Miyakogusa Predicted Gene
- Lj0g3v0305599.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0305599.1 tr|G7IPS5|G7IPS5_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_2g0,34.57,2e-18,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; PPR: pentatricopeptide repeat domain,Pent,CUFF.20568.1
(217 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 2e-45
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 1e-41
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 1e-41
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 164 3e-41
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 9e-41
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 1e-40
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 1e-40
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 162 2e-40
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 161 4e-40
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 158 2e-39
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 157 6e-39
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 2e-38
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 154 3e-38
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 153 8e-38
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 152 1e-37
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 152 2e-37
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 2e-37
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 151 4e-37
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 151 4e-37
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 150 7e-37
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 1e-36
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 1e-36
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 1e-36
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 1e-36
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 4e-36
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 6e-36
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 8e-36
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 1e-35
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 2e-35
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 145 2e-35
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 2e-35
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 145 2e-35
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 145 2e-35
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 3e-35
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 3e-35
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 3e-35
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 6e-35
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 7e-35
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 143 7e-35
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 9e-35
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 1e-34
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 143 1e-34
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 1e-34
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 1e-34
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 1e-34
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 2e-34
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 142 2e-34
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 2e-34
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 2e-34
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 141 3e-34
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 140 5e-34
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 140 5e-34
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 140 5e-34
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 1e-33
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 1e-33
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 139 1e-33
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 2e-33
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 2e-33
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 2e-33
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 4e-33
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 138 4e-33
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 6e-33
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 6e-33
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 8e-33
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 136 9e-33
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 136 1e-32
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 136 1e-32
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 135 2e-32
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 3e-32
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 134 4e-32
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 4e-32
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 134 4e-32
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 4e-32
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 5e-32
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 5e-32
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 5e-32
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 6e-32
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 8e-32
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 9e-32
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 133 9e-32
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 1e-31
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 2e-31
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 2e-31
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 2e-31
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 2e-31
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 2e-31
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 132 2e-31
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 2e-31
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 3e-31
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 3e-31
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 3e-31
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 131 4e-31
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 130 6e-31
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 8e-31
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 9e-31
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 129 1e-30
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 2e-30
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 129 2e-30
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 2e-30
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 2e-30
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 3e-30
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 128 3e-30
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 3e-30
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 128 3e-30
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 127 4e-30
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 5e-30
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 5e-30
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 127 7e-30
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 7e-30
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 1e-29
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 1e-29
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 125 1e-29
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 125 2e-29
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 2e-29
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 3e-29
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 4e-29
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 5e-29
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 124 6e-29
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 123 1e-28
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 1e-28
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 2e-28
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 2e-28
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 2e-28
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 122 2e-28
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 2e-28
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 122 2e-28
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 122 2e-28
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 2e-28
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 2e-28
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 2e-28
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 121 3e-28
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 120 5e-28
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 7e-28
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 1e-27
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 119 1e-27
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 1e-27
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 2e-27
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 2e-27
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 2e-27
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 2e-27
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 3e-27
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 3e-27
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 3e-27
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 3e-27
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 4e-27
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 5e-27
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 5e-27
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 6e-27
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 1e-26
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 1e-26
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 2e-26
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 2e-26
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 114 4e-26
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 4e-26
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 114 4e-26
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 4e-26
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 4e-26
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 8e-26
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 1e-25
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 1e-25
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 112 2e-25
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 2e-25
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 2e-25
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 3e-25
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 3e-25
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 5e-25
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 6e-25
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 6e-25
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 7e-25
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 1e-24
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 109 1e-24
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 1e-24
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 2e-24
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 2e-24
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 2e-24
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 2e-24
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 5e-24
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 7e-24
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 1e-23
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 2e-23
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 2e-23
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 3e-23
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 103 1e-22
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 2e-21
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 3e-21
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 1e-20
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 2e-20
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 2e-20
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 3e-20
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 3e-20
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 4e-20
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 7e-20
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 7e-20
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 1e-19
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 6e-19
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 8e-19
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 87 7e-18
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 4e-17
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 6e-17
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 1e-16
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 4e-16
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 1e-15
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 79 2e-15
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 3e-13
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 2e-12
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 65 5e-11
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 5e-11
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 6e-11
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 8e-11
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 8e-11
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 1e-10
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 3e-10
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 62 4e-10
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 4e-10
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 4e-10
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 6e-10
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 2e-09
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-09
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 2e-09
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 2e-09
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 4e-09
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 58 4e-09
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 57 6e-09
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 1e-08
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 57 1e-08
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 2e-08
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 3e-08
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 3e-08
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 55 4e-08
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 55 4e-08
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 5e-08
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 5e-08
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 54 5e-08
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 6e-08
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 6e-08
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 7e-08
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 7e-08
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 7e-08
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 7e-08
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 7e-08
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 9e-08
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 1e-07
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 54 1e-07
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 53 1e-07
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 2e-07
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 3e-07
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 3e-07
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 5e-07
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 6e-07
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 7e-07
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 1e-06
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 2e-06
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 2e-06
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 2e-06
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 2e-06
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 3e-06
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 48 5e-06
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 6e-06
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 6e-06
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 47 7e-06
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 8e-06
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 8e-06
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 179 bits (453), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 87/218 (39%), Positives = 125/218 (57%), Gaps = 1/218 (0%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +R+V SW L+ Y + G E + FK+MVD PN+AT
Sbjct: 147 MPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDF 206
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+WVH Y +T G V N+ NAL++MY KCG + + + +F ++ +D ISW T+I GLA
Sbjct: 207 GKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLA 266
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAM-RDSYLVPQM 179
+GHG EA+ LF M G+ PD VTF+G+LC C H GLV +G +F +M D ++P++
Sbjct: 267 AHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEI 326
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
H GC+VD+ RAG +A F+ M V+A+ IW L
Sbjct: 327 EHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATL 364
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 76/198 (38%), Gaps = 43/198 (21%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
+RD++ W T++ Y+ G+ EA ++F QM CR+
Sbjct: 87 ERDIVLWNTMISGYIEMGNMLEARSLFDQM-PCRDV----------------------MS 123
Query: 63 WVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMN 122
W N +L Y GDM +FD + ++ SW +I G A N
Sbjct: 124 W------------------NTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQN 165
Query: 123 GHGKEAVQLFSLMLVQG-VQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRD-SYLVPQMR 180
G E + F M+ +G V P+D T +L C+ G G K Y +
Sbjct: 166 GRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVN 225
Query: 181 HYGCMVDMYGRAGLFEEA 198
++DMYG+ G E A
Sbjct: 226 VKNALIDMYGKCGAIEIA 243
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 166 bits (420), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 127/215 (59%), Gaps = 3/215 (1%)
Query: 4 RDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQW 63
R+ +SWT ++ Y + G EA+ VF++M+ EP+E T +
Sbjct: 213 RNEVSWTCVISGYAKSGRASEAIEVFQRML-MENVEPDEVTLLAVLSACADLGSLELGER 271
Query: 64 VHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNG 123
+ SY+D RG + ++ NA+++MY K G++ L +F+ + ++ ++W T+I GLA +G
Sbjct: 272 ICSYVDHRG-MNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHG 330
Query: 124 HGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV-PQMRHY 182
HG EA+ +F+ M+ GV+P+DVTFI +L CSH G V G F +MR Y + P + HY
Sbjct: 331 HGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHY 390
Query: 183 GCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
GCM+D+ GRAG EA+ +++M +A IWG+L
Sbjct: 391 GCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSL 425
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 2/127 (1%)
Query: 74 LVVGGNIGNALLNMYVKCGDMHMGLTIFDMLE--HKDFISWGTVICGLAMNGHGKEAVQL 131
LV N+ NALL Y K G+M ++ +M+ ++ +SW VI G A +G EA+++
Sbjct: 178 LVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEV 237
Query: 132 FSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGR 191
F ML++ V+PD+VT + +L C+ G + G + + + ++DMY +
Sbjct: 238 FQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAK 297
Query: 192 AGLFEEA 198
+G +A
Sbjct: 298 SGNITKA 304
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 166 bits (419), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 128/216 (59%), Gaps = 3/216 (1%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
++D++ WTT++ AYV + +EA+ VF++M C +P+ + +
Sbjct: 306 KKDLVCWTTMISAYVESDYPQEALRVFEEMC-CSGIKPDVVSMFSVISACANLGILDKAK 364
Query: 63 WVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMN 122
WVHS I G L +I NAL+NMY KCG + +F+ + ++ +SW ++I L+M+
Sbjct: 365 WVHSCIHVNG-LESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMH 423
Query: 123 GHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQMRH 181
G +A+ LF+ M + V+P++VTF+G+L CSH GLV EG F +M D Y + P++ H
Sbjct: 424 GEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEH 483
Query: 182 YGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
YGCMVD++GRA L EA + +M V + IWG+L
Sbjct: 484 YGCMVDLFGRANLLREALEVIESMPVASNVVIWGSL 519
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 94/223 (42%), Gaps = 31/223 (13%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
MS RDV++W T++ Y R G +EA +F++M D P+E
Sbjct: 172 MSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKD-SNVMPDEMILCNIVSACGRTGNMRY 230
Query: 61 XQWVHSYI---DTRGDL---------------------------VVGGNIGNALLNMYVK 90
+ ++ ++ D R D V + A+++ Y K
Sbjct: 231 NRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSK 290
Query: 91 CGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGL 150
CG + IFD E KD + W T+I + + +EA+++F M G++PD V+ +
Sbjct: 291 CGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSV 350
Query: 151 LCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAG 193
+ C++ G++ + + + L ++ +++MY + G
Sbjct: 351 ISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCG 393
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 57/128 (44%)
Query: 80 IGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQG 139
+ ++MY CG ++ +FD + H+D ++W T+I G EA +LF M
Sbjct: 148 VETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSN 207
Query: 140 VQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAE 199
V PD++ ++ C G + ++ + ++ + +V MY AG + A
Sbjct: 208 VMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAR 267
Query: 200 AFLRAMLV 207
F R M V
Sbjct: 268 EFFRKMSV 275
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 164 bits (416), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 122/218 (55%), Gaps = 2/218 (0%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M Q+D+++W L+ AY + G EA+ VF ++ + + N+ T
Sbjct: 324 MPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALEL 383
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+W+HSYI G + + ++ +AL++MY KCGD+ +F+ +E +D W +I GLA
Sbjct: 384 GRWIHSYIKKHG-IRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLA 442
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQM 179
M+G G EAV +F M V+P+ VTF + C CSH GLV E F M +Y +VP+
Sbjct: 443 MHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEE 502
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+HY C+VD+ GR+G E+A F+ AM + +WGAL
Sbjct: 503 KHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGAL 540
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 94/219 (42%), Gaps = 6/219 (2%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ + + +W TL+ AY G ++ F MV + PN+ T
Sbjct: 90 IPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSL 149
Query: 61 XQWVHSYIDTRGDLVVGGNI--GNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICG 118
Q +H VG ++ N+L++ Y CGD+ +F ++ KD +SW ++I G
Sbjct: 150 GQSLHGMAVKSA---VGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMING 206
Query: 119 LAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQ 178
G +A++LF M + V+ VT +G+L C+ + G + ++ +
Sbjct: 207 FVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVN 266
Query: 179 MRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+ M+DMY + G E+A+ AM E + W +
Sbjct: 267 LTLANAMLDMYTKCGSIEDAKRLFDAM-EEKDNVTWTTM 304
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 101/237 (42%), Gaps = 34/237 (14%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ ++DV+SW +++ +V+ G ++A+ +FK+M + + + + T
Sbjct: 192 IKEKDVVSWNSMINGFVQKGSPDKALELFKKM-ESEDVKASHVTMVGVLSACAKIRNLEF 250
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ V SYI+ + V + NA+L+MY KCG + +FD +E KD ++W T++ G A
Sbjct: 251 GRQVCSYIE-ENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYA 309
Query: 121 M-------------------------------NGHGKEAVQLF-SLMLVQGVQPDDVTFI 148
+ NG EA+ +F L L + ++ + +T +
Sbjct: 310 ISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLV 369
Query: 149 GLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAEAFLRAM 205
L C+ G + G ++ + ++ MY + G E++ ++
Sbjct: 370 STLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSV 426
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 163 bits (412), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 84/221 (38%), Positives = 124/221 (56%), Gaps = 9/221 (4%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M RD ISWT ++ Y+R G E++ +F++M P+E T
Sbjct: 328 MPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMI-PDEFTMVSVLTACAHLGSLEI 386
Query: 61 XQWVHSYIDT---RGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVIC 117
+W+ +YID + D+VVG NAL++MY KCG +F ++ +D +W ++
Sbjct: 387 GEWIKTYIDKNKIKNDVVVG----NALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVV 442
Query: 118 GLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMR-DSYLV 176
GLA NG G+EA+++F M +QPDD+T++G+L C+H G+V + FF MR D +
Sbjct: 443 GLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIE 502
Query: 177 PQMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
P + HYGCMVDM GRAGL +EA LR M + +WGAL
Sbjct: 503 PSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGAL 543
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 93/237 (39%), Gaps = 39/237 (16%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
+ DV SW ++ Y R EE++ + +M + P T +
Sbjct: 198 KEDVFSWNLMISGYNRMKEYEESIELLVEM-ERNLVSPTSVTLLLVLSACSKVKDKDLCK 256
Query: 63 WVHSYID---TRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGL 119
VH Y+ T L + NAL+N Y CG+M + + IF ++ +D ISW +++ G
Sbjct: 257 RVHEYVSECKTEPSL----RLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGY 312
Query: 120 AMNGHGK-------------------------------EAVQLFSLMLVQGVQPDDVTFI 148
G+ K E++++F M G+ PD+ T +
Sbjct: 313 VERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMV 372
Query: 149 GLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAEAFLRAM 205
+L C+H G + G + + + + ++DMY + G E+A+ M
Sbjct: 373 SVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDM 429
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 56/132 (42%), Gaps = 2/132 (1%)
Query: 76 VGGN--IGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFS 133
+G N + NAL+ MY CG M M +FD +D SW +I G +E+++L
Sbjct: 166 LGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLV 225
Query: 134 LMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAG 193
M V P VT + +L CS + + + P +R +V+ Y G
Sbjct: 226 EMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACG 285
Query: 194 LFEEAEAFLRAM 205
+ A R+M
Sbjct: 286 EMDIAVRIFRSM 297
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 162 bits (411), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 129/218 (59%), Gaps = 3/218 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M++++ ISWTT++ YV+ +EA+ +F +M + + EP+ +
Sbjct: 207 MAEKNAISWTTMISGYVQADMNKEALQLFHEMQNS-DVEPDNVSLANALSACAQLGALEQ 265
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+W+HSY++ + + + +G L++MY KCG+M L +F ++ K +W +I G A
Sbjct: 266 GKWIHSYLN-KTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYA 324
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAM-RDSYLVPQM 179
+GHG+EA+ F M G++P+ +TF +L CS+ GLV EG + F +M RD L P +
Sbjct: 325 YHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTI 384
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HYGC+VD+ GRAGL +EA+ F++ M ++ IWGAL
Sbjct: 385 EHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGAL 422
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 2/118 (1%)
Query: 82 NALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQ 141
N+++ YVK G M + LT+F + K+ ISW T+I G KEA+QLF M V+
Sbjct: 185 NSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVE 244
Query: 142 PDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGC-MVDMYGRAGLFEEA 198
PD+V+ L C+ G + +G + + + GC ++DMY + G EEA
Sbjct: 245 PDNVSLANALSACAQLGALEQGKWIHSYLNKTR-IRMDSVLGCVLIDMYAKCGEMEEA 301
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 162 bits (411), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/224 (38%), Positives = 133/224 (59%), Gaps = 8/224 (3%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAE----PNEATXXXXXXXXXXXX 56
M +R+VISW+ L+ YV G +EA+ +F++M + E PNE T
Sbjct: 154 MPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLG 213
Query: 57 XXXXXQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDML-EHKDFISWGTV 115
+WVH+YID + + + +G AL++MY KCG + +F+ L KD ++ +
Sbjct: 214 ALEQGKWVHAYID-KYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAM 272
Query: 116 ICGLAMNGHGKEAVQLFSLMLVQ-GVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY 174
IC LAM G E QLFS M + P+ VTF+G+L C H+GL++EG +FK M + +
Sbjct: 273 ICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEF 332
Query: 175 -LVPQMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+ P ++HYGCMVD+YGR+GL +EAE+F+ +M +E + IWG+L
Sbjct: 333 GITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSL 376
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 7/142 (4%)
Query: 82 NALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQG-- 139
N+++N Y K G + +FD + ++ ISW +I G M G KEA+ LF M +
Sbjct: 132 NSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPN 191
Query: 140 ---VQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYG-CMVDMYGRAGLF 195
V+P++ T +L C G + +G + A D Y V G ++DMY + G
Sbjct: 192 EAFVRPNEFTMSTVLSACGRLGALEQGK-WVHAYIDKYHVEIDIVLGTALIDMYAKCGSL 250
Query: 196 EEAEAFLRAMLVEAEGPIWGAL 217
E A+ A+ + + + A+
Sbjct: 251 ERAKRVFNALGSKKDVKAYSAM 272
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 162 bits (410), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/219 (41%), Positives = 123/219 (56%), Gaps = 4/219 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +R ++SW +++ Y + G EEA+ +F M+D A P++ T
Sbjct: 277 MPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIA-PDKVTFLSVIRASMIQGCSQL 335
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
Q +H+Y+ G V I AL+NMY K GD F+ LE KD I+W VI GLA
Sbjct: 336 GQSIHAYVSKTG-FVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLA 394
Query: 121 MNGHGKEAVQLFSLMLVQG-VQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQ 178
+GHG EA+ +F M +G PD +T++G+L CSH GLV EG +F MRD + L P
Sbjct: 395 SHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPT 454
Query: 179 MRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+ HYGCMVD+ RAG FEEAE ++ M V+ IWGAL
Sbjct: 455 VEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGAL 493
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 92/206 (44%), Gaps = 8/206 (3%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ Q +V++W +L+ +V +A+ F++M + NE
Sbjct: 168 IPQWNVVAWGSLISGFVNNNRFSDAIEAFREM-QSNGVKANETIMVDLLVACGRCKDIVT 226
Query: 61 XQWVHSYI-----DTRGDLVVGGNI--GNALLNMYVKCGDMHMGLTIFDMLEHKDFISWG 113
+W H ++ D VG N+ +L++MY KCGD+ +FD + + +SW
Sbjct: 227 GKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWN 286
Query: 114 TVICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDS 173
++I G + NG +EA+ +F ML G+ PD VTF+ ++ +G G + +
Sbjct: 287 SIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKT 346
Query: 174 YLVPQMRHYGCMVDMYGRAGLFEEAE 199
V +V+MY + G E A+
Sbjct: 347 GFVKDAAIVCALVNMYAKTGDAESAK 372
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 87/208 (41%), Gaps = 10/208 (4%)
Query: 6 VISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWVH 65
V W +++ Y + ++A+ +++M+ + P+ T VH
Sbjct: 72 VYIWNSMIRGYSNSPNPDKALIFYQEMLR-KGYSPDYFTFPYVLKACSGLRDIQFGSCVH 130
Query: 66 SYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHG 125
++ G V + LL+MY+ CG+++ GL +F+ + + ++WG++I G N
Sbjct: 131 GFVVKTG-FEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRF 189
Query: 126 KEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMR----DSYLVPQMRH 181
+A++ F M GV+ ++ + LL C + G F ++ D Y ++
Sbjct: 190 SDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGF 249
Query: 182 Y----GCMVDMYGRAGLFEEAEAFLRAM 205
++DMY + G A M
Sbjct: 250 NVILATSLIDMYAKCGDLRTARYLFDGM 277
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 161 bits (407), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 82/218 (37%), Positives = 125/218 (57%), Gaps = 3/218 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ ++V++WT ++ Y G +EA + QMV + + A
Sbjct: 275 LPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMV-ASGLKFDAAAVISILAACTESGLLSL 333
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+HS + R +L + NALL+MY KCG++ +F+ + KD +SW T++ GL
Sbjct: 334 GMRIHSIL-KRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLG 392
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQM 179
++GHGKEA++LFS M +G++PD VTFI +LC C+H GL+ EG +F +M Y LVPQ+
Sbjct: 393 VHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQV 452
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HYGC+VD+ GR G +EA ++ M +E IWGAL
Sbjct: 453 EHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGAL 490
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 82/200 (41%), Gaps = 43/200 (21%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M QRD+ISW T++ Y R +A +F++M P T
Sbjct: 211 MPQRDLISWNTMLDGYARCREMSKAFELFEKM-------PERNTV--------------- 248
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDM--LEHKDFISWGTVICG 118
W +V+G Y K GDM M +FD L K+ ++W +I G
Sbjct: 249 -SW--------STMVMG----------YSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAG 289
Query: 119 LAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQ 178
A G KEA +L M+ G++ D I +L C+ GL+S G ++ S L
Sbjct: 290 YAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSN 349
Query: 179 MRHYGCMVDMYGRAGLFEEA 198
++DMY + G ++A
Sbjct: 350 AYVLNALLDMYAKCGNLKKA 369
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 158 bits (400), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 125/220 (56%), Gaps = 5/220 (2%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMV-DCREAEPNEATXXXXXXXXXXXXXXX 59
M R+V+SW+ ++ Y + G EA+ F++M+ + +++ PN T
Sbjct: 243 MPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALE 302
Query: 60 XXQWVHSYIDTRG-DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICG 118
+ +H YI RG D ++ + +AL+ MY +CG + +G +FD + +D +SW ++I
Sbjct: 303 QGKLIHGYILRRGLDSILP--VISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISS 360
Query: 119 LAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAM-RDSYLVP 177
++G+GK+A+Q+F ML G P VTF+ +L CSH+GLV EG F+ M RD + P
Sbjct: 361 YGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKP 420
Query: 178 QMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
Q+ HY CMVD+ GRA +EA ++ M E +WG+L
Sbjct: 421 QIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSL 460
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 80/200 (40%), Gaps = 8/200 (4%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXX- 61
+R + W L A GH EE + ++ +M E + T
Sbjct: 140 KRTIYVWNALFRALTLAGHGEEVLGLYWKMNRI-GVESDRFTYTYVLKACVASECTVNHL 198
Query: 62 ---QWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICG 118
+ +H+++ RG I L++MY + G + +F + ++ +SW +I
Sbjct: 199 MKGKEIHAHLTRRG-YSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIAC 257
Query: 119 LAMNGHGKEAVQLFSLML--VQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV 176
A NG EA++ F M+ + P+ VT + +L C+ + +G + + L
Sbjct: 258 YAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLD 317
Query: 177 PQMRHYGCMVDMYGRAGLFE 196
+ +V MYGR G E
Sbjct: 318 SILPVISALVTMYGRCGKLE 337
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 157 bits (396), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 128/219 (58%), Gaps = 4/219 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ RDV++WT +++ Y + G EA+ +F+ MV + PN T
Sbjct: 373 LKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQ-RPNSYTLAAMLSVASSLASLSH 431
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLE-HKDFISWGTVICGL 119
+ +H G+ + ++ NAL+ MY K G++ FD++ +D +SW ++I L
Sbjct: 432 GKQIHGSAVKSGE-IYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIAL 490
Query: 120 AMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRD-SYLVPQ 178
A +GH +EA++LF ML++G++PD +T++G+ C+H GLV++G +F M+D ++P
Sbjct: 491 AQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPT 550
Query: 179 MRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+ HY CMVD++GRAGL +EA+ F+ M +E + WG+L
Sbjct: 551 LSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSL 589
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 92/236 (38%), Gaps = 38/236 (16%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ QRD +SWTT+++ Y G +A+ V MV EP + T
Sbjct: 106 LPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVK-EGIEPTQFTLTNVLASVAATRCMET 164
Query: 61 XQWVHSYIDTRGDLVVGGNIG--NALLNMYVKCGD------------------------- 93
+ VHS+I G + GN+ N+LLNMY KCGD
Sbjct: 165 GKKVHSFIVKLG---LRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIAL 221
Query: 94 ------MHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQG-VQPDDVT 146
M + + F+ + +D ++W ++I G G+ A+ +FS ML + PD T
Sbjct: 222 HMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFT 281
Query: 147 FIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAEAFL 202
+L C++ + G + + ++ MY R G E A +
Sbjct: 282 LASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLI 337
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 100/250 (40%), Gaps = 34/250 (13%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M++RD+++W +++ + + G+ A+ +F +M+ P+ T
Sbjct: 238 MAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCI 297
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMY-------------------------------- 88
+ +HS+I T G + G + NAL++MY
Sbjct: 298 GKQIHSHIVTTG-FDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDG 356
Query: 89 -VKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTF 147
+K GDM+ IF L+ +D ++W +I G +G EA+ LF M+ G +P+ T
Sbjct: 357 YIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTL 416
Query: 148 IGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAEAFLRAMLV 207
+L S +S G + S + + ++ MY +AG A +
Sbjct: 417 AAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRC 476
Query: 208 EAEGPIWGAL 217
E + W ++
Sbjct: 477 ERDTVSWTSM 486
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 10/117 (8%)
Query: 82 NALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQ 141
N +L+ Y K GDM FD L +D +SW T+I G G +A+++ M+ +G++
Sbjct: 84 NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIE 143
Query: 142 PDDVTFIGLLC-----RCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAG 193
P T +L RC G + +R + V +++MY + G
Sbjct: 144 PTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSN-----SLLNMYAKCG 195
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 155 bits (392), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/221 (36%), Positives = 125/221 (56%), Gaps = 7/221 (3%)
Query: 2 SQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXX 61
+++DV++W ++ YV G+ +EA+ +FK+M D E P+ T
Sbjct: 236 TEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGE-HPDVVTILSLLSACAVLGDLETG 294
Query: 62 QWVHSYI----DTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVIC 117
+ +H YI + VG I NAL++MY KCG + + +F ++ +D +W T+I
Sbjct: 295 KRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIV 354
Query: 118 GLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV- 176
GLA++ H + ++++F M V P++VTFIG++ CSH G V EG +F MRD Y +
Sbjct: 355 GLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIE 413
Query: 177 PQMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
P ++HYGCMVDM GRAG EEA F+ +M +E +W L
Sbjct: 414 PNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTL 454
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 5/129 (3%)
Query: 82 NALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQ 141
N ++ +KC +M +FD KD ++W +I G G+ KEA+ +F M G
Sbjct: 213 NVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEH 272
Query: 142 PDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYG-----CMVDMYGRAGLFE 196
PD VT + LL C+ G + G + ++ V + G ++DMY + G +
Sbjct: 273 PDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSID 332
Query: 197 EAEAFLRAM 205
A R +
Sbjct: 333 RAIEVFRGV 341
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 154 bits (390), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 121/218 (55%), Gaps = 3/218 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M QR V+SW T++ Y G ++AV VF++M + PN T
Sbjct: 234 MRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKG-DIRPNYVTLVSVLPAISRLGSLEL 292
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+W+H Y + G + + +G+AL++MY KCG + + +F+ L ++ I+W +I G A
Sbjct: 293 GEWLHLYAEDSG-IRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFA 351
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRD-SYLVPQM 179
++G +A+ F M GV+P DV +I LL CSH GLV EG +F M L P++
Sbjct: 352 IHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRI 411
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HYGCMVD+ GR+GL +EAE F+ M ++ + IW AL
Sbjct: 412 EHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKAL 449
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 60/117 (51%)
Query: 82 NALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQ 141
N +++ Y++ GD +FD + + +SW T+I G ++NG K+AV++F M ++
Sbjct: 212 NVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIR 271
Query: 142 PDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEA 198
P+ VT + +L S G + G DS + ++DMY + G+ E+A
Sbjct: 272 PNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKA 328
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 153 bits (387), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 123/219 (56%), Gaps = 3/219 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ +DVISW TL+ Y +EA+ +F++M+ E PN+ T
Sbjct: 327 LPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET-PNDVTMLSILPACAHLGAIDI 385
Query: 61 XQWVHSYIDTRGDLVVGGN-IGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGL 119
+W+H YID R V + + +L++MY KCGD+ +F+ + HK SW +I G
Sbjct: 386 GRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGF 445
Query: 120 AMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQ 178
AM+G + LFS M G+QPDD+TF+GLL CSH G++ G F+ M Y + P+
Sbjct: 446 AMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPK 505
Query: 179 MRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+ HYGCM+D+ G +GLF+EAE + M +E +G IW +L
Sbjct: 506 LEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSL 544
Score = 103 bits (257), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 106/220 (48%), Gaps = 13/220 (5%)
Query: 4 RDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQW 63
+DV+SW ++ Y G+ +EA+ +FK M+ P+E+T +
Sbjct: 229 KDVVSWNAMISGYAETGNYKEALELFKDMMKT-NVRPDESTMVTVVSACAQSGSIELGRQ 287
Query: 64 VHSYIDTRGDLVVGGN--IGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAM 121
VH +ID G G N I NAL+++Y KCG++ +F+ L +KD ISW T+I G
Sbjct: 288 VHLWIDDHG---FGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTH 344
Query: 122 NGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFF----KAMRDSYLVP 177
KEA+ LF ML G P+DVT + +L C+H G + G K ++
Sbjct: 345 MNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNAS 404
Query: 178 QMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+R ++DMY + G E A ++L ++ W A+
Sbjct: 405 SLR--TSLIDMYAKCGDIEAAHQVFNSILHKSLSS-WNAM 441
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 57/117 (48%)
Query: 82 NALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQ 141
AL+ Y G + +FD + KD +SW +I G A G+ KEA++LF M+ V+
Sbjct: 204 TALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 263
Query: 142 PDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEA 198
PD+ T + ++ C+ G + G + D ++ ++D+Y + G E A
Sbjct: 264 PDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETA 320
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 152 bits (385), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 125/218 (57%), Gaps = 3/218 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M QR+ +SW +++ +VR G ++A+ +F++M + ++ +P+ T
Sbjct: 218 MPQRNGVSWNSMISGFVRNGRFKDALDMFREMQE-KDVKPDGFTMVSLLNACAYLGASEQ 276
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+W+H YI R + + AL++MY KCG + GL +F+ K W ++I GLA
Sbjct: 277 GRWIHEYI-VRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLA 335
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV-PQM 179
NG + A+ LFS + G++PD V+FIG+L C+H G V FF+ M++ Y++ P +
Sbjct: 336 NNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSI 395
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+HY MV++ G AGL EEAEA ++ M VE + IW +L
Sbjct: 396 KHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSL 433
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 58/116 (50%)
Query: 82 NALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQ 141
N+++ + KCG + +FD + ++ +SW ++I G NG K+A+ +F M + V+
Sbjct: 196 NSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVK 255
Query: 142 PDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEE 197
PD T + LL C++ G +G + + + ++DMY + G EE
Sbjct: 256 PDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEE 311
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 152 bits (383), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 128/218 (58%), Gaps = 3/218 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M ++DV+ W ++ V+ ++A+A+F++M +P+E T
Sbjct: 349 MEEKDVVLWNAMIGGSVQAKRGQDALALFQEM-QTSNTKPDEITMIHCLSACSQLGALDV 407
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
W+H YI+ + L + +G +L++MY KCG++ L++F ++ ++ +++ +I GLA
Sbjct: 408 GIWIHRYIE-KYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLA 466
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQM 179
++G A+ F+ M+ G+ PD++TFIGLL C H G++ G +F M+ + L PQ+
Sbjct: 467 LHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQL 526
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+HY MVD+ GRAGL EEA+ + +M +EA+ +WGAL
Sbjct: 527 KHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGAL 564
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 98/198 (49%), Gaps = 5/198 (2%)
Query: 5 DVISWTTLVMAYVRGGHCEEAVAVFKQMVD--CREAEPNEATXXXXXXXXXXXXXXXXXQ 62
++ SW + + + +E+ ++KQM+ C E+ P+ T
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH 176
Query: 63 WVHSYI-DTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAM 121
+ ++ R +LV ++ NA ++M+ CGDM +FD +D +SW +I G
Sbjct: 177 MILGHVLKLRLELV--SHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKK 234
Query: 122 NGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRH 181
G ++A+ ++ LM +GV+PDDVT IGL+ CS G ++ G F++ ++++ L +
Sbjct: 235 IGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPL 294
Query: 182 YGCMVDMYGRAGLFEEAE 199
++DM+ + G EA
Sbjct: 295 VNALMDMFSKCGDIHEAR 312
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 95/226 (42%), Gaps = 33/226 (14%)
Query: 4 RDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQW 63
RD++SW L+ Y + G E+A+ V+K M + +P++ T +
Sbjct: 220 RDLVSWNCLINGYKKIGEAEKAIYVYKLM-ESEGVKPDDVTMIGLVSSCSMLGDLNRGKE 278
Query: 64 VHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNG 123
+ Y+ G L + + NAL++M+ KCGD+H IFD LE + +SW T+I G A G
Sbjct: 279 FYEYVKENG-LRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCG 337
Query: 124 -------------------------------HGKEAVQLFSLMLVQGVQPDDVTFIGLLC 152
G++A+ LF M +PD++T I L
Sbjct: 338 LLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLS 397
Query: 153 RCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEA 198
CS G + G + + L + +VDMY + G EA
Sbjct: 398 ACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEA 443
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 152 bits (383), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 122/221 (55%), Gaps = 5/221 (2%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCRE--AEPNEATXXXXXXXXXXXXXX 58
+ +RD +SW L Y+R + + +F +M + + +P+ T
Sbjct: 174 IPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGAL 233
Query: 59 XXXQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICG 118
+ VH +ID G L N+ N L++MY +CG M +F + ++ +SW +I G
Sbjct: 234 DFGKQVHDFIDENG-LSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISG 292
Query: 119 LAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMR--DSYLV 176
LAMNG GKEA++ F+ ML G+ P++ T GLL CSH GLV+EG MFF MR + +
Sbjct: 293 LAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIK 352
Query: 177 PQMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
P + HYGC+VD+ GRA L ++A + +++M ++ + IW L
Sbjct: 353 PNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTL 393
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 151 bits (381), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 119/218 (54%), Gaps = 2/218 (0%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +D+ISW T++ Y + + EA+++F +++ + P+E T
Sbjct: 458 MRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDK 517
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H YI R ++ N+L++MY KCG + + +FD + KD +SW +I G
Sbjct: 518 GREIHGYI-MRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYG 576
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMR-DSYLVPQM 179
M+G GKEA+ LF+ M G++ D+++F+ LL CSH GLV EG FF MR + + P +
Sbjct: 577 MHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTV 636
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HY C+VDM R G +A F+ M + + IWGAL
Sbjct: 637 EHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGAL 674
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 100/208 (48%), Gaps = 2/208 (0%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M++RDVISW +++ YV G E+ ++VF QM+ E + AT
Sbjct: 256 MTERDVISWNSIINGYVSNGLAEKGLSVFVQML-VSGIEIDLATIVSVFAGCADSRLISL 314
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ VHS I + N LL+MY KCGD+ +F + + +S+ ++I G A
Sbjct: 315 GRAVHS-IGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYA 373
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
G EAV+LF M +G+ PD T +L C+ L+ EG + ++++ L +
Sbjct: 374 REGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIF 433
Query: 181 HYGCMVDMYGRAGLFEEAEAFLRAMLVE 208
++DMY + G +EAE M V+
Sbjct: 434 VSNALMDMYAKCGSMQEAELVFSEMRVK 461
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 93/196 (47%), Gaps = 7/196 (3%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
MS R V+S+T+++ Y R G EAV +F++M + P+ T
Sbjct: 357 MSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE-EGISPDVYTVTAVLNCCARYRLLDE 415
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ VH +I DL + NAL++MY KCG M +F + KD ISW T+I G +
Sbjct: 416 GKRVHEWI-KENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYS 474
Query: 121 MNGHGKEAVQLFSLMLVQG-VQPDDVTFIGLLCRCSHKGLVSEGTMFF-KAMRDSYLVPQ 178
N + EA+ LF+L+L + PD+ T +L C+ +G MR+ Y
Sbjct: 475 KNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSD- 533
Query: 179 MRHYG-CMVDMYGRAG 193
RH +VDMY + G
Sbjct: 534 -RHVANSLVDMYAKCG 548
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 85/197 (43%), Gaps = 2/197 (1%)
Query: 9 WTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWVHSYI 68
W L+ + G ++ +FK+M+ E + T + +H +I
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSS-GVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFI 221
Query: 69 DTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEA 128
G ++GN+L+ Y+K + +FD + +D ISW ++I G NG ++
Sbjct: 222 LKSG-FGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKG 280
Query: 129 VQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDM 188
+ +F MLV G++ D T + + C+ L+S G + + R ++DM
Sbjct: 281 LSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDM 340
Query: 189 YGRAGLFEEAEAFLRAM 205
Y + G + A+A R M
Sbjct: 341 YSKCGDLDSAKAVFREM 357
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 64 VHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNG 123
V ++I G V+ N+G+ L MY CGD+ +FD ++ + + W ++ LA +G
Sbjct: 116 VDNFIRGNG-FVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSG 174
Query: 124 HGKEAVQLFSLMLVQGVQPDDVTF 147
++ LF M+ GV+ D TF
Sbjct: 175 DFSGSIGLFKKMMSSGVEMDSYTF 198
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 151 bits (381), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 115/206 (55%), Gaps = 2/206 (0%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M RDV+SW +V AY G E + VF +M+D +P+ T
Sbjct: 263 MPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQ 322
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+WVH YID G + + G + AL++MY KCG + L +F +D +W ++I L+
Sbjct: 323 GEWVHVYIDKHG-IEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLS 381
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV-PQM 179
++G GK+A+++FS M+ +G +P+ +TFIG+L C+H G++ + F+ M Y V P +
Sbjct: 382 VHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTI 441
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAM 205
HYGCMVD+ GR G EEAE + +
Sbjct: 442 EHYGCMVDLLGRMGKIEEAEELVNEI 467
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 42/205 (20%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M RD +SW +L+ AY+ G +EA A+F +M + R E
Sbjct: 201 MPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEE-RNVE--------------------- 238
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
W N +++ Y G + +FD + +D +SW ++ A
Sbjct: 239 -SW------------------NFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYA 279
Query: 121 MNGHGKEAVQLFSLMLVQGVQ-PDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQM 179
G E +++F+ ML + PD T + +L C+ G +S+G + + +
Sbjct: 280 HVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEG 339
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRA 204
+VDMY + G ++A RA
Sbjct: 340 FLATALVDMYSKCGKIDKALEVFRA 364
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 150 bits (379), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 119/218 (54%), Gaps = 2/218 (0%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ DVISW T++ Y + G EA+ ++ M + E N+ T
Sbjct: 410 LPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQ 469
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+H + G L + + +L +MY KCG + L++F + + + W T+I
Sbjct: 470 GMKLHGRLLKNG-LYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHG 528
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQM 179
+GHG++AV LF ML +GV+PD +TF+ LL CSH GLV EG F+ M+ Y + P +
Sbjct: 529 FHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSL 588
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+HYGCMVDMYGRAG E A F+++M ++ + IWGAL
Sbjct: 589 KHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGAL 626
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 96/199 (48%), Gaps = 2/199 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M RD+ISW +++ AY A+++F++M R +P+ T
Sbjct: 308 MYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSR-IQPDCLTLISLASILSQLGDIRA 366
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ V + +G + IGNA++ MY K G + +F+ L + D ISW T+I G A
Sbjct: 367 CRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYA 426
Query: 121 MNGHGKEAVQLFSLMLVQG-VQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQM 179
NG EA++++++M +G + + T++ +L CS G + +G + + L +
Sbjct: 427 QNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDV 486
Query: 180 RHYGCMVDMYGRAGLFEEA 198
+ DMYG+ G E+A
Sbjct: 487 FVVTSLADMYGKCGRLEDA 505
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 83/202 (41%), Gaps = 9/202 (4%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M RD+ SW ++ Y + G+ +EA+ + + + T
Sbjct: 211 MPVRDMGSWNAMISGYCQSGNAKEALTLSNGL-----RAMDSVTVVSLLSACTEAGDFNR 265
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+HSY G L + N L+++Y + G + +FD + +D ISW ++I
Sbjct: 266 GVTIHSYSIKHG-LESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYE 324
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVS--EGTMFFKAMRDSYLVPQ 178
+N A+ LF M + +QPD +T I L S G + F +R + +
Sbjct: 325 LNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGF-TLRKGWFLED 383
Query: 179 MRHYGCMVDMYGRAGLFEEAEA 200
+ +V MY + GL + A A
Sbjct: 384 ITIGNAVVVMYAKLGLVDSARA 405
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 66/156 (42%), Gaps = 22/156 (14%)
Query: 74 LVVGGNIGNA-----LLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEA 128
LVV I N L+N+Y G++ + FD ++++D +W +I G G+ E
Sbjct: 77 LVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEV 136
Query: 129 VQLFSL-MLVQGVQPDDVTFIGLLCRCSHKGLVSEGT------MFFKAMRDSYLVPQMRH 181
++ FSL ML G+ PD TF +L C V +G + F M D Y+ + H
Sbjct: 137 IRCFSLFMLSSGLTPDYRTFPSVLKACR---TVIDGNKIHCLALKFGFMWDVYVAASLIH 193
Query: 182 YGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+Y R A M V G W A+
Sbjct: 194 ------LYSRYKAVGNARILFDEMPVRDMGS-WNAM 222
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 77/209 (36%), Gaps = 10/209 (4%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ RDV +W ++ Y R G+ E + F + P+ T
Sbjct: 112 IQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNK 171
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ D+ V +L+++Y + + +FD + +D SW +I G
Sbjct: 172 IHCLALKFGFMWDVYVAA----SLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYC 227
Query: 121 MNGHGKEAVQLFSLMLVQGVQP-DDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQM 179
+G+ KEA L L G++ D VT + LL C+ G + G L ++
Sbjct: 228 QSGNAKEA-----LTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESEL 282
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVE 208
++D+Y G + + M V
Sbjct: 283 FVSNKLIDLYAEFGRLRDCQKVFDRMYVR 311
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 149 bits (376), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 114/215 (53%), Gaps = 3/215 (1%)
Query: 4 RDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQW 63
RD ISW +LV YV+ G EA+ +F+QMV + +P +
Sbjct: 306 RDGISWNSLVAGYVQNGRYNEALRLFRQMVTAK-VKPGAVAFSSVIPACAHLATLHLGKQ 364
Query: 64 VHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNG 123
+H Y+ RG I +AL++MY KCG++ IFD + D +SW +I G A++G
Sbjct: 365 LHGYV-LRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHG 423
Query: 124 HGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQMRHY 182
HG EAV LF M QGV+P+ V F+ +L CSH GLV E +F +M Y L ++ HY
Sbjct: 424 HGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHY 483
Query: 183 GCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+ D+ GRAG EEA F+ M VE G +W L
Sbjct: 484 AAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTL 518
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 97/217 (44%), Gaps = 3/217 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M ++DV+S+ T++ Y + G E+A+ + ++M + +P+ T
Sbjct: 202 MPRKDVVSYNTIIAGYAQSGMYEDALRMVREM-GTTDLKPDSFTLSSVLPIFSEYVDVIK 260
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H Y+ +G + IG++L++MY K + +F L +D ISW +++ G
Sbjct: 261 GKEIHGYVIRKG-IDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYV 319
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
NG EA++LF M+ V+P V F ++ C+H + G + +
Sbjct: 320 QNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIF 379
Query: 181 HYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+VDMY + G + A M V E W A+
Sbjct: 380 IASALVDMYSKCGNIKAARKIFDRMNVLDEVS-WTAI 415
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 149 bits (376), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 121/218 (55%), Gaps = 3/218 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M R+V++WT L+ YV+ ++ + VF++M+ + PNE T
Sbjct: 266 MPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKS-DVAPNEKTLSSVLSACAHVGALHR 324
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ VH Y+ + + + G L+++YVKCG + + +F+ L K+ +W +I G A
Sbjct: 325 GRRVHCYM-IKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFA 383
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQM 179
+G+ ++A LF ML V P++VTF+ +L C+H GLV EG F +M+ + + P+
Sbjct: 384 AHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKA 443
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HY CMVD++GR GL EEA+A + M +E +WGAL
Sbjct: 444 DHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGAL 481
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 1/195 (0%)
Query: 4 RDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQW 63
+DV++WT ++ +VR G EA+ F +M A NE T +
Sbjct: 167 KDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVA-ANEMTVVSVLKAAGKVEDVRFGRS 225
Query: 64 VHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNG 123
VH G + IG++L++MY KC +FD + ++ ++W +I G +
Sbjct: 226 VHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSR 285
Query: 124 HGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYG 183
+ + +F ML V P++ T +L C+H G + G M + +
Sbjct: 286 CFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGT 345
Query: 184 CMVDMYGRAGLFEEA 198
++D+Y + G EEA
Sbjct: 346 TLIDLYVKCGCLEEA 360
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 13/133 (9%)
Query: 80 IGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQG 139
+ N+L++ Y G +FD E KD ++W +I G NG EA+ F M G
Sbjct: 140 VRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTG 199
Query: 140 VQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGC-------MVDMYGRA 192
V +++T + +L G V E F +++ YL + C +VDMYG+
Sbjct: 200 VAANEMTVVSVL---KAAGKV-EDVRFGRSVHGLYL--ETGRVKCDVFIGSSLVDMYGKC 253
Query: 193 GLFEEAEAFLRAM 205
+++A+ M
Sbjct: 254 SCYDDAQKVFDEM 266
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 149 bits (376), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 127/221 (57%), Gaps = 5/221 (2%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +RDV SW ++ A + G EAV++F++M++ PNE T
Sbjct: 219 MPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQL 278
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H++ R DL + N+L+++Y KCG++ ++F M K +W ++I A
Sbjct: 279 AKGIHAFA-YRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFA 337
Query: 121 MNGHGKEAVQLFSLML---VQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LV 176
