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
+D N + +L+ AVS + ++ + Y++L GF +
Sbjct: 801 LNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFV----YNALFKGFVTCSHPIRSL 856
Query: 66 SLYGRMIKGGILPDVILYAIMLRG---------------------------------LSN 92
LY RM++ + P Y+ +++ S
Sbjct: 857 ELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSA 916
Query: 93 EGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCT 152
GR+ EA K+F EM +R D + ++ + + +D A SL ++S + C
Sbjct: 917 TGRIREARKVFDEMPER----DDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNC- 971
Query: 153 HTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYK-M 211
LI G + +A+ +FNQM +++ +I G + + EA +FYK M
Sbjct: 972 ---LINGYMGLGNLEQAESLFNQMP----VKDIISWTTMIKGYSQNKRYREAIAVFYKMM 1024
Query: 212 EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHM--CEAGQTLNAYKLLTQLADSGVVPDIK 269
E G P D V+ S + H+ E G+ ++ Y L +G V D+
Sbjct: 1025 EEGIIP----------DEVTMSTVI-SACAHLGVLEIGKEVHMYTL-----QNGFVLDVY 1068
Query: 270 TYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHM 329
+ L++ + K G++ A +F +L K L + ++I+GL ++A K+ M
Sbjct: 1069 IGSALVDMYSKCGSLERALLVFFNLPKKNL----FCWNSIIEGLAAHGFAQEALKMFAKM 1124
Query: 330 LKHVCEPSFAVYKALMT 346
+P+ + ++ T
Sbjct: 1125 EMESVKPNAVTFVSVFT 1141
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 164/414 (39%), Gaps = 92/414 (22%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLL-ERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
+RDL ++NV++ G+ + L +A L ++ ERD + +++++ G+ + ++A
Sbjct: 123 ERDLVSWNVMIKGYVRNRNLGKARELFEIMPERD-----VCSWNTMLSGYAQNGCVDDAR 177
Query: 66 SLYGRMI-KGGILPDVILYAI--------------------------MLRGLSNEGRVGE 98
S++ RM K + + +L A +L G + ++ E
Sbjct: 178 SVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVE 237
Query: 99 AVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILIC 158
A + F M R D +N II G+ G++D AR L E + D T T ++
Sbjct: 238 ARQFFDSMNVR----DVVSWNTIITGYAQSGKIDEARQLFDE----SPVQDVFTWTAMVS 289
Query: 159 EMCKKGMVREAQEMFNQM-------------------------EKLGCFP--SAVTFNAL 191
+ MV EA+E+F++M E P + T+N +
Sbjct: 290 GYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTM 349
Query: 192 INGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLN 251
I G + GK+ EA LF KM + P + + G S + M G LN
Sbjct: 350 ITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLN 408
Query: 252 AYKLLTQLADSGVVPDIK-------------------TYNILINSFCKAGNMNGAFKLFK 292
+ L+ V ++ N L+ +CK G++ A LFK
Sbjct: 409 RSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFK 468
Query: 293 DLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMT 346
++ K D V++ T+I G R E A + + M + +P A A+++
Sbjct: 469 EMAGK----DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLS 518
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 129/310 (41%), Gaps = 61/310 (19%)
Query: 8 RDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSL 67
R+++T+N ++ G+ + GK+ +EA +L
Sbjct: 341 RNVSTWNTMITGYAQCGKI-----------------------------------SEAKNL 365
Query: 68 YGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCD 127
+ +M K D + +A M+ G S G EA+++F +M + G + +++ + D
Sbjct: 366 FDKMPK----RDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCAD 421
Query: 128 IGQLDHARSLHVEISGHDGLHDTC-THTILICEMCKKGMVREAQEMFNQMEKLGCFPSAV 186
+ L+ + LH + G C L+ CK G + EA ++F +M V
Sbjct: 422 VVALELGKQLHGRLV-KGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAG----KDIV 476
Query: 187 TFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEA 246
++N +I G + G + A F M+ R D + V++ H
Sbjct: 477 SWNTMIAGYSRHGFGEVALRFFESMK---------REGLKPDDAT-MVAVLSACSHTGLV 526
Query: 247 GQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTY 306
+ + +TQ D GV+P+ + Y +++ +AG + A L K++ + PD+ +
Sbjct: 527 DKGRQYFYTMTQ--DYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFE---PDAAIW 581
Query: 307 GTLIDGLYRV 316
GTL+ G RV
Sbjct: 582 GTLL-GASRV 590
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 118/267 (44%), Gaps = 11/267 (4%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
+RD ++ ++ G+ + G EA+ L +ER+G + S +SS +
Sbjct: 371 KRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQ 430
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
L+GR++KGG + +L G + EA +F EM + ++ +N +I G+
Sbjct: 431 LHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVS----WNTMIAGYS 486
Query: 127 DIGQLDHARSLHVEISGHDGLH-DTCTHTILICEMCKKGMVREAQEMFNQM-EKLGCFPS 184
G + A E +GL D T ++ G+V + ++ F M + G P+
Sbjct: 487 RHGFGEVALRF-FESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPN 545
Query: 185 AVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMC 244
+ + +++ L +AG L++AH L M +++ L G+ V + L +
Sbjct: 546 SQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLL-GASRVHGNTELAETAADKI 604
Query: 245 EAGQTLNA--YKLLTQL-ADSGVVPDI 268
A + N+ Y LL+ L A SG D+
Sbjct: 605 FAMEPENSGMYVLLSNLYASSGRWGDV 631
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 102/232 (43%), Gaps = 29/232 (12%)
Query: 235 SLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDL 294
SL++ + + QT K L + DS DIK +N+ I+S+ + G N A ++FK +
Sbjct: 39 SLKRATQTQIQKSQT----KPLLKCGDS----DIKEWNVAISSYMRTGRCNEALRVFKRM 90
Query: 295 QLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKI 354
SV+Y +I G R E A K+ D M E + ++ R + +
Sbjct: 91 P----RWSSVSYNGMISGYLRNGEFELARKLFDEMP----ERDLVSWNVMIKGYVRNRNL 142
Query: 355 SLAFSLYLEYLKSLPGRDNDSINA-LEEYFMKGEVERAIRGLLELDFRFRDFNLAPYSIL 413
A L+ + +P RD S N L Y G V+ A R + + R + N ++ L
Sbjct: 143 GKARELF----EIMPERDVCSWNTMLSGYAQNGCVDDA-RSVFD---RMPEKNDVSWNAL 194
Query: 414 LIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIF 465
L + Q K++EA ++F + + + S L+ G K+ + +A F
Sbjct: 195 LSAYVQNSKMEEACMLFKSRENWAL----VSWNCLLGGFVKKKKIVEARQFF 242
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 101/211 (47%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
+ ++ TF ++ K+ EE +L+L+E++ + L Y LIDGF + EA
Sbjct: 243 KANIVTFKSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAER 302
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
L M + + LY +++ G S G V + +++++EM RG+ P+ Y ++ G C
Sbjct: 303 LVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLC 362
Query: 127 DIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAV 186
G++ A S E+ ++ D ++ L E + GM+ ++ E+ +M + G P A
Sbjct: 363 KAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIPGAT 422
Query: 187 TFNALINGLCKAGKLDEAHLLFYKMEIGKSP 217
L + L + + + L+ ++ G P
Sbjct: 423 ICERLADSLFEVNRKEAQMLITIVVKCGIKP 453
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 115/289 (39%), Gaps = 21/289 (7%)
Query: 48 YSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMI 107
++S+I + +++E ++ M + D + L L ++ A F+ M+
Sbjct: 142 FNSMIMVYSDNGKFSEVVEVFEYMKNNEVKIDEKTCTLHLLNLKRCDQMELARDFFSLMV 201
Query: 108 QRGL-LPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLH-DTCTHTILICEMCKKGM 165
+ G+ + + ++ C G++ AR L E+ G+ + T +I K+
Sbjct: 202 ESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRWD 261
Query: 166 VREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGK---SPSLFFR 222
E + MEK ++ LI+G GK++EA L M K L+
Sbjct: 262 FEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNL 321
Query: 223 LAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAG 282
+ G G +L ++++ GV P+ TY +L+N CKAG
Sbjct: 322 IMNGYSRF----------------GLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAG 365
Query: 283 NMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLK 331
+ A +L++ D Y TL + YRV + + ++ M++
Sbjct: 366 KVCEAMSFLNELRVNEFEIDEEMYSTLSEECYRVGMIDKSLEVVAEMIR 414
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 85/394 (21%), Positives = 159/394 (40%), Gaps = 79/394 (20%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
++RD+ ++N LL+G+ + G++++A L L+ + ++++I G+ Y EA
Sbjct: 171 YERDVISWNSLLSGYARLGQMKKAKGLFHLMLDK----TIVSWTAMISGYTGIGCYVEAM 226
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEG--RVGEAVKMFAEMIQRGLLPDAHCYNAIIK 123
+ M GI PD I +L + G +G+ + ++AE +RG L NA+I+
Sbjct: 227 DFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAE--RRGFLKQTGVCNALIE 284
Query: 124 GFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFP 183
+ G + A L ++ G D + + +I G A E FN+M++ P
Sbjct: 285 MYSKCGVISQAIQLFGQMEG----KDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKP 340
Query: 184 SAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHM 243
+ +TF L++ G E
Sbjct: 341 NGITFLGLLSACSHVGMWQEG--------------------------------------- 361
Query: 244 CEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDS 303
L + ++ Q D + P I+ Y LI+ +AG + A ++ K + +K PDS
Sbjct: 362 ------LRYFDMMRQ--DYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMK---PDS 410
Query: 304 VTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPS--------FAVYKALMTW--LCRGKK 353
+G+L+ + A DH+++ EP +Y L W + R +K
Sbjct: 411 KIWGSLLSSCRTPGNLDVALVAMDHLVE--LEPEDMGNYVLLANIYADLGKWEDVSRLRK 468
Query: 354 ISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGE 387
+ + E +K PG +N + + F+ G+
Sbjct: 469 M-----IRNENMKKTPGGSLIEVNNIVQEFVSGD 497
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/350 (18%), Positives = 142/350 (40%), Gaps = 59/350 (16%)
Query: 78 PDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGL-LPDAHCYNAIIKGFCDIGQLDHARS 136
P+V LY ++R ++ + ++++ +++++ LPD + + K +G +
Sbjct: 71 PNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQ 130
Query: 137 LHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLC 196
+H + T LI K + +A ++F++M + +++N+L++G
Sbjct: 131 VHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYE----RDVISWNSLLSGYA 186
Query: 197 KAGKLDEA----HLLFYKMEIGKSPSL--------------FFRLAQGSDHVSDSVSLQK 238
+ G++ +A HL+ K + + + FFR Q + D +SL
Sbjct: 187 RLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLIS 246
Query: 239 KVEHMCEAG-------------------QTLNAYKLLTQLADSGVVP------------D 267
+ + G QT L+ + GV+ D
Sbjct: 247 VLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKD 306
Query: 268 IKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRD 327
+ +++ +I+ + GN +GA + F ++Q + P+ +T+ L+ V ++ + D
