Miyakogusa Predicted Gene

Lj0g3v0308569.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0308569.1 tr|I1J4I8|I1J4I8_SOYBN Cytosine-specific
methyltransferase OS=Glycine max PE=3 SV=1,81.51,0,DNA_methylase,C-5
cytosine methyltransferase; DNA (CYTOSINE-5)-METHYLTRANSFERASE 1
(DNMT1),NULL; CYT,CUFF.20838.1
         (351 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G69770.1 | Symbols: CMT3 | chromomethylase 3 | chr1:26248496-...   458   e-129
AT4G19020.1 | Symbols: CMT2 | chromomethylase 2 | chr4:10414526-...   424   e-119
AT1G80740.1 | Symbols: CMT1, DMT4 | chromomethylase 1 | chr1:303...   374   e-104
AT4G14140.1 | Symbols: MET2, DMT02, DMT2, MET02 | DNA methyltran...   174   6e-44
AT4G13610.1 | Symbols: MEE57 | DNA (cytosine-5-)-methyltransfera...   174   6e-44
AT4G14140.2 | Symbols: DMT2 | DNA methyltransferase 2 | chr4:814...   174   8e-44
AT4G08990.1 | Symbols:  | DNA (cytosine-5-)-methyltransferase fa...   166   3e-41
AT5G49160.1 | Symbols: MET1, MET2, METI, DDM2, DMT01, DMT1 | met...   163   2e-40

>AT1G69770.1 | Symbols: CMT3 | chromomethylase 3 |
           chr1:26248496-26253519 REVERSE LENGTH=839
          Length = 839

 Score =  458 bits (1178), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 229/350 (65%), Positives = 271/350 (77%), Gaps = 2/350 (0%)

Query: 1   MDIVQYLKPKFALMENVVDILRFSKGFMGRYALGRLLQMNYQSRLGIMAAGAYGLPQFRL 60
           M+IV+YLKPKF LMENVVD+L+ +KG++ R+A+GRLLQMNYQ R G+MAAGAYGL QFRL
Sbjct: 488 MNIVEYLKPKFVLMENVVDMLKMAKGYLARFAVGRLLQMNYQVRNGMMAAGAYGLAQFRL 547

Query: 61  RVFIWGAAPTEKLPQFPLPTHDVILRGVIPVEFVINTVAYNEGHNEQLQRKLLLEDAISD 120
           R F+WGA P+E +PQFPLPTHD++ RG I  EF  N VAY+EGH  +L  KLLL+D ISD
Sbjct: 548 RFFLWGALPSEIIPQFPLPTHDLVHRGNIVKEFQGNIVAYDEGHTVKLADKLLLKDVISD 607

Query: 121 LPPIDNNERRDEMQYDKSPQTEFQKFIRLSKNEMLGIPTRKSSN-SMLYDHRSLKLNADD 179
           LP + N+E+RDE+ YDK P T FQKFIRL K+E  G  ++  S   +LYDH  L LN +D
Sbjct: 608 LPAVANSEKRDEITYDKDPTTPFQKFIRLRKDEASGSQSKSKSKKHVLYDHHPLNLNIND 667

Query: 180 YQRVCRIPKKKGGCFRDLPGVRVRPDNKVEWNPDVKRVYLGSGKPLVPDYAMSFVGGTSS 239
           Y+RVC++PK+KG  FRD PGV V P N V+     +RV L SGK LVPDYA+++V G S 
Sbjct: 668 YERVCQVPKRKGANFRDFPGVIVGPGNVVKLEEGKERVKLESGKTLVPDYALTYVDGKSC 727

Query: 240 KPFARLWWDETVPTVVTRAEPHNQAILHPEQDRVLSIRENARLQGFPDYYKLCGPVKQRY 299
           KPF RLWWDE VPTVVTRAEPHNQ I+HPEQ+RVLSIRENARLQGFPD YKL GP KQ+Y
Sbjct: 728 KPFGRLWWDEIVPTVVTRAEPHNQVIIHPEQNRVLSIRENARLQGFPDDYKLFGPPKQKY 787