++G +EA+ +F M+ + ++PD +TFIGLL C+H GLVS+G +F M + + +
Sbjct: 338 LHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIE 397
Query: 177 PQMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
P++ HYGC++D+ GRAG F+EA + M ++A+ IWG+L
Sbjct: 398 PRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSL 438
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 65/124 (52%), Gaps = 5/124 (4%)
Query: 83 ALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQ-GVQ 141
A+L+ Y + GD+ + +F+ + +D SW ++ NG EAV LF M+ + ++
Sbjct: 198 AMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIR 257
Query: 142 PDDVTFIGLLCRCSHKGL--VSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAE 199
P++VT + +L C+ G +++G F RD L + +VD+YG+ G EEA
Sbjct: 258 PNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRD--LSSDVFVSNSLVDLYGKCGNLEEAS 315
Query: 200 AFLR 203
+ +
Sbjct: 316 SVFK 319
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 149 bits (376), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 120/218 (55%), Gaps = 3/218 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +RD I+W ++ Y + G EA+ VF ++ + N
Sbjct: 200 MPERDPIAWNAMISGYAQVGESREALNVF-HLMQLEGVKVNGVAMISVLSACTQLGALDQ 258
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+W HSYI+ R + + + L+++Y KCGDM + +F +E K+ +W + + GLA
Sbjct: 259 GRWAHSYIE-RNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLA 317
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQM 179
MNG G++ ++LFSLM GV P+ VTF+ +L CS G V EG F +MR+ + + PQ+
Sbjct: 318 MNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQL 377
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HYGC+VD+Y RAG E+A + ++ M ++ +W +L
Sbjct: 378 EHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSL 415
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 61/116 (52%)
Query: 83 ALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQP 142
A++ +CGD+ +F+ + +D I+W +I G A G +EA+ +F LM ++GV+
Sbjct: 179 AMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKV 238
Query: 143 DDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEA 198
+ V I +L C+ G + +G + + + +R +VD+Y + G E+A
Sbjct: 239 NGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKA 294
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 147 bits (372), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 80/226 (35%), Positives = 120/226 (53%), Gaps = 13/226 (5%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVF---KQMVDCREAEPNEATXXXXXXXXXXXXX 57
M++R+V+SW L+ Y + G EEA+++F K+ C P +
Sbjct: 346 MAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVC----PTHYSFANILKACADLAE 401
Query: 58 XXXXQWVHSYIDTRGDLVVGGN-----IGNALLNMYVKCGDMHMGLTIFDMLEHKDFISW 112
H ++ G G +GN+L++MYVKCG + G +F + +D +SW
Sbjct: 402 LHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSW 461
Query: 113 GTVICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAM-R 171
+I G A NG+G EA++LF ML G +PD +T IG+L C H G V EG +F +M R
Sbjct: 462 NAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTR 521
Query: 172 DSYLVPQMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
D + P HY CMVD+ GRAG EEA++ + M ++ + IWG+L
Sbjct: 522 DFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSL 567
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 3/208 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +RD +W ++V + + CEEA+ F M+ NE +
Sbjct: 112 MPERDQCTWNSMVSGFAQHDRCEEALCYFA-MMHKEGFVLNEYSFASVLSACSGLNDMNK 170
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
VHS I + + IG+AL++MY KCG+++ +FD + ++ +SW ++I
Sbjct: 171 GVQVHSLI-AKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFE 229
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFF-KAMRDSYLVPQM 179
NG EA+ +F +ML V+PD+VT ++ C+ + G + +++ L +
Sbjct: 230 QNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDI 289
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLV 207
VDMY + +EA +M +
Sbjct: 290 ILSNAFVDMYAKCSRIKEARFIFDSMPI 317
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 98/259 (37%), Gaps = 49/259 (18%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M R+V+SW +L+ + + G EA+ VF+ M++ R EP+E T
Sbjct: 213 MGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESR-VEPDEVTLASVISACASLSAIKV 271
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLE--------------- 105
Q VH + L + NA ++MY KC + IFD +
Sbjct: 272 GQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYA 331
Query: 106 ----------------HKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIG 149
++ +SW +I G NG +EA+ LF L+ + V P +F
Sbjct: 332 MAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFAN 391
Query: 150 LLCRC-----------SHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEA 198
+L C +H ++ G F D V ++DMY + G EE
Sbjct: 392 ILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVG-----NSLIDMYVKCGCVEEG 446
Query: 199 EAFLRAMLVEAEGPIWGAL 217
R M+ E + W A+
Sbjct: 447 YLVFRKMM-ERDCVSWNAM 464
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 63/157 (40%), Gaps = 31/157 (19%)
Query: 80 IGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGL-------------------- 119
I N L++ Y KCG + G +FD + ++ +W +V+ GL
Sbjct: 57 IQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERD 116
Query: 120 -----------AMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFK 168
A + +EA+ F++M +G ++ +F +L CS +++G
Sbjct: 117 QCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHS 176
Query: 169 AMRDSYLVPQMRHYGCMVDMYGRAGLFEEAEAFLRAM 205
+ S + + +VDMY + G +A+ M
Sbjct: 177 LIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEM 213
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 147 bits (370), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 117/219 (53%), Gaps = 5/219 (2%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREA-EPNEATXXXXXXXXXXXXXXX 59
M +RD +SW ++ Y + GH EA+ +F QM RE N ++
Sbjct: 369 MPKRDPVSWAAMIAGYSQSGHSFEALRLFVQME--REGGRLNRSSFSSALSTCADVVALE 426
Query: 60 XXQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGL 119
+ +H + +G G +GNALL MY KCG + +F + KD +SW T+I G
Sbjct: 427 LGKQLHGRL-VKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGY 485
Query: 120 AMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQ 178
+ +G G+ A++ F M +G++PDD T + +L CSH GLV +G +F M Y ++P
Sbjct: 486 SRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPN 545
Query: 179 MRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+HY CMVD+ GRAGL E+A ++ M E + IWG L
Sbjct: 546 SQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTL 584
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 83/207 (40%), Gaps = 20/207 (9%)
Query: 4 RDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQW 63
+DV +WT +V Y++ EEA +F +M E NE + +
Sbjct: 279 QDVFTWTAMVSGYIQNRMVEEARELFDKM-----PERNEVSWNAMLAGYVQGERMEMAKE 333
Query: 64 VHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNG 123
+ + R + N ++ Y +CG + +FD + +D +SW +I G + +G
Sbjct: 334 LFDVMPCR-----NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSG 388
Query: 124 HGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYG 183
H EA++LF M +G + + +F L C+ + G LV G
Sbjct: 389 HSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLH-----GRLVKGGYETG 443
Query: 184 CMVD-----MYGRAGLFEEAEAFLRAM 205
C V MY + G EEA + M
Sbjct: 444 CFVGNALLLMYCKCGSIEEANDLFKEM 470
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 146 bits (369), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 118/218 (54%), Gaps = 3/218 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ +RDV WT+L+ YV+ EEA+ ++++M PN+ T
Sbjct: 383 LQERDVALWTSLISGYVQNSDNEEALILYRRM-KTAGIIPNDPTMASVLKACSSLATLEL 441
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ VH + G + IG+AL MY KCG + G +F +KD +SW +I GL+
Sbjct: 442 GKQVHGHTIKHG-FGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLS 500
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQM 179
NG G EA++LF ML +G++PDDVTF+ ++ CSHKG V G +F M D L P++
Sbjct: 501 HNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKV 560
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HY CMVD+ RAG +EA+ F+ + ++ +W L
Sbjct: 561 DHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRIL 598
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 3/218 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMV-DCREAEPNEATXXXXXXXXXXXXXXX 59
M +R+ +W+T+V Y G EEA+ VF + + E ++
Sbjct: 179 MPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVG 238
Query: 60 XXQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGL 119
+ +H I + L+ + NAL+ MY KC ++ +FD ++ I+W ++ G
Sbjct: 239 LGRQIHC-ITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGY 297
Query: 120 AMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQM 179
+ NG EAV+LFS M G++P + T +G+L CS + EG + +
Sbjct: 298 SQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHL 357
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+VDMY +AG +A L E + +W +L
Sbjct: 358 FATTALVDMYAKAGCLADARKGFDC-LQERDVALWTSL 394
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 10/156 (6%)
Query: 4 RDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQW 63
R+ I+W+ +V Y + G EAV +F +M +P+E T +
Sbjct: 285 RNSITWSAMVTGYSQNGESLEAVKLFSRMFSAG-IKPSEYTIVGVLNACSDICYLEEGKQ 343
Query: 64 VHSYIDTRGDLVVGGN----IGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGL 119
+HS++ L +G AL++MY K G + FD L+ +D W ++I G
Sbjct: 344 LHSFL-----LKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGY 398
Query: 120 AMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCS 155
N +EA+ L+ M G+ P+D T +L CS
Sbjct: 399 VQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACS 434
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 68/150 (45%), Gaps = 9/150 (6%)
Query: 4 RDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAE--PNEATXXXXXXXXXXXXXXXXX 61
+DV+SW +L+ Y + G + V + + R + PN T
Sbjct: 78 KDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVG 137
Query: 62 QWVHSYI---DTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICG 118
+ H+ + + GD+ V +L+ MY K G + GL +F + ++ +W T++ G
Sbjct: 138 RQAHALVVKMSSFGDIYVD----TSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSG 193
Query: 119 LAMNGHGKEAVQLFSLMLVQGVQPDDVTFI 148
A G +EA+++F+L L + + D ++
Sbjct: 194 YATRGRVEEAIKVFNLFLREKEEGSDSDYV 223
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 15/126 (11%)
Query: 81 GNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNG---HGKEAVQLFSLMLV 137
N L+N Y KCG + +IF+ + KD +SW ++I G + NG +QLF M
Sbjct: 52 ANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRA 111
Query: 138 QGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYG------CMVDMYGR 191
Q + P+ T G+ + + T+ +A LV +M +G +V MY +
Sbjct: 112 QDILPNAYTLAGIF---KAESSLQSSTVGRQAHA---LVVKMSSFGDIYVDTSLVGMYCK 165
Query: 192 AGLFEE 197
AGL E+
Sbjct: 166 AGLVED 171
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 146 bits (368), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 125/220 (56%), Gaps = 6/220 (2%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M RD +SW+T+++ G E+ F+++ + PNE +
Sbjct: 229 MPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMS-PNEVSLTGVLSACSQSGSFEF 287
Query: 61 XQWVHSYIDTRG-DLVVGGNIGNALLNMYVKCGDMHMGLTIFD-MLEHKDFISWGTVICG 118
+ +H +++ G +V ++ NAL++MY +CG++ M +F+ M E + +SW ++I G
Sbjct: 288 GKILHGFVEKAGYSWIV--SVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAG 345
Query: 119 LAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV-P 177
LAM+G G+EAV+LF+ M GV PD ++FI LL CSH GL+ EG +F M+ Y + P
Sbjct: 346 LAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEP 405
Query: 178 QMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
++ HYGCMVD+YGR+G ++A F+ M + +W L
Sbjct: 406 EIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTL 445
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Query: 82 NALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQ 141
N +L Y+K G++ IF + H+D +SW T+I G+A NG E+ F + G+
Sbjct: 207 NVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMS 266
Query: 142 PDDVTFIGLLCRCSHKGLVSEGTM---FFKAMRDSYLVPQMRHYGCMVDMYGRAG 193
P++V+ G+L CS G G + F + S++V ++DMY R G
Sbjct: 267 PNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSV---NNALIDMYSRCG 318
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 145 bits (367), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 129/219 (58%), Gaps = 4/219 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M ++D+++W +++ + G EEA+A++ +M + + +P+ T
Sbjct: 182 MPEKDLVAWNSVINGFAENGKPEEALALYTEM-NSKGIKPDGFTIVSLLSACAKIGALTL 240
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ VH Y+ G L + N LL++Y +CG + T+FD + K+ +SW ++I GLA
Sbjct: 241 GKRVHVYMIKVG-LTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLA 299
Query: 121 MNGHGKEAVQLFSLM-LVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV-PQ 178
+NG GKEA++LF M +G+ P ++TF+G+L CSH G+V EG +F+ MR+ Y + P+
Sbjct: 300 VNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPR 359
Query: 179 MRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+ H+GCMVD+ RAG ++A ++++M ++ IW L
Sbjct: 360 IEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTL 398
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 100/215 (46%), Gaps = 6/215 (2%)
Query: 5 DVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWV 64
+V W TL+ Y G+ A +++++M EP+ T + +
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 65 HSYIDTRG--DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMN 122
HS + G L+ + N+LL++Y CGD+ +FD + KD ++W +VI G A N
Sbjct: 144 HSVVIRSGFGSLIY---VQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAEN 200
Query: 123 GHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHY 182
G +EA+ L++ M +G++PD T + LL C+ G ++ G M L +
Sbjct: 201 GKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSS 260
Query: 183 GCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
++D+Y R G EEA+ M V+ W +L
Sbjct: 261 NVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSL 294
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 145 bits (367), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 124/248 (50%), Gaps = 32/248 (12%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVD-------------------------C 35
M +RDVISW +L+ Y R G ++A +F M+D
Sbjct: 170 MYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFF 229
Query: 36 RE-----AEPNEATXXXXXXXXXXXXXXXXXQWVHSYIDTRGDLVVGGNIGNALLNMYVK 90
RE EP+E + +W+H Y + RG L G + NAL+ MY K
Sbjct: 230 REMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTG-VCNALIEMYSK 288
Query: 91 CGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGL 150
CG + + +F +E KD ISW T+I G A +G+ A++ F+ M V+P+ +TF+GL
Sbjct: 289 CGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGL 348
Query: 151 LCRCSHKGLVSEGTMFFKAMRDSYLV-PQMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEA 209
L CSH G+ EG +F MR Y + P++ HYGC++D+ RAG E A + M ++
Sbjct: 349 LSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKP 408
Query: 210 EGPIWGAL 217
+ IWG+L
Sbjct: 409 DSKIWGSL 416
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 96/232 (41%), Gaps = 38/232 (16%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+S +V + +++ AY + + ++KQ++ P+ T
Sbjct: 68 VSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYL 127
Query: 61 XQWVHSYIDTRGDL--VVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICG 118
+ VH ++ G VV NAL++MY+K D+ +FD + +D ISW +++ G
Sbjct: 128 GKQVHGHLCKFGPRFHVV---TENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSG 184
Query: 119 LAMNGHGKEAVQLFSLML-------------------------------VQGVQPDDVTF 147
A G K+A LF LML + G++PD+++
Sbjct: 185 YARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISL 244
Query: 148 IGLLCRCSHKGLVSEGT-MFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEA 198
I +L C+ G + G + A R +L Q +++MY + G+ +A
Sbjct: 245 ISVLPSCAQLGSLELGKWIHLYAERRGFL-KQTGVCNALIEMYSKCGVISQA 295
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 145 bits (366), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 129/219 (58%), Gaps = 4/219 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M ++D+++W +++ + G EEA+A++ +M + + +P+ T
Sbjct: 49 MPEKDLVAWNSVINGFAENGKPEEALALYTEM-NSKGIKPDGFTIVSLLSACAKIGALTL 107
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ VH Y+ G L + N LL++Y +CG + T+FD + K+ +SW ++I GLA
Sbjct: 108 GKRVHVYMIKVG-LTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLA 166
Query: 121 MNGHGKEAVQLFSLM-LVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV-PQ 178
+NG GKEA++LF M +G+ P ++TF+G+L CSH G+V EG +F+ MR+ Y + P+
Sbjct: 167 VNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPR 226
Query: 179 MRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+ H+GCMVD+ RAG ++A ++++M ++ IW L
Sbjct: 227 IEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTL 265
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 72/138 (52%), Gaps = 1/138 (0%)
Query: 80 IGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQG 139
+ N+LL++Y CGD+ +FD + KD ++W +VI G A NG +EA+ L++ M +G
Sbjct: 25 VQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKG 84
Query: 140 VQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAE 199
++PD T + LL C+ G ++ G M L + ++D+Y R G EEA+
Sbjct: 85 IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAK 144
Query: 200 AFLRAMLVEAEGPIWGAL 217
M V+ W +L
Sbjct: 145 TLFDEM-VDKNSVSWTSL 161
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 145 bits (365), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 114/216 (52%), Gaps = 12/216 (5%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREA----------EPNEATXXXXXX 50
M RD+++W T++ YV H E+A+ + +M + +PN T
Sbjct: 466 MEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILP 525
Query: 51 XXXXXXXXXXXQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFI 110
+ +H+Y + +L +G+AL++MY KCG + M +FD + K+ I
Sbjct: 526 SCAALSALAKGKEIHAYA-IKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVI 584
Query: 111 SWGTVICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAM 170
+W +I M+G+G+EA+ L +M+VQGV+P++VTFI + CSH G+V EG F M
Sbjct: 585 TWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVM 644
Query: 171 RDSYLV-PQMRHYGCMVDMYGRAGLFEEAEAFLRAM 205
+ Y V P HY C+VD+ GRAG +EA + M
Sbjct: 645 KPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMM 680
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 87/193 (45%), Gaps = 7/193 (3%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXX- 59
+S+R+ +SW +L+ + E A+ F+ M+D EP+ T
Sbjct: 159 ISERNQVSWNSLISSLCSFEKWEMALEAFRCMLD-ENVEPSSFTLVSVVTACSNLPMPEG 217
Query: 60 --XXQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVIC 117
+ VH+Y +G+L I N L+ MY K G + + +D ++W TV+
Sbjct: 218 LMMGKQVHAYGLRKGEL--NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLS 275
Query: 118 GLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGT-MFFKAMRDSYLV 176
L N EA++ M+++GV+PD+ T +L CSH ++ G + A+++ L
Sbjct: 276 SLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLD 335
Query: 177 PQMRHYGCMVDMY 189
+VDMY
Sbjct: 336 ENSFVGSALVDMY 348
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 82/196 (41%), Gaps = 2/196 (1%)
Query: 4 RDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQW 63
RD+++W T++ + + EA+ ++MV EP+E T +
Sbjct: 265 RDLVTWNTVLSSLCQNEQLLEALEYLREMV-LEGVEPDEFTISSVLPACSHLEMLRTGKE 323
Query: 64 VHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNG 123
+H+Y G L +G+AL++MY C + G +FD + + W +I G + N
Sbjct: 324 LHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNE 383
Query: 124 HGKEAVQLF-SLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHY 182
H KEA+ LF + G+ + T G++ C G S + L
Sbjct: 384 HDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQ 443
Query: 183 GCMVDMYGRAGLFEEA 198
++DMY R G + A
Sbjct: 444 NTLMDMYSRLGKIDIA 459
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 86/203 (42%), Gaps = 17/203 (8%)
Query: 9 WTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWVHSYI 68
W L+ + VR EAV + M+ +P+ + +H+++
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMI-VLGIKPDNYAFPALLKAVADLQDMELGKQIHAHV 123
Query: 69 DTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEA 128
G V + N L+N+Y KCGD +FD + ++ +SW ++I L + A
Sbjct: 124 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 183
Query: 129 VQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMR---------DSYLVPQM 179
++ F ML + V+P T + ++ CS+ + EG M K + +S+++
Sbjct: 184 LEAFRCMLDENVEPSSFTLVSVVTACSNLPM-PEGLMMGKQVHAYGLRKGELNSFII--- 239
Query: 180 RHYGCMVDMYGRAGLFEEAEAFL 202
+V MYG+ G ++ L
Sbjct: 240 ---NTLVAMYGKLGKLASSKVLL 259
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 89/207 (42%), Gaps = 12/207 (5%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M R + W ++ Y + H +EA+ +F M + N T
Sbjct: 364 MFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR 423
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H ++ RG L + N L++MY + G + + + IF +E +D ++W T+I G
Sbjct: 424 KEAIHGFVVKRG-LDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYV 482
Query: 121 MNGHGKEAVQLFSLM------LVQG-----VQPDDVTFIGLLCRCSHKGLVSEGTMFFKA 169
+ H ++A+ L M + +G ++P+ +T + +L C+ +++G
Sbjct: 483 FSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAY 542
Query: 170 MRDSYLVPQMRHYGCMVDMYGRAGLFE 196
+ L + +VDMY + G +
Sbjct: 543 AIKNNLATDVAVGSALVDMYAKCGCLQ 569
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 145 bits (365), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 121/218 (55%), Gaps = 3/218 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +RD+ISWT ++ +V+ G+ EEA+ F++M +P+
Sbjct: 166 MPERDLISWTAMINGFVKKGYQEEALLWFREM-QISGVKPDYVAIIAALNACTNLGALSF 224
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
WVH Y+ ++ D + N+L+++Y +CG + +F +E + +SW +VI G A
Sbjct: 225 GLWVHRYVLSQ-DFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFA 283
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV-PQM 179
NG+ E++ F M +G +PD VTF G L CSH GLV EG +F+ M+ Y + P++
Sbjct: 284 ANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRI 343
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HYGC+VD+Y RAG E+A +++M ++ + G+L
Sbjct: 344 EHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSL 381
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%)
Query: 82 NALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQ 141
N +++ Y++ G + +FD + +D ISW +I G G+ +EA+ F M + GV+
Sbjct: 144 NTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVK 203
Query: 142 PDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAEAF 201
PD V I L C++ G +S G + + +R ++D+Y R G E A
Sbjct: 204 PDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQV 263
Query: 202 LRAM 205
M
Sbjct: 264 FYNM 267
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 145 bits (365), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 127/219 (57%), Gaps = 3/219 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +RD++SW ++ Y + G +A+ +F++++ + +P+E T
Sbjct: 218 MCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALET 277
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+W+H ++ + + + + L++MY KCG + + +F+ KD ++W +I G A
Sbjct: 278 GRWIHVFVKS-SRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYA 336
Query: 121 MNGHGKEAVQLFSLML-VQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQ 178
M+G+ ++A++LF+ M + G+QP D+TFIG L C+H GLV+EG F++M Y + P+
Sbjct: 337 MHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPK 396
Query: 179 MRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+ HYGC+V + GRAG + A ++ M ++A+ +W ++
Sbjct: 397 IEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSV 435
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
Query: 81 GNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQG- 139
A++ Y K G++ +FD + +D +SW +I G A +G +A+ LF +L +G
Sbjct: 195 STAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGK 254
Query: 140 VQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEA 198
+PD++T + L CS G + G ++ S + ++ ++DMY + G EEA
Sbjct: 255 PKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEA 313
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 144 bits (364), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 113/216 (52%), Gaps = 3/216 (1%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
++ + SW ++ Y + G E+A+++F++M E PN T +
Sbjct: 382 EKSLPSWNAMISGYTQNGLTEDAISLFREMQKS-EFSPNPVTITCILSACAQLGALSLGK 440
Query: 63 WVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMN 122
WVH + + D + AL+ MY KCG + +FD++ K+ ++W T+I G ++
Sbjct: 441 WVHDLVRS-TDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLH 499
Query: 123 GHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQMRH 181
G G+EA+ +F ML G+ P VTF+ +L CSH GLV EG F +M Y P ++H
Sbjct: 500 GQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKH 559
Query: 182 YGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
Y CMVD+ GRAG + A F+ AM +E +W L
Sbjct: 560 YACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETL 595
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 83/208 (39%), Gaps = 5/208 (2%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
+ D++++ ++ Y G E ++++FK+++ A +T
Sbjct: 284 KPDIVAYNAMIHGYTSNGETELSLSLFKELM-LSGARLRSSTLVSLVPVSGHLMLIYA-- 340
Query: 63 WVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMN 122
+H Y + + + ++ AL +Y K ++ +FD K SW +I G N
Sbjct: 341 -IHGYC-LKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQN 398
Query: 123 GHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHY 182
G ++A+ LF M P+ VT +L C+ G +S G +R + +
Sbjct: 399 GLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVS 458
Query: 183 GCMVDMYGRAGLFEEAEAFLRAMLVEAE 210
++ MY + G EA M + E
Sbjct: 459 TALIGMYAKCGSIAEARRLFDLMTKKNE 486
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 68/164 (41%), Gaps = 9/164 (5%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M ++D I W T++ Y + E++ VF+ +++ + T
Sbjct: 180 MPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRL 239
Query: 61 XQWVHSYIDTRG----DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVI 116
+HS G D V+ G +++Y KCG + MG +F D +++ +I
Sbjct: 240 GMQIHSLATKTGCYSHDYVLTG-----FISLYSKCGKIKMGSALFREFRKPDIVAYNAMI 294
Query: 117 CGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLV 160
G NG + ++ LF +++ G + T + L+ H L+
Sbjct: 295 HGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI 338
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 144 bits (364), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 122/218 (55%), Gaps = 3/218 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M ++D I+WT ++ A+V G+ EEA+ F +M+ +E PN T
Sbjct: 398 MPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQ-KEVCPNSYTFSSVLSATASLADLIE 456
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+H + + ++V ++ N+L++MY KCG+ + IF + + +S+ T+I G +
Sbjct: 457 GLQIHGRV-VKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYS 515
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV-PQM 179
NG GK+A++LFS++ G +P+ VTF+ LL C H G V G +FK+M+ SY + P
Sbjct: 516 YNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGP 575
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HY CMVD+ GR+GL ++A + M + +WG+L
Sbjct: 576 DHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSL 613
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 96/212 (45%), Gaps = 9/212 (4%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M++R+VI+WT ++ Y + G E+ +F +M + + N T
Sbjct: 234 MTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYRE 293
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+H + +R L +GN+L++MY K G M +F ++++KD +SW ++I GL
Sbjct: 294 GSQIHGLV-SRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLV 352
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
EA +LF M + D V++ ++ S KG +S+ F M + +
Sbjct: 353 QRKQISEAYELFEKMPGK----DMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNIT--- 405
Query: 181 HYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGP 212
+ M+ + G +EEA + ML + P
Sbjct: 406 -WTAMISAFVSNGYYEEALCWFHKMLQKEVCP 436
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 144 bits (362), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 116/218 (53%), Gaps = 2/218 (0%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCRE-AEPNEATXXXXXXXXXXXXXXX 59
MS++D + + ++ Y + G ++A+ +F QM++ +P+E T
Sbjct: 289 MSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTS 348
Query: 60 XXQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGL 119
WV SYI G + + + +L+++Y+K GD +F L KD +S+ +I G
Sbjct: 349 FGTWVESYITEHG-IKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGC 407
Query: 120 AMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQM 179
+NG EA LF+ M+ + + P+ VTF GLL SH GLV EG F +M+D L P
Sbjct: 408 GINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSA 467
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HYG MVDM GRAG EEA +++M ++ +WGAL
Sbjct: 468 DHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGAL 505
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 77/190 (40%), Gaps = 38/190 (20%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+++++ +SW +L+ Y+ G +EA VF ++ + N
Sbjct: 165 IAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWN------------------- 205
Query: 61 XQWVHSYIDTRGDL-----------VVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDF 109
+ S +GD+ + N L+ YV C +M + T FD + K+
Sbjct: 206 --LIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNG 263
Query: 110 ISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKA 169
+SW T+I G G + A +LF LM + D + + ++ + G + F
Sbjct: 264 VSWITMISGYTKLGDVQSAEELFRLM----SKKDKLVYDAMIACYTQNGKPKDALKLFAQ 319
Query: 170 M--RDSYLVP 177
M R+SY+ P
Sbjct: 320 MLERNSYIQP 329
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 144 bits (362), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 119/216 (55%), Gaps = 5/216 (2%)
Query: 4 RDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREA-EPNEATXXXXXXXXXXXXXXXXXQ 62
R+V+ WTTL+ + + EA +F+QM+ RE+ PN+ T +
Sbjct: 275 RNVVMWTTLISGFAKCERAVEAFDLFRQML--RESILPNQCTLAAILVSCSSLGSLRHGK 332
Query: 63 WVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMN 122
VH Y+ G + N + ++MY +CG++ M T+FDM+ ++ ISW ++I +N
Sbjct: 333 SVHGYMIRNGIEMDAVNF-TSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGIN 391
Query: 123 GHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAM-RDSYLVPQMRH 181
G +EA+ F M Q V P+ VTF+ LL CSH G V EG F++M RD +VP+ H
Sbjct: 392 GLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEH 451
Query: 182 YGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
Y CMVD+ GRAG EA++F+ M V+ WGAL
Sbjct: 452 YACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGAL 487
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 54/123 (43%)
Query: 83 ALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQP 142
++++MYVKC + +F+ ++ + W T+I G A EA LF ML + + P
Sbjct: 251 SIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILP 310
Query: 143 DDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAEAFL 202
+ T +L CS G + G M + + ++ +DMY R G + A
Sbjct: 311 NQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVF 370
Query: 203 RAM 205
M
Sbjct: 371 DMM 373
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 143 bits (361), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 119/215 (55%), Gaps = 3/215 (1%)
Query: 4 RDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQW 63
+D + WT ++ VR +A+ +F++M NE T +W
Sbjct: 218 KDTVCWTAMIDGLVRNKEMNKALELFREM-QMENVSANEFTAVCVLSACSDLGALELGRW 276
Query: 64 VHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNG 123
VHS+++ + + + +GNAL+NMY +CGD++ +F ++ KD IS+ T+I GLAM+G
Sbjct: 277 VHSFVENQ-RMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHG 335
Query: 124 HGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV-PQMRHY 182
EA+ F M+ +G +P+ VT + LL CSH GL+ G F +M+ + V PQ+ HY
Sbjct: 336 ASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHY 395
Query: 183 GCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
GC+VD+ GR G EEA F+ + +E + + G L
Sbjct: 396 GCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTL 430
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 57/125 (45%)
Query: 81 GNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGV 140
++N Y +CG + L +F ++ KD + W +I GL N +A++LF M ++ V
Sbjct: 192 ATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENV 251
Query: 141 QPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAEA 200
++ T + +L CS G + G + + + +++MY R G EA
Sbjct: 252 SANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARR 311
Query: 201 FLRAM 205
R M
Sbjct: 312 VFRVM 316
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 143 bits (360), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 78/221 (35%), Positives = 116/221 (52%), Gaps = 4/221 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M R V+SWTT++ Y R +EA+ +F +MV C +PNE T
Sbjct: 215 MPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKM 274
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEH--KDFISWGTVICG 118
VH+Y+ RG + + N+L++ Y KCG + F + + K+ +SW T+I
Sbjct: 275 CGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISA 334
Query: 119 LAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTM-FFKAMRDSY-LV 176
A++G GKEAV +F M G++P+ VT I +L CSH GL E + FF M + Y +
Sbjct: 335 FAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKIT 394
Query: 177 PQMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
P ++HYGC+VDM R G EEAE + +E + +W L
Sbjct: 395 PDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRML 435
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 118/217 (54%), Gaps = 2/217 (0%)
Query: 2 SQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXX 61
S ++VI+W ++ YVR EEA+ K M+ + +PN+ +
Sbjct: 125 SDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHA 184
Query: 62 QWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAM 121
+WVHS + G + + + +AL+++Y KCGD+ +F ++ D W +I G A
Sbjct: 185 KWVHSLMIDSG-IELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFAT 243
Query: 122 NGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV-PQMR 180
+G EA+++FS M + V PD +TF+GLL CSH GL+ EG +F M + + P++
Sbjct: 244 HGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLE 303
Query: 181 HYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HYG MVD+ GRAG +EA + +M +E + IW +L
Sbjct: 304 HYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSL 340
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 120/218 (55%), Gaps = 3/218 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +D+ISWTT++ Y + EA+AVF +M++ P+E T
Sbjct: 992 MPVKDIISWTTMIKGYSQNKRYREAIAVFYKMME-EGIIPDEVTMSTVISACAHLGVLEI 1050
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ VH Y G V+ IG+AL++MY KCG + L +F L K+ W ++I GLA
Sbjct: 1051 GKEVHMYTLQNG-FVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLA 1109
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQM 179
+G +EA+++F+ M ++ V+P+ VTF+ + C+H GLV EG +++M D Y +V +
Sbjct: 1110 AHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNV 1169
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HYG MV ++ +AGL EA + M E IWGAL
Sbjct: 1170 EHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGAL 1207
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 41/198 (20%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +RD I+WTT+V AY R + A ++ QM +E NEAT
Sbjct: 930 MPERDDIAWTTMVSAYRRVLDMDSANSLANQM-----SEKNEAT---------------- 968
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
N L+N Y+ G++ ++F+ + KD ISW T+I G +
Sbjct: 969 --------------------SNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYS 1008
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
N +EA+ +F M+ +G+ PD+VT ++ C+H G++ G + V +
Sbjct: 1009 QNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVY 1068
Query: 181 HYGCMVDMYGRAGLFEEA 198
+VDMY + G E A
Sbjct: 1069 IGSALVDMYSKCGSLERA 1086
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 121/219 (55%), Gaps = 3/219 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
MS+R ++SW +++ + + G EA+ +F +M+D + +P+EAT
Sbjct: 194 MSERSIVSWNSMISSLSKCGRDREALELFCEMID-QGFDPDEATVVTVLPISASLGVLDT 252
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+W+HS ++ G +GNAL++ Y K GD+ IF ++ ++ +SW T+I G A
Sbjct: 253 GKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSA 312
Query: 121 MNGHGKEAVQLFSLMLVQG-VQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQ 178
+NG G+ + LF M+ +G V P++ TF+G+L CS+ G V G F M + + L +
Sbjct: 313 VNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEAR 372
Query: 179 MRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HYG MVD+ R+G EA FL+ M V A +WG+L
Sbjct: 373 TEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSL 411
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Query: 82 NALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQ 141
N ++ + GD+ GL +F + + +SW ++I L+ G +EA++LF M+ QG
Sbjct: 172 NLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFD 231
Query: 142 PDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYG-CMVDMYGRAGLFEEAEA 200
PD+ T + +L + G++ G S L G +VD Y ++G E A A
Sbjct: 232 PDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATA 291
Query: 201 FLRAM 205
R M
Sbjct: 292 IFRKM 296
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 107/206 (51%), Gaps = 3/206 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M RD++SW +L+ Y + HC EA+ +F +MV +P+
Sbjct: 209 MPLRDLVSWNSLISGYAQMNHCREAIKLFDEMV-ALGLKPDNVAIVSTLSACAQSGDWQK 267
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H Y R L + + L++ Y KCG + + IF++ K +W +I GLA
Sbjct: 268 GKAIHDYT-KRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLA 326
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVP-QM 179
M+G+G+ V F M+ G++PD VTFI +L CSH GLV E F MR Y V +M
Sbjct: 327 MHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREM 386
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAM 205
+HYGCM D+ GRAGL EEA + M
Sbjct: 387 KHYGCMADLLGRAGLIEEAAEMIEQM 412
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 56/117 (47%)
Query: 82 NALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQ 141
N L++ VK ++ +FD + +D +SW ++I G A H +EA++LF M+ G++
Sbjct: 187 NVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLK 246
Query: 142 PDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEA 198
PD+V + L C+ G +G + L +VD Y + G + A
Sbjct: 247 PDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTA 303
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 126/225 (56%), Gaps = 13/225 (5%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREA--EPNEATXXXXXXXXXXXXXX 58
M ++ +++W +LV + + G +EA+ VF QM RE+ EP+ AT
Sbjct: 168 MPEKSIVAWNSLVSGFEQNGLADEAIQVFYQM---RESGFEPDSATFVSLLSACAQTGAV 224
Query: 59 XXXQWVHSYIDTRG-DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVIC 117
WVH YI + G DL V +G AL+N+Y +CGD+ +FD ++ + +W +I
Sbjct: 225 SLGSWVHQYIISEGLDLNV--KLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMIS 282
Query: 118 GLAMNGHGKEAVQLFSLMLVQ-GVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-L 175
+G+G++AV+LF+ M G P++VTF+ +L C+H GLV EG +K M SY L
Sbjct: 283 AYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRL 342
Query: 176 VPQMRHYGCMVDMYGRAGLFEEAEAFLRAMLV--EAEGP-IWGAL 217
+P + H+ CMVDM GRAG +EA F+ + +A P +W A+
Sbjct: 343 IPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAM 387
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 1/135 (0%)
Query: 83 ALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQP 142
AL+ Y KCGDM +FD + K ++W +++ G NG EA+Q+F M G +P
Sbjct: 147 ALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEP 206
Query: 143 DDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAEAFL 202
D TF+ LL C+ G VS G+ + + L ++ ++++Y R G +A
Sbjct: 207 DSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVF 266
Query: 203 RAMLVEAEGPIWGAL 217
M E W A+
Sbjct: 267 DKM-KETNVAAWTAM 280
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 123/220 (55%), Gaps = 5/220 (2%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
MS+RDV++W++++ YV+ G +A+ +F QM+ ++ NE T
Sbjct: 200 MSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNR 259
Query: 61 XQWVHSYI-DTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIF--DMLEHKDFISWGTVIC 117
+ VH YI D L V + +L++MY KCG + ++F ++ D + W +I
Sbjct: 260 GKTVHRYILDVHLPLTV--ILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIG 317
Query: 118 GLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVP 177
GLA +G +E++QLF M + PD++TF+ LL CSH GLV E FFK++++S P
Sbjct: 318 GLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEP 377
Query: 178 QMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+ HY CMVD+ RAGL ++A F+ M ++ G + GAL
Sbjct: 378 KSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGAL 417
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 74/138 (53%), Gaps = 2/138 (1%)
Query: 82 NALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQG-V 140
N++L+ Y K GD+ +FD + +D ++W ++I G G +A+++F M+ G
Sbjct: 178 NSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSS 237
Query: 141 QPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEA-E 199
+ ++VT + ++C C+H G ++ G + + D +L + ++DMY + G +A
Sbjct: 238 KANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWS 297
Query: 200 AFLRAMLVEAEGPIWGAL 217
F RA + E + +W A+
Sbjct: 298 VFYRASVKETDALMWNAI 315
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 118/220 (53%), Gaps = 8/220 (3%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M ++I W ++ Y + G+ EA+ +F +M++ ++ P+ +
Sbjct: 283 MKSPNLILWNAMISGYAKNGYAREAIDMFHEMIN-KDVRPDTISITSAISACAQVGSLEQ 341
Query: 61 XQWVHSYI---DTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVIC 117
+ ++ Y+ D R D+ I +AL++M+ KCG + +FD +D + W +I
Sbjct: 342 ARSMYEYVGRSDYRDDVF----ISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIV 397
Query: 118 GLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVP 177
G ++G +EA+ L+ M GV P+DVTF+GLL C+H G+V EG FF M D + P
Sbjct: 398 GYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINP 457
Query: 178 QMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
Q +HY C++D+ GRAG ++A ++ M V+ +WGAL
Sbjct: 458 QQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGAL 497
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 100/217 (46%), Gaps = 3/217 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ +R ++SWT +V AY + G EA+ +F QM + +P+
Sbjct: 182 LPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKM-DVKPDWVALVSVLNAFTCLQDLKQ 240
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H+ + G L + ++ +L MY KCG + +FD ++ + I W +I G A
Sbjct: 241 GRSIHASVVKMG-LEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYA 299
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
NG+ +EA+ +F M+ + V+PD ++ + C+ G + + ++ + S +
Sbjct: 300 KNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVF 359
Query: 181 HYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
++DM+ + G E A L + + +W A+
Sbjct: 360 ISSALIDMFAKCGSVEGARLVFDRTL-DRDVVVWSAM 395
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 68/156 (43%), Gaps = 10/156 (6%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ + + W ++ Y R H ++A+ ++ M R P+ T
Sbjct: 79 LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLAR-VSPDSFTFPHLLKACSGLSHLQM 137
Query: 61 XQWVHSYIDTRG---DLVVGGNIGNALLNMYVKCGDMHMGLTIFD--MLEHKDFISWGTV 115
++VH+ + G D+ V N L+ +Y KC + T+F+ L + +SW +
Sbjct: 138 GRFVHAQVFRLGFDADVFVQ----NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAI 193
Query: 116 ICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLL 151
+ A NG EA+++FS M V+PD V + +L
Sbjct: 194 VSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVL 229
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 119/218 (54%), Gaps = 3/218 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +R+V+SWT ++ + + + + ++ +M ++PN+ T
Sbjct: 181 MPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKS-TSDPNDYTFTALLSACTGSGALGQ 239
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ VH G L +I N+L++MY KCGD+ IFD +KD +SW ++I G A
Sbjct: 240 GRSVHCQTLHMG-LKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYA 298
Query: 121 MNGHGKEAVQLFSLMLVQ-GVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQM 179
+G +A++LF LM+ + G +PD +T++G+L C H GLV EG FF M + L P++
Sbjct: 299 QHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPEL 358
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HY C+VD+ GR GL +EA + M ++ IWG+L
Sbjct: 359 NHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSL 396
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 57/128 (44%)
Query: 71 RGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQ 130
+G + +G++L+ +Y G++ +F+ + ++ +SW +I G A ++
Sbjct: 148 KGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLK 207
Query: 131 LFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYG 190
L+S M P+D TF LL C+ G + +G L + ++ MY
Sbjct: 208 LYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYC 267
Query: 191 RAGLFEEA 198
+ G ++A
Sbjct: 268 KCGDLKDA 275
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 115/218 (52%), Gaps = 2/218 (0%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M+ R +SWT ++ Y G +EA+A+F M+ E +P+ T
Sbjct: 317 MTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGE-KPDLVTLLSLISGCGKFGSLET 375
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+W+ + D G I NAL++MY KCG +H IFD K ++W T+I G A
Sbjct: 376 GKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYA 435
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQM 179
+NG EA++LFS M+ +P+ +TF+ +L C+H G + +G +F M+ Y + P +
Sbjct: 436 LNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGL 495
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HY CMVD+ GR G EEA +R M + + IWGAL
Sbjct: 496 DHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGAL 533
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 79/167 (47%), Gaps = 4/167 (2%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +RD +W ++ + + GH ++A ++F++M E P+ T
Sbjct: 113 MPERDATTWNAMLSGFCQSGHTDKAFSLFREM-RLNEITPDSVTVMTLIQSASFEKSLKL 171
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKD--FISWGTVICG 118
+ +H+ + R + V + N ++ Y KCGD+ +F+ ++ D +SW ++
Sbjct: 172 LEAMHA-VGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKA 230
Query: 119 LAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTM 165
++ G +A L+ LML + +PD TFI L C + +++G +
Sbjct: 231 YSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRL 277
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 87/201 (43%), Gaps = 11/201 (5%)
Query: 4 RDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQW 63
R V+SW ++ AY G +A ++ M+ E +P+ +T +
Sbjct: 219 RTVVSWNSMFKAYSVFGEAFDAFGLYCLMLR-EEFKPDLSTFINLAASCQNPETLTQGRL 277
Query: 64 VHSY---IDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+HS+ + T D+ N ++MY K D +FD++ + +SW +I G A
Sbjct: 278 IHSHAIHLGTDQDI----EAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYA 333
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
G EA+ LF M+ G +PD VT + L+ C G + G + A D Y +
Sbjct: 334 EKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGK-WIDARADIYGCKRDN 392
Query: 181 HYGC--MVDMYGRAGLFEEAE 199
C ++DMY + G EA
Sbjct: 393 VMICNALIDMYSKCGSIHEAR 413
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 2/127 (1%)
Query: 80 IGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQG 139
+G A ++M+VKC + +F+ + +D +W ++ G +GH +A LF M +
Sbjct: 89 VGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNE 148
Query: 140 VQPDDVTFIGLLCRCS-HKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEA 198
+ PD VT + L+ S K L M +R V Q+ + YG+ G + A
Sbjct: 149 ITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDV-QVTVANTWISTYGKCGDLDSA 207
Query: 199 EAFLRAM 205
+ A+
Sbjct: 208 KLVFEAI 214
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 141 bits (356), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 116/217 (53%), Gaps = 2/217 (0%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +R+++SW T++ Y + +E + +F++M +P++ T
Sbjct: 233 MPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSL 292
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+W H ++ R L + A+L+MY KCG++ IFD + K SW +I G A
Sbjct: 293 GEWCHCFVQ-RKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYA 351
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
+NG+ + A+ LF M+++ +PD++T + ++ C+H GLV EG +F MR+ L ++
Sbjct: 352 LNGNARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIE 410
Query: 181 HYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HYGCMVD+ GRAG +EAE + M E G I +
Sbjct: 411 HYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSF 447
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 89/219 (40%), Gaps = 13/219 (5%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEP-NEATXXXXXXXXXXXXXXX 59
M R +SWT L+ Y+R G + A +F QM ++ N
Sbjct: 139 MPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRL 198
Query: 60 XXQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGL 119
+ H + T ++ G Y D+ +FD + ++ +SW T+I G
Sbjct: 199 FDEMTHKTVITWTTMIHG----------YCNIKDIDAARKLFDAMPERNLVSWNTMIGGY 248
Query: 120 AMNGHGKEAVQLFSLM-LVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQ 178
N +E ++LF M + PDDVT + +L S G +S G ++ L +
Sbjct: 249 CQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKK 308
Query: 179 MRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
++ ++DMY + G E+A+ M E + W A+
Sbjct: 309 VKVCTAILDMYSKCGEIEKAKRIFDEM-PEKQVASWNAM 346
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 140 bits (354), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 118/217 (54%), Gaps = 4/217 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ +++VISWT+++ C EA+ +QM +PN T
Sbjct: 459 IPRKNVISWTSIIAGLRLNNRCFEALIFLRQMK--MTLQPNAITLTAALAACARIGALMC 516
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H+++ R + + + NALL+MYV+CG M+ + F+ + KD SW ++ G +
Sbjct: 517 GKEIHAHV-LRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYS 574
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
G G V+LF M+ V+PD++TFI LLC CS +V +G M+F M D + P ++
Sbjct: 575 ERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLK 634
Query: 181 HYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HY C+VD+ GRAG +EA F++ M V + +WGAL
Sbjct: 635 HYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGAL 671
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 2/198 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +RD+ISW ++ Y G C E + +F M +P+ T
Sbjct: 257 MPRRDIISWNAMISGYFENGMCHEGLELFFAMRGL-SVDPDLMTLTSVISACELLGDRRL 315
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H+Y+ T G V ++ N+L MY+ G +F +E KD +SW T+I G
Sbjct: 316 GRDIHAYVITTG-FAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYE 374
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
N +A+ + +M V+PD++T +L C+ G + G K + L+ +
Sbjct: 375 YNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVI 434
Query: 181 HYGCMVDMYGRAGLFEEA 198
+++MY + ++A
Sbjct: 435 VANNLINMYSKCKCIDKA 452
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 91/205 (44%), Gaps = 1/205 (0%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
MS+R++ SW LV Y + G+ +EA+ ++ +M+ +P+ T
Sbjct: 155 MSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLAR 214
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ VH ++ R + ++ NAL+ MYVKCGD+ +FD + +D ISW +I G
Sbjct: 215 GKEVHVHV-VRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYF 273
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
NG E ++LF M V PD +T ++ C G G + + +
Sbjct: 274 ENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDIS 333
Query: 181 HYGCMVDMYGRAGLFEEAEAFLRAM 205
+ MY AG + EAE M
Sbjct: 334 VCNSLTQMYLNAGSWREAEKLFSRM 358
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 69/143 (48%), Gaps = 3/143 (2%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M ++D++SWTT++ Y ++A+ ++ M+D +P+E T
Sbjct: 358 MERKDIVSWTTMISGYEYNFLPDKAIDTYR-MMDQDSVKPDEITVAAVLSACATLGDLDT 416
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+H + + L+ + N L+NMY KC + L IF + K+ ISW ++I GL
Sbjct: 417 GVELHK-LAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLR 475
Query: 121 MNGHGKEAVQLFSLMLVQGVQPD 143
+N EA+ +F + +QP+
Sbjct: 476 LNNRCFEAL-IFLRQMKMTLQPN 497
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 76 VGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLM 135
+G +GNA L M+V+ G++ +F + ++ SW ++ G A G+ EA+ L+ M
Sbjct: 127 LGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRM 186
Query: 136 L-VQGVQPDDVTFIGLLCRC 154
L V GV+PD TF +L C
Sbjct: 187 LWVGGVKPDVYTFPCVLRTC 206
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 140 bits (354), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 122/222 (54%), Gaps = 7/222 (3%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +R ++SW +++ A VR G + A+ +F++M R EP+ T
Sbjct: 212 MPERSLVSWNSMIDALVRFGEYDSALQLFREMQ--RSFEPDGYTMQSVLSACAGLGSLSL 269
Query: 61 XQWVHSYIDTRGDLVVGGNI--GNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICG 118
W H+++ + D+ V ++ N+L+ MY KCG + M +F ++ +D SW +I G
Sbjct: 270 GTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILG 329
Query: 119 LAMNGHGKEAVQLFSLML--VQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAM-RDSYL 175
A +G +EA+ F M+ + V+P+ VTF+GLL C+H+G V++G +F M RD +
Sbjct: 330 FATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCI 389
Query: 176 VPQMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
P + HYGC+VD+ RAG EA + +M ++ + IW +L
Sbjct: 390 EPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSL 431
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 10/203 (4%)
Query: 9 WTTLVMAYVRG-GHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWVHSY 67
W TL+ A EEA ++++M++ E+ P++ T + VH
Sbjct: 117 WNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQ 176
Query: 68 IDTRGDLVVGGNI--GNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHG 125
I G GG++ N L+++Y CG + + +FD + + +SW ++I L G
Sbjct: 177 IVKHG---FGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEY 233
Query: 126 KEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGT---MFFKAMRDSYLVPQMRHY 182
A+QLF M + +PD T +L C+ G +S GT F D + +
Sbjct: 234 DSALQLFREMQ-RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVK 292
Query: 183 GCMVDMYGRAGLFEEAEAFLRAM 205
+++MY + G AE + M
Sbjct: 293 NSLIEMYCKCGSLRMAEQVFQGM 315
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 140 bits (354), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 120/219 (54%), Gaps = 3/219 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ ++D +SW +++ V +EA+ +F M +P+
Sbjct: 265 LEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDH 324
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+WVH YI T G + +IG A+++MY KCG + L IF+ + K+ +W ++ GLA
Sbjct: 325 GRWVHEYILTAG-IKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLA 383
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAM--RDSYLVPQ 178
++GHG E+++ F M+ G +P+ VTF+ L C H GLV EG +F M R+ L P+
Sbjct: 384 IHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPK 443
Query: 179 MRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+ HYGCM+D+ RAGL +EA ++AM V+ + I GA+
Sbjct: 444 LEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAI 482
Score = 100 bits (248), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 94/199 (47%), Gaps = 6/199 (3%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M RDV+SWT ++ + R G +EA+ F +M + EPN AT
Sbjct: 167 MPVRDVVSWTGIITGFTRTGLYKEALDTFSKM----DVEPNLATYVCVLVSSGRVGCLSL 222
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H I R L+ GNAL++MYVKC + + +F LE KD +SW ++I GL
Sbjct: 223 GKGIHGLILKRASLI-SLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLV 281
Query: 121 MNGHGKEAVQLFSLMLV-QGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQM 179
KEA+ LFSLM G++PD +L C+ G V G + + + +
Sbjct: 282 HCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDT 341
Query: 180 RHYGCMVDMYGRAGLFEEA 198
+VDMY + G E A
Sbjct: 342 HIGTAIVDMYAKCGYIETA 360
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 117/216 (54%), Gaps = 4/216 (1%)
Query: 4 RDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQW 63
+++ SWT L+ +V+ G EA +VF +M R + +
Sbjct: 200 KNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQ 259
Query: 64 VHSYIDTRG-DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMN 122
VH + G D V I NAL++MY KC D+ IF + H+D +SW ++I G+A +
Sbjct: 260 VHGLVIALGFDSCVF--ISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQH 317
Query: 123 GHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQMRH 181
G ++A+ L+ M+ GV+P++VTF+GL+ CSH G V +G F++M Y + P ++H
Sbjct: 318 GQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQH 377
Query: 182 YGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
Y C++D+ GR+GL +EAE + M + P W AL
Sbjct: 378 YTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAAL 413
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 1/130 (0%)
Query: 80 IGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAM-NGHGKEAVQLFSLMLVQ 138
+ N L+N+Y KCG L +FD + H+D I+W +V+ L N GK S+
Sbjct: 40 LANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSS 99
Query: 139 GVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEA 198
G++PDD F L+ C++ G + G S +VDMY + GL A
Sbjct: 100 GLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSA 159
Query: 199 EAFLRAMLVE 208
+A ++ V+
Sbjct: 160 KAVFDSIRVK 169
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 40/61 (65%)
Query: 80 IGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQG 139
+ ++L++MY KCG ++ +FD + K+ ISW ++ G A +G +EA++LF ++ V+
Sbjct: 142 VKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKN 201
Query: 140 V 140
+
Sbjct: 202 L 202
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 94/141 (66%), Gaps = 3/141 (2%)
Query: 80 IGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQG 139
+ NA L+M++KCG+ +F+ ++ ++ +SW T+I G AMNG +EA+ LF+ M +G
Sbjct: 247 VENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEG 306
Query: 140 VQPDDVTFIGLLCRCSHKGLVSEGTMFFKAM---RDSYLVPQMRHYGCMVDMYGRAGLFE 196
++P+ VTF+G+L CSH GLV+EG +F M D L P+ HY CMVD+ GR+GL E
Sbjct: 307 LRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLE 366
Query: 197 EAEAFLRAMLVEAEGPIWGAL 217
EA F++ M VE + IWGAL
Sbjct: 367 EAYEFIKKMPVEPDTGIWGAL 387
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 82/205 (40%), Gaps = 2/205 (0%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M + + W TL YVR E++ ++K+M D P+E T
Sbjct: 69 MHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDL-GVRPDEFTYPFVVKAISQLGDFSC 127
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+H+++ G G + L+ MY+K G++ +F+ ++ KD ++W +
Sbjct: 128 GFALHAHVVKYG-FGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCV 186
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
G+ A++ F+ M VQ D T + +L C G + G + R + +
Sbjct: 187 QTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNII 246
Query: 181 HYGCMVDMYGRAGLFEEAEAFLRAM 205
+DM+ + G E A M
Sbjct: 247 VENARLDMHLKCGNTEAARVLFEEM 271
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 139 bits (350), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 117/218 (53%), Gaps = 5/218 (2%)
Query: 4 RDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQW 63
+D+ SW ++ Y + + A+ +F++M+ + +P+ T +
Sbjct: 400 KDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKR 459
Query: 64 VHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEH---KDFISWGTVICGLA 120
H Y++ + N+ A+++MY KCG + L IF ++ W +ICG A
Sbjct: 460 AHDYLNF-STIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSA 518
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQM 179
+GH K A+ L+S + ++P+ +TF+G+L C H GLV G +F++M+ + + P +
Sbjct: 519 THGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDI 578
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+HYGCMVD+ G+AG EEA+ ++ M V+A+ IWG L
Sbjct: 579 KHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGML 616
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 90/229 (39%), Gaps = 32/229 (13%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
++++D++SW T++ +R +EA+ + +M+ C +P+E
Sbjct: 265 ITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRC-GMKPSEVMMVDLLSASARSVGSSK 323
Query: 61 XQWVHSYIDTRG----------------------------DLVVGGNIG--NALLNMYVK 90
+H I RG + V +I NAL+ +VK
Sbjct: 324 GLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVK 383
Query: 91 CGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQG-VQPDDVTFIG 149
G + +FD KD SW +I G A + + A+ LF M+ V+PD +T +
Sbjct: 384 NGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVS 443
Query: 150 LLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEA 198
+ S G + EG + S + P ++DMY + G E A
Sbjct: 444 VFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETA 492
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 77/199 (38%), Gaps = 34/199 (17%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVD--CREAEPNEATXXXXXXXXXXXXXX 58
M +R +S+TTL+ Y + EA+ +F++M + E AT
Sbjct: 133 MPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDC 192
Query: 59 XXXQWVHSYIDTRGDLVVGGNI---------------------------GNALLNMYVKC 91
Q + + G + V N+ N +LN Y K
Sbjct: 193 RMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKA 252
Query: 92 GDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLL 151
G + +FD + KD +SWGT+I G EA+ ++ ML G++P +V + LL
Sbjct: 253 GLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLL 312
Query: 152 CRC-----SHKGLVSEGTM 165
S KGL GT+
Sbjct: 313 SASARSVGSSKGLQLHGTI 331
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 40/171 (23%)
Query: 82 NALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQ 141
N +++ YV+ + L +FD++ + +S+ T+I G A N EA++LF M G+
Sbjct: 111 NIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIM 170
Query: 142 PDDVTFIGLLCRCSHKG--------------LVSEGTMF--------------------- 166
++VT ++ CSH G L EG +F
Sbjct: 171 LNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKL 230
Query: 167 FKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
F M + LV + M++ Y +AGL E+AE + E + WG +
Sbjct: 231 FDEMPERNLVT----WNVMLNGYSKAGLIEQAEELFD-QITEKDIVSWGTM 276
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 139 bits (349), Expect = 2e-33, Method: Composition-based stats.
