Miyakogusa Predicted Gene
- Lj0g3v0306579.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0306579.1 Non Chatacterized Hit- tr|D7TFE1|D7TFE1_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,72.73,0,coiled-coil,NULL; seg,NULL; PRONE,Plant specific Rop
nucleotide exchanger, PRONE; SUBFAMILY NOT NAME,CUFF.20659.1
(443 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G31650.1 | Symbols: ATROPGEF14, ROPGEF14 | RHO guanyl-nucleot... 548 e-156
AT4G38430.1 | Symbols: ATROPGEF1, ROPGEF1 | rho guanyl-nucleotid... 291 8e-79
AT5G02010.1 | Symbols: ATROPGEF7, ROPGEF7 | RHO guanyl-nucleotid... 285 3e-77
AT5G05940.1 | Symbols: ATROPGEF5, ROPGEF5 | ROP guanine nucleoti... 283 2e-76
AT4G00460.2 | Symbols: ATROPGEF3, ROPGEF3 | RHO guanyl-nucleotid... 273 1e-73
AT4G13240.1 | Symbols: ATROPGEF9, ROPGEF9 | RHO guanyl-nucleotid... 269 4e-72
AT3G24620.1 | Symbols: ATROPGEF8, ROPGEF8 | RHO guanyl-nucleotid... 268 6e-72
AT1G79860.1 | Symbols: ATROPGEF12, ROPGEF12, MEE64 | RHO guanyl-... 267 1e-71
AT3G16130.1 | Symbols: ATROPGEF13, ROPGEF13, PIRF2 | RHO guanyl-... 263 2e-70
AT1G01700.1 | Symbols: ATROPGEF2, ROPGEF2 | RHO guanyl-nucleotid... 257 1e-68
AT1G52240.1 | Symbols: ATROPGEF11, ROPGEF11, PIRF1 | RHO guanyl-... 253 2e-67
AT5G19560.1 | Symbols: ATROPGEF10, ROPGEF10 | ROP uanine nucleot... 250 1e-66
AT3G55660.1 | Symbols: ATROPGEF6, ROPGEF6 | ROP (rho of plants) ... 250 1e-66
AT2G45890.1 | Symbols: ATROPGEF4, ROPGEF4, RHS11 | RHO guanyl-nu... 244 1e-64
AT4G00460.1 | Symbols: ATROPGEF3, ROPGEF3 | RHO guanyl-nucleotid... 202 3e-52
>AT1G31650.1 | Symbols: ATROPGEF14, ROPGEF14 | RHO guanyl-nucleotide
exchange factor 14 | chr1:11326474-11329767 REVERSE
LENGTH=576
Length = 576
Score = 548 bits (1413), Expect = e-156, Method: Compositional matrix adjust.
Identities = 273/458 (59%), Positives = 343/458 (74%), Gaps = 20/458 (4%)
Query: 1 MLLIRKRLTCCARETKISIDYDE--PDRIMTYNGLEGCILDNQSYEDESRTSRGDGCITX 58
M+L+R+RL CC+RE +ISID+DE D+++TY GLE CI++NQSYE+ES TSRGDGC+T
Sbjct: 1 MMLMRRRLACCSREREISIDFDEHEQDKMITYYGLETCIINNQSYEEESGTSRGDGCLTD 60
Query: 59 XXXXXX-XXXXXXXXXXXXXXXKCLPMKRDEHGLEDWELSE----------------SPQ 101
K LPMK DEH + LS S Q
Sbjct: 61 SLDDDAFSSCSSSKDASSSFSSKWLPMKNDEHSCDGLNLSGRSQHFDAKEKKKQGYGSSQ 120
Query: 102 HFYMKEKPASTVQYSDVEAMKEKFAKLLLGDDVTGGTKGSNTALALSNAITNLAVTVFGE 161
HF KEKP + DVEAMKEKF+KLLLG+DVTGG KG ALALSNA+T+LA ++FGE
Sbjct: 121 HFDAKEKPGYVYCHLDVEAMKEKFSKLLLGEDVTGGCKGVQVALALSNAVTHLATSIFGE 180
Query: 162 LWKLEPLSEERKNKWRREMDWFLSPTNYMVELVPAKQNGANGGIFEIMTPKARADIGMNL 221
LWKLEPL EE+K KWRREMDW LSPTNYM+ELVP+KQN ANG EIMTPKARADI MNL
Sbjct: 181 LWKLEPLCEEKKQKWRREMDWLLSPTNYMIELVPSKQNDANGRSLEIMTPKARADIHMNL 240
Query: 222 PALHKLDSMLIEALDSMVHTEFCYAKGASQAEGRNTSGKQSKRWWLPSPQVPATGLSDTE 281
PAL KLDSMLIE LDSMV+TEF Y++ S+AEG+N S +SKRWWLPSPQVP GLS++
Sbjct: 241 PALQKLDSMLIETLDSMVNTEFWYSEIGSRAEGKNKSTSESKRWWLPSPQVPKPGLSNSG 300
