Miyakogusa Predicted Gene
- Lj0g3v0305289.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0305289.1 tr|D9U541|D9U541_LEULE Cellulose synthase
OS=Leucaena leucocephala GN=CesA PE=2 SV=2,85.85,0,seg,NULL; CELLULOSE
SYNTHASE-RELATED,NULL; X-BOX TRANSCRIPTION FACTOR-RELATED,NULL;
RING/U-box,NULL;,CUFF.20584.1
(206 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G05170.1 | Symbols: CESA3, IXR1, ATCESA3, ATH-B, CEV1 | Cellu... 283 7e-77
AT4G32410.1 | Symbols: CESA1, RSW1, AtCESA1 | cellulose synthase... 132 2e-31
AT2G21770.1 | Symbols: CESA9, CESA09 | cellulose synthase A9 | c... 122 2e-28
AT5G09870.1 | Symbols: CESA5 | cellulose synthase 5 | chr5:30733... 119 1e-27
AT5G17420.1 | Symbols: IRX3, CESA7, ATCESA7, MUR10 | Cellulose s... 119 2e-27
AT4G39350.1 | Symbols: CESA2, ATH-A, ATCESA2 | cellulose synthas... 119 2e-27
AT5G64740.1 | Symbols: CESA6, IXR2, E112, PRC1 | cellulose synth... 117 6e-27
AT2G25540.1 | Symbols: CESA10 | cellulose synthase 10 | chr2:108... 111 3e-25
AT5G44030.1 | Symbols: CESA4, IRX5, NWS2 | cellulose synthase A4... 96 1e-20
AT4G18780.1 | Symbols: CESA8, IRX1, ATCESA8, LEW2 | cellulose sy... 58 5e-09
>AT5G05170.1 | Symbols: CESA3, IXR1, ATCESA3, ATH-B, CEV1 |
Cellulose synthase family protein | chr5:1530401-1535090
REVERSE LENGTH=1065
Length = 1065
Score = 283 bits (723), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 142/206 (68%), Positives = 155/206 (75%), Gaps = 9/206 (4%)
Query: 1 MESEGEAGAKPITTSGAQVCQICSDNVGKTVDGEAFIACDVCAFPVCRPCYEYERKDGNQ 60
MESEGE KP+ Q CQICSDNVGKTVDG+ F+ACD+C+FPVCRPCYEYERKDGNQ
Sbjct: 1 MESEGETAGKPMKNIVPQTCQICSDNVGKTVDGDRFVACDICSFPVCRPCYEYERKDGNQ 60
Query: 61 SCPQCKTRYKRHKGSPAILXXXXXXXXXXXXXXXFNYDSEHQNQKQKISERMLGWQLTYG 120
SCPQCKTRYKR KGSPAI FNY QK+KISERMLGW LT G
Sbjct: 61 SCPQCKTRYKRLKGSPAIPGDKDEDGLADEGTVEFNYP-----QKEKISERMLGWHLTRG 115
Query: 121 RSEEVGAPNYDKEVSHNHIPRLTSGQEVSGEFSAGSPERLSMASPTAGGGKRVHNLPYSS 180
+ EE+G P YDKEVSHNH+PRLTS Q+ SGEFSA SPERLS++S T GGKR LPYSS
Sbjct: 116 KGEEMGEPQYDKEVSHNHLPRLTSRQDTSGEFSAASPERLSVSS-TIAGGKR---LPYSS 171
Query: 181 DVNQSPNIRVGDSGGLGNVAWKERVD 206
DVNQSPN R+ D GLGNVAWKERVD
Sbjct: 172 DVNQSPNRRIVDPVGLGNVAWKERVD 197
>AT4G32410.1 | Symbols: CESA1, RSW1, AtCESA1 | cellulose synthase 1
| chr4:15641009-15646388 REVERSE LENGTH=1081
Length = 1081
Score = 132 bits (331), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/218 (37%), Positives = 104/218 (47%), Gaps = 34/218 (15%)
