Miyakogusa Predicted Gene

Lj0g3v0306519.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0306519.1 tr|I3SSP2|I3SSP2_LOTJA Cysteine synthase OS=Lotus
japonicus PE=2 SV=1,99.21,0,no description,NULL; PALP,Tryptophan
synthase beta subunit-like PLP-dependent enzymes superfamily;
C,CUFF.20656.1
         (126 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G55880.1 | Symbols:  | Pyridoxal-5'-phosphate-dependent enzym...   227   1e-60
AT1G55880.2 | Symbols:  | Pyridoxal-5'-phosphate-dependent enzym...   100   2e-22

>AT1G55880.1 | Symbols:  | Pyridoxal-5'-phosphate-dependent enzyme
           family protein | chr1:20899292-20901140 REVERSE
           LENGTH=421
          Length = 421

 Score =  227 bits (579), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 107/126 (84%), Positives = 117/126 (92%)

Query: 1   MYTKEEAEGRRLKNPFDTITEGIGINRVTRNFAMAKLDGAFRGTDMEAVEMARFLLKNDG 60
           MYT+EEAEGRRLKNPFDTITEGIGINR+T+NF MAKLDG FRGTD EAVEM+RFLLKNDG
Sbjct: 296 MYTREEAEGRRLKNPFDTITEGIGINRLTKNFLMAKLDGGFRGTDKEAVEMSRFLLKNDG 355

Query: 61  LFLGSSSAMNCVGAVRVAQTLGPGHTIVTILCDSGMRHLSKFYNAEYLSQLGLTPKATGL 120
           LF+GSSSAMNCVGAVRVAQTLGPGHTIVTILCDSGMRHLSKF++ +YL+  GL+P A GL
Sbjct: 356 LFVGSSSAMNCVGAVRVAQTLGPGHTIVTILCDSGMRHLSKFHDPKYLNLYGLSPTAIGL 415

Query: 121 EFLAIK 126
           EFL IK
Sbjct: 416 EFLGIK 421


>AT1G55880.2 | Symbols:  | Pyridoxal-5'-phosphate-dependent enzyme
           family protein | chr1:20899619-20901140 REVERSE
           LENGTH=348
          Length = 348

 Score =  100 bits (250), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 46/53 (86%), Positives = 50/53 (94%)

Query: 1   MYTKEEAEGRRLKNPFDTITEGIGINRVTRNFAMAKLDGAFRGTDMEAVEMAR 53
           MYT+EEAEGRRLKNPFDTITEGIGINR+T+NF MAKLDG FRGTD EAVEM+R
Sbjct: 296 MYTREEAEGRRLKNPFDTITEGIGINRLTKNFLMAKLDGGFRGTDKEAVEMSR 348