Miyakogusa Predicted Gene

Lj0g3v0306789.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0306789.1 Non Chatacterized Hit- tr|G8A340|G8A340_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,76.83,0,coiled-coil,NULL; seg,NULL,CUFF.20804.1
         (1994 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G50370.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   838   0.0  

>AT3G50370.1 | Symbols:  | unknown protein; FUNCTIONS IN:
            molecular_function unknown; INVOLVED IN:
            biological_process unknown; LOCATED IN:
            cellular_component unknown; EXPRESSED IN: 26 plant
            structures; EXPRESSED DURING: 15 growth stages; Has 27734
            Blast hits to 16708 proteins in 1259 species: Archae -
            81; Bacteria - 3434; Metazoa - 10876; Fungi - 2514;
            Plants - 987; Viruses - 212; Other Eukaryotes - 9630
            (source: NCBI BLink). | chr3:18676436-18683863 REVERSE
            LENGTH=2156
          Length = 2156

 Score =  838 bits (2166), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 698/1964 (35%), Positives = 953/1964 (48%), Gaps = 239/1964 (12%)

Query: 52   REKRTLPKNEKAFLEDPFMKDFG--GFDGRDPFSSXXXXXXXXXXXXXXQTDFHDPVRES 109
            R+KR+  K++K  +EDPFMKDFG  GFD  DPF                QT+FHDPVRES
Sbjct: 384  RDKRSFFKSDKPHVEDPFMKDFGDSGFDVHDPF--PVLGVTKKKKEALKQTEFHDPVRES 441

Query: 110  FEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 169
            FEA                                                         
Sbjct: 442  FEAELERVQKMQEEERRRIIEEQERVIELARTEEEERLRLAREQDERQRRLEEEAREAAF 501

Query: 170  XXXXXXIETFQRAEEQRLAREVEKQRIFLEEERRKQAAKQKLIELEQKIARRQAEVTKGS 229
                  +E  +RAEE R ++E EK R+F+EEERRKQAAKQKL+ELE+KI+RRQAE  KG 
Sbjct: 502  RNEQERLEATRRAEELRKSKEEEKHRLFMEEERRKQAAKQKLLELEEKISRRQAEAAKGC 561

Query: 230  SSAPAVVDEKMPGTMNEKDASRAIDVGDWEDSERMVDRILTSASSDSSSVNRPLEMGXXX 289
            SS+  + ++K    + EKD++   DV DWEDSERMVDRI TS++ D S   R  E     
Sbjct: 562  SSSSTISEDKFLDIVKEKDSA---DVVDWEDSERMVDRITTSSTLDLSVPMRSFESNATS 618

Query: 290  XXXXXXXXXXVDRGKPINSWRRDAYENWTSSAFYTQDQDNDHNSPRRDSSIGGKPFMRKE 349
                       DR KP  +WR++  E+ ++S F  Q+ +N  +SP+            +E
Sbjct: 619  QFSRDGSFGFPDRQKP--TWRKEDIESGSNSRFIPQNLENVPHSPQ------------EE 664

Query: 350  YNGGAGFVSSRTHYKGGASDGRLDEYAHVKPQRWNQPADGDHLSRNPEIDSDFHENFAER 409
            + G AG++S+ +++K G  +  +D       Q W  P DG    RN  ++S+  ENF E+
Sbjct: 665  FFGTAGYLSAPSYFKPGFPEHSID-------QSWRIPGDGRTHGRNYGMESESRENFGEQ 717

Query: 410  FSD-GWTLS--RPRGNPFPPFPERSYQNSESDGPYAMGRSRYSVRQPRVLPPPSLASIHR 466
            + D GW  S  RPR  P+ P+PE+ YQN E D  Y  GR RYSVRQPRVLPPP  +    
Sbjct: 718  YGDPGWGQSQGRPRHGPYSPYPEKLYQNPEGDDYYPFGRPRYSVRQPRVLPPPQESRQKT 777

Query: 467  SYRNGNEHPGPSAFLENEIPYNQATMSDSALPTGYDNGNHGQPEIVDALQESAENEGNIV 526
            S+R+  EHPGPS  +   I Y+    ++S +   Y   +H        L  S  +E    
Sbjct: 778  SFRSEVEHPGPSTSIGG-INYSHKGRTNSTVLANYIEDHH-------VLPGSGIDEHRRF 829

Query: 527  ET--TKRCXXXXXXXXXX---XXXXXXXXXXXXXRDSPVILTSEESKNAPLSAPENESIP 581
            +T  T RC                           DS V+ TS   ++A L       I 
Sbjct: 830  DTKLTGRCDSQSSLSVTSPPDSPVHLSHDDLDESADSTVLPTSRMGEDAGLLEKGGAPII 889

Query: 582  TPALAGNENVVTSSAVSSGDDDEWTTENNKQFXXXXXXXXXXX-XXXXXXVHEGDDNADL 640
            +  +  +  ++ + +VS  D++EWT ++N++                   +H  D+N DL
Sbjct: 890  SSDIGKDSLMMATGSVSCWDNEEWTLDSNERLQEQEEYDEDEDGYQEEDKIHGVDENIDL 949

