Miyakogusa Predicted Gene
- Lj0g3v0308479.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0308479.1 Non Chatacterized Hit- tr|I1LNY1|I1LNY1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.18675 PE,84.91,0,
,CUFF.20847.1
(472 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G30700.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 584 e-167
AT1G61900.1 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 275 3e-74
AT1G61900.3 | Symbols: | unknown protein; BEST Arabidopsis thal... 273 2e-73
AT1G61900.2 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 270 1e-72
>AT2G30700.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G61900.1); Has 68 Blast hits to 67 proteins in
13 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi
- 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink). | chr2:13082033-13084384 REVERSE
LENGTH=480
Length = 480
Score = 584 bits (1506), Expect = e-167, Method: Compositional matrix adjust.
Identities = 307/463 (66%), Positives = 360/463 (77%), Gaps = 11/463 (2%)
Query: 1 MGCFQDVNCHRGSLCCQLILFFTWLPTFLDVTAQA---EPRRISSLVELAKEPTSGESGL 57
MG + V +G L + +LF WL +F DV A E S+ ELA P G SG
Sbjct: 8 MGSLETVCWLKGCLVYRFLLFIIWLSSFQDVAAHDKLNEHSSRSTTSELANPPGIGVSG- 66
Query: 58 FDPIEISPAVIPKFPHPSESF-PPMYPIFPSKYEPVLTGKCPVNFSESEISNMLDKTASD 116
PI++SP+VIPK+ P+ + PPMYP FP YEP LTGKCP +F IS+++D ASD
Sbjct: 67 --PIQVSPSVIPKYASPALPWTPPMYPTFPDTYEPKLTGKCPTDFQA--ISSVIDTAASD 122
Query: 117 CSAPLASLVGNVICCPQFSSLIHIFQGFISMKSNNLVLPNEAADPCFSDIISILASRGAN 176
CS P A+LVGNVICCPQF SL+HIFQG ++KSN LVLP+ A CFSDI+SIL SR AN
Sbjct: 123 CSQPFAALVGNVICCPQFVSLLHIFQGQHNVKSNKLVLPDAVATDCFSDIVSILVSRRAN 182
Query: 177 SSIPTLCSVKSSNLTGGSCPVKDDSTFEKIVNTSKLLEACSTVDQLKECCRPICQHAITD 236
+IP LCSV SSNLTGGSCPV D +TFEK+VN+SKLL+AC TVD LKECCRPICQ AI +
Sbjct: 183 MTIPALCSVTSSNLTGGSCPVTDVTTFEKVVNSSKLLDACRTVDPLKECCRPICQPAIME 242
Query: 237 AALQISGRQMMINNNENVAQEVNYTDYLNDCKGVVYSYLSKKLSFEAANTAFRILSSCKV 296
AAL ISG QM + + +A N + +NDCK VV+SYLS+KL + AN AFRILSSCKV
Sbjct: 243 AALIISGHQMTVGDKIPLAGS-NNVNAINDCKNVVFSYLSRKLPADKANAAFRILSSCKV 301
Query: 297 NKVCPLTFKEPSEVIAACRNVAAPSPSCCSSLNTYIAGIQKQMLITNKQAIICASLFGSM 356
NK CPL FKEP+EVI ACRNVAAPSPSCCSSLN YI+GIQ QMLITNKQAI+CA++ GSM
Sbjct: 302 NKACPLEFKEPTEVIKACRNVAAPSPSCCSSLNAYISGIQNQMLITNKQAIVCATVIGSM 361
Query: 357 LRVGGVMTNIYELCDVDLKDFSIQAYG-QQGCLLRSLPADVVFDNSSGFSFTCDLSDNIA 415
LR GGVMTNIYELCDVDLKDFS+QAYG QQGCLLRS PAD++FDN+SG+SFTCDL+DNIA
Sbjct: 362 LRKGGVMTNIYELCDVDLKDFSVQAYGMQQGCLLRSYPADLIFDNTSGYSFTCDLTDNIA 421
Query: 416 APWPSSTSITSMSLCAPEMSLPALPTSQTLKNIGCNSAGVGFL 458
APWPSS+S++S+SLCAPEMSLPALPTSQT+KN G + GVG L
Sbjct: 422 APWPSSSSMSSLSLCAPEMSLPALPTSQTIKNHGFCNGGVGAL 464