Sbjct: 307 VISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFD 366
Query: 328 HMLK-HVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSI 376
M + + EP Y L+ L R K+ A +E K++P + + I
Sbjct: 367 MMRQDYQIEPKIEHYGCLIDVLARAGKLERA----VEITKTMPMKPDSKI 412
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 120/268 (44%), Gaps = 31/268 (11%)
Query: 49 SSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQ 108
S+LID + K + + A +++ RM + +V+ + M+ G GR EAVK+F +M +
Sbjct: 309 SALIDMYCKCKCLHYAKTVFDRMKQ----KNVVSWTAMVVGYGQTGRAEEAVKIFLDMQR 364
Query: 109 RGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVRE 168
G+ PD + I ++ L+ H + +H L+ K G + +
Sbjct: 365 SGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDD 424
Query: 169 AQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSPSLFFRLAQGS 227
+ +FN+M AV++ A+++ + G+ E LF KM + G P
Sbjct: 425 STRLFNEMN----VRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKP---------- 470
Query: 228 DHVSDSVSLQKKVEHMCEAG---QTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNM 284
D V+L + AG + +KL+T ++ G+VP I Y+ +I+ F ++G +
Sbjct: 471 ----DGVTLTGVISACSRAGLVEKGQRYFKLMT--SEYGIVPSIGHYSCMIDLFSRSGRL 524
Query: 285 NGAFKLFKDLQLKGLSPDSVTYGTLIDG 312
A + + PD++ + TL+
Sbjct: 525 EEAMRFINGMPFP---PDAIGWTTLLSA 549
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 134/289 (46%), Gaps = 26/289 (8%)
Query: 48 YSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMI 107
Y+SL+ G +A L+ M K D + +A M++GL+ G EA++ F EM
Sbjct: 208 YNSLMGGLLACGMIEDALQLFRGMEK-----DSVSWAAMIKGLAQNGLAKEAIECFREMK 262
Query: 108 QRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVR 167
+GL D + + +++ +G ++ + +H I + + LI CK +
Sbjct: 263 VQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLH 322
Query: 168 EAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGS 227
A+ +F++M++ + V++ A++ G + G+ +EA +F M+ + L Q
Sbjct: 323 YAKTVFDRMKQ----KNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAI 378
Query: 228 DHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGA 287
++ SL++ + +A SG++ + N L+ + K G+++ +
Sbjct: 379 SACANVSSLEEGSQFHGKA-------------ITSGLIHYVTVSNSLVTLYGKCGDIDDS 425
Query: 288 FKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEP 336
+LF ++ ++ D+V++ ++ + R + ++ D M++H +P
Sbjct: 426 TRLFNEMNVR----DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKP 470
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 89/202 (44%), Gaps = 5/202 (2%)
Query: 4 RRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNE 63
R Q+++ ++ ++ G+ + G+ EEAV + ++R G I E
Sbjct: 330 RMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEE 389
Query: 64 AHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIK 123
+G+ I G++ V + ++ G + ++ ++F EM R DA + A++
Sbjct: 390 GSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR----DAVSWTAMVS 445
Query: 124 GFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQM-EKLGCF 182
+ G+ L ++ H D T T +I + G+V + Q F M + G
Sbjct: 446 AYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIV 505
Query: 183 PSAVTFNALINGLCKAGKLDEA 204
PS ++ +I+ ++G+L+EA
Sbjct: 506 PSIGHYSCMIDLFSRSGRLEEA 527
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 130/298 (43%), Gaps = 29/298 (9%)
Query: 13 FNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMI 72
+NVL+NG+C+ + A +L R + G +S+LI G+ + N A L+ M
Sbjct: 199 WNVLINGYCRAKDMHMATTLFRSMPERNSG----SWSTLIKGYVDSGELNRAKQLFELMP 254
Query: 73 KGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLD 132
+ +V+ + ++ G S G A+ + EM+++GL P+ + A++ G L
Sbjct: 255 E----KNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALG 310
Query: 133 HARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALI 192
+H I + D T L+ K G + A +F+ M +++ A+I
Sbjct: 311 SGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNH----KDILSWTAMI 366
Query: 193 NGLCKAGKLDEAHLLFYKMEI-GKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLN 251
G G+ +A F +M G+ P LA + ++ S E LN
Sbjct: 367 QGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSS-----------EVDLGLN 415
Query: 252 AYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTL 309
+ + D + P +K Y ++++ +AG +N A +L +++ ++PD T+ L
Sbjct: 416 FFD--SMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMP---INPDLTTWAAL 468
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/359 (20%), Positives = 149/359 (41%), Gaps = 27/359 (7%)
Query: 86 MLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHD 145
++RGL+ R +V+ F M++ G+ PD + ++K +G R+LH +
Sbjct: 97 LIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNF 156
Query: 146 GLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAH 205
D+ L+ K G ++ A ++F + S + +N LING C+A + A
Sbjct: 157 VDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMAT 216
Query: 206 LLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVV 265
LF M P +S S ++ ++G+ A +L + + VV
Sbjct: 217 TLFRSM-----PE------------RNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVV 259
Query: 266 PDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKI 325
++ LIN F + G+ A + ++ KGL P+ T ++ + +I
Sbjct: 260 ----SWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRI 315
Query: 326 RDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINAL-EEYFM 384
++L + + A+ AL+ + ++ A +++ ++ +D S A+ + + +
Sbjct: 316 HGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVF----SNMNHKDILSWTAMIQGWAV 371
Query: 385 KGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPT 443
G +AI+ ++ + + + +L + +VD L F + + I PT
Sbjct: 372 HGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSM-RLDYAIEPT 429
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 154/344 (44%), Gaps = 39/344 (11%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLL-RLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
+RD ++N +L G K G+L +A L + +RD L +++++DG+ + R ++A
Sbjct: 182 ERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRD-----LISWNTMLDGYARCREMSKAF 236
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLP--DAHCYNAIIK 123
L+ +M + + + ++ M+ G S G + A MF +M LP + + II
Sbjct: 237 ELFEKMPER----NTVSWSTMVMGYSKAGDMEMARVMFDKMP----LPAKNVVTWTIIIA 288
Query: 124 GFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMC-KKGMVREAQEMFNQMEKLGCF 182
G+ + G L A L V+ GL I I C + G++ + + +++
Sbjct: 289 GYAEKGLLKEADRL-VDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLG 347
Query: 183 PSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEH 242
+A NAL++ K G L +A +F +I K D VS +
Sbjct: 348 SNAYVLNALLDMYAKCGNLKKAFDVFN--DIPK---------------KDLVSWNTMLHG 390
Query: 243 MCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQ-LKGLSP 301
+ G A +L +++ G+ PD T+ ++ S AG ++ F ++ + L P
Sbjct: 391 LGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVP 450
Query: 302 DSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALM 345
YG L+D L RV R ++A K+ M EP+ ++ AL+
Sbjct: 451 QVEHYGCLVDLLGRVGRLKEAIKVVQTM---PMEPNVVIWGALL 491
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 164/351 (46%), Gaps = 39/351 (11%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLL-RLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
QRDL ++N +L+G+ + ++ +A L ++ ER+ +S+++ G+ KA A
Sbjct: 213 QRDLISWNTMLDGYARCREMSKAFELFEKMPERN-----TVSWSTMVMGYSKAGDMEMAR 267
Query: 66 SLYGRMIKGGILP--DVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIK 123
++ +M LP +V+ + I++ G + +G + EA ++ +M+ GL DA +I+
Sbjct: 268 VMFDKM----PLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILA 323
Query: 124 GFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFP 183
+ G L +H + + + L+ K G +++A ++FN + K
Sbjct: 324 ACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPK----K 379
Query: 184 SAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHM 243
V++N +++GL G EA LF +M R D V+ +++ H
Sbjct: 380 DLVSWNTMLHGLGVHGHGKEAIELFSRMR---------REGIRPDKVT-FIAVLCSCNHA 429
Query: 244 CEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDS 303
+ ++ + + ++ D +VP ++ Y L++ + G + A K+ +Q + P+
Sbjct: 430 GLIDEGIDYFYSMEKVYD--LVPQVEHYGCLVDLLGRVGRLKEAIKV---VQTMPMEPNV 484
Query: 304 VTYGTLIDGLYRVEREED-AFKIRDHMLK-HVCEPS-----FAVYKALMTW 347
V +G L+ G R+ E D A ++ D+++K C+P +Y A W
Sbjct: 485 VIWGALL-GACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDW 534
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 93/482 (19%), Positives = 198/482 (41%), Gaps = 78/482 (16%)
Query: 57 KARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAH 116
K N+ L+ ++I+ + D+ + ++ LS + AV++F ++ + P+ H
Sbjct: 28 KCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQE----PNVH 83
Query: 117 CYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQM 176
N++I+ Q A + E+ D T+ L+ + + + M N +
Sbjct: 84 LCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHI 143
Query: 177 EKLGC-----FPSA----------------------------VTFNALINGLCKAGKLDE 203
EKLG P+A V++N+++ GL KAG+L +
Sbjct: 144 EKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRD 203
Query: 204 AHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSG 263
A LF +M D +S ++ + A++L ++ +
Sbjct: 204 ARRLFDEMP-----------------QRDLISWNTMLDGYARCREMSKAFELFEKMPERN 246
Query: 264 VVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAF 323
V +++ ++ + KAG+M A +F + L + + VT+ +I G ++A
Sbjct: 247 TV----SWSTMVMGYSKAGDMEMARVMFDKMPLP--AKNVVTWTIIIAGYAEKGLLKEAD 300
Query: 324 KIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYF 383
++ D M+ + A +++ +SL ++ +S G + +NAL + +
Sbjct: 301 RLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMY 360
Query: 384 MK-GEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININP 442
K G +++A ++ + +L ++ +L G EA+ +FS + I +
Sbjct: 361 AKCGNLKKAFDVFNDIPKK----DLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDK 416
Query: 443 TSCVHLISGLCAKRNLYDAVVIFLYSLDKGFELGPKICKELLECLLVSQDKRKYAIDLIG 502
+ + ++ C L D + + YS++K ++L P++ E CL +DL+G
Sbjct: 417 VTFIAVLCS-CNHAGLIDEGIDYFYSMEKVYDLVPQV--EHYGCL----------VDLLG 463
Query: 503 RM 504
R+
Sbjct: 464 RV 465
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 7/211 (3%)