Query: 300 IQVGNAVAVPVARALGYTLGLAFQG-AVGDGPLYKLVDGFPMNFPSSSSE 348
           IQVGNAVAVPVA+ALGY LG AFQG AVG  PL  L +GF    P+  SE
Sbjct: 788 IQVGNAVAVPVAKALGYALGTAFQGLAVGKDPLLTLPEGFAFMKPTLPSE 837


>AT4G19020.1 | Symbols: CMT2 | chromomethylase 2 |
            chr4:10414526-10420936 FORWARD LENGTH=1295
          Length = 1295

 Score =  424 bits (1090), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 204/348 (58%), Positives = 259/348 (74%), Gaps = 7/348 (2%)

Query: 1    MDIVQYLKPKFALMENVVDILRFSKGFMGRYALGRLLQMNYQSRLGIMAAGAYGLPQFRL 60
            MDIV+YLKP + LMENVVDILR  KG +GRYAL RL+ M YQ+RLGIM AG YGL QFR 
Sbjct: 943  MDIVEYLKPSYVLMENVVDILRMDKGSLGRYALSRLVNMRYQARLGIMTAGCYGLSQFRS 1002

Query: 61   RVFIWGAAPTEKLPQFPLPTHDVILRGVIPVEFVINTVAYNEGHNEQLQRKLLLEDAISD 120
            RVF+WGA P + LP FPLPTHDVI+R  +P+EF  N VAY EG   +L++ L+L+DAISD
Sbjct: 1003 RVFMWGAVPNKNLPPFPLPTHDVIVRYGLPLEFERNVVAYAEGQPRKLEKALVLKDAISD 1062

Query: 121  LPPIDNNERRDEMQYDKSPQTEFQKFIRLSKNEMLG--IPTRKSSNSMLYDHRSLKLNAD 178
            LP + N+E R+++ Y+  P+T+FQ++IR +K ++ G  I        +L+DHR   +N D
Sbjct: 1063 LPHVSNDEDREKLPYESLPKTDFQRYIRSTKRDLTGSAIDNCNKRTMLLHDHRPFHINED 1122

Query: 179  DYQRVCRIPKKKGGCFRDLPGVRVRPDNKVEWNPDVKRVYLGSGKPLVPDYAMSFVGGTS 238
            DY RVC+IPK+KG  FRDLPG+ VR +N V  +P ++ V L SGKPLVP Y  +F  G S
Sbjct: 1123 DYARVCQIPKRKGANFRDLPGLIVR-NNTVCRDPSMEPVILPSGKPLVPGYVFTFQQGKS 1181

Query: 239  SKPFARLWWDETVPTVVTRAEPHNQAILHPEQDRVLSIRENARLQGFPDYYKLCGPVKQR 298
             +PFARLWWDETVPTV+T    H+QA+LHPEQDRVL+IRE+ARLQGFPDY++ CG +K+R
Sbjct: 1182 KRPFARLWWDETVPTVLTVPTCHSQALLHPEQDRVLTIRESARLQGFPDYFQFCGTIKER 1241

Query: 299  YIQVGNAVAVPVARALGYTLGLAFQGAVGDGPLYKLVDGFPMNFPSSS 346
            Y Q+GNAVAV V+RALGY+LG+AF+G   D  L KL    P NF  S+
Sbjct: 1242 YCQIGNAVAVSVSRALGYSLGMAFRGLARDEHLIKL----PQNFSHST 1285


>AT1G80740.1 | Symbols: CMT1, DMT4 | chromomethylase 1 |
           chr1:30342394-30346831 FORWARD LENGTH=791
          Length = 791

 Score =  374 bits (960), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 194/345 (56%), Positives = 240/345 (69%), Gaps = 13/345 (3%)

Query: 1   MDIVQYLKPKFALMENVVDILRFSKGFMGRYALGRLLQMNYQSRLGIMAAGAYGLPQFRL 60
           +DI+ +LKP + LMENVVD+LRFSKGF+ R+A+   + MNYQ+RLG+MAAG+YGLPQ R 
Sbjct: 445 LDIIDFLKPNYVLMENVVDLLRFSKGFLARHAVASFVAMNYQTRLGMMAAGSYGLPQLRN 504

