Miyakogusa Predicted Gene
- Lj0g3v0304909.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0304909.1 Non Chatacterized Hit- tr|F6H8E7|F6H8E7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,26.12,2e-18,PPR_2,Pentatricopeptide repeat; PPR,Pentatricopeptide
repeat; PPR: pentatricopeptide repeat domain,P,CUFF.20513.1
(528 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 523 e-149
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 301 5e-82
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 300 1e-81
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 299 3e-81
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 294 1e-79
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 292 5e-79
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 5e-79
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 290 2e-78
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 285 6e-77
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 7e-77
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 1e-76
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 282 5e-76
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 278 8e-75
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 278 8e-75
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 9e-75
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 3e-74
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 4e-74
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 275 6e-74
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 274 1e-73
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 1e-73
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 273 3e-73
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 272 3e-73
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 271 6e-73
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 7e-73
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 270 2e-72
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 5e-72
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 1e-71
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 267 1e-71
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 2e-71
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 5e-71
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 7e-71
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 1e-70
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 2e-70
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 263 3e-70
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 3e-70
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 261 6e-70
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 261 6e-70
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 1e-69
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 260 1e-69
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 260 1e-69
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 3e-69
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 3e-69
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 9e-69
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 257 2e-68
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 256 2e-68
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 2e-68
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 3e-68
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 3e-68
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 3e-68
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 4e-68
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 7e-68
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 7e-68
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 254 7e-68
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 9e-68
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 3e-67
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 3e-67
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 3e-67
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 252 4e-67
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 252 4e-67
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 252 5e-67
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 7e-67
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 251 8e-67
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 1e-66
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 1e-66
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 250 1e-66
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 1e-66
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 249 3e-66
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 5e-66
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 5e-66
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 5e-66
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 5e-66
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 7e-66
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 9e-66
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 1e-65
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 1e-65
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 248 1e-65
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 2e-65
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 2e-65
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 3e-65
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 246 3e-65
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 246 4e-65
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 4e-65
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 7e-65
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 7e-65
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 8e-65
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 9e-65
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 2e-64
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 243 3e-64
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 242 4e-64
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 4e-64
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 5e-64
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 5e-64
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 241 8e-64
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 241 1e-63
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 1e-63
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 240 2e-63
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 239 5e-63
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 8e-63
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 8e-63
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 1e-62
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 1e-62
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 4e-62
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 4e-62
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 236 4e-62
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 4e-62
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 5e-62
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 235 6e-62
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 7e-62
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 7e-62
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 235 7e-62
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 1e-61
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 1e-61
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 1e-61
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 234 2e-61
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 233 2e-61
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 2e-61
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 3e-61
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 5e-61
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 232 6e-61
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 7e-61
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 7e-61
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 9e-61
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 230 2e-60
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 229 4e-60
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 1e-59
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 3e-59
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 3e-59
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 4e-59
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 225 6e-59
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 9e-59
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 5e-58
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 5e-58
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 222 5e-58
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 221 9e-58
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 9e-58
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 1e-57
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 2e-57
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 220 2e-57
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 3e-57
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 6e-57
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 218 8e-57
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 1e-56
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 1e-56
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 2e-56
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 2e-56
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 2e-56
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 2e-56
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 216 3e-56
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 7e-56
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 214 1e-55
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 4e-55
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 212 5e-55
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 211 8e-55
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 211 9e-55
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 2e-54
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 210 2e-54
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 2e-54
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 209 4e-54
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 7e-54
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 8e-54
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 3e-53
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 1e-52
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 2e-52
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 2e-52
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 5e-52
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 5e-52
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 7e-52
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 201 8e-52
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 199 3e-51
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 6e-51
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 197 2e-50
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 3e-50
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 194 1e-49
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 1e-49
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 194 1e-49
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 194 2e-49
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 1e-48
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 1e-48
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 7e-48
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 186 4e-47
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 7e-46
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 4e-45
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 3e-44
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 1e-42
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 4e-42
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 168 9e-42
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 3e-41
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 3e-41
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 3e-40
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 4e-38
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 4e-35
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 3e-32
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 2e-31
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 5e-27
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 1e-26
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 3e-25
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 7e-25
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 7e-24
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 108 1e-23
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 5e-23
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 1e-22
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 1e-22
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 1e-22
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 103 4e-22
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 9e-22
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 9e-22
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 2e-20
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 96 8e-20
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 1e-19
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 94 3e-19
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 4e-19
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 8e-19
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 9e-19
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 5e-18
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 1e-17
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 1e-17
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 88 1e-17
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 88 2e-17
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 88 2e-17
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 2e-17
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 6e-17
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 7e-17
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 8e-17
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 1e-16
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 85 1e-16
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 85 1e-16
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 2e-16
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 7e-16
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 7e-16