>AT1G61900.1 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: anchored to
plasma membrane, plasma membrane, anchored to membrane;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G30700.1); Has 65 Blast
hits to 65 proteins in 12 species: Archae - 0; Bacteria
- 0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0;
Other Eukaryotes - 0 (source: NCBI BLink). |
chr1:22882508-22884722 REVERSE LENGTH=433
Length = 433
Score = 275 bits (704), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 160/400 (40%), Positives = 231/400 (57%), Gaps = 14/400 (3%)
Query: 62 EISPAVIPKFPHPSESFPPMYPIFPSKYEPVLTGKCPVNFSESEISNMLDKTASDCSAPL 121
EISP P+ P + PM P S P L+G C +NFS SE +++ T+ +C
Sbjct: 35 EISPDTSPQPFLPFIAPSPMVPYINSTM-PKLSGLCSLNFSASE--SLIQTTSHNCWTVF 91
Query: 122 ASLVGNVICCPQFSSLIHIFQGFISMKSNNLVLPNEAADPCFSDIISILASRGANSSIPT 181
A L+ NV+CCPQ + + I G S ++ L L + C SD+ IL +GA+ +
Sbjct: 92 APLLANVMCCPQLDATLTIILGKASKETGLLALNRTQSKHCLSDLEQILVGKGASGQLNK 151
Query: 182 LCSVKSSNLTGGSCPVKDDSTFEKIVNTSKLLEACSTVDQLKECCRPICQHAITDAALQI 241
+CS+ SSNLT SCPV + FE V+T+KLL AC +D +KECC CQ+AI DAA I
Sbjct: 152 ICSIHSSNLTSSSCPVINVDEFESTVDTAKLLLACEKIDPVKECCEEACQNAILDAATNI 211
Query: 242 SGRQMMINNNENVAQEVNYTDYLNDCKGVVYSYLSKKLSFEAANTAFRILSSCKVNKVCP 301
S + +E + + +D +NDCK VV +L+ KL R L++CK+N+VCP
Sbjct: 212 S-----LKASETL---TDNSDRINDCKNVVNRWLATKLDPSRVKETLRGLANCKINRVCP 263
Query: 302 LTFKEPSEVIAACRNVAAPSPSCCSSLNTYIAGIQKQMLITNKQAIICASLFGSMLRVGG 361
L F + C N + CC ++ +Y++ +QKQ LITN QA+ CA+ G+ L+
Sbjct: 264 LVFPHMKHIGGNCSNELSNQTGCCRAMESYVSHLQKQTLITNLQALDCATSLGTKLQKLN 323
Query: 362 VMTNIYELCDVDLKDFSIQAYGQQ-GCLLRSLPADVVFDNSSGFSFTCDLSDNIAAPWPS 420
+ NI+ +C + LKDFS+Q Q+ GCLL SLP+D +FD +G SFTCDL+DNI APWPS
Sbjct: 324 ITKNIFSVCHISLKDFSLQVGNQESGCLLPSLPSDAIFDKDTGISFTCDLNDNIPAPWPS 383
Query: 421 STSITSMSLCAPEMSLPALPTSQTLKNIGCNSAGVGFLVI 460
S+ ++ + C + +PALP + + + GV LVI
Sbjct: 384 SSLSSAST-CKKPVRIPALPAAAS-SQPRLHDEGVTRLVI 421
>AT1G61900.3 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G30700.1). | chr1:22882508-22884722 REVERSE
LENGTH=429
Length = 429
Score = 273 bits (698), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 159/399 (39%), Positives = 230/399 (57%), Gaps = 16/399 (4%)
Query: 62 EISPAVIPKFPHPSESFPPMYPIFPSKYEPVLTGKCPVNFSESEISNMLDKTASDCSAPL 121
EISP P+ P + PM P S P L+G C +NFS SE +++ T+ +C
Sbjct: 35 EISPDTSPQPFLPFIAPSPMVPYINSTM-PKLSGLCSLNFSASE--SLIQTTSHNCWTVF 91
Query: 122 ASLVGNVICCPQFSSLIHIFQGFISMKSNNLVLPNEAADPCFSDIISILASRGANSSIPT 181
A L+ NV+CCPQ + + I G S ++ L L + C SD+ IL +GA+ +
Sbjct: 92 APLLANVMCCPQLDATLTIILGKASKETGLLALNRTQSKHCLSDLEQILVGKGASGQLNK 151
Query: 182 LCSVKSSNLTGGSCPVKDDSTFEKIVNTSKLLEACSTVDQLKECCRPICQHAITDAALQI 241
