Miyakogusa Predicted Gene

Lj0g3v0306239.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0306239.1 Non Chatacterized Hit- tr|I1LML3|I1LML3_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,83.33,2e-19,seg,NULL;
Guanylate_cyc_2,Guanylyl cyclase,CUFF.20630.1
         (60 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G05930.1 | Symbols: ATGC1, GC1 | guanylyl cyclase 1 | chr5:17...    51   1e-07
AT5G05930.2 | Symbols: GC1 | guanylyl cyclase 1 | chr5:1780270-1...    51   1e-07

>AT5G05930.1 | Symbols: ATGC1, GC1 | guanylyl cyclase 1 |
           chr5:1780270-1782659 REVERSE LENGTH=274
          Length = 274

 Score = 51.2 bits (121), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/45 (55%), Positives = 28/45 (62%)

Query: 2   FEIRDPAXXXXXXXXXXXXLEEARKAFGTDEDLLLISLEKSNNHH 46
           FEIRDPA            LE ARK+FGTDEDLLLI+LE   N +
Sbjct: 228 FEIRDPASSKIHERISSKCLENARKSFGTDEDLLLINLENMRNQN 272


>AT5G05930.2 | Symbols: GC1 | guanylyl cyclase 1 |
           chr5:1780270-1782532 REVERSE LENGTH=210
          Length = 210

 Score = 51.2 bits (121), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/45 (55%), Positives = 28/45 (62%)

Query: 2   FEIRDPAXXXXXXXXXXXXLEEARKAFGTDEDLLLISLEKSNNHH 46
           FEIRDPA            LE ARK+FGTDEDLLLI+LE   N +
Sbjct: 164 FEIRDPASSKIHERISSKCLENARKSFGTDEDLLLINLENMRNQN 208