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 82 9e-16
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 82 1e-15
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 81 2e-15
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 80 3e-15
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 4e-15
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 79 1e-14
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 1e-14
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 78 1e-14
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 78 2e-14
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 2e-14
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 4e-14
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 1e-13
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 75 2e-13
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 74 2e-13
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 73 4e-13
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 70 3e-12
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 6e-12
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 69 6e-12
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 69 6e-12
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 69 8e-12
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 9e-12
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 67 4e-11
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 63 5e-10
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 62 1e-09
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 61 2e-09
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 61 2e-09
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 1e-07
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 52 1e-06
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 52 1e-06
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 1e-06
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 50 3e-06
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 50 4e-06
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 523 bits (1348), Expect = e-149, Method: Compositional matrix adjust.
Identities = 268/500 (53%), Positives = 336/500 (67%), Gaps = 33/500 (6%)
Query: 48 CLTNQFFRPFS---SQKLPPRRANKELAN----------ALRILNLVSPKKSASDIENRR 94
CL N + R F S+ R N+E+AN +LR+L+++S K + NR+
Sbjct: 3 CLRNYYCRAFGYKQSRSCYSRSLNREIANESSEVERRARSLRVLDIISSKSGG--VSNRQ 60
Query: 95 SHLRLI-----------------EDMLENSVINHVGSNLATLKTTTEMSSVMEQELGVDV 137
H + ED + N V S L + SSV D
Sbjct: 61 DHFGFVQEFRQTDSWRFRGQAISEDFDLSRTKNGVSSVLEEVMLEDSSSSVKRDGWSFDA 120
Query: 138 CFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEE 197
LS AV SCG RD G +HCLA+ GFI++VY+GSSL+ LY +AY+VFEE
Sbjct: 121 YGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEE 180
Query: 198 MPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYG 257
MPERNVVSWTA+I+GFAQEWRVD+CL+L+ MR S PN +T+T+LLSAC GSGALG G
Sbjct: 181 MPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQG 240
Query: 258 RGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQH 317
R HCQ + MG SYLH+ N+LI+MY KCG + DA IF+ +DVV+WNSMIAGYAQH
Sbjct: 241 RSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQH 300
Query: 318 GLAQEAISLFEEMI-KQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDH 376
GLA +AI LFE M+ K G PDA+TYL +LSSCRH GLVKEG+ +FN M EHG++P+L+H
Sbjct: 301 GLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNH 360
Query: 377 YSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLE 436
YSC+VDLLGR GL++EA + IENMP+ PN+VIWGSLL S R+HG+VW GI AAE RL+LE
Sbjct: 361 YSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLE 420
Query: 437 PGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSN 496
P C+AT QLANLYASVG+W + A VRKLMKDKGLK NPG SWIE+ + V F+A+D SN
Sbjct: 421 PDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNYVFMFKAEDGSN 480
Query: 497 RRMSDILLVIDSLVDHMSSL 516
RM +I+ V+ L+DHM L
Sbjct: 481 CRMLEIVHVLHCLIDHMEFL 500
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 301 bits (772), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 155/369 (42%), Positives = 226/369 (61%), Gaps = 3/369 (0%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIA-NVYVGSSLISLYSRCALSGDAYRVFEEMPERN 202
+ + G D+ G H L + TG + +V++GSSL+ +Y +C+ DA +VF+EMP RN
Sbjct: 211 LKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRN 270
Query: 203 VVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHC 262
VV+WTA+IAG+ Q D + +F M S++ PN T +S+LSAC GAL GR HC
Sbjct: 271 VVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHC 330
Query: 263 QIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQE 322
+I+ LI +Y KCG +++A+ +FE + ++V TW +MI G+A HG A++
Sbjct: 331 YMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARD 390
Query: 323 AISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMV-EHGVQPKLDHYSCIV 381
A LF M+ V P+ VT++++LS+C HGGLV+EG+ F SM ++PK DHY+C+V
Sbjct: 391 AFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMV 450
Query: 382 DLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSA 441
DL GR GL+ EA+ IE MP+ P V+WG+L S LH + +G AA + L+P S
Sbjct: 451 DLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSG 510
Query: 442 TLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEA-QDKSNRRMS 500
LANLY+ W++VARVRK MKD+ + +PG SWIEVK K+ F A DK
Sbjct: 511 RYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESD 570
Query: 501 DILLVIDSL 509
D+ +D++
Sbjct: 571 DLYKTLDTV 579
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 127/270 (47%), Gaps = 22/270 (8%)
Query: 158 QYHCLAITTGFIANVYVGSSLI--SLYSRCALSGD----AYRVFEEMPERNVVSWTAIIA 211
Q HCL +T+ Y L L RC + A R+ ++ ++ W ++I
Sbjct: 19 QIHCLLLTSPIF---YTRRDLFLSRLLRRCCTAATQFRYARRLLCQLQTLSIQLWDSLIG 75
Query: 212 GFAQEWRVDMCLEL--FHLMRGSEMKPNYFTYTSLLSACM---GSGALGYGRGAHCQIIQ 266
F+ ++ L + MR + + P+ T+ LL A S + H I++
Sbjct: 76 HFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPFQF----HAHIVK 131
Query: 267 MGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISL 326
G S V N+LI+ YS G+ D A +F+ +DVVTW +MI G+ ++G A EA+
Sbjct: 132 FGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVY 191
Query: 327 FEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHY--SCIVDLL 384
F EM K GV + +T +S+L + V+ G+ +E G + K D + S +VD+
Sbjct: 192 FVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETG-RVKCDVFIGSSLVDMY 250
Query: 385 GRAGLIREARDFIENMPVCPNAVIWGSLLS 414
G+ +A+ + MP N V W +L++
Sbjct: 251 GKCSCYDDAQKVFDEMP-SRNVVTWTALIA 279
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 94/197 (47%), Gaps = 8/197 (4%)
Query: 128 VMEQELGVDVC----FLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYS 183
V E+ L DV LS +S+C L+ G + HC I N G++LI LY
Sbjct: 293 VFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYV 352
Query: 184 RCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTS 243
+C +A VFE + E+NV +WTA+I GFA +LF+ M S + PN T+ +
Sbjct: 353 KCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMA 412
Query: 244 LLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDN--ALIAMYSKCGVIDDALYIFENMVG 301
+LSAC G + GR ++ F+ D+ ++ ++ + G++++A + E M
Sbjct: 413 VLSACAHGGLVEEGRRLFLS-MKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPM 471
Query: 302 RDV-VTWNSMIAGYAQH 317
V W ++ H
Sbjct: 472 EPTNVVWGALFGSCLLH 488
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 300 bits (769), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 151/380 (39%), Positives = 229/380 (60%), Gaps = 1/380 (0%)
Query: 131 QELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGD 190
Q L +D + +CG +N G Q H I T F ++YVGS+LI +Y +C
Sbjct: 264 QGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHY 323
Query: 191 AYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMG 250
A VF+ M ++NVVSWTA++ G+ Q R + +++F M+ S + P+++T +SAC
Sbjct: 324 AKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACAN 383
Query: 251 SGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSM 310
+L G H + I G Y+ V N+L+ +Y KCG IDD+ +F M RD V+W +M
Sbjct: 384 VSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAM 443
Query: 311 IAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMV-EHG 369
++ YAQ G A E I LF++M++ G+ PD VT ++S+C GLV++GQ YF M E+G
Sbjct: 444 VSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYG 503
Query: 370 VQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAA 429
+ P + HYSC++DL R+G + EA FI MP P+A+ W +LLS+ R GN+ IG AA
Sbjct: 504 IVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAA 563
Query: 430 ESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRF 489
ES + L+P A L+++YAS G W+ VA++R+ M++K +K PG SWI+ K K+H F
Sbjct: 564 ESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSF 623
Query: 490 EAQDKSNRRMSDILLVIDSL 509
A D+S+ + I ++ L
Sbjct: 624 SADDESSPYLDQIYAKLEEL 643
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/370 (28%), Positives = 175/370 (47%), Gaps = 37/370 (10%)
Query: 156 GVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVV----------- 204
G Q H I GF + + VGS L+ +Y+ DA +VF + +RN V
Sbjct: 158 GKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLA 217
Query: 205 -------------------SWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLL 245
SW A+I G AQ +E F M+ +K + + + S+L
Sbjct: 218 CGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVL 277
Query: 246 SACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVV 305
AC G GA+ G+ H II+ F +++V +ALI MY KC + A +F+ M ++VV
Sbjct: 278 PACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVV 337
Query: 306 TWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSM 365
+W +M+ GY Q G A+EA+ +F +M + G+DPD T +S+C + ++EG +
Sbjct: 338 SWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKA 397
Query: 366 VEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIG 425
+ G+ + + +V L G+ G I ++ M V +AV W +++S+ G
Sbjct: 398 ITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNV-RDAVSWTAMVSAYAQFGRAVET 456
Query: 426 IEAAESRLL--LEPGCSATLQQLANLYASVGWWNQVARVRKLMKDK-GLKPNPG--SSWI 480
I+ + + L+P TL + + + G + R KLM + G+ P+ G S I
Sbjct: 457 IQLFDKMVQHGLKPD-GVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMI 515
Query: 481 EVKSKVHRFE 490
++ S+ R E
Sbjct: 516 DLFSRSGRLE 525
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 132/275 (48%), Gaps = 34/275 (12%)
Query: 171 NVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFH-LM 229
N++ ++L+ YS+ L + FE++P+R+ V+W +I G++ V ++ ++ +M
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130
Query: 230 RGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSK---- 285
R T ++L +G + G+ H Q+I++GF SYL V + L+ MY+
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCI 190
Query: 286 ---------------------------CGVIDDALYIFENMVGRDVVTWNSMIAGYAQHG 318
CG+I+DAL +F M +D V+W +MI G AQ+G
Sbjct: 191 SDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAMIKGLAQNG 249
Query: 319 LAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYS 378
LA+EAI F EM QG+ D + S+L +C G + EG+ ++ Q + S
Sbjct: 250 LAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGS 309
Query: 379 CIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLL 413
++D+ + + A+ + M N V W +++
Sbjct: 310 ALIDMYCKCKCLHYAKTVFDRMKQ-KNVVSWTAMV 343
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 299 bits (766), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 151/363 (41%), Positives = 218/363 (60%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP 199
LS + + ++R G Q H + GF +NV+VGS+L+ LY+R L DA VF+ +
Sbjct: 164 LSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALE 223
Query: 200 ERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRG 259
RN VSW A+IAG A+ + LELF M +P++F+Y SL AC +G L G+
Sbjct: 224 SRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKW 283
Query: 260 AHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGL 319
H +I+ G N L+ MY+K G I DA IF+ + RDVV+WNS++ YAQHG
Sbjct: 284 VHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGF 343
Query: 320 AQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSC 379
+EA+ FEEM + G+ P+ +++LS+L++C H GL+ EG Y+ M + G+ P+ HY
Sbjct: 344 GKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVT 403
Query: 380 IVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGC 439
+VDLLGRAG + A FIE MP+ P A IW +LL++ R+H N +G AAE L+P
Sbjct: 404 VVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDD 463
Query: 440 SATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRM 499
L N+YAS G WN ARVRK MK+ G+K P SW+E+++ +H F A D+ + +
Sbjct: 464 PGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQR 523
Query: 500 SDI 502
+I
Sbjct: 524 EEI 526
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 159/288 (55%), Gaps = 1/288 (0%)
Query: 133 LGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAY 192
+ D F + + C + L G H + + F ++ +G++L+++Y++C +A
Sbjct: 56 IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEAR 115
Query: 193 RVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSG 252
+VFE+MP+R+ V+WT +I+G++Q R L F+ M PN FT +S++ A
Sbjct: 116 KVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAER 175
Query: 253 ALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIA 312
G H ++ GF S +HV +AL+ +Y++ G++DDA +F+ + R+ V+WN++IA
Sbjct: 176 RGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIA 235
Query: 313 GYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQP 372
G+A+ ++A+ LF+ M++ G P +Y SL +C G +++G+ M++ G +
Sbjct: 236 GHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKL 295
Query: 373 KLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHG 420
+ ++D+ ++G I +AR + + + V W SLL++ HG
Sbjct: 296 VAFAGNTLLDMYAKSGSIHDARKIFDRL-AKRDVVSWNSLLTAYAQHG 342
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 98/197 (49%), Gaps = 23/197 (11%)
Query: 229 MRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGV 288
+ GS + + Y +LL C L GR H I+Q F + + N L+ MY+KCG
Sbjct: 51 LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110
Query: 289 IDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSS 348
+++A +FE M RD VTW ++I+GY+QH +A+ F +M++ G P+ T S++ +
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170
Query: 349 CR-----------HGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFI 397
HG VK G F+S V G S ++DL R GL+ +A+
Sbjct: 171 AAAERRGCCGHQLHGFCVKCG---FDSNVHVG--------SALLDLYTRYGLMDDAQLVF 219
Query: 398 ENMPVCPNAVIWGSLLS 414
+ + N V W +L++
Sbjct: 220 DALE-SRNDVSWNALIA 235
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 294 bits (752), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 146/352 (41%), Positives = 217/352 (61%), Gaps = 7/352 (1%)
Query: 169 IANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHL 228
I NV +S+IS Y+ A + A +F +M ERNVVSW A+IAG+ Q + L LF L