Query: 1 MESEGEAGAKPITTSGAQVCQICSDNVGKTVDGEAFIACDVCAFPVCRPCYEYERKDGNQ 60
+ E + G KP+ Q+CQIC D+VG G+ F+AC+ CAFPVCRPCYEYERKDG Q
Sbjct: 20 IRHESDGGTKPLKNMNGQICQICGDDVGLAETGDVFVACNECAFPVCRPCYEYERKDGTQ 79
Query: 61 SCPQCKTRYKRHKGSPAILXXXXXXXXXXXXXXXFNY-----DSEHQNQKQKISERMLGW 115
CPQCKTR++RH+GSP + FNY + HQ ++ S
Sbjct: 80 CCPQCKTRFRRHRGSPRV-EGDEDEDDVDDIENEFNYAQGANKARHQRHGEEFSSS---- 134
Query: 116 QLTYGRSEEVGAPNYDKEVSHNHIPRLTSGQEVSGEFSAGSPERLSMAS-PTAGGGKRVH 174
R E IP LT G VSGE + + S P +
Sbjct: 135 ----SRHES------------QPIPLLTHGHTVSGEIRTPDTQSVRTTSGPLGPSDRNAI 178
Query: 175 NLPYSSDVNQSPNIRVGD------SGGLGNVAWKERVD 206
+ PY D Q +R+ D S GLGNV WKERV+
Sbjct: 179 SSPY-IDPRQPVPVRIVDPSKDLNSYGLGNVDWKERVE 215
>AT2G21770.1 | Symbols: CESA9, CESA09 | cellulose synthase A9 |
chr2:9284837-9289495 FORWARD LENGTH=1088
Length = 1088
Score = 122 bits (305), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 102/201 (50%), Gaps = 28/201 (13%)
Query: 18 QVCQICSDNVGKTVDGEAFIACDVCAFPVCRPCYEYERKDGNQSCPQCKTRYKRHKGSPA 77
Q C+IC D + T +GE FIAC+ CAFP CRPCYEYER++GNQ+CPQC TRYKR KGSP
Sbjct: 37 QTCKICRDEIELTDNGEPFIACNECAFPTCRPCYEYERREGNQACPQCGTRYKRIKGSPR 96
Query: 78 ILXXXXXXXXXXXXXXXFNYDSEHQNQKQKISERMLGWQLTYGRSEEVGAPNYDKEVSHN 137
+ + D EH + R L GR + EVSH
Sbjct: 97 VEGDEEDDDIDDLEHEFYGMDPEHVTEAALYYMR-----LNTGRGTD--------EVSHL 143
Query: 138 H-------IPRLTSGQEVSGEFSAGSPERLSMASPTAGGGKRVHNLPYS---SDVNQSPN 187
+ +P LT E S +S + P+ G G RVH++P++ + ++ P
Sbjct: 144 YSASPGSEVPLLTYCDEDSDMYSD---RHALIVPPSTGLGNRVHHVPFTDSFASIHTRPM 200
Query: 188 IRVGDSG--GLGNVAWKERVD 206
+ D G G+VAWK+R++
Sbjct: 201 VPQKDLTVYGYGSVAWKDRME 221
>AT5G09870.1 | Symbols: CESA5 | cellulose synthase 5 |
chr5:3073356-3077974 FORWARD LENGTH=1069
Length = 1069
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 103/210 (49%), Gaps = 23/210 (10%)
Query: 1 MESEGEAGAKPITTSGAQVCQICSDNVGKTVDGEAFIACDVCAFPVCRPCYEYERKDGNQ 60
+ ++ A + + Q CQIC D + +VDGE+F+AC+ CAFPVCRPCYEYER++GNQ
Sbjct: 20 INADESARIRSVEELSGQTCQICGDEIELSVDGESFVACNECAFPVCRPCYEYERREGNQ 79
Query: 61 SCPQCKTRYKRHKGSPAILXXXXXXXXXXXXXXXFNYDSEHQNQKQKISERMLGWQLTYG 120
SCPQCKTRYKR KGSP + F +D + + R
Sbjct: 80 SCPQCKTRYKRIKGSPRV---EGDEEDDGIDDLDFEFDYSRSGLESETFSR--------- 127
Query: 121 RSEEVGAPNYDKEVSHNHIPRLTSGQEVSGEFSAGSPERLSMASPTAGGGKRVHNLPYSS 180
R+ E + + IP LT G+E + S + SP+ G RVH P+