Query: 5 RFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIR--LSGYSSLIDGFFKARRYN 62
+FQ DL TFN+LL+G+ + E ++ G+G++ + Y+SLID + K R
Sbjct: 209 QFQPDLQTFNILLSGWKSSEEAEAFFEEMK-----GKGLKPDVVTYNSLIDVYCKDREIE 263
Query: 63 EAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAII 122
+A+ L +M + PDVI Y ++ GL G+ +A ++ EM + G PD YNA I
Sbjct: 264 KAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAI 323
Query: 123 KGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCF 182
+ FC +L A L E+ + T+ + + + + E++ +M C
Sbjct: 324 RNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECL 383
Query: 183 PSAVTFNALINGLCKAGKLDEAHLLFYKMEI 213
P+ + LI + K+D A L+ M +
Sbjct: 384 PNTQSCMFLIKMFKRHEKVDMAMRLWEDMVV 414
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 123/258 (47%), Gaps = 29/258 (11%)
Query: 48 YSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMI 107
+++L+ + + +A ++Y +K PD+ + I+L G + EA F EM
Sbjct: 183 FNALLRTLCQEKSMTDARNVY-HSLKHQFQPDLQTFNILLSGWKS---SEEAEAFFEEMK 238
Query: 108 QRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVR 167
+GL PD YN++I +C +++ A L ++ + D T+T +I + G
Sbjct: 239 GKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPD 298
Query: 168 EAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EIGKSP-----SLFF 221
+A+E+ +M++ GC+P +NA I C A +L +A L +M + G SP +LFF
Sbjct: 299 KAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFF 358
Query: 222 RLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKA 281
R+ ++ + S ++L ++ + +P+ ++ LI F +
Sbjct: 359 RVLSLANDLGRS-------------------WELYVRMLGNECLPNTQSCMFLIKMFKRH 399
Query: 282 GNMNGAFKLFKDLQLKGL 299
++ A +L++D+ +KG
Sbjct: 400 EKVDMAMRLWEDMVVKGF 417
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 105/240 (43%), Gaps = 35/240 (14%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D+ T+N L++ +CK ++E+A L+ + + + Y+++I G + ++A +
Sbjct: 245 DVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVL 304
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
M + G PDV Y +R R+G+A K+ EM+++GL P+A YN +
Sbjct: 305 KEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLA 364
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILIC----------------EMCKKGM------- 165
L + L+V + G++ L +T + LI +M KG
Sbjct: 365 NDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVS 424
Query: 166 ------------VREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEI 213
V EA++ +M + G PS V+F + + A K DE + L KM I
Sbjct: 425 DVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLMELANKHDEVNNLIQKMAI 484
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 102/256 (39%), Gaps = 20/256 (7%)
Query: 130 QLDHARSLHVEISGHD-GLHDTCTHTILICEMCKKGMVREAQEMFNQMEKL-GCFPSAVT 187
+ D L +E D L T +++ + K VR+ E F + ++L F
Sbjct: 123 KFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKRLVPDFFDTAC 182
Query: 188 FNALINGLCKAGKLDEAHLLFYKMEIGKSPSL------------------FFRLAQGSDH 229
FNAL+ LC+ + +A +++ ++ P L FF +G
Sbjct: 183 FNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGWKSSEEAEAFFEEMKGKGL 242
Query: 230 VSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFK 289
D V+ ++ C+ + AYKL+ ++ + PD+ TY +I G + A +
Sbjct: 243 KPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKARE 302
Query: 290 LFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLC 349
+ K+++ G PD Y I R DA K+ D M+K P+ Y L
Sbjct: 303 VLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLS 362
Query: 350 RGKKISLAFSLYLEYL 365
+ ++ LY+ L
Sbjct: 363 LANDLGRSWELYVRML 378
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 154/361 (42%), Gaps = 38/361 (10%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
QR + +NV+++G+ K G EEA L ++ + + ++ +I GF K + A
Sbjct: 164 QRKGSDWNVMISGYWKWGNKEEACKLFDMMPEND----VVSWTVMITGFAKVKDLENARK 219
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
+ RM + V+ + ML G + G +A+++F +M++ G+ P+ + +I
Sbjct: 220 YFDRMPEKS----VVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACS 275
Query: 127 DIGQLDHARSLHVEISGHDGLHDTC-THTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
RSL V++ + C T L+ K ++ A+ +FN+ LG +
Sbjct: 276 FRADPSLTRSL-VKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNE---LGTQRNL 331
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCE 245
VT+NA+I+G + G + A LF M ++ + L G H + + E M +
Sbjct: 332 VTWNAMISGYTRIGDMSSARQLFDTMP-KRNVVSWNSLIAGYAHNGQAALAIEFFEDMID 390
Query: 246 AGQT-LNAYKLLTQLADSGVVPDIKT-------------------YNILINSFCKAGNMN 285
G + + +++ L+ G + D++ Y LI + + GN+
Sbjct: 391 YGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLW 450
Query: 286 GAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALM 345
A ++F +++ + D V+Y TL + + M EP Y +++
Sbjct: 451 EAKRVFDEMKER----DVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVL 506
Query: 346 T 346
T
Sbjct: 507 T 507
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 104/250 (41%), Gaps = 31/250 (12%)
Query: 64 AHSLYGRMIKGGI-LPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAII 122
A S Y R+I + P+V + M + S + ++++ + + G++PDA + +I
Sbjct: 54 APSYYTRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVI 113
Query: 123 KGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCF 182
K G L A VE G D +++ K V A+++F+Q+ +
Sbjct: 114 KSAGRFGILFQA---LVEKLGF--FKDPYVRNVIMDMYVKHESVESARKVFDQISQ---- 164
Query: 183 PSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEH 242
+N +I+G K G +EA LF M P +D VS +
Sbjct: 165 RKGSDWNVMISGYWKWGNKEEACKLFDMM-----PE------------NDVVSWTVMITG 207
Query: 243 MCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPD 302
+ NA K ++ + VV ++N +++ + + G A +LF D+ G+ P+
Sbjct: 208 FAKVKDLENARKYFDRMPEKSVV----SWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPN 263
Query: 303 SVTYGTLIDG 312
T+ +I
Sbjct: 264 ETTWVIVISA 273
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 173/391 (44%), Gaps = 43/391 (10%)
Query: 20 FCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKGGILPD 79
+ K+G+ ++A + +E D + ++++IDG+ ++ + + A ++ +M + D
Sbjct: 119 YSKRGRFKKARLVFDYME-DKNSVT---WNTMIDGYMRSGQVDNAAKMFDKMPE----RD 170
Query: 80 VILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHV 139
+I + M+ G +G EA+ F EM G+ PD A + ++G L +H
Sbjct: 171 LISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHR 230
Query: 140 EISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAG 199
+ D ++ LI C+ G V A+++F MEK + V++N++I G G
Sbjct: 231 YVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEK----RTVVSWNSVIVGFAANG 286
Query: 200 KLDEAHLLFYKM-EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQ 258
E+ + F KM E G P D V+ + +L H+ + L ++++
Sbjct: 287 NAHESLVYFRKMQEKGFKP----------DAVTFTGALT-ACSHVGLVEEGLRYFQIMK- 334
Query: 259 LADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVER 318
D + P I+ Y L++ + +AG + A KL + + +K P+ V G+L L
Sbjct: 335 -CDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMK---PNEVVIGSL---LAACSN 387
Query: 319 EEDAFKIRDHMLKHVCE---PSFAVYKALMTWLCRGKKISLAFSLYLEY----LKSLPGR 371
+ + + ++KH+ + S + Y L K A + + LK PG
Sbjct: 388 HGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGF 447
Query: 372 DNDSINALEEYFMKGE---VERA-IRGLLEL 398
+ I+ FM G+ VE IR +LEL
Sbjct: 448 SSIEIDDCMHVFMAGDNAHVETTYIREVLEL 478
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 147/355 (41%), Gaps = 50/355 (14%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
+ +LAT+ +L + G L + L+ + I L ++LID + K + ++A
Sbjct: 201 EPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMR 260
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEM-IQRGLLPDAHCYNAIIKGF 125
++G + K D + + M+ GL + R EA+ +F+ M G+ PD H +++
Sbjct: 261 VFGELEK----KDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSAC 316
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFN----------- 174
+G +DH R +H I DT T ++ K G + A E+FN
Sbjct: 317 ASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWN 376
Query: 175 --------------------QMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIG 214
+M KLG P+ VTF A +N C G +DE F+KM+
Sbjct: 377 ALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMK-S 435
Query: 215 KSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNIL 274
+ +LF +L +H + L +C AG A +L+ + V PD++ +
Sbjct: 436 REYNLFPKL----EHYGCMIDL------LCRAGLLDEALELVKAMP---VKPDVRICGAI 482
Query: 275 INSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHM 329
+++ G + K D L DS Y L + R +D +IR M
Sbjct: 483 LSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLM 537
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 142/341 (41%), Gaps = 61/341 (17%)
Query: 8 RDLATFNVLLNGFCKQGKLEEAVSLLRLLERD---------------------GRGIR-- 44
RD+ ++ ++ GF + G +EA+ ++ + G+GI
Sbjct: 170 RDVVSWTGIITGFTRTGLYKEALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGL 229
Query: 45 ---------LSGYSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGR 95
L ++LID + K + ++A ++G + K D + + M+ GL + R
Sbjct: 230 ILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEK----KDKVSWNSMISGLVHCER 285
Query: 96 VGEAVKMFAEM-IQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHT 154
EA+ +F+ M G+ PD H +++ +G +DH R +H I DT T
Sbjct: 286 SKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGT 345
Query: 155 ILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM-EI 213
++ K G + A E+FN + F T+NAL+ GL G E+ F +M ++
Sbjct: 346 AIVDMYAKCGYIETALEIFNGIRSKNVF----TWNALLGGLAIHGHGLESLRYFEEMVKL 401
Query: 214 GKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLA--DSGVVPDIKTY 271
G P+L V+ + C G + ++ + + P ++ Y
Sbjct: 402 GFKPNL--------------VTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHY 447
Query: 272 NILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDG 312
+I+ C+AG ++ A +L K + +K PD G ++
Sbjct: 448 GCMIDLLCRAGLLDEALELVKAMPVK---PDVRICGAILSA 485
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 151/342 (44%), Gaps = 34/342 (9%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
QR++ ++ +++ + K ++A+ LL L+ RD + YSS++ ++
Sbjct: 124 QRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRS---CNGMSDVRM 180
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