Sbjct: 317 IRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCL 376
Query: 229 MRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGF------HSYLHVDNALIAM 282
++ + P ++++ ++L AC L G AH +++ GF + V N+LI M
Sbjct: 377 LKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDM 436
Query: 283 YSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTY 342
Y KCG +++ +F M+ RD V+WN+MI G+AQ+G EA+ LF EM++ G PD +T
Sbjct: 437 YVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITM 496
Query: 343 LSLLSSCRHGGLVKEGQVYFNSMV-EHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMP 401
+ +LS+C H G V+EG+ YF+SM + GV P DHY+C+VDLLGRAG + EA+ IE MP
Sbjct: 497 IGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMP 556
Query: 402 VCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVAR 461
+ P++VIWGSLL++ ++H N+ +G AE L +EP S L+N+YA +G W V
Sbjct: 557 MQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMN 616
Query: 462 VRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSLVDHM 513
VRK M+ +G+ PG SWI+++ H F +DKS+ R I ++D L+ M
Sbjct: 617 VRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEM 668
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 153/291 (52%), Gaps = 34/291 (11%)
Query: 157 VQY-HCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAII----- 210
V+Y H I +GF +++ + LI YS+C D +VF++MP+RN+ +W +++
Sbjct: 39 VRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTK 98
Query: 211 --------------------------AGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSL 244
+GFAQ R + L F +M N +++ S+
Sbjct: 99 LGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASV 158
Query: 245 LSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDV 304
LSAC G + G H I + F S +++ +AL+ MYSKCG ++DA +F+ M R+V
Sbjct: 159 LSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNV 218
Query: 305 VTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNS 364
V+WNS+I + Q+G A EA+ +F+ M++ V+PD VT S++S+C +K GQ
Sbjct: 219 VSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGR 278
Query: 365 MVEHG-VQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLS 414
+V++ ++ + + VD+ + I+EAR ++MP+ N + S++S
Sbjct: 279 VVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPI-RNVIAETSMIS 328
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 103/219 (47%), Gaps = 43/219 (19%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFI------ANVYVGSSLISLYSRCALSGDAYR 193
++ + +C +L+ G+Q H + GF +++VG+SLI +Y +C + Y
Sbjct: 389 FANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYL 448
Query: 194 VFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGA 253
VF +M ER+ VSW A+I GFAQ + LELF M S KP++ T +LSAC
Sbjct: 449 VFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSAC----- 503
Query: 254 LGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGV--IDDALYIFENMVGRDVVTWNSMI 311
H ++ G H + +M GV + D +++GR
Sbjct: 504 ------GHAGFVEEGRHYF-------SSMTRDFGVAPLRDHYTCMVDLLGR--------- 541
Query: 312 AGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCR 350
G +EA S+ EEM Q PD+V + SLL++C+
Sbjct: 542 -----AGFLEEAKSMIEEMPMQ---PDSVIWGSLLAACK 572
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 102/232 (43%), Gaps = 36/232 (15%)
Query: 241 YTSLLSACMGSGALG-YGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM 299
+ LL +C+ S Y R H +I+ GF + + + N LI YSKCG ++D +F+ M
Sbjct: 22 FAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKM 81
Query: 300 VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQ 359
R++ TWNS++ G + G EA SLF M ++ D T+ S++S +E
Sbjct: 82 PQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPER----DQCTWNSMVSGFAQHDRCEEAL 137
Query: 360 VYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLH 419
YF M + G L+ YS L +GL D + + V SL++ S
Sbjct: 138 CYFAMMHKEGFV--LNEYSFASVLSACSGL----NDMNKGVQV-------HSLIAKSPFL 184
Query: 420 GNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGL 471
+V+IG L ++Y+ G N RV M D+ +
Sbjct: 185 SDVYIG------------------SALVDMYSKCGNVNDAQRVFDEMGDRNV 218
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 292 bits (747), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 145/363 (39%), Positives = 226/363 (62%), Gaps = 7/363 (1%)
Query: 171 NVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMR 230
NV +++I+ Y++C +A +F++MP+R+ VSW A+IAG++Q L LF M
Sbjct: 342 NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQME 401
Query: 231 GSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVID 290
+ N +++S LS C AL G+ H ++++ G+ + V NAL+ MY KCG I+
Sbjct: 402 REGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIE 461
Query: 291 DALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCR 350
+A +F+ M G+D+V+WN+MIAGY++HG + A+ FE M ++G+ PD T +++LS+C
Sbjct: 462 EANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACS 521
Query: 351 HGGLVKEGQVYFNSMV-EHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIW 409
H GLV +G+ YF +M ++GV P HY+C+VDLLGRAGL+ +A + ++NMP P+A IW
Sbjct: 522 HTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIW 581
Query: 410 GSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDK 469
G+LL +SR+HGN + AA+ +EP S L+NLYAS G W V ++R M+DK
Sbjct: 582 GTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDK 641
Query: 470 GLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSL------VDHMSSLSLQSHMY 523
G+K PG SWIE+++K H F D+ + +I ++ L ++S S+ H
Sbjct: 642 GVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDV 701
Query: 524 EEE 526
EEE
Sbjct: 702 EEE 704
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 158/313 (50%), Gaps = 21/313 (6%)
Query: 169 IANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHL 228
+ +V +++I+ Y++ +A ++F+E P ++V +WTA+++G+ Q V+ ELF
Sbjct: 247 VRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDK 306
Query: 229 MRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFH----SYLHVDNALIAMYS 284
M + N ++ ++L+ GY +G ++ + F + N +I Y+
Sbjct: 307 M----PERNEVSWNAMLA--------GYVQGERMEMAKELFDVMPCRNVSTWNTMITGYA 354
Query: 285 KCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLS 344
+CG I +A +F+ M RD V+W +MIAGY+Q G + EA+ LF +M ++G + ++ S
Sbjct: 355 QCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSS 414
Query: 345 LLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCP 404
LS+C ++ G+ +V+ G + + ++ + + G I EA D + M
Sbjct: 415 ALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEM-AGK 473
Query: 405 NAVIWGSLLSSSRLHGNVWIGIEAAES--RLLLEPGCSATLQQLANLYASVGWWNQVARV 462
+ V W ++++ HG + + ES R L+P AT+ + + + G ++ +
Sbjct: 474 DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPD-DATMVAVLSACSHTGLVDKGRQY 532
Query: 463 RKLM-KDKGLKPN 474
M +D G+ PN
Sbjct: 533 FYTMTQDYGVMPN 545
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 116/239 (48%), Gaps = 21/239 (8%)
Query: 178 LISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPN 237
+I Y R G A +FE MPER+V SW +++G+AQ VD +F M + N
Sbjct: 132 MIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMP----EKN 187
Query: 238 YFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFE 297
++ +LLSA + + + C + + + L N L+ + K I +A F+
Sbjct: 188 DVSWNALLSAYVQNSKMEEA----CMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFD 243
Query: 298 NMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKE 357
+M RDVV+WN++I GYAQ G EA LF+E Q D T+ +++S +V+E
Sbjct: 244 SMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQ----DVFTWTAMVSGYIQNRMVEE 299
Query: 358 GQVYFNSMVEHGVQPKLDHYSCIVDLLG--RAGLIREARDFIENMPVCPNAVIWGSLLS 414
+ F+ M P+ + S L G + + A++ + MP C N W ++++
Sbjct: 300 ARELFDKM------PERNEVSWNAMLAGYVQGERMEMAKELFDVMP-CRNVSTWNTMIT 351
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 111/223 (49%), Gaps = 5/223 (2%)
Query: 129 MEQELG-VDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCAL 187
ME+E G ++ S A+S+C L G Q H + G+ +VG++L+ +Y +C
Sbjct: 400 MEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGS 459
Query: 188 SGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSA 247
+A +F+EM +++VSW +IAG+++ ++ L F M+ +KP+ T ++LSA
Sbjct: 460 IEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSA 519
Query: 248 CMGSGALGYGRGAHCQIIQ-MGFHSYLHVDNALIAMYSKCGVIDDALYIFENM-VGRDVV 305
C +G + GR + Q G ++ + + G+++DA + +NM D
Sbjct: 520 CSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAA 579
Query: 306 TWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSS 348
W +++ HG + A + +++ ++P+ LLS+
Sbjct: 580 IWGTLLGASRVHGNTELAETAADKIF--AMEPENSGMYVLLSN 620
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 117/242 (48%), Gaps = 29/242 (11%)
Query: 179 ISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNY 238
IS Y R +A RVF+ MP + VS+ +I+G+ + ++ +LF M ++
Sbjct: 71 ISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDL---- 126
Query: 239 FTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFEN 298
++ ++ + + LG R + + S+ N +++ Y++ G +DDA +F+
Sbjct: 127 VSWNVMIKGYVRNRNLGKARELFEIMPERDVCSW----NTMLSGYAQNGCVDDARSVFDR 182
Query: 299 MVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLS-SCRHGGLVK- 356
M ++ V+WN++++ Y Q+ +EA LF+ + +L+S +C GG VK
Sbjct: 183 MPEKNDVSWNALLSAYVQNSKMEEACMLFK----------SRENWALVSWNCLLGGFVKK 232
Query: 357 ----EGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSL 412
E + +F+SM V ++ I+ ++G I EAR + PV + W ++
Sbjct: 233 KKIVEARQFFDSMNVRDVVS----WNTIITGYAQSGKIDEARQLFDESPV-QDVFTWTAM 287
Query: 413 LS 414
+S
Sbjct: 288 VS 289
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 291 bits (746), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 156/385 (40%), Positives = 232/385 (60%), Gaps = 1/385 (0%)
Query: 130 EQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSG 189
+ L D ++ ++C L G+Q H I TG + NV+VGSSLI LYS+C L
Sbjct: 469 DDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPE 528
Query: 190 DAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACM 249
A +VF M N+V+W ++I+ +++ ++ ++LF+LM + P+ + TS+L A
Sbjct: 529 MALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAIS 588
Query: 250 GSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNS 309
+ +L G+ H +++G S H+ NALI MY KCG A IF+ M + ++TWN
Sbjct: 589 STASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNL 648
Query: 310 MIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMV-EH 368
MI GY HG A+SLF+EM K G PD VT+LSL+S+C H G V+EG+ F M ++
Sbjct: 649 MIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDY 708
Query: 369 GVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEA 428
G++P ++HY+ +VDLLGRAGL+ EA FI+ MP+ ++ IW LLS+SR H NV +GI +
Sbjct: 709 GIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILS 768
Query: 429 AESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHR 488
AE L +EP +T QL NLY G N+ A++ LMK+KGL PG SWIEV + +
Sbjct: 769 AEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNV 828
Query: 489 FEAQDKSNRRMSDILLVIDSLVDHM 513
F + S+ ++I V++ L +M
Sbjct: 829 FFSGGSSSPMKAEIFNVLNRLKSNM 853
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 146/277 (52%), Gaps = 3/277 (1%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP 199
+ A+ +C + G Q HC + G + YV +SL+S+YS+C + G+A VF +
Sbjct: 275 FTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVV 334
Query: 200 ERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRG 259
++ + W A++A +A+ L+LF MR + P+ FT ++++S C G YG+
Sbjct: 335 DKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKS 394
Query: 260 AHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGL 319
H ++ + S +++AL+ +YSKCG DA +F++M +D+V W S+I+G ++G
Sbjct: 395 VHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGK 454
Query: 320 AQEAISLFEEMI--KQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHY 377
+EA+ +F +M + PD+ S+ ++C ++ G SM++ G+ +
Sbjct: 455 FKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVG 514
Query: 378 SCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLS 414
S ++DL + GL A +M N V W S++S
Sbjct: 515 SSLIDLYSKCGLPEMALKVFTSMST-ENMVAWNSMIS 550
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 169/339 (49%), Gaps = 5/339 (1%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP 199
LS+ +S C N G H + + S+L++LYS+C DAY VF+ M
Sbjct: 376 LSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSME 435
Query: 200 ERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSE--MKPNYFTYTSLLSACMGSGALGYG 257
E+++V+W ++I+G + + L++F M+ + +KP+ TS+ +AC G AL +G
Sbjct: 436 EKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFG 495
Query: 258 RGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQH 317
H +I+ G + V ++LI +YSKCG+ + AL +F +M ++V WNSMI+ Y+++
Sbjct: 496 LQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRN 555
Query: 318 GLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHY 377
L + +I LF M+ QG+ PD+V+ S+L + + +G+ + G+
Sbjct: 556 NLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLK 615
Query: 378 SCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEA-AESRLLLE 436
+ ++D+ + G + A + + M + + W ++ HG+ + E + E
Sbjct: 616 NALIDMYVKCGFSKYAENIFKKMQH-KSLITWNLMIYGYGSHGDCITALSLFDEMKKAGE 674
Query: 437 PGCSATLQQLANLYASVGWWNQVARVRKLMK-DKGLKPN 474
T L + G+ + + + MK D G++PN
Sbjct: 675 SPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPN 713
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 140/260 (53%), Gaps = 2/260 (0%)
Query: 156 GVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPER-NVVSWTAIIAGFA 214
G Q H + + ++ ++LI +Y + LS DA+RVF E+ ++ NVV W +I GF
Sbjct: 189 GKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFG 248
Query: 215 QEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLH 274
+ L+L+ L + + +K ++T L AC S G+GR HC +++MG H+ +
Sbjct: 249 GSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPY 308
Query: 275 VDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQG 334
V +L++MYSKCG++ +A +F +V + + WN+M+A YA++ A+ LF M ++
Sbjct: 309 VCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKS 368
Query: 335 VDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREAR 394
V PD+ T +++S C GL G+ + + +Q S ++ L + G +A
Sbjct: 369 VLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAY 428
Query: 395 DFIENMPVCPNAVIWGSLLS 414
++M + V WGSL+S
Sbjct: 429 LVFKSMEE-KDMVAWGSLIS 447
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 95/186 (51%), Gaps = 13/186 (6%)
Query: 239 FTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFE- 297
FT+ SLL AC L YG+ H ++ +G+ + +L+ MY KCG +D A+ +F+
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 120
Query: 298 ------NMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSS--C 349
+ RDV WNSMI GY + +E + F M+ GV PDA + LS++ S C
Sbjct: 121 WSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFS-LSIVVSVMC 179
Query: 350 RHGGLVK-EGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREA-RDFIENMPVCPNAV 407