Sbjct: 128 RNSEF---DLASAPPGSQIPLLTYGEE---DVEISSDSHALIVSPSPGHIHRVHQ-PHFP 180
Query: 181 DVNQSPNIRVGDSG----GLGNVAWKERVD 206
D P V G G+VAWK+R++
Sbjct: 181 DPAAHPRPMVPQKDLAVYGYGSVAWKDRME 210
>AT5G17420.1 | Symbols: IRX3, CESA7, ATCESA7, MUR10 | Cellulose
synthase family protein | chr5:5736859-5741407 REVERSE
LENGTH=1026
Length = 1026
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 103/198 (52%), Gaps = 31/198 (15%)
Query: 10 KPITTSGAQVCQICSDNVGKTVDGEAFIACDVCAFPVCRPCYEYERKDGNQSCPQCKTRY 69
KP+ Q C+IC D +G TV+G+ F+AC+ C FP CRPCYEYER++G Q+CPQCKTRY
Sbjct: 27 KPLKNLDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRY 86
Query: 70 KRHKGSPAILXXXXXXXXXXXXXXXFNYDSEHQNQKQKIS-ERMLGWQLTYGRSEEVGAP 128
KR +GSP + + ++ EH+ K K S E ML +++YGR E
Sbjct: 87 KRLRGSPRV---EGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAMLYGKMSYGRGPE---- 139
Query: 129 NYDKEVSHNHIPRLTSGQEVSGEFSAGSPERLSMASPTAGGGKRVHNLPYSSDVNQSPNI 188
D E + P + +G SGEF P + G KRVH PY P+
Sbjct: 140 --DDE--NGRFPPVIAGGH-SGEF----PVGGGYGNGEHGLHKRVH--PY-------PSS 181
Query: 189 RVGDSGGLGNVAWKERVD 206
G GG W+ER+D
Sbjct: 182 EAGSEGG-----WRERMD 194
>AT4G39350.1 | Symbols: CESA2, ATH-A, ATCESA2 | cellulose synthase
A2 | chr4:18297078-18301890 FORWARD LENGTH=1084
Length = 1084
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 106/214 (49%), Gaps = 24/214 (11%)
Query: 1 MESEGEAGAKPITTSGAQVCQICSDNVGKTVDGEAFIACDVCAFPVCRPCYEYERKDGNQ 60
+ ++ A + + Q CQIC D + TV E F+AC+ CAFPVCRPCYEYER++GNQ
Sbjct: 20 INADESARIRSVQELSGQTCQICGDEIELTVSSELFVACNECAFPVCRPCYEYERREGNQ 79
Query: 61 SCPQCKTRYKRHKGSPAILXXXXXXXXXXXXXXXFNY--DSEHQNQKQKISERMLGWQLT 118
+CPQCKTRYKR KGSP + F++ D EH +E L +L
Sbjct: 80 ACPQCKTRYKRIKGSPRVDGDDEEEEDIDDLEYEFDHGMDPEHA------AEAALSSRLN 133
Query: 119 YGRSEEVGAPNYDKEVSHNHIPRLTSGQEVSGEFSAGSPERLSMASPTAGGGKRVHNLPY 178
GR AP + IP LT E + +S + P+ G G RV+ P+
Sbjct: 134 TGRGGLDSAP------PGSQIPLLTYCDEDADMYSD---RHALIVPPSTGYGNRVYPAPF 184
Query: 179 SSDVNQSPNIRVG------DSGGLGNVAWKERVD 206
+D + P R G G+VAWK+R++
Sbjct: 185 -TDSSAPPQARSMVPQKDIAEYGYGSVAWKDRME 217
>AT5G64740.1 | Symbols: CESA6, IXR2, E112, PRC1 | cellulose synthase
6 | chr5:25881555-25886333 FORWARD LENGTH=1084
Length = 1084
Score = 117 bits (293), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 109/217 (50%), Gaps = 25/217 (11%)
Query: 1 MESEGEAGAKPITTSGAQVCQICSDNVGKTVDGEAFIACDVCAFPVCRPCYEYERKDGNQ 60
