Miyakogusa Predicted Gene

Lj0g3v0305559.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0305559.1 tr|E4X3Y0|E4X3Y0_OIKDI Whole genome shotgun
assembly, reference scaffold set, scaffold scaffold_10
O,35.55,3e-18,PATTERN FORMATION PROTEIN,NULL; GUANYL-NUCLEOTIDE
EXCHANGE FACTOR,NULL; seg,NULL,CUFF.20573.1
         (553 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G13980.2 | Symbols: GN | sec7 domain-containing protein | chr...   681   0.0  
AT1G13980.1 | Symbols: GN, VAN7, EMB30 | sec7 domain-containing ...   681   0.0  
AT5G39500.1 | Symbols: GNL1, ERMO1 | GNOM-like 1 | chr5:15815274...   548   e-156
AT5G19610.1 | Symbols: GNL2 | GNOM-like 2 | chr5:6617746-6622045...   229   5e-60

>AT1G13980.2 | Symbols: GN | sec7 domain-containing protein |
            chr1:4789587-4794397 FORWARD LENGTH=1451
          Length = 1451

 Score =  681 bits (1758), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/542 (64%), Positives = 403/542 (74%), Gaps = 2/542 (0%)

Query: 1    MANDAAEESELSSETGHGKRXXXXXXXXXXXXXXTPKRSLGLMSRFSQLLYLGTEESRSV 60
            +A+DAA+ESE SSE G GK               TP+RS GLM RFSQLL L TEE RS 
Sbjct: 911  VASDAADESEHSSEQGQGKPLANSLSSAHLQSMGTPRRSSGLMGRFSQLLSLDTEEPRSQ 970

Query: 61   PSEEQHAAQQSAFETIQKCHIDSIFTESKFLQAESLLQLVKALNSAGVRPKKGHSTPEDE 120
            P+E+Q AA Q   +TIQKCHIDSIFTESKFLQAESLLQL +AL  A  RP+KG S+PEDE
Sbjct: 971  PTEQQLAAHQRTLQTIQKCHIDSIFTESKFLQAESLLQLARALIWAAGRPQKGTSSPEDE 1030

Query: 121  DTSVFCLELLVAITLNNRDRIELLWQGVYEHISNIVQSTVMPCALVEKAVFGLLRICHRL 180
            DT+VFCLELL+AITLNNRDRI LLWQGVYEHI+ I QSTVMPC LV+KA+FGLLRIC RL
Sbjct: 1031 DTAVFCLELLIAITLNNRDRIVLLWQGVYEHIATIAQSTVMPCNLVDKAIFGLLRICQRL 1090

Query: 181  LPYKENMTDELLRSLQLVLKLDARVADTYYEQITQDVSHLVKANASHIRSQLGWRTITSL 240
            LPYKE++ DELLRSLQLVLKLDARVAD Y EQI  +VS LVKANA+HIRSQ GWRTITSL
Sbjct: 1091 LPYKESLADELLRSLQLVLKLDARVADAYCEQIAIEVSRLVKANANHIRSQAGWRTITSL 1150

Query: 241  LSITARHLESSEAGFDALLFIMSDGAHLLPANYVLCIDAAKQFAESRVGQVERSVVALDL 300
            LSITARH E+SE+GFDA+ F+MS+G HL PANYVLC+DAA+QFAESRVGQ ERS+ ALDL
Sbjct: 1151 LSITARHPEASESGFDAVSFVMSEGTHLYPANYVLCVDAARQFAESRVGQSERSIRALDL 1210

Query: 301  MAGSVNCLEKWANDAKQAMKEEEVAKMLQDIGDMWXXXXXXXXXXXXDQREEVRNHALLS 360
            M  S+  L KWA  AK+ M EE+  KM QDIG+MW            DQRE+VRNHAL S
Sbjct: 1211 MGDSLEFLAKWALSAKENMGEEDFGKMSQDIGEMWLRLVQGLRKVCLDQREDVRNHALQS 1270

Query: 361  LQNCLTGSVGIHLPHDLWLQCFDQVIFTVLDDLLEISQTLSPKDYRNMEGTXXXXXXXXX 420
            LQ CL G  GI+L H +W QCFD+VIFTVLDDLLEI+   S KDYRNMEGT         
Sbjct: 1271 LQKCLGGVDGINLAHSMWSQCFDKVIFTVLDDLLEIAAG-SQKDYRNMEGTLLLAIKLLS 1329

