Miyakogusa Predicted Gene

Lj0g3v0310199.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0310199.1 Non Chatacterized Hit- tr|D7U2A5|D7U2A5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,49.46,1e-17,coiled-coil,NULL,CUFF.20938.1
         (85 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G02405.1 | Symbols:  | S-adenosyl-L-methionine-dependent meth...    65   8e-12

>AT4G02405.1 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr4:1057999-1059671 REVERSE LENGTH=333
          Length = 333

 Score = 65.5 bits (158), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 58/94 (61%), Gaps = 14/94 (14%)

Query: 1   MKGSFFVEELPAWLAESDIEIKAITQQWLDKLFM--------IKYEGVAESFGRDF-TAR 51
           M   + + ELP     ++I +++   +W++KLFM        + YE +A S G    +  
Sbjct: 238 MNECYLIGELP-----TNITLQSDLSKWMEKLFMSNGFRVKIVSYEEIAASLGVVLHSPV 292

Query: 52  NYNNILFVAEQLRHFDEQMETWRREFQMLQDEGD 85
           N++ +LF+A+QL+  D+QMETWR+EFQ ++++GD
Sbjct: 293 NHDTVLFIAQQLKFSDDQMETWRQEFQRVEEDGD 326