Query: 641  NRDFEDMHLQEKGLPHLMDNLVLGFNEGVQVGMPNEEFERTPKHEETKFLAQQASDLTLE 700
             ++ E+MHL +K       NLVLGFNEGV+V +P+++FE+  ++ E+ F   Q +  +L+
Sbjct: 950  AQELEEMHLDDKD-----SNLVLGFNEGVEVEIPSDDFEKCQRNSESTFPLHQHTVDSLD 1004

Query: 701  EHVPFDNGCNDSKSIQPVDDASQVHLNSSSGVFHDSEKPTPELVIQPSNSHSSVASESLG 760
            +  P        ++ QP   +  + ++++S  F  +E     L + P+    S    S  
Sbjct: 1005 DERPSIETSRGEQAAQPAVVSDPLGMHNASRTFQGAETTMQNLTVHPNIGRQSFEVASKV 1064

Query: 761  NVEASNGPSTHHNTPTSVTIAPHYTSVGQSVSSNVAAAPSQAELPIKLQFGLFSGPSLIP 820
            +  +++  STH   P   + A H +S+ Q+    V+   +Q E P+K QFGLFSGPSLIP
Sbjct: 1065 DSTSNSTVSTHPVIPLH-SAALHPSSL-QTAIPPVSTTSAQMEEPVKFQFGLFSGPSLIP 1122

Query: 821  SPVPAIQIGSIQMPLHLHPQVGAPLSHMHPSQPPLFQFGQLRYTSPASQGMMPLGPQSIS 880
            SP PAIQIGSIQMPL L           HP      QFG                  S++
Sbjct: 1123 SPFPAIQIGSIQMPLPL-----------HP------QFGS-----------------SLT 1148

Query: 881  YVQPNIPSGFSFNHNPGGRIPVQTG--PATSDSFIRKE-IRHHSVDSQPGS--SRNLSQG 935
            ++Q   P    F   P    P+  G  P    S ++   +  ++++  PGS  +  L QG
Sbjct: 1149 HMQQPQPPLIQFGQLPYTS-PISQGVLPPPHHSVVQANGLSTYALNQNPGSLVTVQLGQG 1207

Query: 936  SFPVEDAENMAKIKHGHTEGSHSVNNITRTSFQLDKQG--RQNVVGKXXXXXXXAKEPEF 993
            +     A N A      T  SH   ++ R    +  +G  +   +         A  P+ 
Sbjct: 1208 NSANLLARNAA------TSVSHPQLSVLRRPTNVSDEGTLKNANLPPARASIEAAVSPQK 1261

Query: 994  QP-LTKDTSLHSVSKEKDSMESKAQFPVSGGGRGKRYVYTVKTXXXXXXAPTPRVNRSDS 1052
            QP L+ ++ L S    +     K+ F     G   +   +         + T  V+R DS
Sbjct: 1262 QPELSGNSQLPS----RKMSHGKSNFAERQSGYQVQTDTSAVRNSGLRSSGTAEVSRVDS 1317

Query: 1053 RGFTRRPNRNIQRTEFRVRESTDKRQSSGAVLTDQFGLDSKSNXXXXXXXXXXXXXPRKA 1112
             G  RR  R  QR EFRVRES            +    D   N              +  
Sbjct: 1318 GG-NRRYRR--QRVEFRVRES------------NWPSSDENRNGNGRAQTSTKIGSRKYV 1362

Query: 1113 FANKLGKQTVESSGENSHGVD---SGSRTDKVDGKESTKIQSIS-HSGQNILKRNLCSEE 1168
             +NK  KQ ++SS    + +    SG   +   GK++     +S +SGQ  LKRN+ SE+
Sbjct: 1363 VSNKSQKQALDSSASGLNAMQKTVSGGSFENRLGKDAVVKNPLSPNSGQANLKRNMVSEK 1422

Query: 1169 DVDAPLQSGIIRVFEQPGIEAPSDEDDFIEVRSKRQMLNDRREQREKEIRAKSRLAKVPR 1228
            ++DAPLQ GI+RVFEQ GIEAPSD+DDFIEVRSKRQMLNDRREQREKEI+ KS+ AK  R
Sbjct: 1423 EIDAPLQIGIVRVFEQQGIEAPSDDDDFIEVRSKRQMLNDRREQREKEIKEKSQAAKAFR 1482

Query: 1229 KIHSTSRSTVTMAHSSKGSISTREVTKNSDYVAAEVRGMAKIDASSGFNSNLMSQALPPI 1288
            K  ST ++  T A S++   ++R                        FN     Q L PI
Sbjct: 1483 KPRSTFQNNTTAARSNRSPPASRAANNKQ------------------FNPVSNRQTLAPI 1524