+CS+ SSNLT SCPV + FE V+T+KLL AC +D +KECC CQ+AI DAA I
Sbjct: 152 ICSIHSSNLTSSSCPVINVDEFESTVDTAKLLLACEKIDPVKECCEEACQNAILDAATNI 211
Query: 242 SGRQMMINNNENVAQEVNYTDYLNDCKGVVYSYLSKKLSFEAANTAFRILSSCKVNKVCP 301
S + +E + + +D +NDCK VV +L+ KL R L++CK+N+VCP
Sbjct: 212 S-----LKASETL---TDNSDRINDCKNVVNRWLATKLDPSRVKETLRGLANCKINRVCP 263
Query: 302 LTFKEPSEVIAACRNVAAPSPSCCSSLNTYIAGIQKQMLITNKQAIICASLFGSMLRVGG 361
L F + C N + CC ++ +Y++ +QKQ LITN QA+ CA+ G+ L+
Sbjct: 264 LVFPHMKHIGGNCSNELSNQTGCCRAMESYVSHLQKQTLITNLQALDCATSLGTKLQKLN 323
Query: 362 VMTNIYELCDVDLKDFSIQAYGQQGCLLRSLPADVVFDNSSGFSFTCDLSDNIAAPWPSS 421
+ NI+ +C + LKDFS+Q + GCLL SLP+D +FD +G SFTCDL+DNI APWPSS
Sbjct: 324 ITKNIFSVCHISLKDFSLQ---ESGCLLPSLPSDAIFDKDTGISFTCDLNDNIPAPWPSS 380
Query: 422 TSITSMSLCAPEMSLPALPTSQTLKNIGCNSAGVGFLVI 460
+ ++ + C + +PALP + + + GV LVI
Sbjct: 381 SLSSAST-CKKPVRIPALPAAAS-SQPRLHDEGVTRLVI 417
>AT1G61900.2 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: anchored to
plasma membrane, plasma membrane, anchored to membrane;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G30700.1); Has 35333 Blast
hits to 34131 proteins in 2444 species: Archae - 798;
Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants -
531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI
BLink). | chr1:22882561-22884722 REVERSE LENGTH=413
Length = 413
Score = 270 bits (691), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 148/359 (41%), Positives = 210/359 (58%), Gaps = 12/359 (3%)
Query: 62 EISPAVIPKFPHPSESFPPMYPIFPSKYEPVLTGKCPVNFSESEISNMLDKTASDCSAPL 121
EISP P+ P + PM P S P L+G C +NFS SE +++ T+ +C
Sbjct: 35 EISPDTSPQPFLPFIAPSPMVPYINSTM-PKLSGLCSLNFSASE--SLIQTTSHNCWTVF 91
Query: 122 ASLVGNVICCPQFSSLIHIFQGFISMKSNNLVLPNEAADPCFSDIISILASRGANSSIPT 181
A L+ NV+CCPQ + + I G S ++ L L + C SD+ IL +GA+ +
Sbjct: 92 APLLANVMCCPQLDATLTIILGKASKETGLLALNRTQSKHCLSDLEQILVGKGASGQLNK 151
Query: 182 LCSVKSSNLTGGSCPVKDDSTFEKIVNTSKLLEACSTVDQLKECCRPICQHAITDAALQI 241
+CS+ SSNLT SCPV + FE V+T+KLL AC +D +KECC CQ+AI DAA I
Sbjct: 152 ICSIHSSNLTSSSCPVINVDEFESTVDTAKLLLACEKIDPVKECCEEACQNAILDAATNI 211
Query: 242 SGRQMMINNNENVAQEVNYTDYLNDCKGVVYSYLSKKLSFEAANTAFRILSSCKVNKVCP 301
S + +E + + +D +NDCK VV +L+ KL R L++CK+N+VCP
Sbjct: 212 S-----LKASETL---TDNSDRINDCKNVVNRWLATKLDPSRVKETLRGLANCKINRVCP 263
Query: 302 LTFKEPSEVIAACRNVAAPSPSCCSSLNTYIAGIQKQMLITNKQAIICASLFGSMLRVGG 361
L F + C N + CC ++ +Y++ +QKQ LITN QA+ CA+ G+ L+
Sbjct: 264 LVFPHMKHIGGNCSNELSNQTGCCRAMESYVSHLQKQTLITNLQALDCATSLGTKLQKLN 323
Query: 362 VMTNIYELCDVDLKDFSIQAYGQQ-GCLLRSLPADVVFDNSSGFSFTCDLSDNIAAPWP 419
+ NI+ +C + LKDFS+Q Q+ GCLL SLP+D +FD +G SFTCDL+DNI APWP
Sbjct: 324 ITKNIFSVCHISLKDFSLQVGNQESGCLLPSLPSDAIFDKDTGISFTCDLNDNIPAPWP 382