Query: 282 RKRLLHQGRIVHQVFKAAKAINDNVLLEMPVPSIIKDALLKSGKATLGEQLHKVLMAESN 341
RK+LL +G++V+QVFKA KAIN+N+LLEMPVP +IK+A+ KSGK +LG++L+K+L ES
Sbjct: 301 RKKLLDKGKVVYQVFKATKAINENILLEMPVPIVIKEAIPKSGKNSLGDELYKMLAVESA 360
Query: 342 SGEEILESLNLKSEHSALETINRLEAATFSWKERV-KQEQNGRSPLRTSWSFKKDPVSGM 400
+ +EI SLNL +EH+ALET+N+LE+A F+WKER+ +Q NG+SP+R SWSF KDP+S +
Sbjct: 361 TVDEIFISLNLGTEHAALETVNKLESAMFAWKERITEQGSNGKSPVRASWSFAKDPLSEI 420
Query: 401 DKMETLLDRAETLIKQLKTEYPNLPQTFLDAAKVQYGK 438
+ E+LL+RAE L Q+K+++PNLP +FLDA K+QY K
Sbjct: 421 GRNESLLNRAEALRTQIKSKHPNLPHSFLDATKIQYDK 458
>AT4G38430.1 | Symbols: ATROPGEF1, ROPGEF1 | rho guanyl-nucleotide
exchange factor 1 | chr4:17986643-17988659 FORWARD
LENGTH=548
Length = 548
Score = 291 bits (744), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 154/332 (46%), Positives = 216/332 (65%), Gaps = 9/332 (2%)
Query: 116 SDVEAMKEKFAKLLLGDDVTGGTKGSNTALALSNAITNLAVTVFGELWKLEPLSEERKNK 175
S++E MKE+FAKLLLG+D++GG KG TALA+SNAITNL+ TVFGELW+LEPL+ ++K
Sbjct: 89 SEIEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLEPLAPQKKAM 148
Query: 176 WRREMDWFLSPTNYMVELVPAKQNGANGGIFEIMTPKARADIGMNLPALHKLDSMLIEAL 235
WRRE++W L ++ +VEL+P+ Q GG +EIM + R+D+ NLPAL KLD+MLI+ L
Sbjct: 149 WRRELEWLLCVSDSIVELIPSIQQFPGGGTYEIMETRPRSDLYANLPALKKLDAMLIDML 208
Query: 236 DSMVHTEFCYAK-----GASQAEGRNT--SGKQSKRWWLPSPQVPATGLSDTERKRLLHQ 288
D+ TEF Y G + N+ S +Q +WWLP P+VP GLS+ RK+L
Sbjct: 209 DAFSDTEFWYTDRGIVLGDCDKDSYNSPASVRQEDKWWLPCPKVPPNGLSEEARKKLQQC 268
Query: 289 GRIVHQVFKAAKAINDNVLLEMPVPSIIKDALLKSGKATLGEQLHKVLMAESNSGEEILE 348
+Q+ KAA AIN VL EM +P + L KSGK LGE +++ L A S E +L+
Sbjct: 269 RDFANQILKAALAINSGVLAEMEIPDPYLETLPKSGKECLGEIIYQYLTANKFSPECLLD 328
Query: 349 SLNLKSEHSALETINRLEAATFSWKERVKQEQNGRSPLR-TSWSFK-KDPVSGMDKMETL 406
L+L SEH LE NR+EAA W+++ + ++ L+ +SW K K V+ ++ + L
Sbjct: 329 CLDLSSEHQTLEIANRIEAAVHVWRQKNGRRHKKQAKLKLSSWGGKVKGLVNDNERNDFL 388
Query: 407 LDRAETLIKQLKTEYPNLPQTFLDAAKVQYGK 438
+ RAETL++ L+ +P LPQT LD K+QY K
Sbjct: 389 VQRAETLLQSLRIRFPGLPQTTLDMNKIQYNK 420
>AT5G02010.1 | Symbols: ATROPGEF7, ROPGEF7 | RHO guanyl-nucleotide
exchange factor 7 | chr5:383493-385698 FORWARD
LENGTH=546
Length = 546
Score = 285 bits (730), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 147/342 (42%), Positives = 218/342 (63%), Gaps = 11/342 (3%)
Query: 106 KEKPASTVQYSDVEAMKEKFAKLLLGDDVTGGTKGSNTALALSNAITNLAVTVFGELWKL 165
K+K S + S+VE MKE+F+KLLLG+D++G G TALA+SNAITNL T+FG+LW+L
Sbjct: 59 KKKIRSDSRVSEVEMMKERFSKLLLGEDMSGSGNGVCTALAISNAITNLCATLFGQLWRL 118
Query: 166 EPLSEERKNKWRREMDWFLSPTNYMVELVPAKQNGANGGIFEIMTPKARADIGMNLPALH 225
EPL E+K WRREM+W L ++++VE+ P Q +G EIMT + R+D+ +NLPAL
Sbjct: 119 EPLPTEKKEMWRREMEWLLCVSDHIVEMTPTWQTFPDGTKLEIMTCRPRSDLYVNLPALR 178
Query: 226 KLDSMLIEALDSMVHTEFCYAKGA-----SQAEG----RNTSGKQSKRWWLPSPQVPATG 276
KLD+ML+E LDS TEF Y S A+G R + +Q +WWLP P+V G
Sbjct: 179 KLDNMLLEILDSFEETEFWYVDQGIMAHESAADGSSSFRKSFQRQEDKWWLPVPRVSPGG 238