+ G + EG+ M+ + + + ++D+ + GL +A R F+E + N V
Sbjct: 180 KEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVE-IEDKSNVV 238
Query: 408 IWGSLL 413
+W ++
Sbjct: 239 LWNVMI 244
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 119/263 (45%), Gaps = 14/263 (5%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFE------- 196
+ +C + +L+ G H + G+ + ++ +SL+++Y +C A +VF+
Sbjct: 67 LKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQS 126
Query: 197 EMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGY 256
+ R+V W ++I G+ + R + F M ++P+ F+ + ++S G
Sbjct: 127 GVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRR 186
Query: 257 --GRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGR-DVVTWNSMIAG 313
G+ H +++ + + ALI MY K G+ DA +F + + +VV WN MI G
Sbjct: 187 EEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVG 246
Query: 314 YAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPK 373
+ G+ + ++ L+ V + ++ L +C G+ +V+ G+
Sbjct: 247 FGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHN- 305
Query: 374 LDHYSC--IVDLLGRAGLIREAR 394
D Y C ++ + + G++ EA
Sbjct: 306 -DPYVCTSLLSMYSKCGMVGEAE 327
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 114/250 (45%), Gaps = 7/250 (2%)
Query: 128 VMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCAL 187
++ Q + D ++ + + S L G H + G ++ ++ ++LI +Y +C
Sbjct: 568 MLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGF 627
Query: 188 SGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSA 247
S A +F++M +++++W +I G+ L LF M+ + P+ T+ SL+SA
Sbjct: 628 SKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISA 687
Query: 248 CMGSGALGYGRGAHCQIIQ-MGFHSYLHVDNALIAMYSKCGVIDDALYIFENM-VGRDVV 305
C SG + G+ + Q G + ++ + + G++++A + M + D
Sbjct: 688 CNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSS 747
Query: 306 TWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPD-AVTYLSLLSSCRHGGLVKEGQVYFNS 364
W +++ H + I E++++ ++P+ TY+ L++ GL E
Sbjct: 748 IWLCLLSASRTHHNVELGILSAEKLLR--MEPERGSTYVQLINLYMEAGLKNEAAKLLGL 805
Query: 365 MVEHGV--QP 372
M E G+ QP
Sbjct: 806 MKEKGLHKQP 815
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 151/363 (41%), Positives = 219/363 (60%), Gaps = 3/363 (0%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV 203
++SC L G Q H L + + ++++VGSSL+ +Y++ +A +FE +PER+V
Sbjct: 160 LTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDV 219
Query: 204 VSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQ 263
VS TAIIAG+AQ + LE+FH + M PNY TY SLL+A G L +G+ AHC
Sbjct: 220 VSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCH 279
Query: 264 IIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEA 323
+++ Y + N+LI MYSKCG + A +F+NM R ++WN+M+ GY++HGL +E
Sbjct: 280 VLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREV 339
Query: 324 ISLFEEMIKQG-VDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMV--EHGVQPKLDHYSCI 380
+ LF M + V PDAVT L++LS C HG + G F+ MV E+G +P +HY CI
Sbjct: 340 LELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCI 399
Query: 381 VDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCS 440
VD+LGRAG I EA +FI+ MP P A + GSLL + R+H +V IG + +EP +
Sbjct: 400 VDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENA 459
Query: 441 ATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMS 500
L+NLYAS G W V VR +M K + PG SWI+ + +H F A D+++ R
Sbjct: 460 GNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRRE 519
Query: 501 DIL 503
++L
Sbjct: 520 EVL 522
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 161/281 (57%), Gaps = 9/281 (3%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV 203
+++C KR L G + H I T ++ Y+ + L+ Y +C DA +V +EMPE+NV
Sbjct: 59 LNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNV 118
Query: 204 VSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQ 263
VSWTA+I+ ++Q L +F M S+ KPN FT+ ++L++C+ + LG G+ H
Sbjct: 119 VSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGL 178
Query: 264 IIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEA 323
I++ + S++ V ++L+ MY+K G I +A IFE + RDVV+ ++IAGYAQ GL +EA
Sbjct: 179 IVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEA 238
Query: 324 ISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSC---- 379
+ +F + +G+ P+ VTY SLL++ L+ G+ H ++ +L Y+
Sbjct: 239 LEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHC----HVLRRELPFYAVLQNS 294
Query: 380 IVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHG 420
++D+ + G + AR +NMP A+ W ++L HG
Sbjct: 295 LIDMYSKCGNLSYARRLFDNMPE-RTAISWNAMLVGYSKHG 334
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 285 bits (729), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 168/449 (37%), Positives = 248/449 (55%), Gaps = 40/449 (8%)
Query: 106 NSVI---NHVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCL 162
NS+I N G +L L ++M + + L D L+ +S+C + L G Q H
Sbjct: 247 NSMISGFNQRGYDLRALDIFSKM--LRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSH 304
Query: 163 AITTGFIANVYVGSSLISLYSRCALSGDAYRVFEE------------------------- 197
+TTGF + V ++LIS+YSRC A R+ E+
Sbjct: 305 IVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMN 364
Query: 198 --------MPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACM 249
+ +R+VV+WTA+I G+ Q + LF M G +PN +T ++LS
Sbjct: 365 QAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVAS 424
Query: 250 GSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM-VGRDVVTWN 308
+L +G+ H ++ G + V NALI MY+K G I A F+ + RD V+W
Sbjct: 425 SLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWT 484
Query: 309 SMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE- 367
SMI AQHG A+EA+ LFE M+ +G+ PD +TY+ + S+C H GLV +G+ YF+ M +
Sbjct: 485 SMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDV 544
Query: 368 HGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIE 427
+ P L HY+C+VDL GRAGL++EA++FIE MP+ P+ V WGSLLS+ R+H N+ +G
Sbjct: 545 DKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKV 604
Query: 428 AAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVH 487
AAE LLLEP S LANLY++ G W + A++RK MKD +K G SWIEVK KVH
Sbjct: 605 AAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVH 664
Query: 488 RFEAQDKSNRRMSDILLVIDSLVDHMSSL 516
F +D ++ ++I + + + D + +
Sbjct: 665 VFGVEDGTHPEKNEIYMTMKKIWDEIKKM 693
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 172/399 (43%), Gaps = 74/399 (18%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGD--------- 190
L++ ++S + R + G + H + G NV V +SL+++Y++C GD
Sbjct: 149 LTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKC---GDPMMAKFVFD 205
Query: 191 -------------------------AYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLEL 225
A FE+M ER++V+W ++I+GF Q L++
Sbjct: 206 RMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDI 265
Query: 226 F-HLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYS 284
F ++R S + P+ FT S+LSAC L G+ H I+ GF V NALI+MYS
Sbjct: 266 FSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYS 325
Query: 285 KCGVIDDALY---------------------------------IFENMVGRDVVTWNSMI 311
+CG ++ A IF ++ RDVV W +MI
Sbjct: 326 RCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMI 385
Query: 312 AGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQ 371
GY QHG EAI+LF M+ G P++ T ++LS + G+ S V+ G
Sbjct: 386 VGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEI 445
Query: 372 PKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAES 431
+ + ++ + +AG I A + + + V W S++ + HG+ +E E+
Sbjct: 446 YSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFET 505
Query: 432 RLL--LEPGCSATLQQLANLYASVGWWNQVARVRKLMKD 468
L+ L P T + + G NQ + +MKD
Sbjct: 506 MLMEGLRPD-HITYVGVFSACTHAGLVNQGRQYFDMMKD 543
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 134/303 (44%), Gaps = 63/303 (20%)
Query: 160 HCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRV 219
HC I +G + +VY+ ++L+++YS+ + A ++F+EMP R SW +++ +++ +
Sbjct: 37 HCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDM 96
Query: 220 DMCLELFHL-------------------------------MRGSEMKPNYFTYTSLLSAC 248
D E F M ++P FT T++L++
Sbjct: 97 DSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASV 156
Query: 249 MGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKC---------------------- 286
+ + G+ H I+++G + V N+L+ MY+KC
Sbjct: 157 AATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWN 216
Query: 287 ---------GVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQG-VD 336
G +D A+ FE M RD+VTWNSMI+G+ Q G A+ +F +M++ +
Sbjct: 217 AMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLS 276
Query: 337 PDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDF 396
PD T S+LS+C + + G+ + +V G + ++ + R G + AR
Sbjct: 277 PDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRL 336
Query: 397 IEN 399
IE
Sbjct: 337 IEQ 339
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 74/138 (53%), Gaps = 1/138 (0%)
Query: 277 NALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVD 336
N +++ YSK G +D F+ + RD V+W +MI GY G +AI + +M+K+G++
Sbjct: 84 NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIE 143
Query: 337 PDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDF 396
P T ++L+S ++ G+ + +V+ G++ + + ++++ + G A+ F
Sbjct: 144 PTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAK-F 202
Query: 397 IENMPVCPNAVIWGSLLS 414
+ + V + W ++++
Sbjct: 203 VFDRMVVRDISSWNAMIA 220
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 285 bits (728), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 135/360 (37%), Positives = 224/360 (62%)
Query: 158 QYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEW 217
Q H L G +++ GS+LI +YS C D+ VF+EM +++V W ++ AG+ Q+
Sbjct: 475 QIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQS 534
Query: 218 RVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDN 277
+ L LF ++ S +P+ FT+ ++++A ++ G+ HCQ+++ G ++ N
Sbjct: 535 ENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITN 594
Query: 278 ALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDP 337
AL+ MY+KCG +DA F++ RDVV WNS+I+ YA HG ++A+ + E+M+ +G++P
Sbjct: 595 ALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEP 654
Query: 338 DAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFI 397
+ +T++ +LS+C H GLV++G F M+ G++P+ +HY C+V LLGRAG + +AR+ I
Sbjct: 655 NYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELI 714
Query: 398 ENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWN 457
E MP P A++W SLLS GNV + AAE +L +P S + L+N+YAS G W
Sbjct: 715 EKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWT 774
Query: 458 QVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSLVDHMSSLS 517
+ +VR+ MK +G+ PG SWI + +VH F ++DKS+ + + I V+D L+ + +S
Sbjct: 775 EAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIRGVS 834
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 155/305 (50%), Gaps = 5/305 (1%)
Query: 120 KTTTEMSSVMEQ-ELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSL 178
K E+ + M + L D+ S ++SC S L G Q H I + YV +SL
Sbjct: 332 KEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSL 391
Query: 179 ISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQ---EWRVDMCLELFHLMRGSEMK 235
I +Y++C DA +VF+ +VV + A+I G+++ +W + L +F MR ++
Sbjct: 392 IDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIR 451
Query: 236 PNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYI 295
P+ T+ SLL A +LG + H + + G + + +ALI +YS C + D+ +
Sbjct: 452 PSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLV 511
Query: 296 FENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLV 355
F+ M +D+V WNSM AGY Q +EA++LF E+ PD T+ +++++ + V
Sbjct: 512 FDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASV 571
Query: 356 KEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSS 415
+ GQ + +++ G++ + ++D+ + G +A ++ + V W S++SS
Sbjct: 572 QLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDS-AASRDVVCWNSVISS 630
Query: 416 SRLHG 420
HG
Sbjct: 631 YANHG 635
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 152/293 (51%), Gaps = 10/293 (3%)
Query: 128 VMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCAL 187
+ME + D LS +S+C L GG Q H + G + + + LI Y +C
Sbjct: 240 LMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGR 299
Query: 188 SGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSA 247
A+++F MP +N++SWT +++G+ Q +ELF M +KP+ + +S+L++
Sbjct: 300 VIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTS 359
Query: 248 CMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTW 307
C ALG+G H I+ + +V N+LI MY+KC + DA +F+ DVV +
Sbjct: 360 CASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLF 419
Query: 308 NSMIAGYAQHGLA---QEAISLFEEMIKQGVDPDAVTYLSLL---SSCRHGGLVKEGQVY 361
N+MI GY++ G EA+++F +M + + P +T++SLL +S GL K+
Sbjct: 420 NAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQ---I 476
Query: 362 FNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLS 414
M ++G+ + S ++D+ ++++R + M V + VIW S+ +
Sbjct: 477 HGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKV-KDLVIWNSMFA 528
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 181/387 (46%), Gaps = 30/387 (7%)
Query: 160 HCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRV 219
H I G + Y+ + LI+LYSR A +VFE+MPERN+VSW+ +++
Sbjct: 67 HGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIY 126
Query: 220 DMCLELF-HLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQ----IIQMGFHSYLH 274
+ L +F R + PN + +S + AC SG G GR Q +++ GF ++
Sbjct: 127 EESLVVFLEFWRTRKDSPNEYILSSFIQAC--SGLDGRGRWMVFQLQSFLVKSGFDRDVY 184
Query: 275 VDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQG 334
V LI Y K G ID A +F+ + + VTW +MI+G + G + ++ LF ++++
Sbjct: 185 VGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDN 244
Query: 335 VDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREAR 394
V PD ++LS+C ++ G+ ++ +G++ + ++D + G + A
Sbjct: 245 VVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAH 304
Query: 395 DFIENMPVCPNAVIWGSLLSSSR---LHGNVWIGIEAAESRLLLEP---GCSATLQQLAN 448
MP N + W +LLS + LH + + + S+ L+P CS+ L A+
Sbjct: 305 KLFNGMP-NKNIISWTTLLSGYKQNALHKEA-MELFTSMSKFGLKPDMYACSSILTSCAS 362
Query: 449 LYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQD--KSNRRMSDILLVI 506
L+A +G+ QV +K N G+ S + + D R++ DI
Sbjct: 363 LHA-LGFGTQVHAYT-------IKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAA 414
Query: 507 D-----SLVDHMSSLSLQSHMYEEENI 528
D ++++ S L Q ++E NI
Sbjct: 415 DVVLFNAMIEGYSRLGTQWELHEALNI 441
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 106/192 (55%)
Query: 158 QYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEW 217
Q + +GF +VYVG+ LI Y + A VF+ +PE++ V+WT +I+G +
Sbjct: 169 QLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMG 228
Query: 218 RVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDN 277