L+ +IK G+ DV + + ++ + G +A+ +F EM+ DA +N+II GF
Sbjct: 181 LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVT----GDAIVWNSIIGGFA 236
Query: 127 DIGQLDHARSL--HVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPS 184
+ D A L ++ +G T T + C G+ M + +
Sbjct: 237 QNSRSDVALELFKRMKRAGFIAEQATLTSVLRAC----TGLALLELGMQAHVHIVKYDQD 292
Query: 185 AVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMC 244
+ NAL++ CK G L++A +F +M+ D ++ + +
Sbjct: 293 LILNNALVDMYCKCGSLEDALRVFNQMK-----------------ERDVITWSTMISGLA 335
Query: 245 EAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQ-LKGLSPDS 303
+ G + A KL ++ SG P+ T ++ + AG + + F+ ++ L G+ P
Sbjct: 336 QNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVR 395
Query: 304 VTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALM 345
YG +ID L + + +DA K+ + M CEP ++ L+
Sbjct: 396 EHYGCMIDLLGKAGKLDDAVKLLNEM---ECEPDAVTWRTLL 434
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 146/334 (43%), Gaps = 38/334 (11%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D AT++ L+ + E + R L +G + + LI+ + K N+AH L+
Sbjct: 60 DSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLF 119
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
+M + +VI + M+ S +A+++ M++ + P+ + Y+++++ C+
Sbjct: 120 DQMPQ----RNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRS-CN- 173
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
+ R LH I D + LI K G +A +F++M A+ +
Sbjct: 174 -GMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM----VTGDAIVW 228
Query: 189 NALINGLCKAGKLDEAHLLFYKME----IGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMC 244
N++I G + + D A LF +M+ I + +L L + + +Q V H+
Sbjct: 229 NSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHV-HIV 287
Query: 245 EAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSV 304
+ Q D+ N L++ +CK G++ A ++F ++ + D +
Sbjct: 288 KYDQ------------------DLILNNALVDMYCKCGSLEDALRVFNQMKER----DVI 325
Query: 305 TYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSF 338
T+ T+I GL + ++A K+ + M +P++
Sbjct: 326 TWSTMISGLAQNGYSQEALKLFERMKSSGTKPNY 359
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 102/475 (21%), Positives = 197/475 (41%), Gaps = 57/475 (12%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLL-ERDGRGIRLSGYSSLIDGFFKARRYNEAHSL 67
D A+FN++++G+ + +L +A+ L ++ ER Y++LI G+ + +++EA L
Sbjct: 106 DSASFNIMVDGYVRSRRLWDALKLFDVMPERS-----CVSYTTLIKGYAQNNQWSEAMEL 160
Query: 68 YGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCD 127
+ M GI+ + + A ++ S+ G + + + + I+ L ++ +C
Sbjct: 161 FREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCL 220
Query: 128 IGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVT 187
L AR L E+ + T +++ K G++ +A+E+F+Q+ + V+
Sbjct: 221 CLCLKDARKLFDEMPE----RNLVTWNVMLNGYSKAGLIEQAEELFDQITE----KDIVS 272
Query: 188 FNALINGLCKAGKLDEAHLLFYKM-EIGKSPS---LFFRLAQGSDHVSDSVS-------- 235
+ +I+G + +LDEA + + +M G PS + L+ + V S
Sbjct: 273 WGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIV 332
Query: 236 ---------LQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNG 286
LQ + H N KL Q ++ V I + N LI F K G +
Sbjct: 333 KRGFDCYDFLQATIIHFYAVS---NDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQ 389
Query: 287 AFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMT 346
A ++F K D ++ +I G + + A + M+ S V +T
Sbjct: 390 AREVFDQTHDK----DIFSWNAMISGYAQSLSPQLALHLFREMIS-----SSQVKPDAIT 440
Query: 347 WLCRGKKISLAFSL--------YLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLEL 398
+ IS SL YL + ++P DN + ++ Y G +E A+ +
Sbjct: 441 MVSVFSAISSLGSLEEGKRAHDYLNF-STIPPNDNLTAAIIDMYAKCGSIETAL-NIFHQ 498
Query: 399 DFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLC 453
++P++ ++ G AL ++S L I N + V ++S C
Sbjct: 499 TKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACC 553
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/373 (21%), Positives = 158/373 (42%), Gaps = 36/373 (9%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLL-RLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
+R+L T+NV+LNG+ K G +E+A L ++ E+D + + ++IDG + + +EA
Sbjct: 236 ERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKD-----IVSWGTMIDGCLRKNQLDEAL 290
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYN---AII 122
Y M++ G+ P ++ +L + + +++ +++RG CY+ A I
Sbjct: 291 VYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGF----DCYDFLQATI 346
Query: 123 KGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCF 182
F + E S D + + LI K GMV +A+E+F+Q F
Sbjct: 347 IHFYAVSNDIKLALQQFEASVKDHI---ASRNALIAGFVKNGMVEQAREVFDQTHDKDIF 403
Query: 183 PSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEH 242
++NA+I+G ++ A LF +M S D++++
Sbjct: 404 ----SWNAMISGYAQSLSPQLALHLFREM------------ISSSQVKPDAITMVSVFSA 447
Query: 243 MCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPD 302
+ G + L S + P+ +I+ + K G++ A +F Q K +S
Sbjct: 448 ISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFH--QTKNISSS 505
Query: 303 SVT-YGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLY 361
+++ + +I G + A + + +P+ + +++ C + L Y
Sbjct: 506 TISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELG-KTY 564
Query: 362 LEYLKSLPGRDND 374
E +KS G + D
Sbjct: 565 FESMKSDHGIEPD 577
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/388 (20%), Positives = 167/388 (43%), Gaps = 33/388 (8%)
Query: 4 RRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNE 63
R +D+ T + LL + ++G LEE V +L +E G + ++ ++ GF ++ + E
Sbjct: 176 RMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKE 235
Query: 64 AHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIK 123
A ++ ++ G PD + + +L + + + + +I++GLL D +A+I
Sbjct: 236 AVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMID 295
Query: 124 GFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFP 183
+ G + SL + + + I + + G+V +A EMF ++
Sbjct: 296 MYGKSGHVYGIISLFNQFE----MMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMEL 351
Query: 184 SAVTFNALINGLCKAGKLDEAHLLFYKMEIG-------KSPSLF------FRLAQGSD-- 228
+ V++ ++I G + GK EA LF +M++ PS+ L G
Sbjct: 352 NVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTH 411
Query: 229 ------HVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAG 282
H+ D+V + + M +N +++ + + ++ +N L+N F G
Sbjct: 412 GFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPT---KNLVCWNSLMNGFSMHG 468
Query: 283 NMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHML-KHVCEPSFAVY 341
+F+ L L PD +++ +L+ +V ++ +K M ++ +P Y
Sbjct: 469 KAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHY 528
Query: 342 KALMTWLCRGKKISLAFSLYLEYLKSLP 369
++ L R K+ A+ L +K +P
Sbjct: 529 SCMVNLLGRAGKLQEAYDL----IKEMP 552
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 147/333 (44%), Gaps = 33/333 (9%)
Query: 8 RDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSL 67
+D + +++ + K G + +SL E G+ ++ I G + ++A +
Sbjct: 285 KDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGV----CNAYITGLSRNGLVDKALEM 340
Query: 68 YGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCD 127
+ + + +V+ + ++ G + G+ EA+++F EM G+ P+ +++ +
Sbjct: 341 FELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGN 400
Query: 128 IGQLDHARSLH---VEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPS 184
I L H RS H V + D +H + LI K G + +Q +FN M +
Sbjct: 401 IAALGHGRSTHGFAVRVHLLDNVH---VGSALIDMYAKCGRINLSQIVFNMMPT----KN 453
Query: 185 AVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMC 244
V +N+L+NG GK E +F + + RL D +S +
Sbjct: 454 LVCWNSLMNGFSMHGKAKEVMSIFESL-------MRTRLK------PDFISFTSLLSACG 500
Query: 245 EAGQTLNAYKLLTQLADS-GVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDS 303
+ G T +K +++ G+ P ++ Y+ ++N +AG + A+ L K++ + PDS
Sbjct: 501 QVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFE---PDS 557
Query: 304 VTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEP 336
+G L++ R++ D +I L H+ EP
Sbjct: 558 CVWGALLNSC-RLQNNVDLAEIAAEKLFHL-EP 588
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 95/451 (21%), Positives = 181/451 (40%), Gaps = 80/451 (17%)
Query: 48 YSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMI 107
+SSLI KA+ + ++ ++ RM G++PD + + + + ++
Sbjct: 84 FSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSC 143
Query: 108 QRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVR 167
GL DA ++ + G++ AR + +S D T + L+C +KG +
Sbjct: 144 VSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSD----KDVVTCSALLCAYARKGCLE 199
Query: 168 EAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM---------------- 211
E + ++ME G + V++N +++G ++G EA ++F K+
Sbjct: 200 EVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVL 259
Query: 212 -EIGKSPSLFF-RLAQG-----------------------SDHVSDSVSLQKKVEHMCEA 246
+G S L RL G S HV +SL + E M EA
Sbjct: 260 PSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFE-MMEA 318
Query: 247 GQTLNAYKLLTQLADSGVVP----------------DIKTYNILINSFCKAGNMNGAFKL 290
G NAY +T L+ +G+V ++ ++ +I + G A +L
Sbjct: 319 G-VCNAY--ITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALEL 375
Query: 291 FKDLQLKGLSPDSVTYGTLIDGLYRVE-----REEDAFKIRDHMLKHVCEPSFAVYKALM 345
F+++Q+ G+ P+ VT +++ + R F +R H+L +V V AL+
Sbjct: 376 FREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNV-----HVGSALI 430
Query: 346 TWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKGEVERAIRGLLELDFRFR-D 404
+ +I+L+ ++ +P ++ N+L F + + + E R R
Sbjct: 431 DMYAKCGRINLSQIVF----NMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLK 486
Query: 405 FNLAPYSILLIGFCQAKKVDEALIIFSVLDE 435
+ ++ LL Q DE F ++ E
Sbjct: 487 PDFISFTSLLSACGQVGLTDEGWKYFKMMSE 517
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 140/328 (42%), Gaps = 43/328 (13%)
Query: 14 NVLLNGFCKQGKLEEAVSLL-RLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMI 72
N LL+ + G + A + ++ E+D L ++S+I+GF + + EA +LY M
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKD-----LVAWNSVINGFAENGKPEEALALYTEMN 81
Query: 73 KGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLD 132
GI PD +L + G + ++ MI+ GL + H N ++ + G+++
Sbjct: 82 SKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVE 141
