Miyakogusa Predicted Gene

Lj0g3v0310799.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0310799.1 Non Chatacterized Hit- tr|I1NDZ8|I1NDZ8_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,73.68,0,seg,NULL;
coiled-coil,NULL,CUFF.20960.1
         (171 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G14470.1 | Symbols:  | NB-ARC domain-containing disease resis...    89   1e-18
AT3G14460.1 | Symbols:  | LRR and NB-ARC domains-containing dise...    67   5e-12

>AT3G14470.1 | Symbols:  | NB-ARC domain-containing disease
           resistance protein | chr3:4857940-4861104 FORWARD
           LENGTH=1054
          Length = 1054

 Score = 89.0 bits (219), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/173 (34%), Positives = 94/173 (54%), Gaps = 8/173 (4%)

Query: 6   VGQALISSCVDILLSRIASSEFRDFYANRKLNESXXXXXXXXXXXXNAVLNDAEEKQITD 65
           +G+  +++ +  L   + S  FR F+  R+LNE+             AVL DAEEKQIT+
Sbjct: 4   IGEMFLAAFLQALFQTLVSEPFRSFFKRRELNENLLERLSTALLTITAVLIDAEEKQITN 63

Query: 66  LAVKAWLDELKDAVLDAEDILDEINTDSIRRKVKGESVKCTAKVRSL-----LSPPFNKF 120
             V+ W++EL+D V  AED LD+I T+++R  +  ES   + ++R L     L    +  
Sbjct: 64  PVVEKWVNELRDVVYHAEDALDDIATEALRLNIGAES-SSSNRLRQLRGRMSLGDFLDGN 122

Query: 121 YRSMNSKLEAVSQRLEYFVQQKDILGLQNVTRRVS-FRTSSDSVV-ESFVVAR 171
              + ++LE V+ RLE    Q++ILGL+ +T  +   R  + S+V ES V  R
Sbjct: 123 SEHLETRLEKVTIRLERLASQRNILGLKELTAMIPKQRLPTTSLVDESEVFGR 175


>AT3G14460.1 | Symbols:  | LRR and NB-ARC domains-containing disease
           resistance protein | chr3:4851990-4856264 REVERSE
           LENGTH=1424
          Length = 1424

 Score = 67.0 bits (162), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 82/159 (51%), Gaps = 3/159 (1%)

Query: 6   VGQALISSCVDILLSRIASSEFRDFYANRKLNESXXXXXXXXXXXXNAVLNDAEEKQITD 65
           +  + +SSC ++++ RI +S+        K + +            N VL DA+++    
Sbjct: 1   MANSYLSSCANVMVERINTSQELVELCKGKSSSALLKRLKVALVTANPVLADADQRAEHV 60

Query: 66  LAVKAWLDELKDAVLDAEDILDEINTDSIRRKVKGESVKCTAKVRSLLSPPFNKFYRSMN 125
             VK WL  +KDA   AEDILDE+ T+++RR+V  E+       ++L++       + + 
Sbjct: 61  REVKHWLTGIKDAFFQAEDILDELQTEALRRRVVAEAGGLGGLFQNLMA-GREAIQKKIE 119

Query: 126 SKLEAVSQRLEYFVQQKDILGLQNV--TRRVSFRTSSDS 162
            K+E V + LE+ V+  +++GL+    TR   +R +S S
Sbjct: 120 PKMEKVVRLLEHHVKHIEVIGLKEYSETREPQWRQASRS 158