R + L+LF+ + + P+ + +++LSAC L G+ H I++ G + N
Sbjct: 229 RSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMN 288
Query: 278 ALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDP 337
LI Y KCG + A +F M +++++W ++++GY Q+ L +EA+ LF M K G+ P
Sbjct: 289 VLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKP 348
Query: 338 DAVTYLSLLSSC 349
D S+L+SC
Sbjct: 349 DMYACSSILTSC 360
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 103/209 (49%), Gaps = 6/209 (2%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP 199
++ V++ G+ + G ++HC + G N Y+ ++L+ +Y++C DA++ F+
Sbjct: 558 FANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAA 617
Query: 200 ERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRG 259
R+VV W ++I+ +A L++ M ++PNY T+ +LSAC +G + G
Sbjct: 618 SRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLK 677
Query: 260 AHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRD-VVTWNSMIAGYAQHG 318
+++ G ++++ + G ++ A + E M + + W S+++G A+ G
Sbjct: 678 QFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAG 737
Query: 319 ---LAQEAISLFEEMIKQGVDPDAVTYLS 344
LA+ A + ++ D + T LS
Sbjct: 738 NVELAEHAAEM--AILSDPKDSGSFTMLS 764
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 91/192 (47%), Gaps = 8/192 (4%)
Query: 241 YTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMV 300
+ LL L Y H QII G ++ N LI +YS+ G + A +FE M
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 301 GRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVD-PDAVTYLSLLSSCRHGGLVKEGQ 359
R++V+W++M++ HG+ +E++ +F E + D P+ S + +C GL G+
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQAC--SGLDGRGR 164
Query: 360 -VYF---NSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSS 415
+ F + +V+ G + + ++D + G I AR + +P + V W +++S
Sbjct: 165 WMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPE-KSTVTWTTMISG 223
Query: 416 SRLHGNVWIGIE 427
G ++ ++
Sbjct: 224 CVKMGRSYVSLQ 235
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 140/372 (37%), Positives = 233/372 (62%), Gaps = 1/372 (0%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP 199
+S +S+CG D + HCL++ T N+YVG++L+ LY++C + DA +VFE M
Sbjct: 165 ISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQ 224
Query: 200 ERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRG 259
+++ V+W++++AG+ Q + L L+ + ++ N FT +S++ AC AL G+
Sbjct: 225 DKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQ 284
Query: 260 AHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGL 319
H I + GF S + V ++ + MY+KCG + ++ IF + +++ WN++I+G+A+H
Sbjct: 285 MHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHAR 344
Query: 320 AQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSM-VEHGVQPKLDHYS 378
+E + LFE+M + G+ P+ VT+ SLLS C H GLV+EG+ +F M +G+ P + HYS
Sbjct: 345 PKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYS 404
Query: 379 CIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPG 438
C+VD+LGRAGL+ EA + I+++P P A IWGSLL+S R++ N+ + AAE LEP
Sbjct: 405 CMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPE 464
Query: 439 CSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRR 498
+ L+N+YA+ W ++A+ RKL++D +K G SWI++K KVH F + + R
Sbjct: 465 NAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPR 524
Query: 499 MSDILLVIDSLV 510
+ +I +D+LV
Sbjct: 525 IREICSTLDNLV 536
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 153/319 (47%), Gaps = 7/319 (2%)
Query: 160 HCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRV 219
H I +V + + LI+ YS+C A +VF+ M ER++VSW +I + +
Sbjct: 84 HGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRME 143
Query: 220 DMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNAL 279
L++F MR K + FT +S+LSAC + + HC ++ L+V AL
Sbjct: 144 SEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTAL 203
Query: 280 IAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDA 339
+ +Y+KCG+I DA+ +FE+M + VTW+SM+AGY Q+ +EA+ L+ + ++ +
Sbjct: 204 LDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQ 263
Query: 340 VTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIEN 399
T S++ +C + + EG+ + + G + S VD+ + G +RE+
Sbjct: 264 FTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSE 323
Query: 400 MPVCPNAVIWGSLLSSSRLHG---NVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWW 456
+ N +W +++S H V I E + + P T L ++ G
Sbjct: 324 VQE-KNLELWNTIISGFAKHARPKEVMILFEKMQQD-GMHPN-EVTFSSLLSVCGHTGLV 380
Query: 457 NQVARVRKLMKDK-GLKPN 474
+ R KLM+ GL PN
Sbjct: 381 EEGRRFFKLMRTTYGLSPN 399
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 90/171 (52%), Gaps = 1/171 (0%)
Query: 244 LLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRD 303
+L C +GA+ + H +II++ + + N LI YSKCG ++ A +F+ M+ R
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 304 VVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFN 363
+V+WN+MI Y ++ + EA+ +F EM +G T S+LS+C E +
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 364 SMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLS 414
V+ + L + ++DL + G+I++A E+M ++V W S+++
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQD-KSSVTWSSMVA 236
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 282 bits (721), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 148/398 (37%), Positives = 231/398 (58%), Gaps = 1/398 (0%)
Query: 120 KTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLI 179
K T ++++ + D L++AVS+C + L G Q H A +GF +++ ++L+
Sbjct: 574 KALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALV 633
Query: 180 SLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYF 239
+LYSRC ++Y FE+ + ++W A+++GF Q + L +F M + N F
Sbjct: 634 TLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNF 693
Query: 240 TYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM 299
T+ S + A + + G+ H I + G+ S V NALI+MY+KCG I DA F +
Sbjct: 694 TFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEV 753
Query: 300 VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQ 359
++ V+WN++I Y++HG EA+ F++MI V P+ VT + +LS+C H GLV +G
Sbjct: 754 STKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGI 813
Query: 360 VYFNSM-VEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRL 418
YF SM E+G+ PK +HY C+VD+L RAGL+ A++FI+ MP+ P+A++W +LLS+ +
Sbjct: 814 AYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVV 873
Query: 419 HGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSS 478
H N+ IG AA L LEP SAT L+NLYA W+ R+ MK+KG+K PG S
Sbjct: 874 HKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQS 933
Query: 479 WIEVKSKVHRFEAQDKSNRRMSDILLVIDSLVDHMSSL 516
WIEVK+ +H F D+++ +I L S +
Sbjct: 934 WIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEI 971
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 135/282 (47%), Gaps = 1/282 (0%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP 199
L+ V +C + L G Q H GF +N + +L++LY++CA A F E
Sbjct: 392 LASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETE 451
Query: 200 ERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRG 259
NVV W ++ + + +F M+ E+ PN +TY S+L C+ G L G
Sbjct: 452 VENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQ 511
Query: 260 AHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGL 319
H QII+ F +V + LI MY+K G +D A I G+DVV+W +MIAGY Q+
Sbjct: 512 IHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNF 571
Query: 320 AQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSC 379
+A++ F +M+ +G+ D V + +S+C +KEGQ G L +
Sbjct: 572 DDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNA 631
Query: 380 IVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGN 421
+V L R G I E+ E N + W +L+S + GN
Sbjct: 632 LVTLYSRCGKIEESYLAFEQTEAGDN-IAWNALVSGFQQSGN 672
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 145/289 (50%), Gaps = 6/289 (2%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV 203
+ +C DL G Q H I T F N YV S LI +Y++ A+ + ++V
Sbjct: 497 LKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDV 556
Query: 204 VSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQ 263
VSWT +IAG+ Q D L F M ++ + T+ +SAC G AL G+ H Q
Sbjct: 557 VSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQ 616
Query: 264 IIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEA 323
GF S L NAL+ +YS+CG I+++ FE D + WN++++G+ Q G +EA
Sbjct: 617 ACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEA 676
Query: 324 ISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDL 383
+ +F M ++G+D + T+ S + + +K+G+ + + G + + + ++ +
Sbjct: 677 LRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISM 736
Query: 384 LGRAGLIREA-RDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAES 431
+ G I +A + F+E N V W +++++ HG G EA +S
Sbjct: 737 YAKCGSISDAEKQFLE--VSTKNEVSWNAIINAYSKHG---FGSEALDS 780
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 128/256 (50%), Gaps = 1/256 (0%)
Query: 158 QYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEW 217
Q H + G + V + LI LYSR A RVF+ + ++ SW A+I+G ++
Sbjct: 208 QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNE 267
Query: 218 RVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDN 277
+ LF M + P + ++S+LSAC +L G H ++++GF S +V N
Sbjct: 268 CEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCN 327
Query: 278 ALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDP 337
AL+++Y G + A +IF NM RD VT+N++I G +Q G ++A+ LF+ M G++P
Sbjct: 328 ALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEP 387
Query: 338 DAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFI 397
D+ T SL+ +C G + GQ + G +++L + I A D+
Sbjct: 388 DSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYF 447
Query: 398 ENMPVCPNAVIWGSLL 413
V N V+W +L
Sbjct: 448 LETEV-ENVVLWNVML 462
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 129/260 (49%), Gaps = 4/260 (1%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP 199
S +S+C L G Q H L + GF ++ YV ++L+SLY A +F M
Sbjct: 291 FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS 350
Query: 200 ERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRG 259
+R+ V++ +I G +Q + +ELF M ++P+ T SL+ AC G L G+
Sbjct: 351 QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQ 410
Query: 260 AHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGL 319
H ++GF S ++ AL+ +Y+KC I+ AL F +VV WN M+ Y
Sbjct: 411 LHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDD 470
Query: 320 AQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSC 379
+ + +F +M + + P+ TY S+L +C G ++ G+ + +++ Q L+ Y C
Sbjct: 471 LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQ--LNAYVC 528
Query: 380 --IVDLLGRAGLIREARDFI 397
++D+ + G + A D +
Sbjct: 529 SVLIDMYAKLGKLDTAWDIL 548
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 127/272 (46%), Gaps = 20/272 (7%)
Query: 153 LNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGD---AYRVFEEMPERNVVSWTAI 209
L+ G + H + G +N + L Y GD A++VF+EMPER + +W +
Sbjct: 101 LDEGRKLHSQILKLGLDSNGCLSEKLFDFY---LFKGDLYGAFKVFDEMPERTIFTWNKM 157
Query: 210 IAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMG-SGALGYGRGAHCQIIQMG 268
I A + LF M + PN T++ +L AC G S A H +I+ G
Sbjct: 158 IKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQG 217
Query: 269 FHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFE 328
V N LI +YS+ G +D A +F+ + +D +W +MI+G +++ EAI LF
Sbjct: 218 LRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFC 277
Query: 329 EMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKL----DHYSC--IVD 382
+M G+ P + S+LS+C+ ++ G+ HG+ KL D Y C +V
Sbjct: 278 DMYVLGIMPTPYAFSSVLSACKKIESLEIGEQL------HGLVLKLGFSSDTYVCNALVS 331
Query: 383 LLGRAGLIREARDFIENMPVCPNAVIWGSLLS 414
L G + A NM +AV + +L++
Sbjct: 332 LYFHLGNLISAEHIFSNMSQ-RDAVTYNTLIN 362
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 88/189 (46%), Gaps = 11/189 (5%)
Query: 215 QEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGS-GALGYGRGAHCQIIQMGFHSYL 273
QE R+D + ++PN+ T LL C+ + G+L GR H QI+++G S
Sbjct: 68 QEKRIDS-------VENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNG 120
Query: 274 HVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQ 333
+ L Y G + A +F+ M R + TWN MI A L E LF M+ +
Sbjct: 121 CLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSE 180
Query: 334 GVDPDAVTYLSLLSSCRHGGLVKE--GQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIR 391
V P+ T+ +L +CR G + + Q++ ++ G++ + ++DL R G +
Sbjct: 181 NVTPNEGTFSGVLEACRGGSVAFDVVEQIH-ARILYQGLRDSTVVCNPLIDLYSRNGFVD 239
Query: 392 EARDFIENM 400
AR + +
Sbjct: 240 LARRVFDGL 248
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 278 bits (710), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 142/375 (37%), Positives = 216/375 (57%), Gaps = 1/375 (0%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP 199
S A +CG+ D G Q A G +N V +S+IS++ + DA R FE +
Sbjct: 376 FSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLS 435
Query: 200 ERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRG 259
E+N+VS+ + G + + +L + E+ + FT+ SLLS G++ G
Sbjct: 436 EKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQ 495
Query: 260 AHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGL 319
H Q++++G V NALI+MYSKCG ID A +F M R+V++W SMI G+A+HG
Sbjct: 496 IHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGF 555
Query: 320 AQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE-HGVQPKLDHYS 378
A + F +MI++GV P+ VTY+++LS+C H GLV EG +FNSM E H ++PK++HY+
Sbjct: 556 AIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYA 615
Query: 379 CIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPG 438
C+VDLL RAGL+ +A +FI MP + ++W + L + R+H N +G AA L L+P
Sbjct: 616 CMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPN 675
Query: 439 CSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRR 498
A QL+N+YA G W + +R+ MK++ L G SWIEV K+H+F D ++
Sbjct: 676 EPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPN 735
Query: 499 MSDILLVIDSLVDHM 513
I +D L+ +
Sbjct: 736 AHQIYDELDRLITEI 750
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 151/289 (52%), Gaps = 14/289 (4%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSG---DAYRVFE 196
LS S+C +L+ G Q H AI +G + +V SL+ +Y++C+ G D +VF+
Sbjct: 272 LSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFD 329
Query: 197 EMPERNVVSWTAIIAGFAQEWRVDM-CLELF-HLMRGSEMKPNYFTYTSLLSACMGSGAL 254
M + +V+SWTA+I G+ + + + LF ++ ++PN+FT++S AC
Sbjct: 330 RMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDP 389
Query: 255 GYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGY 314
G+ Q + G S V N++I+M+ K ++DA FE++ +++V++N+ + G
Sbjct: 390 RVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGT 449
Query: 315 AQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKL 374
++ ++A L E+ ++ + A T+ SLLS + G +++G+ + +V+ G+