Query: 133 HARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKL-GCFPSAVTFNAL 191
A++L E+ ++ + T LI + G +EA E+F ME G P +TF +
Sbjct: 142 EAKTLFDEMVD----KNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGI 197
Query: 192 INGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEH-------MC 244
+ G + E F +M + ++ ++EH +
Sbjct: 198 LYACSHCGMVKEGFEYFRRMR-------------------EEYKIEPRIEHFGCMVDLLA 238
Query: 245 EAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSV 304
AGQ AY+ + + + P++ + L+ + G+ + A F +Q+ L P+
Sbjct: 239 RAGQVKKAYEYIKSMP---MQPNVVIWRTLLGACTVHGDSDLA--EFARIQILQLEPNHS 293
Query: 305 TYGTLIDGLYRVE-REEDAFKIRDHMLK 331
L+ +Y E R D KIR ML+
Sbjct: 294 GDYVLLSNMYASEQRWSDVQKIRKQMLR 321
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 140/328 (42%), Gaps = 43/328 (13%)
Query: 14 NVLLNGFCKQGKLEEAVSLL-RLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMI 72
N LL+ + G + A + ++ E+D L ++S+I+GF + + EA +LY M
Sbjct: 160 NSLLHLYANCGDVASAYKVFDKMPEKD-----LVAWNSVINGFAENGKPEEALALYTEMN 214
Query: 73 KGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLD 132
GI PD +L + G + ++ MI+ GL + H N ++ + G+++
Sbjct: 215 SKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVE 274
Query: 133 HARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKL-GCFPSAVTFNAL 191
A++L E+ ++ + T LI + G +EA E+F ME G P +TF +
Sbjct: 275 EAKTLFDEMVD----KNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGI 330
Query: 192 INGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEH-------MC 244
+ G + E F +M + ++ ++EH +
Sbjct: 331 LYACSHCGMVKEGFEYFRRMR-------------------EEYKIEPRIEHFGCMVDLLA 371
Query: 245 EAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSV 304
AGQ AY+ + + + P++ + L+ + G+ + A F +Q+ L P+
Sbjct: 372 RAGQVKKAYEYIKSMP---MQPNVVIWRTLLGACTVHGDSDLA--EFARIQILQLEPNHS 426
Query: 305 TYGTLIDGLYRVE-REEDAFKIRDHMLK 331
L+ +Y E R D KIR ML+
Sbjct: 427 GDYVLLSNMYASEQRWSDVQKIRKQMLR 454
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 148/345 (42%), Gaps = 60/345 (17%)
Query: 64 AHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLL-PDAHCYNAII 122
AH ++ ++ K +V ++ ++RG + G A ++ EM GL+ PD H Y +I
Sbjct: 72 AHKVFSKIEKP---INVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 123 KGFCDIGQLDHARSLHVEI--SGHDGL---HDTCTHTILICEMCKKGMVREAQEMFNQME 177
K + + ++H + SG L ++ H C G V A ++F++M
Sbjct: 129 KAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANC-----GDVASAYKVFDKMP 183
Query: 178 KLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEI-GKSPSLFFRLAQGSDHVS-DSVS 235
+ V +N++ING + GK +EA L+ +M G P F ++ S +++
Sbjct: 184 E----KDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALT 239
Query: 236 LQKKVE-HMCEAGQTLNAYK---LLTQLADSGVVPDIKT------------YNILINSFC 279
L K+V +M + G T N + LL A G V + KT + LI
Sbjct: 240 LGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLA 299
Query: 280 KAGNMNGAFKLFKDLQ-LKGLSPDSVTY----------GTLIDGLYRVEREEDAFKIRDH 328
G A +LFK ++ +GL P +T+ G + +G R + +KI
Sbjct: 300 VNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKI--- 356
Query: 329 MLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDN 373
EP + ++ L R ++ A+ EY+KS+P + N
Sbjct: 357 ------EPRIEHFGCMVDLLARAGQVKKAY----EYIKSMPMQPN 391
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 175/433 (40%), Gaps = 34/433 (7%)
Query: 3 MRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYN 62
++ F+ D T+ +L+ F + G+++ S+ L++ G I Y+SLI + +
Sbjct: 115 IKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVD 174
Query: 63 EAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAII 122
A L+ M G P V+ Y ++ L +GRV EA +++ EM++ + P+ H Y ++
Sbjct: 175 GAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLM 234
Query: 123 KGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCF 182
+ G+ + A + ++ D ILI + K G + M++ G
Sbjct: 235 EYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGVV 294
Query: 183 PSAVTFNALINGLCKAGKLDE------AHLLFYKM---EIGKSPSLFFRLAQGSD--HVS 231
F + L AG+ D+ +H+ + +I ++P+ + SD V
Sbjct: 295 LRYPIFVEALETLKAAGESDDLLREVNSHISVESLCSSDIDETPTAEVNDTKNSDDSRVI 354
Query: 232 DSVSLQKKVEHMCEAGQTLNAYK-LLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKL 290
SV L K Q L A LL Q+ D + D + +I + C GA
Sbjct: 355 SSVLLMK---------QNLVAVDILLNQMRDRNIKLDSFVVSAIIETNCDRCRTEGASLA 405
Query: 291 FKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKA--LMTWL 348
F G+ Y LI R ++ M+K + S Y+ L+ L
Sbjct: 406 FDYSLEMGIHLKKSAYLALIGNFLRSNELPKVIEVVKEMVK--AQHSLGCYQGAMLIHRL 463
Query: 349 CRGKKISLAFSLYLEYLKSLPGRDNDSINA----LEEYFMKGEVERAIRGLLELDFRFRD 404
G++ LA ++ L D + A ++ Y G E+A++ L E+ R
Sbjct: 464 GFGRRPRLAADVF-----DLLPDDQKGVAAYTALMDVYISAGSPEKAMKILREMREREIM 518
Query: 405 FNLAPYSILLIGF 417
+L Y +LL G
Sbjct: 519 PSLGTYDVLLSGL 531
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 155/351 (44%), Gaps = 44/351 (12%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
F+ + N L++ FCK G L++A ++ + R + ++S++ G+ R +EA
Sbjct: 178 FEMSVRIGNALVDMFCKCGCLDKARAVFDSM----RDKNVKCWTSMVFGYVSTGRIDEAR 233
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
L+ R + DV+L+ M+ G R EA+++F M G+ PD +++ G
Sbjct: 234 VLFER----SPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGC 289
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
G L+ + +H I+ + D T L+ K G + A E+F ++++
Sbjct: 290 AQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKE----RDT 345
Query: 186 VTFNALINGLCKAGKLDEAHLLFYKME---IGKSPSLFFRLAQGSDH------------- 229
++ +LI GL G A L+Y+ME + F + +H
Sbjct: 346 ASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHS 405
Query: 230 VSDSVSLQKKVEH-------MCEAGQTLNAYKLLTQL---ADSGVVPDIKTYNILINSFC 279
+++ ++Q K EH +C AG A +L+ ++ +D +VP Y L+++
Sbjct: 406 MTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVP---VYCSLLSAAR 462
Query: 280 KAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLY-RVEREEDAFKIRDHM 329
GN+ A ++ + L+ +S S TL+ +Y R ED +R M
Sbjct: 463 NYGNVKIAERVAEKLEKVEVSDSSAH--TLLASVYASANRWEDVTNVRRKM 511
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 89/425 (20%), Positives = 167/425 (39%), Gaps = 89/425 (20%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDG---------RGIRLSGY--------- 48
QRD+ ++N +++G+ G + E + LL + DG + +SG
Sbjct: 207 QRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRM 266
Query: 49 -----------------SSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLS 91
++LI + K + ++ R+++ DV+ + +M+ GL
Sbjct: 267 LHCQIVKTGFDVDMHLKTALITMYLKCGKEEASY----RVLETIPNKDVVCWTVMISGLM 322
Query: 92 NEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTC 151
GR +A+ +F+EM+Q G + +++ +G D S+H + H DT
Sbjct: 323 RLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTP 382
Query: 152 THTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKM 211
LI K G + ++ +F +M + V++NA+I+G + L +A LLF +M
Sbjct: 383 ALNSLITMYAKCGHLDKSLVIFERMNE----RDLVSWNAIISGYAQNVDLCKALLLFEEM 438
Query: 212 EIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLL-----------TQLA 260
+ F+ Q D + LQ C + L KL+ L
Sbjct: 439 K--------FKTVQQVDSFTVVSLLQA-----CSSAGALPVGKLIHCIVIRSFIRPCSLV 485
Query: 261 DSGVV---------------------PDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGL 299
D+ +V D+ ++ ILI + G + A +++ + G+
Sbjct: 486 DTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGM 545
Query: 300 SPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHV-CEPSFAVYKALMTWLCRGKKISLAF 358
P+ V + ++ + KI M++ EP+ ++ LCR K+I AF
Sbjct: 546 EPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAF 605
Query: 359 SLYLE 363
Y E
Sbjct: 606 KFYKE 610
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 102/433 (23%), Positives = 184/433 (42%), Gaps = 37/433 (8%)
Query: 1 MWMRRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARR 60
M + D TF LL +L +S+ + + +G SSL++ + K
Sbjct: 37 MLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGL 96
Query: 61 YNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNA 120
A ++ M + DV+ + M+ S G VGEA + EM +G+ P
Sbjct: 97 LAHARKVFEEMRE----RDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLE 152
Query: 121 IIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
++ G +I QL V I G D D ++ CK V +A+++F+QME+
Sbjct: 153 MLSGVLEITQLQCLHDFAV-IYGFDC--DIAVMNSMLNLYCKCDHVGDAKDLFDQMEQ-- 207
Query: 181 CFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKV 240
V++N +I+G G + E L Y+M G R Q + S SVS
Sbjct: 208 --RDMVSWNTMISGYASVGNMSEILKLLYRMR-GDG----LRPDQQTFGASLSVS----- 255
Query: 241 EHMC--EAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKG 298
MC E G+ L+ Q+ +G D+ LI + K G ++++ + + K
Sbjct: 256 GTMCDLEMGRMLHC-----QIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNK- 309
Query: 299 LSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAF 358
D V + +I GL R+ R E A + ML+ + S +++ + L
Sbjct: 310 ---DVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGA 366
Query: 359 SLYLEYLKSLPGRDNDSINALEEYFMK-GEVERAIRGLLELDFRFRDFNLAPYSILLIGF 417
S++ L+ D ++N+L + K G ++++ L + R + +L ++ ++ G+
Sbjct: 367 SVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKS----LVIFERMNERDLVSWNAIISGY 422
Query: 418 CQAKKVDEALIIF 430
Q + +AL++F
Sbjct: 423 AQNVDLCKALLLF 435
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 78/399 (19%), Positives = 166/399 (41%), Gaps = 35/399 (8%)
Query: 90 LSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHD 149
LS+ G + + F+ M+ LLPD + +++K + +L S+H ++ + D
Sbjct: 21 LSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSD 80
Query: 150 TCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFY 209
+ L+ K G++ A+++F +M + V + A+I +AG + EA L
Sbjct: 81 FYISSSLVNLYAKFGLLAHARKVFEEMRE----RDVVHWTAMIGCYSRAGIVGEACSLVN 136
Query: 210 KME---IGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVP 266
+M I P + G ++ Q L+ + ++ G
Sbjct: 137 EMRFQGIKPGPVTLLEMLSGVLEITQL--------------QCLHDFAVIY-----GFDC 177
Query: 267 DIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIR 326
DI N ++N +CK ++ A LF ++ + D V++ T+I G V + K+
Sbjct: 178 DIAVMNSMLNLYCKCDHVGDAKDLFDQMEQR----DMVSWNTMISGYASVGNMSEILKLL 233