Query: 421  XXXXXXXXXXSQLPDFSKLWLSVLNRLEIYMKVKFRGRRSEKLQELVPELLKNTLLVMKA 480
                      SQL  F KLWL VL R+E YMKVK RG++S+KLQE VPELLKN LLVMK 
Sbjct: 1330 KVFLQQLQELSQLSTFCKLWLGVLTRMEKYMKVKVRGKKSDKLQESVPELLKNILLVMKT 1389

Query: 481  -GSVLARSSSEGNSFWELTWLHINNIAPSLQSEVFPEQDSEHLQHKQTEQIGGSGPDGNV 539
             G +L RS+  G+S WELTWLH+NNIAPS++ E+FP+Q+S  L   +T   G S P+   
Sbjct: 1390 KGVLLQRSALGGDSLWELTWLHVNNIAPSMRLELFPDQESSQLGDDETVSNGLSSPENTT 1449

Query: 540  SA 541
             +
Sbjct: 1450 GS 1451


>AT1G13980.1 | Symbols: GN, VAN7, EMB30 | sec7 domain-containing
            protein | chr1:4789587-4794397 FORWARD LENGTH=1451
          Length = 1451

 Score =  681 bits (1758), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/542 (64%), Positives = 403/542 (74%), Gaps = 2/542 (0%)

Query: 1    MANDAAEESELSSETGHGKRXXXXXXXXXXXXXXTPKRSLGLMSRFSQLLYLGTEESRSV 60
            +A+DAA+ESE SSE G GK               TP+RS GLM RFSQLL L TEE RS 
Sbjct: 911  VASDAADESEHSSEQGQGKPLANSLSSAHLQSMGTPRRSSGLMGRFSQLLSLDTEEPRSQ 970

Query: 61   PSEEQHAAQQSAFETIQKCHIDSIFTESKFLQAESLLQLVKALNSAGVRPKKGHSTPEDE 120
            P+E+Q AA Q   +TIQKCHIDSIFTESKFLQAESLLQL +AL  A  RP+KG S+PEDE
Sbjct: 971  PTEQQLAAHQRTLQTIQKCHIDSIFTESKFLQAESLLQLARALIWAAGRPQKGTSSPEDE 1030

Query: 121  DTSVFCLELLVAITLNNRDRIELLWQGVYEHISNIVQSTVMPCALVEKAVFGLLRICHRL 180
            DT+VFCLELL+AITLNNRDRI LLWQGVYEHI+ I QSTVMPC LV+KA+FGLLRIC RL
Sbjct: 1031 DTAVFCLELLIAITLNNRDRIVLLWQGVYEHIATIAQSTVMPCNLVDKAIFGLLRICQRL 1090

Query: 181  LPYKENMTDELLRSLQLVLKLDARVADTYYEQITQDVSHLVKANASHIRSQLGWRTITSL 240
            LPYKE++ DELLRSLQLVLKLDARVAD Y EQI  +VS LVKANA+HIRSQ GWRTITSL
Sbjct: 1091 LPYKESLADELLRSLQLVLKLDARVADAYCEQIAIEVSRLVKANANHIRSQAGWRTITSL 1150

Query: 241  LSITARHLESSEAGFDALLFIMSDGAHLLPANYVLCIDAAKQFAESRVGQVERSVVALDL 300
            LSITARH E+SE+GFDA+ F+MS+G HL PANYVLC+DAA+QFAESRVGQ ERS+ ALDL
Sbjct: 1151 LSITARHPEASESGFDAVSFVMSEGTHLYPANYVLCVDAARQFAESRVGQSERSIRALDL 1210

Query: 301  MAGSVNCLEKWANDAKQAMKEEEVAKMLQDIGDMWXXXXXXXXXXXXDQREEVRNHALLS 360
            M  S+  L KWA  AK+ M EE+  KM QDIG+MW            DQRE+VRNHAL S
Sbjct: 1211 MGDSLEFLAKWALSAKENMGEEDFGKMSQDIGEMWLRLVQGLRKVCLDQREDVRNHALQS 1270

Query: 361  LQNCLTGSVGIHLPHDLWLQCFDQVIFTVLDDLLEISQTLSPKDYRNMEGTXXXXXXXXX 420
            LQ CL G  GI+L H +W QCFD+VIFTVLDDLLEI+   S KDYRNMEGT         
Sbjct: 1271 LQKCLGGVDGINLAHSMWSQCFDKVIFTVLDDLLEIAAG-SQKDYRNMEGTLLLAIKLLS 1329