Query: 277 LSDTERKRLLHQGRIVHQVFKAAKAINDNVLLEMPVPSIIKDALLKSGKATLGEQLHKVL 336
L + RK+L H+ +Q+ KAA AIN L +M +P ++L + G++ LG+ +++ +
Sbjct: 239 LQENSRKQLQHKRDCTNQILKAAMAINSITLADMEIPESYLESLPRKGRSCLGDLIYRYI 298
Query: 337 MAESNSGEEILESLNLKSEHSALETINRLEAATFSWKERVKQEQNGRSPLRTSWSFKKDP 396
++ S E +L+ L+L SEH A+E NR+E++ + W +R + + +TSW K+
Sbjct: 299 SSDQFSPECLLDCLDLSSEHQAIEIANRVESSIYLWHKRTNSKPATNT--KTSWEMVKEL 356
Query: 397 VSGMDKMETLLDRAETLIKQLKTEYPNLPQTFLDAAKVQYGK 438
+ DK+E + DRAE+L+ LK +P LPQT LD +K+QY K
Sbjct: 357 MVDADKLELMADRAESLLLSLKQRFPGLPQTALDMSKIQYNK 398
>AT5G05940.1 | Symbols: ATROPGEF5, ROPGEF5 | ROP guanine nucleotide
exchange factor 5 | chr5:1786028-1788363 FORWARD
LENGTH=611
Length = 611
Score = 283 bits (723), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 146/341 (42%), Positives = 218/341 (63%), Gaps = 12/341 (3%)
Query: 110 ASTVQYSDVEAMKEKFAKLLLGDDVTGGTKGSNTALALSNAITNLAVTVFGELWKLEPLS 169
A + +DVE MKE+FAKLLLG+D++G KG TALA+SNAITNL T+FG+LW+LEPLS
Sbjct: 95 AKEMNSADVEMMKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATIFGQLWRLEPLS 154
Query: 170 EERKNKWRREMDWFLSPTNYMVELVPAKQNGANGGIFEIMTPKARADIGMNLPALHKLDS 229
E+K WRREM+W LS ++++VEL P+ Q +G FE+MT + R D+ +NLPAL KLD+
Sbjct: 155 SEKKEMWRREMEWILSVSDHIVELTPSTQTYPDGNKFEVMTCRPRFDLFINLPALRKLDN 214
Query: 230 MLIEALDSMVHTEFCYAKG---ASQAEG----RNTSGKQSKRWWLPSPQVPATGLSDTER 282
ML++ L S TEF Y AS+ +G R +Q ++WWLP P++ GL++ R
Sbjct: 215 MLLDILASFKKTEFWYVDQGIVASENDGSASFRRKIQRQEEKWWLPVPRLAPNGLTEEAR 274
Query: 283 KRLLHQGRIVHQVFKAAKAINDNVLLEMPVPSIIKDALLKSGKATLGEQLHKVLMAESNS 342
L H+ Q+ KAA AIN L EM VP + L K+G++ LG+ +++ + ++ S
Sbjct: 275 TELNHKRECATQILKAAMAINSLALTEMDVPKSYLETLPKNGRSCLGDVIYRYVTSDKFS 334
Query: 343 GEEILESLNLKSEHSALETINRLEAATFSWKERVK-----QEQNGRSPLRTSWSFKKDPV 397
E +L+ L+L SEH AL+ NR+EA+ + W+ RV+ + + +W K+ +
Sbjct: 335 AESLLDCLDLSSEHIALDIANRVEASIYVWRRRVQTKLGVNNNTSSTTPKLTWEMVKELM 394
Query: 398 SGMDKMETLLDRAETLIKQLKTEYPNLPQTFLDAAKVQYGK 438
+ DK L++R+ETL++ LK +P+L QT LD +K+Q+ K
Sbjct: 395 AAGDKRGLLVERSETLLRCLKQRFPSLTQTSLDISKIQWNK 435
>AT4G00460.2 | Symbols: ATROPGEF3, ROPGEF3 | RHO guanyl-nucleotide
exchange factor 3 | chr4:211146-213094 REVERSE
LENGTH=473
Length = 473
Score = 273 bits (699), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 148/339 (43%), Positives = 217/339 (64%), Gaps = 25/339 (7%)
Query: 117 DVEAMKEKFAKLLLGDDVTGGTKGSNTALALSNAITNLAVTVFGELWKLEPLSEERKNKW 176
++E MKE+FAKLLLG+D++G KG TA+ +SNAITNL TVFG+ +LEPL E++ W
Sbjct: 104 ELETMKERFAKLLLGEDMSGSGKGVCTAVTISNAITNLYATVFGQNLRLEPLETEKRALW 163
Query: 177 RREMDWFLSPTNYMVELVPAKQNGANGGIFEIMTPKARADIGMNLPALHKLDSMLIEALD 236
+REM+ LS +Y+VE +P QN +NG E+M + RADI +NLPAL KLDSML+EALD
Sbjct: 164 KREMNCLLSVCDYIVEFIPRCQNLSNGATVEVMESRPRADIYINLPALRKLDSMLMEALD 223
Query: 237 SMVHTEFCYAK--GASQAEGRNTSG--------KQSKRWWLPSPQVPATGLSDTERKRLL 286
S +TEF YA+ S R+++G ++ ++WWLP P VP+ GLSD RK+L