Sbjct: 450 CRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQ 509
Query: 375 DHYSCIVDLLGRAGLIREAR---DFIENMPVCPNAVIWGSLLSSSRLHG 420
+ ++ + + G I A +F+EN N + W S+++ HG
Sbjct: 510 PVCNALISMYSKCGSIDTASRVFNFMENR----NVISWTSMITGFAKHG 554
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 130/274 (47%), Gaps = 16/274 (5%)
Query: 83 PKKSASDIENRRSHLRLIEDMLENSVINHVGSNLATLKTTTEMSSVMEQE--LGVDVCFL 140
P KS + NR + + D L ++ H+ N L+ +M ++ +D
Sbjct: 15 PIKSQPSVSNRIN----VADRL---ILRHL--NAGDLRGAVSALDLMARDGIRPMDSVTF 65
Query: 141 SHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP- 199
S + SC RD G H I + + +SLISLYS+ S A VFE M
Sbjct: 66 SSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRR 125
Query: 200 --ERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYG 257
+R+VVSW+A++A + R +++F + PN + YT+++ AC S +G G
Sbjct: 126 FGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVG 185
Query: 258 RGAHCQIIQMG-FHSYLHVDNALIAMYSKC-GVIDDALYIFENMVGRDVVTWNSMIAGYA 315
R +++ G F S + V +LI M+ K ++A +F+ M +VVTW MI
Sbjct: 186 RVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCM 245
Query: 316 QHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSC 349
Q G +EAI F +M+ G + D T S+ S+C
Sbjct: 246 QMGFPREAIRFFLDMVLSGFESDKFTLSSVFSAC 279
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 97/214 (45%), Gaps = 2/214 (0%)
Query: 106 NSVINHVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAIT 165
N+ ++ NL + +S + E+ELGV + +S + + G Q H +
Sbjct: 443 NTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVK 502
Query: 166 TGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLEL 225
G N V ++LIS+YS+C A RVF M RNV+SWT++I GFA+ LE
Sbjct: 503 LGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLET 562
Query: 226 FHLMRGSEMKPNYFTYTSLLSACMGSGALGYG-RGAHCQIIQMGFHSYLHVDNALIAMYS 284
F+ M +KPN TY ++LSAC G + G R + + ++ +
Sbjct: 563 FNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLC 622
Query: 285 KCGVIDDALYIFENM-VGRDVVTWNSMIAGYAQH 317
+ G++ DA M DV+ W + + H
Sbjct: 623 RAGLLTDAFEFINTMPFQADVLVWRTFLGACRVH 656
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 80/146 (54%), Gaps = 4/146 (2%)
Query: 228 LMRGSEMKP-NYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKC 286
LM ++P + T++SLL +C+ + G+ H ++I+ + N+LI++YSK
Sbjct: 51 LMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKS 110
Query: 287 GVIDDALYIFENMV---GRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYL 343
G A +FE M RDVV+W++M+A Y +G +AI +F E ++ G+ P+ Y
Sbjct: 111 GDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYT 170
Query: 344 SLLSSCRHGGLVKEGQVYFNSMVEHG 369
+++ +C + V G+V +++ G
Sbjct: 171 AVIRACSNSDFVGVGRVTLGFLMKTG 196
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 278 bits (710), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 142/377 (37%), Positives = 224/377 (59%), Gaps = 3/377 (0%)
Query: 129 MEQE-LGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCAL 187
ME+E + DV ++ ++ C R L+ G + H +++V ++L+ +Y++C
Sbjct: 388 MEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGS 447
Query: 188 SGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLM-RGSEMKPNYFTYTSLLS 246
+A VF EM ++++SW II G+++ + L LF+L+ P+ T +L
Sbjct: 448 MQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLP 507
Query: 247 ACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVT 306
AC A GR H I++ G+ S HV N+L+ MY+KCG + A +F+++ +D+V+
Sbjct: 508 ACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVS 567
Query: 307 WNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMV 366
W MIAGY HG +EAI+LF +M + G++ D ++++SLL +C H GLV EG +FN M
Sbjct: 568 WTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMR 627
Query: 367 -EHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIG 425
E ++P ++HY+CIVD+L R G + +A FIENMP+ P+A IWG+LL R+H +V +
Sbjct: 628 HECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLA 687
Query: 426 IEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSK 485
+ AE LEP + +AN+YA W QV R+RK + +GL+ NPG SWIE+K +
Sbjct: 688 EKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGR 747
Query: 486 VHRFEAQDKSNRRMSDI 502
V+ F A D SN +I
Sbjct: 748 VNIFVAGDSSNPETENI 764
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 90/273 (32%), Positives = 145/273 (53%), Gaps = 6/273 (2%)
Query: 146 SCGSK-----RDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPE 200
SC SK R ++GG Q H + +GF VG+SL++ Y + A +VF+EM E
Sbjct: 199 SCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTE 258
Query: 201 RNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGA 260
R+V+SW +II G+ + L +F M S ++ + T S+ + C S + GR
Sbjct: 259 RDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAV 318
Query: 261 HCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLA 320
H ++ F N L+ MYSKCG +D A +F M R VV++ SMIAGYA+ GLA
Sbjct: 319 HSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLA 378
Query: 321 QEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCI 380
EA+ LFEEM ++G+ PD T ++L+ C L+ EG+ + E+ + + + +
Sbjct: 379 GEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNAL 438
Query: 381 VDLLGRAGLIREARDFIENMPVCPNAVIWGSLL 413
+D+ + G ++EA M V + + W +++
Sbjct: 439 MDMYAKCGSMQEAELVFSEMRV-KDIISWNTII 470
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 170/340 (50%), Gaps = 10/340 (2%)
Query: 90 IENRR--SHLRLIEDMLE------NSVINHVGSNLATLKTTTEMSSVMEQELGVDVCFLS 141
++N+R S ++ ++M E NS+IN SN K + ++ + +D+ +
Sbjct: 241 LKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIV 300
Query: 142 HAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPER 201
+ C R ++ G H + + F ++L+ +YS+C A VF EM +R
Sbjct: 301 SVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDR 360
Query: 202 NVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAH 261
+VVS+T++IAG+A+E ++LF M + P+ +T T++L+ C L G+ H
Sbjct: 361 SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVH 420
Query: 262 CQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQ 321
I + + V NAL+ MY+KCG + +A +F M +D+++WN++I GY+++ A
Sbjct: 421 EWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYAN 480
Query: 322 EAISLFEEMIKQG-VDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCI 380
EA+SLF ++++ PD T +L +C +G+ ++ +G + +
Sbjct: 481 EALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSL 540
Query: 381 VDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHG 420
VD+ + G + A +++ + V W +++ +HG
Sbjct: 541 VDMYAKCGALLLAHMLFDDIA-SKDLVSWTVMIAGYGMHG 579
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 125/268 (46%), Gaps = 7/268 (2%)
Query: 135 VDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRV 194
+D L + C + L G + GF+ + +GS L +Y+ C +A RV
Sbjct: 92 IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRV 151
Query: 195 FEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGAL 254
F+E+ + W ++ A+ + LF M S ++ + +T++ + + ++
Sbjct: 152 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 211
Query: 255 GYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGY 314
G H I++ GF V N+L+A Y K +D A +F+ M RDV++WNS+I GY
Sbjct: 212 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 271
Query: 315 AQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFN-------SMVE 367
+GLA++ +S+F +M+ G++ D T +S+ + C L+ G+ + S +
Sbjct: 272 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 331
Query: 368 HGVQPKLDHYSCIVDLLGRAGLIREARD 395
LD YS DL + RE D
Sbjct: 332 RFCNTLLDMYSKCGDLDSAKAVFREMSD 359
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 278 bits (710), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 143/379 (37%), Positives = 231/379 (60%), Gaps = 5/379 (1%)
Query: 139 FLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEM 198
FL AV++ D+ G H + I +GF + +YV +SL+ LY+ C AY+VF++M
Sbjct: 126 FLIKAVTTMA---DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKM 182
Query: 199 PERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGR 258
PE+++V+W ++I GFA+ + + L L+ M +KP+ FT SLLSAC GAL G+
Sbjct: 183 PEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGK 242
Query: 259 GAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHG 318
H +I++G LH N L+ +Y++CG +++A +F+ MV ++ V+W S+I G A +G
Sbjct: 243 RVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNG 302
Query: 319 LAQEAISLFEEM-IKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSM-VEHGVQPKLDH 376
+EAI LF+ M +G+ P +T++ +L +C H G+VKEG YF M E+ ++P+++H
Sbjct: 303 FGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEH 362
Query: 377 YSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLE 436
+ C+VDLL RAG +++A ++I++MP+ PN VIW +LL + +HG+ + A L LE
Sbjct: 363 FGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLE 422
Query: 437 PGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSN 496
P S L+N+YAS W+ V ++RK M G+K PG S +EV ++VH F DKS+
Sbjct: 423 PNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSH 482
Query: 497 RRMSDILLVIDSLVDHMSS 515
+ I + + + S
Sbjct: 483 PQSDAIYAKLKEMTGRLRS 501
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 150/280 (53%), Gaps = 12/280 (4%)
Query: 158 QYHCLAITTGF-IANVYVGSSLI----SLYSRCALSGDAYRVFEEMPER-NVVSWTAIIA 211
Q H +I G I++ +G LI SL S +S A++VF ++ + NV W +I
Sbjct: 35 QIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSY-AHKVFSKIEKPINVFIWNTLIR 93
Query: 212 GFAQEWRVDMCLELFHLMRGSEM-KPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFH 270
G+A+ L+ MR S + +P+ TY L+ A + G H +I+ GF
Sbjct: 94 GYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFG 153
Query: 271 SYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEM 330
S ++V N+L+ +Y+ CG + A +F+ M +D+V WNS+I G+A++G +EA++L+ EM
Sbjct: 154 SLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 213
Query: 331 IKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLI 390
+G+ PD T +SLLS+C G + G+ M++ G+ L + ++DL R G +
Sbjct: 214 NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRV 273
Query: 391 REARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAE 430
EA+ + M V N+V W SL+ ++G G EA E
Sbjct: 274 EEAKTLFDEM-VDKNSVSWTSLIVGLAVNG---FGKEAIE 309
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 158/411 (38%), Positives = 239/411 (58%), Gaps = 17/411 (4%)
Query: 128 VMEQELGVDVCFLSHAVSSCGSKRDLNGGVQ-YHCLAITTGFIANVYVGSSLISLYSRCA 186
V++Q L D C +S + G + G + ++ + + N Y I+ SR
Sbjct: 278 VIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAY-----ITGLSRNG 332
Query: 187 LSGDAYRVFEEMPER----NVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYT 242
L A +FE E+ NVVSWT+IIAG AQ + LELF M+ + +KPN+ T
Sbjct: 333 LVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIP 392
Query: 243 SLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGR 302
S+L AC ALG+GR H +++ +HV +ALI MY+KCG I+ + +F M +
Sbjct: 393 SMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK 452
Query: 303 DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYF 362
++V WNS++ G++ HG A+E +S+FE +++ + PD +++ SLLS+C GL EG YF
Sbjct: 453 NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYF 512
Query: 363 NSMV-EHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGN 421
M E+G++P+L+HYSC+V+LLGRAG ++EA D I+ MP P++ +WG+LL+S RL N
Sbjct: 513 KMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNN 572
Query: 422 VWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIE 481
V + AAE LEP T L+N+YA+ G W +V +R M+ GLK NPG SWI+
Sbjct: 573 VDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQ 632
Query: 482 VKSKVHRFEAQDKSNRRMSDILLVIDSLVD------HMSSLSLQSHMYEEE 526
VK++V+ A DKS+ ++ I +D + H +L H EE+
Sbjct: 633 VKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQ 683
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 108/456 (23%), Positives = 182/456 (39%), Gaps = 86/456 (18%)
Query: 102 DMLENSVINHVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAV-----------SSCGSK 150
D++ S+ + + ++L + + Q +GV SH + C
Sbjct: 70 DLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAEL 129
Query: 151 RDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPER--------- 201
G Q HC++ +G + +V S+ +Y RC GDA +VF+ M ++
Sbjct: 130 SAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALL 189
Query: 202 --------------------------NVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMK 235
N+VSW I++GF + + +F +
Sbjct: 190 CAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFC 249
Query: 236 PNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKC--------- 286
P+ T +S+L + S L GR H +I+ G V +A+I MY K
Sbjct: 250 PDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISL 309
Query: 287 ----------------------GVIDDALYIF----ENMVGRDVVTWNSMIAGYAQHGLA 320
G++D AL +F E + +VV+W S+IAG AQ+G
Sbjct: 310 FNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKD 369
Query: 321 QEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCI 380
EA+ LF EM GV P+ VT S+L +C + + G+ V + + S +
Sbjct: 370 IEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSAL 429
Query: 381 VDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAES--RLLLEPG 438
+D+ + G I ++ MP N V W SL++ +HG + ES R L+P
Sbjct: 430 IDMYAKCGRINLSQIVFNMMPT-KNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPD 488
Query: 439 CSATLQQLANLYASVGWWNQVARVRKLMKDK-GLKP 473
+ L + VG ++ + K+M ++ G+KP
Sbjct: 489 -FISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKP 523
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 106/238 (44%)
Query: 157 VQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQE 216
Q H + +G + Y+ + LI+ YS DA V + +P+ + S++++I +
Sbjct: 35 TQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKA 94
Query: 217 WRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVD 276
+ +F M + P+ +L C A G+ HC G V
Sbjct: 95 KLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQ 154
Query: 277 NALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVD 336
++ MY +CG + DA +F+ M +DVVT ++++ YA+ G +E + + EM G++
Sbjct: 155 GSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIE 214
Query: 337 PDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREAR 394
+ V++ +LS G KE V F + G P S ++ +G + ++ R
Sbjct: 215 ANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGR 272
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 275 bits (704), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 139/366 (37%), Positives = 225/366 (61%), Gaps = 2/366 (0%)
Query: 152 DLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIA 211
D+ G H + I +GF + +YV +SL+ LY+ C AY+VF++MPE+++V+W ++I
Sbjct: 3 DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVIN 62
Query: 212 GFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHS 271
GFA+ + + L L+ M +KP+ FT SLLSAC GAL G+ H +I++G
Sbjct: 63 GFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR 122
Query: 272 YLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEM- 330
