Miyakogusa Predicted Gene

Lj0g3v0311159.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0311159.1 tr|Q10L30|Q10L30_ORYSJ
Endonuclease/Exonuclease/phosphatase family protein, expressed
OS=Oryza sativ,76.92,0.00001, ,CUFF.20989.1
         (34 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G21530.1 | Symbols:  | DNAse I-like superfamily protein | chr...    51   1e-07
AT2G48030.1 | Symbols:  | DNAse I-like superfamily protein | chr...    48   1e-06

>AT3G21530.1 | Symbols:  | DNAse I-like superfamily protein |
           chr3:7582828-7584448 REVERSE LENGTH=458
          Length = 458

 Score = 51.2 bits (121), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 22/26 (84%), Positives = 23/26 (88%)

Query: 1   MKYVFAESWASEYLNVILSKWPIKRW 26
           MKYVFAESWA EY N ILSKWPIK+W
Sbjct: 218 MKYVFAESWAPEYGNAILSKWPIKKW 243


>AT2G48030.1 | Symbols:  | DNAse I-like superfamily protein |
           chr2:19647834-19649988 REVERSE LENGTH=438
          Length = 438

 Score = 48.1 bits (113), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/24 (83%), Positives = 20/24 (83%)

Query: 1   MKYVFAESWASEYLNVILSKWPIK 24
           M YVFAESWA EY N ILSKWPIK
Sbjct: 194 MNYVFAESWAPEYGNAILSKWPIK 217