Query: 421  XXXXXXXXXXSQLPDFSKLWLSVLNRLEIYMKVKFRGRRSEKLQELVPELLKNTLLVMKA 480
                      SQL  F KLWL VL R+E YMKVK RG++S+KLQE VPELLKN LLVMK 
Sbjct: 1330 KVFLQQLQELSQLSTFCKLWLGVLTRMEKYMKVKVRGKKSDKLQESVPELLKNILLVMKT 1389

Query: 481  -GSVLARSSSEGNSFWELTWLHINNIAPSLQSEVFPEQDSEHLQHKQTEQIGGSGPDGNV 539
             G +L RS+  G+S WELTWLH+NNIAPS++ E+FP+Q+S  L   +T   G S P+   
Sbjct: 1390 KGVLLQRSALGGDSLWELTWLHVNNIAPSMRLELFPDQESSQLGDDETVSNGLSSPENTT 1449

Query: 540  SA 541
             +
Sbjct: 1450 GS 1451


>AT5G39500.1 | Symbols: GNL1, ERMO1 | GNOM-like 1 |
            chr5:15815274-15819910 FORWARD LENGTH=1443
          Length = 1443

 Score =  548 bits (1412), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 284/533 (53%), Positives = 366/533 (68%), Gaps = 16/533 (3%)

Query: 1    MANDAAEESELSSETGHGKRXXXXXXXXXXXXXXT--PKRSLGLMSRFSQLLYLGTEESR 58
            +A+DAA++ ELS+     ++              +  P++S   + RF  LL   +EE++
Sbjct: 911  IASDAADDPELSTSNLEQEKPSANPVPVVSQSQPSAMPRKSSSFIGRF--LLSFDSEETK 968

Query: 59   SVPSEEQHAAQQSAFETIQKCHIDSIFTESKFLQAESLLQLVKALNSAGVRPKKGHSTPE 118
             +PSEE+ AA + A   ++ CHIDSIF++SKFLQAESL QLV +L  A         + +
Sbjct: 969  PLPSEEELAAYKHARGIVKDCHIDSIFSDSKFLQAESLQQLVNSLIRA---------SGK 1019

Query: 119  DEDTSVFCLELLVAITLNNRDRIELLWQGVYEHISNIVQSTVMPCALVEKAVFGLLRICH 178
            DE +SVFCLELL+A+TLNNRDRI L+W  VYEHI  IVQ T+ PC LVEKAVFG+L+IC 
Sbjct: 1020 DEASSVFCLELLIAVTLNNRDRILLIWPTVYEHILGIVQLTLTPCTLVEKAVFGVLKICQ 1079

Query: 179  RLLPYKENMTDELLRSLQLVLKLDARVADTYYEQITQDVSHLVKANASHIRSQLGWRTIT 238
            RLLPYKEN+TDELL+SLQLVLKL A+VAD Y E+I Q+V  LVKANASH+RS+ GWRTI 
Sbjct: 1080 RLLPYKENLTDELLKSLQLVLKLKAKVADAYCERIAQEVVRLVKANASHVRSRTGWRTII 1139

Query: 239  SLLSITARHLESSEAGFDALLFIMSDGAHLLPANYVLCIDAAKQFAESRVGQVERSVVAL 298
            SLLSITARH E+SEAGF+AL FIMS+GAHLLP+NY LC+DAA  FAESRVG+V+RS+ A+
Sbjct: 1140 SLLSITARHPEASEAGFEALRFIMSEGAHLLPSNYELCLDAASHFAESRVGEVDRSISAI 1199

Query: 299  DLMAGSVNCLEKWANDAKQAMKE-EEVAKMLQDIGDMWXXXXXXXXXXXXDQREEVRNHA 357
            DLM+ SV CL +W+ +AK ++ E + + K+ +DIG MW            DQR+EVRNHA
Sbjct: 1200 DLMSNSVFCLARWSQEAKNSIGETDAMMKLSEDIGKMWLKLVKNLKKVCLDQRDEVRNHA 1259

Query: 358  LLSLQNCLTGSVGIHLPHDLWLQCFDQVIFTVLDDLLEISQTLSPKDY-RNMEGTXXXXX 416
            +  LQ  + G+ GI LP  LW QCFD  +F +LDD+L  S   S K   + +E T     
Sbjct: 1260 ISMLQRAIAGADGIMLPQPLWFQCFDSAVFILLDDVLTFSIENSRKTLKKTVEETLVLAT 1319

Query: 417  XXXXXXXXXXXXXXSQLPDFSKLWLSVLNRLEIYMKVKFRGRRSEKLQELVPELLKNTLL 476
                          SQ P F +LW+ VLNRLE YM  +FRG+RSEK+ EL+PELLKNTLL
Sbjct: 1320 KLMSKAFLQSLQDISQQPSFCRLWVGVLNRLETYMSTEFRGKRSEKVNELIPELLKNTLL 1379