Identities = 72/218 (33%), Positives = 117/218 (53%), Gaps = 3/218 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +++V+SWTTL+ + + G E A++ + +M++ + +PNE T
Sbjct: 253 MPEKNVVSWTTLINGFSQTGDYETAISTYFEMLE-KGLKPNEYTIAAVLSACSKSGALGS 311
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+H YI G + + IG AL++MY KCG++ T+F + HKD +SW +I G A
Sbjct: 312 GIRIHGYILDNG-IKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWA 370
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV-PQM 179
++G +A+Q F M+ G +PD+V F+ +L C + V G FF +MR Y + P +
Sbjct: 371 VHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTL 430
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+HY +VD+ GRAG EA + M + + W AL
Sbjct: 431 KHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAAL 468
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 139 bits (349), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 116/218 (53%), Gaps = 3/218 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M ++D+++W+T++ Y +E + +F QM+ +P++ +
Sbjct: 273 MVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQ-ENLKPDQFSIVGFLSSCASLGALDL 331
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+W S ID R + + + NAL++MY KCG M G +F ++ KD + I GLA
Sbjct: 332 GEWGISLID-RHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLA 390
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQ-M 179
NGH K + +F G+ PD TF+GLLC C H GL+ +G FF A+ Y + + +
Sbjct: 391 KNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTV 450
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HYGCMVD++GRAG+ ++A + M + +WGAL
Sbjct: 451 EHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGAL 488
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 89/193 (46%), Gaps = 2/193 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ R V++WT L Y G EA+ +FK+MV+ +P+
Sbjct: 172 IPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEM-GVKPDSYFIVQVLSACVHVGDLDS 230
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+W+ Y++ ++ + L+N+Y KCG M ++FD + KD ++W T+I G A
Sbjct: 231 GEWIVKYMEEM-EMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYA 289
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
N KE ++LF ML + ++PD + +G L C+ G + G + + +
Sbjct: 290 SNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLF 349
Query: 181 HYGCMVDMYGRAG 193
++DMY + G
Sbjct: 350 MANALIDMYAKCG 362
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 64/136 (47%), Gaps = 1/136 (0%)
Query: 82 NALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQ 141
+LL++Y G ++ +FD + + ++W + G +G +EA+ LF M+ GV+
Sbjct: 150 TSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVK 209
Query: 142 PDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAEAF 201
PD + +L C H G + G K M + + +V++Y + G E+A +
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSV 269
Query: 202 LRAMLVEAEGPIWGAL 217
+M VE + W +
Sbjct: 270 FDSM-VEKDIVTWSTM 284
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 139 bits (349), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 117/218 (53%), Gaps = 4/218 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREA-EPNEATXXXXXXXXXXXXXXX 59
+ R+ +SW L+ + R E+A+ +F+ M+ R+ P+ +
Sbjct: 222 LESRNDVSWNALIAGHARRSGTEKALELFQGML--RDGFRPSHFSYASLFGACSSTGFLE 279
Query: 60 XXQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGL 119
+WVH+Y+ G+ +V GN LL+MY K G +H IFD L +D +SW +++
Sbjct: 280 QGKWVHAYMIKSGEKLVAF-AGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAY 338
Query: 120 AMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQM 179
A +G GKEAV F M G++P++++F+ +L CSH GL+ EG +++ M+ +VP+
Sbjct: 339 AQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEA 398
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HY +VD+ GRAG A F+ M +E IW AL
Sbjct: 399 WHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKAL 436
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 89/202 (44%), Gaps = 2/202 (0%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M QRD ++WTTL+ Y + +A+ F QM+ + PNE T
Sbjct: 121 MPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYS-PNEFTLSSVIKAAAAERRGCC 179
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+H + G ++G+ALL++Y + G M +FD LE ++ +SW +I G A
Sbjct: 180 GHQLHGFCVKCG-FDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 238
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
++A++LF ML G +P ++ L CS G + +G M S
Sbjct: 239 RRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF 298
Query: 181 HYGCMVDMYGRAGLFEEAEAFL 202
++DMY ++G +A
Sbjct: 299 AGNTLLDMYAKSGSIHDARKIF 320
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 80/163 (49%), Gaps = 20/163 (12%)
Query: 64 VHSYIDT---RGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
VH++I R D+V +GN LLNMY KCG + +F+ + +DF++W T+I G +
Sbjct: 82 VHAHILQSIFRHDIV----MGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYS 137
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLL--CRCSHKGLVSEGTMFF--KAMRDSYLV 176
+ +A+ F+ ML G P++ T ++ +G F K DS +
Sbjct: 138 QHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNV- 196
Query: 177 PQMRHYG-CMVDMYGRAGLFEEAEAFLRAMLVEAEGPI-WGAL 217
H G ++D+Y R GL ++A+ A+ E+ + W AL
Sbjct: 197 ----HVGSALLDLYTRYGLMDDAQLVFDAL--ESRNDVSWNAL 233
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 138 bits (347), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 120/224 (53%), Gaps = 9/224 (4%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +R+ ++WT +V Y+ G E + + +MV N T
Sbjct: 203 MPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVV 262
Query: 61 XQWVHSYIDTRGDLVVGGN-------IGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWG 113
+WVH Y + ++++G +G AL++MY KCG++ + +F ++ ++ ++W
Sbjct: 263 GRWVHVYA-LKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWN 321
Query: 114 TVICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDS 173
+ GLAM+G G+ + +F M ++ V+PDD+TF +L CSH G+V EG F ++R
Sbjct: 322 ALFSGLAMHGKGRMVIDMFPQM-IREVKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFY 380
Query: 174 YLVPQMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
L P++ HY CMVD+ GRAGL EEAE +R M V + G+L
Sbjct: 381 GLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSL 424
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 138 bits (347), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 112/215 (52%), Gaps = 3/215 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
MS ++++W +++ Y R E ++ +F M+ + P+ +
Sbjct: 537 MSTENMVAWNSMISCYSRNNLPELSIDLFNLMLS-QGIFPDSVSITSVLVAISSTASLLK 595
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H Y R + ++ NAL++MYVKCG IF ++HK I+W +I G
Sbjct: 596 GKSLHGYT-LRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYG 654
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQM 179
+G A+ LF M G PDDVTF+ L+ C+H G V EG F+ M+ Y + P M
Sbjct: 655 SHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNM 714
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIW 214
HY MVD+ GRAGL EEA +F++AM +EA+ IW
Sbjct: 715 EHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIW 749
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 101/210 (48%), Gaps = 10/210 (4%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREA-EPNEATXXXXXXXXXXXXXXX 59
M ++D+++W +L+ + G +EA+ VF M D ++ +P+
Sbjct: 434 MEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALR 493
Query: 60 XXQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGL 119
VH + G LV+ +G++L+++Y KCG M L +F + ++ ++W ++I
Sbjct: 494 FGLQVHGSMIKTG-LVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCY 552
Query: 120 AMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYL---V 176
+ N + ++ LF+LML QG+ PD V+ +L S + +G K++ L +
Sbjct: 553 SRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKG----KSLHGYTLRLGI 608
Query: 177 PQMRHY-GCMVDMYGRAGLFEEAEAFLRAM 205
P H ++DMY + G + AE + M
Sbjct: 609 PSDTHLKNALIDMYVKCGFSKYAENIFKKM 638
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 85/202 (42%), Gaps = 4/202 (1%)
Query: 9 WTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWVHSYI 68
W +V AY + A+ +F M + P+ T + VH+ +
Sbjct: 341 WNAMVAAYAENDYGYSALDLFGFMRQ-KSVLPDSFTLSNVISCCSVLGLYNYGKSVHAEL 399
Query: 69 DTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEA 128
R + I +ALL +Y KCG +F +E KD ++WG++I GL NG KEA
Sbjct: 400 FKR-PIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEA 458
Query: 129 VQLFSLML--VQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMV 186
+++F M ++PD + C+ + G +M + LV + ++
Sbjct: 459 LKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLI 518
Query: 187 DMYGRAGLFEEAEAFLRAMLVE 208
D+Y + GL E A +M E
Sbjct: 519 DLYSKCGLPEMALKVFTSMSTE 540
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 1/135 (0%)
Query: 83 ALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQP 142
+LL+MY KCG + T+F + K W ++ A N +G A+ LF M + V P
Sbjct: 312 SLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLP 371
Query: 143 DDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAEAFL 202
D T ++ CS GL + G + + ++ +Y + G +A
Sbjct: 372 DSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVF 431
Query: 203 RAMLVEAEGPIWGAL 217
++M E + WG+L
Sbjct: 432 KSM-EEKDMVAWGSL 445
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 137 bits (345), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 119/219 (54%), Gaps = 5/219 (2%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCRE-AEPNEATXXXXXXXXXXXXXXX 59
M R++ +W+ ++ Y + E+A+ +F+ M RE NE
Sbjct: 209 MPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMK--REGVVANETVMVSVISSCAHLGALE 266
Query: 60 XXQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGL 119
+ + Y+ + + V +G AL++M+ +CGD+ + +F+ L D +SW ++I GL
Sbjct: 267 FGERAYEYV-VKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGL 325
Query: 120 AMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAM-RDSYLVPQ 178
A++GH +A+ FS M+ G P DVTF +L CSH GLV +G ++ M +D + P+
Sbjct: 326 AVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPR 385
Query: 179 MRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+ HYGC+VDM GRAG EAE F+ M V+ PI GAL
Sbjct: 386 LEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGAL 424
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 1/130 (0%)
Query: 88 YVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTF 147
Y KCG + +FD + H++ +W +I G A N ++A+ LF M +GV ++
Sbjct: 193 YCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVM 252
Query: 148 IGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAEAFLRAMLV 207
+ ++ C+H G + G ++ + S++ + +VDM+ R G E+A L
Sbjct: 253 VSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEG-LP 311
Query: 208 EAEGPIWGAL 217
E + W ++
Sbjct: 312 ETDSLSWSSI 321
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 137 bits (345), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 116/218 (53%), Gaps = 3/218 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M ++ ++SW ++ Y++ EAV ++ +M + EP+ +
Sbjct: 269 MGKKSLVSWNVMIGVYMKNAMPVEAVELYSRM-EADGFEPDAVSITSVLPACGDTSALSL 327
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H YI+ R L+ + NAL++MY KCG + +F+ ++ +D +SW +I
Sbjct: 328 GKKIHGYIE-RKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYG 386
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQM 179
+G G +AV LFS + G+ PD + F+ L CSH GL+ EG FK M D Y + P++
Sbjct: 387 FSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRL 446
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
H CMVD+ GRAG +EA F++ M +E +WGAL
Sbjct: 447 EHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGAL 484
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 81/205 (39%), Gaps = 35/205 (17%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
MS+RDV+SW +LV+ Y + ++A+ V CRE E + +
Sbjct: 201 MSRRDVVSWNSLVVGYAQNQRFDDALEV------CREMESVKISHDAG------------ 242
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
T L+ + MYVK DM F + K +SW +I
Sbjct: 243 ---------TMASLLPAVSNTTTENVMYVK--DM------FFKMGKKSLVSWNVMIGVYM 285
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
N EAV+L+S M G +PD V+ +L C +S G + L+P +
Sbjct: 286 KNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLL 345
Query: 181 HYGCMVDMYGRAGLFEEAEAFLRAM 205
++DMY + G E+A M
Sbjct: 346 LENALIDMYAKCGCLEKARDVFENM 370
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 6/211 (2%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ +R+VI ++ +YV G E V VF M C P+ T
Sbjct: 100 IPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGC-NVRPDHYTFPCVLKACSCSGTIVI 158
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H T+ L +GN L++MY KCG + + D + +D +SW +++ G A
Sbjct: 159 GRKIHGSA-TKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYA 217
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
N +A+++ M + D T LL S+ +E M+ K M +
Sbjct: 218 QNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT--TTENVMYVKDMFFKMGKKSLV 275
Query: 181 HYGCMVDMYGRAGLFEEAEAFLRAMLVEAEG 211
+ M+ +Y + + EA M EA+G
Sbjct: 276 SWNVMIGVYMKNAMPVEAVELYSRM--EADG 304
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 59/144 (40%), Gaps = 1/144 (0%)
Query: 62 QWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAM 121
+ VHS I DL ++G L+ Y D+ +FD + ++ I +I
Sbjct: 59 RTVHSRI-ILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVN 117
Query: 122 NGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRH 181
NG E V++F M V+PD TF +L CS G + G + L +
Sbjct: 118 NGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFV 177
Query: 182 YGCMVDMYGRAGLFEEAEAFLRAM 205
+V MYG+ G EA L M
Sbjct: 178 GNGLVSMYGKCGFLSEARLVLDEM 201
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 137 bits (344), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 117/221 (52%), Gaps = 9/221 (4%)
Query: 1 MSQRDVISWTTLVMAYVRGGHC---EEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXX 57
+ + D+ +W TL+ AY EE + +F +M + PNE +
Sbjct: 176 IREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRM----QVRPNELSLVALIKSCANLGE 231
Query: 58 XXXXQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVIC 117
W H Y+ + +L + +G +L+++Y KCG + +FD + +D + +I
Sbjct: 232 FVRGVWAHVYV-LKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIR 290
Query: 118 GLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LV 176
GLA++G G+E ++L+ ++ QG+ PD TF+ + CSH GLV EG F +M+ Y +
Sbjct: 291 GLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIE 350
Query: 177 PQMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
P++ HYGC+VD+ GR+G EEAE ++ M V+ +W +
Sbjct: 351 PKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSF 391
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 136 bits (343), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 116/215 (53%), Gaps = 2/215 (0%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M RDV+++ +++ YV+ + EA+ +F M P++ T
Sbjct: 309 MPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSK 368
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+H YI +GG +G AL++MY KCG + + +F+ +E+K W +I GLA
Sbjct: 369 AIDMHLYI-VEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLA 427
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV-PQM 179
++G G+ A + + ++PDD+TF+G+L CSH GLV EG + F+ MR + + P++
Sbjct: 428 IHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRL 487
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIW 214
+HYGCMVD+ R+G E A+ + M VE IW
Sbjct: 488 QHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIW 522
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 87/204 (42%), Gaps = 52/204 (25%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M ++D+ISW +++ YV+ G E+A +F M
Sbjct: 247 MPEKDLISWNSMIDGYVKHGRIEDAKGLFDVM---------------------------- 278
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
R D+V +++ Y K G +H T+FD + H+D +++ +++ G
Sbjct: 279 ---------PRRDVVTWA----TMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYV 325
Query: 121 MNGHGKEAVQLFSLMLVQG-VQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQM 179
N + EA+++FS M + + PDD T + +L + G +S+ Y+V +
Sbjct: 326 QNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHL-----YIVEKQ 380
Query: 180 RHYG-----CMVDMYGRAGLFEEA 198
+ G ++DMY + G + A
Sbjct: 381 FYLGGKLGVALIDMYSKCGSIQHA 404
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 117/218 (53%), Gaps = 3/218 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M++++VISW +++ AYV+ G A+ +F+++ D P+ T
Sbjct: 391 MAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLV-PDSTTIASILPAYAESLSLSE 449
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H+YI + I N+L++MY CGD+ F+ + KD +SW ++I A
Sbjct: 450 GREIHAYI-VKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYA 508
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQM 179
++G G+ +V LFS M+ V P+ TF LL CS G+V EG +F++M+ Y + P +
Sbjct: 509 VHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGI 568
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HYGCM+D+ GR G F A+ FL M IWG+L
Sbjct: 569 EHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSL 606
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 87/208 (41%), Gaps = 5/208 (2%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M QR++++W ++ Y R G +A F++M + +P+ T
Sbjct: 293 MIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEG--- 349
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H Y RG + + AL++MY +CG + IFD + K+ ISW ++I
Sbjct: 350 -RTIHGYAMRRG-FLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYV 407
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
NG A++LF + + PD T +L + +SEG + S
Sbjct: 408 QNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTI 467
Query: 181 HYGCMVDMYGRAGLFEEAEAFLRAMLVE 208
+V MY G E+A +L++
Sbjct: 468 ILNSLVHMYAMCGDLEDARKCFNHILLK 495
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 16/211 (7%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +RD++SW +++ Y+ G ++ +FK+M+ C +P+ +
Sbjct: 191 MPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKC-GFKPDRFSTMSALGACSHVYSPKM 249
Query: 61 XQWVH-----SYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTV 115
+ +H S I+T GD++V +I L+MY K G++ IF+ + ++ ++W +
Sbjct: 250 GKEIHCHAVRSRIET-GDVMVMTSI----LDMYSKYGEVSYAERIFNGMIQRNIVAWNVM 304
Query: 116 ICGLAMNGHGKEAVQLFSLMLVQ-GVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY 174
I A NG +A F M Q G+QPD +T I LL ++ T+ AMR +
Sbjct: 305 IGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLL---PASAILEGRTIHGYAMRRGF 361
Query: 175 LVPQMRHYGCMVDMYGRAGLFEEAEAFLRAM 205
L P M ++DMYG G + AE M
Sbjct: 362 L-PHMVLETALIDMYGECGQLKSAEVIFDRM 391
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 85/207 (41%), Gaps = 3/207 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M++ D W ++ + G EAV + +MV + + T
Sbjct: 90 MNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFA-GVKADTFTYPFVIKSVAGISSLEE 148
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H+ + G V + N+L+++Y+K G +F+ + +D +SW ++I G
Sbjct: 149 GKKIHAMVIKLG-FVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYL 207
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGT-MFFKAMRDSYLVPQM 179
G G ++ LF ML G +PD + + L CSH G + A+R +
Sbjct: 208 ALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDV 267
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAML 206
++DMY + G AE M+
Sbjct: 268 MVMTSILDMYSKYGEVSYAERIFNGMI 294
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 119/218 (54%), Gaps = 2/218 (0%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +++++SW T++ V+G EEA+ VF M + T
Sbjct: 429 MPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDL 488
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+W++ YI+ G + + +G L++M+ +CGD ++IF+ L ++D +W I +A
Sbjct: 489 AKWIYYYIEKNG-IQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMA 547
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV-PQM 179
M G+ + A++LF M+ QG++PD V F+G L CSH GLV +G F +M + V P+
Sbjct: 548 MAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPED 607
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HYGCMVD+ GRAGL EEA + M +E IW +L
Sbjct: 608 VHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSL 645
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 1/156 (0%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
MS+R+V+SWT+++ Y R ++AV +F +MV E PN T
Sbjct: 195 MSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLET 254
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ V+++I G + V + +AL++MY+KC + + +FD + +
Sbjct: 255 GEKVYAFIRNSG-IEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYV 313
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSH 156
G +EA+ +F+LM+ GV+PD ++ + + CS
Sbjct: 314 RQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQ 349
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 89/195 (45%), Gaps = 9/195 (4%)
Query: 9 WTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWVHSYI 68
+ +L+ Y G C EA+ +F +M++ P++ T +H I
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMN-SGISPDKYTFPFGLSACAKSRAKGNGIQIHGLI 160
Query: 69 DTRG---DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHG 125
G DL V N+L++ Y +CG++ +FD + ++ +SW ++ICG A
Sbjct: 161 VKMGYAKDLFVQ----NSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFA 216
Query: 126 KEAVQLFSLMLV-QGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGC 184
K+AV LF M+ + V P+ VT + ++ C+ + G + +R+S +
Sbjct: 217 KDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSA 276
Query: 185 MVDMYGRAGLFEEAE 199
+VDMY + + A+
Sbjct: 277 LVDMYMKCNAIDVAK 291
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 85/222 (38%), Gaps = 34/222 (15%)
Query: 16 YVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWVHSYIDTRGDLV 75
YVR G EA+ VF M+D P+ + + H Y+ R
Sbjct: 312 YVRQGLTREALGVFNLMMD-SGVRPDRISMLSAISSCSQLRNILWGKSCHGYV-LRNGFE 369
Query: 76 VGGNIGNALLNMYVKCGDMHMGLTIFDMLEH----------------------------- 106
NI NAL++MY+KC IFD + +
Sbjct: 370 SWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETM 429
Query: 107 --KDFISWGTVICGLAMNGHGKEAVQLFSLMLVQ-GVQPDDVTFIGLLCRCSHKGLVSEG 163
K+ +SW T+I GL +EA+++F M Q GV D VT + + C H G +
Sbjct: 430 PEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLA 489
Query: 164 TMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAEAFLRAM 205
+ + + + +R +VDM+ R G E A + ++
Sbjct: 490 KWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL 531
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 119/218 (54%), Gaps = 2/218 (0%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +++++SW T++ V+G EEA+ VF M + T
Sbjct: 429 MPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDL 488
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+W++ YI+ G + + +G L++M+ +CGD ++IF+ L ++D +W I +A
Sbjct: 489 AKWIYYYIEKNG-IQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMA 547
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV-PQM 179
M G+ + A++LF M+ QG++PD V F+G L CSH GLV +G F +M + V P+
Sbjct: 548 MAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPED 607
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HYGCMVD+ GRAGL EEA + M +E IW +L
Sbjct: 608 VHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSL 645
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 1/156 (0%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
MS+R+V+SWT+++ Y R ++AV +F +MV E PN T
Sbjct: 195 MSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLET 254
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ V+++I G + V + +AL++MY+KC + + +FD + +
Sbjct: 255 GEKVYAFIRNSG-IEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYV 313
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSH 156
G +EA+ +F+LM+ GV+PD ++ + + CS
Sbjct: 314 RQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQ 349
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 89/195 (45%), Gaps = 9/195 (4%)
Query: 9 WTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWVHSYI 68
+ +L+ Y G C EA+ +F +M++ P++ T +H I
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMN-SGISPDKYTFPFGLSACAKSRAKGNGIQIHGLI 160
Query: 69 DTRG---DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHG 125
G DL V N+L++ Y +CG++ +FD + ++ +SW ++ICG A
Sbjct: 161 VKMGYAKDLFVQ----NSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFA 216
Query: 126 KEAVQLFSLMLV-QGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGC 184
K+AV LF M+ + V P+ VT + ++ C+ + G + +R+S +
Sbjct: 217 KDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSA 276
Query: 185 MVDMYGRAGLFEEAE 199
+VDMY + + A+
Sbjct: 277 LVDMYMKCNAIDVAK 291
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 85/222 (38%), Gaps = 34/222 (15%)
Query: 16 YVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWVHSYIDTRGDLV 75
YVR G EA+ VF M+D P+ + + H Y+ R
Sbjct: 312 YVRQGLTREALGVFNLMMD-SGVRPDRISMLSAISSCSQLRNILWGKSCHGYV-LRNGFE 369
Query: 76 VGGNIGNALLNMYVKCGDMHMGLTIFDMLEH----------------------------- 106
NI NAL++MY+KC IFD + +
Sbjct: 370 SWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETM 429
Query: 107 --KDFISWGTVICGLAMNGHGKEAVQLFSLMLVQ-GVQPDDVTFIGLLCRCSHKGLVSEG 163
K+ +SW T+I GL +EA+++F M Q GV D VT + + C H G +
Sbjct: 430 PEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLA 489
Query: 164 TMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAEAFLRAM 205
+ + + + +R +VDM+ R G E A + ++
Sbjct: 490 KWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL 531
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 135 bits (339), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 119/216 (55%), Gaps = 3/216 (1%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
Q +SW +++ YV E+A +F +M++ P++ T +
Sbjct: 565 QEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEM-GITPDKFTYATVLDTCANLASAGLGK 623
Query: 63 WVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMN 122
+H+ + + +L I + L++MY KCGD+H +F+ +DF++W +ICG A +
Sbjct: 624 QIHAQV-IKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHH 682
Query: 123 GHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQMRH 181
G G+EA+QLF M+++ ++P+ VTFI +L C+H GL+ +G +F M+ Y L PQ+ H
Sbjct: 683 GKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPH 742
Query: 182 YGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
Y MVD+ G++G + A +R M EA+ IW L
Sbjct: 743 YSNMVDILGKSGKVKRALELIREMPFEADDVIWRTL 778
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 3/121 (2%)
Query: 80 IGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQG 139
+ NA ++MY KC + +FD + +D +SW +I NG G E + LF ML
Sbjct: 419 VANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSR 478
Query: 140 VQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGC-MVDMYGRAGLFEEA 198
++PD+ TF +L C+ G + G ++ S + GC ++DMY + G+ EEA
Sbjct: 479 IEPDEFTFGSILKACT-GGSLGYGMEIHSSIVKSGMASN-SSVGCSLIDMYSKCGMIEEA 536
Query: 199 E 199
E
Sbjct: 537 E 537
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 88/213 (41%), Gaps = 23/213 (10%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +RD +SW ++ A+ + G E + +F M+ R EP+E T
Sbjct: 443 MRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSR-IEPDEFTFGSILKACTGGSLGYG 501
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTI----------------FDML 104
+ +HS I G + ++G +L++MY KCG + I + +
Sbjct: 502 ME-IHSSIVKSG-MASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKM 559
Query: 105 EHKDF----ISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLV 160
+K +SW ++I G M ++A LF+ M+ G+ PD T+ +L C++
Sbjct: 560 HNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASA 619
Query: 161 SEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAG 193
G + L + +VDMY + G
Sbjct: 620 GLGKQIHAQVIKKELQSDVYICSTLVDMYSKCG 652
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 86/198 (43%), Gaps = 2/198 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ +++ +SW+ ++ V+ A+ FK+M A +++
Sbjct: 241 IPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKV-NAGVSQSIYASVLRSCAALSELRL 299
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+H++ + D G + A L+MY KC +M +FD E+ + S+ +I G +
Sbjct: 300 GGQLHAHA-LKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYS 358
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
HG +A+ LF ++ G+ D+++ G+ C+ +SEG + S L +
Sbjct: 359 QEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVC 418
Query: 181 HYGCMVDMYGRAGLFEEA 198
+DMYG+ EA
Sbjct: 419 VANAAIDMYGKCQALAEA 436
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 61/136 (44%), Gaps = 1/136 (0%)
Query: 82 NALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQ 141
N ++N Y K DM + F+M+ +D +SW +++ G NG +++++F M +G++
Sbjct: 118 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 177
Query: 142 PDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAEAF 201
D TF +L CS S G + + ++DMY + F E+
Sbjct: 178 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 237
Query: 202 LRAMLVEAEGPIWGAL 217
+ + E W A+
Sbjct: 238 FQG-IPEKNSVSWSAI 252
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 134 bits (338), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 114/214 (53%), Gaps = 3/214 (1%)
Query: 5 DVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWV 64
+V+SWT + + G+ A+ VF +M + PN AT + V
Sbjct: 360 NVVSWTAIFSGCSKNGNFRNALKVFIKMQE-EGVGPNAATMSTLLKILGCLSLLHSGKEV 418
Query: 65 HSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGH 124
H + R +L+ + AL++MY K GD+ + IF +++K SW ++ G AM G
Sbjct: 419 HGFC-LRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGR 477
Query: 125 GKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQMRHYG 183
G+E + FS+ML G++PD +TF +L C + GLV EG +F MR Y ++P + H
Sbjct: 478 GEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCS 537
Query: 184 CMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
CMVD+ GR+G +EA F++ M ++ + IWGA
Sbjct: 538 CMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAF 571
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 94/201 (46%), Gaps = 2/201 (0%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +RD ++W +VM +R G+ E+AV +F++M A+ ++T
Sbjct: 49 MPKRDDLAWNEIVMVNLRSGNWEKAVELFREM-QFSGAKAYDSTMVKLLQVCSNKEGFAE 107
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H Y+ R L ++ N+L+ MY + G + + +F+ ++ ++ SW +++
Sbjct: 108 GRQIHGYV-LRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYT 166
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
G+ +A+ L M + G++PD VT+ LL + KGL + K M+ + L P
Sbjct: 167 KLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTS 226
Query: 181 HYGCMVDMYGRAGLFEEAEAF 201
++ G + +A
Sbjct: 227 SISSLLQAVAEPGHLKLGKAI 247
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 93/210 (44%), Gaps = 2/210 (0%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
+ D+++W +L+ Y G ++A+AV K+M +P+ ++ +
Sbjct: 187 KPDIVTWNSLLSGYASKGLSKDAIAVLKRM-QIAGLKPSTSSISSLLQAVAEPGHLKLGK 245
Query: 63 WVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMN 122
+H YI R L + L++MY+K G + +FDM++ K+ ++W +++ GL+
Sbjct: 246 AIHGYI-LRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYA 304
Query: 123 GHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHY 182
K+A L M +G++PD +T+ L + G + M++ + P + +
Sbjct: 305 CLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSW 364
Query: 183 GCMVDMYGRAGLFEEAEAFLRAMLVEAEGP 212
+ + G F A M E GP
Sbjct: 365 TAIFSGCSKNGNFRNALKVFIKMQEEGVGP 394
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 62/142 (43%)
Query: 64 VHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNG 123
+H + RG + +A + Y +C + +FD + +D ++W ++ +G
Sbjct: 9 IHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSG 68
Query: 124 HGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYG 183
+ ++AV+LF M G + D T + LL CS+K +EG + L +
Sbjct: 69 NWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCN 128
Query: 184 CMVDMYGRAGLFEEAEAFLRAM 205
++ MY R G E + +M
Sbjct: 129 SLIVMYSRNGKLELSRKVFNSM 150
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 134 bits (338), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 114/220 (51%), Gaps = 7/220 (3%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M + ++W+++V YV+ + EEA+ ++++ E N+ T
Sbjct: 223 MQDKSSVTWSSMVAGYVQNKNYEEALLLYRR-AQRMSLEQNQFTLSSVICACSNLAALIE 281
Query: 61 XQWVHSYIDTRGDLVVGGNI--GNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICG 118
+ +H+ I G G N+ ++ ++MY KCG + IF ++ K+ W T+I G
Sbjct: 282 GKQMHAVICKSG---FGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISG 338
Query: 119 LAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVP 177
A + KE + LF M G+ P++VTF LL C H GLV EG FFK MR +Y L P
Sbjct: 339 FAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSP 398
Query: 178 QMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+ HY CMVD+ GRAGL EA ++++ + IWG+L
Sbjct: 399 NVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSL 438
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 89/198 (44%), Gaps = 2/198 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +R ++SW T++ Y R EA+ +F +M + + +E T
Sbjct: 122 MLERSLVSWNTMIGLYTRNRMESEALDIFLEMRN-EGFKFSEFTISSVLSACGVNCDALE 180
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H + + + + +G ALL++Y KCG + + +F+ ++ K ++W +++ G
Sbjct: 181 CKKLHC-LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYV 239
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
N + +EA+ L+ ++ + T ++C CS+ + EG + S +
Sbjct: 240 QNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVF 299
Query: 181 HYGCMVDMYGRAGLFEEA 198
VDMY + G E+
Sbjct: 300 VASSAVDMYAKCGSLRES 317
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 134 bits (338), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 110/216 (50%), Gaps = 4/216 (1%)
Query: 4 RDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQW 63
+DVIS+ +L+ V EE+ +F +M P+ T
Sbjct: 372 KDVISYNSLITGCVVNCRPEESFRLFHEM-RTSGIRPDITTLLGVLTACSHLAALGHGSS 430
Query: 64 VHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNG 123
H Y G V +I NAL++MY KCG + + +FD + +D +SW T++ G ++G
Sbjct: 431 CHGYCVVHG-YAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHG 489
Query: 124 HGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMR--DSYLVPQMRH 181
GKEA+ LF+ M GV PD+VT + +L CSH GLV EG F +M D ++P++ H
Sbjct: 490 LGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDH 549
Query: 182 YGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
Y CM D+ RAG +EA F+ M E + + G L
Sbjct: 550 YNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTL 585
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 74/158 (46%), Gaps = 3/158 (1%)
Query: 7 ISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWVHS 66
I+W ++ AY E+A+ ++ +M++ P + T + +HS
Sbjct: 69 IAWDLMIRAYASNDFAEKALDLYYKMLN-SGVRPTKYTYPFVLKACAGLRAIDDGKLIHS 127
Query: 67 YIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGK 126
+++ D + AL++ Y KCG++ M + +FD + +D ++W +I G +++
Sbjct: 128 HVNC-SDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLT 186
Query: 127 EAVQLF-SLMLVQGVQPDDVTFIGLLCRCSHKGLVSEG 163
+ + LF + + G+ P+ T +G+ G + EG
Sbjct: 187 DVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREG 224
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 73/163 (44%), Gaps = 2/163 (1%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQM-VDCREAEPNEATXXXXXXXXXXXXXXXXX 61
+++ ++W+ ++ YV +EA VF QM V+ A
Sbjct: 268 KKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGG 327
Query: 62 QWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAM 121
+ VH Y + ++ + N +++ Y K G + F + KD IS+ ++I G +
Sbjct: 328 RCVHCYA-VKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVV 386
Query: 122 NGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGT 164
N +E+ +LF M G++PD T +G+L CSH + G+
Sbjct: 387 NCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGS 429
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 61/139 (43%), Gaps = 2/139 (1%)
Query: 62 QWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHK--DFISWGTVICGL 119
Q +H ++ R + + L +Y C ++ + +FD + H + I+W +I
Sbjct: 19 QVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAY 78
Query: 120 AMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQM 179
A N ++A+ L+ ML GV+P T+ +L C+ + +G + + S M
Sbjct: 79 ASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDM 138
Query: 180 RHYGCMVDMYGRAGLFEEA 198
+VD Y + G E A
Sbjct: 139 YVCTALVDFYAKCGELEMA 157
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 134 bits (337), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 121/223 (54%), Gaps = 13/223 (5%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+S ++++SW T+++ +++ G E+ +A F M EP++AT
Sbjct: 195 LSIKNLVSWNTMIVIHLQNGLAEKGLAYF-NMSRRVGHEPDQATFLAVLRSCEDMGVVRL 253
Query: 61 XQWVHSYIDTRGDLVVGGNIGN-----ALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTV 115
Q +H G ++ GG GN ALL++Y K G + T+F + D ++W +
Sbjct: 254 AQGIH------GLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAM 307
Query: 116 ICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYL 175
+ A +G G++A++ F LM+ G+ PD VTF LL CSH GLV EG +F+ M Y
Sbjct: 308 LAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYR 367
Query: 176 V-PQMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+ P++ HY CMVD+ GR+GL ++A ++ M +E +WGAL
Sbjct: 368 IDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGAL 410
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 93/223 (41%), Gaps = 13/223 (5%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREA-EPNEATXXXXXXXXXXXXXXX 59
M +RD++SW +L+ Y G+ + V +M+ PNE T
Sbjct: 92 MPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKE 151
Query: 60 XXQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGL 119
+ +H + G ++ + NA +N Y K GD+ +F+ L K+ +SW T+I
Sbjct: 152 EGRCIHGLVMKFG-VLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIH 210
Query: 120 AMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVS-----EGTMFFKAMRDSY 174
NG ++ + F++ G +PD TF+ +L C G+V G + F +
Sbjct: 211 LQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNK 270
Query: 175 LVPQMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+ ++D+Y + G E++ + + W A+
Sbjct: 271 CITT-----ALLDLYSKLGRLEDSSTVFHE-ITSPDSMAWTAM 307
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 61/118 (51%), Gaps = 2/118 (1%)
Query: 78 GNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLV 137
G IG+ L+ Y++ G +FD + +D +SW ++I G + G+ + ++ S M++
Sbjct: 66 GFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMI 125
Query: 138 Q--GVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAG 193
G +P++VTF+ ++ C + G EG + ++ +++ ++ YG+ G
Sbjct: 126 SEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTG 183
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 134 bits (337), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 116/220 (52%), Gaps = 4/220 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAV-AVFKQMVDCREAEPNEATXXXXXXXXXXXXXXX 59
M +RD++SW +L+ Y + G + V +F +M + +P+ T
Sbjct: 326 MPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELS 385
Query: 60 XXQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGL 119
+WVH + R L + +AL++MY KCG + +F KD W ++I GL
Sbjct: 386 HGRWVHGLV-IRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGL 444
Query: 120 AMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQ 178
A +G+G++A+QLF M +GV P++VT + +L CSH GLV EG F M+D + P+
Sbjct: 445 AFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPE 504
Query: 179 MRHYGCMVDMYGRAGLFEEAEAFL-RAMLVEAEGPIWGAL 217
HYG +VD+ RAG EEA+ + + M + +WG++
Sbjct: 505 TEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSI 544
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 107/257 (41%), Gaps = 48/257 (18%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M DV S+ +++ Y + G EA+ ++ +MV EP+E T
Sbjct: 192 MPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVS-DGIEPDEYTVLSLLVCCGHLSDIRL 250
Query: 61 XQWVHSYIDTRGDLVVGGNI-GNALLNMYVKC---------------------------- 91
+ VH +I+ RG + I NALL+MY KC
Sbjct: 251 GKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGF 310
Query: 92 ---GDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQ--LFSLMLVQGVQPDDVT 146
GDM +FD + +D +SW +++ G + G + V+ + + +V+ V+PD VT
Sbjct: 311 VRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVT 370
Query: 147 FIGLLCRCSHKGLVSEG------TMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAEA 200
+ L+ ++ G +S G + + D++L ++DMY + G+ E A
Sbjct: 371 MVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLS------SALIDMYCKCGIIERAFM 424
Query: 201 FLRAMLVEAEGPIWGAL 217
+ E + +W ++
Sbjct: 425 VFKTA-TEKDVALWTSM 440
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%)
Query: 64 VHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNG 123
+H +I G L +G + N+L+ Y++ G+ + +F + H D S+ +I G A G
Sbjct: 152 IHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQG 211
Query: 124 HGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSH 156
EA++L+ M+ G++PD+ T + LL C H
Sbjct: 212 FSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGH 244
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 134 bits (337), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 109/213 (51%), Gaps = 2/213 (0%)
Query: 5 DVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWV 64
+VI+W ++ +YV E+A+A+F +MV +P+ T Q +
Sbjct: 497 NVITWNAMIASYVHCEQSEKAIALFDRMVS-ENFKPSSITLVTLLMACVNTGSLERGQMI 555
Query: 65 HSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGH 124
H YI T + + ++ AL++MY KCG + +FD KD + W +I G M+G
Sbjct: 556 HRYI-TETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGD 614
Query: 125 GKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGC 184
+ A+ LF M V+P TF+ LL C+H GLV +G F M + P ++HY C
Sbjct: 615 VESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSC 674
Query: 185 MVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+VD+ R+G EEAE+ + +M +G IWG L
Sbjct: 675 LVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTL 707
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/198 (19%), Positives = 89/198 (44%), Gaps = 5/198 (2%)
Query: 8 SWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWVHSY 67
+W T++ Y + + + +F+++ + E + A+ + +H Y
Sbjct: 400 AWNTMLKGYGKMKCHVKCIELFRKIQNLG-IEIDSASATSVISSCSHIGAVLLGKSLHCY 458
Query: 68 I-DTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGK 126
+ T DL + ++ N+L+++Y K GD+ + +F + + I+W +I +
Sbjct: 459 VVKTSLDLTI--SVVNSLIDLYGKMGDLTVAWRMFCEAD-TNVITWNAMIASYVHCEQSE 515
Query: 127 EAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMV 186
+A+ LF M+ + +P +T + LL C + G + G M + + ++ + ++
Sbjct: 516 KAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALI 575
Query: 187 DMYGRAGLFEEAEAFLRA 204
DMY + G E++ A
Sbjct: 576 DMYAKCGHLEKSRELFDA 593
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 82/219 (37%), Gaps = 3/219 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREA--EPNEATXXXXXXXXXXXXXX 58
M RDV++WT ++ +V+ G E + +M +PN T
Sbjct: 187 MPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGAL 246
Query: 59 XXXQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICG 118
+ +H + G L + +++ + Y K G+ F L +D SW ++I
Sbjct: 247 KEGRCLHGFAVKNG-LASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIAS 305
Query: 119 LAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQ 178
LA +G +E+ +F M +G+ PD V L+ LV +G F +
Sbjct: 306 LARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLD 365
Query: 179 MRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
++ MY + L AE + E W +
Sbjct: 366 STVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTM 404
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 76/208 (36%), Gaps = 4/208 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+++RD+ W +++ A+ G ++ F M+ ++ P+ T
Sbjct: 85 VTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQS-PDHFTAPMVVSACAELLWFHV 143
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+VH + G +G + + Y KCG + +FD + +D ++W +I G
Sbjct: 144 GTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHV 203
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLC---RCSHKGLVSEGTMFFKAMRDSYLVP 177
NG + + M G D L C CS+ G + EG + L
Sbjct: 204 QNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLAS 263
Query: 178 QMRHYGCMVDMYGRAGLFEEAEAFLRAM 205
M Y ++G EA R +
Sbjct: 264 SKFVQSSMFSFYSKSGNPSEAYLSFREL 291
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/194 (20%), Positives = 82/194 (42%), Gaps = 3/194 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ D+ SWT+++ + R G EE+ +F +M + + P+
Sbjct: 291 LGDEDMFSWTSIIASLARSGDMEESFDMFWEMQN-KGMHPDGVVISCLINELGKMMLVPQ 349
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIF-DMLEHKDFISWGTVICGL 119
+ H ++ R + + N+LL+MY K + + +F + E + +W T++ G
Sbjct: 350 GKAFHGFV-IRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGY 408
Query: 120 AMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQM 179
+ ++LF + G++ D + ++ CSH G V G + + L +
Sbjct: 409 GKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTI 468
Query: 180 RHYGCMVDMYGRAG 193
++D+YG+ G
Sbjct: 469 SVVNSLIDLYGKMG 482
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 134 bits (336), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 109/215 (50%), Gaps = 3/215 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ Q D +SW + A R + EE + +FK M+ P++ T
Sbjct: 505 LEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQ-SNIRPDKYTFVSILSLCSKLCDLTL 563
Query: 61 XQWVHSYIDTRGDLVVGGN-IGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGL 119
+H I T+ D + N L++MY KCG + + +F+ K+ I+W +I L
Sbjct: 564 GSSIHGLI-TKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCL 622
Query: 120 AMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQM 179
++G+G+EA++ F L G +PD V+FI +L C H G+V EG F+ M+D + P+M
Sbjct: 623 GIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYGVEPEM 682
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIW 214
HY C VD+ R G +EAE +R M A+ P+W
Sbjct: 683 DHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVW 717
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 3/150 (2%)
Query: 5 DVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWV 64
D++SW ++ A + + +A+ +F M + PN+ T + +
Sbjct: 280 DIVSWNAIICATAKSENPLKALKLFVSMPE-HGFSPNQGTYVSVLGVSSLVQLLSCGRQI 338
Query: 65 HSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGH 124
H + G G +GNAL++ Y KCG++ FD + K+ + W ++ G A N
Sbjct: 339 HGMLIKNG-CETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKD 396
Query: 125 GKEAVQLFSLMLVQGVQPDDVTFIGLLCRC 154
G + LF ML G +P + TF L C
Sbjct: 397 GPICLSLFLQMLQMGFRPTEYTFSTALKSC 426
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Query: 82 NALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQ 141
N + +Y + G H + + LE D +SW I + + + +E ++LF ML ++
Sbjct: 483 NIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIR 542
Query: 142 PDDVTFIGLLCRCSHKGLVSEGTMFFKAM-RDSYLVPQMRHYGCMVDMYGRAG 193
PD TF+ +L CS ++ G+ + + + ++DMYG+ G
Sbjct: 543 PDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCG 595
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 58/121 (47%)
Query: 79 NIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQ 138
++ N+L++ Y KCG+ HM +F D +SW +IC A + + +A++LF M
Sbjct: 251 SVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEH 310
Query: 139 GVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEA 198
G P+ T++ +L S L+S G + + + ++D Y + G E++
Sbjct: 311 GFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDS 370
Query: 199 E 199
Sbjct: 371 R 371
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 134 bits (336), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 76/224 (33%), Positives = 116/224 (51%), Gaps = 12/224 (5%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +++VISWTT++ YV EEA+ VF +M+ +PN T
Sbjct: 290 MPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVE 349
Query: 61 XQWVHSYIDT----RGDLVVGGNIGNALLNMYVKCGDMHMGLTIFD--MLEHKDFISWGT 114
Q +H I + ++V ALLNMY K G++ +FD ++ +D ISW +
Sbjct: 350 GQQIHQLISKSVHQKNEIVTS-----ALLNMYSKSGELIAARKMFDNGLVCQRDLISWNS 404
Query: 115 VICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAM-RDS 173
+I A +GHGKEA+++++ M G +P VT++ LL CSH GLV +G FFK + RD
Sbjct: 405 MIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDE 464
Query: 174 YLVPQMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
L + HY C+VD+ GRAG ++ F+ +GA+
Sbjct: 465 SLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAI 508
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 11/194 (5%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +RDV+SWT +V + G +EA +F DC E N +
Sbjct: 197 MPRRDVVSWTAMVDGLAKNGKVDEARRLF----DCM-PERNIISWNAMITGYAQNNRIDE 251
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ + R D N ++ +++ +M+ +FD + K+ ISW T+I G
Sbjct: 252 ADQLFQVMPER-DFASW----NTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYV 306
Query: 121 MNGHGKEAVQLFSLMLVQG-VQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQM 179
N +EA+ +FS ML G V+P+ T++ +L CS + EG + + S
Sbjct: 307 ENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNE 366
Query: 180 RHYGCMVDMYGRAG 193
+++MY ++G
Sbjct: 367 IVTSALLNMYSKSG 380
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 88/205 (42%), Gaps = 17/205 (8%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ +RDV++WT ++ Y++ G EA +F + VD R+ N T
Sbjct: 72 LPERDVVTWTHVITGYIKLGDMREARELFDR-VDSRK---NVVTWTAMVSGYLRSKQLSI 127
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ + + R VV N +++ Y + G + L +FD + ++ +SW +++ L
Sbjct: 128 AEMLFQEMPERN--VVSWN---TMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALV 182
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
G EA+ LF M + V V++ ++ + G V E F M + ++
Sbjct: 183 QRGRIDEAMNLFERMPRRDV----VSWTAMVDGLAKNGKVDEARRLFDCMPERNIIS--- 235
Query: 181 HYGCMVDMYGRAGLFEEAEAFLRAM 205
+ M+ Y + +EA+ + M
Sbjct: 236 -WNAMITGYAQNNRIDEADQLFQVM 259
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 133 bits (335), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 111/214 (51%), Gaps = 3/214 (1%)
Query: 5 DVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWV 64
D +SW T++ A ++ E + +FK M+ E EP+ T V
Sbjct: 437 DSVSWNTILTACLQHEQPVEMLRLFKLML-VSECEPDHITMGNLLRGCVEISSLKLGSQV 495
Query: 65 HSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGH 124
H Y G L I N L++MY KCG + IFD ++++D +SW T+I G A +G
Sbjct: 496 HCYSLKTG-LAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGF 554
Query: 125 GKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQMRHYG 183
G+EA+ LF M G++P+ VTF+G+L CSH GLV EG + M+ + + P H
Sbjct: 555 GEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCS 614
Query: 184 CMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
C+VD+ RAG EAE F+ M +E + +W L
Sbjct: 615 CVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTL 648
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 77/160 (48%), Gaps = 1/160 (0%)
Query: 4 RDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQW 63
+D+ISW++++ + + G EA++ K+M+ PNE
Sbjct: 232 KDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQ 291
Query: 64 VHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNG 123
+H + + +L G +L +MY +CG ++ +FD +E D SW +I GLA NG
Sbjct: 292 IHG-LCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNG 350
Query: 124 HGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEG 163
+ EAV +FS M G PD ++ LLC + +S+G
Sbjct: 351 YADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQG 390
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 88/208 (42%), Gaps = 7/208 (3%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAE--PNEATXXXXXXXXXXXXXX 58
+ + D SW ++ G+ +EAV+VF QM R + P+ +
Sbjct: 331 IERPDTASWNVIIAGLANNGYADEAVSVFSQM---RSSGFIPDAISLRSLLCAQTKPMAL 387
Query: 59 XXXQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIF-DMLEHKDFISWGTVIC 117
+HSYI G + + N+LL MY C D++ +F D + D +SW T++
Sbjct: 388 SQGMQIHSYIIKWG-FLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILT 446
Query: 118 GLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVP 177
+ E ++LF LMLV +PD +T LL C + G+ + L P
Sbjct: 447 ACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAP 506
Query: 178 QMRHYGCMVDMYGRAGLFEEAEAFLRAM 205
+ ++DMY + G +A +M
Sbjct: 507 EQFIKNGLIDMYAKCGSLGQARRIFDSM 534
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 8/123 (6%)
Query: 80 IGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQG 139
+ N +L+MY KCG + +FD + ++ +S+ +VI G + NG G EA++L+ ML +
Sbjct: 104 LNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQED 163
Query: 140 VQPDDVTFIGLLCRCSHKGLVSEGTMF----FKAMRDSYLVPQMRHYGCMVDMYGRAGLF 195
+ PD F ++ C+ V G K S+L+ Q ++ MY R
Sbjct: 164 LVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQ----NALIAMYVRFNQM 219
Query: 196 EEA 198
+A
Sbjct: 220 SDA 222
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 89/216 (41%), Gaps = 13/216 (6%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +R+++S+T+++ Y + G EA+ ++ +M+ + P++
Sbjct: 128 MPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQ-EDLVPDQFAFGSIIKACASSSDVGL 186
Query: 61 XQWVHSYI---DTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVIC 117
+ +H+ + ++ L+ NAL+ MYV+ M +F + KD ISW ++I
Sbjct: 187 GKQLHAQVIKLESSSHLIAQ----NALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIA 242
Query: 118 GLAMNGHGKEAVQLFSLMLVQGV-QPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV 176
G + G EA+ ML GV P++ F L CS G+ S L
Sbjct: 243 GFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELA 302
Query: 177 PQMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGP 212
+ DMY R G A R + + E P
Sbjct: 303 GNAIAGCSLCDMYARCGFLNSA----RRVFDQIERP 334
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 133 bits (335), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 118/220 (53%), Gaps = 7/220 (3%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ QR +SWT L+ YV+ G + +F +M +++T
Sbjct: 412 LPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGS-NLRADQSTFATVLKASASFASLLL 470
Query: 61 XQWVHSYIDTRGDLVVGGNI--GNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICG 118
+ +H++I G+L N+ G+ L++MY KCG + + +F+ + ++ +SW +I
Sbjct: 471 GKQLHAFIIRSGNL---ENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISA 527
Query: 119 LAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVP 177
A NG G+ A+ F+ M+ G+QPD V+ +G+L CSH G V +GT +F+AM Y + P
Sbjct: 528 HADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITP 587
Query: 178 QMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+ +HY CM+D+ GR G F EAE + M E + +W ++
Sbjct: 588 KKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSV 627
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 70/155 (45%), Gaps = 6/155 (3%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAE---PNEATXXXXXXXXXXXXX 57
M R V++WT L+ Y R H +EA +F+QM CR + P+ T
Sbjct: 105 MPDRTVVTWTILMGWYARNSHFDEAFKLFRQM--CRSSSCTLPDHVTFTTLLPGCNDAVP 162
Query: 58 XXXXQWVHSYIDTRG-DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVI 116
VH++ G D + N LL Y + + + +F+ + KD +++ T+I
Sbjct: 163 QNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLI 222
Query: 117 CGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLL 151
G +G E++ LF M G QP D TF G+L
Sbjct: 223 TGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVL 257
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 95/224 (42%), Gaps = 17/224 (7%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREA--EPNEATXXXXXXXXXXXXXX 58
+ ++D +++ TL+ Y + G E++ +F +M R++ +P++ T
Sbjct: 210 IPEKDSVTFNTLITGYEKDGLYTESIHLFLKM---RQSGHQPSDFTFSGVLKAVVGLHDF 266
Query: 59 XXXQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICG 118
Q +H+ T G ++GN +L+ Y K + +FD + DF+S+ VI
Sbjct: 267 ALGQQLHALSVTTG-FSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISS 325
Query: 119 LAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMF----FKAMRDSY 174
+ + ++ F M G + F +L ++ + G A DS
Sbjct: 326 YSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSI 385
Query: 175 LVPQMRHYG-CMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
L H G +VDMY + +FEEAE ++ L + W AL
Sbjct: 386 L-----HVGNSLVDMYAKCEMFEEAELIFKS-LPQRTTVSWTAL 423
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 86/219 (39%), Gaps = 7/219 (3%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M + D +S+ ++ +Y + E ++ F++M C +
Sbjct: 311 MPELDFVSYNVVISSYSQADQYEASLHFFREM-QCMGFDRRNFPFATMLSIAANLSSLQM 369
Query: 61 XQWVH-SYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGL 119
+ +H + D ++ ++GN+L++MY KC IF L + +SW +I G
Sbjct: 370 GRQLHCQALLATADSIL--HVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGY 427
Query: 120 AMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLL-CRCSHKGLVSEGTMFFKAMRDSYLVPQ 178
G ++LF+ M ++ D TF +L S L+ + +R L
Sbjct: 428 VQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENV 487
Query: 179 MRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
G +VDMY + G ++A M + W AL
Sbjct: 488 FSGSG-LVDMYAKCGSIKDAVQVFEEM-PDRNAVSWNAL 524
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 133 bits (335), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 116/214 (54%), Gaps = 2/214 (0%)
Query: 4 RDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQW 63
RD++ W TL+ Y + G+ ++A+ F M EP+ T +
Sbjct: 237 RDLVIWNTLIAGYAQNGYSDDAIDAFFNM-QGEGYEPDAVTVSSILSACAQSGRLDVGRE 295
Query: 64 VHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNG 123
VHS I+ RG + + + NAL++MY KCGD+ ++F+ + + ++I LA++G
Sbjct: 296 VHSLINHRG-IELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHG 354
Query: 124 HGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYG 183
GKEA+++FS M ++PD++TFI +L C H G + EG F M+ + P ++H+G
Sbjct: 355 KGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFG 414
Query: 184 CMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
C++ + GR+G +EA ++ M V+ + GAL
Sbjct: 415 CLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGAL 448
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 92/233 (39%), Gaps = 24/233 (10%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREA--------------EPNEATXX 46
M +R+V +W ++ Y+ G A +F+++ CR E +A
Sbjct: 107 MPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKAREL 166
Query: 47 XXXXXXXXXXXXXXXQWVHSYIDTRG--------DLVVGGN--IGNALLNMYVKCGDMHM 96
+ Y++ R + + N + + +++ Y + GD+H
Sbjct: 167 FERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHE 226
Query: 97 GLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSH 156
IF + +D + W T+I G A NG+ +A+ F M +G +PD VT +L C+
Sbjct: 227 ARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQ 286
Query: 157 KGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEA 209
G + G + + ++DMY + G E A + ++ V +
Sbjct: 287 SGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRS 339
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 118/219 (53%), Gaps = 8/219 (3%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
+D +S+ +++ Y + G EA VF+++V + N T +
Sbjct: 248 DKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGK 307
Query: 63 WVHSYIDTRG---DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGL 119
+H + G D++VG +I ++MY KCG + FD +++K+ SW +I G
Sbjct: 308 CIHDQVIRMGLEDDVIVGTSI----IDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGY 363
Query: 120 AMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV-PQ 178
M+GH +A++LF M+ GV+P+ +TF+ +L CSH GL EG +F AM+ + V P
Sbjct: 364 GMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPG 423
Query: 179 MRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+ HYGCMVD+ GRAG ++A ++ M ++ + IW +L
Sbjct: 424 LEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSL 462
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 100/213 (46%), Gaps = 12/213 (5%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEAT------XXXXXXXXXX 54
+ +R+++SWT+++ Y G+ +AV++FK ++ E + ++A
Sbjct: 137 IPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLL-VDENDDDDAMFLDSMGLVSVISACSR 195
Query: 55 XXXXXXXQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGD--MHMGLTIFDMLEHKDFISW 112
+ +HS++ RG G ++GN LL+ Y K G+ + + IFD + KD +S+
Sbjct: 196 VPAKGLTESIHSFVIKRG-FDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSY 254
Query: 113 GTVICGLAMNGHGKEAVQLFSLMLVQGVQP-DDVTFIGLLCRCSHKGLVSEGTMFFKAMR 171
+++ A +G EA ++F ++ V + +T +L SH G + G +
Sbjct: 255 NSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVI 314
Query: 172 DSYLVPQMRHYGCMVDMYGRAGLFEEA-EAFLR 203
L + ++DMY + G E A +AF R
Sbjct: 315 RMGLEDDVIVGTSIIDMYCKCGRVETARKAFDR 347
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 12/153 (7%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQM-----VDCREAEPNEATXXXXXXXXXXX 55
+ + DV SW +++ R G EA+ F M R + P
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 56 XXXXXXQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTV 115
+V Y + D+ V +AL+ MY CG + +FD + ++ +SW ++
Sbjct: 96 KQTHQQAFVFGY---QSDIFVS----SALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSM 148
Query: 116 ICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFI 148
I G +NG+ +AV LF +LV DD F+
Sbjct: 149 IRGYDLNGNALDAVSLFKDLLVDENDDDDAMFL 181
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 132 bits (331), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 122/227 (53%), Gaps = 14/227 (6%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +R V++W ++ + + G EEAV F M+ PNE+T
Sbjct: 185 MPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGA 244
Query: 61 XQWVHS----YIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLE--HKDFISWGT 114
+ +H+ ++ R ++ V N+L++ Y KCG+M L F+ LE ++ +SW +
Sbjct: 245 GKSIHACAIKFLGKRFNVFVW----NSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNS 300
Query: 115 VICGLAMNGHGKEAVQLFSLMLVQ-GVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDS 173
+I G A NG G+EAV +F M+ ++P++VT +G+L C+H GL+ EG M+F +
Sbjct: 301 MIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVND 360
Query: 174 YLVP---QMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
Y P ++ HY CMVDM R+G F+EAE +++M ++ W AL
Sbjct: 361 YDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKAL 407
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 76/187 (40%), Gaps = 7/187 (3%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ + DVIS T ++ +V+ EA FK+++ C PNE T
Sbjct: 53 IPELDVISATAVIGRFVKESRHVEASQAFKRLL-CLGIRPNEFTFGTVIGSSTTSRDVKL 111
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H Y G L +G+A+LN YVK + FD + +S +I G
Sbjct: 112 GKQLHCYALKMG-LASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYL 170
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEG-TMFFKAMRDSYLVPQM 179
+EA+ LF M + V VT+ ++ S G E F +R+ ++P
Sbjct: 171 KKHEFEEALSLFRAMPERSV----VTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNE 226
Query: 180 RHYGCMV 186
+ C +
Sbjct: 227 STFPCAI 233
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 132 bits (331), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 111/214 (51%), Gaps = 3/214 (1%)
Query: 5 DVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWV 64
D ++WTT++ + G E A VF QM P+E T + +
Sbjct: 582 DDVAWTTMISGCIENGEEERAFHVFSQM-RLMGVLPDEFTIATLAKASSCLTALEQGRQI 640
Query: 65 HSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGH 124
H+ + + +G +L++MY KCG + +F +E + +W ++ GLA +G
Sbjct: 641 HANA-LKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGE 699
Query: 125 GKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQMRHYG 183
GKE +QLF M G++PD VTFIG+L CSH GLVSE ++M Y + P++ HY
Sbjct: 700 GKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYS 759
Query: 184 CMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
C+ D GRAGL ++AE + +M +EA ++ L
Sbjct: 760 CLADALGRAGLVKQAENLIESMSMEASASMYRTL 793
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 84/192 (43%), Gaps = 17/192 (8%)
Query: 16 YVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWVHSYIDTRG-DL 74
Y+ G + F MV+ + E ++ T Q VH G DL
Sbjct: 290 YLHSGQYSALLKCFADMVES-DVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDL 348
Query: 75 VVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSL 134
++ + N+L+NMY K T+FD + +D ISW +VI G+A NG EAV LF
Sbjct: 349 ML--TVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQ 406
Query: 135 MLVQGVQPDDVTFIGLLCRCSH--KGLVSEGTMFFKAMR-----DSYLVPQMRHYGCMVD 187
+L G++PD T +L S +GL + A++ DS++ ++D
Sbjct: 407 LLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVST------ALID 460
Query: 188 MYGRAGLFEEAE 199
Y R +EAE
Sbjct: 461 AYSRNRCMKEAE 472
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 84/208 (40%), Gaps = 20/208 (9%)
Query: 5 DVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWV 64
D+++W ++ Y + + + +F M E ++ T + V
Sbjct: 481 DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGE-RSDDFTLATVFKTCGFLFAINQGKQV 539
Query: 65 HSYIDTRG---DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAM 121
H+Y G DL V I L+MYVKCGDM FD + D ++W T+I G
Sbjct: 540 HAYAIKSGYDLDLWVSSGI----LDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIE 595
Query: 122 NGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEG------TMFFKAMRDSYL 175
NG + A +FS M + GV PD+ T L S + +G + D ++
Sbjct: 596 NGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFV 655
Query: 176 VPQMRHYGCMVDMYGRAGLFEEAEAFLR 203
+VDMY + G ++A +
Sbjct: 656 GTS------LVDMYAKCGSIDDAYCLFK 677
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 91/201 (45%), Gaps = 6/201 (2%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXX-XX 59
MS+RD+ISW +++ + G EAV +F Q++ C +P++ T
Sbjct: 376 MSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRC-GLKPDQYTMTSVLKAASSLPEGLS 434
Query: 60 XXQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGL 119
+ VH + + + V + AL++ Y + M +F+ + D ++W ++ G
Sbjct: 435 LSKQVHVHA-IKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGY 492
Query: 120 AMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFK-AMRDSYLVPQ 178
+ G + ++LF+LM QG + DD T + C +++G A++ Y +
Sbjct: 493 TQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDL 552
Query: 179 MRHYGCMVDMYGRAGLFEEAE 199
G ++DMY + G A+
Sbjct: 553 WVSSG-ILDMYVKCGDMSAAQ 572
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 73/163 (44%), Gaps = 14/163 (8%)
Query: 1 MSQRDVISWTTLVMAYVRGGHC-----EEAVAVFKQMVDCREAEPNEATXXXXXXXXXXX 55
M RD++SW +++ AY + C ++A +F+ ++ + T
Sbjct: 100 MPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFR-ILRQDVVYTSRMTLSPMLKLCLHS 158
Query: 56 XXXXXXQWVHSY---IDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISW 112
+ H Y I GD V G AL+N+Y+K G + G +F+ + ++D + W
Sbjct: 159 GYVWASESFHGYACKIGLDGDEFVAG----ALVNIYLKFGKVKEGKVLFEEMPYRDVVLW 214
Query: 113 GTVICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCS 155
++ G +EA+ L S G+ P+++T + LL R S
Sbjct: 215 NLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEIT-LRLLARIS 256
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 132 bits (331), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/255 (34%), Positives = 125/255 (49%), Gaps = 43/255 (16%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVF-----KQMVD--------CREAEPNEATXXX 47
M +RDVISWT L+ AY R G+ E A +F K MV + A+P EA
Sbjct: 210 MPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYF 269
Query: 48 XXXXXXXXXXXXXXQWVHSYID-----------------------TRGDLVVGGNIGNAL 84
V YI + D VV IG+AL
Sbjct: 270 DRMEKSGIRADEVT--VAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVV---IGSAL 324
Query: 85 LNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQG-VQPD 143
++MY KCG++ + +F + +K+ ++ ++I GLA +G +EA+ LF M+ Q ++P+
Sbjct: 325 IDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPN 384
Query: 144 DVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV-PQMRHYGCMVDMYGRAGLFEEAEAFL 202
VTF+G L CSH GLV +G F +M ++ V P HY CMVD+ GR G +EA +
Sbjct: 385 TVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELI 444
Query: 203 RAMLVEAEGPIWGAL 217
+ M VE G +WGAL
Sbjct: 445 KTMSVEPHGGVWGAL 459
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 87/230 (37%), Gaps = 39/230 (16%)
Query: 4 RDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQW 63
R+ WT ++ Y G +EA+A++ M E P T +
Sbjct: 112 RNPFLWTAVIRGYAIEGKFDEAIAMYGCMRK-EEITPVSFTFSALLKACGTMKDLNLGRQ 170
Query: 64 VHSY-IDTRGDLVVGGNIGNALLNMYVKC------------------------------- 91
H+ RG V +GN +++MYVKC
Sbjct: 171 FHAQTFRLRGFCFV--YVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARV 228
Query: 92 GDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLL 151
G+M +F+ L KD ++W ++ G A N +EA++ F M G++ D+VT G +
Sbjct: 229 GNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYI 288
Query: 152 CRCSHKGLVSEGTMFFKAMRDSYLVPQMRHY---GCMVDMYGRAGLFEEA 198
C+ G + + S P H ++DMY + G EEA
Sbjct: 289 SACAQLGASKYADRAVQIAQKSGYSPS-DHVVIGSALIDMYSKCGNVEEA 337
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 132 bits (331), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 117/214 (54%), Gaps = 3/214 (1%)
Query: 5 DVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWV 64
+V+SWT+++ + G EA+ +F++M +PN T +
Sbjct: 352 NVVSWTSIIAGCAQNGKDIEALELFREM-QVAGVKPNHVTIPSMLPACGNIAALGHGRST 410
Query: 65 HSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGH 124
H + R L+ ++G+AL++MY KCG +++ +F+M+ K+ + W +++ G +M+G
Sbjct: 411 HGFA-VRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGK 469
Query: 125 GKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQMRHYG 183
KE + +F ++ ++PD ++F LL C GL EG +FK M + Y + P++ HY
Sbjct: 470 AKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYS 529
Query: 184 CMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
CMV++ GRAG +EA ++ M E + +WGAL
Sbjct: 530 CMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGAL 563
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 97/238 (40%), Gaps = 37/238 (15%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
+ +++SW ++ + R G+ +EAV +F Q + P++ T +
Sbjct: 214 EANIVSWNGILSGFNRSGYHKEAVVMF-QKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGR 272
Query: 63 WVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLE----------------- 105
+H Y+ +G L+ + +A+++MY K G ++ +++F+ E
Sbjct: 273 LIHGYVIKQG-LLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRN 331
Query: 106 ------------------HKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTF 147
+ +SW ++I G A NG EA++LF M V GV+P+ VT
Sbjct: 332 GLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTI 391
Query: 148 IGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAEAFLRAM 205
+L C + + G +L+ + ++DMY + G ++ M
Sbjct: 392 PSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMM 449
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 48/95 (50%)
Query: 83 ALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQP 142
++ +MY++CG M +FD + KD ++ ++C A G +E V++ S M G++
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 143 DDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVP 177
+ V++ G+L + G E + F+ + P
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCP 250
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 132 bits (331), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 110/219 (50%), Gaps = 6/219 (2%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M+ +DV+S +T++ G +EA+++F M D PN T
Sbjct: 389 MTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRD----TPNAITVISLLNACSVSADLRT 444
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+W H R + ++G ++++ Y KCG + M FD + K+ ISW +I A
Sbjct: 445 SKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYA 504
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
+NG +A+ LF M +G P+ VT++ L C+H GLV +G M FK+M + P ++
Sbjct: 505 INGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQ 564
Query: 181 HYGCMVDMYGRAGLFEEAEAFLRAML--VEAEGPIWGAL 217
HY C+VDM RAG + A ++ + V+A WGA+
Sbjct: 565 HYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAI 603
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 79/154 (51%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
MS+RDVISW+ ++ +YV+ + +FK+MV + EP+ T
Sbjct: 185 MSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDV 244
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ VH + RG + + N+L++MY K D+ +FD ++ +SW +++ G
Sbjct: 245 GRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFV 304
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRC 154
N EA+++F LM+ + V+ D+VT + LL C
Sbjct: 305 HNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVC 338
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 85/198 (42%), Gaps = 8/198 (4%)
Query: 4 RDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQW 63
R+++SW +++ +V +EA+ +F MV E +E T +
Sbjct: 291 RNIVSWNSILAGFVHNQRYDEALEMFHLMVQ-EAVEVDEVTVVSLLRVCKFFEQPLPCKS 349
Query: 64 VHSYIDTRGDLVVGGNIG-NALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMN 122
+H I RG + ++L++ Y C + T+ D + +KD +S T+I GLA
Sbjct: 350 IHGVIIRRG--YESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHA 407
Query: 123 GHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCS-HKGLVSEGTMFFKAMRDSYLVPQMRH 181
G EA+ +F M P+ +T I LL CS L + A+R S + +
Sbjct: 408 GRSDEAISIFCHM---RDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISV 464
Query: 182 YGCMVDMYGRAGLFEEAE 199
+VD Y + G E A
Sbjct: 465 GTSIVDAYAKCGAIEMAR 482
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%)
Query: 81 GNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGV 140
GN++ + Y+KCGD+ GL FD + +D +SW ++ GL G +E + FS + V G
Sbjct: 64 GNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGF 123
Query: 141 QPDDVTFIGLLCRC 154
+P+ T + ++ C
Sbjct: 124 EPNTSTLVLVIHAC 137
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 132 bits (331), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 109/218 (50%), Gaps = 3/218 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M Q++V+SWT +V+ Y + G EEAV +F M +P+ T
Sbjct: 331 MKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRS-GIDPDHYTLGQAISACANVSSLEE 389
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
H T G L+ + N+L+ +Y KCGD+ +F+ + +D +SW ++ A
Sbjct: 390 GSQFHGKAITSG-LIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYA 448
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQM 179
G E +QLF M+ G++PD VT G++ CS GLV +G +FK M Y +VP +
Sbjct: 449 QFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSI 508
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HY CM+D++ R+G EEA F+ M + W L
Sbjct: 509 GHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTL 546
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 99/215 (46%), Gaps = 3/215 (1%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
++D +SW ++ + G +EA+ F++M + + ++ +
Sbjct: 232 EKDSVSWAAMIKGLAQNGLAKEAIECFREM-KVQGLKMDQYPFGSVLPACGGLGAINEGK 290
Query: 63 WVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMN 122
+H+ I R + +G+AL++MY KC +H T+FD ++ K+ +SW ++ G
Sbjct: 291 QIHACI-IRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQT 349
Query: 123 GHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHY 182
G +EAV++F M G+ PD T + C++ + EG+ F S L+ +
Sbjct: 350 GRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVS 409
Query: 183 GCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+V +YG+ G +++ M V + W A+
Sbjct: 410 NSLVTLYGKCGDIDDSTRLFNEMNVR-DAVSWTAM 443
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 88/235 (37%), Gaps = 31/235 (13%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ RD ++W L+ Y G AV + M+ A T
Sbjct: 98 LPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSL 157
Query: 61 XQWVHSYIDTRG---DLVVG-------GNIG--------------------NALLNMYVK 90
+ +H + G L+VG N+G N+L+ +
Sbjct: 158 GKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLA 217
Query: 91 CGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGL 150
CG + L +F +E KD +SW +I GLA NG KEA++ F M VQG++ D F +
Sbjct: 218 CGMIEDALQLFRGME-KDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSV 276
Query: 151 LCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAEAFLRAM 205
L C G ++EG + + + ++DMY + A+ M
Sbjct: 277 LPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRM 331
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 132 bits (331), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 117/219 (53%), Gaps = 3/219 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +++V SWTT++ + + G+ EA+ +F M + +PN T
Sbjct: 174 MPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEI 233
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDML-EHKDFISWGTVICGL 119
+ + Y G + NA + MY KCG + + +F+ L ++ SW ++I L
Sbjct: 234 GRRLEGYARENG-FFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSL 292
Query: 120 AMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV-PQ 178
A +G EA+ LF+ ML +G +PD VTF+GLL C H G+V +G FK+M + + + P+