LH N L+ +Y++CG +++A +F+ MV ++ V+W S+I G A +G +EAI LF+ M
Sbjct: 123 NLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME 182
Query: 331 IKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSM-VEHGVQPKLDHYSCIVDLLGRAGL 389
+G+ P +T++ +L +C H G+VKEG YF M E+ ++P+++H+ C+VDLL RAG
Sbjct: 183 STEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQ 242
Query: 390 IREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANL 449
+++A ++I++MP+ PN VIW +LL + +HG+ + A L LEP S L+N+
Sbjct: 243 VKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNM 302
Query: 450 YASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSL 509
YAS W+ V ++RK M G+K PG S +EV ++VH F DKS+ + I + +
Sbjct: 303 YASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEM 362
Query: 510 VDHMSS 515
+ S
Sbjct: 363 TGRLRS 368
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 31/230 (13%)
Query: 106 NSVINHVGSN---LATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCL 162
NSVIN N L TEM+S + G + L +S+C L G + H
Sbjct: 58 NSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSL---LSACAKIGALTLGKRVHVY 114
Query: 163 AITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMC 222
I G N++ + L+ LY+RC +A +F+EM ++N VSWT++I G A
Sbjct: 115 MIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEA 174
Query: 223 LELFHLMRGSE-MKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDN---- 277
+ELF M +E + P T+ +L AC +HC +++ GF + +
Sbjct: 175 IELFKYMESTEGLLPCEITFVGILYAC-----------SHCGMVKEGFEYFRRMREEYKI 223
Query: 278 --------ALIAMYSKCGVIDDALYIFENM-VGRDVVTWNSMIAGYAQHG 318
++ + ++ G + A ++M + +VV W +++ HG
Sbjct: 224 EPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 273
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 275 bits (703), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 149/394 (37%), Positives = 235/394 (59%), Gaps = 7/394 (1%)
Query: 128 VMEQE-LGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCA 186
+M+Q+ + D ++ +S+C + DL+ GV+ H LAI I+ V V ++LI++YS+C
Sbjct: 388 MMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCK 447
Query: 187 LSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEM--KPNYFTYTSL 244
A +F +P +NV+SWT+IIAG R C E +R +M +PN T T+
Sbjct: 448 CIDKALDIFHNIPRKNVISWTSIIAGLRLNNR---CFEALIFLRQMKMTLQPNAITLTAA 504
Query: 245 LSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDV 304
L+AC GAL G+ H +++ G + NAL+ MY +CG ++ A F N +DV
Sbjct: 505 LAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQF-NSQKKDV 563
Query: 305 VTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNS 364
+WN ++ GY++ G + LF+ M+K V PD +T++SLL C +V++G +YF+
Sbjct: 564 TSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSK 623
Query: 365 MVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWI 424
M ++GV P L HY+C+VDLLGRAG ++EA FI+ MPV P+ +WG+LL++ R+H + +
Sbjct: 624 MEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDL 683
Query: 425 GIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKS 484
G +A+ L+ L NLYA G W +VA+VR++MK+ GL + G SW+EVK
Sbjct: 684 GELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKG 743
Query: 485 KVHRFEAQDKSNRRMSDILLVIDSLVDHMSSLSL 518
KVH F + DK + + +I V++ + MS + L
Sbjct: 744 KVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGL 777
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 155/307 (50%), Gaps = 10/307 (3%)
Query: 136 DVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVF 195
DV + +CG DL G + H + G+ ++ V ++LI++Y +C A +F
Sbjct: 195 DVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLF 254
Query: 196 EEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALG 255
+ MP R+++SW A+I+G+ + LELF MRG + P+ T TS++SAC G
Sbjct: 255 DRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRR 314
Query: 256 YGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYA 315
GR H +I GF + V N+L MY G +A +F M +D+V+W +MI+GY
Sbjct: 315 LGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYE 374
Query: 316 QHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLD 375
+ L +AI + M + V PD +T ++LS+C G + G + + ++ +L
Sbjct: 375 YNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGV----ELHKLAIKARLI 430
Query: 376 HYSCI----VDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIG-IEAAE 430
Y + +++ + I +A D N+P N + W S+++ RL+ + I +
Sbjct: 431 SYVIVANNLINMYSKCKCIDKALDIFHNIPR-KNVISWTSIIAGLRLNNRCFEALIFLRQ 489
Query: 431 SRLLLEP 437
++ L+P
Sbjct: 490 MKMTLQP 496
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 151/291 (51%), Gaps = 2/291 (0%)
Query: 125 MSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSR 184
++S+ E + VD V C KR G + + +A+++ V +G++ ++++ R
Sbjct: 82 LNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVR 141
Query: 185 CALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMR-GSEMKPNYFTYTS 243
DA+ VF +M ERN+ SW ++ G+A++ D + L+H M +KP+ +T+
Sbjct: 142 FGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPC 201
Query: 244 LLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRD 303
+L C G L G+ H +++ G+ + V NALI MY KCG + A +F+ M RD
Sbjct: 202 VLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRD 261
Query: 304 VVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFN 363
+++WN+MI+GY ++G+ E + LF M VDPD +T S++S+C G + G+
Sbjct: 262 IISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHA 321
Query: 364 SMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLS 414
++ G + + + + AG REA M + V W +++S
Sbjct: 322 YVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMER-KDIVSWTTMIS 371
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 144/378 (38%), Positives = 223/378 (58%), Gaps = 3/378 (0%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP 199
L V+S + L G + H G+ ++VY+ ++L+ +Y+R A VF MP
Sbjct: 185 LKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMP 244
Query: 200 ERNVVSWTAIIAGFAQEWRVDMCLELFH-LMRGS-EMKPNYFTYTSLLSACMGSGALGYG 257
RNVVSW+A+IA +A+ + L F +MR + + PN T S+L AC AL G
Sbjct: 245 VRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQG 304
Query: 258 RGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQH 317
+ H I++ G S L V +AL+ MY +CG ++ +F+ M RDVV+WNS+I+ Y H
Sbjct: 305 KLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVH 364
Query: 318 GLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSM-VEHGVQPKLDH 376
G ++AI +FEEM+ G P VT++S+L +C H GLV+EG+ F +M +HG++P+++H
Sbjct: 365 GYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEH 424
Query: 377 YSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLE 436
Y+C+VDLLGRA + EA +++M P +WGSLL S R+HGNV + A+ LE
Sbjct: 425 YACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALE 484
Query: 437 PGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSN 496
P + LA++YA W++V RV+KL++ +GL+ PG W+EV+ K++ F + D+ N
Sbjct: 485 PKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFN 544
Query: 497 RRMSDILLVIDSLVDHMS 514
M I + L + M
Sbjct: 545 PLMEQIHAFLVKLAEDMK 562
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 168/338 (49%), Gaps = 13/338 (3%)
Query: 147 CGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSW 206
CG + L+ ++ H + G + ++ + LI +YS A +VF++ +R + W
Sbjct: 87 CGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVW 146
Query: 207 TAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGS----GALGYGRGAHC 262
A+ + L L+ M ++ + FTYT +L AC+ S L G+ H
Sbjct: 147 NALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHA 206
Query: 263 QIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQE 322
+ + G+ S++++ L+ MY++ G +D A Y+F M R+VV+W++MIA YA++G A E
Sbjct: 207 HLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFE 266
Query: 323 AISLFEEMIKQGVD--PDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCI 380
A+ F EM+++ D P++VT +S+L +C +++G++ ++ G+ L S +
Sbjct: 267 ALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISAL 326
Query: 381 VDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCS 440
V + GR G + + + M + V W SL+SS +HG I+ E +L G S
Sbjct: 327 VTMYGRCGKLEVGQRVFDRMHD-RDVVSWNSLISSYGVHGYGKKAIQIFEE--MLANGAS 383
Query: 441 ATLQQLANLYASVGWWNQVARVRKLM----KDKGLKPN 474
T ++ + V ++L +D G+KP
Sbjct: 384 PTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQ 421
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 94/225 (41%), Gaps = 11/225 (4%)
Query: 204 VSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQ 263
+S +I +E ++ + + E P+ TY L+ C +L H
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVL----SQESSPSQQTYELLILCCGHRSSLSDALRVHRH 102
Query: 264 IIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEA 323
I+ G + LI MYS G +D A +F+ R + WN++ G +E
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162
Query: 324 ISLFEEMIKQGVDPDAVTYLSLL-----SSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYS 378
+ L+ +M + GV+ D TY +L S C L+K +++ + + G + +
Sbjct: 163 LGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAH-LTRRGYSSHVYIMT 221
Query: 379 CIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVW 423
+VD+ R G + A MPV N V W ++++ +G +
Sbjct: 222 TLVDMYARFGCVDYASYVFGGMPV-RNVVSWSAMIACYAKNGKAF 265
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 138/363 (38%), Positives = 220/363 (60%), Gaps = 1/363 (0%)
Query: 152 DLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIA 211
D+ G + H I G ++VY+GSSL+ +Y++ A D+ RVF + R+ +SW +++A
Sbjct: 257 DVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVA 316
Query: 212 GFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHS 271
G+ Q R + L LF M +++KP ++S++ AC L G+ H +++ GF S
Sbjct: 317 GYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGS 376
Query: 272 YLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMI 331
+ + +AL+ MYSKCG I A IF+ M D V+W ++I G+A HG EA+SLFEEM
Sbjct: 377 NIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMK 436
Query: 332 KQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE-HGVQPKLDHYSCIVDLLGRAGLI 390
+QGV P+ V ++++L++C H GLV E YFNSM + +G+ +L+HY+ + DLLGRAG +
Sbjct: 437 RQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKL 496
Query: 391 REARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLY 450
EA +FI M V P +W +LLSS +H N+ + + AE ++ + N+Y
Sbjct: 497 EEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMY 556
Query: 451 ASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSLV 510
AS G W ++A++R M+ KGL+ P SWIE+K+K H F + D+S+ M I + +++
Sbjct: 557 ASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVM 616
Query: 511 DHM 513
+ M
Sbjct: 617 EQM 619
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 131/293 (44%), Gaps = 38/293 (12%)
Query: 158 QYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEW 217
Q H I T +++ S +IS+Y+ L +A +F+ + V++W ++I F +
Sbjct: 26 QLHAQFIRTQSLSHTS-ASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQS 84
Query: 218 RVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDN 277
L F MR S P++ + S+L +C L +G H I+++G L+ N
Sbjct: 85 LFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGN 144
Query: 278 ALIAMYSK---------------------------------CGV---IDDALYIFENMVG 301
AL+ MY+K C + ID +FE M
Sbjct: 145 ALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPR 204
Query: 302 RDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVY 361
+DVV++N++IAGYAQ G+ ++A+ + EM + PD+ T S+L V +G+
Sbjct: 205 KDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEI 264
Query: 362 FNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLS 414
++ G+ + S +VD+ ++ I ++ + C + + W SL++
Sbjct: 265 HGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRL-YCRDGISWNSLVA 316
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 139/377 (36%), Positives = 222/377 (58%), Gaps = 6/377 (1%)
Query: 141 SHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPE 200
S + SC D+ HC I G ++V+V S+LI ++++ DA VF+EM
Sbjct: 166 SSVLRSCNGMSDVR---MLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVT 222
Query: 201 RNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGA 260
+ + W +II GFAQ R D+ LELF M+ + T TS+L AC G L G A
Sbjct: 223 GDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQA 282
Query: 261 HCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLA 320
H I++ + L ++NAL+ MY KCG ++DAL +F M RDV+TW++MI+G AQ+G +
Sbjct: 283 HVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYS 340
Query: 321 QEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE-HGVQPKLDHYSC 379
QEA+ LFE M G P+ +T + +L +C H GL+++G YF SM + +G+ P +HY C
Sbjct: 341 QEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGC 400
Query: 380 IVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGC 439
++DLLG+AG + +A + M P+AV W +LL + R+ N+ + AA+ + L+P
Sbjct: 401 MIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPED 460
Query: 440 SATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRM 499
+ T L+N+YA+ W+ V +R M+D+G+K PG SWIEV ++H F D S+ ++
Sbjct: 461 AGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQI 520
Query: 500 SDILLVIDSLVDHMSSL 516
++ ++ L+ ++ +
Sbjct: 521 VEVSKKLNQLIHRLTGI 537
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 154/295 (52%), Gaps = 6/295 (2%)
Query: 120 KTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLI 179
+ M S+ L D S + C S R ++ G G +++ + LI
Sbjct: 44 RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLI 103
Query: 180 SLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYF 239
++Y + L DA+++F++MP+RNV+SWT +I+ +++ LEL LM ++PN +
Sbjct: 104 NMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVY 163
Query: 240 TYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM 299
TY+S+L +C G + R HC II+ G S + V +ALI +++K G +DAL +F+ M
Sbjct: 164 TYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM 220
Query: 300 VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQ 359
V D + WNS+I G+AQ+ + A+ LF+ M + G + T S+L +C L++ G
Sbjct: 221 VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGM 280
Query: 360 VYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLS 414
+V++ L+ + +VD+ + G + +A M + + W +++S
Sbjct: 281 QAHVHIVKYDQDLILN--NALVDMYCKCGSLEDALRVFNQMKE-RDVITWSTMIS 332
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 272 bits (696), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 144/348 (41%), Positives = 212/348 (60%), Gaps = 4/348 (1%)
Query: 171 NVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLM- 229
+V V +++I+ Y R A +F+ MP +NV SWT +I+GF+Q L++F M
Sbjct: 147 DVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCME 206
Query: 230 RGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVI 289
+ +KPN+ T S+L AC G L GR + GF ++V NA I MYSKCG+I
Sbjct: 207 KDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMI 266
Query: 290 DDALYIFENMVG-RDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSS 348
D A +FE + R++ +WNSMI A HG EA++LF +M+++G PDAVT++ LL +
