Miyakogusa Predicted Gene

Lj0g3v0307959.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0307959.2 tr|G7LB13|G7LB13_MEDTR Dedicator of cytokinesis
OS=Medicago truncatula GN=MTR_8g056900 PE=4 SV=1,84.44,0,SPIKE-1,NULL;
DEDICATOR OF CYTOKINESIS (DOCK),Dedicator of cytokinesis; seg,NULL;
DOCK_C2,NULL,CUFF.20787.2
         (853 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G16340.1 | Symbols: SPK1 | guanyl-nucleotide exchange factors...  1209   0.0  

>AT4G16340.1 | Symbols: SPK1 | guanyl-nucleotide exchange
           factors;GTPase binding;GTP binding |
           chr4:9228773-9241060 REVERSE LENGTH=1830
          Length = 1830

 Score = 1209 bits (3129), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 585/842 (69%), Positives = 675/842 (80%), Gaps = 24/842 (2%)

Query: 21  FDENLEQWPHLNELVHCYTTDWVKDENKYGHYDSIGAPSFQNQIYEGPDTDIETEMRLAS 80
            DENLEQWPHLN+LV CY T+WVKD NKYGHY++I   SFQ QI+EGPDTD ETE+RLAS
Sbjct: 27  LDENLEQWPHLNQLVQCYGTEWVKDVNKYGHYENIRPDSFQTQIFEGPDTDTETEIRLAS 86

Query: 81  ARRTKGEDISEDDVPSTSGRQFMEAADGEHSDIPKHFSQSPLPAYEPAFDWENERSLIFG 140
           AR        E+DV S SGR F +          KHF Q PLPAYEPAFDWENER++IFG
Sbjct: 87  ARSAT----IEEDVASISGRPFSDPGSS------KHFGQPPLPAYEPAFDWENERAMIFG 136

Query: 141 QRIPETPI---SHGMKISVKIQSLQFQAGLAEPFYGTICLYNRERREKLSEDFYFHVLLT 197
           QR PE+P    S G+KISV++ SL FQ+GL EPF+G+I LYN+ER+EKLSEDFYF +  T
Sbjct: 137 QRTPESPAASYSSGLKISVRVLSLAFQSGLVEPFFGSIALYNQERKEKLSEDFYFQIQPT 196

Query: 198 EMRDAKVTYEPRAVFYLDAPSASVCLLIQLEKHTTEEGGVTPSVYSRKDPVHLTEREKQK 257
           EM+DAK++ E R VFYLDAPSASVCLLIQLEK  TEEGGVT SVYSRK+PVHLTEREKQK
Sbjct: 197 EMQDAKLSSENRGVFYLDAPSASVCLLIQLEKTATEEGGVTSSVYSRKEPVHLTEREKQK 256

Query: 258 LQVWSQIMPYKESFAWTIVSLFDSSVGTAXXXXXXXXXXXXXXXXXXXXHEGVFETTSKI 317
           LQVWS+IMPY+ESFAW +V LFD+++ T                     H+GV+E  +KI
Sbjct: 257 LQVWSRIMPYRESFAWAVVPLFDNNLTTNTGESASPSSPLAPSMTASSSHDGVYEPIAKI 316

Query: 318 SLDGKLXXXXXXXXXXXXXXXXKVKESYTEESLQDPKRKLHKPVKGVLKLEIEKHKISPA 377
           + DGK                 KVKESY+EES+QDPKRK+HKPVKGVL+LEIEKH+    
Sbjct: 317 TSDGKQGYSGGSSVVVEISNLNKVKESYSEESIQDPKRKVHKPVKGVLRLEIEKHRNGHG 376

Query: 378 DLENVSENGSTTNDSVDPGDRIADSLAGKYPS-------NGCDDPQGSNGKEVSGNGSNQ 430
           D E++SENGS  NDS+DP DR++D    K PS       NGC      + K+VS N ++ 
Sbjct: 377 DFEDLSENGSIINDSLDPTDRLSDLTLMKCPSSSSGGPRNGCSKWNSEDAKDVSRNLTSS 436

Query: 431 HGNSDSYADDFHAFDFRTTTRNEPFLQLFHCLYVYPLTVSLGRKRNLFIRVELREDDADI 490
            G  D   + +HAFDF +TTRNEPFL LFHCLYVYP+ V+L RKRN FIRVELR+DD DI
Sbjct: 437 CGTPD--LNCYHAFDFCSTTRNEPFLHLFHCLYVYPVAVTLSRKRNPFIRVELRKDDTDI 494

Query: 491 RRQPLEAVYPRDPSLDASFQKWGHTQVAAGARVACYHDEIKLSLPAMWTPTHHLLFTLFH 550
           R+QPLEA+YPR+P +  S QKW HTQVA GAR A YHDEIK+SLPA WTP+HHLLFT FH
Sbjct: 495 RKQPLEAIYPREPGV--SLQKWVHTQVAVGARAASYHDEIKVSLPATWTPSHHLLFTFFH 552

Query: 551 VDLQTKLEAPKPVVIGYAALPLSSHAQLRSEINLPIMRELVPHYLQDAGRERLDYLEDGK 610
           VDLQTKLEAP+PVV+GYA+LPLS++   RS+I+LP+MRELVPHYLQ++ +ERLDYLEDGK
Sbjct: 553 VDLQTKLEAPRPVVVGYASLPLSTYIHSRSDISLPVMRELVPHYLQESTKERLDYLEDGK 612

Query: 611 NVFRLRLRLCSSLYPINERIRDFFLEYDRHTLRTSPPWGSELLEAINSLKNVDSTALLQF 670
           N+F+LRLRLCSSLYP NER+RDF LEYDRHTL+T PPWGSELL+AINSLK+VDSTALLQF
Sbjct: 613 NIFKLRLRLCSSLYPTNERVRDFCLEYDRHTLQTRPPWGSELLQAINSLKHVDSTALLQF 672

Query: 671 LHPILNMLLHLIGNGGETLQVAAFRAMVNIVTRVQQESVDDAERNHFLVNYVDCAFDDFG 730
           L+PILNMLLHLIGNGGETLQVAAFRAMV+I+TRVQQ S DDA+RN FLV YVD +FDDFG
Sbjct: 673 LYPILNMLLHLIGNGGETLQVAAFRAMVDILTRVQQVSFDDADRNRFLVTYVDYSFDDFG 732

Query: 731 GRQPPVYPGLSTVWGSLARSKAKGYRVGPVYDDVLAMAWFFLELIVKSMALEKTRLFYHS 790
           G QPPVYPGL+TVWGSLARSKAKGYRVGPVYDDVL+MAWFFLELIVKSMALE+ RL+ H+
Sbjct: 733 GNQPPVYPGLATVWGSLARSKAKGYRVGPVYDDVLSMAWFFLELIVKSMALEQARLYDHN 792

Query: 791 LPIGEDIPPMQLKDGVFRCIMQLYDCLLTEVHERCKKGLSLAKRLNSSLAFFCYDLLSII 850
           LP GED+PPMQLK+ VFRCIMQL+DCLLTEVHERCKKGLSLAKRLNSSLAFFCYDLL II
Sbjct: 793 LPTGEDVPPMQLKESVFRCIMQLFDCLLTEVHERCKKGLSLAKRLNSSLAFFCYDLLYII 852

Query: 851 EP 852
           EP
Sbjct: 853 EP 854