Sbjct: 293 ATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPK 352
Query: 179 MRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+ HYGCM+D+ GR G +EA ++ M ++ + +WG L
Sbjct: 353 LEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTL 391
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 64/125 (51%), Gaps = 1/125 (0%)
Query: 82 NALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLV-QGV 140
NA++ Y + GDM + +FD + K+ SW TVI G + NG+ EA+++F M + V
Sbjct: 152 NAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSV 211
Query: 141 QPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAEA 200
+P+ +T + +L C++ G + G R++ + ++MY + G+ + A+
Sbjct: 212 KPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKR 271
Query: 201 FLRAM 205
+
Sbjct: 272 LFEEL 276
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 118/219 (53%), Gaps = 6/219 (2%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M++R+V+SW +++ A V G F +M+ R P+E T
Sbjct: 174 MTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFC-PDETTMVVLLSACGGNLSLG- 231
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ VHS + R +L + +G AL++MY K G + +F+ + K+ +W +I GLA
Sbjct: 232 -KLVHSQVMVR-ELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLA 289
Query: 121 MNGHGKEAVQLFSLMLVQ-GVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV-PQ 178
G +EA+QLFS M+ + V+P+ VTF+G+LC CSH GLV +G +F M + + P
Sbjct: 290 QYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPM 349
Query: 179 MRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
M HYG MVD+ GRAG EA F++ M E + +W L
Sbjct: 350 MIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTL 388
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 84/211 (39%), Gaps = 7/211 (3%)
Query: 8 SWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWVHSY 67
+W L Y E++ V+ +M R +PN+ T + +
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKR-RGIKPNKLTFPFLLKACASFLGLTAGRQIQVE 138
Query: 68 IDTRG-DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGK 126
+ G D V +GN L+++Y C +FD + ++ +SW +++ L NG
Sbjct: 139 VLKHGFDFDV--YVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLN 196
Query: 127 EAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMV 186
+ F M+ + PD+ T + LL C G +S G + + L R +V
Sbjct: 197 LVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALV 254
Query: 187 DMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
DMY ++G E A M V+ W A+
Sbjct: 255 DMYAKSGGLEYARLVFERM-VDKNVWTWSAM 284
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 131 bits (330), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 121/222 (54%), Gaps = 6/222 (2%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREA--EPNEATXXXXXXXXXXXXX- 57
M DV+SWTT++ + + G +A+ VF +M+ A PNEAT
Sbjct: 178 MPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQG 237
Query: 58 -XXXXQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVI 116
+ +H Y+ ++ ++++ +G ALL+MY K GD+ M LTIFD + K +W +I
Sbjct: 238 GIRLGKQIHGYVMSK-EIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAII 296
Query: 117 CGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-L 175
LA NG K+A+++F +M V P+ +T + +L C+ LV G F ++ Y +
Sbjct: 297 SALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKI 356
Query: 176 VPQMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+P HYGC+VD+ GRAGL +A F++++ E + + GAL
Sbjct: 357 IPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGAL 398
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 5/122 (4%)
Query: 82 NALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQG-- 139
N+LL+ + G+M F + D +SW TVI G + G +A+ +F M+
Sbjct: 156 NSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERA 215
Query: 140 -VQPDDVTFIGLLCRCSH--KGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFE 196
+ P++ TF+ +L C++ +G + G + ++ ++DMYG+AG E
Sbjct: 216 VITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLE 275
Query: 197 EA 198
A
Sbjct: 276 MA 277
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 131 bits (329), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 109/217 (50%), Gaps = 2/217 (0%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +D++ W ++ YV+ EEA+ +F ++ RE P+E T
Sbjct: 515 MKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRE-RPDEFTFANMVTAAGNLASVQL 573
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
Q H + RG L I NALL+MY KCG FD +D + W +VI A
Sbjct: 574 GQEFHCQLLKRG-LECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYA 632
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
+G GK+A+Q+ M+ +G++P+ +TF+G+L CSH GLV +G F+ M + P+
Sbjct: 633 NHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETE 692
Query: 181 HYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HY CMV + GRAG +A + M + +W +L
Sbjct: 693 HYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSL 729
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 90/199 (45%), Gaps = 2/199 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ ++ ++WTT++ V+ G ++ +F Q+++ P+
Sbjct: 209 LPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLME-DNVVPDGYILSTVLSACSILPFLEG 267
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H++I R L + ++ N L++ YVKCG + +F+ + +K+ ISW T++ G
Sbjct: 268 GKQIHAHI-LRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYK 326
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
N KEA++LF+ M G++PD +L C+ + GT + L
Sbjct: 327 QNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSY 386
Query: 181 HYGCMVDMYGRAGLFEEAE 199
++DMY + +A
Sbjct: 387 VTNSLIDMYAKCDCLTDAR 405
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 72/169 (42%), Gaps = 27/169 (15%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +R+++SW+T+V A G EE++ VF + R+ PNE
Sbjct: 105 MPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQAC-------- 156
Query: 61 XQWVHSYIDTRGD---------LVVGG-----NIGNALLNMYVKCGDMHMGLTIFDMLEH 106
S +D RG LV G +G L++ Y+K G++ +FD L
Sbjct: 157 -----SGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPE 211
Query: 107 KDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCS 155
K ++W T+I G G ++QLF ++ V PD +L CS
Sbjct: 212 KSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACS 260
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 81/197 (41%), Gaps = 5/197 (2%)
Query: 5 DVISWTTLVMAYVRGG---HCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXX 61
DV+ + ++ Y R G EA+ +F+ M R P+ T
Sbjct: 415 DVVLFNAMIEGYSRLGTQWELHEALNIFRDM-RFRLIRPSLLTFVSLLRASASLTSLGLS 473
Query: 62 QWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAM 121
+ +H + G L + G+AL+++Y C + +FD ++ KD + W ++ G
Sbjct: 474 KQIHGLMFKYG-LNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQ 532
Query: 122 NGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRH 181
+EA+ LF + + +PD+ TF ++ + V G F + L
Sbjct: 533 QSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYI 592
Query: 182 YGCMVDMYGRAGLFEEA 198
++DMY + G E+A
Sbjct: 593 TNALLDMYAKCGSPEDA 609
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 69/154 (44%), Gaps = 5/154 (3%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +++ISWTTL+ Y + +EA+ +F M +P+
Sbjct: 310 MPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKF-GLKPDMYACSSILTSCASLHALGF 368
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
VH+Y + +L + N+L++MY KC + +FD+ D + + +I G +
Sbjct: 369 GTQVHAYT-IKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYS 427
Query: 121 MNGHG---KEAVQLFSLMLVQGVQPDDVTFIGLL 151
G EA+ +F M + ++P +TF+ LL
Sbjct: 428 RLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLL 461
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 131 bits (329), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 111/213 (52%), Gaps = 3/213 (1%)
Query: 6 VISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWVH 65
V+ + ++ Y R EA+++F++M + +PNE T +W+H
Sbjct: 195 VVCYNAMITGYARRNRPNEALSLFREM-QGKYLKPNEITLLSVLSSCALLGSLDLGKWIH 253
Query: 66 SYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHG 125
Y + + AL++M+ KCG + ++IF+ + +KD +W +I A +G
Sbjct: 254 KYA-KKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKA 312
Query: 126 KEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQMRHYGC 184
++++ +F M + VQPD++TF+GLL CSH G V EG +F M + +VP ++HYG
Sbjct: 313 EKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGS 372
Query: 185 MVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
MVD+ RAG E+A F+ + + +W L
Sbjct: 373 MVDLLSRAGNLEDAYEFIDKLPISPTPMLWRIL 405
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 62/135 (45%), Gaps = 1/135 (0%)
Query: 83 ALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQP 142
L+NMY +C D+ +FD + + + +I G A EA+ LF M + ++P
Sbjct: 169 TLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKP 228
Query: 143 DDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAEAFL 202
+++T + +L C+ G + G K + ++ ++DM+ + G ++A +
Sbjct: 229 NEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIF 288
Query: 203 RAMLVEAEGPIWGAL 217
M + + W A+
Sbjct: 289 EKMRYK-DTQAWSAM 302
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 130 bits (327), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 114/215 (53%), Gaps = 3/215 (1%)
Query: 4 RDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQW 63
+DV+SWT+++ + G+ EAV +F++MV+ + + A +
Sbjct: 550 KDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGRE- 608
Query: 64 VHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNG 123
+H Y+ +G + G+I A+++MY CGD+ +FD +E K + + ++I M+G
Sbjct: 609 IHCYLLRKG-FCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHG 667
Query: 124 HGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQMRHY 182
GK AV+LF M + V PD ++F+ LL CSH GL+ EG F K M Y L P HY
Sbjct: 668 CGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHY 727
Query: 183 GCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
C+VDM GRA EA F++ M E +W AL
Sbjct: 728 VCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCAL 762
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 6/152 (3%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +D+ISWTT++ Y + EA+ +F+ + R E +E
Sbjct: 447 MHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKR-MEIDEMILGSILRASSVLKSMLI 505
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H +I +G ++ I N L+++Y KC +M +F+ ++ KD +SW ++I A
Sbjct: 506 VKEIHCHILRKG--LLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSA 563
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLC 152
+NG+ EAV+LF M+ G+ D V LLC
Sbjct: 564 LNGNESEAVELFRRMVETGLSADSV---ALLC 592
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 90/220 (40%), Gaps = 7/220 (3%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEP-NEATXXXXXXXXXXXXXXX 59
M R +W T++ AYV G A+A++ M E P ++
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMR--VEGVPLGLSSFPALLKACAKLRDIR 199
Query: 60 XXQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHK-DFISWGTVICG 118
+HS + G G I NAL++MY K D+ +FD + K D + W +++
Sbjct: 200 SGSELHSLLVKLG-YHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSS 258
Query: 119 LAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGT-MFFKAMRDSYLVP 177
+ +G E ++LF M + G P+ T + L C G + ++ S
Sbjct: 259 YSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSS 318
Query: 178 QMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
++ ++ MY R G +AE LR M A+ W +L
Sbjct: 319 ELYVCNALIAMYTRCGKMPQAERILRQM-NNADVVTWNSL 357
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 1/147 (0%)
Query: 5 DVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWV 64
D + W +++ +Y G E + +F++M A PN T + +
Sbjct: 248 DAVLWNSILSSYSTSGKSLETLELFREMHMTGPA-PNSYTIVSALTACDGFSYAKLGKEI 306
Query: 65 HSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGH 124
H+ + + NAL+ MY +CG M I + + D ++W ++I G N
Sbjct: 307 HASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLM 366
Query: 125 GKEAVQLFSLMLVQGVQPDDVTFIGLL 151
KEA++ FS M+ G + D+V+ ++
Sbjct: 367 YKEALEFFSDMIAAGHKSDEVSMTSII 393
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 5/156 (3%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M+ DV++W +L+ YV+ +EA+ F M+ + +E +
Sbjct: 346 MNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGH-KSDEVSMTSIIAASGRLSNLLA 404
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCG-DMHMGLTIFDMLEHKDFISWGTVICGL 119
+H+Y+ G +GN L++MY KC +MG M + KD ISW TVI G
Sbjct: 405 GMELHAYVIKHG-WDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHD-KDLISWTTVIAGY 462
Query: 120 AMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCS 155
A N EA++LF + + ++ D++ +G + R S
Sbjct: 463 AQNDCHVEALELFRDVAKKRMEIDEM-ILGSILRAS 497
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 130 bits (327), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 115/217 (52%), Gaps = 6/217 (2%)
Query: 4 RDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREA--EPNEATXXXXXXXXXXXXXXXXX 61
+D++ + +V + R G E A + + A PN +T
Sbjct: 235 KDIVVYNAMVEGFSRSG--ETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVG 292
Query: 62 QWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAM 121
Q VH+ I G + +G++LL+MY KCG ++ +FD ++ K+ SW ++I G
Sbjct: 293 QQVHAQIMKSG-VYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGK 351
Query: 122 NGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAM-RDSYLVPQMR 180
NG+ +EA++LF+ M ++P+ VTF+G L CSH GLV +G F++M RD + P+M
Sbjct: 352 NGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKME 411
Query: 181 HYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HY C+VD+ GRAG +A F RAM + IW AL
Sbjct: 412 HYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAAL 448
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 130 bits (326), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 116/219 (52%), Gaps = 5/219 (2%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M RD++SW ++ + G +A++++K+M + + T
Sbjct: 168 MPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGN-EGVCGDSYTLVALLSSCAHVSALNM 226
Query: 61 XQWVHSYI-DTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGL 119
+H D R + V + NAL++MY KCG + + +F+ + +D ++W ++I G
Sbjct: 227 GVMLHRIACDIRCESCVF--VSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGY 284
Query: 120 AMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQ 178
++GHG EA+ F M+ GV+P+ +TF+GLL CSH+GLV EG F+ M + L P
Sbjct: 285 GVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPN 344
Query: 179 MRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
++HYGCMVD+YGRAG E + + A + +W L
Sbjct: 345 VKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTL 383
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/197 (19%), Positives = 75/197 (38%), Gaps = 1/197 (0%)
Query: 9 WTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWVHSYI 68
W L+ + ++ + +M+ + P+ T +H +
Sbjct: 74 WNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSV 133
Query: 69 DTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEA 128
R + + +L+ Y G + + +FD + +D +SW +IC + G +A
Sbjct: 134 -IRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQA 192
Query: 129 VQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDM 188
+ ++ M +GV D T + LL C+H ++ G M + D + ++DM
Sbjct: 193 LSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDM 252
Query: 189 YGRAGLFEEAEAFLRAM 205
Y + G E A M
Sbjct: 253 YAKCGSLENAIGVFNGM 269
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 115/220 (52%), Gaps = 11/220 (5%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
MS+++ +SW+ L+ Y + G E+A+ +F++M E +
Sbjct: 326 MSKKNSVSWSALLGGYCQNGEHEKAIEIFREM-----EEKDLYCFGTVLKACAGLAAVRL 380
Query: 61 XQWVHSYIDTRGDLVVGGNI--GNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICG 118
+ +H RG GN+ +AL+++Y K G + ++ + ++ I+W ++
Sbjct: 381 GKEIHGQYVRRGCF---GNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSA 437
Query: 119 LAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVP 177
LA NG G+EAV F+ M+ +G++PD ++FI +L C H G+V EG +F M SY + P
Sbjct: 438 LAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKP 497
Query: 178 QMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HY CM+D+ GRAGLFEEAE L + +WG L
Sbjct: 498 GTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVL 537
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 95/219 (43%), Gaps = 27/219 (12%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M + DVI WT ++ A+ + EEA+ +F M + P+ +T
Sbjct: 224 MPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQ 283
Query: 61 XQWVHSYIDTRGDLVVGGNI--GNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICG 118
+ +H + T G +G N+ ++LL+MY KCG + +F+ + K+ +SW ++ G
Sbjct: 284 GKEIHGKLITNG---IGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGG 340
Query: 119 LAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQ 178
NG ++A+++F M + D F +L C+ V G K + Y+
Sbjct: 341 YCQNGEHEKAIEIFREM----EEKDLYCFGTVLKACAGLAAVRLG----KEIHGQYV--- 389
Query: 179 MRHYGC---------MVDMYGRAGLFEEAEAFLRAMLVE 208
GC ++D+YG++G + A M +
Sbjct: 390 --RRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIR 426
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 86/215 (40%), Gaps = 4/215 (1%)
Query: 4 RDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQW 63
+D ISWT+++ YV G +A+ VF +MV + NE T +
Sbjct: 126 KDAISWTSMMSGYVTGKEHVKALEVFVEMVSF-GLDANEFTLSSAVKACSELGEVRLGRC 184
Query: 64 VHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNG 123
H + T G I + L +Y + +FD + D I W V+ + N
Sbjct: 185 FHGVVITHG-FEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKND 243
Query: 124 HGKEAVQLFSLMLV-QGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHY 182
+EA+ LF M +G+ PD TF +L C + + +G + + + +
Sbjct: 244 LYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVE 303
Query: 183 GCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
++DMYG+ G EA M + W AL
Sbjct: 304 SSLLDMYGKCGSVREARQVFNGM-SKKNSVSWSAL 337
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 110/218 (50%), Gaps = 3/218 (1%)
Query: 2 SQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXX 61
S++D+++W +++ + + G EA+ +F +M + PN T
Sbjct: 404 SEKDIVAWNSIISGFSQNGSIHEALFLFHRM-NSESVTPNGVTVASLFSACASLGSLAVG 462
Query: 62 QWVHSYIDTRGDLVVGG-NIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+H+Y G L ++G ALL+ Y KCGD IFD +E K+ I+W +I G
Sbjct: 463 SSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYG 522
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAM-RDSYLVPQM 179
G +++LF ML + +P++ TF +L C H G+V+EG +F +M +D P
Sbjct: 523 KQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPST 582
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+HY CMVDM RAG E+A + M ++ + +GA
Sbjct: 583 KHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAF 620
Score = 83.6 bits (205), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 6/218 (2%)
Query: 2 SQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXX 61
S D++ WT +++ Y G EA+++F++M E +PN T
Sbjct: 304 SHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGV-EIKPNCVTIASVLSGCGLIENLELG 362
Query: 62 QWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAM 121
+ VH G + N+ NAL++MY KC +F+M KD ++W ++I G +
Sbjct: 363 RSVHGLSIKVG--IWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQ 420
Query: 122 NGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFK-AMRDSYLVPQMR 180
NG EA+ LF M + V P+ VT L C+ G ++ G+ +++ +L
Sbjct: 421 NGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSV 480
Query: 181 HYG-CMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
H G ++D Y + G + A + E W A+
Sbjct: 481 HVGTALLDFYAKCGDPQSARLIFDT-IEEKNTITWSAM 517
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 2/154 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
++ R+V+ WT+++ YV+ CEE + +F +M + NE T
Sbjct: 202 ITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRE-NNVLGNEYTYGTLIMACTKLSALHQ 260
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+W H + G + + + +LL+MYVKCGD+ +F+ H D + W +I G
Sbjct: 261 GKWFHGCLVKSG-IELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYT 319
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRC 154
NG EA+ LF M ++P+ VT +L C
Sbjct: 320 HNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGC 353
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 118/223 (52%), Gaps = 11/223 (4%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ +D ++WT ++ V+ EA ++ MV C +P +T
Sbjct: 426 LHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRC-GLKPLNSTYSVLLSSAGATSNLDQ 484
Query: 61 XQWVHSYIDTRG-----DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTV 115
+ +H I DL+ + N+L++MY KCG + IF + KD +SW ++
Sbjct: 485 GKHIHCVIAKTTACYDPDLI----LQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSM 540
Query: 116 ICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYL 175
I GL+ +G +A+ LF ML G +P+ VTF+G+L CSH GL++ G FKAM+++Y
Sbjct: 541 IMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYS 600
Query: 176 V-PQMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+ P + HY M+D+ GRAG +EAE F+ A+ + ++GAL
Sbjct: 601 IQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGAL 643
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 62/137 (45%), Gaps = 3/137 (2%)
Query: 83 ALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQP 142
++++ Y++ GD+ +F L KD ++W +I GL N EA L S M+ G++P
Sbjct: 405 SMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKP 464
Query: 143 DDVTFIGLLCRCSHKGLVSEGTMF--FKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAEA 200
+ T+ LL + +G A + P + +V MY + G E+A
Sbjct: 465 LNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYE 524
Query: 201 FLRAMLVEAEGPIWGAL 217
A +V+ + W ++
Sbjct: 525 IF-AKMVQKDTVSWNSM 540
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 118/219 (53%), Gaps = 7/219 (3%)
Query: 2 SQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXX 61
++ D +S T +++ + G EEA+ F +M+ E +
Sbjct: 318 TEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQA-GVEIDANVVSAVLGVSFIDNSLGLG 376
Query: 62 QWVHSYIDTRGDLVVGGN--IGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGL 119
+ +HS + R GN + N L+NMY KCGD+ T+F + ++++SW ++I
Sbjct: 377 KQLHSLVIKRK---FSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAF 433
Query: 120 AMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQ 178
A +GHG A++L+ M V+P DVTF+ LL CSH GL+ +G M++ + + P+
Sbjct: 434 ARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPR 493
Query: 179 MRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HY C++DM GRAGL +EA++F+ ++ ++ + IW AL
Sbjct: 494 TEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQAL 532
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 5/199 (2%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M RDVIS + ++R E + K+M+ + AT
Sbjct: 116 MPMRDVISQNIVFYGFLRNRETESGFVLLKRMLG--SGGFDHATLTIVLSVCDTPEFCLV 173
Query: 61 XQWVHSYIDTRG-DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGL 119
+ +H+ G D + ++GN L+ Y KCG G +FD + H++ I+ VI GL
Sbjct: 174 TKMIHALAILSGYDKEI--SVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGL 231
Query: 120 AMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQM 179
N ++ ++LFSLM V P+ VT++ L CS + EG + + ++
Sbjct: 232 IENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESEL 291
Query: 180 RHYGCMVDMYGRAGLFEEA 198
++DMY + G E+A
Sbjct: 292 CIESALMDMYSKCGSIEDA 310
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 66/145 (45%), Gaps = 6/145 (4%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCRE--AEPNEATXXXXXXXXXXXXXX 58
MS R+VI+ T ++ + E+ + +F M R PN T
Sbjct: 216 MSHRNVITLTAVISGLIENELHEDGLRLFSLM---RRGLVHPNSVTYLSALAACSGSQRI 272
Query: 59 XXXQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICG 118
Q +H+ + G + I +AL++MY KCG + TIF+ D +S ++ G
Sbjct: 273 VEGQQIHALLWKYG-IESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVG 331
Query: 119 LAMNGHGKEAVQLFSLMLVQGVQPD 143
LA NG +EA+Q F ML GV+ D
Sbjct: 332 LAQNGSEEEAIQFFIRMLQAGVEID 356
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 128 bits (322), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 110/216 (50%), Gaps = 3/216 (1%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
++ +SW ++ Y+ G EEAVA F+QM + +PN T
Sbjct: 566 EKSTVSWNIMMNGYLLHGQAEEAVATFRQM-KVEKFQPNAVTFVNIVRAAAELSALRVGM 624
Query: 63 WVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMN 122
VHS + G +GN+L++MY KCG + F + +K +SW T++ A +
Sbjct: 625 SVHSSLIQCG-FCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAH 683
Query: 123 GHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV-PQMRH 181
G AV LF M ++PD V+F+ +L C H GLV EG F+ M + + + ++ H
Sbjct: 684 GLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEH 743
Query: 182 YGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
Y CMVD+ G+AGLF EA +R M V+ +WGAL
Sbjct: 744 YACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGAL 779
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 73/155 (47%), Gaps = 2/155 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ RDV+SW+ ++ +Y + G +EA+++F+ M+ +PN T
Sbjct: 361 IEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRI-HIKPNAVTLTSVLQGCAGVAASRL 419
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H Y + D+ A+++MY KCG L F+ L KD +++ + G
Sbjct: 420 GKSIHCYA-IKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYT 478
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCS 155
G +A ++ M + GV PD T +G+L C+
Sbjct: 479 QIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCA 513
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 88/209 (42%), Gaps = 20/209 (9%)
Query: 2 SQRD--VISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXX 59
S RD V+ W +++ Y R G EA+ F M + + +P++ +
Sbjct: 58 SVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFK 117
Query: 60 XXQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGL 119
+H I G L IG AL+ MY K D+ +FD + KD ++W T++ GL
Sbjct: 118 KGLRIHDLIAEMG-LESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGL 176
Query: 120 AMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLL-----------CRCSHKGLVSEGTMFFK 168
A NG A+ LF M V D V+ L+ CRC H ++ +G +F
Sbjct: 177 AQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIF-- 234
Query: 169 AMRDSYLVPQMRHYGCMVDMYGRAGLFEE 197
++ + Y D+Y +FEE
Sbjct: 235 ----AFSSGLIDMYCNCADLYAAESVFEE 259
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 91/208 (43%), Gaps = 3/208 (1%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
++D SW T++ AY G EE + +F M + + N+
Sbjct: 262 RKDESSWGTMMAAYAHNGFFEEVLELFDLMRN-YDVRMNKVAAASALQAAAYVGDLVKGI 320
Query: 63 WVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMN 122
+H Y +G L+ ++ +L++MY KCG++ + +F +E +D +SW +I
Sbjct: 321 AIHDYAVQQG-LIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQA 379
Query: 123 GHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHY 182
G EA+ LF M+ ++P+ VT +L C+ G + + ++
Sbjct: 380 GQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETA 439
Query: 183 GCMVDMYGRAGLFEEA-EAFLRAMLVEA 209
++ MY + G F A +AF R + +A
Sbjct: 440 TAVISMYAKCGRFSPALKAFERLPIKDA 467
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 82/197 (41%), Gaps = 3/197 (1%)
Query: 4 RDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQW 63
+D +++ L Y + G +A V+K M P+ T
Sbjct: 465 KDAVAFNALAQGYTQIGDANKAFDVYKNM-KLHGVCPDSRTMVGMLQTCAFCSDYARGSC 523
Query: 64 VHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLE-HKDFISWGTVICGLAMN 122
V+ I G ++ +AL+NM+ KC + + +FD K +SW ++ G ++
Sbjct: 524 VYGQIIKHG-FDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLH 582
Query: 123 GHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHY 182
G +EAV F M V+ QP+ VTF+ ++ + + G ++ Q
Sbjct: 583 GQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVG 642
Query: 183 GCMVDMYGRAGLFEEAE 199
+VDMY + G+ E +E
Sbjct: 643 NSLVDMYAKCGMIESSE 659
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 85/199 (42%), Gaps = 4/199 (2%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +DV++W T+V + G A+ +F M C + + +
Sbjct: 161 MHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCC-VDIDHVSLYNLIPAVSKLEKSDV 219
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H + +G + + L++MY C D++ ++F+ + KD SWGT++ A
Sbjct: 220 CRCLHGLVIKKGFIFA---FSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYA 276
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
NG +E ++LF LM V+ + V L ++ G + +G L+ +
Sbjct: 277 HNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVS 336
Query: 181 HYGCMVDMYGRAGLFEEAE 199
++ MY + G E AE
Sbjct: 337 VATSLMSMYSKCGELEIAE 355
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 111/218 (50%), Gaps = 3/218 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M RD +W ++ AY R G EA+ +F QM + P+ +
Sbjct: 291 MEDRDNATWRGMIKAYERKGFELEALDLFAQMQK-QGVRPSFPSLISILSVCATLASLQY 349
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ VH+++ R + + L+ MYVKCG++ +FD KD I W ++I G A
Sbjct: 350 GRQVHAHL-VRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYA 408
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV-PQM 179
+G G+EA+++F M G P+ VT I +L CS+ G + EG F++M + V P +
Sbjct: 409 SHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTV 468
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HY C VDM GRAG ++A + +M ++ + +WGAL
Sbjct: 469 EHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGAL 506
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 75/170 (44%), Gaps = 14/170 (8%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +R+V+SWT +V Y++ G EA ++F +M E NE +
Sbjct: 105 MPERNVVSWTAMVKGYMQEGMVGEAESLFWRM-----PERNEVSWTVMFGGLIDDGRIDK 159
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ ++ + + D+V N+ L + G + IFD + ++ ++W T+I G
Sbjct: 160 ARKLYDMMPVK-DVVASTNMIGGL----CREGRVDEARLIFDEMRERNVVTWTTMITGYR 214
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAM 170
N A +LF +M + +V++ +L + G + + FF+ M
Sbjct: 215 QNNRVDVARKLFEVM----PEKTEVSWTSMLLGYTLSGRIEDAEEFFEVM 260
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 128 bits (321), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 114/219 (52%), Gaps = 4/219 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +R+ SW T++ + R G EA+ +F M + P T
Sbjct: 291 MKERNDASWQTVIKIHERNGFELEALDLFILMQK-QGVRPTFPTLISILSVCASLASLHH 349
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ VH+ + R V + + L+ MY+KCG++ IFD KD I W ++I G A
Sbjct: 350 GKQVHAQL-VRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYA 408
Query: 121 MNGHGKEAVQLFSLMLVQG-VQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV-PQ 178
+G G+EA+++F M + G +P++VTF+ L CS+ G+V EG +++M + V P
Sbjct: 409 SHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPI 468
Query: 179 MRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HY CMVDM GRAG F EA + +M VE + +WG+L
Sbjct: 469 TAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSL 507
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 128 bits (321), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 118/218 (54%), Gaps = 5/218 (2%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
++DV++W ++ Y + G EE V + +QM + +PN +T +
Sbjct: 290 RKDVVTWNCMIDQYAKTGLLEECVWLLRQM-KYEKMKPNSSTFVGLLSSCAYSEAAFVGR 348
Query: 63 WVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMN 122
V ++ + + +G AL++MY K G + + IF+ ++ KD SW +I G +
Sbjct: 349 TVADLLEEE-RIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAH 407
Query: 123 GHGKEAVQLFSLMLVQG--VQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQM 179
G +EAV LF+ M + V+P+++TF+ +L CSH GLV EG FK M ++Y P++
Sbjct: 408 GLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKV 467
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HYGC+VD+ GRAG EEA +R + + ++ W AL
Sbjct: 468 EHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRAL 505
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Query: 82 NALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQ 141
AL+ MY K G + IFD KD ++W +I A G +E V L M + ++
Sbjct: 266 TALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMK 325
Query: 142 PDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEA-EA 200
P+ TF+GLL C++ G + + + +VDMY + GL E+A E
Sbjct: 326 PNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEI 385
Query: 201 FLR 203
F R
Sbjct: 386 FNR 388
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 128 bits (321), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 113/215 (52%), Gaps = 7/215 (3%)
Query: 5 DVISWTTLVMAYVRGGHCEEAVAVFKQMVDC-REAEPNEATXXXXXXXXXXXXXXXXXQW 63
D I W +++ + + + A+ +FK+M AE T
Sbjct: 224 DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAH 283
Query: 64 VHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNG 123
VH + DL+ + NAL++MY KCG + L +F+ ++ +D I+W T+I GLA NG
Sbjct: 284 VH-IVKYDQDLI----LNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNG 338
Query: 124 HGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQMRHY 182
+ +EA++LF M G +P+ +T +G+L CSH GL+ +G +F++M+ Y + P HY
Sbjct: 339 YSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHY 398
Query: 183 GCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
GCM+D+ G+AG ++A L M E + W L
Sbjct: 399 GCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTL 433
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 87/202 (43%), Gaps = 15/202 (7%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M QR+VISWTT++ AY + ++A+ + M+ PN T
Sbjct: 122 MPQRNVISWTTMISAYSKCKIHQKALELLVLMLR-DNVRPNVYTYSSVLRSCNGMSDV-- 178
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H I G L + +AL++++ K G+ L++FD + D I W ++I G A
Sbjct: 179 -RMLHCGIIKEG-LESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFA 236
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTM----FFKAMRDSYLV 176
N A++LF M G + T +L C+ L+ G K +D L
Sbjct: 237 QNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLIL- 295
Query: 177 PQMRHYGCMVDMYGRAGLFEEA 198
+VDMY + G E+A
Sbjct: 296 -----NNALVDMYCKCGSLEDA 312
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 20/144 (13%)
Query: 82 NALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQ 141
N L+NMYVK ++ +FD + ++ ISW T+I + ++A++L LML V+
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159
Query: 142 PDDVTFIGLLCRCS--------HKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAG 193
P+ T+ +L C+ H G++ EG +R + ++D++ + G
Sbjct: 160 PNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSA-----------LIDVFAKLG 208
Query: 194 LFEEAEAFLRAMLVEAEGPIWGAL 217
E+A + M V + +W ++
Sbjct: 209 EPEDALSVFDEM-VTGDAIVWNSI 231
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 127 bits (320), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 118/215 (54%), Gaps = 3/215 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+S+++++S+ T + R + E+A + ++ + RE + T
Sbjct: 434 LSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITE-RELGVSAFTFASLLSGVANVGSIRK 492
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +HS + G L + NAL++MY KCG + +F+ +E+++ ISW ++I G A
Sbjct: 493 GEQIHSQVVKLG-LSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFA 551
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAM-RDSYLVPQM 179
+G ++ F+ M+ +GV+P++VT++ +L CSH GLVSEG F +M D + P+M
Sbjct: 552 KHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKM 611
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIW 214
HY CMVD+ RAGL +A F+ M +A+ +W
Sbjct: 612 EHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVW 646
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 9/159 (5%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
MS+ +V++WT ++ ++ G EA+ F MV E ++ T
Sbjct: 229 MSELNVVTWTLMITRCMQMGFPREAIRFFLDMV-LSGFESDKFTLSSVFSACAELENLSL 287
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKC---GDMHMGLTIFDMLEHKDFISWGTVIC 117
+ +HS+ R LV ++ +L++MY KC G + +FD +E +SW +I
Sbjct: 288 GKQLHSWA-IRSGLV--DDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALIT 344
Query: 118 GLAMNGH-GKEAVQLFSLMLVQG-VQPDDVTFIGLLCRC 154
G N + EA+ LFS M+ QG V+P+ TF C
Sbjct: 345 GYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKAC 383
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 77/190 (40%), Gaps = 4/190 (2%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
+RDV+SW+ ++ Y G +A+ VF + ++ PN+ +
Sbjct: 128 KRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLV-PNDYCYTAVIRACSNSDFVGVGR 186
Query: 63 WVHSYIDTRGDLVVGGNIGNALLNMYVKC-GDMHMGLTIFDMLEHKDFISWGTVICGLAM 121
++ G +G +L++M+VK +FD + + ++W +I
Sbjct: 187 VTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQ 246
Query: 122 NGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRH 181
G +EA++ F M++ G + D T + C+ +S G S LV +
Sbjct: 247 MGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVE- 305
Query: 182 YGCMVDMYGR 191
+VDMY +
Sbjct: 306 -CSLVDMYAK 314
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 127 bits (320), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 113/216 (52%), Gaps = 3/216 (1%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
++DV+SWT+++ Y + E ++F ++V E PNE T +
Sbjct: 281 EKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCE-RPNEYTFAGVLNACADLTTEELGK 339
Query: 63 WVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMN 122
VH Y+ TR ++L++MY KCG++ + D D +SW ++I G A N
Sbjct: 340 QVHGYM-TRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQN 398
Query: 123 GHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR-H 181
G EA++ F L+L G +PD VTF+ +L C+H GLV +G FF ++ + + + H
Sbjct: 399 GQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDH 458
Query: 182 YGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
Y C+VD+ R+G FE+ ++ + M ++ +W ++
Sbjct: 459 YTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASV 494
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 87/199 (43%), Gaps = 1/199 (0%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M+++D SWT +V YV+ EEA+ ++ M + PN T
Sbjct: 177 MTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRR 236
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H +I R L + ++L++MY KCG + IFD + KD +SW ++I
Sbjct: 237 GKEIHGHI-VRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYF 295
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
+ +E LFS ++ +P++ TF G+L C+ G M P
Sbjct: 296 KSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSF 355
Query: 181 HYGCMVDMYGRAGLFEEAE 199
+VDMY + G E A+
Sbjct: 356 ASSSLVDMYTKCGNIESAK 374
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 8/117 (6%)
Query: 64 VHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNG 123
VH +I T G V G I N LL MY KCG + +FD + ++D SW ++ G A G
Sbjct: 107 VHEHIRTSG-FVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVG 165
Query: 124 HGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
+EA +LF M + D ++ ++ K E + + M+ VP R
Sbjct: 166 LLEEARKLFDEM----TEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQR---VPNSR 215
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 127 bits (320), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 111/219 (50%), Gaps = 3/219 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ Q DV+ W L+ YVR G E + VFK+M+ R EP+E +
Sbjct: 178 IPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEML-VRGIEPDEFSVTTALTACAQVGALAQ 236
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+W+H ++ + + +G AL++MY KCG + + +F+ L ++ SW +I G A
Sbjct: 237 GKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYA 296
Query: 121 MNGHGKEAVQ-LFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQ 178
G+ K+A L + G++PD V +G+L C+H G + EG + M Y + P+
Sbjct: 297 AYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPK 356
Query: 179 MRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HY C+VD+ RAG ++A + M ++ +WGAL
Sbjct: 357 HEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGAL 395
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 66/136 (48%), Gaps = 1/136 (0%)
Query: 64 VHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNG 123
+H ++ G + G++ +L +YV+ + +FD + D + W ++ G G
Sbjct: 138 IHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCG 197
Query: 124 HGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYG 183
G E +++F MLV+G++PD+ + L C+ G +++G + ++ + G
Sbjct: 198 LGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVG 257
Query: 184 -CMVDMYGRAGLFEEA 198
+VDMY + G E A
Sbjct: 258 TALVDMYAKCGCIETA 273
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 127 bits (318), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 118/225 (52%), Gaps = 8/225 (3%)
Query: 1 MSQRDVISWTTLVMAYV----RGGH-CEEAVAVFKQMVDCREA-EPNEATXXXXXXXXXX 54
M +R ++W ++ Y +G H +A+ +F++ C P + T
Sbjct: 173 MPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQ 232
Query: 55 XXXXXXXQWVHSYIDTRG-DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWG 113
VH YI+ G V IG AL++MY KCG ++ ++F++++ K+ +W
Sbjct: 233 TGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWT 292
Query: 114 TVICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDS 173
++ GLA+NG G E L + M G++P+++TF LL H GLV EG FK+M+
Sbjct: 293 SMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTR 352
Query: 174 Y-LVPQMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+ + P + HYGC+VD+ G+AG +EA F+ AM ++ + + +L
Sbjct: 353 FGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSL 397
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 9/154 (5%)
Query: 64 VHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAM-- 121
VH + G L IG LL+ Y K GD+ +FD + + ++W +I G
Sbjct: 133 VHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHK 192
Query: 122 ---NGHGKEAVQLFSLMLV--QGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV 176
N + ++A+ LF GV+P D T + +L S GL+ G++ +
Sbjct: 193 DKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFT 252
Query: 177 PQMRHY--GCMVDMYGRAGLFEEAEAFLRAMLVE 208
P++ + +VDMY + G A + M V+
Sbjct: 253 PEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVK 286
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 127 bits (318), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 117/223 (52%), Gaps = 9/223 (4%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
+++++ WT ++ AY + EA+ +FK+M + + E + +
Sbjct: 129 KQNIVLWTAMISAYTENENSVEAIELFKRM-EAEKIELDGVIVTVALSACADLGAVQMGE 187
Query: 63 WVHSY-IDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAM 121
++S I + L + + N+LLNMYVK G+ +FD KD ++ ++I G A+
Sbjct: 188 EIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYAL 247
Query: 122 NGHGKEAVQLFSLMLV------QGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAM-RDSY 174
NG +E+++LF M + P+DVTFIG+L CSH GLV EG FK+M D
Sbjct: 248 NGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYN 307
Query: 175 LVPQMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
L P+ H+GCMVD++ R+G ++A F+ M ++ IW L
Sbjct: 308 LKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTL 350
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 112/218 (51%), Gaps = 3/218 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M + +I+W ++ Y + G + + +++QM P+ T
Sbjct: 217 MPVKGLITWNAVISGYSQNGLAYDVLELYEQM-KSSGVCPDPFTLVSVLSSCAHLGAKKI 275
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
V +++ G V + NA ++MY +CG++ +FD++ K +SW +I
Sbjct: 276 GHEVGKLVESNG-FVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYG 334
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQM 179
M+G G+ + LF M+ +G++PD F+ +L CSH GL +G F+AM+ Y L P
Sbjct: 335 MHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGP 394
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HY C+VD+ GRAG +EA F+ +M VE +G +WGAL
Sbjct: 395 EHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGAL 432
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 62/128 (48%)
Query: 82 NALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQ 141
N+ + MY+KCG + G +FD + K I+W VI G + NG + ++L+ M GV
Sbjct: 195 NSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVC 254
Query: 142 PDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAEAF 201
PD T + +L C+H G G K + + VP + + MY R G +A A
Sbjct: 255 PDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAV 314
Query: 202 LRAMLVEA 209
M V++
Sbjct: 315 FDIMPVKS 322
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 111/219 (50%), Gaps = 3/219 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ Q DV+ W L+ YVR G E + VF++M+ + EP+E +
Sbjct: 178 IPQPDVVKWDVLMNGYVRCGLGSEGLEVFREML-VKGLEPDEFSVTTALTACAQVGALAQ 236
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+W+H ++ + + +G AL++MY KCG + + +F L ++ SW +I G A
Sbjct: 237 GKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYA 296
Query: 121 MNGHGKEAVQ-LFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQ 178
G+ K+A+ L L G++PD V +G+L C+H G + EG + M Y + P+
Sbjct: 297 AYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPK 356
Query: 179 MRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HY C+VD+ RAG ++A + M ++ +WGAL
Sbjct: 357 HEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGAL 395
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 67/143 (46%), Gaps = 1/143 (0%)
Query: 64 VHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNG 123
+H ++ G + ++ +L +YV+ + +FD + D + W ++ G G
Sbjct: 138 IHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCG 197
Query: 124 HGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYG 183
G E +++F MLV+G++PD+ + L C+ G +++G + ++ + G
Sbjct: 198 LGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVG 257
Query: 184 -CMVDMYGRAGLFEEAEAFLRAM 205
+VDMY + G E A + +
Sbjct: 258 TALVDMYAKCGCIETAVEVFKKL 280
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 125 bits (315), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 112/218 (51%), Gaps = 3/218 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ + D +S ++L+ Y + G ++ +F+ MV + A
Sbjct: 612 LPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLG 671
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
Q VH+YI T+ L ++G++LL MY K G + F + D I+W +I A
Sbjct: 672 AQ-VHAYI-TKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYA 729
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQM 179
+G EA+Q+++LM +G +PD VTF+G+L CSH GLV E +M Y + P+
Sbjct: 730 QHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPEN 789
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
RHY CMVD GR+G EAE+F+ M ++ + +WG L
Sbjct: 790 RHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTL 827
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 2/148 (1%)
Query: 4 RDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQW 63
+D W +++ + G+ EA+ +F +M+D P+E+T +
Sbjct: 514 KDNACWASMISGFNEYGYLREAIGLFSEMLD-DGTSPDESTLAAVLTVCSSHPSLPRGKE 572
Query: 64 VHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNG 123
+H Y R + G ++G+AL+NMY KCG + + ++D L D +S ++I G + +G
Sbjct: 573 IHGYT-LRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHG 631
Query: 124 HGKEAVQLFSLMLVQGVQPDDVTFIGLL 151
++ LF M++ G D +L
Sbjct: 632 LIQDGFLLFRDMVMSGFTMDSFAISSIL 659
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 1/132 (0%)
Query: 62 QWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAM 121
+ VH Y G LV+ +G++L +Y KCG + +F + KD W ++I G
Sbjct: 470 KQVHGYTLKSG-LVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNE 528
Query: 122 NGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRH 181
G+ +EA+ LFS ML G PD+ T +L CS + G + + M
Sbjct: 529 YGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDL 588
Query: 182 YGCMVDMYGRAG 193
+V+MY + G
Sbjct: 589 GSALVNMYSKCG 600
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 70/150 (46%), Gaps = 7/150 (4%)
Query: 5 DVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWV 64
V+SWT ++ Y + A+ +FK+M E N T V
Sbjct: 315 SVVSWTVMLSGYTKSNDAFSALEIFKEMRH-SGVEINNCTVTSVISACGRPSMVCEASQV 373
Query: 65 HSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIF---DMLEHKDFISWGTVICGLAM 121
H+++ G + ++ AL++MY K GD+ + +F D ++ ++ ++ +I +
Sbjct: 374 HAWVFKSG-FYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVN--VMITSFSQ 430
Query: 122 NGHGKEAVQLFSLMLVQGVQPDDVTFIGLL 151
+ +A++LF+ ML +G++ D+ + LL
Sbjct: 431 SKKPGKAIRLFTRMLQEGLRTDEFSVCSLL 460
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/120 (20%), Positives = 54/120 (45%)
Query: 80 IGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQG 139
+ A++++Y KCG M + +F + + +SW ++ G + A+++F M G
Sbjct: 287 VCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSG 346
Query: 140 VQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAE 199
V+ ++ T ++ C +V E + + S ++ MY ++G + +E
Sbjct: 347 VEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSE 406
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 111/218 (50%), Gaps = 3/218 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ R ++SW +++ + + G +A+ F QM R +P+ T
Sbjct: 398 LQSRTLVSWNAMILGFAQNGRPIDALNYFSQM-RSRTVKPDTFTYVSVITAIAELSITHH 456
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+W+H + R L + AL++MY KCG + + IFDM+ + +W +I G
Sbjct: 457 AKWIHGVV-MRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYG 515
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVP-QM 179
+G GK A++LF M ++P+ VTF+ ++ CSH GLV G F M+++Y + M
Sbjct: 516 THGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSM 575
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HYG MVD+ GRAG EA F+ M V+ ++GA+
Sbjct: 576 DHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAM 613
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 6/170 (3%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREA-EPNEATXXXXXXXXXXXXXXX 59
M +RD++SW T+V Y + G A+ + K M C E +P+ T
Sbjct: 196 MPERDLVSWNTIVAGYSQNGMARMALEMVKSM--CEENLKPSFITIVSVLPAVSALRLIS 253
Query: 60 XXQWVHSYIDTRG-DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICG 118
+ +H Y G D +V NI AL++MY KCG + +FD + ++ +SW ++I
Sbjct: 254 VGKEIHGYAMRSGFDSLV--NISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDA 311
Query: 119 LAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFK 168
N + KEA+ +F ML +GV+P DV+ +G L C+ G + G K
Sbjct: 312 YVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHK 361
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 102/217 (47%), Gaps = 3/217 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +R+V+SW +++ AYV+ + +EA+ +F++M+D +P + +
Sbjct: 297 MLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLD-EGVKPTDVSVMGALHACADLGDLER 355
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+++H + L ++ N+L++MY KC ++ ++F L+ + +SW +I G A
Sbjct: 356 GRFIHK-LSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFA 414
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
NG +A+ FS M + V+PD T++ ++ + + + S L +
Sbjct: 415 QNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVF 474
Query: 181 HYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+VDMY + G A + M+ E W A+
Sbjct: 475 VTTALVDMYAKCGAIMIAR-LIFDMMSERHVTTWNAM 510
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 57/123 (46%)
Query: 84 LLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQPD 143
L NMY KC ++ +FD + +D +SW T++ G + NG + A+++ M + ++P
Sbjct: 176 LENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPS 235
Query: 144 DVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAEAFLR 203
+T + +L S L+S G S + +VDMY + G E A
Sbjct: 236 FITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFD 295
Query: 204 AML 206
ML
Sbjct: 296 GML 298
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 111/203 (54%), Gaps = 13/203 (6%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
++++++WTT++ Y R G E+A+ F +M+ + + +
Sbjct: 299 EKNIVTWTTMITGYGRNGDGEQALRFFVEMMK-SGVDSDHFAYGAVLHACSGLALLGHGK 357
Query: 63 WVHSYIDTRGDLVVGG-----NIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVIC 117
+H G L+ G +GNAL+N+Y KCGD+ F + +KD +SW T++
Sbjct: 358 MIH------GCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLF 411
Query: 118 GLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVP 177
++G +A++L+ M+ G++PD+VTFIGLL CSH GLV EG M F++M Y +P
Sbjct: 412 AFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIP 471
Query: 178 -QMRHYGCMVDMYGRAGLFEEAE 199
++ H CM+DM+GR G EA+
Sbjct: 472 LEVDHVTCMIDMFGRGGHLAEAK 494
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%)
Query: 82 NALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQ 141
N++++ +K G+ L +F + K+ ++W T+I G NG G++A++ F M+ GV
Sbjct: 275 NSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVD 334
Query: 142 PDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAE 199
D + +L CS L+ G M + +V++Y + G +EA+
Sbjct: 335 SDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEAD 392
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 1/129 (0%)
Query: 90 KCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIG 149
K G + +FD + D ++W T++ + G +EA+ LF+ + +PDD +F
Sbjct: 16 KSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTA 75
Query: 150 LLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEA 209
+L C+ G V G + S + ++DMYG+ A R M ++
Sbjct: 76 ILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDS 135
Query: 210 EGPI-WGAL 217
+ W +L
Sbjct: 136 RNEVTWCSL 144
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 125 bits (313), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 115/216 (53%), Gaps = 3/216 (1%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
+++++W ++ YV E+ + +F+ M++ PN + +
Sbjct: 246 NKNLVTWNAMISGYVENSRPEDGLKLFRAMLE-EGIRPNSSGLSSALLGCSELSALQLGR 304
Query: 63 WVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMN 122
+H + ++ L +L++MY KCG++ +F++++ KD ++W +I G A +
Sbjct: 305 QIHQIV-SKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQH 363
Query: 123 GHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAM-RDSYLVPQMRH 181
G+ +A+ LF M+ ++PD +TF+ +L C+H GLV+ G +F++M RD + PQ H
Sbjct: 364 GNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDH 423
Query: 182 YGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
Y CMVD+ GRAG EEA +R+M ++G L
Sbjct: 424 YTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTL 459
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 85/217 (39%), Gaps = 33/217 (15%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +D SW T++ Y R G E+A +F M++ E N
Sbjct: 150 MPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAM----------------- 192
Query: 61 XQWVHSYIDTRGDL-----------VVGGNIGNALLNMYVKCGDMHMGLTIF-DMLEHKD 108
+ YI+ GDL V G A++ Y+K + + +F DM +K+
Sbjct: 193 ---ISGYIEC-GDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKN 248
Query: 109 FISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFK 168
++W +I G N ++ ++LF ML +G++P+ L CS + G +
Sbjct: 249 LVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQ 308
Query: 169 AMRDSYLVPQMRHYGCMVDMYGRAGLFEEAEAFLRAM 205
+ S L + ++ MY + G +A M
Sbjct: 309 IVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVM 345
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 8/136 (5%)
Query: 82 NALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQ 141
N +L+ YV+ + + FD + KD SW T+I G A G ++A +LF M+ +
Sbjct: 128 NIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMM----E 183
Query: 142 PDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAEAF 201
++V++ ++ G + + + FFK +V + M+ Y +A E AEA
Sbjct: 184 KNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVA----WTAMITGYMKAKKVELAEAM 239
Query: 202 LRAMLVEAEGPIWGAL 217
+ M V W A+
Sbjct: 240 FKDMTVNKNLVTWNAM 255
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 124 bits (312), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 111/215 (51%), Gaps = 5/215 (2%)
Query: 5 DVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREA-EPNEATXXXXXXXXXXXXXXXXXQW 63
D I+W LV + + G+ EEA+ VF +M RE + N T +
Sbjct: 656 DNIAWNALVSGFQQSGNNEEALRVFVRM--NREGIDNNNFTFGSAVKAASETANMKQGKQ 713
Query: 64 VHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNG 123
VH+ I T+ + NAL++MY KCG + F + K+ +SW +I + +G
Sbjct: 714 VHAVI-TKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHG 772
Query: 124 HGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQMRHY 182
G EA+ F M+ V+P+ VT +G+L CSH GLV +G +F++M Y L P+ HY
Sbjct: 773 FGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHY 832
Query: 183 GCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
C+VDM RAGL A+ F++ M ++ + +W L
Sbjct: 833 VCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTL 867
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 89/200 (44%), Gaps = 6/200 (3%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
MSQRD +++ TL+ + G+ E+A+ +FK+M EP+ T
Sbjct: 349 MSQRDAVTYNTLINGLSQCGYGEKAMELFKRM-HLDGLEPDSNTLASLVVACSADGTLFR 407
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
Q +H+Y T+ I ALLN+Y KC D+ L F E ++ + W ++
Sbjct: 408 GQQLHAYT-TKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYG 466
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
+ + + ++F M ++ + P+ T+ +L C G + G + + Q+
Sbjct: 467 LLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNF--QLN 524
Query: 181 HYGC--MVDMYGRAGLFEEA 198
Y C ++DMY + G + A
Sbjct: 525 AYVCSVLIDMYAKLGKLDTA 544
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 85/196 (43%), Gaps = 2/196 (1%)
Query: 4 RDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQW 63
+DV+SWTT++ Y + ++A+ F+QM+D R +E Q
Sbjct: 554 KDVVSWTTMIAGYTQYNFDDKALTTFRQMLD-RGIRSDEVGLTNAVSACAGLQALKEGQQ 612
Query: 64 VHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNG 123
+H+ G NAL+ +Y +CG + F+ E D I+W ++ G +G
Sbjct: 613 IHAQACVSG-FSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSG 671
Query: 124 HGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYG 183
+ +EA+++F M +G+ ++ TF + S + +G + + +
Sbjct: 672 NNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCN 731
Query: 184 CMVDMYGRAGLFEEAE 199
++ MY + G +AE
Sbjct: 732 ALISMYAKCGSISDAE 747
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 86/214 (40%), Gaps = 5/214 (2%)
Query: 5 DVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWV 64
+V+ W +++AY + +F+QM E PN+ T + +
Sbjct: 454 NVVLWNVMLVAYGLLDDLRNSFRIFRQM-QIEEIVPNQYTYPSILKTCIRLGDLELGEQI 512
Query: 65 HSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGH 124
HS I + + + + + L++MY K G + I KD +SW T+I G
Sbjct: 513 HSQI-IKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNF 571
Query: 125 GKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGC 184
+A+ F ML +G++ D+V + C+ + EG S +
Sbjct: 572 DDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNA 631
Query: 185 MVDMYGRAGLFEEAEAFLRAMLVEAEGPI-WGAL 217
+V +Y R G E E++L EA I W AL
Sbjct: 632 LVTLYSRCGKIE--ESYLAFEQTEAGDNIAWNAL 663
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 62/127 (48%)
Query: 82 NALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQ 141
NAL+++Y G++ IF + +D +++ T+I GL+ G+G++A++LF M + G++
Sbjct: 327 NALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLE 386
Query: 142 PDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAEAF 201
PD T L+ CS G + G + G ++++Y + E A +
Sbjct: 387 PDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDY 446
Query: 202 LRAMLVE 208
VE
Sbjct: 447 FLETEVE 453
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 66/155 (42%), Gaps = 3/155 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXX-XXXXXXXX 59
M +R + +W ++ E +F +MV PNE T
Sbjct: 146 MPERTIFTWNKMIKELASRNLIGEVFGLFVRMVS-ENVTPNEGTFSGVLEACRGGSVAFD 204
Query: 60 XXQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGL 119
+ +H+ I +G L + N L+++Y + G + + +FD L KD SW +I GL
Sbjct: 205 VVEQIHARILYQG-LRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGL 263
Query: 120 AMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRC 154
+ N EA++LF M V G+ P F +L C
Sbjct: 264 SKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSAC 298
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 63/141 (44%), Gaps = 12/141 (8%)
Query: 64 VHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNG 123
+HS I G L G + L + Y+ GD++ +FD + + +W +I LA
Sbjct: 107 LHSQILKLG-LDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRN 165
Query: 124 HGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSE------GTMFFKAMRDSYLVP 177
E LF M+ + V P++ TF G+L C + + + ++ +RDS +V
Sbjct: 166 LIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVC 225
Query: 178 QMRHYGCMVDMYGRAGLFEEA 198
++D+Y R G + A
Sbjct: 226 NP-----LIDLYSRNGFVDLA 241
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 124 bits (311), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 117/217 (53%), Gaps = 2/217 (0%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M RD + +T + YV+ G +A+F++M A +
Sbjct: 195 MPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFAL-DSVVMVSLLMACGQLGALKH 253
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ VH + R +G N+GNA+ +MYVKC + T+F + +D ISW ++I G
Sbjct: 254 GKSVHGWCIRRCS-CLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYG 312
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
++G + +LF ML +G++P+ VTF+G+L C+H GLV + ++F+ M++ +VP+++
Sbjct: 313 LDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQEYNIVPELK 372
Query: 181 HYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HY + D RAGL EEAE FL M V+ + + GA+
Sbjct: 373 HYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAV 409
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 124 bits (310), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 111/214 (51%), Gaps = 2/214 (0%)
Query: 5 DVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWV 64
DV +W+ L++ Y + G EA VF +M + +P+E + V
Sbjct: 268 DVRAWSALILGYAQNGQPNEAFKVFSEMC-AKNVKPDEFIMVGLMSACSQMGCFELCEKV 326
Query: 65 HSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGH 124
SY+ R + + AL++M KCG M +F+ + +D +S+ +++ G+A++G
Sbjct: 327 DSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGC 386
Query: 125 GKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQMRHYG 183
G EA++LF M+ +G+ PD+V F +L C LV EG +F+ MR Y ++ HY
Sbjct: 387 GSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYS 446
Query: 184 CMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
C+V++ R G +EA +++M EA WG+L
Sbjct: 447 CIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSL 480
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 21/211 (9%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +R+ +SWT LV+AYV+ G EEA ++F M E N +
Sbjct: 171 MPERNAVSWTALVVAYVKSGELEEAKSMFDLM-----PERNLGSWNALVDGLVKSGDLVN 225
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ + + R D++ ++++ Y K GDM +F+ D +W +I G A
Sbjct: 226 AKKLFDEMPKR-DIISY----TSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYA 280
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
NG EA ++FS M + V+PD+ +GL+ CS G DSYL +M
Sbjct: 281 QNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFE-----LCEKVDSYLHQRMN 335
Query: 181 HYG------CMVDMYGRAGLFEEAEAFLRAM 205
+ ++DM + G + A M
Sbjct: 336 KFSSHYVVPALIDMNAKCGHMDRAAKLFEEM 366
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 112/211 (53%), Gaps = 7/211 (3%)
Query: 10 TTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWVHSYID 69
TT++ AY + EEA+ +F +M D +E PNE T +H +
Sbjct: 307 TTIMDAYFQDKSFEEALNLFSKM-DTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVL 365
Query: 70 TRG--DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKE 127
G + V+ +GNAL+NMY K G + F + +D ++W T+I G + +G G+E
Sbjct: 366 KSGYRNHVM---VGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGRE 422
Query: 128 AVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV-PQMRHYGCMV 186
A++ F M+ G P+ +TFIG+L CSH G V +G +F + + V P ++HY C+V
Sbjct: 423 ALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIV 482
Query: 187 DMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+ +AG+F++AE F+R +E + W L
Sbjct: 483 GLLSKAGMFKDAEDFMRTAPIEWDVVAWRTL 513
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 82 NALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQG-V 140
N+L+N+YVKC + +FD++ ++ +SW ++ G +G E ++LF M G
Sbjct: 73 NSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGES 132
Query: 141 QPDDVTFIGLLCRCSHKGLVSEGTMF 166
+P++ + CS+ G + EG F
Sbjct: 133 RPNEFVATVVFKSCSNSGRIEEGKQF 158
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 57/123 (46%)
Query: 83 ALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQP 142
AL+NMY KCG + +FD ++ T++ + +EA+ LFS M + V P
Sbjct: 277 ALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPP 336
Query: 143 DDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAEAFL 202
++ TF LL + L+ +G + + S + +V+MY ++G E+A
Sbjct: 337 NEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAF 396
Query: 203 RAM 205
M
Sbjct: 397 SGM 399
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 122 bits (307), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 107/202 (52%), Gaps = 5/202 (2%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +RD+ +W +++ + G + +A+F++M+ C P+ T
Sbjct: 323 MDERDLFTWNSVLCVHDYCGDHDGTLALFERML-CSGIRPDIVTLTTVLPTCGRLASLRQ 381
Query: 61 XQWVHSYIDTRGDLVVGGN---IGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVIC 117
+ +H Y+ G L + I N+L++MYVKCGD+ +FD + KD SW +I
Sbjct: 382 GREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMIN 441
Query: 118 GLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LV 176
G + G+ A+ +FS M GV+PD++TF+GLL CSH G ++EG F M Y ++
Sbjct: 442 GYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNIL 501
Query: 177 PQMRHYGCMVDMYGRAGLFEEA 198
P HY C++DM GRA EEA
Sbjct: 502 PTSDHYACVIDMLGRADKLEEA 523
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 12/211 (5%)
Query: 5 DVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWV 64
D + W LV Y + E+A+ VF +M + + T + +
Sbjct: 226 DSVLWNALVNGYSQIFRFEDALLVFSKMRE-EGVGVSRHTITSVLSAFTVSGDIDNGRSI 284
Query: 65 HSYIDTRG---DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAM 121
H G D+VV NAL++MY K + +IF+ ++ +D +W +V+C
Sbjct: 285 HGLAVKTGSGSDIVV----SNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDY 340
Query: 122 NGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRH 181
G + LF ML G++PD VT +L C + +G M S L+ +
Sbjct: 341 CGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSS 400
Query: 182 ----YGCMVDMYGRAGLFEEAEAFLRAMLVE 208
+ ++DMY + G +A +M V+
Sbjct: 401 NEFIHNSLMDMYVKCGDLRDARMVFDSMRVK 431
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 62 QWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAM 121
Q +H ++ +G L G +L+NMY KCG M + +F E +D + +I G +
Sbjct: 80 QQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGSE-RDVFGYNALISGFVV 138
Query: 122 NGHGKEAVQLFSLMLVQGVQPDDVTFIGLL 151
NG +A++ + M G+ PD TF LL
Sbjct: 139 NGSPLDAMETYREMRANGILPDKYTFPSLL 168
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 112/218 (51%), Gaps = 4/218 (1%)
Query: 2 SQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXX 61
++RD +W +++ Y + GH E+ VF++M++ + PN T
Sbjct: 482 AERDQATWNSMISGYTQNGHTEKTFLVFRKMLE-QNIRPNAVTVASILPACSQIGSVDLG 540
Query: 62 QWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAM 121
+ +H + R L + +AL++MY K G + +F + ++ +++ T+I G
Sbjct: 541 KQLHGF-SIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQ 599
Query: 122 NGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV-PQMR 180
+G G+ A+ LF M G++PD +TF+ +L CS+ GL+ EG F+ MR+ Y + P
Sbjct: 600 HGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSE 659
Query: 181 HYGCMVDMYGRAGLFEEAEAFLRAMLVEAE-GPIWGAL 217
HY C+ DM GR G EA F++ + E +WG+L
Sbjct: 660 HYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSL 697
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 5/201 (2%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +RDV+SW T++ A+V+ G +E + + +M + + + T
Sbjct: 379 MRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK-QGFKIDYITVTALLSAASNLRNKEI 437
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFD--MLEHKDFISWGTVICG 118
+ H+++ +G G N + L++MY K G + + +F+ +D +W ++I G
Sbjct: 438 GKQTHAFLIRQGIQFEGMN--SYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISG 495
Query: 119 LAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQ 178
NGH ++ +F ML Q ++P+ VT +L CS G V G YL
Sbjct: 496 YTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQN 555
Query: 179 MRHYGCMVDMYGRAGLFEEAE 199
+ +VDMY +AG + AE
Sbjct: 556 VFVASALVDMYSKAGAIKYAE 576
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 95/229 (41%), Gaps = 29/229 (12%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
+R++ W T++ YV+ E++ +F + + +E +E T +
Sbjct: 279 ERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGR 338
Query: 63 WVHSYIDT--RGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
H ++ R +V I N+L+ MY +CG +H +F + +D +SW T+I
Sbjct: 339 QFHGFVSKNFRELPIV---IVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFV 395
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCS-----------HKGLVSEGTMFFKA 169
NG E + L M QG + D +T LL S H L+ +G F+
Sbjct: 396 QNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQ-FEG 454
Query: 170 MRDSYLVPQMRHYGCMVDMYGRAGLFEEAEAFLRAM-LVEAEGPIWGAL 217
M +SYL +DMY ++GL ++ E + W ++
Sbjct: 455 M-NSYL----------IDMYSKSGLIRISQKLFEGSGYAERDQATWNSM 492
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 11/147 (7%)
Query: 80 IGNALLNMYVKC------GDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFS 133
+ N+L+NMYV C + + +FD + K+ ++W T+I G EA + F
Sbjct: 144 VHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFG 203
Query: 134 LMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMR---DSYLVPQMRHYGCMVDMYG 190
+M+ V+P V+F+ + S + + +F+ M D Y V + + MY
Sbjct: 204 IMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEY-VKDLFVVSSAISMYA 262
Query: 191 RAGLFEEAEAFLRAMLVEAEGPIWGAL 217
G E + + VE +W +
Sbjct: 263 ELGDIESSRRVFDS-CVERNIEVWNTM 288
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 109/215 (50%), Gaps = 3/215 (1%)
Query: 5 DVISWTTLVMAYVRGGH-CEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQW 63
D++ W T++ Y EEAV F+QM P++ + +
Sbjct: 308 DLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGH-RPDDCSFVCVTSACSNLSSPSQCKQ 366
Query: 64 VHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNG 123
+H ++ NAL+++Y K G++ +FD + + +S+ +I G A +G
Sbjct: 367 IHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHG 426
Query: 124 HGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV-PQMRHY 182
HG EA+ L+ ML G+ P+ +TF+ +L C+H G V EG +F M++++ + P+ HY
Sbjct: 427 HGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHY 486
Query: 183 GCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
CM+D+ GRAG EEAE F+ AM + W AL
Sbjct: 487 SCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAAL 521
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 94/207 (45%), Gaps = 19/207 (9%)
Query: 4 RDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQW 63
RD +SW ++++AY + +A+A++K+M+ + + + T +
Sbjct: 203 RDEVSWNSMIVAYGQHKEGAKALALYKEMI-FKGFKIDMFTLASVLNALTSLDHLIGGRQ 261
Query: 64 VHSYIDTRGDLVVGG-----NIGNALLNMYVKCGD---MHMGLTIFDMLEHKDFISWGTV 115
H G L+ G ++G+ L++ Y KCG M+ +F + D + W T+
Sbjct: 262 FH------GKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTM 315
Query: 116 ICGLAMNGH-GKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY 174
I G +MN +EAV+ F M G +PDD +F+ + CS+ S+ S+
Sbjct: 316 ISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSH 375
Query: 175 LVPQMRHY--GCMVDMYGRAGLFEEAE 199
+P R ++ +Y ++G ++A
Sbjct: 376 -IPSNRISVNNALISLYYKSGNLQDAR 401
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 111/216 (51%), Gaps = 3/216 (1%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
+ DV+SWT+++ V E+A FKQM+ PN AT +
Sbjct: 250 KPDVVSWTSIISGLVHNFQNEKAFDAFKQML-THGLYPNSATIITLLPACTTLAYMKHGK 308
Query: 63 WVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMN 122
+H Y G L G + +ALL+MY KCG + + +F K +++ ++I A +
Sbjct: 309 EIHGYSVVTG-LEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANH 367
Query: 123 GHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQMRH 181
G +AV+LF M G + D +TF +L CSH GL G F M++ Y +VP++ H
Sbjct: 368 GLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEH 427
Query: 182 YGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
Y CMVD+ GRAG EA ++AM +E + +WGAL
Sbjct: 428 YACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGAL 463
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 113/211 (53%), Gaps = 8/211 (3%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M R+V+SW +++ + + G EA+ +F QM+ +P+E T
Sbjct: 302 MVVRNVVSWNAMIVGFAQNGEGREAMRLFGQML-LENLQPDELTFASVLSSCAKFSAIWE 360
Query: 61 XQWVHSYIDTRG--DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICG 118
+ V + + +G D + ++ N+L++ Y + G++ L F + D +SW +VI
Sbjct: 361 IKQVQAMVTKKGSADFL---SVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGA 417
Query: 119 LAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV-P 177
LA +G +E++Q+F ML Q +QPD +TF+ +L CSH GLV EG FK M + Y +
Sbjct: 418 LASHGFAEESLQMFESML-QKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEA 476
Query: 178 QMRHYGCMVDMYGRAGLFEEAEAFLRAMLVE 208
+ HY C++D+ GRAG +EA L +M E
Sbjct: 477 EDEHYTCLIDLLGRAGFIDEASDVLNSMPTE 507
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 4/152 (2%)
Query: 4 RDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQW 63
RD++ W LV +YV G +EA + K M + +
Sbjct: 206 RDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACRIEQGKQIHA 265
Query: 64 VHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNG 123
+ + + D+ V ALLNMY K + F+ + ++ +SW +I G A NG
Sbjct: 266 ILFKVSYQFDIPVA----TALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNG 321
Query: 124 HGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCS 155
G+EA++LF ML++ +QPD++TF +L C+
Sbjct: 322 EGREAMRLFGQMLLENLQPDELTFASVLSSCA 353
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 110/207 (53%), Gaps = 4/207 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M R+V+SWT ++ AYV+ +EA +F++M + +PNE T
Sbjct: 211 MPMRNVVSWTAMITAYVKNRRPDEAFQLFRRM-QVDDVKPNEFTIVNLLQASTQLGSLSM 269
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+WVH Y G V+ +G AL++MY KCG + +FD+++ K +W ++I L
Sbjct: 270 GRWVHDYAHKNG-FVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLG 328
Query: 121 MNGHGKEAVQLFSLMLVQG-VQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQ 178
++G G+EA+ LF M + V+PD +TF+G+L C++ G V +G +F M Y + P
Sbjct: 329 VHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPI 388
Query: 179 MRHYGCMVDMYGRAGLFEEAEAFLRAM 205
H CM+ + +A E+A + +M
Sbjct: 389 REHNACMIQLLEQALEVEKASNLVESM 415
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 111/216 (51%), Gaps = 3/216 (1%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
+ +V++WT+++ G ++++ F+QM + N T +
Sbjct: 396 KANVVTWTSVIKGCNVQGRGDDSLEYFRQM-QFSKVLANSVTICCILSICAELPALNLGR 454
Query: 63 WVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMN 122
+H ++ R + + NAL+NMY KCG + G +F+ + KD ISW ++I G M+
Sbjct: 455 EIHGHV-IRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMH 513
Query: 123 GHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQMRH 181
G ++A+ +F M+ G PD + + +L CSH GLV +G F +M + L PQ H
Sbjct: 514 GFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEH 573
Query: 182 YGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
Y C+VD+ GR G +EA ++ M +E + + GAL
Sbjct: 574 YACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGAL 609
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 122 bits (305), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 85/138 (61%), Gaps = 1/138 (0%)
Query: 81 GNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGV 140
AL++MYVKCG++ G+ +FD + +D +SW +I G NG +EA + F M+ G+
Sbjct: 481 ATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGI 540
Query: 141 QPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQMRHYGCMVDMYGRAGLFEEAE 199
+P+ VTF+GLL C H GL+ E + M+ Y L P + HY C+VD+ G+AGLF+EA
Sbjct: 541 EPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEAN 600
Query: 200 AFLRAMLVEAEGPIWGAL 217
+ M +E + IW +L
Sbjct: 601 ELINKMPLEPDKTIWTSL 618
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 77/167 (46%), Gaps = 16/167 (9%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
MS+R++++WTT+V Y G +A+ ++++M+D E NE
Sbjct: 66 MSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQL 125
Query: 61 XQWVHSYI---DTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVIC 117
V+ I + RGD+V + N++++MYVK G + + F + SW T+I
Sbjct: 126 GILVYERIGKENLRGDVV----LMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLIS 181
Query: 118 GLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGT 164
G G EAV LF M QP+ V++ C G V +G+
Sbjct: 182 GYCKAGLMDEAVTLFHRM----PQPNVVSW-----NCLISGFVDKGS 219
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 122 bits (305), Expect = 2e-28, Method: Composition-based stats.