Query: 327 DHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSINALEEYFMKG 386
M P + A ++ + + L+ + +K+ D AL ++K
Sbjct: 234 YRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKC 293
Query: 387 EVERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCV 446
E A +LE + ++ +++++ G + + ++ALI+FS + + +++ +
Sbjct: 294 GKEEASYRVLE---TIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIA 350
Query: 447 HLISGLCAKRNLYD-AVVIFLYSLDKGFELGPKICKELL 484
+++ CA+ +D + Y L G+ L L+
Sbjct: 351 SVVAS-CAQLGSFDLGASVHGYVLRHGYTLDTPALNSLI 388
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 138/317 (43%), Gaps = 15/317 (4%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIR-LSGYSSLIDGFFKARRYNEAHSL 67
D F++++ + K G LEEA S+L +++ + + + ++ + K ++ L
Sbjct: 592 DRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHL 651
Query: 68 YGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCD 127
Y R+ K GI + +Y ++ + + E F EMI+ G P+ +N ++ +
Sbjct: 652 YYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGK 711
Query: 128 IGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVT 187
L + H G+ D ++ +I K M+ G S
Sbjct: 712 AKLFKKVNELFLLAKRH-GVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEA 770
Query: 188 FNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAG 247
+N L++ K ++++ + +M+ KS S G DH + ++ + E G
Sbjct: 771 YNTLLDAYGKDKQMEKFRSILKRMK--KSTS-------GPDHYTYNI----MINIYGEQG 817
Query: 248 QTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYG 307
+L +L +SG+ PD+ +YN LI ++ G + A L K+++ + + PD VTY
Sbjct: 818 WIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYT 877
Query: 308 TLIDGLYRVEREEDAFK 324
L+ L R + +A K
Sbjct: 878 NLVTALRRNDEFLEAIK 894
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 84/172 (48%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D+ ++N ++ + K S ++ ++ DG + L Y++L+D + K ++ + S+
Sbjct: 732 DVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSIL 791
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
RM K PD Y IM+ +G + E + E+ + GL PD YN +IK +
Sbjct: 792 KRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIG 851
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLG 180
G ++ A L E+ G + + D T+T L+ + + EA + M+++G
Sbjct: 852 GMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMG 903
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 160/414 (38%), Gaps = 63/414 (15%)
Query: 21 CKQ-GKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKGGILPD 79
CK+ G+L +AV + I L S++ID + ++EA LY + G++ D
Sbjct: 533 CKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLD 592
Query: 80 VILYAIMLRGLSNEGRVGEAVKMFAEMI-QRGLLPDAHCYNAIIKGF--CDIGQLDHARS 136
I ++I++R G + EA + M Q+ ++PD + + +++ + CD+ D +
Sbjct: 593 RIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQ--DKLQH 650
Query: 137 LHVEISGHDGLHDTCTHTILICEMCKKGM-VREAQEMFNQMEKLGCFPSAVTFNALINGL 195
L+ I G+H + C + + + E F +M + G P+ VTFN L++
Sbjct: 651 LYYRIR-KSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVY 709
Query: 196 CKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKL 255
KA + + LF
Sbjct: 710 GKAKLFKKVNELFL---------------------------------------------- 723
Query: 256 LTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYR 315
LA V D+ +YN +I ++ K + K++Q G S Y TL+D +
Sbjct: 724 ---LAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGK 780
Query: 316 VEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDS 375
++ E I M K P Y ++ I + E +S G D S
Sbjct: 781 DKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCS 840
Query: 376 INAL-EEYFMKGEVERAIRGLLELDFRFRDFNLAPYSILLIGFCQA-KKVDEAL 427
N L + Y + G VE A+ GL++ R N+ P + A ++ DE L
Sbjct: 841 YNTLIKAYGIGGMVEEAV-GLVK---EMRGRNIIPDKVTYTNLVTALRRNDEFL 890
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 142/334 (42%), Gaps = 50/334 (14%)
Query: 5 RFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEA 64
R + L + V+LN + +QGK+E A S+L +E G + Y++LI G+ K + A
Sbjct: 309 RVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAA 368
Query: 65 HSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKG 124
L+ R+ G+ PD Y M+ G EA + E+ + G P++ +I
Sbjct: 369 QGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINL 428
Query: 125 FCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCF-- 182
G D A +++G C ++ ++ G++ +A E +++ + C
Sbjct: 429 QAKYGDRDGAIKTIEDMTGIG-----CQYSSIL------GIILQAYEKVGKIDVVPCVLK 477
Query: 183 --------PSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSP--SLFFRL----AQGSD 228
+ +F++L+ K G +D+ L + + S S + L + S
Sbjct: 478 GSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESG 537
Query: 229 HVSDSVSLQKKVEHMCEAGQTLN-------------------AYKLLTQLADSGVVPDIK 269
++D+V K H E+ + +N A KL L SGVV D
Sbjct: 538 QLTDAV---KIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRI 594
Query: 270 TYNILINSFCKAGNMNGAFKLFKDL-QLKGLSPD 302
++I++ + KAG++ A + + + + K + PD
Sbjct: 595 GFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPD 628
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 1/199 (0%)
Query: 6 FQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAH 65
F + TFNVLL+ + K KL + V+ L LL + + + Y+++I + K + Y
Sbjct: 695 FTPNTVTFNVLLDVYGK-AKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMS 753
Query: 66 SLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGF 125
S M G + Y +L + ++ + + M + PD + YN +I +
Sbjct: 754 SAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIY 813
Query: 126 CDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSA 185
+ G +D + E+ D C++ LI GMV EA + +M P
Sbjct: 814 GEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDK 873
Query: 186 VTFNALINGLCKAGKLDEA 204
VT+ L+ L + + EA
Sbjct: 874 VTYTNLVTALRRNDEFLEA 892
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 89/196 (45%), Gaps = 1/196 (0%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
++AT +L+ + K +EEA + + G + S YSS+I + + R Y++A +
Sbjct: 244 NVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGI-VCESAYSSMITIYTRLRLYDKAEEVI 302
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
M + + + + +ML S +G++ A + M G P+ YN +I G+ I
Sbjct: 303 DLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKI 362
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
+++ A+ L + D ++ +I + EA+ + ++++ G P++
Sbjct: 363 FKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNL 422
Query: 189 NALINGLCKAGKLDEA 204
LIN K G D A
Sbjct: 423 FTLINLQAKYGDRDGA 438
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 50/103 (48%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D T+N+++N + +QG ++E +L+ L+ G G L Y++LI + EA L
Sbjct: 802 DHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLV 861
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGL 111
M I+PD + Y ++ L EA+K M Q G+
Sbjct: 862 KEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMGI 904
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 150/333 (45%), Gaps = 32/333 (9%)
Query: 14 NVLLNGFCKQGKLEEAVSLLRLLE-RDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMI 72
N L+N + G+++ AV + R ++ RD + ++S++ G+ + A + + +M
Sbjct: 275 NALVNAYAACGEMDIAVRIFRSMKARD-----VISWTSIVKGYVERGNLKLARTYFDQMP 329
Query: 73 KGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLD 132
+ D I + IM+ G G E++++F EM G++PD +++ +G L+
Sbjct: 330 ----VRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLE 385
Query: 133 HARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALI 192
+ I + +D LI K G +AQ++F+ M++ F T+ A++
Sbjct: 386 IGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKF----TWTAMV 441
Query: 193 NGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNA 252
GL G+ EA +F++M Q D ++ + +G A
Sbjct: 442 VGLANNGQGQEAIKVFFQM-------------QDMSIQPDDITYLGVLSACNHSGMVDQA 488
Query: 253 YKLLTQL-ADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLID 311
K ++ +D + P + Y +++ +AG + A+++ + + ++P+S+ +G L+
Sbjct: 489 RKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMP---MNPNSIVWGALL- 544
Query: 312 GLYRVEREEDAFKIRDHMLKHVCEPSFAVYKAL 344
G R+ +E ++ + + + AVY L
Sbjct: 545 GASRLHNDEPMAELAAKKILELEPDNGAVYALL 577
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/361 (21%), Positives = 159/361 (44%), Gaps = 30/361 (8%)
Query: 4 RRFQRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNE 63
RR + D+ ++N++++G+ + + EE++ LL +ER+ ++ K + +
Sbjct: 195 RRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDL 254
Query: 64 AHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIK 123
++ + + P + L ++ + G + AV++F M R D + +I+K
Sbjct: 255 CKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKAR----DVISWTSIVK 310
Query: 124 GFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFP 183
G+ + G L AR+ ++ + D + TI+I + G E+ E+F +M+ G P
Sbjct: 311 GYVERGNLKLARTYFDQMP----VRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIP 366
Query: 184 SAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPS----------LFFRL-----AQGSD 228
T +++ G L+ + ++ K + ++F+ AQ
Sbjct: 367 DEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVF 426
Query: 229 H---VSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMN 285
H D + V + GQ A K+ Q+ D + PD TY ++++ +G ++
Sbjct: 427 HDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVD 486
Query: 286 GAFKLFKDLQLKG-LSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKAL 344
A K F ++ + P V YG ++D L R ++A++I + K P+ V+ AL
Sbjct: 487 QARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEI---LRKMPMNPNSIVWGAL 543
Query: 345 M 345
+
Sbjct: 544 L 544
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 136/330 (41%), Gaps = 53/330 (16%)
Query: 48 YSSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNE-GRVGEAVKMFAEM 106
++++I G+ K E LY M+K G+ PD + +L GL + G + K+ +
Sbjct: 102 WNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHV 161
Query: 107 IQRGLLPDAHCYNAIIKGFCDIGQLDHAR------------SLHVEISGHDGLHD----- 149
++ GL + + NA++K + G +D AR S ++ ISG++ + +
Sbjct: 162 VKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESI 221
Query: 150 -------------TCTHTILICEMCKKGMVRE-AQEMFNQMEKLGCFPSAVTFNALINGL 195
T +L+ C K ++ + + + + PS NAL+N