Query: 1289 GTPPLKLDAQPDLRSQTNRSLHTS--LPSVSSGEKDPGSGAIFENKNKVLDNVQTSLGSW 1346
            GTP  K+D+  D +S +N+S   S  LP +   +++P SG +F NKNKVLDN  T +G+W
Sbjct: 1525 GTPSPKIDSHVDEKSGSNKSTQESSALPVIPKNDQNPASGFVFSNKNKVLDNSHTPVGTW 1584

Query: 1347 GNVQISQQVMALTQTQLDEAMKPQQFDSQASVGNMTGAVNEPSLPTSSILTKEKTFSSVA 1406
            GN    Q VMALTQ+QLDEAMKP    S  SV N    ++E +  ++S++ K  TFSS  
Sbjct: 1585 GNQLTYQPVMALTQSQLDEAMKPVSHLSCVSVENGANRISESNSTSTSVVPKNNTFSSST 1644

Query: 1407 SPINSLLAGEKIQFGAVTSPTILPPSSRAVSHGIGPRRSSRPDMQLSHNLAGSDNDCSLF 1466
            SPINSLLA  KIQFGAVTS T++PP         G R               ++ D SL+
Sbjct: 1645 SPINSLLAEGKIQFGAVTSSTVIPP--------CGGR---------------TEKDSSLY 1681

Query: 1467 FDKE-KHGNGSHGHLEDCDXXXXXXXXXXXXXXXXIGSDEIVGNRLGTCSVSISDAKSFV 1525
            F+K+ KH N S   +E C+                  +DE  GN L T SV   + K + 
Sbjct: 1682 FEKDNKHRNPSSTGIEICEAEAEAAASAIAVAAIT--NDETSGNALSTGSVLPVETKIYG 1739

Query: 1526 AADIDRVVAGVXXXXXXXXXXXXXXPLIVSLPADLSVETPPISLWPPLPNTQNSSGQMIS 1585
              ++D   A                 LIVSLPADLSV+T PISLWP LP+  NS+ QMI+
Sbjct: 1740 GTELDDGAASGTVGGQTSRSKAEES-LIVSLPADLSVDT-PISLWPQLPSPHNSN-QMIT 1796

Query: 1586 HFASVXXXXXXXXXXXXXXYEMNPMMGGPVFAFGPHDESASTTQSQPQKGTAPASRPMGN 1645
            HF                 Y++NPM+ GP+FAFGPH + A  TQSQ QKG    S P   
Sbjct: 1797 HFP--------PGPPHYPFYDVNPMLRGPIFAFGPHHD-AGATQSQSQKGPVTVSGPPTT 1847

Query: 1646 W-QQCHSGVESFYXXXXXXXXXXXXXXXXXXXXXXXXHMVVYNHFAPVGQFGQVGLSFMG 1704
            W QQ HSGV+SFY                        HM VYNHFAPVGQFG  GLSFMG
Sbjct: 1848 WQQQGHSGVDSFYAPPAGFTGPFLTPPGAIPGVQGPPHMFVYNHFAPVGQFG--GLSFMG 1905

Query: 1705 TTYIPSGKQPDWKHIP-TSSAMGAGEGDMNSMNMASSQRNPANMPSQIQHXXXXXXXXXX 1763
            TTYIPSGKQPDWKH P  SS+   G+GD+N+ N+AS Q N   +P+ +QH          
Sbjct: 1906 TTYIPSGKQPDWKHNPNVSSSPVGGDGDVNNPNVASMQCN--IVPASLQH---------- 1953

Query: 1764 XXXXXXFDVSPFQPSS-EMPVQARWPQVPNAPLSSIPLSMPLHQQEGVQNSQLSHGPSAD 1822
                  FD SPFQ SS EMP++ARWP +   P S  P      QQEG   S L   PS  
Sbjct: 1954 -LPMPMFDPSPFQSSSQEMPIRARWPYM---PFSGPPTMQMQKQQEGTDGSNL---PSP- 2005

Query: 1823 SPLNVKRFNSSRTSSSDGERTFPRGADVNVNQLPDELGLVDTSHSNAAKTSAQNVVNKTS 1882
                  +FN++        R +P   +V  + + D   +VD+S++ ++ T A        
Sbjct: 2006 ------QFNNNMLPPPPPNR-YP---NVQASTVVD--AMVDSSNAYSSTTGAP----PAK 2049

Query: 1883 PVTTDSDSAKVDVQNGNGSKSNSQHANPAFKSHPSQQINVSNQQYDHSSGHANYQRGGAS 1942
            P +T SD    + QN NG         P FK  P QQ   S+Q+ +  S H     GG S
Sbjct: 2050 PTSTLSDPNSNNTQNPNG---------PGFKP-PQQQQQQSSQEKNTQSQHV----GGPS 2095

Query: 1943 QRNSSGGEWSHRRMGYQGRNQNMGADKNF-SSSKVKQIYVAKQT 1985
              +       +RR GY GRNQ M  ++ F ++ KVKQIYVAKQT
Sbjct: 2096 HHHQHQHH-QNRRSGYHGRNQPMARERGFPNNPKVKQIYVAKQT 2138