Query: 61  RVFIWGAAPTEKLPQFPLPTHDVILRGVIPVEFVINTVAYNEGHNEQLQRKLLLEDAISD 120
           RVF+W A P+EKLP +PLPTH+V  +   P EF    V   +    +L   L L DAISD
Sbjct: 505 RVFLWAAQPSEKLPPYPLPTHEVAKKFNTPKEFKDLQVGRIQMEFLKLDNALTLADAISD 564

Query: 121 LPPIDNNERRDEMQY-DKSPQTEFQKFIRLSKNEML-----GIPTRKSSNSMLYDHRSLK 174
           LPP+ N    D M Y D +P+TEF+ FI L ++E L     G PTR+     L+DH+ L 
Sbjct: 565 LPPVTNYVANDVMDYNDAAPKTEFENFISLKRSETLLPAFGGDPTRR-----LFDHQPLV 619

Query: 175 LNADDYQRVCRIPKKKGGCFRDLPGVRVRPDNKVEWNPDVKRVYLGSGKPLVPDYAMSFV 234
           L  DD +RV  IPK+KG  +RD+PGV V  +NK E NP   R  L SGK +VP YA+SF+
Sbjct: 620 LGDDDLERVSYIPKQKGANYRDMPGVLVH-NNKAEINPRF-RAKLKSGKNVVPAYAISFI 677

Query: 235 GGTSSKPFARLWWDETVPTVVTRAEPHNQAILHPEQDRVLSIRENARLQGFPDYYKLCGP 294
            G S KPF RLW DE V TVVTRAEPHNQ ++HP Q+RVLS+RENARLQGFPD YKLCG 
Sbjct: 678 KGKSKKPFGRLWGDEIVNTVVTRAEPHNQCVIHPMQNRVLSVRENARLQGFPDCYKLCGT 737

Query: 295 VKQRYIQVGNAVAVPVARALGYTLGLAFQGAVGDGPLYKLVDGFP 339
           +K++YIQVGNAVAVPV  ALGY  G+A QG   D P+ KL   +P
Sbjct: 738 IKEKYIQVGNAVAVPVGVALGYAFGMASQGLTDDEPVIKLPFKYP 782


>AT4G14140.1 | Symbols: MET2, DMT02, DMT2, MET02 | DNA
            methyltransferase 2 | chr4:8146345-8152131 FORWARD
            LENGTH=1519
          Length = 1519

 Score =  174 bits (442), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 112/330 (33%), Positives = 168/330 (50%), Gaps = 37/330 (11%)

Query: 1    MDIVQYLKPKFALMENVVDILRFSKGFMGRYALGRLLQMNYQSRLGIMAAGAYGLPQFRL 60
            +    Y +PK+ L+ENV   + ++KG   +  +  LL+M YQ R GI+ AG YG+ Q R 
Sbjct: 1209 LSFADYFRPKYFLLENVKKFVTYNKGRTFQLTMASLLEMGYQVRFGILEAGTYGVSQPRK 1268

Query: 61   RVFIWGAAPTEKLPQFPLPTHDVILRGVIPVEFVINTVAYNEGHNEQLQ---RKLLLEDA 117
            RV IW A+P E LP++P P H  +         +   + Y+ G N +     R + + D 
Sbjct: 1269 RVIIWAASPEEVLPEWPEPMH--VFDNPGSKISLPRGLRYDAGCNTKFGAPFRSITVRDT 1326

Query: 118  ISDLPPIDNNERRDEMQYDKSPQTEFQKFIRLSKNEMLGIPTRKSSNSMLYDHRSLKLNA 177
            I DLPP++N E +   +Y  +P + FQK IR              + S+L DH    LN 
Sbjct: 1327 IGDLPPVENGESKINKEYGTTPASWFQKKIR-------------GNMSVLTDHICKGLNE 1373