Sbjct: 224 SFQNTEFWYAEEGSLSMKSARSSTGSFRKVIVQRKEEKWWLPVPLVPSEGLSDKARKQLK 283
Query: 287 HQGRIVHQVFKAAKAINDNVLLEMPVPSIIKDALLKSGKATLGEQLHKVLMAESNSG--- 343
++ +Q+ KAA AIN ++L EM +P L K GK+++G+ +++ + S SG
Sbjct: 284 NKRESTNQIHKAAMAINSSILSEMEIPDSYMTTLPKCGKSSVGDSIYRYM---SGSGRFF 340
Query: 344 -EEILESLNLKSEHSALETINRLEAATFSWKERVKQEQNGRSPLRTSWSFKKDPVSG--- 399
E++L+ LN+ SEH A++ +R+EA+ ++W+ + + S + SW+ KD +S
Sbjct: 341 PEQLLDCLNISSEHEAVQLADRVEASMYTWRRK-----SCLSNSKNSWNMVKDLMSTTER 395
Query: 400 MDKMETLLDRAETLIKQLKTEYPNLPQTFLDAAKVQYGK 438
DK + +RAETL+ LK YP L QT LD K+QY K
Sbjct: 396 TDKNYVMAERAETLLFCLKQRYPELSQTSLDICKIQYNK 434
>AT4G13240.1 | Symbols: ATROPGEF9, ROPGEF9 | RHO guanyl-nucleotide
exchange factor 9 | chr4:7680153-7682414 FORWARD
LENGTH=517
Length = 517
Score = 269 bits (687), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 142/327 (43%), Positives = 213/327 (65%), Gaps = 12/327 (3%)
Query: 114 QYSDVEAMKEKFAKLLLGDDVTGGTKGSNTALALSNAITNLAVTVFGELWKLEPLSEERK 173
Q S+ E MK++F KLLLG+D++GG KG ++ALALSNAITNLA ++FGE KL+P++ +R+
Sbjct: 71 QQSETEMMKDRFTKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQTKLQPMAPDRR 130
Query: 174 NKWRREMDWFLSPTNYMVELVPAKQNGANGGIFEIMTPKARADIGMNLPALHKLDSMLIE 233
+W++E+DW LS T+++VE VP++Q G EIM + R D+ MN+PAL KLD+MLI+
Sbjct: 131 ARWKKEIDWLLSVTDHIVEFVPSQQISKEGVCTEIMVTRQRGDLLMNIPALRKLDAMLID 190
Query: 234 ALDSMV-HTEFCYAKGASQAEGRNTSGKQSK-RWWLPSPQVPATGLSDTERKRLLHQGRI 291
LD+ H EF Y S+ EG+ +++K +WWLP +VP GLS++ R+ L Q
Sbjct: 191 TLDNFRGHNEFWYVSRDSE-EGKQARNERTKDKWWLPPVKVPPNGLSESARRMLHFQKDS 249
Query: 292 VHQVFKAAKAINDNVLLEMPVPSIIKDALLKSGKATLGEQLHKVLMAESNSGEEILESLN 351
V QV KAA AIN VL EM +P ++L K+G+ +LG+ L+K + E E+ L +L+
Sbjct: 250 VSQVQKAAMAINAQVLSEMAIPDSYIESLPKNGRVSLGDSLYKSITEEWFDPEQFLSTLD 309
Query: 352 LKSEHSALETINRLEAATFSWKERVKQEQNGRSPLRTSWSFKKDPVSGMDKMETLLDRAE 411
L +EH L+ NR+EA+ WK ++ + N ++SW ++K E +RAE
Sbjct: 310 LSTEHKVLDVKNRIEASIVIWKRKLHLKDN-----KSSWG----SAVSLEKRELFEERAE 360
Query: 412 TLIKQLKTEYPNLPQTFLDAAKVQYGK 438
T++ LK ++P LPQ+ LD +K+QY K
Sbjct: 361 TILVLLKQKFPGLPQSSLDISKIQYNK 387
>AT3G24620.1 | Symbols: ATROPGEF8, ROPGEF8 | RHO guanyl-nucleotide
exchange factor 8 | chr3:8980695-8982793 REVERSE
LENGTH=523
Length = 523
Score = 268 bits (685), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 138/326 (42%), Positives = 211/326 (64%), Gaps = 10/326 (3%)
Query: 114 QYSDVEAMKEKFAKLLLGDDVTGGTKGSNTALALSNAITNLAVTVFGELWKLEPLSEERK 173
Q +D+E MK++FAKLLLG+D++GG KG ++ALALSNAITNLA ++FGE KL+P+ ++R+
Sbjct: 82 QQADMEMMKDRFAKLLLGEDMSGGGKGVSSALALSNAITNLAASIFGEQTKLQPMPQDRQ 141
Query: 174 NKWRREMDWFLSPTNYMVELVPAKQNGANGGIFEIMTPKARADIGMNLPALHKLDSMLIE 233
+W++E+DW LS T+++VE VP++Q +G EIM + R D+ MN+PAL KLD+MLI+
Sbjct: 142 ARWKKEIDWLLSVTDHIVEFVPSQQTSKDGVCTEIMVTRQRGDLLMNIPALRKLDAMLID 201
Query: 234 ALDSMV-HTEFCYAKGASQAEGRNTSGKQSKRWWLPSPQVPATGLSDTERKRLLHQGRIV 292
LD+ H EF Y S+ + + + + +WWLP +VP GLS+ R+ L Q V