Identities = 61/225 (27%), Positives = 116/225 (51%), Gaps = 16/225 (7%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQM------VDCREAEPNEATXXXXXXXXXX 54
+S+RD++SW +++ + + A+ +F+QM DC +
Sbjct: 502 LSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDC-------VSISAALSACAN 554
Query: 55 XXXXXXXQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGT 114
+ +H ++ + L + L++MY KCG++ + +F ++ K+ +SW +
Sbjct: 555 LPSESFGKAIHGFM-IKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNS 613
Query: 115 VICGLAMNGHGKEAVQLFSLMLVQ-GVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDS 173
+I +G K+++ LF M+ + G++PD +TF+ ++ C H G V EG FF++M +
Sbjct: 614 IIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTED 673
Query: 174 Y-LVPQMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
Y + PQ HY C+VD++GRAG EA +++M + +WG L
Sbjct: 674 YGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTL 718
Score = 77.8 bits (190), Expect = 5e-15, Method: Composition-based stats.
Identities = 51/201 (25%), Positives = 91/201 (45%), Gaps = 2/201 (0%)
Query: 5 DVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWV 64
DV+ +T ++ Y+ G +++ +F+ +V + PNE T + +
Sbjct: 405 DVVVFTAMISGYLHNGLYIDSLEMFRWLVKVK-ISPNEITLVSILPVIGILLALKLGREL 463
Query: 65 HSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGH 124
H +I +G NIG A+++MY KCG M++ IF+ L +D +SW ++I A + +
Sbjct: 464 HGFIIKKG-FDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDN 522
Query: 125 GKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGC 184
A+ +F M V G+ D V+ L C++ S G M L +
Sbjct: 523 PSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSEST 582
Query: 185 MVDMYGRAGLFEEAEAFLRAM 205
++DMY + G + A + M
Sbjct: 583 LIDMYAKCGNLKAAMNVFKTM 603
Score = 66.2 bits (160), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 2/149 (1%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
Q+D + W ++ Y + G + + F M + PN T
Sbjct: 201 QKDCVIWNVMLNGYAKCGALDSVIKGFSVM-RMDQISPNAVTFDCVLSVCASKLLIDLGV 259
Query: 63 WVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMN 122
+H + G + G+I N+LL+MY KCG +F M+ D ++W +I G +
Sbjct: 260 QLHGLVVVSG-VDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQS 318
Query: 123 GHGKEAVQLFSLMLVQGVQPDDVTFIGLL 151
G +E++ F M+ GV PD +TF LL
Sbjct: 319 GLMEESLTFFYEMISSGVLPDAITFSSLL 347
Score = 62.4 bits (150), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/209 (21%), Positives = 94/209 (44%), Gaps = 3/209 (1%)
Query: 9 WTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWVHSYI 68
W +++ ++VR G +A+A + +M+ C P+ +T ++ +
Sbjct: 106 WNSIISSFVRNGLLNQALAFYFKML-CFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTV 164
Query: 69 DTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEA 128
+ G + + ++L+ Y++ G + + +FD + KD + W ++ G A G
Sbjct: 165 SSLG-MDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSV 223
Query: 129 VQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDM 188
++ FS+M + + P+ VTF +L C+ K L+ G + S + + ++ M
Sbjct: 224 IKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSM 283
Query: 189 YGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
Y + G F++A R M+ A+ W +
Sbjct: 284 YSKCGRFDDASKLFR-MMSRADTVTWNCM 311
Score = 58.9 bits (141), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 70/151 (46%), Gaps = 2/151 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
MS+ D ++W ++ YV+ G EE++ F +M+ P+ T
Sbjct: 300 MSRADTVTWNCMISGYVQSGLMEESLTFFYEMIS-SGVLPDAITFSSLLPSVSKFENLEY 358
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H YI R + + + +AL++ Y KC + M IF D + + +I G
Sbjct: 359 CKQIHCYI-MRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYL 417
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLL 151
NG +++++F ++ + P+++T + +L
Sbjct: 418 HNGLYIDSLEMFRWLVKVKISPNEITLVSIL 448
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 122 bits (305), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 114/215 (53%), Gaps = 2/215 (0%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ + SW+++V A G E + +F+ M + E+
Sbjct: 193 LESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNL 252
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+H ++ R + + +L++MYVKCG + L IF +E ++ +++ +I GLA
Sbjct: 253 GMSIHGFL-LRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLA 311
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAM-RDSYLVPQM 179
++G G+ A+++FS M+ +G++PD V ++ +L CSH GLV EG F M ++ + P
Sbjct: 312 LHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTA 371
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIW 214
HYGC+VD+ GRAGL EEA ++++ +E IW
Sbjct: 372 EHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIW 406
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 89/202 (44%), Gaps = 11/202 (5%)
Query: 9 WTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWVHSYI 68
+ T++ YV EEA+ + +M+ R EP+ T + +H +
Sbjct: 100 FNTMIRGYVNVMSFEEALCFYNEMMQ-RGNEPDNFTYPCLLKACTRLKSIREGKQIHGQV 158
Query: 69 DTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEA 128
G L + N+L+NMY +CG+M + +F+ LE K SW +++ A G E
Sbjct: 159 FKLG-LEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSEC 217
Query: 129 VQLFSLMLVQ-GVQPDDVTFIGLLCRCSHKGLVSEGT----MFFKAMRDSYLVPQMRHYG 183
+ LF M + ++ ++ + L C++ G ++ G + + + ++ Q
Sbjct: 218 LLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTS--- 274
Query: 184 CMVDMYGRAGLFEEAEAFLRAM 205
+VDMY + G ++A + M
Sbjct: 275 -LVDMYVKCGCLDKALHIFQKM 295
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 122 bits (305), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 3/214 (1%)
Query: 5 DVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWV 64
D ++W T++ A VR G + V QM E P+ AT + +
Sbjct: 473 DTVTWNTVISACVRFGDFATGLQVTTQMRKS-EVVPDMATFLVTLPMCASLAAKRLGKEI 531
Query: 65 HSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGH 124
H + R IGNAL+ MY KCG + +F+ + +D ++W +I M G
Sbjct: 532 HCCL-LRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGE 590
Query: 125 GKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV-PQMRHYG 183
G++A++ F+ M G+ PD V FI ++ CSH GLV EG F+ M+ Y + P + HY
Sbjct: 591 GEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYA 650
Query: 184 CMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
C+VD+ R+ +AE F++AM ++ + IW ++
Sbjct: 651 CVVDLLSRSQKISKAEEFIQAMPIKPDASIWASV 684
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 98/200 (49%), Gaps = 17/200 (8%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M RD +S+ T++ Y++ EE+V +F + +D + +P+ T
Sbjct: 268 MDVRDSVSYNTMICGYLKLEMVEESVRMFLENLD--QFKPDLLTVSSVLRACGHLRDLSL 325
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+++++Y+ G V+ + N L+++Y KCGDM +F+ +E KD +SW ++I G
Sbjct: 326 AKYIYNYMLKAG-FVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYI 384
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSH-------KGLVSEGTMFFKAMRDS 173
+G EA++LF +M++ Q D +T++ L+ + KGL S G S
Sbjct: 385 QSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGI-------KS 437
Query: 174 YLVPQMRHYGCMVDMYGRAG 193
+ + ++DMY + G
Sbjct: 438 GICIDLSVSNALIDMYAKCG 457
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 87/205 (42%), Gaps = 2/205 (0%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +D +SW +++ Y++ G EA+ +FK M+ E + + T
Sbjct: 368 MECKDTVSWNSIISGYIQSGDLMEAMKLFKMMM-IMEEQADHITYLMLISVSTRLADLKF 426
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +HS + + + ++ NAL++MY KCG++ L IF + D ++W TVI
Sbjct: 427 GKGLHSN-GIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACV 485
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
G +Q+ + M V PD TF+ L C+ G + +++
Sbjct: 486 RFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQ 545
Query: 181 HYGCMVDMYGRAGLFEEAEAFLRAM 205
+++MY + G E + M
Sbjct: 546 IGNALIEMYSKCGCLENSSRVFERM 570
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 86/193 (44%), Gaps = 3/193 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M RD++SW +L+ Y G+ EEA+ ++ ++ + P+ T
Sbjct: 167 MPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIV-PDSFTVSSVLPAFGNLLVVKQ 225
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
Q +H + + + + N L+ MY+K +FD ++ +D +S+ T+ICG
Sbjct: 226 GQGLHGFA-LKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYL 284
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
+E+V++F L Q +PD +T +L C H +S + M + V +
Sbjct: 285 KLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLEST 343
Query: 181 HYGCMVDMYGRAG 193
++D+Y + G
Sbjct: 344 VRNILIDVYAKCG 356
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 72/151 (47%), Gaps = 8/151 (5%)
Query: 4 RDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQW 63
++V W +++ A+ + G EA+ + ++ + + P++ T
Sbjct: 69 KNVYLWNSIIRAFSKNGLFPEALEFYGKLRESK-VSPDKYTFPSVIKACAGLFDAEMGDL 127
Query: 64 VHSYIDTRG---DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
V+ I G DL VG NAL++MY + G + +FD + +D +SW ++I G +
Sbjct: 128 VYEQILDMGFESDLFVG----NALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYS 183
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLL 151
+G+ +EA++++ + + PD T +L
Sbjct: 184 SHGYYEEALEIYHELKNSWIVPDSFTVSSVL 214
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 121 bits (304), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 115/218 (52%), Gaps = 6/218 (2%)
Query: 4 RDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQW 63
+DV+ WT ++ YV+ +EA+ +F+ M P+ +W
Sbjct: 242 KDVVLWTAMMNGYVQFNRFDEALELFRCM-QTAGIRPDNFVLVSLLTGCAQTGALEQGKW 300
Query: 64 VHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNG 123
+H YI+ + V +G AL++MY KCG + L +F ++ +D SW ++I GLAMNG
Sbjct: 301 IHGYIN-ENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNG 359
Query: 124 HGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV-PQMRHY 182
A+ L+ M GV+ D +TF+ +L C+H G V+EG F +M + + V P+ H
Sbjct: 360 MSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHC 419
Query: 183 GCMVDMYGRAGLFEEAEAFLRAMLVEAEG---PIWGAL 217
C++D+ RAGL +EAE + M E++ P++ +L
Sbjct: 420 SCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSL 457
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 108/249 (43%), Gaps = 36/249 (14%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M QRDV+SW L+ +YV G E+A+ VFK+M + +E T
Sbjct: 107 MPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEI 166
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ ++ ++ T ++ V IGNAL++M+ KCG + +FD + K+ W +++ G
Sbjct: 167 GERIYRFVVTEFEMSV--RIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYV 224
Query: 121 --------------------------MNGHGK-----EAVQLFSLMLVQGVQPDDVTFIG 149
MNG+ + EA++LF M G++PD+ +
Sbjct: 225 STGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVS 284
Query: 150 LLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEA-EAFLRAMLVE 208
LL C+ G + +G + ++ + +VDMY + G E A E F + E
Sbjct: 285 LLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYE--IKE 342
Query: 209 AEGPIWGAL 217
+ W +L
Sbjct: 343 RDTASWTSL 351
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 68/145 (46%), Gaps = 3/145 (2%)
Query: 62 QWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAM 121
+ VH Y + L + N+L+ MY G + + +FD + +D +SW +I
Sbjct: 66 EKVHGYA-VKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVG 124
Query: 122 NGHGKEAVQLFSLMLVQ-GVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
NG ++A+ +F M + ++ D+ T + L CS + G ++ + + + +R
Sbjct: 125 NGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEM-SVR 183
Query: 181 HYGCMVDMYGRAGLFEEAEAFLRAM 205
+VDM+ + G ++A A +M
Sbjct: 184 IGNALVDMFCKCGCLDKARAVFDSM 208
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 120 bits (302), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 105/210 (50%), Gaps = 4/210 (1%)
Query: 7 ISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWVHS 66
+SW+ ++ Y + EEAV FK + + N T VH+
Sbjct: 352 VSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHA 411
Query: 67 YIDTRGDLVVGGNIG-NALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHG 125
R ++G G +AL+ MY KCG + +F+ +++ D ++W I G A G+
Sbjct: 412 DAIKRS--LIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNA 469
Query: 126 KEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV-PQMRHYGC 184
EA++LF M+ G++P+ VTFI +L CSH GLV +G M Y V P + HY C
Sbjct: 470 SEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDC 529
Query: 185 MVDMYGRAGLFEEAEAFLRAMLVEAEGPIW 214
M+D+Y R+GL +EA F++ M E + W
Sbjct: 530 MIDIYARSGLLDEALKFMKNMPFEPDAMSW 559
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 89/198 (44%), Gaps = 2/198 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
MS+ + +S TT++ AY G ++AV +F M+ + P+
Sbjct: 144 MSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFG 203
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
Q +H+++ R L +I ++NMYVKCG + +FD + K ++ ++ G
Sbjct: 204 RQ-IHAHV-IRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYT 261
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
G ++A++LF ++ +GV+ D F +L C+ ++ G + L ++
Sbjct: 262 QAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVS 321
Query: 181 HYGCMVDMYGRAGLFEEA 198
+VD Y + FE A
Sbjct: 322 VGTPLVDFYIKCSSFESA 339
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 120 bits (301), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 115/219 (52%), Gaps = 6/219 (2%)
Query: 2 SQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXX 61
S + ++ WT ++ + + G EEA+ +K+M P++AT
Sbjct: 693 SPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRH-DGVLPDQATFVTVLRVCSVLSSLREG 751
Query: 62 QWVHSYI-DTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFD-MLEHKDFISWGTVICGL 119
+ +HS I DL N L++MY KCGDM +FD M + +SW ++I G
Sbjct: 752 RAIHSLIFHLAHDL--DELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGY 809
Query: 120 AMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQ 178
A NG+ ++A+++F M + PD++TF+G+L CSH G VS+G F+ M Y + +
Sbjct: 810 AKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEAR 869
Query: 179 MRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+ H CMVD+ GR G +EA+ F+ A ++ + +W +L
Sbjct: 870 VDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSL 908
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 84/205 (40%), Gaps = 2/205 (0%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
MS DV++W ++ + + G A+ F M + +T
Sbjct: 287 MSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKS-SVKSTRSTLGSVLSAIGIVANLDL 345
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
VH+ G L +G++L++MY KC M +F+ LE K+ + W +I G A
Sbjct: 346 GLVVHAEAIKLG-LASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYA 404
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
NG + ++LF M G DD TF LL C+ + G+ F + L +
Sbjct: 405 HNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLF 464
Query: 181 HYGCMVDMYGRAGLFEEAEAFLRAM 205
+VDMY + G E+A M
Sbjct: 465 VGNALVDMYAKCGALEDARQIFERM 489
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 3/166 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M RD ++W T++ +YV+ + EA +FK+M C + A
Sbjct: 489 MCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIV-SDGACLASTLKACTHVHGLYQ 547
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ VH + + L + G++L++MY KCG + +F L +S +I G +
Sbjct: 548 GKQVHC-LSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYS 606
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMF 166
N + +EAV LF ML +GV P ++TF ++ C ++ GT F
Sbjct: 607 QN-NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQF 651
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 84/217 (38%), Gaps = 8/217 (3%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ +++ + W ++ Y G + + +F M ++ T
Sbjct: 388 LEEKNDVFWNAMIRGYAHNGESHKVMELFMDM-KSSGYNIDDFTFTSLLSTCAASHDLEM 446
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
HS I + L +GNAL++MY KCG + IF+ + +D ++W T+I
Sbjct: 447 GSQFHSII-IKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYV 505
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
+ + EA LF M + G+ D L C+H + +G L +
Sbjct: 506 QDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLH 565
Query: 181 HYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
++DMY + G+ ++A ++ P W +
Sbjct: 566 TGSSLIDMYSKCGIIKDARKVFSSL------PEWSVV 596
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 79/191 (41%), Gaps = 6/191 (3%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
++DV +W +++ Y G + + F + + + PN+ T +
Sbjct: 122 EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFE-NQIFPNKFTFSIVLSTCARETNVEFGR 180
Query: 63 WVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMN 122
+H + G L G AL++MY KC + +F+ + + + W + G
Sbjct: 181 QIHCSMIKMG-LERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKA 239
Query: 123 GHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHY 182
G +EAV +F M +G +PD + F+ ++ G + + + F M P + +
Sbjct: 240 GLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS----PDVVAW 295
Query: 183 GCMVDMYGRAG 193
M+ +G+ G
Sbjct: 296 NVMISGHGKRG 306
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 55/122 (45%), Gaps = 1/122 (0%)
Query: 78 GNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLV 137
G +GNA++++Y KC + FD LE KD +W +++ + G + ++ F +
Sbjct: 95 GRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFE 153
Query: 138 QGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEE 197
+ P+ TF +L C+ + V G +M L G +VDMY + +
Sbjct: 154 NQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISD 213
Query: 198 AE 199
A
Sbjct: 214 AR 215
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 87/137 (63%), Gaps = 2/137 (1%)
Query: 80 IGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQG 139
+G+AL++MY KCG + L F+ + ++ SW ++I G A +G G+EA++LF M + G
Sbjct: 656 VGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDG 715
Query: 140 -VQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQMRHYGCMVDMYGRAGLFEE 197
PD VTF+G+L CSH GL+ EG F++M DSY L P++ H+ CM D+ GRAG ++
Sbjct: 716 QTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDK 775
Query: 198 AEAFLRAMLVEAEGPIW 214
E F+ M ++ IW
Sbjct: 776 LEDFIEKMPMKPNVLIW 792
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 69/160 (43%), Gaps = 7/160 (4%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXX-- 58
M R+ ++ L++ VR EEA +F M + P
Sbjct: 269 METRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVG 328
Query: 59 -XXXQWVHSYIDTRG--DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTV 115
+ VH ++ T G D +VG IGN L+NMY KCG + +F + KD +SW ++
Sbjct: 329 LKKGREVHGHVITTGLVDFMVG--IGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSM 386
Query: 116 ICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCS 155
I GL NG EAV+ + M + P T I L C+
Sbjct: 387 ITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCA 426
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 82 NALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQ 141
N L+N Y++ GD +FD + ++ +SW ++ G + NG KEA+ M+ +G+
Sbjct: 40 NNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIF 99
Query: 142 PDDVTFIGLLCRCSHKGLVSEGTMF 166
+ F+ +L C G V G +F
Sbjct: 100 SNQYAFVSVLRACQEIGSV--GILF 122
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 115/219 (52%), Gaps = 4/219 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +++ +SWT L+ YVR G A+ +F++M+ +P + T
Sbjct: 271 MPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIAL-GVKPEQFTFSSCLCASASIASLRH 329
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHK-DFISWGTVICGL 119
+ +H Y+ R ++ + ++L++MY K G + +F + + K D + W T+I L
Sbjct: 330 GKEIHGYM-IRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISAL 388
Query: 120 AMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQ 178
A +G G +A+++ M+ VQP+ T + +L CSH GLV EG +F++M + +VP
Sbjct: 389 AQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPD 448
Query: 179 MRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HY C++D+ GRAG F+E + M E + IW A+
Sbjct: 449 QEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAI 487
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 93/241 (38%), Gaps = 47/241 (19%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREA--EPNEATXXXXXXXXXXXXXX 58
M +RDV+SW T+V+ Y + G+ EA+ +K+ R + + NE +
Sbjct: 139 MPERDVVSWNTMVIGYAQDGNLHEALWFYKEF---RRSGIKFNEFSFAGLLTACVKSRQL 195
Query: 59 XXXQWVHSYIDTRGDLVVGGNIGN-----ALLNMYVKCGDMHMGLTIFDMLEHKDF---- 109
+ H G ++V G + N ++++ Y KCG M FD + KD
Sbjct: 196 QLNRQAH------GQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWT 249
Query: 110 ---------------------------ISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQP 142
+SW +I G G G A+ LF M+ GV+P
Sbjct: 250 TLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKP 309
Query: 143 DDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAEAFL 202
+ TF LC + + G M + + P ++DMY ++G E +E
Sbjct: 310 EQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVF 369
Query: 203 R 203
R
Sbjct: 370 R 370
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 73/187 (39%), Gaps = 32/187 (17%)
Query: 62 QWVHSYIDTRGDLVVGGNIGNALLNMYVKCG----------DMHM--------------- 96
+W+H ++ G + N L+ MY+KCG MH+
Sbjct: 66 KWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVK 125
Query: 97 ------GLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGL 150
+FD + +D +SW T++ G A +G+ EA+ + G++ ++ +F GL
Sbjct: 126 SGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGL 185
Query: 151 LCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAE 210
L C + + + + + ++D Y + G E A+ M V+ +
Sbjct: 186 LTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVK-D 244
Query: 211 GPIWGAL 217
IW L
Sbjct: 245 IHIWTTL 251
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 119 bits (298), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 107/214 (50%), Gaps = 7/214 (3%)
Query: 9 WTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWVHSYI 68
W+ ++ V+ +A+ +FK+M + EPN AT +H Y+
Sbjct: 388 WSAIIAGCVQNELVSDALGLFKRMRR-EDVEPNIATLNSLLPAYAALADLRQAMNIHCYL 446
Query: 69 DTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHK----DFISWGTVICGLAMNGH 124
T+ + + L+++Y KCG + IF+ ++ K D + WG +I G M+G
Sbjct: 447 -TKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGD 505
Query: 125 GKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQMRHYG 183
G A+Q+F M+ GV P+++TF L CSH GLV EG F+ M + Y + + HY
Sbjct: 506 GHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYT 565
Query: 184 CMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
C+VD+ GRAG +EA + + E +WGAL
Sbjct: 566 CIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGAL 599
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 85/165 (51%), Gaps = 6/165 (3%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M RDVISW T++ Y R G+ +A+ +F MV+ + + AT
Sbjct: 178 MKNRDVISWNTMISGYYRNGYMNDALMMFDWMVN-ESVDLDHATIVSMLPVCGHLKDLEM 236
Query: 61 XQWVHSYIDTR--GDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICG 118
+ VH ++ + GD + + NAL+NMY+KCG M +FD +E +D I+W +I G
Sbjct: 237 GRNVHKLVEEKRLGDKI---EVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMING 293
Query: 119 LAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEG 163
+G + A++L LM +GV+P+ VT L+ C V++G
Sbjct: 294 YTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDG 338
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 2/200 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMV-DCREAEPNEATXXXXXXXXXXXXXXX 59
M Q ++S+ ++ YVR G +A++VF +MV + + P+ T
Sbjct: 75 MPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMK 134
Query: 60 XXQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGL 119
VH I R + NALL MY+ G + M +FD+++++D ISW T+I G
Sbjct: 135 LGLVVHGRI-LRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGY 193
Query: 120 AMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQM 179
NG+ +A+ +F M+ + V D T + +L C H + G K + + L ++
Sbjct: 194 YRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKI 253
Query: 180 RHYGCMVDMYGRAGLFEEAE 199
+V+MY + G +EA
Sbjct: 254 EVKNALVNMYLKCGRMDEAR 273
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 110/219 (50%), Gaps = 7/219 (3%)
Query: 4 RDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQW 63
R+V+SWT+++ AY + EA+ +F+ ++ A QW
Sbjct: 197 RNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSD--RANQFMLASVISACSSLGRLQW 254
Query: 64 --VHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAM 121
V + TRG + +LL+MY KCG + IF + IS+ ++I A
Sbjct: 255 GKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAK 314
Query: 122 NGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQMR 180
+G G+ AV+LF M+ + P+ VT +G+L CSH GLV+EG + M + Y +VP R
Sbjct: 315 HGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSR 374
Query: 181 HYGCMVDMYGRAGLFEEAEAFLRAMLVEAE--GPIWGAL 217
HY C+VDM GR G +EA + + V AE +WGAL
Sbjct: 375 HYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGAL 413
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 93/208 (44%), Gaps = 6/208 (2%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M + +V+SWT+++ Y G + A+++F++M + R PNE T
Sbjct: 90 MCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRI 149
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDML--EHKDFISWGTVICG 118
+ +H+ ++ G L + ++L++MY KC D+ +FD + ++ +SW ++I
Sbjct: 150 GKNIHARLEISG-LRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITA 208
Query: 119 LAMNGHGKEAVQLFSLM--LVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV 176
A N G EA++LF + + + ++ CS G + G + +
Sbjct: 209 YAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYE 268
Query: 177 PQMRHYGCMVDMYGRAGLFEEAEA-FLR 203
++DMY + G AE FLR
Sbjct: 269 SNTVVATSLLDMYAKCGSLSCAEKIFLR 296
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 108/220 (49%), Gaps = 6/220 (2%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXX-XXXXXXXX 59
+ +D+++W+ ++ Y + G E A+ +F ++ +PNE T
Sbjct: 454 IDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKG-GIKPNEFTFSSILNVCAATNASMG 512
Query: 60 XXQWVHSY-IDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICG 118
+ H + I +R D + + +ALL MY K G++ +F KD +SW ++I G
Sbjct: 513 QGKQFHGFAIKSRLDSSLC--VSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISG 570
Query: 119 LAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAM-RDSYLVP 177
A +G +A+ +F M + V+ D VTFIG+ C+H GLV EG +F M RD + P
Sbjct: 571 YAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAP 630
Query: 178 QMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
H CMVD+Y RAG E+A + M A IW +
Sbjct: 631 TKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTI 670
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 7/200 (3%)
Query: 5 DVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWV 64
+V+SWT ++ +++ EEAV +F +M + PNE T V
Sbjct: 361 NVVSWTAMISGFLQNDGKEEAVDLFSEM-KRKGVRPNEFTYSVILTALPVISPSE----V 415
Query: 65 HSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGH 124
H+ + + + +G ALL+ YVK G + +F ++ KD ++W ++ G A G
Sbjct: 416 HAQV-VKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGE 474
Query: 125 GKEAVQLFSLMLVQGVQPDDVTFIGLLCRC-SHKGLVSEGTMFFKAMRDSYLVPQMRHYG 183
+ A+++F + G++P++ TF +L C + + +G F S L +
Sbjct: 475 TEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSS 534
Query: 184 CMVDMYGRAGLFEEAEAFLR 203
++ MY + G E AE +
Sbjct: 535 ALLTMYAKKGNIESAEEVFK 554
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 90/188 (47%), Gaps = 15/188 (7%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +R+V++WTTL+ Y R +E + +F +M + +PN T
Sbjct: 154 MKERNVVTWTTLISGYARNSMNDEVLTLFMRMQN-EGTQPNSFTFAAALGVLAEEGVGGR 212
Query: 61 XQWVHSYIDTRG-DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGL 119
VH+ + G D + + N+L+N+Y+KCG++ +FD E K ++W ++I G
Sbjct: 213 GLQVHTVVVKNGLDKTIP--VSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGY 270
Query: 120 AMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCS-----------HKGLVSEGTMFFK 168
A NG EA+ +F M + V+ + +F ++ C+ H +V G +F +
Sbjct: 271 AANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQ 330
Query: 169 AMRDSYLV 176
+R + +V
Sbjct: 331 NIRTALMV 338
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 62/131 (47%)
Query: 79 NIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQ 138
++G +L++ Y+K + G +FD ++ ++ ++W T+I G A N E + LF M +
Sbjct: 129 SVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNE 188
Query: 139 GVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEA 198
G QP+ TF L + +G+ G + + L + ++++Y + G +A
Sbjct: 189 GTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKA 248
Query: 199 EAFLRAMLVEA 209
V++
Sbjct: 249 RILFDKTEVKS 259
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 110/218 (50%), Gaps = 3/218 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
MS+R+V++W +L+ + E +F++M + + AT
Sbjct: 297 MSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQE-EMIGFSWATLTTILPACSRVAALLT 355
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H+ I + + N+L++MY KCG++ +FD++ KD SW ++ A
Sbjct: 356 GKEIHAQI-LKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYA 414
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV-PQM 179
+NG+ +E + LF M+ GV PD +TF+ LL CS GL G F+ M+ + V P +
Sbjct: 415 INGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPAL 474
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HY C+VD+ GRAG +EA + M + IWG+L
Sbjct: 475 EHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSL 512
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 78/200 (39%), Gaps = 2/200 (1%)
Query: 9 WTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWVHSYI 68
W + + Y R G +A+ V+ M+ C EP + + +H+ I
Sbjct: 204 WAAMAIGYSRNGSPRDALIVYVDML-CSFIEPGNFSISVALKACVDLKDLRVGRGIHAQI 262
Query: 69 DTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEA 128
R + V + N LL +Y++ G +FD + ++ ++W ++I L+ E
Sbjct: 263 VKRKE-KVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEM 321
Query: 129 VQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDM 188
LF M + + T +L CS + G + S P + ++DM
Sbjct: 322 FNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDM 381
Query: 189 YGRAGLFEEAEAFLRAMLVE 208
YG+ G E + ML +
Sbjct: 382 YGKCGEVEYSRRVFDVMLTK 401
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 111/219 (50%), Gaps = 5/219 (2%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +D+I+W TL+ R EA+ +F Q + + PN T
Sbjct: 274 MEDKDLITWNTLISELERS-DSSEALLMF-QRFESQGFVPNCYTFTSLVAACANIAALNC 331
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIF-DMLEHKDFISWGTVICGL 119
Q +H I RG + NAL++MY KCG++ +F ++++ ++ +SW +++ G
Sbjct: 332 GQQLHGRIFRRG-FNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGY 390
Query: 120 AMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQ 178
+G+G EAV+LF M+ G++PD + F+ +L C H GLV +G +F M Y + P
Sbjct: 391 GSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPD 450
Query: 179 MRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
Y C+VD+ GRAG EA + M + + WGA+
Sbjct: 451 RDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAI 489
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 82/196 (41%), Gaps = 3/196 (1%)
Query: 4 RDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQW 63
++ ++WTTL+ + G + ++KQM+ AE +
Sbjct: 176 KNDVTWTTLITGFTHLGDGIGGLKMYKQML-LENAEVTPYCITIAVRASASIDSVTTGKQ 234
Query: 64 VHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNG 123
+H+ + RG + N++L++Y +CG + F +E KD I+W T+I L
Sbjct: 235 IHASVIKRG-FQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELE-RS 292
Query: 124 HGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYG 183
EA+ +F QG P+ TF L+ C++ ++ G + +
Sbjct: 293 DSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELAN 352
Query: 184 CMVDMYGRAGLFEEAE 199
++DMY + G +++
Sbjct: 353 ALIDMYAKCGNIPDSQ 368
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 81/209 (38%), Gaps = 9/209 (4%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M RDV++WT ++ Y + A F +MV + PNE T
Sbjct: 71 MPDRDVVAWTAMITGYASSNYNARAWECFHEMVK-QGTSPNEFTLSSVLKSCRNMKVLAY 129
Query: 61 XQWVHSYI---DTRGDLVVGGNIGNALLNMYVKCG-DMHMGLTIFDMLEHKDFISWGTVI 116
VH + G L V NA++NMY C M IF ++ K+ ++W T+I
Sbjct: 130 GALVHGVVVKLGMEGSLYV----DNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLI 185
Query: 117 CGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV 176
G G G ++++ ML++ + + + V+ G ++
Sbjct: 186 TGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQ 245
Query: 177 PQMRHYGCMVDMYGRAGLFEEAEAFLRAM 205
+ ++D+Y R G EA+ + M
Sbjct: 246 SNLPVMNSILDLYCRCGYLSEAKHYFHEM 274
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 118 bits (296), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 102/214 (47%), Gaps = 2/214 (0%)
Query: 4 RDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQW 63
RDV+ W++++ Y G C E + + QM E N T
Sbjct: 316 RDVVMWSSMISGYAETGDCSEVMNLLNQMRK-EGIEANSVTLLAIVSACTNSTLLSFAST 374
Query: 64 VHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNG 123
VHS I G + +GNAL++MY KCG + +F L KD +SW ++I ++G
Sbjct: 375 VHSQILKCG-FMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHG 433
Query: 124 HGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYG 183
HG EA+++F M+ G + DD+ F+ +L C+H GLV E F ++ + HY
Sbjct: 434 HGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYA 493
Query: 184 CMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
C +++ GR G ++A M ++ IW +L
Sbjct: 494 CYINLLGRFGKIDDAFEVTINMPMKPSARIWSSL 527
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 91/219 (41%), Gaps = 6/219 (2%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXX-XX 59
M ++ +SWT ++ V + E V +F+ M PN T
Sbjct: 211 MEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQR-ENLRPNRVTLLSVLPACVELNYGSS 269
Query: 60 XXQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGL 119
+ +H + R + A + MY +CG++ + +F+ + +D + W ++I G
Sbjct: 270 LVKEIHGF-SFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGY 328
Query: 120 AMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQM 179
A G E + L + M +G++ + VT + ++ C++ L+S + + + +
Sbjct: 329 AETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHI 388
Query: 180 RHYGCMVDMYGRAGLFEEA-EAFLRAMLVEAEGPIWGAL 217
++DMY + G A E F L E + W ++
Sbjct: 389 LLGNALIDMYAKCGSLSAAREVFYE--LTEKDLVSWSSM 425
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 67/154 (43%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M RD +S+ +++ + + G EA+ + K+M +E
Sbjct: 108 MLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKV 167
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ H+ + + + AL++MY+K D +FD +E K+ +SW +I G
Sbjct: 168 ARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCV 227
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRC 154
N + + V LF M + ++P+ VT + +L C
Sbjct: 228 ANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPAC 261
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 118 bits (296), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 107/220 (48%), Gaps = 7/220 (3%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREA--EPNEATXXXXXXXXXXXXXX 58
M RD+ISW+T++ Y + G EE F M R++ +P +
Sbjct: 371 MRCRDIISWSTIIGGYCQAGFGEEGFKYFSWM---RQSGTKPTDFALASLLSVSGNMAVI 427
Query: 59 XXXQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICG 118
+ VH+ G L + ++L+NMY KCG + IF + D +S +I G
Sbjct: 428 EGGRQVHALALCFG-LEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMING 486
Query: 119 LAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVP 177
A +G KEA+ LF L G +PD VTFI +L C+H G + G +F M+++Y + P
Sbjct: 487 YAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRP 546
Query: 178 QMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HYGCMVD+ RAG +AE + M + + +W L
Sbjct: 547 AKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTL 586
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 95/200 (47%), Gaps = 4/200 (2%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
MS+RDV+SWT+L++AY R G +AV F +M + + PNE T
Sbjct: 270 MSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRN-SQVPPNEQTFASMFSACASLSRLVW 328
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H + + G L ++ N+++ MY CG++ +F + +D ISW T+I G
Sbjct: 329 GEQLHCNVLSLG-LNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYC 387
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
G G+E + FS M G +P D LL + ++ EG A+ + + Q
Sbjct: 388 QAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVI-EGGRQVHALALCFGLEQNS 446
Query: 181 HY-GCMVDMYGRAGLFEEAE 199
+++MY + G +EA
Sbjct: 447 TVRSSLINMYSKCGSIKEAS 466
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 83/205 (40%), Gaps = 2/205 (0%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M R+ ++WT ++ V G +E + F +M E + T
Sbjct: 169 MPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELS-DTYTFAIALKACAGLRQVKY 227
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H+++ RG V + N+L MY +CG+M GL +F+ + +D +SW ++I
Sbjct: 228 GKAIHTHVIVRG-FVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYK 286
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
G +AV+ F M V P++ TF + C+ + G + L +
Sbjct: 287 RIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLS 346
Query: 181 HYGCMVDMYGRAGLFEEAEAFLRAM 205
M+ MY G A + M
Sbjct: 347 VSNSMMKMYSTCGNLVSASVLFQGM 371
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 4/157 (2%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQM--VDCREAEPNEATXXXXXXXXXXXXXX 58
M D++SWT+++ YV + +EA+ +F M VD P+ +
Sbjct: 66 MPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVD-HAVSPDTSVLSVVLKACGQSSNI 124
Query: 59 XXXQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICG 118
+ +H+Y + L+ +G++LL+MY + G + +F + ++ ++W +I G
Sbjct: 125 AYGESLHAYA-VKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITG 183
Query: 119 LAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCS 155
L G KE + FS M D TF L C+
Sbjct: 184 LVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACA 220
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 2/119 (1%)
Query: 82 NALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLV--QG 139
N+ L + G++ +FD + H D +SW ++I + EA+ LFS M V
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 140 VQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEA 198
V PD +L C ++ G + L+ + ++DMY R G +++
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKS 162
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 118 bits (296), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 113/248 (45%), Gaps = 32/248 (12%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVD-------------------------- 34
M +D++SW L+ YV GH EA +FK+M +
Sbjct: 346 MPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLF 405
Query: 35 -C--REA-EPNEATXXXXXXXXXXXXXXXXXQWVHSYIDTRGDLVVGGNIGNALLNMYVK 90
C RE EP + Q H+ + G + GNAL+ MY K
Sbjct: 406 SCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIG-FDSSLSAGNALITMYAK 464
Query: 91 CGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGL 150
CG + +F + D +SW +I L +GHG EAV ++ ML +G++PD +T + +
Sbjct: 465 CGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTV 524
Query: 151 LCRCSHKGLVSEGTMFFKAMRDSYLVPQ-MRHYGCMVDMYGRAGLFEEAEAFLRAMLVEA 209
L CSH GLV +G +F +M Y +P HY ++D+ R+G F +AE+ + ++ +
Sbjct: 525 LTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKP 584
Query: 210 EGPIWGAL 217
IW AL
Sbjct: 585 TAEIWEAL 592
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 34/231 (14%)
Query: 6 VISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWVH 65
++++ ++ YV G +EA+ + ++MV E +E T + VH
Sbjct: 251 LVAYNAMISGYVNRGFYQEALEMVRRMVSS-GIELDEFTYPSVIRACATAGLLQLGKQVH 309
Query: 66 SYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTV---------- 115
+Y+ R D + N+L+++Y KCG IF+ + KD +SW +
Sbjct: 310 AYVLRREDFSF--HFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHI 367
Query: 116 ---------------------ICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRC 154
I GLA NG G+E ++LFS M +G +P D F G + C
Sbjct: 368 GEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSC 427
Query: 155 SHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAEAFLRAM 205
+ G G + + + ++ MY + G+ EEA R M
Sbjct: 428 AVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTM 478
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 118 bits (295), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 109/212 (51%), Gaps = 5/212 (2%)
Query: 7 ISWTTLVMAYVRGGHCEEAVAVFKQMVDCREA-EPNEATXXXXXXXXXXXXXXXXXQWVH 65
+SWT+L+ V+ G E A+ F++M+ R++ +PN T + +H
Sbjct: 334 VSWTSLISGLVQNGREEMALIEFRKMM--RDSIKPNSFTLSSALRGCSNLAMFEEGRQIH 391
Query: 66 SYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHG 125
+ T+ G+ L+++Y KCG M +FD L D IS T+I A NG G
Sbjct: 392 GIV-TKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFG 450
Query: 126 KEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCM 185
+EA+ LF M+ G+QP+DVT + +L C++ LV EG F + R ++ HY CM
Sbjct: 451 REALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHYACM 510
Query: 186 VDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
VD+ GRAG EEAE L ++ + +W L
Sbjct: 511 VDLLGRAGRLEEAE-MLTTEVINPDLVLWRTL 541
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 89/198 (44%), Gaps = 1/198 (0%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
MS+R +++W +L+ ++ +EAV +++ M+ P+E T
Sbjct: 125 MSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMI-TNNVLPDEYTLSSVFKAFSDLSLEKE 183
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
Q H G V +G+AL++MYVK G + D +E KD + +I G +
Sbjct: 184 AQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYS 243
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
G EAV+ F MLV+ VQP++ T+ +L C + + G + M S +
Sbjct: 244 QKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALA 303
Query: 181 HYGCMVDMYGRAGLFEEA 198
++ MY R L +++
Sbjct: 304 SQTSLLTMYLRCSLVDDS 321
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 89/194 (45%), Gaps = 4/194 (2%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ ++DV+ T L++ Y + G EAV F+ M+ + +PNE T
Sbjct: 227 VEEKDVVLITALIVGYSQKGEDTEAVKAFQSML-VEKVQPNEYTYASVLISCGNLKDIGN 285
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H + G +LL MY++C + L +F +E+ + +SW ++I GL
Sbjct: 286 GKLIHGLMVKSG-FESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLV 344
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
NG + A+ F M+ ++P+ T L CS+ + EG + Y + +
Sbjct: 345 QNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIH-GIVTKYGFDRDK 403
Query: 181 HYGC-MVDMYGRAG 193
+ G ++D+YG+ G
Sbjct: 404 YAGSGLIDLYGKCG 417
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 13/129 (10%)
Query: 81 GNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGV 140
G+ L++ +KCGD+ +FD + + ++W ++I L + KEAV+++ LM+ V
Sbjct: 102 GSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNV 161
Query: 141 QPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYL-------VPQMRHYGCMVDMYGRAG 193
PD+ T + S L E A R L V + +VDMY + G
Sbjct: 162 LPDEYTLSSVFKAFSDLSLEKE------AQRSHGLAVILGLEVSNVFVGSALVDMYVKFG 215
Query: 194 LFEEAEAFL 202
EA+ L
Sbjct: 216 KTREAKLVL 224
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 117 bits (294), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 109/218 (50%), Gaps = 4/218 (1%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMV--DCREAEPNEATXXXXXXXXXXXXXXXX 60
+RDV++WT ++ Y + G +A+ + +M DC + PN T
Sbjct: 437 ERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDC-QTRPNAFTISCALVACASLAALRI 495
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H+Y V + N L++MY KCG + +FD + K+ ++W +++ G
Sbjct: 496 GKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYG 555
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV-PQM 179
M+G+G+EA+ +F M G + D VT + +L CSH G++ +G +F M+ + V P
Sbjct: 556 MHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGP 615
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HY C+VD+ GRAG A + M +E +W A
Sbjct: 616 EHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAF 653
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Query: 80 IGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQ- 138
+GNAL+ MY +C + +FD + D +SW ++I A G K A+++FS M +
Sbjct: 164 VGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEF 223
Query: 139 GVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEA 198
G +PD++T + +L C+ G S G S ++ M C+VDMY + G+ +EA
Sbjct: 224 GCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEA 283
Query: 199 EAFLRAMLVE 208
M V+
Sbjct: 284 NTVFSNMSVK 293
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 85/178 (47%), Gaps = 1/178 (0%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
MS DV+SW +++ +Y + G + A+ +F +M + P+ T
Sbjct: 188 MSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSL 247
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H + T +++ +GN L++MY KCG M T+F + KD +SW ++ G +
Sbjct: 248 GKQLHCFAVT-SEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYS 306
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQ 178
G ++AV+LF M + ++ D VT+ + + +GL E + M S + P
Sbjct: 307 QIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPN 364
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 93/217 (42%), Gaps = 12/217 (5%)
Query: 5 DVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWV 64
DV++W+ + Y + G EA+ V +QM+ +PNE T + +
Sbjct: 329 DVVTWSAAISGYAQRGLGYEALGVCRQMLS-SGIKPNEVTLISVLSGCASVGALMHGKEI 387
Query: 65 HSY-IDTRGDLVVGGN-----IGNALLNMYVKCGDMHMGLTIFDMLEHK--DFISWGTVI 116
H Y I DL G+ + N L++MY KC + +FD L K D ++W +I
Sbjct: 388 HCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMI 447
Query: 117 CGLAMNGHGKEAVQLFSLMLVQGVQ--PDDVTFIGLLCRCSHKGLVSEGTMFFK-AMRDS 173
G + +G +A++L S M + Q P+ T L C+ + G A+R+
Sbjct: 448 GGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQ 507
Query: 174 YLVPQMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAE 210
+ C++DMY + G +A M+ + E
Sbjct: 508 QNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNE 544
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 117 bits (293), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 112/219 (51%), Gaps = 4/219 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M + ++SW T++ Y++ G + A+ VF+QMV + +
Sbjct: 557 MEDKSLVSWNTVITGYLQNGFPDRALGVFRQMV-LYGIQLCGISMMPVFGACSLLPSLRL 615
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ H+Y + L I +L++MY K G + +F+ L+ K SW +I G
Sbjct: 616 GREAHAYA-LKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYG 674
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQM 179
++G KEA++LF M G PDD+TF+G+L C+H GL+ EG + M+ S+ L P +
Sbjct: 675 IHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNL 734
Query: 180 RHYGCMVDMYGRAGLFEEA-EAFLRAMLVEAEGPIWGAL 217
+HY C++DM GRAG ++A M EA+ IW +L
Sbjct: 735 KHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSL 773
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 8/166 (4%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCR---EAEPNEATXXXXXXXXXXXXX 57
M +R+++SW +++ + G EE+ + +M++ P+ AT
Sbjct: 248 MPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARERE 307
Query: 58 XXXXQWVHSY-IDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVI 116
+ VH + + R D + N NAL++MY KCG + IF M +K+ +SW T++
Sbjct: 308 IGLGKGVHGWAVKLRLDKELVLN--NALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMV 365
Query: 117 CGLAMNGHGKEAVQLFSLMLVQG--VQPDDVTFIGLLCRCSHKGLV 160
G + G + ML G V+ D+VT + + C H+ +
Sbjct: 366 GGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFL 411
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/207 (20%), Positives = 85/207 (41%), Gaps = 5/207 (2%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ +++ W ++ +Y R +E + F +M+ + P+ T
Sbjct: 146 LRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGI 205
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
VH + G LV +GNAL++ Y G + L +FD++ ++ +SW ++I +
Sbjct: 206 GLAVHGLVVKTG-LVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFS 264
Query: 121 MNGHGKEAVQLFSLMLVQ----GVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV 176
NG +E+ L M+ + PD T + +L C+ + + G L
Sbjct: 265 DNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLD 324
Query: 177 PQMRHYGCMVDMYGRAGLFEEAEAFLR 203
++ ++DMY + G A+ +
Sbjct: 325 KELVLNNALMDMYSKCGCITNAQMIFK 351
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 80/205 (39%), Gaps = 2/205 (0%)
Query: 2 SQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCRE-AEPNEATXXXXXXXXXXXXXXXX 60
+ ++V+SW T+V + G V +QM+ E + +E T
Sbjct: 354 NNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPS 413
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H Y + + V + NA + Y KCG + +F + K SW +I G A
Sbjct: 414 LKELHCY-SLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHA 472
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
+ + ++ M + G+ PD T LL CS + G + ++L +
Sbjct: 473 QSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLF 532
Query: 181 HYGCMVDMYGRAGLFEEAEAFLRAM 205
Y ++ +Y G +A AM
Sbjct: 533 VYLSVLSLYIHCGELCTVQALFDAM 557
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 3/136 (2%)
Query: 83 ALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQP 142
++L++Y+ CG++ +FD +E K +SW TVI G NG A+ +F M++ G+Q
Sbjct: 536 SVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQL 595
Query: 143 DDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGC-MVDMYGRAGLFEEAEAF 201
++ + + CS + G A +L+ C ++DMY + G ++
Sbjct: 596 CGISMMPVFGACSLLPSLRLGRE-AHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKV 654
Query: 202 LRAMLVEAEGPIWGAL 217
L E W A+
Sbjct: 655 FNG-LKEKSTASWNAM 669
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 117 bits (293), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 115/223 (51%), Gaps = 15/223 (6%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREA--EPNEATXXXXXXXXXXXXXXXX 60
+R + SW ++ G EAV +F VD + + EP++ T
Sbjct: 180 ERKLGSWNAIIGGLNHAGRANEAVEMF---VDMKRSGLEPDDFTMVSVTASCGGLGDLSL 236
Query: 61 XQWVHSYI-----DTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTV 115
+H + + + D++ + N+L++MY KCG M + IF+ + ++ +SW ++
Sbjct: 237 AFQLHKCVLQAKTEEKSDIM----MLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSM 292
Query: 116 ICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY- 174
I G A NG+ EA++ F M GV+P+ +TF+G+L C H GLV EG +F M+ +
Sbjct: 293 IVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFE 352
Query: 175 LVPQMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
L P + HYGC+VD+ R G +EA+ + M ++ +WG L
Sbjct: 353 LEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCL 395
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 78/199 (39%), Gaps = 4/199 (2%)
Query: 9 WTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWVHSYI 68
W ++ +Y+R +A+ V+ MV P+ + + +HS +
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRS-TVLPDRYSLPIVIKAAVQIHDFTLGKELHS-V 142
Query: 69 DTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEA 128
R V + + +Y K G+ +FD + SW +I GL G EA
Sbjct: 143 AVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEA 202
Query: 129 VQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQ--MRHYGCMV 186
V++F M G++PDD T + + C G +S K + + + + ++
Sbjct: 203 VEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLI 262
Query: 187 DMYGRAGLFEEAEAFLRAM 205
DMYG+ G + A M
Sbjct: 263 DMYGKCGRMDLASHIFEEM 281
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 117 bits (293), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 115/218 (52%), Gaps = 3/218 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ ++ +ISW++L++ Y + G EA+ +FK++ + + A
Sbjct: 273 IKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQG 332
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
Q + L ++ N++++MY+KCG + F ++ KD ISW VI G
Sbjct: 333 KQMQALAVKLPSGLET--SVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYG 390
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQM 179
+G GK++V++F ML ++PD+V ++ +L CSH G++ EG F + +++ + P++
Sbjct: 391 KHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRV 450
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HY C+VD+ GRAG +EA+ + M ++ IW L
Sbjct: 451 EHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTL 488
Score = 80.1 bits (196), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 99/207 (47%), Gaps = 9/207 (4%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +R+V+SW+ L+ +V G + ++++F +M + PNE T
Sbjct: 67 MPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGR-QGIYPNEFTFSTNLKACGLLNALEK 125
Query: 61 XQWVHSYIDTRG-DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGL 119
+H + G +++V +GN+L++MY KCG ++ +F + + ISW +I G
Sbjct: 126 GLQIHGFCLKIGFEMMV--EVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGF 183
Query: 120 AMNGHGKEAVQLFSLMLVQGVQ--PDDVTFIGLLCRCSHKGLVSEGTMFFKAM-RDSYLV 176
G+G +A+ F +M ++ PD+ T LL CS G++ G + R +
Sbjct: 184 VHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHC 243
Query: 177 PQMRHY-GCMVDMYGRAG-LFEEAEAF 201
P G +VD+Y + G LF +AF
Sbjct: 244 PSSATITGSLVDLYVKCGYLFSARKAF 270
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 83/204 (40%), Gaps = 2/204 (0%)
Query: 4 RDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAE-PNEATXXXXXXXXXXXXXXXXXQ 62
R +ISW ++ +V G+ +A+ F M + E P+E T +
Sbjct: 171 RSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGK 230
Query: 63 WVHSYIDTRG-DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAM 121
+H ++ G I +L+++YVKCG + FD ++ K ISW ++I G A
Sbjct: 231 QIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQ 290
Query: 122 NGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRH 181
G EA+ LF + Q D ++ + L+ +G +
Sbjct: 291 EGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSV 350
Query: 182 YGCMVDMYGRAGLFEEAEAFLRAM 205
+VDMY + GL +EAE M
Sbjct: 351 LNSVVDMYLKCGLVDEAEKCFAEM 374
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 5/145 (3%)
Query: 64 VHSYIDTRGDLVVGGNI--GNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAM 121
VH Y+ G G N+ N L++MY KC + M +FD + ++ +SW ++ G +
Sbjct: 28 VHCYLLKSGS---GLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVL 84
Query: 122 NGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRH 181
NG K ++ LFS M QG+ P++ TF L C + +G +
Sbjct: 85 NGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEV 144
Query: 182 YGCMVDMYGRAGLFEEAEAFLRAML 206
+VDMY + G EAE R ++
Sbjct: 145 GNSLVDMYSKCGRINEAEKVFRRIV 169
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 106/220 (48%), Gaps = 8/220 (3%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
MS D+ +W+ +V Y EA+ VF++ + R PN T
Sbjct: 528 MSTTDLTTWSLMVRIYAESCCPNEAIGVFRE-IQARGMRPNTVTIMNLLPVCAQLASLHL 586
Query: 61 XQWVHSYIDTRGDLVVGGNI--GNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICG 118
+ H YI RG L G+I LL++Y KCG + ++F +D + + ++ G
Sbjct: 587 VRQCHGYI-IRGGL---GDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAG 642
Query: 119 LAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVP 177
A++G GKEA+ ++S M ++PD V +L C H GL+ +G + ++R + + P
Sbjct: 643 YAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKP 702
Query: 178 QMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
M Y C VD+ R G ++A +F+ M VE IWG L
Sbjct: 703 TMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTL 742
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 87/198 (43%), Gaps = 6/198 (3%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXX---XXXXXXXX 57
++ +DV+SW ++ + +A F M+ EPN AT
Sbjct: 184 IADKDVVSWNAIIAGFSENNMMADAFRSFCLMLK-EPTEPNYATIANVLPVCASMDKNIA 242
Query: 58 XXXXQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVIC 117
+ +HSY+ R L + N+L++ Y++ G + ++F + KD +SW VI
Sbjct: 243 CRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIA 302
Query: 118 GLAMNGHGKEAVQLFSLMLVQG-VQPDDVTFIGLLCRCSH-KGLVSEGTMFFKAMRDSYL 175
G A N +A QLF ++ +G V PD VT I +L C+ L S + +R SYL
Sbjct: 303 GYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYL 362
Query: 176 VPQMRHYGCMVDMYGRAG 193
+ ++ Y R G
Sbjct: 363 LEDTSVGNALISFYARFG 380
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 66/154 (42%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +D++SW ++ Y +A +F +V + P+ T
Sbjct: 289 MGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLAS 348
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +HSYI L+ ++GNAL++ Y + GD F ++ KD ISW ++ A
Sbjct: 349 GKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFA 408
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRC 154
+ + + L +L + + D VT + LL C
Sbjct: 409 DSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFC 442
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 88/210 (41%), Gaps = 7/210 (3%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M D + W +V+ + E + FK M E +P+ T
Sbjct: 82 MDSLDPVVWN-IVLTGLSVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYN 140
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHM-GLTIFDMLEHKDFISWGTVICGL 119
+ +HSYI G L +GNAL++MY K G + T FD + KD +SW +I G
Sbjct: 141 GKSMHSYIIKAG-LEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGF 199
Query: 120 AMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSH--KGLV--SEGTMFFKAMRDSYL 175
+ N +A + F LML + +P+ T +L C+ K + S + ++ S+L
Sbjct: 200 SENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWL 259
Query: 176 VPQMRHYGCMVDMYGRAGLFEEAEAFLRAM 205
+ +V Y R G EEA + M
Sbjct: 260 QTHVFVCNSLVSFYLRVGRIEEAASLFTRM 289
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 109/220 (49%), Gaps = 7/220 (3%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQM--VDCREAEPNEATXXXXXXXXXXXXXX 58
+ + +ISW ++ + + G E + F QM +D E + ++
Sbjct: 410 IENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELG 469
Query: 59 XXXQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICG 118