Query: 178  DDYQRVCRIPKKKGGCFRDLPGVRVRPDNKVEWNPDVKRVYLGSGKPLVPDYAMSFVGGT 237
             +  R  +IPK+ G  +RDLP   V   N +     V+++     +PL    A+S     
Sbjct: 1374 LNLIRCKKIPKRPGADWRDLPDENVTLSNGL-----VEKL-----RPL----ALSKTAKN 1419

Query: 238  SSK---PFARLWWDETVPTVVTRAEPHNQA--ILHPEQDRVLSIRENARLQGFPDYYKLC 292
             ++    + RL W   +P  +T  +P  +     HPEQDR++++RE AR QGFPD Y+  
Sbjct: 1420 HNEWKGLYGRLDWQGNLPISITDPQPMGKVGMCFHPEQDRIITVRECARSQGFPDSYEFS 1479

Query: 293  GPVKQRYIQVGNAVAVPVARALGYTLGLAF 322
            G  K ++ Q+GNAV  P+A ALG  L  A 
Sbjct: 1480 GTTKHKHRQIGNAVPPPLAFALGRKLKEAL 1509


>AT4G13610.1 | Symbols: MEE57 | DNA (cytosine-5-)-methyltransferase
            family protein | chr4:7915022-7921231 FORWARD LENGTH=1404
          Length = 1404

 Score =  174 bits (442), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 115/327 (35%), Positives = 159/327 (48%), Gaps = 41/327 (12%)

Query: 1    MDIVQYLKPKFALMENVVDILRFSKGFMGRYALGRLLQMNYQSRLGIMAAGAYGLPQFRL 60
            +    Y +PK+ L+ENV   + F++G      +  LL+M YQ R G++ AGAYG+ Q R 
Sbjct: 1111 LSFADYFRPKYFLLENVKTFVSFNEGHTFHLTVASLLEMGYQVRFGLLEAGAYGISQPRK 1170

Query: 61   RVFIWGAAPTEKLPQFPLPTHDVILRGV-IPVEFVINTVAYNEGHNEQLQRKLLLEDAIS 119
            R FIW AAP E LP++P P H     G  IP+   ++  A          R + + DAI 
Sbjct: 1171 RAFIWAAAPNEVLPEWPEPMHVFNNPGFKIPLSQGLHYAAVQSTKFGAPFRSITVRDAIG 1230

Query: 120  DLPPIDNNERRDEMQYDKSPQTEFQKFIRLSKNEMLGIPTRKSSNSMLYDHRSLKLNADD 179
            DLPPI++ E                   +++K EM G      S ++L DH   K+N  +
Sbjct: 1231 DLPPIESGES------------------KINKEEMRG------SMTVLTDHICKKMNELN 1266

Query: 180  YQRVCRIPKKKGGCFRDLPGVRVRPDNKVEWNPDVKRVYLGSGKPLVPDYAMSFVGGTSS 239
              R  +IPK  G  +RDLP   V   N             G  K +VP+           
Sbjct: 1267 LIRCKKIPKTPGADWRDLPDEHVNLSN-------------GIVKNIVPNLLNKAKDHNGY 1313

Query: 240  KP-FARLWWDETVPTVVTRAEPHNQA--ILHPEQDRVLSIRENARLQGFPDYYKLCGPVK 296
            K  + RL W   +PT +T  +P        HP+QDR++S+RE AR QGFPD YK  G +K
Sbjct: 1314 KGLYGRLDWHGNLPTCITNLQPMGLVGMCFHPDQDRIISVRECARSQGFPDSYKFSGNIK 1373

Query: 297  QRYIQVGNAVAVPVARALGYTLGLAFQ 323
             ++ QVGNAV  P+A ALG  L  A  
Sbjct: 1374 DKHRQVGNAVPPPLAFALGRKLKEALH 1400


>AT4G14140.2 | Symbols: DMT2 | DNA methyltransferase 2 |
            chr4:8146345-8152131 FORWARD LENGTH=1545
          Length = 1545