Sbjct: 202 TLDNFRGHNEFWYVSRDSEEGQQARNDRTNDKWWLPPVKVPPGGLSEPSRRMLYFQKDSV 261
Query: 293 HQVFKAAKAINDNVLLEMPVPSIIKDALLKSGKATLGEQLHKVLMAESNSGEEILESLNL 352
QV KAA AIN VL EM +P D+L K+G+A+LG+ ++K + E E+ L L++
Sbjct: 262 TQVQKAAMAINAQVLSEMEIPESYIDSLPKNGRASLGDSIYKSITEEWFDPEQFLAMLDM 321
Query: 353 KSEHSALETINRLEAATFSWKERVKQEQNGRSPLRTSWSFKKDPVSGMDKMETLLDRAET 412
+EH L+ NR+EA+ WK ++ + ++SW ++K E +RAET
Sbjct: 322 STEHKVLDLKNRIEASVVIWKRKLHTKDT-----KSSWG----SAVSLEKRELFEERAET 372
Query: 413 LIKQLKTEYPNLPQTFLDAAKVQYGK 438
++ LK ++P LPQ+ LD +K+Q+ K
Sbjct: 373 ILVLLKQKFPGLPQSSLDISKIQFNK 398
>AT1G79860.1 | Symbols: ATROPGEF12, ROPGEF12, MEE64 | RHO
guanyl-nucleotide exchange factor 12 |
chr1:30042172-30044092 REVERSE LENGTH=515
Length = 515
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 139/327 (42%), Positives = 215/327 (65%), Gaps = 17/327 (5%)
Query: 116 SDVEAMKEKFAKLLLGDDVTGGTKGSNTALALSNAITNLAVTVFGELWKLEPLSEERKNK 175
+D+E MKE+F+KLLLG+D +GG KG ++ALALSNAITNLA +VFGE +LEP+ ER+ +
Sbjct: 91 ADMEQMKERFSKLLLGEDNSGGGKGVSSALALSNAITNLAASVFGEQRRLEPMPAERRAR 150
Query: 176 WRREMDWFLSPTNYMVELVPAKQNGANGGIFEIMTPKARADIGMNLPALHKLDSMLIEAL 235
WR+E+DW LS T+Y+VE P++Q +G EIMT + R D+ MN+PAL KLD+MLI+ L
Sbjct: 151 WRKEIDWLLSVTDYVVEFAPSQQKNKDGTNMEIMTTRQRTDLHMNIPALKKLDAMLIDCL 210
Query: 236 DSMV-HTEFCY-AKGASQAEGRNTSGKQSKRWWLPSPQVPATGLSDTERKRLLHQGRIVH 293
++ +EF Y +K + +G+ + ++WW+P+ +VP GLS+ R+ L +Q V+
Sbjct: 211 ENFKDQSEFSYISKDSPDLDGK----RNDEKWWIPTVKVPPDGLSEASRRFLQYQKDCVN 266
Query: 294 QVFKAAKAINDNVLLEMPVPSIIKDALLKSGKATLGEQLHKVLMAESNSGEEILESLNLK 353
QV KAA AIN VL EM +P D+L K+G+A+LG+Q++K + + ++ L S+++
Sbjct: 267 QVLKAAMAINAQVLFEMEIPESYIDSLPKNGRASLGDQMYKNITVDFFDPDQFLSSMDMS 326
Query: 354 SEHSALETINRLEAATFSWKERVKQEQNGRSPLRTSWSFKKDPVSG--MDKMETLLDRAE 411
SEH ++ NR+EA+ WK ++ + N S W+ SG ++K E +RAE
Sbjct: 327 SEHKIVDLKNRIEASIIIWKRKMVYKDNKSS---APWA------SGVSLEKREVFEERAE 377
Query: 412 TLIKQLKTEYPNLPQTFLDAAKVQYGK 438
T++ LK YP + Q+ LD +K+Q+ +
Sbjct: 378 TILLILKQRYPGISQSSLDISKIQFNE 404
>AT3G16130.1 | Symbols: ATROPGEF13, ROPGEF13, PIRF2 | RHO
guanyl-nucleotide exchange factor 13 |
chr3:5466246-5468512 FORWARD LENGTH=576
Length = 576
Score = 263 bits (671), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 135/325 (41%), Positives = 204/325 (62%), Gaps = 10/325 (3%)
Query: 116 SDVEAMKEKFAKLLLGDDVTGGTKGSNTALALSNAITNLAVTVFGELWKLEPLSEERKNK 175
+++E MK+KFAKLLLG+D++GG+KG ++ALALSNAITNLA + FGE+ +LE +SE++K +
Sbjct: 127 TELEQMKDKFAKLLLGEDMSGGSKGVSSALALSNAITNLAASAFGEIRRLEAISEDKKER 186
Query: 176 WRREMDWFLSPTNYMVELVPAKQNGANGGIFEIMTPKARADIGMNLPALHKLDSMLIEAL 235
WRRE+ W LS T+++VE P Q +G E+MT K R D+ N+P+L KLD ML++ L
Sbjct: 187 WRREIGWLLSVTDHIVEFSPTHQTNEDGSSMEVMTTKQRTDLVSNIPSLKKLDEMLLDCL 246
Query: 236 DSMV-HTEFCYAKGASQAEGRNTSGKQSKRWWLPSPQVPATGLSDTERKRLLHQGRIVHQ 294
D EF Y S + S + +WWLP +VP GLS+T ++ LL Q V Q
Sbjct: 247 DKFKDQDEFYYVTPGSPESENSNSTRNDDKWWLPIVKVPPKGLSETLKRFLLSQRECVCQ 306