Query: 477  VMKAGSVLARSSSEG-NSFWELTWLHINNIAPSLQSEVFPEQDSEHLQHKQTE 528
            VMKA  VL      G +SFW+LTWLH+N I+PSLQSEVFP+++ +  Q +  +
Sbjct: 1380 VMKATGVLLPGDDIGSDSFWQLTWLHVNKISPSLQSEVFPQEELDQFQRRNAK 1432


>AT5G19610.1 | Symbols: GNL2 | GNOM-like 2 | chr5:6617746-6622045
            REVERSE LENGTH=1375
          Length = 1375

 Score =  229 bits (583), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 155/508 (30%), Positives = 252/508 (49%), Gaps = 40/508 (7%)

Query: 42   LMSRFSQLLYLGTEESRSVPSEEQHAAQQSAFE----TIQKCHIDSIFTESKFLQAESLL 97
            LM RFS  L L          EE  A   S FE     I++C I  IF++S  L   ++L
Sbjct: 876  LMGRFSHFLALDN-------VEESVALGMSEFEQNLKVIKQCRIGQIFSKSSVLPDVAVL 928

Query: 98   QLVKAL-NSAGVRPKKGHSTPEDEDTSVFCLELLVAITLNNRDRIELLWQGVYEHISNIV 156
             L ++L  +A  + +K  +  E+E+T  FC +L++ I L+N  R  + W   +E++ N+ 
Sbjct: 929  NLGRSLIYAAAGKGQKFSTAIEEEETVKFCWDLIITIALSNVHRFNMFWPSYHEYLLNVA 988

Query: 157  QSTVM-PCALVEKAVFGLLRICHRLLP--YKENMTDELL-RSLQLVLKLDARVADTYYEQ 212
               +  P   VEK + GL R+C ++L    ++++ +EL+ RSL ++ K+D  + +T Y+ 
Sbjct: 989  NFPLFSPIPFVEKGLPGLFRVCIKILASNLQDHLPEELIFRSLTIMWKIDKEIIETCYDT 1048

Query: 213  ITQDVSHLVKANASHIRSQLGWRTITSLLSITARHLESSEAGFDALLFIMS-DGAHLLPA 271
            IT+ VS ++   ++++ + +GW+++  LLS+  RH E+ E   DAL+ +MS + +HL  +
Sbjct: 1049 ITEFVSKIIIDYSANLHTNIGWKSVLQLLSLCGRHPETKEQAVDALIGLMSFNASHLSQS 1108

Query: 272  NYVLCIDAAKQFAESRVGQVERSVVALDLMAGSVNCLEKWANDAK--------------- 316
            +Y  CID A  F   R   VE+++  LDLMA SV  L KW   A                
Sbjct: 1109 SYAYCIDCAFSFVALRNSSVEKNLKILDLMADSVTMLVKWYKTASTDTANSYSPASNTSS 1168

Query: 317  QAMKEEEVAKMLQDIGDMWXXXXXXXXXXXXDQREEVRNHALLSLQNCLT-GSVGIHLPH 375
             +  EE   + +  +  ++             +REE+RN A+ SL+   T G   +    
Sbjct: 1169 SSSMEENNLRGVNFVHHLFLKLSEAFRKTTLARREEIRNRAVTSLEKSFTMGHEDLGFTP 1228

Query: 376  DLWLQCFDQVIFTVLDDLLEISQTLS-----PKDYRNMEGTXXXXXXXXXXXXXXXXXXX 430
               + C D VIF  +DDL E     S      ++ R+MEGT                   
Sbjct: 1229 SGCIYCIDHVIFPTIDDLHEKLLDYSRRENAEREMRSMEGTLKIAMKVLMNVFLVYLEQI 1288

Query: 431  SQLPDFSKLWLSVLNRLEIYMKVKFRGRRSEKLQELVPELLKNTLLVMKAGSVLARSSSE 490
             +  +F   WL VL R++  MK         KLQE+VPELL   +  MK   +L +   E
Sbjct: 1289 VESAEFRTFWLGVLRRMDTCMKADLGEYGDNKLQEVVPELLTTMIGTMKEKEILVQ--KE 1346

Query: 491  GNSFWELTWLHINNIAPSLQSEVFPEQD 518
             +  WE+T++ I  IAP+L+ E+FP+++
Sbjct: 1347 DDDLWEITYIQIQWIAPALKDELFPDEE 1374