Miyakogusa Predicted Gene

Lj0g3v0306399.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0306399.1 Non Chatacterized Hit- tr|I3T6Q6|I3T6Q6_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.49,0,NADH-UBIQUINONE OXIDOREDUCTASE 39 KDA SUBUNIT,NULL;
NADH-UBIQUINONE OXIDOREDUCTASE 39 KDA SUBUNIT-RE,CUFF.20970.1
         (396 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G20360.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfami...   587   e-168

>AT2G20360.1 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily
           protein | chr2:8786070-8789098 FORWARD LENGTH=402
          Length = 402

 Score =  587 bits (1514), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 293/402 (72%), Positives = 349/402 (86%), Gaps = 6/402 (1%)

Query: 1   MQAMARRVVHQSL------KPSTSLKSIYPISDHHYGADHERFVSTIATKGVGHLVRKGT 54
           MQ ++RR+V + L        S+SL+S+Y +S+H  G D+ R+ S++ATKGVGHL RKGT
Sbjct: 1   MQVVSRRLVQRPLVGGASIYSSSSLRSLYGVSNHLNGTDNCRYSSSLATKGVGHLARKGT 60

Query: 55  GGRSSVSGIVATVFGATGFLGRYVVQHLAKMGSQVLVPFRGSEDCHRHLKLMGDLGQVVP 114
           GGRSSVSGIVATVFGATGFLGRY+VQ LAKMGSQVLVPFRGSED  RHLKLMGDLGQVVP
Sbjct: 61  GGRSSVSGIVATVFGATGFLGRYLVQQLAKMGSQVLVPFRGSEDSPRHLKLMGDLGQVVP 120

Query: 115 MKYNPRDESSVKAVMAKANVVINLIGRDFETRNYSYEQVHYHMADQLARISKEHGGIMRF 174
           MK++PRDE S+KAVMAKANVVINLIGR++ETRN+S+E  ++H+A++LA ++KEHGGIMR+
Sbjct: 121 MKFDPRDEDSIKAVMAKANVVINLIGREYETRNFSFEDANHHIAEKLALVAKEHGGIMRY 180

Query: 175 IQVSCLGASPSSPSRMLRAKAAAEEAILRELPEATILKPATMIGTEDRILNRWAHFAKKY 234
           IQVSCLGAS SSPSRMLRAKAAAEEA+L  LPEATI++PATMIGTEDRILN W+ F KKY
Sbjct: 181 IQVSCLGASVSSPSRMLRAKAAAEEAVLNALPEATIMRPATMIGTEDRILNPWSMFVKKY 240

Query: 235 SFLPLFGDGSTKIQPVYVVDVANALTAALKDDGTSMGKVYELGGPEVYTMHELAELMYEV 294
            FLPL G G+TK QPVYVVDVA A+ AALKDDG+SMGK YELGGP+V+T HELAE+MY++
Sbjct: 241 GFLPLIGGGTTKFQPVYVVDVAAAIVAALKDDGSSMGKTYELGGPDVFTTHELAEIMYDM 300

Query: 295 IREWPRYVKVPFPIAKALASPRELLINKLPFPLPTPNIFNLDQIRALTTDTVVSENALTF 354
           IREWPRYVK+PFPIAKA+A+PR+ ++NK+PFPLP+P IFNLDQI ALTTDT+VS+NAL F
Sbjct: 301 IREWPRYVKLPFPIAKAMAAPRDFMVNKVPFPLPSPQIFNLDQINALTTDTLVSDNALKF 360

Query: 355 NDLGINPQKLKGYPTEFLISYRKGGPQFGSTISERVSPDAWP 396
            DL + P KLKGYP EFLI YRKGGP FGST+SE++  D +P
Sbjct: 361 QDLDLVPHKLKGYPVEFLIQYRKGGPNFGSTVSEKIPTDFYP 402