Sbjct: 222 ELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAY 281
Query: 196 CKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKL 255
G++D A +F M+ D +S V+ E G KL
Sbjct: 282 AACGEMDIAVRIFRSMK-----------------ARDVISWTSIVKGYVERGN----LKL 320
Query: 256 LTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYR 315
D V D ++ I+I+ + +AG N + ++F+++Q G+ PD T +++
Sbjct: 321 ARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAH 380
Query: 316 VEREEDAFKIRDHMLKHVCEPSFAVYKALM 345
+ E I+ ++ K+ + V AL+
Sbjct: 381 LGSLEIGEWIKTYIDKNKIKNDVVVGNALI 410
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/427 (18%), Positives = 178/427 (41%), Gaps = 43/427 (10%)
Query: 78 PDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC-DIGQLDHARS 136
PDV+++ M++G S GE V+++ M++ G+ PD+H + ++ G D G L +
Sbjct: 97 PDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKK 156
Query: 137 LHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLC 196
LH + + L+ G++ A+ +F++ C ++N +I+G
Sbjct: 157 LHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRR----CKEDVFSWNLMISGYN 212
Query: 197 KAGKLDEAHLLFYKME---IGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEA------- 246
+ + +E+ L +ME + + + V D ++ E++ E
Sbjct: 213 RMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLR 272
Query: 247 --GQTLNAYK------LLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKG 298
+NAY + ++ S D+ ++ ++ + + GN+ A F + ++
Sbjct: 273 LENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVR- 331
Query: 299 LSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAF 358
D +++ +IDG R ++ +I M P +++T + +
Sbjct: 332 ---DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIG- 387
Query: 359 SLYLEYLKSLPGRD---NDSI--NAL-EEYFMKGEVERAIRGLLELDFRFRDFNLAPYSI 412
E++K+ ++ ND + NAL + YF G E+A + ++D R + ++
Sbjct: 388 ----EWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQR----DKFTWTA 439
Query: 413 LLIGFCQAKKVDEALIIFSVLDEFNININPTSCVHLISGLCAKRNLYDAVVIFLYSLDKG 472
+++G + EA+ +F + + +I + + + ++S C + D F +
Sbjct: 440 MVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSA-CNHSGMVDQARKFFAKMRSD 498
Query: 473 FELGPKI 479
+ P +
Sbjct: 499 HRIEPSL 505
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 142/350 (40%), Gaps = 89/350 (25%)
Query: 14 NVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIK 73
N LN + G + EA + LE ++++I G+ K R N+A L+ M K
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLE----ARNTVTWNTMISGYVKRREMNQARKLFDVMPK 99
Query: 74 GGILPDVILYAIMLRGLSNEGRV---GEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQ 130
DV+ + M+ G + G + EA K+F EM R D+ +N +I G+
Sbjct: 100 ----RDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSR----DSFSWNTMISGYA---- 147
Query: 131 LDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNA 190
K + EA +F +M + +AV+++A
Sbjct: 148 -------------------------------KNRRIGEALLLFEKMPER----NAVSWSA 172
Query: 191 LINGLCKAGKLDEAHLLFYKMEIGKSPSLFF---------RLAQGSDHVSDSVSLQKKVE 241
+I G C+ G++D A +LF KM + S L RL++ + + SL E
Sbjct: 173 MITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGRE 232
Query: 242 HMCEA-----------GQTLNAYKLLTQLAD-----------SGVVPDIKTYNILINSFC 279
+ A GQ A L Q+ D ++ ++N +I ++
Sbjct: 233 DLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYL 292
Query: 280 KAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHM 329
K G++ A LF ++ + D++++ T+IDG V R EDAF + M
Sbjct: 293 KVGDVVSARLLFDQMKDR----DTISWNTMIDGYVHVSRMEDAFALFSEM 338
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 135/308 (43%), Gaps = 25/308 (8%)
Query: 7 QRDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHS 66
RD ++N++++G+ G +E A E+ +S ++S+I + K + Y EA
Sbjct: 340 NRDAHSWNMMVSGYASVGNVELA---RHYFEKTPEKHTVS-WNSIIAAYEKNKDYKEAVD 395
Query: 67 LYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
L+ RM G PD +L + + ++M +++ + ++PD +NA+I +
Sbjct: 396 LFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMH-QIVVKTVIPDVPVHNALITMYS 454
Query: 127 DIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAV 186
G++ +R + E+ + T +I G EA +F M+ G +PS +
Sbjct: 455 RCGEIMESRRIFDEMKLK---REVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHI 511
Query: 187 TFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEA 246
TF +++N AG +DEA F M +++ +H S V++
Sbjct: 512 TFVSVLNACAHAGLVDEAKAQFVSM------MSVYKIEPQMEHYSSLVNVTSG------Q 559
Query: 247 GQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTY 306
GQ A ++T + PD + L+++ C+ N G + + + L P+S T
Sbjct: 560 GQFEEAMYIITSMP---FEPDKTVWGALLDA-CRIYNNVGLAHVAAE-AMSRLEPESSTP 614
Query: 307 GTLIDGLY 314
L+ +Y
Sbjct: 615 YVLLYNMY 622
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 161/382 (42%), Gaps = 55/382 (14%)
Query: 7 QRDLATFNVLLNGFCKQGK---LEEAVSLL-RLLERDGRGIRLSGYSSLIDGFFKARRYN 62
+RD+ T+N +++G+ G LEEA L + RD ++++I G+ K RR
Sbjct: 99 KRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDS-----FSWNTMISGYAKNRRIG 153
Query: 63 EAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAII 122
EA L+ +M + + + ++ M+ G G V AV +F +M + D+ A++
Sbjct: 154 EALLLFEKMPE----RNAVSWSAMITGFCQNGEVDSAVVLFRKMP----VKDSSPLCALV 205
Query: 123 KGFCDIGQLDHARSLHVE----ISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEK 178
G +L A + + +SG + L + LI ++G V A+ +F+Q+
Sbjct: 206 AGLIKNERLSEAAWVLGQYGSLVSGREDL--VYAYNTLIVGYGQRGQVEAARCLFDQIPD 263
Query: 179 L------GCF-----PSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGS 227
L G F + V++N++I K G + A LLF +M+ + S + + G
Sbjct: 264 LCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTIS-WNTMIDGY 322
Query: 228 DHVS---------------DSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYN 272
HVS D+ S V G A + + V ++N
Sbjct: 323 VHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTV----SWN 378
Query: 273 ILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKH 332
+I ++ K + A LF + ++G PD T +L+ + ++ ++K
Sbjct: 379 SIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKT 438
Query: 333 VCEPSFAVYKALMTWLCRGKKI 354
V P V+ AL+T R +I
Sbjct: 439 VI-PDVPVHNALITMYSRCGEI 459
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 94/201 (46%), Gaps = 13/201 (6%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D ++ +L+ +C GK E+A+ ++R +E G + + +++++ +K +EA SL+
Sbjct: 173 DKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLW 232
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEG--RVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFC 126
M+ G D +Y + L + E RV E + EM GL PD YN ++ +C
Sbjct: 233 IEMVNKGCDLDNTVYNVRLMNAAKESPERVKE---LMEEMSSVGLKPDTVSYNYLMTAYC 289
Query: 127 DIGQLDHARSLHVEISGHDGLH--DTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPS 184
G + A+ + ++GL + T LI +C G+ + +F + + P
Sbjct: 290 VKGMMSEAKKV------YEGLEQPNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKIPD 343
Query: 185 AVTFNALINGLCKAGKLDEAH 205
T L GL K ++++A
Sbjct: 344 FKTCKHLTEGLVKNNRMEDAR 364
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 114/265 (43%), Gaps = 25/265 (9%)
Query: 57 KARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAH 116
K++R+++ +L + + ++R A+KMF EM + G
Sbjct: 79 KSQRFSDIEALIESHKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVV 138
Query: 117 CYNAIIKGFCDIGQLDHARSLHVEISG--HDGLHDTCTHTILICEMCKKGMVREAQEMFN 174
+NA++ + L E ++ D ++ +LI C G +A E+
Sbjct: 139 SFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMR 198
Query: 175 QMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSV 234
ME G + + F ++ L K G +DEA L+ +M + K L D+ +V
Sbjct: 199 DMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEM-VNKGCDL--------DNTVYNV 249
Query: 235 SLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDL 294
L + E +L+ +++ G+ PD +YN L+ ++C G M+ A K+++ L
Sbjct: 250 RLMNAAKESPE-----RVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGL 304
Query: 295 QLKGLSPDSVTYGTL-----IDGLY 314
+ P++ T+ TL I+GLY
Sbjct: 305 E----QPNAATFRTLIFHLCINGLY 325
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 123/314 (39%), Gaps = 62/314 (19%)
Query: 154 TILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEI 213
+ LI + M A +MF +M+KLG + V+FNAL+ C L E
Sbjct: 106 STLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALL-AACLHSDLFE---------- 154
Query: 214 GKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNI 273
+ P LF Q ++++ PD +Y +
Sbjct: 155 -RVPQLFDEFPQRYNNIT----------------------------------PDKISYGM 179
Query: 274 LINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHV 333
LI S+C +G A ++ +D+++KG+ + + T++ LY+ ++A + M+
Sbjct: 180 LIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKG 239
Query: 334 CEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSIN---ALEEYFMKG---E 387
C+ VY + + K+ +E + S+ G D+++ + Y +KG E
Sbjct: 240 CDLDNTVYNVRL--MNAAKESPERVKELMEEMSSV-GLKPDTVSYNYLMTAYCVKGMMSE 296
Query: 388 VERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEALIIFSVLDEFNININPTSCVH 447
++ GL + N A + L+ C D+ L +F + + +C H
Sbjct: 297 AKKVYEGLEQP-------NAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFKTCKH 349
Query: 448 LISGLCAKRNLYDA 461
L GL + DA
Sbjct: 350 LTEGLVKNNRMEDA 363
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 129/304 (42%), Gaps = 24/304 (7%)
Query: 9 DLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLY 68
D +LN F L++ S+ + + G I SL + K + A L+
Sbjct: 221 DWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILF 280
Query: 69 GRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDI 128
+M P++IL+ M+ G + G EA+ MF EMI + + PD + I +
Sbjct: 281 DKMKS----PNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQV 336
Query: 129 GQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTF 188
G L+ ARS++ + D D + LI K G V A+ +F++ V +
Sbjct: 337 GSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDR----DVVVW 392
Query: 189 NALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQGSDHVSDSVSLQKKVEHMCEAGQ 248
+A+I G G+ EA L+ ME +G H +D V+ + +G
Sbjct: 393 SAMIVGYGLHGRAREAISLYRAME------------RGGVHPND-VTFLGLLMACNHSGM 439
Query: 249 TLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGT 308
+ ++AD + P + Y +I+ +AG+++ A+++ K + ++ P +G