Query: 295 VFKAAKAINDNVLLEMPVPSIIKDALLKSGKATLGEQLHKVLMAESNSGEEILESLNLKS 354
V +A AIN VL EM +P D+L K G+A+LG+ +++++ E E+ L ++L S
Sbjct: 307 VLNSAMAINSQVLTEMEIPESYIDSLPKKGRASLGDMIYRMITLEMFDAEQFLLEMDLSS 366
Query: 355 EHSALETINRLEAATFSWKERVKQEQN-GRSPLRTSWSFKKDPVSGMDKMETLLDRAETL 413
EH L+ N+ EA+ W+ ++ Q N SP T+ S MDK + L +RA T+
Sbjct: 367 EHKILDLKNKFEASVVIWQRKIVQIDNKSSSPWSTNLS--------MDKRQQLEERAATI 418
Query: 414 IKQLKTEYPNLPQTFLDAAKVQYGK 438
++ +K E+P + Q+ LD +K+Q+ +
Sbjct: 419 LQLIKQEFPGISQSTLDISKIQFNR 443
>AT1G01700.1 | Symbols: ATROPGEF2, ROPGEF2 | RHO guanyl-nucleotide
exchange factor 2 | chr1:259495-261474 REVERSE
LENGTH=485
Length = 485
Score = 257 bits (656), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 146/355 (41%), Positives = 217/355 (61%), Gaps = 24/355 (6%)
Query: 98 ESPQHFYMKEKPASTVQYSDVEAMKEKFAKLLLGDDVTGGTKGSNTALALSNAITNLAVT 157
E+ +H ++E + ++E MKE+F+KLLLG+D++G KG TA+ +SNAITNL T
Sbjct: 102 ETDEHLAVQE-----ISEPELETMKERFSKLLLGEDMSGSGKGVCTAVTISNAITNLYAT 156
Query: 158 VFGELWKLEPLSEERKNKWRREMDWFLSPTNYMVELVPAKQNGANGGIFEIMTPKARADI 217
VFG+ +LEPL E+K W+REM+ LS +Y+ E +P QN +NG E+M + RADI
Sbjct: 157 VFGQNLRLEPLEIEQKTTWKREMNCLLSVCDYIFEFIPKSQNLSNGATVEVMESRPRADI 216
Query: 218 GMNLPALHKLDSMLIEALDSMVHTEFCYAKGASQA--EGRNTSG--------KQSKRWWL 267
+NLPAL KLDSML+EALDS TEF YA+ S + R+ +G ++ ++WWL
Sbjct: 217 YINLPALRKLDSMLMEALDSFQKTEFWYAEEGSLSMKSTRSATGSFRKVIVQRKEEKWWL 276
Query: 268 PSPQVPATGLSDTERKRLLHQGRIVHQVFKAAKAINDNVLLEMPVPSIIKDALLKSGKAT 327
P P VP GLS+ RK+L + +Q+ KAA AIN ++L EM +P L KSGKA+
Sbjct: 277 PIPLVPLQGLSEKARKQLKSKRESTNQIHKAAMAINSSILGEMDIPDSYMATLPKSGKAS 336
Query: 328 LGEQLHKVLMAESN-SGEEILESLNLKSEHSALETINRLEAATFSWKERVKQEQNGRSPL 386
G+ +++ + + S E++L+ L + SEH AL+ +R+EA+ ++W+ + +
Sbjct: 337 TGDAIYRHMTSSGRFSPEKLLDRLKIVSEHEALQLADRVEASMYTWRRKACLNNS----- 391
Query: 387 RTSWSFKKDPVS---GMDKMETLLDRAETLIKQLKTEYPNLPQTFLDAAKVQYGK 438
++SW+ KD +S DK L +RAE+L+ LK YP L QT LD K+ K
Sbjct: 392 KSSWNMVKDLMSITERSDKNYVLAERAESLLFCLKQRYPELSQTSLDICKIHCNK 446
>AT1G52240.1 | Symbols: ATROPGEF11, ROPGEF11, PIRF1 | RHO
guanyl-nucleotide exchange factor 11 |
chr1:19455766-19459235 REVERSE LENGTH=607
Length = 607
Score = 253 bits (645), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 134/324 (41%), Positives = 206/324 (63%), Gaps = 17/324 (5%)
Query: 118 VEAMKEKFAKLLLGDDVTGGTKGSNTALALSNAITNLAVTVFGELWKLEPLSEERKNKWR 177
+E MKEKF+KLLLG+D++GG KG ++ALALSNAITNLA + FGE +LEP++ +RK +WR
Sbjct: 169 MEQMKEKFSKLLLGEDMSGGGKGVSSALALSNAITNLAASAFGEQRRLEPMAVDRKTRWR 228
Query: 178 REMDWFLSPTNYMVELVPAKQNGANGGIFEIMTPKARADIGMNLPALHKLDSMLIEALDS 237
RE+ W +S +Y+VE P +Q +G E+M+ + R D+ N+PAL KLD+ML++ LD
Sbjct: 229 REIGWLISVADYIVEFAPTQQTNKDGTSMEVMSTRQRTDLLCNIPALKKLDAMLLDCLDK 288
Query: 238 MV-HTEFCYAKGAS--QAEGRNTSGKQSKRWWLPSPQVPATGLSDTERKRLLHQGRIVHQ 294
EF Y K S E RN ++WWLP+ +VP GLS+ R+ L Q V+Q
Sbjct: 289 FKDQDEFYYVKKDSPDSCETRN-----DEKWWLPAVKVPPNGLSEISRRFLQSQKECVNQ 343
