Miyakogusa Predicted Gene

Lj0g3v0311139.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0311139.1 tr|Q177B0|Q177B0_AEDAE AAEL006208-PA (Fragment)
OS=Aedes aegypti GN=AAEL006208 PE=4 SV=1,25.93,7, ,CUFF.20990.1
         (122 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G14990.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   196   4e-51
AT1G14990.2 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   187   1e-48

>AT1G14990.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: endomembrane
           system; EXPRESSED IN: 22 plant structures; EXPRESSED
           DURING: 13 growth stages; Has 34 Blast hits to 34
           proteins in 12 species: Archae - 0; Bacteria - 0;
           Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other
           Eukaryotes - 0 (source: NCBI BLink). |
           chr1:5167354-5168151 REVERSE LENGTH=122
          Length = 122

 Score =  196 bits (497), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 87/122 (71%), Positives = 102/122 (83%)

Query: 1   MRLYDQFTEILKIQKFRRIVSYTGFYCFATLISYAYVSNTTRAGYSRADQFYASYPAGTE 60
           M + D  +E++KIQK RR VSY GFYCF   +++ Y +NTTRAGYSR DQFYASYPAGTE
Sbjct: 1   MMILDVCSEVIKIQKLRRAVSYAGFYCFTAALTFFYTNNTTRAGYSRGDQFYASYPAGTE 60

Query: 61  LLTDTTKLYKAALGNCFEVEEWGPFEFFVMAKHFERQGKAPYAYHAQYMAQLLSHGQIDG 120
           LLTDT KLYKAALGNC+E E+WGP EF +MAKHF+RQGK+PY YH+QYMA LLS GQ+DG
Sbjct: 61  LLTDTAKLYKAALGNCYESEDWGPVEFCIMAKHFDRQGKSPYVYHSQYMAHLLSQGQLDG 120

Query: 121 SG 122
           SG
Sbjct: 121 SG 122


>AT1G14990.2 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: endomembrane
           system; EXPRESSED IN: 22 plant structures; EXPRESSED
           DURING: 13 growth stages. | chr1:5167354-5168151 REVERSE
           LENGTH=132
          Length = 132

 Score =  187 bits (476), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 87/132 (65%), Positives = 102/132 (77%), Gaps = 10/132 (7%)

Query: 1   MRLYDQFTEILKIQKFRRIVSYTGFYCFATLISYAYVSNTTRAGYSRADQFYASYPAGTE 60
           M + D  +E++KIQK RR VSY GFYCF   +++ Y +NTTRAGYSR DQFYASYPAGTE
Sbjct: 1   MMILDVCSEVIKIQKLRRAVSYAGFYCFTAALTFFYTNNTTRAGYSRGDQFYASYPAGTE 60

Query: 61  LLTDTTKLYKAALGNCFEVEEWGPFEFFVMAKHFERQGKAPYAYHA----------QYMA 110
           LLTDT KLYKAALGNC+E E+WGP EF +MAKHF+RQGK+PY YH+          QYMA
Sbjct: 61  LLTDTAKLYKAALGNCYESEDWGPVEFCIMAKHFDRQGKSPYVYHSVSFHKSRILMQYMA 120

Query: 111 QLLSHGQIDGSG 122
            LLS GQ+DGSG
Sbjct: 121 HLLSQGQLDGSG 132