 Score =  174 bits (441), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 112/330 (33%), Positives = 168/330 (50%), Gaps = 37/330 (11%)

Query: 1    MDIVQYLKPKFALMENVVDILRFSKGFMGRYALGRLLQMNYQSRLGIMAAGAYGLPQFRL 60
            +    Y +PK+ L+ENV   + ++KG   +  +  LL+M YQ R GI+ AG YG+ Q R 
Sbjct: 1235 LSFADYFRPKYFLLENVKKFVTYNKGRTFQLTMASLLEMGYQVRFGILEAGTYGVSQPRK 1294

Query: 61   RVFIWGAAPTEKLPQFPLPTHDVILRGVIPVEFVINTVAYNEGHNEQLQ---RKLLLEDA 117
            RV IW A+P E LP++P P H  +         +   + Y+ G N +     R + + D 
Sbjct: 1295 RVIIWAASPEEVLPEWPEPMH--VFDNPGSKISLPRGLRYDAGCNTKFGAPFRSITVRDT 1352

Query: 118  ISDLPPIDNNERRDEMQYDKSPQTEFQKFIRLSKNEMLGIPTRKSSNSMLYDHRSLKLNA 177
            I DLPP++N E +   +Y  +P + FQK IR              + S+L DH    LN 
Sbjct: 1353 IGDLPPVENGESKINKEYGTTPASWFQKKIR-------------GNMSVLTDHICKGLNE 1399

Query: 178  DDYQRVCRIPKKKGGCFRDLPGVRVRPDNKVEWNPDVKRVYLGSGKPLVPDYAMSFVGGT 237
             +  R  +IPK+ G  +RDLP   V   N +     V+++     +PL    A+S     
Sbjct: 1400 LNLIRCKKIPKRPGADWRDLPDENVTLSNGL-----VEKL-----RPL----ALSKTAKN 1445

Query: 238  SSK---PFARLWWDETVPTVVTRAEPHNQA--ILHPEQDRVLSIRENARLQGFPDYYKLC 292
             ++    + RL W   +P  +T  +P  +     HPEQDR++++RE AR QGFPD Y+  
Sbjct: 1446 HNEWKGLYGRLDWQGNLPISITDPQPMGKVGMCFHPEQDRIITVRECARSQGFPDSYEFS 1505

Query: 293  GPVKQRYIQVGNAVAVPVARALGYTLGLAF 322
            G  K ++ Q+GNAV  P+A ALG  L  A 
Sbjct: 1506 GTTKHKHRQIGNAVPPPLAFALGRKLKEAL 1535


>AT4G08990.1 | Symbols:  | DNA (cytosine-5-)-methyltransferase family
            protein | chr4:5764781-5770496 FORWARD LENGTH=1512
          Length = 1512

 Score =  166 bits (419), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 109/330 (33%), Positives = 166/330 (50%), Gaps = 37/330 (11%)

Query: 1    MDIVQYLKPKFALMENVVDILRFSKGFMGRYALGRLLQMNYQSRLGIMAAGAYGLPQFRL 60
            +    Y +PK+ L+ENV   + ++KG   +  +  LL++ YQ R GI+ AG YG+ Q R 
Sbjct: 1202 LSFADYFRPKYFLLENVKKFVTYNKGRTFQLTMASLLEIGYQVRFGILEAGTYGVSQPRK 1261

Query: 61   RVFIWGAAPTEKLPQFPLPTHDVILRGVIPVEFVINTVAYNEGHNEQLQ---RKLLLEDA 117
            RV IW A+P E LP++P P H  +         +   + Y+   N +     R + + D 
Sbjct: 1262 RVIIWAASPEEVLPEWPEPMH--VFDNPGSKISLPRGLHYDTVRNTKFGAPFRSITVRDT 1319

Query: 118  ISDLPPIDNNERRDEMQYDKSPQTEFQKFIRLSKNEMLGIPTRKSSNSMLYDHRSLKLNA 177
            I DLP ++N E +   +Y  +P + FQK IR              + S+L DH    LN 
Sbjct: 1320 IGDLPLVENGESKINKEYRTTPVSWFQKKIR-------------GNMSVLTDHICKGLNE 1366