Query: 295 VFKAAKAINDNVLLEMPVPSIIKDALLKSGKATLGEQLHKVLMAESNSGEEILESLNLKS 354
V KAA AIN VL EM +P ++L K+G+A+LG+ +++++ E ++ L ++L S
Sbjct: 344 VLKAAMAINAQVLSEMEIPESYLESLPKNGRASLGDVIYRMITVEMFDADQFLIEMDLSS 403
Query: 355 EHSALETINRLEAATFSWKERVKQEQNGRSPLRTSWSFKKDPVSGMDKMETLLDRAETLI 414
EH L+ NR+EA+ WK ++ Q ++ +SP ++ S ++K E +RAET++
Sbjct: 404 EHKILDLKNRIEASIVIWKRKMVQ-KDTKSPWGSTVS--------IEKREQFEERAETIL 454
Query: 415 KQLKTEYPNLPQTFLDAAKVQYGK 438
LK +P + Q+ LD +K+Q+ +
Sbjct: 455 LLLKQGFPGISQSSLDISKIQFNR 478
>AT5G19560.1 | Symbols: ATROPGEF10, ROPGEF10 | ROP uanine nucleotide
exchange factor 10 | chr5:6603291-6606130 FORWARD
LENGTH=493
Length = 493
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 138/325 (42%), Positives = 204/325 (62%), Gaps = 10/325 (3%)
Query: 116 SDVEAMKEKFAKLLLGDDVTGGTKGSNTALALSNAITNLAVTVFGELWKLEPLSEERKNK 175
SD+E MKE+FAKLLLG+D++GG G +ALALSNAIT LA ++FGE KL+P+ E K
Sbjct: 43 SDMEVMKERFAKLLLGEDMSGGGTGETSALALSNAITKLADSMFGEQMKLQPMYPETKEN 102
Query: 176 WRREMDWFLSPTNYMVELVPAKQNGANGGIFEIMTPKARADIGMNLPALHKLDSMLIEAL 235
WR+EM W LS +++V+ VP++Q G NG EIM K R D+ N+PAL KLDS+L+E L
Sbjct: 103 WRKEMGWLLSVIDHIVQFVPSRQMGKNGQFTEIMVTKQRDDLLTNIPALRKLDSVLLETL 162
Query: 236 DSMV-HTEFCYAKGASQAEGRNTSGKQSKRWWLPSPQVPATGLSDTERKRLLHQGRIVHQ 294
D+ +F Y + N ++ + WWLP +VP GLS+ R+ L +Q V Q
Sbjct: 163 DNFKDQKDFWYVPRDMEDADHNGDWRRDENWWLPVVKVPTDGLSEESRRWLQNQKDSVAQ 222
Query: 295 VFKAAKAINDNVLLEMPVPSIIKDALLKSGKATLGEQLHKVLMAESNSGEEILESLNLKS 354
V KAA AIN +VL EM VP D+L K+GK +LG+ L+K + ES + + L+L +
Sbjct: 223 VLKAATAINAHVLSEMHVPENYIDSLPKNGKTSLGDFLYKSITEESFDPDYFVSFLDLST 282
Query: 355 EHSALETINRLEAATFSWKERV-KQEQNGRSPLRTSWSFKKDPVSGMDKMETLLDRAETL 413
EH L+ NR+EA+ WK ++ ++E++G+S ++ S ++K E RAET+
Sbjct: 283 EHKVLDLKNRIEASMVIWKRKMCQKEKDGKSQWGSTVS--------LEKRELFEVRAETI 334
Query: 414 IKQLKTEYPNLPQTFLDAAKVQYGK 438
+ LK ++P +PQ+ L+ +K++ K
Sbjct: 335 LVMLKQQFPGIPQSSLEVSKIKNNK 359
>AT3G55660.1 | Symbols: ATROPGEF6, ROPGEF6 | ROP (rho of plants)
guanine nucleotide exchange factor 6 |
chr3:20649051-20651290 REVERSE LENGTH=579
Length = 579
Score = 250 bits (638), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 136/334 (40%), Positives = 206/334 (61%), Gaps = 9/334 (2%)
Query: 114 QYSDVEAMKEKFAKLLLGDDVTGGTKGSNTALALSNAITNLAVTVFGELWKLEPLSEERK 173
+ S++E +KE+ AKLLLG+D++G +G ALA+SNAITNL + G+ W+LEP+ E+K
Sbjct: 104 ETSEIELLKERMAKLLLGEDMSGSGEGVCPALAISNAITNLYAAILGQQWRLEPIPSEKK 163
Query: 174 NKWRREMDWFLSPTNYMVELVPAKQNGANGGIFEIMTPKARADIGMNLPALHKLDSMLIE 233
WRRE++ LS ++++VELVP+ QN NG E+M + R+D+ LPAL KLD+MLIE
Sbjct: 164 LMWRREIEVLLSVSDHIVELVPSFQNFPNGNKIEVMNCRPRSDLFTCLPALRKLDNMLIE 223
Query: 234 ALDSMVHTEFCYA-KGASQAEG--RNTSGKQSKRWWLPSPQVPATGLSDTERKRLLHQGR 290
LDS TEF Y +G AE N+ + +WWLP P+VP+ GL++ RK+L H
Sbjct: 224 ILDSFGETEFWYVDQGIVAAESARSNSFREDGDKWWLPLPRVPSDGLTEQTRKKLDHTRE 283
Query: 291 IVHQVFKAAKAINDNVLLEMPVPSIIKDALLKSGKATLGEQLHKVLMAESNSGEEILESL 350