+ ++ A + + Q CQIC D + TVDGE F+AC+ CAFPVCRPCYEYER++GNQ
Sbjct: 20 INADENARIRSVQELSGQTCQICRDEIELTVDGEPFVACNECAFPVCRPCYEYERREGNQ 79
Query: 61 SCPQCKTRYKRHKGSPAILXXXXXXXXXXXXXXXFNYDS-----EHQNQKQKISERMLGW 115
+CPQCKTR+KR KGSP + F Y + + ++ IS R G
Sbjct: 80 ACPQCKTRFKRLKGSPRV-EGDEEEDDIDDLDNEFEYGNNGIGFDQVSEGMSISRRNSG- 137
Query: 116 QLTYGRSEEVGAPNYDKEVSHNHIPRLTSGQEVSGEFSAGSPERLSMASPTAGG-GKRVH 174
+ +S+ AP + IP LT G E + S + P+ GG G RVH
Sbjct: 138 ---FPQSDLDSAP------PGSQIPLLTYGDE---DVEISSDRHALIVPPSLGGHGNRVH 185
Query: 175 NLPYSSDVNQS---PNIRVGDSG--GLGNVAWKERVD 206
+ S + P + D G G+VAWK+R++
Sbjct: 186 PVSLSDPTVAAHPRPMVPQKDLAVYGYGSVAWKDRME 222
>AT2G25540.1 | Symbols: CESA10 | cellulose synthase 10 |
chr2:10867070-10872077 REVERSE LENGTH=1065
Length = 1065
Score = 111 bits (278), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 102/211 (48%), Gaps = 35/211 (16%)
Query: 4 EGEAGAKPITTSGAQVCQICSDNVGKTVDGEAFIACDVCAFPVCRPCYEYERKDGNQSCP 63
+ + G KP+ Q+CQIC D+VG T G F+AC+ C FP+C+ CYEYERKDG+Q CP
Sbjct: 17 DSDDGLKPLKDLNGQICQICGDDVGLTKTGNVFVACNECGFPLCQSCYEYERKDGSQCCP 76
Query: 64 QCKTRYKRHKGSPAILXXXXXXXXXXXXXXXFNYDSEHQNQKQKISERMLGWQLTYGRSE 123
QCK R++RH GSP + +D N K ++ R+E
Sbjct: 77 QCKARFRRHNGSPRVEVDEKEDDVNDIEN---EFDYTQGNNKARLPH----------RAE 123
Query: 124 EVGAPNYDKEVSHNHIPRLTSGQEVSGEFSAGSPERLSMASPTAG----GGKRVHNLPY- 178
E + + +E + LT G VSGE +P+R + SP G ++ LP
Sbjct: 124 EFSSSSRHEE--SLPVSLLTHGHPVSGEIP--TPDRNATLSPCIDPQLPGIYQLLLLPVR 179
Query: 179 ----SSDVNQSPNIRVGDSGGLGNVAWKERV 205
S D+N S GL NV WK+R+
Sbjct: 180 ILDPSKDLN---------SYGLVNVDWKKRI 201
>AT5G44030.1 | Symbols: CESA4, IRX5, NWS2 | cellulose synthase A4
| chr5:17714713-17719564 FORWARD LENGTH=1049
Length = 1049
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 50/66 (75%)
Query: 13 TTSGAQVCQICSDNVGKTVDGEAFIACDVCAFPVCRPCYEYERKDGNQSCPQCKTRYKRH 72
++ A++C++C D V +G+ F+AC VC +PVC+PCYEYER +GN+ CPQC T YKRH
Sbjct: 16 SSFSAKICKVCGDEVKDDDNGQTFVACHVCVYPVCKPCYEYERSNGNKCCPQCNTLYKRH 75
Query: 73 KGSPAI 78
KGSP I
Sbjct: 76 KGSPKI 81
>AT4G18780.1 | Symbols: CESA8, IRX1, ATCESA8, LEW2 | cellulose
synthase family protein | chr4:10312846-10316719
REVERSE LENGTH=985
Length = 985
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 15 SGAQVCQICSDNVGKTVDGEAFIACDVCAFPVCRPCYEYERKDGNQSCPQCKTRY 69
S + +C C + +G +GE F+AC C+FP+C+ C EYE K+G + C +C Y
Sbjct: 4 SRSPICNTCGEEIGVKSNGEFFVACHECSFPICKACLEYEFKEGRRICLRCGNPY 58