Sbjct: 440 VREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQ---PGVTVWGA 496
Query: 309 LIDG 312
L+
Sbjct: 497 LLSA 500
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 131/300 (43%), Gaps = 29/300 (9%)
Query: 49 SSLIDGFFKARRYNEAHSLYGRMIKGGILPD--VILYAIMLRGLSNEGRVGEAVKMFAEM 106
+ LI + K RR A +++ +G LP+ ++ + ++ + G EA+++F++M
Sbjct: 158 NGLIALYAKCRRLGSARTVF----EGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQM 213
Query: 107 IQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKK-GM 165
+ + PD +++ F + L RS+H + GL I + M K G
Sbjct: 214 RKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKM-GLEIEPDLLISLNTMYAKCGQ 272
Query: 166 VREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEIGKSPSLFFRLAQ 225
V A+ +F++M+ P+ + +NA+I+G K G EA +F++M I K
Sbjct: 273 VATAKILFDKMKS----PNLILWNAMISGYAKNGYAREAIDMFHEM-INK---------- 317
Query: 226 GSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMN 285
D D++S+ + + G A + + S D+ + LI+ F K G++
Sbjct: 318 --DVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVE 375
Query: 286 GAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALM 345
GA +F + L D V + +I G R +A + M + P+ + L+
Sbjct: 376 GARLVFD----RTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLL 431
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 62/117 (52%)
Query: 243 MCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPD 302
+C+ G A KL + D G +P++ Y ++ +FCKA + A ++F+ +Q G++P+
Sbjct: 141 LCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPN 200
Query: 303 SVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFS 359
+ +YG L+ GLY +DA ML+ P+ + L+ LCR K + A S
Sbjct: 201 AFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQS 257
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 67/122 (54%)
Query: 15 VLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKG 74
+L+G CK G ++EA+ L L+ G + Y+++++ F KA + +A ++ +M
Sbjct: 136 AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNN 195
Query: 75 GILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHA 134
GI P+ Y ++++GL N + +AV +EM++ G P+ + ++ C + ++ A
Sbjct: 196 GIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQA 255
Query: 135 RS 136
+S
Sbjct: 256 QS 257
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 79/143 (55%), Gaps = 3/143 (2%)
Query: 63 EAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAII 122
++ ++ +M +GG++P+ + ML GL +G V EA+K+F M +G +P+ Y A++
Sbjct: 117 DSDEIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVV 173
Query: 123 KGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCF 182
+ FC +++ A+ + ++ + + ++ +L+ + M+ +A ++M + G
Sbjct: 174 EAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHS 233
Query: 183 PSAVTFNALINGLCKAGKLDEAH 205
P+ TF L++ LC+ +++A
Sbjct: 234 PNVPTFVELVDALCRVKGVEQAQ 256
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 66/133 (49%), Gaps = 4/133 (3%)
Query: 50 SLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQR 109
+++DG K EA L+G M G +P+V++Y ++ ++ +A ++F +M
Sbjct: 136 AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNN 195
Query: 110 GLLPDAHCYNAIIKGFCDIGQLDHARSLHVEI--SGHDGLHDTCTHTILICEMCKKGMVR 167
G+ P+A Y +++G + LD A + E+ SGH + T L+ +C+ V
Sbjct: 196 GIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHS--PNVPTFVELVDALCRVKGVE 253
Query: 168 EAQEMFNQMEKLG 180
+AQ + + + G
Sbjct: 254 QAQSAIDTLNQKG 266
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 67/142 (47%), Gaps = 15/142 (10%)
Query: 160 MCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKME-IGKSPS 218
+CK G+V+EA ++F M G P V + A++ CKA K+++A +F KM+ G +P+
Sbjct: 141 LCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPN 200
Query: 219 LFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSF 278
F S V+ + +A +++ +SG P++ T+ L+++
Sbjct: 201 AF--------------SYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDAL 246
Query: 279 CKAGNMNGAFKLFKDLQLKGLS 300
C+ + A L KG +
Sbjct: 247 CRVKGVEQAQSAIDTLNQKGFA 268
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 62/117 (52%)
Query: 243 MCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPD 302
+C+ G A KL + D G +P++ Y ++ +FCKA + A ++F+ +Q G++P+
Sbjct: 141 LCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPN 200
Query: 303 SVTYGTLIDGLYRVEREEDAFKIRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFS 359
+ +YG L+ GLY +DA ML+ P+ + L+ LCR K + A S
Sbjct: 201 AFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQS 257
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 67/122 (54%)
Query: 15 VLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSLYGRMIKG 74
+L+G CK G ++EA+ L L+ G + Y+++++ F KA + +A ++ +M
Sbjct: 136 AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNN 195
Query: 75 GILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHA 134
GI P+ Y ++++GL N + +AV +EM++ G P+ + ++ C + ++ A
Sbjct: 196 GIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQA 255
Query: 135 RS 136
+S
Sbjct: 256 QS 257
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 79/143 (55%), Gaps = 3/143 (2%)
Query: 63 EAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAII 122
++ ++ +M +GG++P+ + ML GL +G V EA+K+F M +G +P+ Y A++
Sbjct: 117 DSDEIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVV 173
Query: 123 KGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCF 182
+ FC +++ A+ + ++ + + ++ +L+ + M+ +A ++M + G
Sbjct: 174 EAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHS 233
Query: 183 PSAVTFNALINGLCKAGKLDEAH 205
P+ TF L++ LC+ +++A
Sbjct: 234 PNVPTFVELVDALCRVKGVEQAQ 256
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 66/133 (49%), Gaps = 4/133 (3%)
Query: 50 SLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQR 109
+++DG K EA L+G M G +P+V++Y ++ ++ +A ++F +M
Sbjct: 136 AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNN 195
Query: 110 GLLPDAHCYNAIIKGFCDIGQLDHARSLHVEI--SGHDGLHDTCTHTILICEMCKKGMVR 167
G+ P+A Y +++G + LD A + E+ SGH + T L+ +C+ V
Sbjct: 196 GIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHS--PNVPTFVELVDALCRVKGVE 253
Query: 168 EAQEMFNQMEKLG 180
+AQ + + + G
Sbjct: 254 QAQSAIDTLNQKG 266
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 67/142 (47%), Gaps = 15/142 (10%)
Query: 160 MCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKME-IGKSPS 218
+CK G+V+EA ++F M G P V + A++ CKA K+++A +F KM+ G +P+
Sbjct: 141 LCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPN 200
Query: 219 LFFRLAQGSDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPDIKTYNILINSF 278
F S V+ + +A +++ +SG P++ T+ L+++
Sbjct: 201 AF--------------SYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDAL 246
Query: 279 CKAGNMNGAFKLFKDLQLKGLS 300
C+ + A L KG +
Sbjct: 247 CRVKGVEQAQSAIDTLNQKGFA 268
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 142/336 (42%), Gaps = 38/336 (11%)
Query: 49 SSLIDGFFKARRYNEAHSLYGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQ 108
SS+++ + K + +EA L+G+M K DVI + M+ G + G+ +AV+ + EM
Sbjct: 155 SSVLNLYMKCGKMDEAEVLFGKMAK----RDVICWTTMVTGFAQAGKSLKAVEFYREMQN 210
Query: 109 RGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVRE 168
G D +++ D+G RS+H + + T L+ K G +
Sbjct: 211 EGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEV 270
Query: 169 AQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKME-IGKSPSLFF------ 221
A +F++M F +AV++ +LI+G + G ++A +M+ +G P L
Sbjct: 271 ASRVFSRM----MFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLV 326
Query: 222 ------RLAQG--------SDHVSDSVSLQKKVEHMCEAGQTLNAYKLLTQLADSGVVPD 267
L G HV D V+ ++ + G ++ ++ + D
Sbjct: 327 ACSQVGSLKTGRLVHCYILKRHVLDRVTATALMDMYSKCGALSSSREIFEHVGR----KD 382
Query: 268 IKTYNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYR---VEREEDAFK 324
+ +N +I+ + GN LF + + PD T+ +L+ L VE+ + F
Sbjct: 383 LVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFS 442
Query: 325 IRDHMLKHVCEPSFAVYKALMTWLCRGKKISLAFSL 360
+ + K+ +PS Y L+ L R ++ A +
Sbjct: 443 VMIN--KYKIQPSEKHYVCLIDLLARAGRVEEALDM 476
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 98/204 (48%), Gaps = 6/204 (2%)
Query: 8 RDLATFNVLLNGFCKQGKLEEAVSLLRLLERDGRGIRLSGYSSLIDGFFKARRYNEAHSL 67
+D+ +N LL G+ K G+++EA SLL ++ R ++ +I G+ K+ R +EA +
Sbjct: 180 KDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVR--NEVSWTCVISGYAKSGRASEAIEV 237
Query: 68 YGRMIKGGILPDVILYAIMLRGLSNEGRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCD 127
+ RM+ + PD + +L ++ G + ++ + + RG+ NA+I +
Sbjct: 238 FQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAK 297
Query: 128 IGQLDHARSLHVEISGHDGLHDTCTHTILICEMCKKGMVREAQEMFNQMEKLGCFPSAVT 187
G + A + ++ + T T +I + G EA MFN+M K G P+ VT
Sbjct: 298 SGNITKALDVFECVNERN----VVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVT 353
Query: 188 FNALINGLCKAGKLDEAHLLFYKM 211
F A+++ G +D LF M
Sbjct: 354 FIAILSACSHVGWVDLGKRLFNSM 377
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 147/339 (43%), Gaps = 37/339 (10%)
Query: 94 GRVGEAVKMFAEMIQRGLLPDAHCYNAIIKGFCDIGQLDHARSLHVEISGHDGLHDTCTH 153
G +G+A KMF EM L+ D + +NA++ G+ +G++D ARSL + + + +
Sbjct: 165 GGLGDARKMFDEM----LVKDVNVWNALLAGYGKVGEMDEARSLLEMMPC--WVRNEVSW 218
Query: 154 TILICEMCKKGMVREAQEMFNQMEKLGCFPSAVTFNALINGLCKAGKLDEAHLLFYKMEI 213
T +I K G EA E+F +M P VT A+++ G L E+
Sbjct: 219 TCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSL----------EL 268
Query: 214 GKSPSLFFRLAQGSDH--VSDSVSLQKKVEHM-CEAGQTLNAYKLLTQLADSGVVPDIKT 270
G+ R+ DH ++ +VSL V M ++G A + + + VV T
Sbjct: 269 GE------RICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVV----T 318
Query: 271 YNILINSFCKAGNMNGAFKLFKDLQLKGLSPDSVTYGTLIDGLYRVEREEDAFKIRDHM- 329
+ +I G+ A +F + G+ P+ VT+ ++ V + ++ + M
Sbjct: 319 WTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMR 378
Query: 330 LKHVCEPSFAVYKALMTWLCRGKKISLAFSLYLEYLKSLPGRDNDSI--NALEEYFMKGE 387
K+ P+ Y ++ L R K+ A E +KS+P + N +I + L + +
Sbjct: 379 SKYGIHPNIEHYGCMIDLLGRAGKLREAD----EVIKSMPFKANAAIWGSLLAASNVHHD 434
Query: 388 VERAIRGLLELDFRFRDFNLAPYSILLIGFCQAKKVDEA 426
+E R L EL + N Y +L + + DE+
Sbjct: 435 LELGERALSEL-IKLEPNNSGNYMLLANLYSNLGRWDES 472