+Q+ KA +IN L EM VP +AL K+G++ LG+ L++ + +++ S + +LES+
Sbjct: 284 FTNQILKACMSINSIALAEMEVPQSYLEALPKNGRSCLGDFLYRNITSDNFSADHLLESI 343
Query: 351 NLKSEHSALETINRLEAATFSWKERVKQEQ--NGRSPLRTSWSFKKDPV----SGMDKME 404
+L SE + +E NR+EA+ + W+ R + T W + + DK E
Sbjct: 344 DLSSELAVVEMANRVEASMYVWRRRAHSRHLISLYRSTSTRWGMIVKEMMMHQTDGDKRE 403
Query: 405 TLLDRAETLIKQLKTEYPNLPQTFLDAAKVQYGK 438
+RAE+L+ +LK +P L QT LD +K+QY K
Sbjct: 404 IFAERAESLLIRLKQRFPGLRQTALDTSKIQYNK 437
>AT2G45890.1 | Symbols: ATROPGEF4, ROPGEF4, RHS11 | RHO
guanyl-nucleotide exchange factor 4 |
chr2:18883540-18885440 FORWARD LENGTH=463
Length = 463
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 142/340 (41%), Positives = 206/340 (60%), Gaps = 25/340 (7%)
Query: 116 SDVEAMKEKFAKLLLGDDVTGGTKGSNTALALSNAITNLAVTVFGELWKLEPLSEERKNK 175
+++E M+E+FAKLLLG+D++G KG TA+ +SN+ITNL TVFG+ +L+PLS E+K+
Sbjct: 92 AELEMMRERFAKLLLGEDMSGSGKGVCTAVTVSNSITNLYATVFGQSLRLQPLSTEKKDL 151
Query: 176 WRREMDWFLSPTNYMVELVPAKQNGANGGIFEIMTPKARADIGMNLPALHKLDSMLIEAL 235
W+REM+ F+S +Y+VE++P + G N EI K R+DI M+LPAL KLD+ML+E L
Sbjct: 152 WKREMNCFMSICDYIVEVIP-RSLGTN---VEITETKLRSDILMSLPALRKLDNMLMEIL 207
Query: 236 DSMVHTEFCYAKGASQAEGRNTSGKQS------------KRWWLPSPQVPATGLSDTERK 283
DS EF Y + S + G+ S ++WWLP P VPA GLS+ ERK
Sbjct: 208 DSFTENEFWYVERGSSSMNSGGGGRDSGTFRKVVVQRKDEKWWLPVPCVPAEGLSEEERK 267
Query: 284 RLLHQGRIVHQVFKAAKAINDNVLLEMPVPSIIKDALLKSGKATLGEQLHKVL-MAESNS 342
L H+ Q+ KAA AIND+ L +M +P L KSGKA++G+ ++K L AE
Sbjct: 268 HLRHKRDCASQIHKAALAINDSTLNDMDIPDSYLTTLPKSGKASVGDVIYKQLCTAEKFY 327
Query: 343 GEEILESLNLKSEHSALETINRLEAATFSWKERVKQEQNGRSPLRTSWSFKKDPVS---- 398
+++L+ L + SEH ALE +++EA+ +W+ + G + ++SW KD
Sbjct: 328 PDQLLDILKITSEHEALELADKVEASLVTWRRKT----GGLTHSKSSWDMMKDISGDADR 383
Query: 399 GMDKMETLLDRAETLIKQLKTEYPNLPQTFLDAAKVQYGK 438
G DK L RA +L+ LK YP L QT LD K+Q+ +
Sbjct: 384 GNDKNHILAARARSLLFCLKQRYPELSQTSLDICKIQFNR 423
>AT4G00460.1 | Symbols: ATROPGEF3, ROPGEF3 | RHO guanyl-nucleotide
exchange factor 3 | chr4:211731-213094 REVERSE
LENGTH=337
Length = 337
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 102/207 (49%), Positives = 142/207 (68%), Gaps = 10/207 (4%)
Query: 117 DVEAMKEKFAKLLLGDDVTGGTKGSNTALALSNAITNLAVTVFGELWKLEPLSEERKNKW 176
++E MKE+FAKLLLG+D++G KG TA+ +SNAITNL TVFG+ +LEPL E++ W
Sbjct: 104 ELETMKERFAKLLLGEDMSGSGKGVCTAVTISNAITNLYATVFGQNLRLEPLETEKRALW 163
Query: 177 RREMDWFLSPTNYMVELVPAKQNGANGGIFEIMTPKARADIGMNLPALHKLDSMLIEALD 236
+REM+ LS +Y+VE +P QN +NG E+M + RADI +NLPAL KLDSML+EALD
Sbjct: 164 KREMNCLLSVCDYIVEFIPRCQNLSNGATVEVMESRPRADIYINLPALRKLDSMLMEALD 223
Query: 237 SMVHTEFCYAK--GASQAEGRNTSG--------KQSKRWWLPSPQVPATGLSDTERKRLL 286
S +TEF YA+ S R+++G ++ ++WWLP P VP+ GLSD RK+L
Sbjct: 224 SFQNTEFWYAEEGSLSMKSARSSTGSFRKVIVQRKEEKWWLPVPLVPSEGLSDKARKQLK 283
Query: 287 HQGRIVHQVFKAAKAINDNVLLEMPVP 313
++ +Q+ KAA AIN ++L EM +P
Sbjct: 284 NKRESTNQIHKAAMAINSSILSEMEIP 310