+ + D VV ++L+++Y KCG + G +FD + D + W ++I G
Sbjct: 470 EQVFARATIVGLDSDQVVS----SSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISG 525
Query: 119 LAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMR-DSYLVP 177
A NG G EA+ LF M V G++P +TF+ +L C++ GLV EG F++M+ D VP
Sbjct: 526 YATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVP 585
Query: 178 QMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
H+ CMVD+ RAG EEA + M + +G +W ++
Sbjct: 586 DKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSI 625
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 58/136 (42%), Gaps = 1/136 (0%)
Query: 82 NALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQ 141
N+++ +Y CG + +F+ +E+K ISW ++ G + NG E ++ F M +
Sbjct: 388 NSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLP 447
Query: 142 PDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAEAF 201
D+V+ ++ C+ + G F L ++D+Y + G E
Sbjct: 448 TDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRV 507
Query: 202 LRAMLVEAEGPIWGAL 217
M+ E P W ++
Sbjct: 508 FDTMVKSDEVP-WNSM 522
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 91/239 (38%), Gaps = 44/239 (18%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M ++DV++ +L+ Y+ G+ EEA+ +FK++ + T
Sbjct: 150 MPEKDVVTLNSLLHGYILNGYAEEALRLFKEL----NFSADAITLTTVLKACAELEALKC 205
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLT--------------------- 99
+ +H+ I G + + ++L+N+Y KCGD+ M
Sbjct: 206 GKQIHAQI-LIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYA 264
Query: 100 ----------IFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIG 149
+FD ++ I W ++I G N EA+ LF+ M + + D T
Sbjct: 265 NCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNE-TREDSRTLAA 323
Query: 150 LLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAG-------LFEEAEAF 201
++ C G + G L+ + ++DMY + G LF E E++
Sbjct: 324 VINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESY 382
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 101/199 (50%), Gaps = 4/199 (2%)
Query: 2 SQRDVI-SWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+Q+DV SW ++ +Y+ G+ +AV V+ QMV +P+ T
Sbjct: 370 TQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSV-GVKPDVVTFTSVLPACSQLAALEK 428
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H I + L + +ALL+MY KCG+ IF+ + KD +SW +I
Sbjct: 429 GKQIHLSI-SESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYG 487
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQM 179
+G +EA+ F M G++PD VT + +L C H GL+ EG FF MR Y + P +
Sbjct: 488 SHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPII 547
Query: 180 RHYGCMVDMYGRAGLFEEA 198
HY CM+D+ GRAG EA
Sbjct: 548 EHYSCMIDILGRAGRLLEA 566
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 93/201 (46%), Gaps = 4/201 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M ++ +++W +++ YV G + V + +M+ P++ T
Sbjct: 269 MPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMI-IEGTRPSQTTLTSILMACSRSRNLLH 327
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+++H Y+ R + + +L+++Y KCG+ ++ T+F + SW +I
Sbjct: 328 GKFIHGYV-IRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYI 386
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
G+ +AV+++ M+ GV+PD VTF +L CS + +G ++ +S L
Sbjct: 387 SVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDEL 446
Query: 181 HYGCMVDMYGRAGLFEEAEAF 201
++DMY + G E EAF
Sbjct: 447 LLSALLDMYSKCG--NEKEAF 465
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 88/200 (44%), Gaps = 2/200 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +RDV SW T++ + + G E+A+ +F +M + EPN +
Sbjct: 168 MPERDVASWNTVISCFYQSGEAEKALELFGRM-ESSGFEPNSVSLTVAISACSRLLWLER 226
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H +G + + +AL++MY KC + + +F + K ++W ++I G
Sbjct: 227 GKEIHRKCVKKG-FELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYV 285
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
G K V++ + M+++G +P T +L CS + G + S + +
Sbjct: 286 AKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIY 345
Query: 181 HYGCMVDMYGRAGLFEEAEA 200
++D+Y + G AE
Sbjct: 346 VNCSLIDLYFKCGEANLAET 365
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 91/207 (43%), Gaps = 9/207 (4%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
+ DV W +L+ Y + + + VFK++++C P+ T +
Sbjct: 68 RSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGR 127
Query: 63 WVHSYIDTRG---DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGL 119
+H+ + G D+VV ++L+ MY K L +FD + +D SW TVI
Sbjct: 128 MIHTLVVKSGYVCDVVVA----SSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCF 183
Query: 120 AMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGT-MFFKAMRDSYLVPQ 178
+G ++A++LF M G +P+ V+ + CS + G + K ++ + + +
Sbjct: 184 YQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDE 243
Query: 179 MRHYGCMVDMYGRAGLFEEAEAFLRAM 205
+ +VDMYG+ E A + M
Sbjct: 244 YVN-SALVDMYGKCDCLEVAREVFQKM 269
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 109/217 (50%), Gaps = 7/217 (3%)
Query: 4 RDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQW 63
RD+I W ++ YV+ G +E + ++ M R P++ T +
Sbjct: 172 RDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIV-PDQYTFASVFRACSALDRLEHGKR 230
Query: 64 VHSYIDTRGDLVVGGNI--GNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAM 121
H+ + R + NI +AL++MY KC G +FD L ++ I+W ++I G
Sbjct: 231 AHAVMIKR---CIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGY 287
Query: 122 NGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQMR 180
+G E ++ F M +G +P+ VTF+ +L C+H GLV +G F +M+ Y + P+ +
Sbjct: 288 HGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQ 347
Query: 181 HYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HY MVD GRAG +EA F+ + P+WG+L
Sbjct: 348 HYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSL 384
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 109/217 (50%), Gaps = 5/217 (2%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
++ +SW +++ AY + +EAV +F +M + +P+ T
Sbjct: 371 EKHTVSWNSIIAAYEKNKDYKEAVDLFIRM-NIEGEKPDPHTLTSLLSASTGLVNLRLGM 429
Query: 63 WVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLE-HKDFISWGTVICGLAM 121
+H + ++ + NAL+ MY +CG++ IFD ++ ++ I+W +I G A
Sbjct: 430 QMHQIVVK--TVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAF 487
Query: 122 NGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV-PQMR 180
+G+ EA+ LF M G+ P +TF+ +L C+H GLV E F +M Y + PQM
Sbjct: 488 HGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQME 547
Query: 181 HYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HY +V++ G FEEA + +M E + +WGAL
Sbjct: 548 HYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGAL 584
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 86/218 (39%), Gaps = 44/218 (20%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M RD ISW T++ YV E+A A+F +M PN
Sbjct: 307 MKDRDTISWNTMIDGYVHVSRMEDAFALFSEM-------PNRDA---------------- 343
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
HS+ N +++ Y G++ + F+ K +SW ++I
Sbjct: 344 ----HSW--------------NMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYE 385
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVS-EGTMFFKAMRDSYLVPQM 179
N KEAV LF M ++G +PD T LL + GLV+ M + ++P +
Sbjct: 386 KNKDYKEAVDLFIRMNIEGEKPDPHTLTSLL--SASTGLVNLRLGMQMHQIVVKTVIPDV 443
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+ ++ MY R G E+ M ++ E W A+
Sbjct: 444 PVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAM 481
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 114/219 (52%), Gaps = 10/219 (4%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ +D +SW +++ Y+ G EA+ +F+ MV EP++
Sbjct: 256 IPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQ-NGIEPDKVAISSVLARVLSFKHG-- 312
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H ++ RG + ++ NAL+ +Y K G + IFD + +D +SW +I +
Sbjct: 313 -RQLHGWVIRRG-MEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHS 370
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQM 179
N +G ++ F M +PD +TF+ +L C++ G+V +G F M Y + P+M
Sbjct: 371 KNSNG---LKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKM 427
Query: 180 RHYGCMVDMYGRAGLFEEAEAFL-RAMLVEAEGPIWGAL 217
HY CMV++YGRAG+ EEA + + + M +EA +WGAL
Sbjct: 428 EHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGAL 466
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 80/160 (50%), Gaps = 14/160 (8%)
Query: 1 MSQRDV--ISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXX 58
MS+RD +W +L+ Y G E+A+A++ QM + +P+ T
Sbjct: 153 MSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAE-DGVKPDRFTFPRVLKACGGIGSV 211
Query: 59 XXXQWVHSYIDTRGDLVVGG-----NIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWG 113
+ +H DLV G + NAL+ MY KCGD+ +FDM+ HKD++SW
Sbjct: 212 QIGEAIHR------DLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWN 265
Query: 114 TVICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCR 153
+++ G +G EA+ +F LM+ G++PD V +L R
Sbjct: 266 SMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLAR 305
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 80 IGNALLNMYVKCGDMHMGLTIFDMLEHKDF--ISWGTVICGLAMNGHGKEAVQLFSLMLV 137
I + L+ +Y CG + +FD + +D +W ++I G A G ++A+ L+ M
Sbjct: 129 ISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAE 188
Query: 138 QGVQPDDVTFIGLLCRCS-----------HKGLVSEG 163
GV+PD TF +L C H+ LV EG
Sbjct: 189 DGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEG 225
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 108/216 (50%), Gaps = 3/216 (1%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
QR+ +W ++ Y++ G +EA+ +F++M R PN T +
Sbjct: 486 QRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFM-PNSVTILSLLPACANLLGAKMVR 544
Query: 63 WVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMN 122
+H + R +L + NAL + Y K GD+ TIF +E KD I+W ++I G ++
Sbjct: 545 EIHGCV-LRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLH 603
Query: 123 GHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEG-TMFFKAMRDSYLVPQMRH 181
G A+ LF+ M QG+ P+ T ++ G V EG +F+ D +++P + H
Sbjct: 604 GSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEH 663
Query: 182 YGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
MV +YGRA EEA F++ M +++E PIW +
Sbjct: 664 CSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESF 699
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 90/202 (44%), Gaps = 3/202 (1%)
Query: 5 DVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWV 64
DV +WT ++ + G +A+ +F++M PN T V
Sbjct: 316 DVFTWTAMISGLIHNGMRYQALDMFRKMF-LAGVVPNAVTIMSAVSACSCLKVINQGSEV 374
Query: 65 HSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGH 124
HS I + + +GN+L++MY KCG + +FD +++KD +W ++I G G+
Sbjct: 375 HS-IAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGY 433
Query: 125 GKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAM-RDSYLVPQMRHYG 183
+A +LF+ M ++P+ +T+ ++ G E F+ M +D + +
Sbjct: 434 CGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWN 493
Query: 184 CMVDMYGRAGLFEEAEAFLRAM 205
++ Y + G +EA R M
Sbjct: 494 LIIAGYIQNGKKDEALELFRKM 515
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%)
Query: 80 IGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQG 139
+ LL+MY KCG + +FD + ++ +W +I + +E +LF LM+ G
Sbjct: 117 VETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDG 176
Query: 140 VQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAE 199
V PDD F +L C++ G V G + + + +R ++ +Y + G + A
Sbjct: 177 VLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFAT 236
Query: 200 AFLRAM 205
F R M
Sbjct: 237 KFFRRM 242
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 67/147 (45%), Gaps = 2/147 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +R++ +W+ ++ AY R E +F+ M+ P++
Sbjct: 141 MRERNLFTWSAMIGAYSRENRWREVAKLFRLMMK-DGVLPDDFLFPKILQGCANCGDVEA 199
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +HS + G + + N++L +Y KCG++ F + +D I+W +V+
Sbjct: 200 GKVIHSVVIKLG-MSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYC 258
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTF 147
NG +EAV+L M +G+ P VT+
Sbjct: 259 QNGKHEEAVELVKEMEKEGISPGLVTW 285
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 105/206 (50%), Gaps = 10/206 (4%)
Query: 4 RDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQW 63
RD +SW L+ R G E+A++ F+ M EA+P++ T +
Sbjct: 460 RDEVSWNALLTGVARVGRSEQALSFFEGMQ--VEAKPSKYTLATLLAGCANIPALNLGKA 517
Query: 64 VHSYIDTRG---DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+H ++ G D+V+ G A+++MY KC + +F +D I W ++I G
Sbjct: 518 IHGFLIRDGYKIDVVIRG----AMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCC 573
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQM 179
NG KE +LF L+ +GV+PD VTF+G+L C +G V G +F +M Y + PQ+
Sbjct: 574 RNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQV 633
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAM 205
HY CM+++Y + G + E FL M
Sbjct: 634 EHYDCMIELYCKYGCLHQLEEFLLLM 659
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 96/247 (38%), Gaps = 43/247 (17%)
Query: 7 ISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWVHS 66
+SW +V Y+ G +EAV +F +M++ P T + +H+
Sbjct: 229 VSWNVIVRRYLEMGFNDEAVVMFFKMLEL-NVRPLNHTVSSVMLACSRSLALEVGKVIHA 287
Query: 67 YIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGK 126
I + +V + ++ +MYVKC + +FD KD SW + + G AM+G +
Sbjct: 288 -IAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTR 346
Query: 127 EAVQLFSLMLVQGV-------------------------------QPDDVTFIGLLCRCS 155
EA +LF LM + + D+VT + +L CS
Sbjct: 347 EARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCS 406
Query: 156 -----HKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAE 210
G + G ++ + +V ++DMYG+ G + A + R M +
Sbjct: 407 GISDVQMGKQAHGFIYRHGYDTNVIVA-----NALLDMYGKCGTLQSANIWFRQMSELRD 461
Query: 211 GPIWGAL 217
W AL
Sbjct: 462 EVSWNAL 468
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 89/207 (42%), Gaps = 7/207 (3%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +R+++SW ++ YV +EA+ M E N T
Sbjct: 355 MPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDN-VTLVWILNVCSGISDVQM 413
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIF-DMLEHKDFISWGTVICGL 119
+ H +I G + NALL+MY KCG + F M E +D +SW ++ G+
Sbjct: 414 GKQAHGFIYRHG-YDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGV 472
Query: 120 AMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAM-RDSYLVPQ 178
A G ++A+ F M V+ +P T LL C++ ++ G + RD Y +
Sbjct: 473 ARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDV 531
Query: 179 MRHYGCMVDMYGRAGLFEEA-EAFLRA 204
+ G MVDMY + F+ A E F A
Sbjct: 532 VIR-GAMVDMYSKCRCFDYAIEVFKEA 557
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 110/219 (50%), Gaps = 4/219 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M R++++W TL+M + G C E V +M+ PN+ T
Sbjct: 152 MPVRNLVAWNTLIMGNAQNG-CPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQ 210
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
Q +H+ G + ++L++MY KCG + F E +D + W ++I
Sbjct: 211 GQQIHAEAIKIG-ASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYG 269
Query: 121 MNGHGKEAVQLFSLMLVQ-GVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQ 178
+G G EA++LF+ M Q ++ ++V F+ LL CSH GL +G F M + Y P
Sbjct: 270 FHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPG 329
Query: 179 MRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
++HY C+VD+ GRAG ++AEA +R+M ++ + IW L
Sbjct: 330 LKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTL 368
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 92/205 (44%), Gaps = 9/205 (4%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M R + +W ++ ++ EE +++F++M + P+E T
Sbjct: 51 MPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFS-PDEYTLGSVFSGSAGLRSVSI 109
Query: 61 XQWVHSYIDTRG---DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVIC 117
Q +H Y G DLVV ++L +MY++ G + G + + ++ ++W T+I
Sbjct: 110 GQQIHGYTIKYGLELDLVVN----SSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIM 165
Query: 118 GLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVP 177
G A NG + + L+ +M + G +P+ +TF+ +L CS + +G
Sbjct: 166 GNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASS 225
Query: 178 QMRHYGCMVDMYGRAG-LFEEAEAF 201
+ ++ MY + G L + A+AF
Sbjct: 226 VVAVVSSLISMYSKCGCLGDAAKAF 250
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 52/127 (40%)
Query: 81 GNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGV 140
N L+N YV+ GD+ +FD + + +W +I GL +E + LF M G
Sbjct: 28 SNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGF 87
Query: 141 QPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAEA 200
PD+ T + + VS G L + + MY R G ++ E
Sbjct: 88 SPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEI 147
Query: 201 FLRAMLV 207
+R+M V
Sbjct: 148 VIRSMPV 154
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 113 bits (283), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 107/217 (49%), Gaps = 8/217 (3%)
Query: 4 RDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREA--EPNEATXXXXXXXXXXXXXXXXX 61
+ +SW +L+ + + G +A F+ +V+ + +P+ T
Sbjct: 281 KTAVSWGSLISGFAQNGLANKA---FEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTG 337
Query: 62 QWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAM 121
+ VH YI R V+ AL++MY KCG + IF+ + KD + W T+I +
Sbjct: 338 RLVHCYILKRH--VLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGI 395
Query: 122 NGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV-PQMR 180
+G+G+E V LF M ++PD TF LL SH GLV +G +F M + Y + P +
Sbjct: 396 HGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEK 455
Query: 181 HYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HY C++D+ RAG EEA + + ++ PIW AL
Sbjct: 456 HYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVAL 492
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 3/199 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M++RDVI WTT+V + + G +AV +++M + +
Sbjct: 177 MAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQN-EGFGRDRVVMLGLLQASGDLGDTKM 235
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ VH Y+ R L + + +L++MY K G + + +F + K +SWG++I G A
Sbjct: 236 GRSVHGYL-YRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFA 294
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
NG +A + M G QPD VT +G+L CS G + G + + +++ ++
Sbjct: 295 QNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVT 354
Query: 181 HYGCMVDMYGRAGLFEEAE 199
M DMY + G +
Sbjct: 355 ATALM-DMYSKCGALSSSR 372
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 11/221 (4%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ QR V + ++++ Y RG + +E + ++ QM+ + +P+ +T
Sbjct: 76 LPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMI-AEKIQPDSSTFTMTIKACLSGLVLEK 134
Query: 61 XQ--WVHSY-IDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVIC 117
+ W + + D+ V ++ LN+Y+KCG M +F + +D I W T++
Sbjct: 135 GEAVWCKAVDFGYKNDVFVCSSV----LNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVT 190
Query: 118 GLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVP 177
G A G +AV+ + M +G D V +GLL G G + + L
Sbjct: 191 GFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPM 250
Query: 178 QMRHYGCMVDMYGRAGLFEEA-EAFLRAMLVEAEGPIWGAL 217
+ +VDMY + G E A F R M A WG+L
Sbjct: 251 NVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVS--WGSL 289
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 108/217 (49%), Gaps = 3/217 (1%)
Query: 2 SQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXX 61
S++D+ SWT+++ +V+ E A +F+Q+ P E T
Sbjct: 420 SKQDIASWTSMIDCHVQNEQLESAFDLFRQLFS-SHIRPEEYTVSLMMSACADFAALSSG 478
Query: 62 QWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAM 121
+ + Y G + ++ + ++MY K G+M + +F +++ D ++ +I LA
Sbjct: 479 EQIQGYAIKSG-IDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQ 537
Query: 122 NGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV-PQMR 180
+G EA+ +F M G++P+ F+G+L C H GLV++G +F+ M++ Y + P +
Sbjct: 538 HGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEK 597
Query: 181 HYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
H+ C+VD+ GR G +AE + + + W AL
Sbjct: 598 HFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRAL 634
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 91/203 (44%), Gaps = 9/203 (4%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREA--EPNEATXXXXXXXXXXXXXX 58
M +R++IS+ +L+ Y + G E+A+ +F ++ REA + ++ T
Sbjct: 108 MPERNIISFNSLISGYTQMGFYEQAMELF---LEAREANLKLDKFTYAGALGFCGERCDL 164
Query: 59 XXXQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICG 118
+ +H + G L + N L++MY KCG + +++FD + +D +SW ++I G
Sbjct: 165 DLGELLHGLVVVNG-LSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISG 223
Query: 119 LAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCS---HKGLVSEGTMFFKAMRDSYL 175
G +E + L + M G+ +L C ++G + +G +
Sbjct: 224 YVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGM 283
Query: 176 VPQMRHYGCMVDMYGRAGLFEEA 198
+ ++DMY + G +EA
Sbjct: 284 EFDIVVRTALLDMYAKNGSLKEA 306
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 118/218 (54%), Gaps = 3/218 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+S+ D+++ ++L+ Y R G+ +EA+ +F ++ +P+
Sbjct: 268 ISEPDLVACSSLITGYSRCGNHKEALHLFAEL-RMSGKKPDCVLVAIVLGSCAELSDSVS 326
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ VHSY+ R L + + +AL++MY KCG + +++F + K+ +S+ ++I GL
Sbjct: 327 GKEVHSYV-IRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLG 385
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQM 179
++G A + F+ +L G+ PD++TF LLC C H GL+++G F+ M+ + + PQ
Sbjct: 386 LHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQT 445
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HY MV + G AG EEA F+ ++ + I GAL
Sbjct: 446 EHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGAL 483
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 85/194 (43%), Gaps = 2/194 (1%)
Query: 5 DVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWV 64
D+ W +++ Y G ++ + +F M R +PN T V
Sbjct: 171 DLALWNVMILGYGCCGFWDKGINLFNLMQH-RGHQPNCYTMVALTSGLIDPSLLLVAWSV 229
Query: 65 HSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGH 124
H++ + +L +G AL+NMY +C + ++F+ + D ++ ++I G + G+
Sbjct: 230 HAFC-LKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGN 288
Query: 125 GKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGC 184
KEA+ LF+ + + G +PD V +L C+ G + L ++
Sbjct: 289 HKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSA 348
Query: 185 MVDMYGRAGLFEEA 198
++DMY + GL + A
Sbjct: 349 LIDMYSKCGLLKCA 362
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 113/217 (52%), Gaps = 2/217 (0%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M QR+V++W+ ++ Y + G EEA+ +FK+ + N+ +
Sbjct: 177 MPQRNVVTWSGMMYGYAQMGENEEALWLFKEAL-FENLAVNDYSFSSVISVCANSTLLEL 235
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H + + +G++L+++Y KCG +F+ + K+ W ++ A
Sbjct: 236 GRQIHG-LSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYA 294
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
+ H ++ ++LF M + G++P+ +TF+ +L CSH GLV EG +F M++S + P +
Sbjct: 295 QHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDK 354
Query: 181 HYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HY +VDM GRAG +EA + M ++ +WGAL
Sbjct: 355 HYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGAL 391
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 67/138 (48%), Gaps = 1/138 (0%)
Query: 80 IGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQG 139
+G++L++MY KCG++ +FD + ++ ++W ++ G A G +EA+ LF L +
Sbjct: 153 VGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFEN 212
Query: 140 VQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAE 199
+ +D +F ++ C++ L+ G S +V +Y + G+ E A
Sbjct: 213 LAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAY 272
Query: 200 AFLRAMLVEAEGPIWGAL 217
+ V+ G IW A+
Sbjct: 273 QVFNEVPVKNLG-IWNAM 289
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 110/218 (50%), Gaps = 2/218 (0%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ + +ISW +++ V+ G A VF QM+ P+ T
Sbjct: 408 LQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNL 467
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H Y R + + AL++MY KCG+ ++F ++ +W ++I G +
Sbjct: 468 GKELHGY-TLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYS 526
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQM 179
++G A+ + M +G++PD++TF+G+L C+H G V EG + F+AM + + P +
Sbjct: 527 LSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTL 586
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+HY MV + GRA LF EA + M ++ + +WGAL
Sbjct: 587 QHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGAL 624
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 86/205 (41%), Gaps = 6/205 (2%)
Query: 4 RDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ- 62
RD+ + +L+ + + G + +F+ ++ PN T Q
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLR-SSLTPNHFTMSIFLQATTTSFNSFKLQV 69
Query: 63 -WVHSYIDTRG-DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
V +++ G D V + +LLN+Y+K G + +FD + +D + W +ICG +
Sbjct: 70 EQVQTHLTKSGLDRFV--YVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYS 127
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
NG+ +A +LF +ML QG P T + LL C G VS+G S L +
Sbjct: 128 RNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQ 187
Query: 181 HYGCMVDMYGRAGLFEEAEAFLRAM 205
++ Y + AE R M
Sbjct: 188 VKNALISFYSKCAELGSAEVLFREM 212
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 3/160 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +RD + W L+ Y R G+ +A +F M+ + P+ T
Sbjct: 111 MPERDTVVWNALICGYSRNGYECDAWKLFIVMLQ-QGFSPSATTLVNLLPFCGQCGFVSQ 169
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ VH + + L + + NAL++ Y KC ++ +F ++ K +SW T+I +
Sbjct: 170 GRSVHG-VAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYS 228
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLL-CRCSHKGL 159
+G +EA+ +F M + V+ VT I LL SH+ L
Sbjct: 229 QSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPL 268
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 8/146 (5%)
Query: 64 VHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNG 123
+H Y G L + N L+ MY K D+ L +F+ L+ ISW +VI G +G
Sbjct: 369 LHGYAIKSG-LCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSG 427
Query: 124 HGKEAVQLF-SLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFF-KAMRDSYLVPQMRH 181
A ++F +ML G+ PD +T LL CS ++ G +R+++ + +
Sbjct: 428 RASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNF---ENEN 484
Query: 182 YGC--MVDMYGRAGLFEEAEAFLRAM 205
+ C ++DMY + G +AE+ +++
Sbjct: 485 FVCTALIDMYAKCGNEVQAESVFKSI 510
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 4/204 (1%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCR-EAEPNEATXXXXXXXXXXXXXXXXX 61
++++ISW ++ + G E + F +++ P+ T
Sbjct: 449 RKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLG 508
Query: 62 QWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAM 121
H+Y+ G IGNAL+NMY +CG + L +F+ + KD +SW ++I +
Sbjct: 509 SQTHAYVLRHGQFK-ETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSR 567
Query: 122 NGHGKEAVQLFSLMLVQG-VQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQM 179
+G G+ AV + M +G V PD TF +L CSH GLV EG F +M + + ++ +
Sbjct: 568 HGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNV 627
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLR 203
H+ C+VD+ GRAG +EAE+ ++
Sbjct: 628 DHFSCLVDLLGRAGHLDEAESLVK 651
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 98/224 (43%), Gaps = 18/224 (8%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ ++D+++W T++ +Y + + A++V+K+M +P+E T
Sbjct: 349 LEEKDLVTWNTMISSYNQAKLGKSAMSVYKRM-HIIGVKPDEFTFGSLLATSLDLDVL-- 405
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ V + I G L I NAL++ Y K G + +F+ K+ ISW +I G
Sbjct: 406 -EMVQACIIKFG-LSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFY 463
Query: 121 MNGHGKEAVQLFSLMLVQGVQ--PDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVP- 177
NG E ++ FS +L V+ PD T LL C VS ++ + +Y++
Sbjct: 464 HNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSIC-----VSTSSLMLGSQTHAYVLRH 518
Query: 178 -QMRHY---GCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
Q + +++MY + G + + M E + W +L
Sbjct: 519 GQFKETLIGNALINMYSQCGTIQNSLEVFNQM-SEKDVVSWNSL 561
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%)
Query: 80 IGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQG 139
+ NA + MY D +F+ LE KD ++W T+I GK A+ ++ M + G
Sbjct: 325 VSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIG 384
Query: 140 VQPDDVTFIGLL 151
V+PD+ TF LL
Sbjct: 385 VKPDEFTFGSLL 396
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 108/215 (50%), Gaps = 7/215 (3%)
Query: 4 RDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQW 63
RD+++W ++ A+ E A+ +F Q+ + P+ T
Sbjct: 333 RDIVAWNGIITAFAVYDP-ERAIHLFGQLRQ-EKLSPDWYTFSSVLKACAGLVTARHALS 390
Query: 64 VHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNG 123
+H+ + +G + + N+L++ Y KCG + + + +FD ++ +D +SW +++ +++G
Sbjct: 391 IHAQV-IKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHG 449
Query: 124 HGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAM-RDSYLVPQMRHY 182
+ +F M + PD TFI LL CSH G V EG F++M +PQ+ HY
Sbjct: 450 QVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHY 506
Query: 183 GCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
C++DM RA F EAE ++ M ++ + +W AL
Sbjct: 507 ACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIAL 541
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 10/153 (6%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +R+V+SWT L+ YV+ G+ +E +F M+ PNE T
Sbjct: 122 MPERNVVSWTALITGYVQAGNEQEGFCLFSSMLS--HCFPNEFT----LSSVLTSCRYEP 175
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGD---MHMGLTIFDMLEHKDFISWGTVIC 117
+ VH G L + NA+++MY +C D + T+F+ ++ K+ ++W ++I
Sbjct: 176 GKQVHGLALKLG-LHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIA 234
Query: 118 GLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGL 150
GK+A+ +F M GV D T + +
Sbjct: 235 AFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNI 267
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 80 IGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQG 139
+ N L+NMY KCG++ +FD + ++ +SW +I G G+ +E LFS ML
Sbjct: 98 LANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHC 157
Query: 140 VQPDDVTFIGLLCRCSHK 157
P++ T +L C ++
Sbjct: 158 F-PNEFTLSSVLTSCRYE 174
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 111 bits (278), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 114/219 (52%), Gaps = 5/219 (2%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+S ++ +SW T+++ Y G +A ++F++ + + E T
Sbjct: 409 LSSKNEVSWNTVIVGYENLGEGGKAFSMFREALR-NQVSVTEVTFSSALGACASLASMDL 467
Query: 61 XQWVHSY-IDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGL 119
VH I T V + N+L++MY KCGD+ ++F+ +E D SW +I G
Sbjct: 468 GVQVHGLAIKTNNAKKVA--VSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGY 525
Query: 120 AMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAM-RDSYLVPQ 178
+ +G G++A+++ +M + +P+ +TF+G+L CS+ GL+ +G F++M RD + P
Sbjct: 526 STHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPC 585
Query: 179 MRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+ HY CMV + GR+G ++A + + E IW A+
Sbjct: 586 LEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAM 624
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 8/208 (3%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREA--EPNEATXXXXXXXXXXXXXX 58
M + DV+ W+ ++ + + G C EAV +F +M REA PNE T
Sbjct: 308 MPKNDVVPWSFMIARFCQNGFCNEAVDLFIRM---REAFVVPNEFTLSSILNGCAIGKCS 364
Query: 59 XXXQWVHSYIDTRG-DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVIC 117
+ +H + G DL + + NAL+++Y KC M + +F L K+ +SW TVI
Sbjct: 365 GLGEQLHGLVVKVGFDLDI--YVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIV 422
Query: 118 GLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVP 177
G G G +A +F L V +VTF L C+ + G +
Sbjct: 423 GYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAK 482
Query: 178 QMRHYGCMVDMYGRAGLFEEAEAFLRAM 205
++ ++DMY + G + A++ M
Sbjct: 483 KVAVSNSLIDMYAKCGDIKFAQSVFNEM 510
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 6/154 (3%)
Query: 4 RDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREA--EPNEATXXXXXXXXXXXXXXXXX 61
+D++ W +V YV G+ E+++ + M R A PN T
Sbjct: 210 KDIVVWAGIVSCYVENGYFEDSLKLLSCM---RMAGFMPNNYTFDTALKASIGLGAFDFA 266
Query: 62 QWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAM 121
+ VH I + V+ +G LL +Y + GDM +F+ + D + W +I
Sbjct: 267 KGVHGQI-LKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQ 325
Query: 122 NGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCS 155
NG EAV LF M V P++ T +L C+
Sbjct: 326 NGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCA 359
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 8/148 (5%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREA-EPNEATXXXXXXXXXXXXXXX 59
M +R+ +S+ TL Y C++ + ++ ++ RE E N
Sbjct: 110 MPERNNVSFVTLAQGYA----CQDPIGLYSRLH--REGHELNPHVFTSFLKLFVSLDKAE 163
Query: 60 XXQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGL 119
W+HS I G +G AL+N Y CG + T+F+ + KD + W ++
Sbjct: 164 ICPWLHSPIVKLG-YDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCY 222
Query: 120 AMNGHGKEAVQLFSLMLVQGVQPDDVTF 147
NG+ +++++L S M + G P++ TF
Sbjct: 223 VENGYFEDSLKLLSCMRMAGFMPNNYTF 250
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 110 bits (276), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 110/220 (50%), Gaps = 5/220 (2%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ +RDV+S T ++ Y + G EEA+ +F ++ PN T
Sbjct: 214 LPERDVVSCTAIIAGYAQLGLDEEALEMFHRL-HSEGMSPNYVTYASLLTALSGLALLDH 272
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ H ++ R +L + N+L++MY KCG++ +FD + + ISW ++ G +
Sbjct: 273 GKQAHCHV-LRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYS 331
Query: 121 MNGHGKEAVQLFSLMLVQG-VQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMR--DSYLVP 177
+G G+E ++LF LM + V+PD VT + +L CSH + G F M + P
Sbjct: 332 KHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKP 391
Query: 178 QMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HYGC+VDM GRAG +EA F++ M + + G+L
Sbjct: 392 GTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSL 431
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 23/227 (10%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +++V+SWT ++ Y + GH EA+ VF +M+ + +PNE T
Sbjct: 113 MPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRS-DGKPNEFTFATVLTSCIRASGLGL 171
Query: 61 XQWVHSYIDTRGDLVVGGN------IGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGT 114
+ +H L+V N +G++LL+MY K G + IF+ L +D +S
Sbjct: 172 GKQIHG-------LIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTA 224
Query: 115 VICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTM----FFKAM 170
+I G A G +EA+++F + +G+ P+ VT+ LL S L+ G +
Sbjct: 225 IIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRE 284
Query: 171 RDSYLVPQMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
Y V Q ++DMY + G A M E W A+
Sbjct: 285 LPFYAVLQ----NSLIDMYSKCGNLSYARRLFDNM-PERTAISWNAM 326
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 11/149 (7%)
Query: 62 QWVHSY-IDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
Q VH++ I TR + + LL Y KC + + D + K+ +SW +I +
Sbjct: 72 QRVHAHMIKTR--YLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYS 129
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGT----MFFKAMRDSYLV 176
GH EA+ +F+ M+ +P++ TF +L C + G + K DS++
Sbjct: 130 QTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIF 189
Query: 177 PQMRHYGCMVDMYGRAGLFEEAEAFLRAM 205
++DMY +AG +EA +
Sbjct: 190 VG----SSLLDMYAKAGQIKEAREIFECL 214
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 110 bits (276), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 114/221 (51%), Gaps = 6/221 (2%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +++ISW ++ AY+ + ++++F++MV + NE+T
Sbjct: 210 MPDKNIISWNIMISAYLGANNPGVSISLFREMVRA-GFQGNESTLVLLLNACGRSARLKE 268
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ VH+ + R L I AL++MY KC ++ + IFD L ++ ++W +I
Sbjct: 269 GRSVHASL-IRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHC 327
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV-PQM 179
++G + ++LF M+ ++PD+VTF+G+LC C+ GLVS+G ++ M D + + P
Sbjct: 328 LHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNF 387
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAML---VEAEGPIWGAL 217
H CM ++Y AG EEAE L+ + V E W L
Sbjct: 388 GHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANL 428
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 110 bits (275), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 109/214 (50%), Gaps = 4/214 (1%)
Query: 6 VISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWVH 65
V WT L+ Y E+A+++F M+ PN++T + +H
Sbjct: 291 VAVWTALLSGYSLNKKHEDALSIFSGMLR-NSILPNQSTFASGLNSCSALGTLDWGKEMH 349
Query: 66 SYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHG 125
+ + L +GN+L+ MY G+++ +++F + K +SW ++I G A +G G
Sbjct: 350 G-VAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRG 408
Query: 126 KEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRD--SYLVPQMRHYG 183
K A +F M+ +PD++TF GLL CSH G + +G F M +++ +++HY
Sbjct: 409 KWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYT 468
Query: 184 CMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
CMVD+ GR G +EAE + M+V+ +W AL
Sbjct: 469 CMVDILGRCGKLKEAEELIERMVVKPNEMVWLAL 502
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 2/163 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M ++VISWTT++ + EA+ +FK M+ C +
Sbjct: 185 MPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMG 244
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
Q VH I G + + +L+ Y C + +FD H+ W ++ G +
Sbjct: 245 IQ-VHGLIIKLG-FLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYS 302
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEG 163
+N ++A+ +FS ML + P+ TF L CS G + G
Sbjct: 303 LNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWG 345
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 110 bits (275), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 108/219 (49%), Gaps = 7/219 (3%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ R V++W +++ + + G+ EA+++F M E NE T
Sbjct: 465 IKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSY-LEMNEVTFLAVIQACSSIGSLEK 523
Query: 61 XQWVHSYIDTRG--DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICG 118
+WVH + G DL AL++MY KCGD++ T+F + + +SW ++I
Sbjct: 524 GKWVHHKLIISGLKDLFTD----TALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINA 579
Query: 119 LAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQ 178
M+G A+ F+ M+ G +P++V F+ +L C H G V EG +F M+ + P
Sbjct: 580 YGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPN 639
Query: 179 MRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
H+ C +D+ R+G +EA ++ M A+ +WG+L
Sbjct: 640 SEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSL 678
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 105/210 (50%), Gaps = 14/210 (6%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+S R++++W +L+ Y G +A+ +F+QMV R +P+ T
Sbjct: 365 VSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQR-IKPDAFTLASSISACENAGLVPL 423
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H ++ R D V + N+L++MY K G + T+F+ ++H+ ++W +++CG +
Sbjct: 424 GKQIHGHV-IRTD-VSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFS 481
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEG-----TMFFKAMRDSYL 175
NG+ EA+ LF M ++ ++VTF+ ++ CS G + +G + ++D +
Sbjct: 482 QNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFT 541
Query: 176 VPQMRHYGCMVDMYGRAGLFEEAEAFLRAM 205
++DMY + G AE RAM
Sbjct: 542 DT------ALIDMYAKCGDLNAAETVFRAM 565
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 7/208 (3%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M RD+++W+TLV + + G +A+ +FK MVD EP+ T
Sbjct: 162 MPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVD-DGVEPDAVTMISVVEGCAELGCLRI 220
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ VH I TR + + N+LL MY KCGD+ IF+ + K+ +SW +I
Sbjct: 221 ARSVHGQI-TRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYN 279
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMF--FKAMRDSYLVPQ 178
++A++ FS M+ G++P+ VT +L C GL+ EG F R+ L P
Sbjct: 280 RGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRE--LDPN 337
Query: 179 MRHYG-CMVDMYGRAGLFEEAEAFLRAM 205
+V++Y G + E LR +
Sbjct: 338 YESLSLALVELYAECGKLSDCETVLRVV 365
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 91/200 (45%), Gaps = 2/200 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+++++ +SWT ++ +Y RG E+A+ F +M+ EPN T
Sbjct: 263 IAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKS-GIEPNLVTLYSVLSSCGLIGLIRE 321
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ VH + R ++ AL+ +Y +CG + T+ ++ ++ ++W ++I A
Sbjct: 322 GKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYA 381
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
G +A+ LF M+ Q ++PD T + C + GLV G + + + +
Sbjct: 382 HRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFV 441
Query: 181 HYGCMVDMYGRAGLFEEAEA 200
++DMY ++G + A
Sbjct: 442 Q-NSLIDMYSKSGSVDSAST 460
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%)
Query: 80 IGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQG 139
I +LL MY + G++ +FD + +D ++W T++ NG +A+++F M+ G
Sbjct: 138 IETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDG 197
Query: 140 VQPDDVTFIGLLCRCSHKG 158
V+PD VT I ++ C+ G
Sbjct: 198 VEPDAVTMISVVEGCAELG 216
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 111/251 (44%), Gaps = 36/251 (14%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVF------------------------------- 29
+ QR+ + W ++ Y G +EAV ++
Sbjct: 109 IPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIE 168
Query: 30 --KQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWVHSYIDTRGDLVVGGNIGNALLNM 87
++M++ R +PN T + +HSY R + + + L+
Sbjct: 169 FYRKMIEFR-FKPNLITLLALVSACSAIGAFRLIKEIHSYA-FRNLIEPHPQLKSGLVEA 226
Query: 88 YVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTF 147
Y +CG + +FD +E +D ++W ++I A++G + A++ F M + V PDD+ F
Sbjct: 227 YGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAF 286
Query: 148 IGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQMRHYGCMVDMYGRAGLFEEAEAFLRAML 206
+ +L CSH GL E ++FK M+ Y L HY C+VD+ R G FEEA ++AM
Sbjct: 287 LNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMP 346
Query: 207 VEAEGPIWGAL 217
+ WGAL
Sbjct: 347 EKPTAKTWGAL 357
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 109/219 (49%), Gaps = 5/219 (2%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M ++ ++W ++ Y G+ EEA+ + M D ++ T
Sbjct: 285 MPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDS-GVSIDQFTLSIMIRISTKLAKLEL 343
Query: 61 XQWVHSYIDTRG-DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGL 119
+ H+ + G + + N AL++ Y K G + +FD L K+ ISW ++ G
Sbjct: 344 TKQAHASLIRNGFESEIVAN--TALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGY 401
Query: 120 AMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQ 178
A +G G +AV+LF M+ V P+ VTF+ +L C++ GL +G F +M + + + P+
Sbjct: 402 ANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPR 461
Query: 179 MRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HY CM+++ GR GL +EA AF+R ++ +W AL
Sbjct: 462 AMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAAL 500
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 72/161 (44%), Gaps = 11/161 (6%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFK----QMVDCREAEPNEATXXXXXXXXXXXX 56
+ +R++ S+ +++ +V G+ EA +FK ++ DC T
Sbjct: 184 IPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDC-----ETHTFAVMLRASAGLG 238
Query: 57 XXXXXQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVI 116
+ +H G +V + L++MY KCGD+ F+ + K ++W VI
Sbjct: 239 SIYVGKQLHVCALKLG-VVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVI 297
Query: 117 CGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHK 157
G A++G+ +EA+ L M GV D T + ++ R S K
Sbjct: 298 AGYALHGYSEEALCLLYDMRDSGVSIDQFT-LSIMIRISTK 337
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 103/218 (47%), Gaps = 2/218 (0%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+++ D+ W +++ + +A+ +F++M PNE +
Sbjct: 478 INELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLH 537
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ H + G V + AL +MY KCG++ FD + K+ + W +I G
Sbjct: 538 GRQFHGLVVKSG-YVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYG 596
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQM 179
NG G EAV L+ M+ G +PD +TF+ +L CSH GLV G +M+ + + P++
Sbjct: 597 HNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPEL 656
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HY C+VD GRAG E+AE A ++ +W L
Sbjct: 657 DHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEIL 694
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 75/152 (49%), Gaps = 3/152 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +RDV+SW ++ VR G E+A+ V+K+MV C P+ T
Sbjct: 98 MPERDVVSWNNMISVLVRKGFEEKALVVYKRMV-CDGFLPSRFTLASVLSACSKVLDGVF 156
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDM-HMGLTIFDMLEHKDFISWGTVICGL 119
H + + L +GNALL+MY KCG + G+ +F+ L + +S+ VI GL
Sbjct: 157 GMRCHG-VAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGL 215
Query: 120 AMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLL 151
A EAVQ+F LM +GVQ D V +L
Sbjct: 216 ARENKVLEAVQMFRLMCEKGVQVDSVCLSNIL 247
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 90/219 (41%), Gaps = 5/219 (2%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ Q V +W ++ Y H EEA++ F+QM + +P++ T
Sbjct: 376 IPQPSVSAWNAMLSGYSNYEHYEEAISNFRQM-QFQNLKPDKTTLSVILSSCARLRFLEG 434
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIF-DMLEHKDFISWGTVICGL 119
+ +H + R ++ +I + L+ +Y +C M + IF D + D W ++I G
Sbjct: 435 GKQIHGVV-IRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGF 493
Query: 120 AMNGHGKEAVQLFSLMLVQGVQ-PDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQ 178
N +A+ LF M V P++ +F +L CS + G F + S V
Sbjct: 494 RHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSD 553
Query: 179 MRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+ DMY + G + A F A+L IW +
Sbjct: 554 SFVETALTDMYCKCGEIDSARQFFDAVL-RKNTVIWNEM 591
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 8/141 (5%)
Query: 72 GDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQL 131
GDL ++ N+LL +Y K DM+ IF + + +SW +I G ++V+
Sbjct: 282 GDL----HLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEF 337
Query: 132 FSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGR 191
+ M G QP++VT I +L C G V G F ++ P + + M+ Y
Sbjct: 338 LTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQ----PSVSAWNAMLSGYSN 393
Query: 192 AGLFEEAEAFLRAMLVEAEGP 212
+EEA + R M + P
Sbjct: 394 YEHYEEAISNFRQMQFQNLKP 414
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 103/216 (47%), Gaps = 2/216 (0%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
+ + +W +++ Y + EEA + ++M+ +PN T +
Sbjct: 343 ENSLCTWNSIISGYAQLNKSEEASHLLREML-VAGFQPNSITLASILPLCARIANLQHGK 401
Query: 63 WVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMN 122
H YI R + N+L+++Y K G + + D++ +D +++ ++I G
Sbjct: 402 EFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQ 461
Query: 123 GHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQMRH 181
G G A+ LF M G++PD VT + +L CSH LV EG F M+ Y + P ++H
Sbjct: 462 GEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQH 521
Query: 182 YGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+ CMVD+YGRAG +A+ + M + G W L
Sbjct: 522 FSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATL 557
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 11/121 (9%)
Query: 79 NIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQ 138
N+ N L+ MY KC D+ L +F E +W ++I G A +EA L MLV
Sbjct: 316 NVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVA 375
Query: 139 GVQPDDVTFIGLLCRCSHKGLVSEGTMFF------KAMRDSYLVPQMRHYGCMVDMYGRA 192
G QP+ +T +L C+ + G F K +D ++ + +VD+Y ++
Sbjct: 376 GFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTML-----WNSLVDVYAKS 430
Query: 193 G 193
G
Sbjct: 431 G 431
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 2/141 (1%)
Query: 7 ISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWVHS 66
+ W L+ +Y + EE +A +K+MV + P+ T + VH
Sbjct: 110 LPWNVLIASYAKNELFEEVIAAYKRMVS-KGIRPDAFTYPSVLKACGETLDVAFGRVVHG 168
Query: 67 YIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGK 126
I+ + NAL++MY + +M + +FD + +D +SW VI A G
Sbjct: 169 SIEV-SSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWS 227
Query: 127 EAVQLFSLMLVQGVQPDDVTF 147
EA +LF M GV+ +T+
Sbjct: 228 EAFELFDKMWFSGVEVSVITW 248
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 110/219 (50%), Gaps = 3/219 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+S+++++ WT + + Y+ + + + + + P+
Sbjct: 352 LSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEP 411
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H + R +++ + A ++MY KCG++ IFD +D + + +I G A
Sbjct: 412 GKEIHGH-SLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCA 470
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQM 179
+GH ++ Q F M G +PD++TF+ LL C H+GLV EG +FK+M ++Y + P+
Sbjct: 471 HHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPET 530
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAM-LVEAEGPIWGAL 217
HY CM+D+YG+A ++A + + VE + I GA
Sbjct: 531 GHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAF 569
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 10/205 (4%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M ++D ++WT ++ Y + G EA +F +M + P+ T
Sbjct: 294 MIKKDRVAWTAMITVYSQNGKSSEAFKLFFEM-EKTGVSPDAGTLSTVLSACGSVGALEL 352
Query: 61 XQWVHSYIDTRGDLVVGGNI--GNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICG 118
+ + ++ +L + NI L++MY KCG + L +F+ + K+ +W +I
Sbjct: 353 GKQIETHA---SELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITA 409
Query: 119 LAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVP 177
A GH KEA+ LF M V P D+TFIG+L C H GLV +G +F M + LVP
Sbjct: 410 YAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVP 466
Query: 178 QMRHYGCMVDMYGRAGLFEEAEAFL 202
++ HY ++D+ RAG+ +EA F+
Sbjct: 467 KIEHYTNIIDLLSRAGMLDEAWEFM 491
Score = 90.5 bits (223), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 3/217 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+++RD +SW +++ Y G+ ++A+ +F++M + EP+E T
Sbjct: 193 ITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEE-EGFEPDERTLVSMLGACSHLGDLRT 251
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ + T+ + + +G+ L++MY KCGD+ +F+ + KD ++W +I +
Sbjct: 252 GRLLEEMAITK-KIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYS 310
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
NG EA +LF M GV PD T +L C G + G + L +
Sbjct: 311 QNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIY 370
Query: 181 HYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+VDMYG+ G EEA AM V+ E W A+
Sbjct: 371 VATGLVDMYGKCGRVEEALRVFEAMPVKNEA-TWNAM 406
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 73/140 (52%), Gaps = 3/140 (2%)
Query: 79 NIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQ 138
+I ++L+ MY KCG + +FD + +D +SW ++I G + G+ K+A+ LF M +
Sbjct: 168 HINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEE 227
Query: 139 GVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGC-MVDMYGRAGLFEE 197
G +PD+ T + +L CSH G + G + + M + + G ++ MYG+ G +
Sbjct: 228 GFEPDERTLVSMLGACSHLGDLRTGRL-LEEMAITKKIGLSTFLGSKLISMYGKCGDLDS 286
Query: 198 AEAFLRAMLVEAEGPIWGAL 217
A M ++ + W A+
Sbjct: 287 ARRVFNQM-IKKDRVAWTAM 305
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 108 bits (270), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 103/219 (47%), Gaps = 3/219 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ ++DV+SW L+ + G ++ F M+ P+
Sbjct: 325 IPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQ 384
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ HSY+ G IG +L+ +Y +CG + +F+ + KD + W ++I G
Sbjct: 385 AKCFHSYVIKYG-FDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYG 443
Query: 121 MNGHGKEAVQLFSLMLVQG-VQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQ 178
++G G +A++ F+ M+ V+P++VTF+ +L CSH GL+ EG FK M + Y L P
Sbjct: 444 IHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPN 503
Query: 179 MRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+ HY +VD+ GR G + A + M I G L
Sbjct: 504 LEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTL 542
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 22/227 (9%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
++++DVISW+T++ YV+ G EA+ VF M+D EPN AT
Sbjct: 224 IAEKDVISWSTVIACYVQNGAAAEALLVFNDMMD-DGTEPNVATVLCVLQACAAAHDLEQ 282
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ H + R L + AL++MY+KC +F + KD +SW +I G
Sbjct: 283 GRKTHE-LAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFT 341
Query: 121 MNGHGKEAVQLFSLMLVQ-GVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQM 179
+NG +++ FS+ML++ +PD + + +L CS G + + F SY++
Sbjct: 342 LNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCF-----HSYVI--- 393
Query: 180 RHYG---------CMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
YG +V++Y R G A + ++ + +W +L
Sbjct: 394 -KYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALK-DTVVWTSL 438
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 7/203 (3%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ + D+++W+++V + + G +AV F++MV + P+ T
Sbjct: 122 LEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRL 181
Query: 61 XQWVHSYIDTRG---DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVIC 117
+ VH ++ RG DL ++ N+LLN Y K + +F M+ KD ISW TVI
Sbjct: 182 GRCVHGFVIRRGFSNDL----SLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIA 237
Query: 118 GLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVP 177
NG EA+ +F+ M+ G +P+ T + +L C+ + +G + L
Sbjct: 238 CYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLET 297
Query: 178 QMRHYGCMVDMYGRAGLFEEAEA 200
+++ +VDMY + EEA A
Sbjct: 298 EVKVSTALVDMYMKCFSPEEAYA 320
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 98/220 (44%), Gaps = 7/220 (3%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M++R + W TL+ + R EE + F M E +P+ T
Sbjct: 20 MTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFR-DEEKPDNFTLPVALKACGELREVNY 78
Query: 61 XQWVHSYIDTRGDLVVGGN--IGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICG 118
+ +H ++ + D+ +G + +G++L+ MY+KCG M L +FD LE D ++W +++ G
Sbjct: 79 GEMIHGFV--KKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSG 136
Query: 119 LAMNGHGKEAVQLFSLM-LVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVP 177
NG +AV+ F M + V PD VT I L+ C+ G +
Sbjct: 137 FEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSN 196
Query: 178 QMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+ +++ Y ++ F+EA + M+ E + W +
Sbjct: 197 DLSLVNSLLNCYAKSRAFKEAVNLFK-MIAEKDVISWSTV 235
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 107 bits (268), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 9/219 (4%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M RDV SW L+ V G EA+ ++K+M + +E T
Sbjct: 170 MPVRDVASWNALIAGLVSGNRASEAMELYKRM-ETEGIRRSEVTVVAALGACSHLGDVKE 228
Query: 61 XQWV-HSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLE-HKDFISWGTVICG 118
+ + H Y D V+ + NA ++MY KCG + +F+ K ++W T+I G
Sbjct: 229 GENIFHGY---SNDNVI---VSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITG 282
Query: 119 LAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQ 178
A++G A+++F + G++PDDV+++ L C H GLV G F M +
Sbjct: 283 FAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERN 342
Query: 179 MRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
M+HYGC+VD+ RAG EA + +M + + +W +L
Sbjct: 343 MKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSL 381
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 5/135 (3%)
Query: 64 VHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNG 123
+H I+ RG L + LL+ Y K GD+ +FD + +D SW +I GL
Sbjct: 131 LHCQINRRG-LSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGN 189
Query: 124 HGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYG 183
EA++L+ M +G++ +VT + L CSH G V EG F + ++
Sbjct: 190 RASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVS----N 245
Query: 184 CMVDMYGRAGLFEEA 198
+DMY + G ++A
Sbjct: 246 AAIDMYSKCGFVDKA 260
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 107 bits (267), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 110/219 (50%), Gaps = 5/219 (2%)
Query: 3 QRDVISWTTLVMAYVRGGHC-EEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXX 61
+RD++S T L+ + + +C +A +FK M+ + + +E
Sbjct: 277 KRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMK-TKMDEVVVSSMLKICTTIASVTIG 335
Query: 62 QWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAM 121
+ +H + + +GN+L++MY K G++ + F+ ++ KD SW ++I G
Sbjct: 336 RQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGR 395
Query: 122 NGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQMR 180
+G+ ++A+ L++ M + ++P+DVTF+ LL CSH G G + M + + + +
Sbjct: 396 HGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREE 455
Query: 181 HYGCMVDMYGRAGLFEEAEAFLRAM--LVEAEGPIWGAL 217
H C++DM R+G EEA A +R+ +V WGA