Query: 178  DDYQRVCRIPKKKGGCFRDLPGVRVRPDNKVEWNPDVKRVYLGSGKPLVPDYAMSFVGGT 237
             +  R  +IPK+ G  +RDLP   V   N +     V+++     +PL    A+S     
Sbjct: 1367 LNLIRCKKIPKRPGADWRDLPDENVTLSNGL-----VEKL-----RPL----ALSKTAKN 1412

Query: 238  SSK---PFARLWWDETVPTVVTRAEPHNQA--ILHPEQDRVLSIRENARLQGFPDYYKLC 292
             ++    + RL W   +P  +T  +P  +     HPEQDR++++RE AR QGFPD Y+  
Sbjct: 1413 HNEWKGLYGRLDWQGNLPISITDPQPMGKVGMCFHPEQDRIITVRECARSQGFPDSYEFS 1472

Query: 293  GPVKQRYIQVGNAVAVPVARALGYTLGLAF 322
            G  K ++ Q+GNAV  P+A ALG  L  A 
Sbjct: 1473 GTTKHKHRQIGNAVPPPLAFALGRKLKEAL 1502


>AT5G49160.1 | Symbols: MET1, MET2, METI, DDM2, DMT01, DMT1 |
            methyltransferase 1 | chr5:19932501-19938186 FORWARD
            LENGTH=1534
          Length = 1534

 Score =  163 bits (413), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/330 (33%), Positives = 160/330 (48%), Gaps = 35/330 (10%)

Query: 1    MDIVQYLKPKFALMENVVDILRFSKGFMGRYALGRLLQMNYQSRLGIMAAGAYGLPQFRL 60
            +    Y +P++ L+ENV   + F+KG   +  L  LL+M YQ R GI+ AGAYG+ Q R 
Sbjct: 1224 LSFADYFRPRYFLLENVRTFVSFNKGQTFQLTLASLLEMGYQVRFGILEAGAYGVSQSRK 1283

Query: 61   RVFIWGAAPTEKLPQFPLPTHDVILRGVIPVEFVINT-VAYNEGHNEQLQ---RKLLLED 116
            R FIW AAP E LP++P P H   + GV  ++  ++  + Y    +  L    R + + D
Sbjct: 1284 RAFIWAAAPEEVLPEWPEPMH---VFGVPKLKISLSQGLHYAAVRSTALGAPFRPITVRD 1340

Query: 117  AISDLPPIDNNERRDEMQYDKSPQTEFQKFIRLSKNEMLGIPTRKSSNSMLYDHRSLKLN 176
             I DLP ++N + R   +Y +   + FQK IR              +   L DH    +N
Sbjct: 1341 TIGDLPSVENGDSRTNKEYKEVAVSWFQKEIR-------------GNTIALTDHICKAMN 1387

Query: 177  ADDYQRVCRIPKKKGGCFRDLPGVRVR-PDNKVEWNPDVKRVYLGSGKPLVPDYAMSFVG 235
              +  R   IP + G  + DLP  +V   D +VE                +P+ A    G
Sbjct: 1388 ELNLIRCKLIPTRPGADWHDLPKRKVTLSDGRVEEMIPF----------CLPNTAERHNG 1437

Query: 236  GTSSKPFARLWWDETVPTVVTRAEPHNQA--ILHPEQDRVLSIRENARLQGFPDYYKLCG 293
                  + RL W    PT VT  +P  +     HPEQ R+L++RE AR QGFPD Y+  G
Sbjct: 1438 WKGL--YGRLDWQGNFPTSVTDPQPMGKVGMCFHPEQHRILTVRECARSQGFPDSYEFAG 1495

Query: 294  PVKQRYIQVGNAVAVPVARALGYTLGLAFQ 323
             +  ++ Q+GNAV  P+A ALG  L  A  
Sbjct: 1496 NINHKHRQIGNAVPPPLAFALGRKLKEALH 1525