Sbjct: 456 HLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAF 494
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 76/151 (50%), Gaps = 2/151 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+S+RDV+SWT ++ + R G+ +A+ +FK+M + + N+ T
Sbjct: 73 ISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHR-EDVKANQFTYGSVLKSCKDLGCLKE 131
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+H ++ +G+ + +ALL++Y +CG M FD ++ +D +SW +I G
Sbjct: 132 GMQIHGSVE-KGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYT 190
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLL 151
N + LF LML +G +PD TF LL
Sbjct: 191 ANACADTSFSLFQLMLTEGKKPDCFTFGSLL 221
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 1/138 (0%)
Query: 80 IGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQG 139
+ + L+++Y+K GD+ +FD + +D +SW +I + G+ +A+ LF M +
Sbjct: 49 LKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHRED 108
Query: 140 VQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAE 199
V+ + T+ +L C G + EG ++ + ++ +Y R G EEA
Sbjct: 109 VKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEAR 168
Query: 200 AFLRAMLVEAEGPIWGAL 217
+M E + W A+
Sbjct: 169 LQFDSM-KERDLVSWNAM 185
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 14/206 (6%)
Query: 4 RDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEAT--XXXXXXXXXXXXXXXXX 61
R++ISW ++ + + G EA+ +F + E PNE T
Sbjct: 436 REIISWNAMISGFAQNGFSHEALKMF--LSAAAETMPNEYTFGSVLNAIAFAEDISVKQG 493
Query: 62 QWVHSYIDTRGDLVVGGN----IGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVIC 117
Q H+++ L +G N + +ALL+MY K G++ +F+ + K+ W ++I
Sbjct: 494 QRCHAHL-----LKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIIS 548
Query: 118 GLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LV 176
+ +G + + LF M+ + V PD VTF+ +L C+ KG+V +G F M + Y L
Sbjct: 549 AYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLE 608
Query: 177 PQMRHYGCMVDMYGRAGLFEEAEAFL 202
P HY CMVDM GRAG +EAE +
Sbjct: 609 PSHEHYSCMVDMLGRAGRLKEAEELM 634
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 72 GDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNG-HGKEAVQ 130
DLVVG N+ + MY + G +FD + KD ISW +++ GL+ G G EAV
Sbjct: 207 SDLVVG----NSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVV 262
Query: 131 LFSLMLVQGVQPDDVTFIGLLCRCSHK 157
+F M+ +GV+ D V+F ++ C H+
Sbjct: 263 IFRDMMREGVELDHVSFTSVITTCCHE 289
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 79/167 (47%), Gaps = 14/167 (8%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCE-EAVAVFKQMVDCREA-EPNEATXXXXXXXXXXXXXX 58
MS +D+ISW +L+ + G EAV +F+ M+ RE E + +
Sbjct: 235 MSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMM--REGVELDHVSFTSVITTCCHETDL 292
Query: 59 XXXQWVHSYIDTRG--DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVI 116
+ +H RG L+ +GN L++ Y KCG + ++F + ++ +SW T+I
Sbjct: 293 KLARQIHGLCIKRGYESLL---EVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI 349
Query: 117 CGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEG 163
+ + +AV +F M GV P++VTF+GL+ + EG
Sbjct: 350 -----SSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEG 391
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 89/211 (42%), Gaps = 18/211 (8%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
MS+R+V+SWTT++ + ++AV++F M PNE T
Sbjct: 337 MSERNVVSWTTMI-----SSNKDDAVSIFLNM-RFDGVYPNEVTFVGLINAVKCNEQIKE 390
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+H G V ++GN+ + +Y K + F+ + ++ ISW +I G A
Sbjct: 391 GLKIHGLCIKTG-FVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFA 449
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
NG EA+++F L P++ TF +L + +E + R + ++
Sbjct: 450 QNGFSHEALKMF-LSAAAETMPNEYTFGSVLNAIA----FAEDISVKQGQRCHAHLLKLG 504
Query: 181 HYGC------MVDMYGRAGLFEEAEAFLRAM 205
C ++DMY + G +E+E M
Sbjct: 505 LNSCPVVSSALLDMYAKRGNIDESEKVFNEM 535
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 93/185 (50%), Gaps = 5/185 (2%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +R+V+SW +L+ Y G A+ F+ M+D +++P+E T
Sbjct: 357 MPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLEL 416
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ YI + + + + +L+ MY + G++ +FD ++ +D +S+ T+ A
Sbjct: 417 GDCIVDYI-RKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFA 475
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
NG G E + L S M +G++PD VT+ +L C+ GL+ EG FK++R+ P
Sbjct: 476 ANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRN----PLAD 531
Query: 181 HYGCM 185
HY CM
Sbjct: 532 HYACM 536
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 94/238 (39%), Gaps = 35/238 (14%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M ++ V+SW ++ Y + G E+A+ +F M+ PNE T
Sbjct: 224 MPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRL-GVRPNETTWVIVISACSFRADPSL 282
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKC----------------------------- 91
+ + ID + + + + ALL+M+ KC
Sbjct: 283 TRSLVKLIDEKR-VRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGY 341
Query: 92 ---GDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQG-VQPDDVTF 147
GDM +FD + ++ +SW ++I G A NG A++ F M+ G +PD+VT
Sbjct: 342 TRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTM 401
Query: 148 IGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAEAFLRAM 205
I +L C H + G +R + + Y ++ MY R G EA+ M
Sbjct: 402 ISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEM 459
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 59/130 (45%)
Query: 88 YVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTF 147
+ K D+ FD + K +SW ++ G A NG ++A++LF+ ML GV+P++ T+
Sbjct: 208 FAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTW 267
Query: 148 IGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAEAFLRAMLV 207
+ ++ CS + S K + + + ++DM+ + + A +
Sbjct: 268 VIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGT 327
Query: 208 EAEGPIWGAL 217
+ W A+
Sbjct: 328 QRNLVTWNAM 337
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 101/207 (48%), Gaps = 4/207 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ +D+ISW +++ + + G E+AV F + E + ++
Sbjct: 368 LKSKDLISWNSIITGFAQKGLSEDAVKFFSYL-RSSEIKVDDYAFSALLRSCSDLATLQL 426
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHK-DFISWGTVICGL 119
Q +H+ + T+ V + ++L+ MY KCG + F + K ++W +I G
Sbjct: 427 GQQIHA-LATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGY 485
Query: 120 AMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV-PQ 178
A +G G+ ++ LFS M Q V+ D VTF +L CSH GL+ EG M Y + P+
Sbjct: 486 AQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPR 545
Query: 179 MRHYGCMVDMYGRAGLFEEAEAFLRAM 205
M HY VD+ GRAGL +A+ + +M
Sbjct: 546 MEHYAAAVDLLGRAGLVNKAKELIESM 572
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 93/216 (43%), Gaps = 4/216 (1%)
Query: 4 RDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQW 63
+D+ISW +++ + + E A +F QM E + T +
Sbjct: 268 KDLISWNSMIAGFSKHELKESAFELFIQM-QRHWVETDIYTYTGLLSACSGEEHQIFGKS 326
Query: 64 VHSYIDTRGDLVVGGNIGNALLNMYVK--CGDMHMGLTIFDMLEHKDFISWGTVICGLAM 121
+H + +G L + NAL++MY++ G M L++F+ L+ KD ISW ++I G A
Sbjct: 327 LHGMVIKKG-LEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQ 385
Query: 122 NGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRH 181
G ++AV+ FS + ++ DD F LL CS + G S V
Sbjct: 386 KGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFV 445
Query: 182 YGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
++ MY + G+ E A + + + W A+
Sbjct: 446 ISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAM 481
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 79 NIGNALLNMYVKCGDMHMGLTIFDML-EHKDFISWGTVICGLAMNGHGKEAVQLFSLMLV 137
I NA+++ Y CG + +FD L KD ISW ++I G + + + A +LF M
Sbjct: 239 TICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQR 298
Query: 138 QGVQPDDVTFIGLLCRCS 155
V+ D T+ GLL CS
Sbjct: 299 HWVETDIYTYTGLLSACS 316
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 104/218 (47%), Gaps = 2/218 (0%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M++RD++SW ++ Y + +A+ +F++M + + T
Sbjct: 407 MNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPV 466
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H + R + + AL++MY KCG + FD + KD +SWG +I G
Sbjct: 467 GKLIHCIV-IRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYG 525
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAM-RDSYLVPQM 179
+G G A++++S L G++P+ V F+ +L CSH G+V +G F +M RD + P
Sbjct: 526 FHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNH 585
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
H C+VD+ RA E+A F + + G +
Sbjct: 586 EHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGII 623
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 90/200 (45%), Gaps = 3/200 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ +DV+ WT ++ +R G E+A+ VF +M+ +EA
Sbjct: 306 IPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLG 365
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
VH Y+ R + N+L+ MY KCG + L IF+ + +D +SW +I G A
Sbjct: 366 AS-VHGYV-LRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYA 423
Query: 121 MNGHGKEAVQLFSLMLVQGVQP-DDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQM 179
N +A+ LF M + VQ D T + LL CS G + G + + S++ P
Sbjct: 424 QNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCS 483
Query: 180 RHYGCMVDMYGRAGLFEEAE 199
+VDMY + G E A+
Sbjct: 484 LVDTALVDMYSKCGYLEAAQ 503
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 11/150 (7%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +RDV+ WT ++ Y R G EA ++ +M + +P T
Sbjct: 107 MRERDVVHWTAMIGCYSRAGIVGEACSLVNEM-RFQGIKPGPVT---LLEMLSGVLEITQ 162
Query: 61 XQWVHSYIDTRG---DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVIC 117
Q +H + G D+ V N++LN+Y KC + +FD +E +D +SW T+I
Sbjct: 163 LQCLHDFAVIYGFDCDIAV----MNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMIS 218
Query: 118 GLAMNGHGKEAVQLFSLMLVQGVQPDDVTF 147
G A G+ E ++L M G++PD TF
Sbjct: 219 GYASVGNMSEILKLLYRMRGDGLRPDQQTF 248
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 92/220 (41%), Gaps = 9/220 (4%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M QRD++SW T++ Y G+ E + + +M P++ T
Sbjct: 205 MEQRDMVSWNTMISGYASVGNMSEILKLLYRMRG-DGLRPDQQTFGASLSVSGTMCDLEM 263
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H I G V ++ AL+ MY+KCG + + + +KD + W +I GL
Sbjct: 264 GRMLHCQIVKTG-FDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLM 322
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEG-TMFFKAMRDSYLV--P 177
G ++A+ +FS ML G ++ C+ G G ++ +R Y + P
Sbjct: 323 RLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTP 382
Query: 178 QMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+ ++ MY + G +++ M E + W A+
Sbjct: 383 AL---NSLITMYAKCGHLDKSLVIFERM-NERDLVSWNAI 418
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 107/220 (48%), Gaps = 5/220 (2%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M ++ +SW +LV AYV+ H +E +V E ++
Sbjct: 270 MGTKNAVSWCSLVAAYVQN-HEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLEL 328
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H++ + + +G+AL++MY KCG + FD + K+ ++ ++I G A
Sbjct: 329 GRSIHAHA-VKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYA 387
Query: 121 MNGHGKEAVQLFSLMLVQGV--QPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVP 177
G A+ LF M +G P+ +TF+ LL CS G V G F +MR +Y + P
Sbjct: 388 HQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEP 447
Query: 178 QMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HY C+VDM GRAG+ E A F++ M ++ +WGAL
Sbjct: 448 GAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGAL 487
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 64 VHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNG 123
VH+ I D + N L+NMY K + + ++ +SW ++I GLA NG
Sbjct: 28 VHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNG 87
Query: 124 HGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVS 161
H A+ F M +GV P+D TF C+ K + S
Sbjct: 88 HFSTALVEFFEMRREGVVPNDFTF-----PCAFKAVAS 120
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 64/153 (41%), Gaps = 4/153 (2%)
Query: 4 RDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREA-EPNEATXXXXXXXXXXXXXXXXXQ 62
R+V+SWT+L+ + GH A+ F +M RE PN+ T +
Sbjct: 71 RNVVSWTSLISGLAQNGHFSTALVEFFEMR--REGVVPNDFTFPCAFKAVASLRLPVTGK 128
Query: 63 WVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMN 122
+H+ + + ++ +G + +MY K +FD + ++ +W I +
Sbjct: 129 QIHA-LAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTD 187
Query: 123 GHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCS 155
G +EA++ F P+ +TF L CS
Sbjct: 188 GRPREAIEAFIEFRRIDGHPNSITFCAFLNACS 220
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 7/213 (3%)
Query: 8 SWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWVHSY 67
+W ++ ++ H EE + F++M+ C + PN T + +H++
Sbjct: 333 TWNAMISGLMQNNHHEEVINSFREMIRC-GSRPNTVTLSSLLPSLTYSSNLKGGKEIHAF 391
Query: 68 IDTRGDLVVGGNI--GNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHG 125
G NI ++++ Y K G + +FD + + I+W +I A++G
Sbjct: 392 AIRNG---ADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDS 448
Query: 126 KEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV-PQMRHYGC 184
A LF M G +PDDVT +L +H G F +M Y + P + HY C
Sbjct: 449 DSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYAC 508
Query: 185 MVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
MV + RAG +A F+ M ++ +WGAL
Sbjct: 509 MVSVLSRAGKLSDAMEFISKMPIDPIAKVWGAL 541
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 78/161 (48%), Gaps = 1/161 (0%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
MS+RDV+SW +++ Y + G E+ ++K M+ C + +PN T
Sbjct: 193 MSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIF 252
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
VH + + + ++ NA++ Y KCG + +FD + KD +++G +I G
Sbjct: 253 GLEVHKKM-IENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYM 311
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVS 161
+G KEA+ LFS M G+ + GL+ H+ +++
Sbjct: 312 AHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVIN 352
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 71/155 (45%), Gaps = 3/155 (1%)
Query: 64 VHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNG 123
VH ++ RG +GN ++ Y KC ++ +FD + +D +SW ++I G + +G
Sbjct: 154 VHGFV-IRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSG 212
Query: 124 HGKEAVQLFSLMLV-QGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHY 182
++ +++ ML +P+ VT I + C + G K M ++++ +
Sbjct: 213 SFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLC 272
Query: 183 GCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
++ Y + G + A A M E + +GA+
Sbjct: 273 NAVIGFYAKCGSLDYARALFDEM-SEKDSVTYGAI 306
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 3/218 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +RD I++T+LV + G E A++V M ++ +
Sbjct: 488 MKRRDNITYTSLVTRFNELGKHEMALSVINYMYG-DGIRMDQLSLPGFISASANLGALET 546
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H Y + ++ N+L++MY KCG + +F+ + D +SW ++ GLA
Sbjct: 547 GKHLHCY-SVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLA 605
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV-PQM 179
NG A+ F M ++ +PD VTF+ LL CS+ L G +F+ M+ Y + PQ+
Sbjct: 606 SNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQV 665
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HY +V + GRAG EEA + M ++ I+ L
Sbjct: 666 EHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTL 703
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 76/161 (47%), Gaps = 6/161 (3%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
MS R V +WT ++ A+ + A+++F++M+ PNE T
Sbjct: 84 MSHRTVFAWTVMISAFTKSQEFASALSLFEEMM-ASGTHPNEFTFSSVVRSCAGLRDISY 142
Query: 61 XQWVHSYIDTRGDLVVGGN--IGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICG 118
VH + G GN +G++L ++Y KCG +F L++ D ISW +I
Sbjct: 143 GGRVHGSVIKTG---FEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISS 199
Query: 119 LAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGL 159
L +EA+Q +S M+ GV P++ TF+ LL S GL
Sbjct: 200 LVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL 240
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 74/154 (48%), Gaps = 3/154 (1%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
++DV WT++V +VR +EAV F +M +PN T +
Sbjct: 287 EQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSL-GLQPNNFTYSAILSLCSAVRSLDFGK 345
Query: 63 WVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLT-IFDMLEHKDFISWGTVICGLAM 121
+HS G ++GNAL++MY+KC + + +F + + +SW T+I GL
Sbjct: 346 QIHSQTIKVG-FEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVD 404
Query: 122 NGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCS 155
+G ++ L M+ + V+P+ VT G+L CS
Sbjct: 405 HGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACS 438
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 87/202 (43%), Gaps = 8/202 (3%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +V+SWTTL++ V G ++ + +MV RE EPN T
Sbjct: 387 MVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVK-REVEPNVVTLSGVLRACSKLRHVRR 445
Query: 61 XQWVHSYIDTR---GDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVIC 117
+H+Y+ R G++VV GN+L++ Y + + ++ +D I++ +++
Sbjct: 446 VLEIHAYLLRRHVDGEMVV----GNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVT 501
Query: 118 GLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVP 177
G + A+ + + M G++ D ++ G + ++ G + G S
Sbjct: 502 RFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSG 561
Query: 178 QMRHYGCMVDMYGRAGLFEEAE 199
+VDMY + G E+A+
Sbjct: 562 AASVLNSLVDMYSKCGSLEDAK 583
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 3/155 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ D ISWT ++ + V EA+ + +MV PNE T
Sbjct: 185 LQNADTISWTMMISSLVGARKWREALQFYSEMVKA-GVPPNEFTFVKLLGASSFLGLEFG 243
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +HS I RG + + + +L++ Y + M + + + +D W +V+ G
Sbjct: 244 -KTIHSNIIVRG-IPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFV 301
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCS 155
N KEAV F M G+QP++ T+ +L CS
Sbjct: 302 RNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCS 336
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 52/117 (44%)
Query: 82 NALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQ 141
N LL++Y+K + +FD + H+ +W +I + A+ LF M+ G
Sbjct: 62 NNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTH 121
Query: 142 PDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEA 198
P++ TF ++ C+ +S G ++ + + D+Y + G F+EA
Sbjct: 122 PNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEA 178
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 100/219 (45%), Gaps = 7/219 (3%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+S ++ SW ++ A + E +F+ + + EPNE T
Sbjct: 642 ISDPNLCSWNCVISALSQNKAGREVFQLFRNL----KLEPNEITFVGLLSASTQLGSTSY 697
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
H ++ RG + AL++MY CG + G+ +F +W +VI
Sbjct: 698 GMQAHCHLIRRG-FQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHG 756
Query: 121 MNGHGKEAVQLFS-LMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV-PQ 178
+G G++A++LF L ++P+ +FI LL CSH G + EG ++K M + + V P
Sbjct: 757 FHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPV 816
Query: 179 MRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
H +VDM GRAG EA F+ + + +WGAL
Sbjct: 817 TEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGAL 855
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 4/207 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M RD++SW T++ + GH +++ FK M + E + T
Sbjct: 249 MEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQ-EADTVTFSCVISACSSIEELTL 307
Query: 61 XQWVHSYIDTRG-DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGL 119
+ +H + G ++GN++++MY KCGD T+F+ L +D IS ++ G
Sbjct: 308 GESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGF 367
Query: 120 AMNGHGKEAVQLFSLML-VQGVQPDDVTFIGLLCRCSHKGLVSEGTMFF-KAMRDSYLVP 177
A NG +EA + + M V +QPD T + + C EG +R
Sbjct: 368 AANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSR 427
Query: 178 QMRHYGCMVDMYGRAGLFEEAEAFLRA 204
+ ++DMYG+ GL +AE +
Sbjct: 428 ALEVINSVIDMYGKCGLTTQAELLFKT 454
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 4/208 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ ++DVI W +++ A + G AV +F +M+ + E + T
Sbjct: 148 LKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIH-KGNEFDSTTLLLAASALSSLHLSRK 206
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+H G LV ++ NAL+N+Y K ++ +F +EH+D +SW T++
Sbjct: 207 CSMLHCLAIETG-LVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCL 265
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
NGH ++++Q F M G + D VTF ++ CS ++ G + S P+
Sbjct: 266 ANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAH 325
Query: 181 HY--GCMVDMYGRAGLFEEAEAFLRAML 206
++ MY + G E AE ++
Sbjct: 326 VSVGNSIISMYSKCGDTEAAETVFEELV 353
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 82/224 (36%), Gaps = 52/224 (23%)
Query: 4 RDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQW 63
RD+ SW +++ GH E++ F+ M RE +
Sbjct: 543 RDLTSWNSVISGCASSGHHLESLRAFQAM--SREGKIR---------------------- 578
Query: 64 VHSYIDTRGDLVVGGNIG------------------------NALLNMYVKCGDMHMGLT 99
H I G + GN+G N L+ MY +C D+ +
Sbjct: 579 -HDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVK 637
Query: 100 IFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGL 159
+F ++ + SW VI L+ N G+E QLF + ++P+++TF+GLL + G
Sbjct: 638 VFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNL---KLEPNEITFVGLLSASTQLGS 694
Query: 160 VSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAEAFLR 203
S G + +VDMY G+ E R
Sbjct: 695 TSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFR 738
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 94/203 (46%), Gaps = 29/203 (14%)
Query: 2 SQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCRE-AEPNEATXXXXXXXXXXXXXXXX 60
+ RD++SW +++ A+ + G +A +FK++V ++ + +T
Sbjct: 456 THRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIF 515
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ VH ++ GDL +A L + M E +D SW +VI G A
Sbjct: 516 GKSVHCWLQKLGDLT------SAFLRLET-------------MSETRDLTSWNSVISGCA 556
Query: 121 MNGHGKEAVQLFSLMLVQG-VQPDDVTFIGLLCRCSHKGLVSEGTMF----FKAMRDSYL 175
+GH E+++ F M +G ++ D +T +G + + GLV +G F K++R+ L
Sbjct: 557 SSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRE--L 614
Query: 176 VPQMRHYGCMVDMYGRAGLFEEA 198
Q+++ ++ MYGR E A
Sbjct: 615 DTQLQN--TLITMYGRCKDIESA 635
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 10/134 (7%)
Query: 4 RDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQW 63
RDVIS ++ + G EEA + QM + +P+ AT +
Sbjct: 355 RDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRA 414
Query: 64 VHSY-----IDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICG 118
VH Y + +R V+ N++++MY KCG +F H+D +SW ++I
Sbjct: 415 VHGYTVRMEMQSRALEVI-----NSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISA 469
Query: 119 LAMNGHGKEAVQLF 132
+ NG +A LF
Sbjct: 470 FSQNGFTHKAKNLF 483
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 3/218 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ R++I+W ++ A GH EE + + +M ++ +
Sbjct: 508 LDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSF-GVSLDQFSFSEGLSAAAKLAVLEE 566
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
Q +H G I NA +MY KCG++ + + ++ SW +I L
Sbjct: 567 GQQLHGLAVKLG-FEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALG 625
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAM-RDSYLVPQM 179
+G+ +E F ML G++P VTF+ LL CSH GLV +G ++ + RD L P +
Sbjct: 626 RHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAI 685
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
H C++D+ GR+G EAE F+ M ++ +W +L
Sbjct: 686 EHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSL 723
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 83/206 (40%), Gaps = 4/206 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
MS+RD ISW ++ AY + GH EE+ +F M + E N T
Sbjct: 204 MSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD-EVNSTTVSTLLSVLGHVDHQKW 262
Query: 61 XQWVHSYIDTRG-DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGL 119
+ +H + G D VV + N LL MY G +F + KD ISW +++
Sbjct: 263 GRGIHGLVVKMGFDSVVC--VCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASF 320
Query: 120 AMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQM 179
+G +A+ L M+ G + VTF L C +G + + S L
Sbjct: 321 VNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQ 380
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAM 205
+V MYG+ G E+ L M
Sbjct: 381 IIGNALVSMYGKIGEMSESRRVLLQM 406
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 98/238 (41%), Gaps = 34/238 (14%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXX-XXXXXXXX 59
M +RDV++W L+ Y ++A+A F+ M N T
Sbjct: 406 MPRRDVVAWNALIGGYAEDEDPDKALAAFQTM-RVEGVSSNYITVVSVLSACLLPGDLLE 464
Query: 60 XXQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGL 119
+ +H+YI + G ++ N+L+ MY KCGD+ +F+ L++++ I+W ++
Sbjct: 465 RGKPLHAYIVSAG-FESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAAN 523
Query: 120 AMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEG---------------T 164
A +GHG+E ++L S M GV D +F L + ++ EG +
Sbjct: 524 AHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDS 583
Query: 165 MFFKAMRDSY------------LVPQMRH----YGCMVDMYGRAGLFEEAEAFLRAML 206
F A D Y L P + + ++ GR G FEE A ML
Sbjct: 584 FIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEML 641
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 10/160 (6%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQM----VDCREAEPNEATXXXXXXXXXXXX 56
M R+V+SWT+L++ Y G EE + ++K M V C E +
Sbjct: 103 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLG 162
Query: 57 XXXXXQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVI 116
Q V S ++++ + N+L++M G++ IFD + +D ISW ++
Sbjct: 163 RQIIGQVVKSGLESKL------AVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIA 216
Query: 117 CGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSH 156
A NGH +E+ ++FSLM + + T LL H
Sbjct: 217 AAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH 256
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 86/206 (41%), Gaps = 3/206 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +D+ISW +L+ ++V G +A+ + M+ ++ N T
Sbjct: 305 MPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS-VNYVTFTSALAACFTPDFFEK 363
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H + G L IGNAL++MY K G+M + + +D ++W +I G A
Sbjct: 364 GRILHGLVVVSG-LFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYA 422
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKG-LVSEGTMFFKAMRDSYLVPQM 179
+ +A+ F M V+GV + +T + +L C G L+ G + +
Sbjct: 423 EDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDE 482
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAM 205
++ MY + G ++ +
Sbjct: 483 HVKNSLITMYAKCGDLSSSQDLFNGL 508
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 3/218 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ R++I+W ++ A GH EE + + +M ++ +
Sbjct: 525 LDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSF-GVSLDQFSFSEGLSAAAKLAVLEE 583
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
Q +H G I NA +MY KCG++ + + ++ SW +I L
Sbjct: 584 GQQLHGLAVKLG-FEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALG 642
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAM-RDSYLVPQM 179
+G+ +E F ML G++P VTF+ LL CSH GLV +G ++ + RD L P +
Sbjct: 643 RHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAI 702
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
H C++D+ GR+G EAE F+ M ++ +W +L
Sbjct: 703 EHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSL 740
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 83/206 (40%), Gaps = 4/206 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
MS+RD ISW ++ AY + GH EE+ +F M + E N T
Sbjct: 221 MSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD-EVNSTTVSTLLSVLGHVDHQKW 279
Query: 61 XQWVHSYIDTRG-DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGL 119
+ +H + G D VV + N LL MY G +F + KD ISW +++
Sbjct: 280 GRGIHGLVVKMGFDSVVC--VCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASF 337
Query: 120 AMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQM 179
+G +A+ L M+ G + VTF L C +G + + S L
Sbjct: 338 VNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQ 397
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAM 205
+V MYG+ G E+ L M
Sbjct: 398 IIGNALVSMYGKIGEMSESRRVLLQM 423
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 98/238 (41%), Gaps = 34/238 (14%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXX-XXXXXXXX 59
M +RDV++W L+ Y ++A+A F+ M N T
Sbjct: 423 MPRRDVVAWNALIGGYAEDEDPDKALAAFQTM-RVEGVSSNYITVVSVLSACLLPGDLLE 481
Query: 60 XXQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGL 119
+ +H+YI + G ++ N+L+ MY KCGD+ +F+ L++++ I+W ++
Sbjct: 482 RGKPLHAYIVSAG-FESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAAN 540
Query: 120 AMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEG---------------T 164
A +GHG+E ++L S M GV D +F L + ++ EG +
Sbjct: 541 AHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDS 600
Query: 165 MFFKAMRDSY------------LVPQMRH----YGCMVDMYGRAGLFEEAEAFLRAML 206
F A D Y L P + + ++ GR G FEE A ML
Sbjct: 601 FIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEML 658
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 10/160 (6%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQM----VDCREAEPNEATXXXXXXXXXXXX 56
M R+V+SWT+L++ Y G EE + ++K M V C E +
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLG 179
Query: 57 XXXXXQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVI 116
Q V S ++++ + N+L++M G++ IFD + +D ISW ++
Sbjct: 180 RQIIGQVVKSGLESKL------AVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIA 233
Query: 117 CGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSH 156
A NGH +E+ ++FSLM + + T LL H
Sbjct: 234 AAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH 273
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 86/206 (41%), Gaps = 3/206 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +D+ISW +L+ ++V G +A+ + M+ ++ N T
Sbjct: 322 MPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS-VNYVTFTSALAACFTPDFFEK 380
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H + G L IGNAL++MY K G+M + + +D ++W +I G A
Sbjct: 381 GRILHGLVVVSG-LFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYA 439
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKG-LVSEGTMFFKAMRDSYLVPQM 179
+ +A+ F M V+GV + +T + +L C G L+ G + +
Sbjct: 440 EDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDE 499
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAM 205
++ MY + G ++ +
Sbjct: 500 HVKNSLITMYAKCGDLSSSQDLFNGL 525
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 74/130 (56%), Gaps = 3/130 (2%)
Query: 71 RGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQ 130
R V + N L++MY KCG + TIF + K +SW ++I A+NG G +A++
Sbjct: 309 RNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALE 368
Query: 131 LFSLMLVQ--GVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQMRHYGCMVD 187
+F M + GV P+ VTF+ ++ C+H GLV EG F M++ Y LVP HY C +D
Sbjct: 369 IFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFID 428
Query: 188 MYGRAGLFEE 197
+ +AG EE
Sbjct: 429 ILSKAGETEE 438
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 100/223 (44%), Gaps = 15/223 (6%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEA--TXXXXXXXXXXXXXX 58
+ QRD+ S + + +++R G+ + +A+F Q+ A P+ + T
Sbjct: 44 LPQRDLSSLNSQLSSHLRSGNPNDTLALFLQI---HRASPDLSSHTFTPVLGACSLLSYP 100
Query: 59 XXXQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICG 118
+ VH+ + +G G AL++MY K G + + +F+ +E KD +SW ++ G
Sbjct: 101 ETGRQVHALMIKQGA-ETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSG 159
Query: 119 LAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEG----TMFFKAMRDSY 174
NG GKEA+ +F+ M + V+ + T ++ C+ ++ +G M RD
Sbjct: 160 FLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDLV 219
Query: 175 LVPQMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
++ M+ Y GL EA ++ V + + +L
Sbjct: 220 VLGT-----AMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSL 257
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 82/153 (53%), Gaps = 3/153 (1%)
Query: 64 VHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNG 123
VHS + G + + +L+ MY K G + + + +F + KD I W TVI GLA N
Sbjct: 357 VHSLVIKLG-FDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNS 415
Query: 124 HGKEAVQLFS-LMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV-PQMRH 181
E++ +F+ L++ Q ++PD VT +G+L C + G V+EG F +M ++ V P H
Sbjct: 416 RAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEH 475
Query: 182 YGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIW 214
Y C++++ R G+ EA+ + E IW
Sbjct: 476 YACIIELLCRVGMINEAKDIADKIPFEPSSHIW 508
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 85/205 (41%), Gaps = 4/205 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +RDV+SW T++ V G E + VF M E P E T
Sbjct: 96 MPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRW-EIRPTEFTFSILASLVTCVRHG-- 152
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H G + N++++MY + G L++F +E +D +SW +I +
Sbjct: 153 -EQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCS 211
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
+G+ + A+ F LM +QPD+ T ++ CS +S+G +
Sbjct: 212 DSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSI 271
Query: 181 HYGCMVDMYGRAGLFEEAEAFLRAM 205
G +DM+ + +++ R +
Sbjct: 272 VLGAGIDMFSKCNRLDDSVKLFREL 296
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 2/151 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M RDV+SW L+++ G+ E A+ F M + E +P+E T
Sbjct: 195 MEDRDVVSWNCLILSCSDSGNKEVALDQFWLMRE-MEIQPDEYTVSMVVSICSDLRELSK 253
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ + G L +G A ++M+ KC + + +F LE D + ++I +
Sbjct: 254 GKQALALCIKMGFLSNSIVLG-AGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYS 312
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLL 151
+ G++A++LF L + Q V+PD TF +L
Sbjct: 313 WHCCGEDALRLFILAMTQSVRPDKFTFSSVL 343
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 2/198 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +RDV+ WT +++ + R G+ E AV F +M RE ++
Sbjct: 463 MKERDVVLWTEMIVGHSRLGNSELAVQFFIEMY--REKNRSDGFSLSSVIGACSDMAMLR 520
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
V + R ++ AL++MY K G TIF + + D W +++ +
Sbjct: 521 QGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYS 580
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
+G ++A+ F +L G PD VT++ LL CSH+G +G + M++ + +
Sbjct: 581 QHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQGIKAGFK 640
Query: 181 HYGCMVDMYGRAGLFEEA 198
HY CMV++ +AGL +EA
Sbjct: 641 HYSCMVNLVSKAGLVDEA 658
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 76/151 (50%), Gaps = 9/151 (5%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
++ RD ++W T+++ ++ E+ + F+ M+ +P + T
Sbjct: 260 VNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNML-MSGVDPTQFTYSIVLNGCSKLGSYSL 318
Query: 61 XQWVHSYI---DTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVIC 117
+ +H+ I D+ DL + NALL+MY CGDM +F + + + +SW ++I
Sbjct: 319 GKLIHARIIVSDSLADLP----LDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIIS 374
Query: 118 GLAMNGHGKEAVQLF-SLMLVQGVQPDDVTF 147
G + NG G++A+ ++ L+ + +PD+ TF
Sbjct: 375 GCSENGFGEQAMLMYRRLLRMSTPRPDEYTF 405
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 92/199 (46%), Gaps = 3/199 (1%)
Query: 5 DVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWV 64
+++SW +++ G E+A+ ++++++ P+E T + +
Sbjct: 365 NLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLL 424
Query: 65 HSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGH 124
H + T+ +G LL+MY K + +FD+++ +D + W +I G + G+
Sbjct: 425 HGQV-TKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGN 483
Query: 125 GKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFF-KAMRDSYLVPQMRHYG 183
+ AVQ F M + + D + ++ CS ++ +G +F A+R + M G
Sbjct: 484 SELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCV-MSVCG 542
Query: 184 CMVDMYGRAGLFEEAEAFL 202
+VDMYG+ G +E AE
Sbjct: 543 ALVDMYGKNGKYETAETIF 561
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 82/200 (41%), Gaps = 5/200 (2%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M R+V+S+ L AY R + +PN +T
Sbjct: 158 MPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLM 217
Query: 61 XQWVHSYIDTRG--DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICG 118
++S I G D VV + ++L MY CGD+ IFD + ++D ++W T+I G
Sbjct: 218 GSSLNSQIIKLGYSDNVV---VQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVG 274
Query: 119 LAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQ 178
N ++ + F ML+ GV P T+ +L CS G S G + + S +
Sbjct: 275 SLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLAD 334
Query: 179 MRHYGCMVDMYGRAGLFEEA 198
+ ++DMY G EA
Sbjct: 335 LPLDNALLDMYCSCGDMREA 354
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 2/211 (0%)
Query: 8 SWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWVHSY 67
+W +++ + EE + K+M+ PN T + H Y
Sbjct: 390 TWNSIISGFAYNERSEETSFLLKEML-LSGFHPNHITLASILPLFARVGNLQHGKEFHCY 448
Query: 68 IDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKE 127
I R + N+L++MY K G++ +FD + +D +++ ++I G G G+
Sbjct: 449 ILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEV 508
Query: 128 AVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVP-QMRHYGCMV 186
A+ F M G++PD VT + +L CSH LV EG F M + + ++ HY CMV
Sbjct: 509 ALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMV 568
Query: 187 DMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
D+Y RAG ++A + E + L
Sbjct: 569 DLYCRAGYLDKARDIFHTIPYEPSSAMCATL 599
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 11/133 (8%)
Query: 79 NIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQ 138
N+ N+L+ MY +C D+ +F +E +W ++I G A N +E L ML+
Sbjct: 358 NVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLS 417
Query: 139 GVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGC------MVDMYGRA 192
G P+ +T +L + G + G F Y++ + + C +VDMY ++
Sbjct: 418 GFHPNHITLASILPLFARVGNLQHGKEF-----HCYILRRQSYKDCLILWNSLVDMYAKS 472
Query: 193 GLFEEAEAFLRAM 205
G A+ +M
Sbjct: 473 GEIIAAKRVFDSM 485
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 8/144 (5%)
Query: 7 ISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWVHS 66
+ W L+ +Y+R +E+V+V+K+M+ + +E T + VH
Sbjct: 150 LPWNVLIGSYIRNKRFQESVSVYKRMMS-KGIRADEFTYPSVIKACAALLDFAYGRVVHG 208
Query: 67 YIDT---RGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNG 123
I+ R +L V NAL++MY + G + + +FD + +D +SW +I
Sbjct: 209 SIEVSSHRCNLYVC----NALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEE 264
Query: 124 HGKEAVQLFSLMLVQGVQPDDVTF 147
EA +L M + GV+ VT+
Sbjct: 265 KLGEAFKLLDRMYLSGVEASIVTW 288
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 2/211 (0%)
Query: 8 SWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWVHSY 67
+W +++ + EE + K+M+ PN T + H Y
Sbjct: 390 TWNSIISGFAYNERSEETSFLLKEML-LSGFHPNHITLASILPLFARVGNLQHGKEFHCY 448
Query: 68 IDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKE 127
I R + N+L++MY K G++ +FD + +D +++ ++I G G G+
Sbjct: 449 ILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEV 508
Query: 128 AVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVP-QMRHYGCMV 186
A+ F M G++PD VT + +L CSH LV EG F M + + ++ HY CMV
Sbjct: 509 ALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMV 568
Query: 187 DMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
D+Y RAG ++A + E + L
Sbjct: 569 DLYCRAGYLDKARDIFHTIPYEPSSAMCATL 599
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 11/133 (8%)
Query: 79 NIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQ 138
N+ N+L+ MY +C D+ +F +E +W ++I G A N +E L ML+
Sbjct: 358 NVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLS 417
Query: 139 GVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGC------MVDMYGRA 192
G P+ +T +L + G + G F Y++ + + C +VDMY ++
Sbjct: 418 GFHPNHITLASILPLFARVGNLQHGKEF-----HCYILRRQSYKDCLILWNSLVDMYAKS 472
Query: 193 GLFEEAEAFLRAM 205
G A+ +M
Sbjct: 473 GEIIAAKRVFDSM 485
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 8/144 (5%)
Query: 7 ISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWVHS 66
+ W L+ +Y+R +E+V+V+K+M+ + +E T + VH
Sbjct: 150 LPWNVLIGSYIRNKRFQESVSVYKRMMS-KGIRADEFTYPSVIKACAALLDFAYGRVVHG 208
Query: 67 YIDT---RGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNG 123
I+ R +L V NAL++MY + G + + +FD + +D +SW +I
Sbjct: 209 SIEVSSHRCNLYVC----NALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEE 264
Query: 124 HGKEAVQLFSLMLVQGVQPDDVTF 147
EA +L M + GV+ VT+
Sbjct: 265 KLGEAFKLLDRMYLSGVEASIVTW 288
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 75/139 (53%), Gaps = 1/139 (0%)
Query: 80 IGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQG 139
+ +L++ Y K G + +FD L+ + ++I G A NG G + V++ M
Sbjct: 456 VSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMN 515
Query: 140 VQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQMRHYGCMVDMYGRAGLFEEA 198
+ PD+VT + +L CSH GLV EG + F ++ Y + P + Y CMVD+ GRAGL E+A
Sbjct: 516 LIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKA 575
Query: 199 EAFLRAMLVEAEGPIWGAL 217
E L +A+ W +L
Sbjct: 576 ERLLLQARGDADCVAWSSL 594
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 1/145 (0%)
Query: 62 QWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAM 121
+ +HS + G + + N L++ Y CGD+ + F+ + KD ISW +++ A
Sbjct: 233 KQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCAD 292
Query: 122 NGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFF-KAMRDSYLVPQMR 180
G +++ LFS M G +P F+ L CS + G ++ + V +
Sbjct: 293 YGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLH 352
Query: 181 HYGCMVDMYGRAGLFEEAEAFLRAM 205
++DMYG+ E + +++
Sbjct: 353 VQSALIDMYGKCNGIENSALLYQSL 377
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 92/219 (42%), Gaps = 40/219 (18%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M ++DVISWT LV G +EA+ +F M P++
Sbjct: 390 MIEKDVISWTALVTGNTHNGSYDEALKLFCNM-RVGGITPDKIVTASVLSASAELTLLEF 448
Query: 61 XQWVH-SYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGL 119
Q VH +YI + ++ N+L+ MY KCG + IF+ +E +D I+W +I G
Sbjct: 449 GQQVHGNYI--KSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGY 506
Query: 120 AMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQ 178
A NG L+ + +F +MR Y + P
Sbjct: 507 AKNG-----------------------------------LLEDAQRYFDSMRTVYGITPG 531
Query: 179 MRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
HY CM+D++GR+G F + E L M VE + +W A+
Sbjct: 532 PEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAI 570
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 88/205 (42%), Gaps = 1/205 (0%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M DV+SW ++++ VR G EA+++F +M + R+ + ++ T
Sbjct: 288 MEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHE-RDMKIDDFTIPSILNCFALSRTEMK 346
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ + + NAL++MY K G M L +F+ + KD ISW ++ G
Sbjct: 347 IASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNT 406
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
NG EA++LF M V G+ PD + +L + L+ G S +
Sbjct: 407 HNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLS 466
Query: 181 HYGCMVDMYGRAGLFEEAEAFLRAM 205
+V MY + G E+A +M
Sbjct: 467 VNNSLVTMYTKCGSLEDANVIFNSM 491
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 14/221 (6%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREA-EPNEATXXXXXXXXXXXXXXXXX 61
+++ ++WT+++ Y + G +A+ F+ + RE + N+ T
Sbjct: 189 EKNNVTWTSMLTGYSQNGFAFKAIECFRDLR--REGNQSNQYTFPSVLTACASVSACRVG 246
Query: 62 QWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAM 121
VH I G + +AL++MY KC +M + + +E D +SW ++I G
Sbjct: 247 VQVHCCIVKSG-FKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVR 305
Query: 122 NGHGKEAVQLFSLMLVQGVQPDDVTFIGL-----LCRCSHKGLVSEGTMFFKAMRDSYLV 176
G EA+ +F M + ++ DD T + L R K S + K +Y +
Sbjct: 306 QGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKL 365
Query: 177 PQMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+VDMY + G+ + A M +E + W AL
Sbjct: 366 VN----NALVDMYAKRGIMDSALKVFEGM-IEKDVISWTAL 401
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 90.5 bits (223), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 11/209 (5%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
+ D +W +L+ + + G EA F++M+ P+ +
Sbjct: 330 KPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMV-PSLKCLTSLLSACSDIWTLKNGK 388
Query: 63 WVHSYI---DTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHK--DFISWGTVIC 117
+H ++ D+ V +L++MY+KCG IFD E K D + W +I
Sbjct: 389 EIHGHVIKAAAERDIFVL----TSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMIS 444
Query: 118 GLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LV 176
G +G + A+++F L+ + V+P TF +L CSH G V +G+ F+ M++ Y
Sbjct: 445 GYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYK 504
Query: 177 PQMRHYGCMVDMYGRAGLFEEAEAFLRAM 205
P H GCM+D+ GR+G EA+ + M
Sbjct: 505 PSTEHIGCMIDLLGRSGRLREAKEVIDQM 533
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 82/181 (45%), Gaps = 2/181 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ + V+++ + + G +VF M EPN+ T
Sbjct: 190 VPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQY 249
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIF-DMLEHKDFISWGTVICGL 119
+ +H + + + +G AL++MY KC +F ++ + ++ ISW +VI G+
Sbjct: 250 GRQLHGLV-MKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGM 308
Query: 120 AMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQM 179
+NG + AV+LF + +G++PD T+ L+ S G V E FF+ M +VP +
Sbjct: 309 MINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSL 368
Query: 180 R 180
+
Sbjct: 369 K 369
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 11/121 (9%)
Query: 80 IGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLML-VQ 138
+G +L++MY +CG+ + +F+ + HK +++ I GL NG +F+LM
Sbjct: 166 VGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFS 225
Query: 139 GVQPDDVTFIGLLCRCSH----------KGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDM 188
+P+DVTF+ + C+ GLV + F+ M + L+ C
Sbjct: 226 SEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSA 285
Query: 189 Y 189
Y
Sbjct: 286 Y 286
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 101/214 (47%), Gaps = 2/214 (0%)
Query: 5 DVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWV 64
++ISWTT++ V+ G EEA+ ++M + PN + + +
Sbjct: 510 NLISWTTMMNGMVQNGCSEEAILFLRKMQESG-LRPNAFSITVALSACAHLASLHIGRTI 568
Query: 65 HSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGH 124
H YI +I +L++MY KCGD++ +F + + +I A+ G+
Sbjct: 569 HGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGN 628
Query: 125 GKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGT-MFFKAMRDSYLVPQMRHYG 183
KEA+ L+ + G++PD++T +L C+H G +++ +F + + P + HYG
Sbjct: 629 LKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYG 688
Query: 184 CMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
MVD+ AG E+A + M + + + +L
Sbjct: 689 LMVDLLASAGETEKALRLIEEMPFKPDARMIQSL 722
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 8/208 (3%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M ++DV++W ++ YV+ G E+A+ + Q++ + + + T
Sbjct: 335 MFEKDVVTWNLIISGYVQQGLVEDAIYMC-QLMRLEKLKYDCVTLATLMSAAARTENLKL 393
Query: 61 XQWVHSYI---DTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVIC 117
+ V Y D+V+ + ++MY KCG + +FD KD I W T++
Sbjct: 394 GKEVQCYCIRHSFESDIVLASTV----MDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLA 449
Query: 118 GLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVP 177
A +G EA++LF M ++GV P+ +T+ ++ G V E F M+ S ++P
Sbjct: 450 AYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIP 509
Query: 178 QMRHYGCMVDMYGRAGLFEEAEAFLRAM 205
+ + M++ + G EEA FLR M
Sbjct: 510 NLISWTTMMNGMVQNGCSEEAILFLRKM 537
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 6/162 (3%)
Query: 4 RDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQW 63
R+V SW ++ R G CE A+ F +M++ E P+ +
Sbjct: 136 RNVFSWAAIIGVKCRIGLCEGALMGFVEMLE-NEIFPDNFVVPNVCKACGALKWSRFGRG 194
Query: 64 VHSYIDTRG--DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAM 121
VH Y+ G D V + ++L +MY KCG + +FD + ++ ++W ++ G
Sbjct: 195 VHGYVVKSGLEDCVF---VASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQ 251
Query: 122 NGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEG 163
NG +EA++LFS M QGV+P VT L ++ G V EG
Sbjct: 252 NGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEG 293
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 9/220 (4%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ R+ ++W L++ YV+ G EEA+ +F M + EP T
Sbjct: 234 IPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRK-QGVEPTRVTVSTCLSASANMGGVEE 292
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ H+ G + + +G +LLN Y K G + +FD + KD ++W +I G
Sbjct: 293 GKQSHAIAIVNG-MELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYV 351
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLL---CRCSHKGLVSEGTMFFKAMRDSYLVP 177
G ++A+ + LM ++ ++ D VT L+ R + L E + +R S+
Sbjct: 352 QQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCY--CIRHSF-ES 408
Query: 178 QMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+ ++DMY + G +A+ + VE + +W L
Sbjct: 409 DIVLASTVMDMYAKCGSIVDAKKVFDST-VEKDLILWNTL 447
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 87/200 (43%), Gaps = 3/200 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ QR+V +WT ++ YV + VF+ M+ + P+ T
Sbjct: 479 LEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKH-RPDSVTMGRVLTVCSDLKALKL 537
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H +I + + + ++ MY KCGD+ FD + K ++W +I
Sbjct: 538 GKELHGHI-LKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYG 596
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQM 179
N ++A+ F M+ +G P+ TF +L CS G V E FF M Y L P
Sbjct: 597 CNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSE 656
Query: 180 RHYGCMVDMYGRAGLFEEAE 199
HY ++++ R G EEA+
Sbjct: 657 EHYSLVIELLNRCGRVEEAQ 676
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 85/194 (43%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
+RD++ W ++ EA+ +F+ M+ + PN +
Sbjct: 277 ERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGK 336
Query: 63 WVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMN 122
VH+++ + V + + L+++Y KCGDM G +F + ++ ISW ++ G A N
Sbjct: 337 EVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAAN 396
Query: 123 GHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHY 182
G +A++ M +G +PD VT +L C+ + +G + +P +
Sbjct: 397 GRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLV 456
Query: 183 GCMVDMYGRAGLFE 196
++ MY + G+ E
Sbjct: 457 TSLMVMYSKCGVPE 470
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 6/155 (3%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVA--VFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
QR+ ISWT L+ Y G ++A+ V+ Q R P+ T
Sbjct: 380 QRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFR---PDVVTIATVLPVCAELRAIKQ 436
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H Y + + ++ +L+ MY KCG + +FD LE ++ +W +I
Sbjct: 437 GKEIHCYA-LKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYV 495
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCS 155
N + +++F LML+ +PD VT +L CS
Sbjct: 496 ENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCS 530
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 80 IGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLV-Q 138
+ +L++MY KCG + + +FD + +D + WG +I GLA N EA+ LF M+ +
Sbjct: 251 LKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEE 310
Query: 139 GVQPDDVTFIGLL 151
+ P+ V +L
Sbjct: 311 KIYPNSVILTTIL 323
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 2/154 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+ RDV+SWT ++ GH EA+ K+M+ EPN T
Sbjct: 446 LPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQ-EGVEPNPFTYSSALKACANSESLLI 504
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +HS I + + +G+AL++MY KCG + +FD + K+ +SW +I G A
Sbjct: 505 GRSIHS-IAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYA 563
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRC 154
NG +EA++L M +G + DD F +L C
Sbjct: 564 RNGFCREALKLMYRMEAEGFEVDDYIFATILSTC 597
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 90/198 (45%), Gaps = 2/198 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
MS R+ ++WT+++ A+ R G EEA+++F+ M R N T
Sbjct: 345 MSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKR-RHLIANNLTVVSILRACGSVGALLL 403
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ +H+ I + + IG+ L+ +Y KCG+ + L +D +SW +I G +
Sbjct: 404 GKELHAQI-IKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCS 462
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
GH EA+ M+ +GV+P+ T+ L C++ + G + ++ + +
Sbjct: 463 SLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVF 522
Query: 181 HYGCMVDMYGRAGLFEEA 198
++ MY + G EA
Sbjct: 523 VGSALIHMYAKCGFVSEA 540
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 82/158 (51%), Gaps = 2/158 (1%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M ++DVISWT ++ A R GH +A+ +F M++ PNE T
Sbjct: 244 MEEKDVISWTAVISACSRKGHGIKAIGMFIGMLN-HWFLPNEFTVCSILKACSEEKALRF 302
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+ VHS + R + +G +L++MY KCG++ +FD + +++ ++W ++I A
Sbjct: 303 GRQVHSLVVKRM-IKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHA 361
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKG 158
G G+EA+ LF +M + + +++T + +L C G
Sbjct: 362 REGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVG 399
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 90/203 (44%), Gaps = 22/203 (10%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M +++ ++WT ++ Y++ G +EA A+F+ V NE
Sbjct: 143 MPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFEL 202
Query: 61 XQWVHSYIDTRGDLVVGGNIGN-----ALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTV 115
+ VH G++V G +GN +L+ Y +CG++ L FDM+E KD ISW V
Sbjct: 203 GRQVH------GNMVKVG-VGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAV 255
Query: 116 ICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYL 175
I + GHG +A+ +F ML P++ T +L CS E + F S +
Sbjct: 256 ISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSE-----EKALRFGRQVHSLV 310
Query: 176 VPQMRHYGCMV-----DMYGRAG 193
V +M V DMY + G
Sbjct: 311 VKRMIKTDVFVGTSLMDMYAKCG 333
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 70/138 (50%), Gaps = 1/138 (0%)
Query: 81 GNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGV 140
+ LL MY CG + ++F+ + K+ +W +I A NG G++A+ +FS +G
Sbjct: 292 NHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGN 351
Query: 141 QPDDVTFIGLLCRCSHKGLVSEGTMFFKAM-RDSYLVPQMRHYGCMVDMYGRAGLFEEAE 199
PD F G+ C G V EG + F++M RD + P + Y +V+MY G +EA
Sbjct: 352 IPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEAL 411
Query: 200 AFLRAMLVEAEGPIWGAL 217
F+ M +E +W L
Sbjct: 412 EFVERMPMEPNVDVWETL 429
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 78/148 (52%), Gaps = 5/148 (3%)
Query: 71 RGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQ 130
RGD + N +++M+ +C + +FD + KD SW ++C + NG G +A+
Sbjct: 268 RGD----PKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALH 323
Query: 131 LFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQMRHYGCMVDMY 189
LF M G++P++ TF+ + C+ G + E + F +M++ + + P+ HY ++ +
Sbjct: 324 LFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVL 383
Query: 190 GRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
G+ G EAE ++R + E W A+
Sbjct: 384 GKCGHLVEAEQYIRDLPFEPTADFWEAM 411
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 71/137 (51%), Gaps = 3/137 (2%)
Query: 82 NALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQ 141
N+++ MY CG + LT+F+ + ++ +W VI A NG G++A+ FS +G +
Sbjct: 220 NSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNK 279
Query: 142 PDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQMRHYGCMVDMYGRAGLFEEAEA 200
PD F + C G ++EG + F++M Y ++P M HY +V M G +EA
Sbjct: 280 PDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALR 339
Query: 201 FLRAMLVEAEGPIWGAL 217
F+ +M E +W L
Sbjct: 340 FVESM--EPNVDLWETL 354
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 79.3 bits (194), Expect = 2e-15, Method: Composition-based stats.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 10/214 (4%)
Query: 10 TTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWVHSYID 69
T+++ Y R G ++AV++F + + ++ +E + +H Y
Sbjct: 489 TSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYAL 548
Query: 70 TRG---DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGK 126
G D+ ++GN+L++MY KC D + IF+ + D ISW ++I + +G
Sbjct: 549 KAGYFSDI----SLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGD 604
Query: 127 EAVQLFSLMLVQGVQPDDVTFIGLLC--RCSHKGLVSEGTMFFKAMRDSY-LVPQMRHYG 183
EA+ L+S M + ++PD +T ++ R + +S F +M+ Y + P HY
Sbjct: 605 EALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYT 664
Query: 184 CMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
V + G GL EEAE + +M V+ E + AL
Sbjct: 665 AFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRAL 698
Score = 56.2 bits (134), Expect = 1e-08, Method: Composition-based stats.
Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 12/215 (5%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
+S V+S+T L+ + R EA+ VF +M +PNE T
Sbjct: 140 LSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSL 199
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVK-----CGDMHMGLTIFDMLEHKDFISWGTV 115
+H I G + + N+L+++Y K C D+ L +FD + +D SW TV
Sbjct: 200 GIQIHGLIVKSG-FLNSVFVSNSLMSLYDKDSGSSCDDV---LKLFDEIPQRDVASWNTV 255
Query: 116 ICGLAMNGHGKEAVQLFSLM-LVQGVQPDDVTFIGLLCRCSHKGLVSEG-TMFFKAMRDS 173
+ L G +A LF M V+G D T LL C+ ++ G + +A+R
Sbjct: 256 VSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIG 315
Query: 174 YLVPQMRHYGCMVDMYGRAGLFEEAEAFLRAMLVE 208
L+ ++ ++ Y + ++ E+ M+ +
Sbjct: 316 -LMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQ 349
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 1/137 (0%)
Query: 82 NALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQ 141
+ ++ MY C L +F+ + ++ +WGT+I LA NG G+ A+ +F+ + +G +
Sbjct: 147 HTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNK 206
Query: 142 PDDVTFIGLLCRCSHKGLVSEGTMFFKAM-RDSYLVPQMRHYGCMVDMYGRAGLFEEAEA 200
PD F + C G ++EG + F++M RD +V M Y +++M G +EA
Sbjct: 207 PDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALD 266
Query: 201 FLRAMLVEAEGPIWGAL 217
F+ M VE +W L
Sbjct: 267 FVERMTVEPSVEMWETL 283
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 1/137 (0%)
Query: 82 NALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQ 141
NA++ MY C + L +F+ + + + ++ NG+G+EA+ LF+ +G +
Sbjct: 158 NAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNK 217
Query: 142 PDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSY-LVPQMRHYGCMVDMYGRAGLFEEAEA 200
P+ F + C+ G V EG++ F+AM Y +VP M HY + M +G +EA
Sbjct: 218 PNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALN 277
Query: 201 FLRAMLVEAEGPIWGAL 217
F+ M +E +W L
Sbjct: 278 FVERMPMEPSVDVWETL 294
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 96/220 (43%), Gaps = 5/220 (2%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M + SW T++ YV EA F +M +E +
Sbjct: 280 MPNPNSSSWNTILTGYVNSEKSGEATEFFTKM-HSSGVRFDEYSLSIVLAAVAALAVVPW 338
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
+H+ G L + +AL++MY KCG + +F + K+ I W +I G A
Sbjct: 339 GSLIHACAHKLG-LDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYA 397
Query: 121 MNGHGKEAVQLFS-LMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTM-FFKAMRDSYLV-P 177
NG EA++LF+ L + ++PD TF+ LL CSH + E + +F+ M + Y + P
Sbjct: 398 RNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKP 457
Query: 178 QMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
+ H ++ G+ G +A+ ++ +G W AL
Sbjct: 458 SVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRAL 497
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 9/153 (5%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M DVISW +LV YV+ G +E + +F ++ + PNE +
Sbjct: 116 MPDPDVISWNSLVSGYVQSGRFQEGICLFLEL-HRSDVFPNEFSFTAALAACARLHLSPL 174
Query: 61 XQWVHSYIDTRGDLVVGGNI--GNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICG 118
+HS + G + GN+ GN L++MY KCG M + +F +E KD +SW ++
Sbjct: 175 GACIHSKLVKLG--LEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVAS 232
Query: 119 LAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLL 151
+ NG + + F M PD VT+ L+
Sbjct: 233 CSRNGKLELGLWFFHQM----PNPDTVTYNELI 261
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 86/213 (40%), Gaps = 9/213 (4%)
Query: 8 SWTTLVMAYVRGGHCEEAVAVFKQMVDCRE--AEPNEATXXXXXXXXXXXXXXXXXQWVH 65
SW+T+V A R G ++ V + V+ +P+ + + +H
Sbjct: 23 SWSTIVPALARFG----SIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLH 78
Query: 66 SYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMNGHG 125
Y+ G V + N+L+ Y + +FD + D ISW +++ G +G
Sbjct: 79 GYVTKHG-FVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRF 137
Query: 126 KEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYG-C 184
+E + LF + V P++ +F L C+ L G + L G C
Sbjct: 138 QEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNC 197
Query: 185 MVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGAL 217
++DMYG+ G ++A + M E + W A+
Sbjct: 198 LIDMYGKCGFMDDAVLVFQHM-EEKDTVSWNAI 229
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 76/205 (37%), Gaps = 41/205 (20%)
Query: 1 MSQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXX 60
M ++D +SW +V + R G E + F QM PN T
Sbjct: 218 MEEKDTVSWNAIVASCSRNGKLELGLWFFHQM-------PNPDTVTY------------- 257
Query: 61 XQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLA 120
N L++ +VK GD + + + + + SW T++ G
Sbjct: 258 ---------------------NELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYV 296
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
+ EA + F+ M GV+ D+ + +L + +V G++ L ++
Sbjct: 297 NSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVV 356
Query: 181 HYGCMVDMYGRAGLFEEAEAFLRAM 205
++DMY + G+ + AE M
Sbjct: 357 VASALIDMYSKCGMLKHAELMFWTM 381
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 63/120 (52%), Gaps = 5/120 (4%)
Query: 83 ALLNMYVKCGDMHMGLTIFDMLEHK----DFISWGTVICGLAMNGHGKEAV-QLFSLMLV 137
AL+N Y + G L + D ++++ +++ TVI A G E + LF+ M
Sbjct: 181 ALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRH 240
Query: 138 QGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEE 197
+G+QPD VT+ LL C+ +GL E M F+ M D +VP + Y +V+ +G+ E+
Sbjct: 241 EGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEK 300
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 82/200 (41%), Gaps = 45/200 (22%)
Query: 5 DVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWV 64
D+ S+ L+ AY + G +EA+ VF QM PN
Sbjct: 316 DITSYNVLLEAYAKSGSIKEAMGVFHQM-QAAGCTPN----------------------- 351
Query: 65 HSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHK------DFISWGTVICG 118
N + LLN++ + G +F LE K D ++ +I
Sbjct: 352 -------------ANTYSVLLNLFGQSGRYDDVRQLF--LEMKSSNTDPDAATYNILIEV 396
Query: 119 LAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQ 178
G+ KE V LF M+ + ++PD T+ G++ C GL + + M + +VP
Sbjct: 397 FGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPS 456
Query: 179 MRHYGCMVDMYGRAGLFEEA 198
+ Y +++ +G+A L+EEA
Sbjct: 457 SKAYTGVIEAFGQAALYEEA 476
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 97/218 (44%), Gaps = 14/218 (6%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
+ D+++ ++L+ Y +AVA+ QMV+ +P+ T
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM-GYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 63 WVHSYIDTRG---DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLE----HKDFISWGTV 115
+ + RG DLV G + N L K GD+ + L++ +E D + + T+
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGL----CKRGDIDLALSLLKKMEKGKIEADVVIYNTI 264
Query: 116 ICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLL-CRCSHKGLVSEGTMFFKAMRDSY 174
I GL H +A+ LF+ M +G++PD T+ L+ C C++ G S+ + M +
Sbjct: 265 IDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY-GRWSDASRLLSDMIERK 323
Query: 175 LVPQMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGP 212
+ P + + ++D + + G EAE M+ + P
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 361
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 96/218 (44%), Gaps = 14/218 (6%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
+ D+++ ++L+ Y G EAVA+ QM E +PN T
Sbjct: 147 EPDIVTLSSLLNGYCHGKRISEAVALVDQMF-VMEYQPNTVTFNTLIHGLFLHNKASEAV 205
Query: 63 WVHSYIDTRG---DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLE----HKDFISWGTV 115
+ + RG DL G + N L K GD+ + L++ +E D + + T+
Sbjct: 206 ALIDRMVARGCQPDLFTYGTVVNGL----CKRGDIDLALSLLKKMEKGKIEADVVIYTTI 261
Query: 116 ICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLL-CRCSHKGLVSEGTMFFKAMRDSY 174
I L + +A+ LF+ M +G++P+ VT+ L+ C C++ G S+ + M +
Sbjct: 262 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY-GRWSDASRLLSDMIERK 320
Query: 175 LVPQMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGP 212
+ P + + ++D + + G EAE M+ + P
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 89/197 (45%), Gaps = 6/197 (3%)
Query: 5 DVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWV 64
+V++++ L+ A+V+ G EA ++ +M+ R +P+ T + +
Sbjct: 324 NVVTFSALIDAFVKEGKLVEAEKLYDEMIK-RSIDPDIFTYSSLINGFCMHDRLDEAKHM 382
Query: 65 HSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHK----DFISWGTVICGLA 120
+ ++ D N L+ + K + G+ +F + + + +++ T+I GL
Sbjct: 383 FELMISK-DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLF 441
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
G A ++F M+ GV PD +T+ LL G + + + F+ ++ S + P +
Sbjct: 442 QAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIY 501
Query: 181 HYGCMVDMYGRAGLFEE 197
Y M++ +AG E+
Sbjct: 502 TYNIMIEGMCKAGKVED 518
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 94/249 (37%), Gaps = 39/249 (15%)
Query: 2 SQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXX 61
S +VIS+T L+ +Y RGG C A A+F++M EP+ T
Sbjct: 177 STPNVISYTALMESYGRGGKCNNAEAIFRRM-QSSGPEPSAITYQIILKTFVEGDKFKEA 235
Query: 62 QWVHSYI--DTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIF------------------ 101
+ V + + + L + + ++ MY K G+ +F
Sbjct: 236 EEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSL 295
Query: 102 --------------DMLEHKDF----ISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQPD 143
D ++ D +S+ +I +EA+ +F ML GV+P
Sbjct: 296 MSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPT 355
Query: 144 DVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAEAFLR 203
+ LL + G+V + FK+MR + P + Y M+ Y A E AE F +
Sbjct: 356 HKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFK 415
Query: 204 AMLVEAEGP 212
+ V+ P
Sbjct: 416 RIKVDGFEP 424
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 94/249 (37%), Gaps = 39/249 (15%)
Query: 2 SQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXX 61
S +VIS+T L+ +Y RGG C A A+F++M EP+ T
Sbjct: 170 STPNVISYTALMESYGRGGKCNNAEAIFRRM-QSSGPEPSAITYQIILKTFVEGDKFKEA 228
Query: 62 QWVHSYI--DTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIF------------------ 101
+ V + + + L + + ++ MY K G+ +F
Sbjct: 229 EEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSL 288
Query: 102 --------------DMLEHKDF----ISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQPD 143
D ++ D +S+ +I +EA+ +F ML GV+P
Sbjct: 289 MSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPT 348
Query: 144 DVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAEAFLR 203
+ LL + G+V + FK+MR + P + Y M+ Y A E AE F +
Sbjct: 349 HKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFK 408
Query: 204 AMLVEAEGP 212
+ V+ P
Sbjct: 409 RIKVDGFEP 417
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 82/208 (39%), Gaps = 41/208 (19%)
Query: 2 SQRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXX 61
++ DV ++TTL+ + R G E A+++F++M + +PN T
Sbjct: 380 TKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNA-GCKPNICTF---------------- 422
Query: 62 QWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLE----HKDFISWGTVIC 117
NA + MY G + IFD + D ++W T++
Sbjct: 423 --------------------NAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLA 462
Query: 118 GLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVP 177
NG E +F M G P+ TF L+ S G + ++ M D+ + P
Sbjct: 463 VFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTP 522
Query: 178 QMRHYGCMVDMYGRAGLFEEAEAFLRAM 205
+ Y ++ R G++E++E L M
Sbjct: 523 DLSTYNTVLAALARGGMWEQSEKVLAEM 550
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 87/205 (42%), Gaps = 41/205 (20%)
Query: 6 VISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWVH 65
++++ +L+ AY R G +EA+ + QM + + +P+ V
Sbjct: 349 IVTYNSLISAYARDGMLDEAMELKNQMAE-KGTKPD----------------------VF 385
Query: 66 SYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEH----KDFISWGTVICGLAM 121
+Y LL+ + + G + ++IF+ + + + ++ I
Sbjct: 386 TYT--------------TLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGN 431
Query: 122 NGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRH 181
G E +++F + V G+ PD VT+ LL G+ SE + FK M+ + VP+
Sbjct: 432 RGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERET 491
Query: 182 YGCMVDMYGRAGLFEEAEAFLRAML 206
+ ++ Y R G FE+A R ML
Sbjct: 492 FNTLISAYSRCGSFEQAMTVYRRML 516
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Query: 82 NALLNMYVKCGDMHMGLTIFDMLEHKDF----ISWGTVICGLAMNGHGKEAVQLFSLMLV 137
NALL++Y K + + + + F +++ ++I A +G EA++L + M
Sbjct: 318 NALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAE 377
Query: 138 QGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEE 197
+G +PD T+ LL G V F+ MR++ P + + + MYG G F E
Sbjct: 378 KGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTE 437
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 94/215 (43%), Gaps = 14/215 (6%)
Query: 6 VISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWVH 65
+++ ++L+ Y G +AVA+ QMV+ P+ T +
Sbjct: 155 IVTLSSLLNGYCHGKRISDAVALVDQMVEM-GYRPDTITFTTLIHGLFLHNKASEAVALV 213
Query: 66 SYIDTRG---DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLE----HKDFISWGTVICG 118
+ RG +LV G + N L K GD + L + + +E D + + T+I
Sbjct: 214 DRMVQRGCQPNLVTYGVVVNGL----CKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDS 269
Query: 119 LAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLL-CRCSHKGLVSEGTMFFKAMRDSYLVP 177
L H +A+ LF M +G++P+ VT+ L+ C CS+ G S+ + M + + P
Sbjct: 270 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY-GRWSDASQLLSDMIEKKINP 328
Query: 178 QMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGP 212
+ + ++D + + G F EAE M+ + P
Sbjct: 329 NLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 363
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 97/218 (44%), Gaps = 14/218 (6%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
+ D+++ ++L+ Y +AVA+ QMV+ +P+ T
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVE-MGYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 63 WVHSYIDTRG---DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLE----HKDFISWGTV 115
+ + RG DLV G + N L K GD+ + L + + +E + + + T+
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGL----CKRGDIDLALNLLNKMEAARIKANVVIFNTI 264
Query: 116 ICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLL-CRCSHKGLVSEGTMFFKAMRDSY 174
I L H + AV LF+ M +G++P+ VT+ L+ C C++ G S+ + M +
Sbjct: 265 IDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNY-GRWSDASRLLSNMLEKK 323
Query: 175 LVPQMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGP 212
+ P + + ++D + + G EAE M+ + P
Sbjct: 324 INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP 361
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 8/140 (5%)
Query: 68 IDTRGDLVVGGNIG--NALLNMYVKCGDMHMGLTIFDMLEHK----DFISWGTVICGLAM 121
I TR + VG + NA++ +Y + G + D + + D IS+ T+I
Sbjct: 213 IFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLK 272
Query: 122 NG--HGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQM 179
+G AV+L ++ G++PD +T+ LL CS + F+ M P +
Sbjct: 273 SGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDL 332
Query: 180 RHYGCMVDMYGRAGLFEEAE 199
Y M+ +YGR GL EAE
Sbjct: 333 WTYNAMISVYGRCGLAAEAE 352
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 94/215 (43%), Gaps = 14/215 (6%)
Query: 6 VISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWVH 65
+++ ++L+ Y G +AVA+ QMV+ P+ T +
Sbjct: 80 IVTLSSLLNGYCHGKRISDAVALVDQMVE-MGYRPDTITFTTLIHGLFLHNKASEAVALV 138
Query: 66 SYIDTRG---DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLE----HKDFISWGTVICG 118
+ RG +LV G + N L K GD+ + + + +E D + + T+I
Sbjct: 139 DRMVQRGCQPNLVTYGVVVNGL----CKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDS 194
Query: 119 LAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLL-CRCSHKGLVSEGTMFFKAMRDSYLVP 177
L H +A+ LF M +G++P+ VT+ L+ C CS+ G S+ + M + + P
Sbjct: 195 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY-GRWSDASQLLSDMIEKKINP 253
Query: 178 QMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGP 212
+ + ++D + + G F EAE M+ + P
Sbjct: 254 NLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDP 288
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 96/218 (44%), Gaps = 14/218 (6%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
+ D+++ +L+ + G +AVA+ QMV+ +P+ T
Sbjct: 145 EPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM-GYKPDTVTFTTLIHGLFLHNKASEAV 203
Query: 63 WVHSYIDTRG---DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLE----HKDFISWGTV 115
+ + RG DLV G + N L K GD + L + + +E + + + TV
Sbjct: 204 ALIDRMVQRGCQPDLVTYGAVVNGL----CKRGDTDLALNLLNKMEAAKIEANVVIYSTV 259
Query: 116 ICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLL-CRCSHKGLVSEGTMFFKAMRDSY 174
I L H +A+ LF+ M +GV+P+ +T+ L+ C C++ G S+ + M +
Sbjct: 260 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY-GRWSDASRLLSDMIERK 318
Query: 175 LVPQMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGP 212
+ P + + ++D + + G +AE M+ + P
Sbjct: 319 INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDP 356
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 82 NALLNMYVKCGDMHMGLTIFDMLEHKDF----ISWGTVICGLAMNGHGKEAVQLFSLMLV 137
N L++ Y G M + + + K F ++ TVI GL +G + A ++F+ ML
Sbjct: 274 NTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLR 333
Query: 138 QGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEE 197
G+ PD T+ LL KG V E F MR +VP + + M+ ++ R+G ++
Sbjct: 334 SGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDK 393
Query: 198 AEAFLRAM 205
A + ++
Sbjct: 394 ALMYFNSV 401
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 94/215 (43%), Gaps = 14/215 (6%)
Query: 6 VISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWVH 65
+++ +L+ + G EAVA+ QMV+ +P+ T +
Sbjct: 135 IVTLNSLLNGFCHGNRISEAVALVDQMVEM-GYQPDTVTFTTLVHGLFQHNKASEAVALV 193
Query: 66 SYIDTRG---DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLE----HKDFISWGTVICG 118
+ +G DLV G A++N K G+ + L + + +E D + + TVI
Sbjct: 194 ERMVVKGCQPDLVTYG----AVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDS 249
Query: 119 LAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLL-CRCSHKGLVSEGTMFFKAMRDSYLVP 177
L H +A+ LF+ M +G++PD T+ L+ C C++ G S+ + M + + P
Sbjct: 250 LCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY-GRWSDASRLLSDMLERKINP 308
Query: 178 QMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGP 212
+ + ++D + + G EAE M+ + P
Sbjct: 309 NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 343
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 73/196 (37%), Gaps = 10/196 (5%)
Query: 1 MSQR----DVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXX 56
MS+R + +++TTL+ + + C+ A VFKQMV PN T
Sbjct: 406 MSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVS-DGVHPNIMTYNTLLDGLCKNG 464
Query: 57 XXXXXQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHK----DFISW 112
V Y+ + + N + K G + G +F L K D I++
Sbjct: 465 KLEKAMVVFEYLQ-KSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAY 523
Query: 113 GTVICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRD 172
T+I G G +EA LF M G PD T+ L+ G + K MR
Sbjct: 524 NTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRS 583
Query: 173 SYLVPQMRHYGCMVDM 188
YG + DM
Sbjct: 584 CRFAGDASTYGLVTDM 599
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 93/207 (44%), Gaps = 6/207 (2%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
+ DV+ + ++ AY + E+A+++FK M + + P+E T Q
Sbjct: 512 RNDVLEYNVMIKAYGKAKLHEKALSLFKGMKN-QGTWPDECTYNSLFQMLAGVDLVDEAQ 570
Query: 63 WVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEH----KDFISWGTVICG 118
+ + + G G A++ YV+ G + + +++ +E + + +G++I G
Sbjct: 571 RILAEMLDSG-CKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLING 629
Query: 119 LAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQ 178
A +G +EA+Q F +M GVQ + + L+ S G + E + M+DS P
Sbjct: 630 FAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPD 689
Query: 179 MRHYGCMVDMYGRAGLFEEAEAFLRAM 205
+ M+ + G+ EAE+ A+
Sbjct: 690 VAASNSMLSLCADLGIVSEAESIFNAL 716
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 92/209 (44%), Gaps = 14/209 (6%)
Query: 6 VISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWVH 65
+++ +L+ + G EAVA+ QMV+ +P+ T +
Sbjct: 145 IVTLNSLLNGFCHGNRISEAVALVDQMVE-MGYQPDTVTFTTLVHGLFQHNKASEAVALV 203
Query: 66 SYIDTRG---DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLE----HKDFISWGTVICG 118
+ +G DLV G A++N K G+ + L + + +E D + + T+I G
Sbjct: 204 ERMVVKGCQPDLVTYG----AVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDG 259
Query: 119 LAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLL-CRCSHKGLVSEGTMFFKAMRDSYLVP 177
L H +A LF+ M +G++PD T+ L+ C C++ G S+ + M + + P
Sbjct: 260 LCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNY-GRWSDASRLLSDMLEKNINP 318
Query: 178 QMRHYGCMVDMYGRAGLFEEAEAFLRAML 206
+ + ++D + + G EAE M+
Sbjct: 319 DLVFFNALIDAFVKEGKLVEAEKLYDEMV 347
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 82/201 (40%), Gaps = 45/201 (22%)
Query: 1 MSQR----DVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXX 56
MSQR + +++TTL+ + + C+ A VFKQMV
Sbjct: 382 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS---------------------- 419
Query: 57 XXXXXQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKD----FISW 112
VH I T N LL+ G++ L +F+ ++ +D +++
Sbjct: 420 -----DGVHPDIMTY----------NILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTY 464
Query: 113 GTVICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRD 172
T+I L G ++ LF + ++GV+P+ VT+ ++ KGL E F M++
Sbjct: 465 TTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKE 524
Query: 173 SYLVPQMRHYGCMVDMYGRAG 193
+P Y ++ R G
Sbjct: 525 DGPLPNSGTYNTLIRARLRDG 545
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 94/217 (43%), Gaps = 9/217 (4%)
Query: 5 DVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWV 64
D++ + L+ A+V+ G EA ++ +MV + P+ V
Sbjct: 319 DLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEV 378
Query: 65 HSYIDTRGDLVVGGNIG-NALLNMYVKCGDMHMGLTIFDMLE----HKDFISWGTVICGL 119
+ RG +VG + L++ + + D +F + H D +++ ++ GL
Sbjct: 379 FREMSQRG--LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGL 436
Query: 120 AMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQM 179
NG+ + A+ +F M + ++ D VT+ ++ G V +G F ++ + P +
Sbjct: 437 CNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNV 496
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGPIWGA 216
Y M+ + R GL EEA+A M + +GP+ +
Sbjct: 497 VTYTTMMSGFCRKGLKEEADALFVEM--KEDGPLPNS 531
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 94/217 (43%), Gaps = 12/217 (5%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
+ D I+++TLV + G EAVA+ +MV+ ++ P+ T
Sbjct: 137 EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQ-RPDLVTVSTLINGLCLKGRVSEAL 195
Query: 63 WVHSYIDTRG---DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDF----ISWGTV 115
+ + G D V G + LN K G+ + L +F +E ++ + + V
Sbjct: 196 VLIDRMVEYGFQPDEVTYGPV----LNRLCKSGNSALALDLFRKMEERNIKASVVQYSIV 251
Query: 116 ICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYL 175
I L +G +A+ LF+ M ++G++ D VT+ L+ + G +G + M +
Sbjct: 252 IDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNI 311
Query: 176 VPQMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGP 212
+P + + ++D++ + G EA+ M+ P
Sbjct: 312 IPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP 348
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%)
Query: 106 HKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTM 165
H D +++GT++ G+ G K A+ L S M ++PD V + ++ R G S+
Sbjct: 258 HIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQY 317
Query: 166 FFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGP 212
F M + + P + Y CM+D + G + +A+ LR M+ P
Sbjct: 318 LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP 364
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%)
Query: 106 HKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTM 165
H D +++GT++ G+ G K A+ L S M ++PD V + ++ R G S+
Sbjct: 258 HIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQY 317
Query: 166 FFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGP 212
F M + + P + Y CM+D + G + +A+ LR M+ P
Sbjct: 318 LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP 364
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 58.5 bits (140), Expect = 3e-09, Method: Composition-based stats.
Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 42/206 (20%)
Query: 5 DVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWV 64
+VI++ L+ Y + G E+AV V ++++ R+ PN T
Sbjct: 392 NVITYNALINGYCKRGMIEDAVDVV-ELMESRKLSPNTRTY------------------- 431
Query: 65 HSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFD-MLEHK---DFISWGTVICGLA 120
N L+ Y K ++H + + + MLE K D +++ ++I G
Sbjct: 432 -----------------NELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQC 473
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
+G+ A +L SLM +G+ PD T+ ++ V E F ++ + P +
Sbjct: 474 RSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVV 533
Query: 181 HYGCMVDMYGRAGLFEEAEAFLRAML 206
Y ++D Y +AG +EA L ML
Sbjct: 534 MYTALIDGYCKAGKVDEAHLMLEKML 559
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 92/215 (42%), Gaps = 22/215 (10%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
+ D++++ T++ Y + G ++A+ + M + R E ++ T
Sbjct: 254 KPDIVTYNTMIKGYCKAGQTQKAMEKLRDM-ETRGHEADKITYMTMIQACYADSDFGSCV 312
Query: 63 WVHSYIDTRG--------DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHK----DFI 110
++ +D +G LV+GG K G ++ G T+F+ + K +
Sbjct: 313 ALYQEMDEKGIQVPPHAFSLVIGG---------LCKEGKLNEGYTVFENMIRKGSKPNVA 363
Query: 111 SWGTVICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAM 170
+ +I G A +G ++A++L M+ +G +PD VT+ ++ G V E +F
Sbjct: 364 IYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTC 423
Query: 171 RDSYLVPQMRHYGCMVDMYGRAGLFEEAEAFLRAM 205
R L Y ++D G+AG +EAE M
Sbjct: 424 RFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEM 458
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 92/218 (42%), Gaps = 14/218 (6%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
+ ++++ ++L+ Y EAVA+ QM +PN T
Sbjct: 148 EPNIVTLSSLLNGYCHSKRISEAVALVDQMF-VTGYQPNTVTFNTLIHGLFLHNKASEAM 206
Query: 63 WVHSYIDTRG---DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDF----ISWGTV 115
+ + +G DLV G + N L K GD + + + +E + + T+
Sbjct: 207 ALIDRMVAKGCQPDLVTYGVVVNGL----CKRGDTDLAFNLLNKMEQGKLEPGVLIYNTI 262
Query: 116 ICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLL-CRCSHKGLVSEGTMFFKAMRDSY 174
I GL H +A+ LF M +G++P+ VT+ L+ C C++ G S+ + M +
Sbjct: 263 IDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY-GRWSDASRLLSDMIERK 321
Query: 175 LVPQMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGP 212
+ P + + ++D + + G EAE M+ + P
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 85/207 (41%), Gaps = 10/207 (4%)
Query: 5 DVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWV 64
DV+++ TL+ + + EE + VF++M R N T Q +
Sbjct: 395 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQ-RGLVGNTVTYNILIQGLFQAGDCDMAQEI 453
Query: 65 HSYIDTRGDLVVGGNI--GNALLNMYVKCGDMHMGLTIFDMLEHKD----FISWGTVICG 118
+ + G V NI N LL+ K G + + +F+ L+ ++ +I G
Sbjct: 454 FKEMVSDG---VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG 510
Query: 119 LAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQ 178
+ G ++ LF + ++GV+PD V + ++ KG E FK M++ +P
Sbjct: 511 MCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPN 570
Query: 179 MRHYGCMVDMYGRAGLFEEAEAFLRAM 205
Y ++ R G E + ++ M
Sbjct: 571 SGCYNTLIRARLRDGDREASAELIKEM 597
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 66/134 (49%), Gaps = 6/134 (4%)
Query: 79 NIG--NALLNMYVKCGDMHMGLTIF----DMLEHKDFISWGTVICGLAMNGHGKEAVQLF 132
N+G N ++N Y G + +F D D +S+ ++ L N EA +L+
Sbjct: 349 NLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLY 408
Query: 133 SLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRA 192
M + V+PD+ T+ L+ C +G + EG ++K M +S L P + Y + D +A
Sbjct: 409 GEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKA 468
Query: 193 GLFEEAEAFLRAML 206
G ++A++F M+
Sbjct: 469 GKLDDAKSFFDMMV 482
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 4/137 (2%)
Query: 73 DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHK----DFISWGTVICGLAMNGHGKEA 128
D+V A+++++VK G + +++ + + D ++ ++I GL M+G EA
Sbjct: 239 DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEA 298
Query: 129 VQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDM 188
Q+ LM+ +G PD VT+ L+ V EGT F+ M LV Y ++
Sbjct: 299 KQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQG 358
Query: 189 YGRAGLFEEAEAFLRAM 205
Y +AG + A+ M
Sbjct: 359 YFQAGRPDAAQEIFSRM 375
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 56/136 (41%), Gaps = 5/136 (3%)
Query: 82 NALLNMYVKCGDMHMGLTIFDMLEHK-----DFISWGTVICGLAMNGHGKEAVQLFSLML 136
NALL+ YV + + F L K D +++ T+I L G + + +F +
Sbjct: 161 NALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELE 220
Query: 137 VQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFE 196
G +PD ++F LL + L EG + M+ L P +R Y V R F
Sbjct: 221 KNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFT 280
Query: 197 EAEAFLRAMLVEAEGP 212
+A + M E P
Sbjct: 281 DALNLIDVMKTEGISP 296
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 35/202 (17%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
++DV S+ TL+ A +GG + A + QM + PN
Sbjct: 371 EQDVFSYNTLLDAICKGGQMDLAFEILAQM-PVKRIMPN--------------------- 408
Query: 63 WVHSYIDTRGDLVVGGNIGNALLNMYVKCGDM-HMGLTIFDMLEHKDFISWGTVICGLAM 121
V SY G A LN++ G+M ++G+ + D +S+ T++
Sbjct: 409 -VVSYSTVIDGFAKAGRFDEA-LNLF---GEMRYLGIAL-------DRVSYNTLLSIYTK 456
Query: 122 NGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRH 181
G +EA+ + M G++ D VT+ LL +G E F M+ +++P +
Sbjct: 457 VGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLT 516
Query: 182 YGCMVDMYGRAGLFEEAEAFLR 203
Y ++D Y + GL++EA R
Sbjct: 517 YSTLIDGYSKGGLYKEAMEIFR 538
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 95/218 (43%), Gaps = 14/218 (6%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
+ +++ ++L+ Y G +AVA+ QMV+ P+ T
Sbjct: 152 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM-GYRPDTITFTTLIHGLFLHNKASEAV 210
Query: 63 WVHSYIDTRG---DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLE----HKDFISWGTV 115
+ + RG +LV G + N L K GD+ + + + +E + + + TV
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGL----CKRGDIDLAFNLLNKMEAAKIEANVVIYSTV 266
Query: 116 ICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLL-CRCSHKGLVSEGTMFFKAMRDSY 174
I L H +A+ LF+ M +GV+P+ +T+ L+ C C+++ S+ + M +
Sbjct: 267 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERW-SDASRLLSDMIERK 325
Query: 175 LVPQMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGP 212
+ P + + ++D + + G EAE M+ + P
Sbjct: 326 INPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDP 363
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 94/223 (42%), Gaps = 15/223 (6%)
Query: 5 DVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWV 64
DV+++++++ +GG E + ++M + PN T +
Sbjct: 258 DVVTFSSIINRLCKGGKVLEGGLLLREMEEM-SVYPNHVTYTTLVDSLFKANIYRHALAL 316
Query: 65 HSYIDTRG---DLVVGGNIGNALLNMYVKCGDMHMGLTIFDML----EHKDFISWGTVIC 117
+S + RG DLVV L++ K GD+ F ML + + +++ ++
Sbjct: 317 YSQMVVRGIPVDLVVY----TVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVD 372
Query: 118 GLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVP 177
GL G A + + ML + V P+ VT+ ++ KG++ E + M D +VP
Sbjct: 373 GLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVP 432
Query: 178 QMRHYGCMVDMYGRAGLFE---EAEAFLRAMLVEAEGPIWGAL 217
YG ++D +AG E E +R + VE I AL
Sbjct: 433 NGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDAL 475
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 55.1 bits (131), Expect = 3e-08, Method: Composition-based stats.
Identities = 46/204 (22%), Positives = 82/204 (40%), Gaps = 41/204 (20%)
Query: 6 VISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWVH 65
+++W L+ A+ + G +EA+ K+M
Sbjct: 212 LVTWGILIDAFCKAGKMDEAMGFLKEM--------------------------------- 238
Query: 66 SYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFD-MLEHKD---FISWGTVICGLAM 121
++ DLVV +L+ + CG++ G +FD +LE D I++ T+I G
Sbjct: 239 KFMGLEADLVVY----TSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK 294
Query: 122 NGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRH 181
G KEA ++F M+ +GV+P+ T+ GL+ G E M + P
Sbjct: 295 LGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVT 354
Query: 182 YGCMVDMYGRAGLFEEAEAFLRAM 205
Y +++ + GL +A + M
Sbjct: 355 YNIIINKLCKDGLVADAVEIVELM 378
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 82 NALLNMYVKCGDMHMGLTIFDMLE----HKDFISWGTVICGLAMNGHGKEAVQLFSLMLV 137
N L++ + K IFD +E ++ +++ T+I GL + ++A QL M++
Sbjct: 474 NTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIM 533
Query: 138 QGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEE 197
+G +PD T+ LL G + + +AM + P + YG ++ +AG E
Sbjct: 534 EGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEV 593
Query: 198 AEAFLRAM 205
A LR++
Sbjct: 594 ASKLLRSI 601
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 54.7 bits (130), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 63/135 (46%), Gaps = 4/135 (2%)
Query: 82 NALLNMYVKCGDMHMGLTIFDMLEHK----DFISWGTVICGLAMNGHGKEAVQLFSLMLV 137
N+++N + GD + L + +E + D ++ T+I L +G A+ LF M
Sbjct: 197 NSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMET 256
Query: 138 QGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEE 197
+G++ VT+ L+ G ++G + K M +VP + + ++D++ + G +E
Sbjct: 257 KGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQE 316
Query: 198 AEAFLRAMLVEAEGP 212
A + M+ P
Sbjct: 317 ANELYKEMITRGISP 331
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 93/208 (44%), Gaps = 6/208 (2%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
Q + +++ L+ +Y R + EA+ VF QM + +P+ T
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEA-GCKPDRVTYCTLIDIHAKAGFLDIAM 454
Query: 63 WVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIF-DMLEH---KDFISWGTVICG 118
++ + G L + ++N K G + +F +M++ + +++ ++
Sbjct: 455 DMYQRMQA-GGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDL 513
Query: 119 LAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQ 178
A + + A++L+ M G +PD VT+ ++ H G + E F M+ +P
Sbjct: 514 HAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPD 573
Query: 179 MRHYGCMVDMYGRAGLFEEAEAFLRAML 206
YG +VD++G+AG E+A + +AML
Sbjct: 574 EPVYGLLVDLWGKAGNVEKAWQWYQAML 601
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 10/173 (5%)
Query: 5 DVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWV 64
DV+S+ TL+ + + E+ + +F++M R N T Q
Sbjct: 329 DVVSYNTLINGFCKAKRVEDGMKLFREMSQ-RGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387
Query: 65 HSYIDTRGDLVVGGNI--GNALLNMYVKCGDMHMGLTIFDMLEHK----DFISWGTVICG 118
S +D G + +I N LL G++ L IF+ ++ + D +++ TVI G
Sbjct: 388 FSQMDFFG---ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRG 444
Query: 119 LAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMR 171
+ G +EA LF + ++G++PD VT+ ++ KGL+ E + M+
Sbjct: 445 MCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMK 497
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 54.3 bits (129), Expect = 5e-08, Method: Composition-based stats.
Identities = 46/212 (21%), Positives = 92/212 (43%), Gaps = 6/212 (2%)
Query: 5 DVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWV 64
+V+++ TL+ Y + ++ + + M + EPN + +V
Sbjct: 239 NVVTYNTLIDGYCKLRKIDDGFKLLRSMA-LKGLEPNLISYNVVINGLCREGRMKEVSFV 297
Query: 65 HSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIF-DMLEH---KDFISWGTVICGLA 120
+ ++ RG + N L+ Y K G+ H L + +ML H I++ ++I +
Sbjct: 298 LTEMNRRG-YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMC 356
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMR 180
G+ A++ M V+G+ P++ T+ L+ S KG ++E + M D+ P +
Sbjct: 357 KAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVV 416
Query: 181 HYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGP 212
Y +++ + G E+A A L M + P
Sbjct: 417 TYNALINGHCVTGKMEDAIAVLEDMKEKGLSP 448
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 93/208 (44%), Gaps = 6/208 (2%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
Q + +++ L+ +Y R + EA+ VF QM + +P+ T
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEA-GCKPDRVTYCTLIDIHAKAGFLDIAM 454
Query: 63 WVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIF-DMLEH---KDFISWGTVICG 118
++ + G L + ++N K G + +F +M++ + +++ ++
Sbjct: 455 DMYQRMQA-GGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDL 513
Query: 119 LAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQ 178
A + + A++L+ M G +PD VT+ ++ H G + E F M+ +P
Sbjct: 514 HAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPD 573
Query: 179 MRHYGCMVDMYGRAGLFEEAEAFLRAML 206
YG +VD++G+AG E+A + +AML
Sbjct: 574 EPVYGLLVDLWGKAGNVEKAWQWYQAML 601
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 93/208 (44%), Gaps = 6/208 (2%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
Q + +++ L+ +Y R + EA+ VF QM + +P+ T
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEA-GCKPDRVTYCTLIDIHAKAGFLDIAM 454
Query: 63 WVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIF-DMLEH---KDFISWGTVICG 118
++ + G L + ++N K G + +F +M++ + +++ ++
Sbjct: 455 DMYQRMQA-GGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDL 513
Query: 119 LAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQ 178
A + + A++L+ M G +PD VT+ ++ H G + E F M+ +P
Sbjct: 514 HAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPD 573
Query: 179 MRHYGCMVDMYGRAGLFEEAEAFLRAML 206
YG +VD++G+AG E+A + +AML
Sbjct: 574 EPVYGLLVDLWGKAGNVEKAWQWYQAML 601
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
Query: 82 NALLNMYVKCGDMHMGLTIFDMLEHK----DFISWGTVICGLAMNGHGKEAVQLFSLMLV 137
N+L++MYV+ G+ I LE D +S+ TVI G G +EAV++ S M
Sbjct: 670 NSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTE 729
Query: 138 QGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEE 197
+G++P T+ + + G+ +E + M + P + +VD Y RAG + E
Sbjct: 730 RGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSE 789
Query: 198 AEAFL 202
A F+
Sbjct: 790 AMDFV 794
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 82/200 (41%), Gaps = 9/200 (4%)
Query: 5 DVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWV 64
DV + + +V AY R G+ ++A+ K+ E N T V
Sbjct: 224 DVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRV 283
Query: 65 HSYIDTRGDLVVGGNI--GNALLNMYVKCGDMHMGLTIFDMLEHKDFIS----WGTVICG 118
+ RG V N+ +L+ Y K G M +F++L+ K ++ +G ++ G
Sbjct: 284 LRLMSERG---VSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDG 340
Query: 119 LAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQ 178
G ++AV++ M+ GV+ + L+ G + E F M D L P
Sbjct: 341 YCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPD 400
Query: 179 MRHYGCMVDMYGRAGLFEEA 198
Y +VD Y RAG +EA
Sbjct: 401 HHTYNTLVDGYCRAGYVDEA 420
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 83/210 (39%), Gaps = 45/210 (21%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
R+V+++T+L+ Y + G EEA VF+ + + +
Sbjct: 293 SRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKK-------------------------- 326
Query: 63 WVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFD-MLEHKDFISWGTVICGLAM 121
LV ++ L++ Y + G + + + D M+E + T IC +
Sbjct: 327 -----------LVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIG--VRTNTTICNSLI 373
Query: 122 NGHGK-----EAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV 176
NG+ K EA Q+FS M ++PD T+ L+ G V E M +V
Sbjct: 374 NGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVV 433
Query: 177 PQMRHYGCMVDMYGRAGLFEEAEAFLRAML 206
P + Y ++ Y R G F + + + ML
Sbjct: 434 PTVMTYNILLKGYSRIGAFHDVLSLWKMML 463
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 96/218 (44%), Gaps = 14/218 (6%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
+ D+++ +L+ + G +AV++ QMV+ +P+ T
Sbjct: 148 EPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM-GYQPDSFTFNTLIHGLFRHNRASEAV 206
Query: 63 WVHSYIDTRG---DLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDF----ISWGTV 115
+ + +G DLV G + N L K GD+ + L++ +E + + T+
Sbjct: 207 ALVDRMVVKGCQPDLVTYGIVVNGL----CKRGDIDLALSLLKKMEQGKIEPGVVIYNTI 262
Query: 116 ICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLL-CRCSHKGLVSEGTMFFKAMRDSY 174
I L + +A+ LF+ M +G++P+ VT+ L+ C C++ G S+ + M +
Sbjct: 263 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY-GRWSDASRLLSDMIERK 321
Query: 175 LVPQMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGP 212
+ P + + ++D + + G EAE M+ + P
Sbjct: 322 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 359
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 84/213 (39%), Gaps = 45/213 (21%)
Query: 1 MSQR----DVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXX 56
MSQR + +++TTL+ + + C+ A VFKQMV P+ T
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVS-DGVLPDIMTY----------- 469
Query: 57 XXXXXQWVHSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHK----DFISW 112
+ LL+ G + L +F+ L+ D ++
Sbjct: 470 -------------------------SILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTY 504
Query: 113 GTVICGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRD 172
+I G+ G ++ LF + ++GV+P+ VT+ ++ KGL E F+ M++
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKE 564
Query: 173 SYLVPQMRHYGCMVDMYGRAGLFEEAEAFLRAM 205
+P Y ++ + R G + +R M
Sbjct: 565 EGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 4/128 (3%)
Query: 82 NALLNMYVKCGDMHMGLTIF-DMLEHK---DFISWGTVICGLAMNGHGKEAVQLFSLMLV 137
N ++N+Y K +M ++ +M H+ + ++ ++ A G ++A ++F +
Sbjct: 268 NLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQE 327
Query: 138 QGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEE 197
G++PD + L+ S G F M+ P Y MVD YGRAGL +
Sbjct: 328 DGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSD 387
Query: 198 AEAFLRAM 205
AEA M
Sbjct: 388 AEAVFEEM 395
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 86/216 (39%), Gaps = 10/216 (4%)
Query: 3 QRDVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQ 62
+ +V+++TTL+ + H AV +F QM + PN T
Sbjct: 185 KPNVVTYTTLIRCLCKNRHLNHAVELFNQM-GTNGSRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 63 WVHSYIDTRGDLVVGGNI--GNALLNMYVKCGDMHMGLTIFD----MLEHKDFISWGTVI 116
W+ + R + N+ AL++ +VK G + +++ M + D ++G++I
Sbjct: 244 WLLRDMMKRR---IEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Query: 117 CGLAMNGHGKEAVQLFSLMLVQGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLV 176
GL M G EA Q+F LM G P++V + L+ V +G F M +V
Sbjct: 301 NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV 360
Query: 177 PQMRHYGCMVDMYGRAGLFEEAEAFLRAMLVEAEGP 212
Y ++ Y G + A+ M P
Sbjct: 361 ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPP 396
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 4/128 (3%)
Query: 82 NALLNMYVKCGDMHMGLTIF-DMLEHK---DFISWGTVICGLAMNGHGKEAVQLFSLMLV 137
N ++N+Y K +M ++ +M H+ + ++ ++ A G ++A ++F +
Sbjct: 290 NLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQE 349
Query: 138 QGVQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEE 197
G++PD + L+ S G F M+ P Y MVD YGRAGL +
Sbjct: 350 DGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSD 409
Query: 198 AEAFLRAM 205
AEA M
Sbjct: 410 AEAVFEEM 417
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Query: 82 NALLNMYVKCGDMHMGLTIFDMLE-HKDFISWGTVICGLAMNGHGKEAVQLFSLMLVQGV 140
N +++ Y K G+++ L++ D + D +++ T++ L +G K+A+++ ML +
Sbjct: 176 NVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDC 235
Query: 141 QPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAEA 200
PD +T+ L+ V MRD P + Y +V+ + G +EA
Sbjct: 236 YPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIK 295
Query: 201 FLRAM 205
FL M
Sbjct: 296 FLNDM 300
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 4/127 (3%)
Query: 84 LLNMYVKCGDMHMGLTIFDML---EHK-DFISWGTVICGLAMNGHGKEAVQLFSLMLVQG 139
L+N ++ G +IF+ L HK I++ T++ L H + L S + G
Sbjct: 325 LMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNG 384
Query: 140 VQPDDVTFIGLLCRCSHKGLVSEGTMFFKAMRDSYLVPQMRHYGCMVDMYGRAGLFEEAE 199
++PD + F ++ S G + + F+ M++S P + ++ YG+ G EE+
Sbjct: 385 LKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESS 444
Query: 200 AFLRAML 206
L ML
Sbjct: 445 RLLDMML 451
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 88/206 (42%), Gaps = 7/206 (3%)
Query: 5 DVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWV 64
DV ++ L+ AY + G +E ++K+M E E N T +
Sbjct: 819 DVATYNFLLDAYGKSGKIDELFELYKEM-STHECEANTITHNIVISGLVKAGNVDDALDL 877
Query: 65 HSYIDTRGDLVVGGNIGNALLNMYVKCGDMHMGLTIFD-MLEH---KDFISWGTVICGLA 120
+ + + D L++ K G ++ +F+ ML++ + + +I G
Sbjct: 878 YYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFG 937
Query: 121 MNGHGKEAVQLFSLMLVQGVQPDDVTFIGLL-CRCSHKGLVSEGTMFFKAMRDSYLVPQM 179
G A LF M+ +GV+PD T+ L+ C C G V EG +FK +++S L P +
Sbjct: 938 KAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLC-MVGRVDEGLHYFKELKESGLNPDV 996
Query: 180 RHYGCMVDMYGRAGLFEEAEAFLRAM 205
Y +++ G++ EEA M
Sbjct: 997 VCYNLIINGLGKSHRLEEALVLFNEM 1022
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 89/204 (43%), Gaps = 39/204 (19%)
Query: 5 DVISWTTLVMAYVRGGHCEEAVAVFKQMVDCREAEPNEATXXXXXXXXXXXXXXXXXQWV 64
D +++ ++ Y + G +EA+ + +M++ EP+ V
Sbjct: 502 DSVTYNMMMKCYSKVGEIDEAIKLLSEMME-NGCEPDVIV-------------------V 541
Query: 65 HSYIDT--RGDLVVGGNIGNALLNMYVKCGDMHMGLTIFDMLEHKDFISWGTVICGLAMN 122
+S I+T + D V + M+++ +M + T+ +++ T++ GL N
Sbjct: 542 NSLINTLYKADRV------DEAWKMFMRMKEMKLKPTV---------VTYNTLLAGLGKN 586
Query: 123 GHGKEAVQLFSLMLVQGVQPDDVTFIGLL-CRCSHKGLVSEGTMFFKAMRDSYLVPQMRH 181
G +EA++LF M+ +G P+ +TF L C C + + M FK M D VP +
Sbjct: 587 GKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM-DMGCVPDVFT 645
Query: 182 YGCMVDMYGRAGLFEEAEAFLRAM 205
Y ++ + G +EA F M
Sbjct: 646 YNTIIFGLVKNGQVKEAMCFFHQM 669