Sbjct: 267 DVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLA 326
Query: 349 CRHGGLVKEGQVYFNSMVE-HGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAV 407
C HGG+V +GQ F SM E H + PKL+HY C++DLLGR G ++EA D I+ MP+ P+AV
Sbjct: 327 CVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAV 386
Query: 408 IWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMK 467
+WG+LL + HGNV I A+E+ LEP ++N+YA+ W+ V R+RKLMK
Sbjct: 387 VWGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMK 446
Query: 468 DKGLKPNPGSSW-IEVKSKVHRFEAQDKSNRRMSDILLVIDSLVDHMS 514
+ + G S+ +EV VH+F +DKS+ R +I V++ + M
Sbjct: 447 KETMTKAAGYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLEEIFRRMK 494
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 108/263 (41%), Gaps = 32/263 (12%)
Query: 191 AYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMG 250
A ++F+ + +I + + + L++L+ ++P++ T+ + +A
Sbjct: 35 ARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASAS 94
Query: 251 SGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSM 310
+ R H Q + GF S LI Y+K G + A +F+ M RDV WN+M
Sbjct: 95 FSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAM 154
Query: 311 IAGYAQHGLAQEAISLFEEMIKQG--------------------------------VDPD 338
I GY + G + A+ LF+ M ++ V P+
Sbjct: 155 ITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPN 214
Query: 339 AVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIE 398
+T +S+L +C + G ++ G+ E+G + + +++ + G+I A+ E
Sbjct: 215 HITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFE 274
Query: 399 NMPVCPNAVIWGSLLSSSRLHGN 421
+ N W S++ S HG
Sbjct: 275 ELGNQRNLCSWNSMIGSLATHGK 297
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 271 bits (694), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 134/397 (33%), Positives = 230/397 (57%)
Query: 106 NSVINHVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAIT 165
++++ N ++ S + + ++ D L +++ +DL G H +
Sbjct: 191 TAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVK 250
Query: 166 TGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLEL 225
G + SL ++Y++C A +F++M N++ W A+I+G+A+ +++
Sbjct: 251 MGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDM 310
Query: 226 FHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSK 285
FH M +++P+ + TS +SAC G+L R + + + + + + +ALI M++K
Sbjct: 311 FHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAK 370
Query: 286 CGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSL 345
CG ++ A +F+ + RDVV W++MI GY HG A+EAISL+ M + GV P+ VT+L L
Sbjct: 371 CGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGL 430
Query: 346 LSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPN 405
L +C H G+V+EG +FN M +H + P+ HY+C++DLLGRAG + +A + I+ MPV P
Sbjct: 431 LMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPG 490
Query: 406 AVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKL 465
+WG+LLS+ + H +V +G AA+ ++P + QL+NLYA+ W++VA VR
Sbjct: 491 VTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVR 550
Query: 466 MKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDI 502
MK+KGL + G SW+EV+ ++ F DKS+ R +I
Sbjct: 551 MKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEI 587
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 154/287 (53%), Gaps = 3/287 (1%)
Query: 136 DVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVF 195
D H + +C L G H GF A+V+V + LI+LY++C G A VF
Sbjct: 118 DSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVF 177
Query: 196 E--EMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGA 253
E +PER +VSWTAI++ +AQ LE+F MR ++KP++ S+L+A
Sbjct: 178 EGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQD 237
Query: 254 LGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAG 313
L GR H +++MG + +L MY+KCG + A +F+ M +++ WN+MI+G
Sbjct: 238 LKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISG 297
Query: 314 YAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPK 373
YA++G A+EAI +F EMI + V PD ++ S +S+C G +++ + + + +
Sbjct: 298 YAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDD 357
Query: 374 LDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHG 420
+ S ++D+ + G + AR + + + + V+W +++ LHG
Sbjct: 358 VFISSALIDMFAKCGSVEGAR-LVFDRTLDRDVVVWSAMIVGYGLHG 403
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 145/284 (51%), Gaps = 6/284 (2%)
Query: 139 FLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEM 198
F + + S K L Q H + G + ++ + LI S A +VF+++
Sbjct: 23 FYASLIDSATHKAQLK---QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDL 79
Query: 199 PERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGR 258
P + W AII G+++ L ++ M+ + + P+ FT+ LL AC G L GR
Sbjct: 80 PRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGR 139
Query: 259 GAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFEN--MVGRDVVTWNSMIAGYAQ 316
H Q+ ++GF + + V N LIA+Y+KC + A +FE + R +V+W ++++ YAQ
Sbjct: 140 FVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQ 199
Query: 317 HGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDH 376
+G EA+ +F +M K V PD V +S+L++ +K+G+ S+V+ G++ + D
Sbjct: 200 NGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDL 259
Query: 377 YSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHG 420
+ + + G + A+ + M PN ++W +++S +G
Sbjct: 260 LISLNTMYAKCGQVATAKILFDKMK-SPNLILWNAMISGYAKNG 302
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 271 bits (694), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 133/342 (38%), Positives = 211/342 (61%), Gaps = 1/342 (0%)
Query: 176 SSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMK 235
++L+S Y G+A +F+EM E+N++SW +I+G A+ + L+LF M+ +
Sbjct: 355 NALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFE 414
Query: 236 PNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYI 295
P + ++ + +C GA G+ H Q++++GF S L NALI MY+KCGV+++A +
Sbjct: 415 PCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQV 474
Query: 296 FENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLV 355
F M D V+WN++IA QHG EA+ ++EEM+K+G+ PD +T L++L++C H GLV
Sbjct: 475 FRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLV 534
Query: 356 KEGQVYFNSM-VEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLS 414
+G+ YF+SM + + P DHY+ ++DLL R+G +A IE++P P A IW +LLS
Sbjct: 535 DQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLS 594
Query: 415 SSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPN 474
R+HGN+ +GI AA+ L P T L+N++A+ G W +VARVRKLM+D+G+K
Sbjct: 595 GCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKE 654
Query: 475 PGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSLVDHMSSL 516
SWIE++++VH F D S+ + + + L M L
Sbjct: 655 VACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRL 696
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 158/344 (45%), Gaps = 69/344 (20%)
Query: 157 VQYHCLAITTGFIANVYVGSSLISLYSRCALSGD----AYRVFEEMPERNVVSWTAIIAG 212
VQ+H A+ +G V ++L+S+YS+CA S A +VF+E+ E++ SWT ++ G
Sbjct: 169 VQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTG 228
Query: 213 FAQEWRVDM--------------------------------CLELFHLMRGSEMKPNYFT 240
+ + D+ LE+ M S ++ + FT
Sbjct: 229 YVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFT 288
Query: 241 YTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMV 300
Y S++ AC +G L G+ H +++ S+ H DN+L+++Y KCG D+A IFE M
Sbjct: 289 YPSVIRACATAGLLQLGKQVHAYVLRREDFSF-HFDNSLVSLYYKCGKFDEARAIFEKMP 347
Query: 301 GRDVVTWNSMIAGY-------------------------------AQHGLAQEAISLFEE 329
+D+V+WN++++GY A++G +E + LF
Sbjct: 348 AKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSC 407
Query: 330 MIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGL 389
M ++G +P + + SC G GQ Y +++ G L + ++ + + G+
Sbjct: 408 MKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGV 467
Query: 390 IREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRL 433
+ EAR MP C ++V W +L+++ HG+ ++ E L
Sbjct: 468 VEEARQVFRTMP-CLDSVSWNALIAALGQHGHGAEAVDVYEEML 510
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 153/345 (44%), Gaps = 60/345 (17%)
Query: 176 SSLISLYSRCALSGD---AYRVFEEMP--ERNVVSWTAIIAGFAQEWRVDMCLELFHLMR 230
++++S Y CA SGD A VFE+ P R+ V + A+I GF+ + LF M+
Sbjct: 84 TTMVSGY--CA-SGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMK 140
Query: 231 GSEMKPNYFTYTSLLSA-CMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCG-- 287
KP+ FT+ S+L+ + + H ++ G V NAL+++YSKC
Sbjct: 141 HEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASS 200
Query: 288 --VIDDALYIFENMVGRD--------------------------------VVTWNSMIAG 313
++ A +F+ ++ +D +V +N+MI+G
Sbjct: 201 PSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISG 260
Query: 314 YAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEG-QVYFNSMVEHGVQP 372
Y G QEA+ + M+ G++ D TY S++ +C GL++ G QV+ +
Sbjct: 261 YVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSF 320
Query: 373 KLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESR 432
D + +V L + G EAR E MP + V W +LLS G++ E++
Sbjct: 321 HFD--NSLVSLYYKCGKFDEARAIFEKMPA-KDLVSWNALLSGYVSSGHI------GEAK 371
Query: 433 LLL----EPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKP 473
L+ E + + ++ L A G+ + ++ MK +G +P
Sbjct: 372 LIFKEMKEKNILSWMIMISGL-AENGFGEEGLKLFSCMKREGFEP 415
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 13/203 (6%)
Query: 124 EMSSVMEQELGVDVC--FLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISL 181
++ S M++E G + C S A+ SC G QYH + GF +++ G++LI++
Sbjct: 403 KLFSCMKRE-GFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITM 461
Query: 182 YSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTY 241
Y++C + +A +VF MP + VSW A+IA Q ++++ M ++P+ T
Sbjct: 462 YAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITL 521
Query: 242 TSLLSACMGSGALGYGRGAHCQI-----IQMGFHSYLHVDNALIAMYSKCGVIDDALYIF 296
++L+AC +G + GR + I G Y LI + + G DA +
Sbjct: 522 LTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYAR----LIDLLCRSGKFSDAESVI 577
Query: 297 ENMVGRDVV-TWNSMIAGYAQHG 318
E++ + W ++++G HG
Sbjct: 578 ESLPFKPTAEIWEALLSGCRVHG 600
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 270 bits (689), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 141/389 (36%), Positives = 228/389 (58%)
Query: 125 MSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSR 184
+ +M L D L A SC + G HCL++ TG+ A+V+VGSSL+ +Y++
Sbjct: 104 LKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAK 163
Query: 185 CALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSL 244
C A ++F+EMP+RNVV+W+ ++ G+AQ + L LF + N ++++S+
Sbjct: 164 CGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSV 223
Query: 245 LSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDV 304
+S C S L GR H I+ F S V ++L+++YSKCGV + A +F + +++
Sbjct: 224 ISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNL 283
Query: 305 VTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNS 364
WN+M+ YAQH Q+ I LF+ M G+ P+ +T+L++L++C H GLV EG+ YF+
Sbjct: 284 GIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQ 343
Query: 365 MVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWI 424
M E ++P HY+ +VD+LGRAG ++EA + I NMP+ P +WG+LL+S +H N +
Sbjct: 344 MKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTEL 403
Query: 425 GIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKS 484
AA+ L P S L+N YA+ G + A+ RKL++D+G K G SW+E ++
Sbjct: 404 AAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERN 463
Query: 485 KVHRFEAQDKSNRRMSDILLVIDSLVDHM 513
KVH F A ++ + + +I + L + M
Sbjct: 464 KVHTFAAGERRHEKSKEIYEKLAELGEEM 492
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 140/282 (49%), Gaps = 1/282 (0%)
Query: 146 SCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVS 205
S R G+Q H + +G V ++LI+ YS+ L D+ R FE+ P+++ +
Sbjct: 24 SSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTT 83
Query: 206 WTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQII 265
W++II+ FAQ M LE M ++P+ S +C GR HC +
Sbjct: 84 WSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSM 143
Query: 266 QMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAIS 325
+ G+ + + V ++L+ MY+KCG I A +F+ M R+VVTW+ M+ GYAQ G +EA+
Sbjct: 144 KTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALW 203
Query: 326 LFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLG 385
LF+E + + + + ++ S++S C + L++ G+ ++ S +V L
Sbjct: 204 LFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYS 263
Query: 386 RAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIE 427
+ G+ A +PV N IW ++L + H + IE
Sbjct: 264 KCGVPEGAYQVFNEVPV-KNLGIWNAMLKAYAQHSHTQKVIE 304
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 268 bits (686), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 162/436 (37%), Positives = 239/436 (54%), Gaps = 39/436 (8%)
Query: 125 MSSVMEQELGVDVCF-LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYS 183
M M +E V F S + +CG+ +DLN G Q+H VYVG+++I +Y
Sbjct: 136 MYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYV 195
Query: 184 RCALSGDAYRVFEEMPERNVVSWTAIIA-------------------------------G 212
+C A +VF+EMPER+V+SWT +IA G
Sbjct: 196 KCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTG 255
Query: 213 FAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHS- 271
FAQ + LE F M S ++ + T +SAC GA Y A QI Q +S
Sbjct: 256 FAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRA-VQIAQKSGYSP 314
Query: 272 --YLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEE 329
++ + +ALI MYSKCG +++A+ +F +M ++V T++SMI G A HG AQEA+ LF
Sbjct: 315 SDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHY 374
Query: 330 MIKQG-VDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE-HGVQPKLDHYSCIVDLLGRA 387
M+ Q + P+ VT++ L +C H GLV +G+ F+SM + GVQP DHY+C+VDLLGR
Sbjct: 375 MVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRT 434
Query: 388 GLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLA 447
G ++EA + I+ M V P+ +WG+LL + R+H N I AAE LEP L+
Sbjct: 435 GRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLS 494
Query: 448 NLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKS-KVHRFEAQDKSNRRMSDILLVI 506
N+YAS G W V RVRKL+K+KGLK P SW+ K+ ++H+F + ++ + I +
Sbjct: 495 NVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKL 554
Query: 507 DSLVDHMSSLSLQSHM 522
+ LV+ ++ L Q +
Sbjct: 555 EELVERLTVLGYQPDL 570
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 140/317 (44%), Gaps = 42/317 (13%)
Query: 144 VSSCGSKRD----LNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAY--RVFEE 197
VSS SK D LN Q H + G + Y+ + LI ++ + D Y RV E
Sbjct: 49 VSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEP 108
Query: 198 MPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYG 257
+ RN WTA+I G+A E + D + ++ MR E+ P FT+++LL AC L G
Sbjct: 109 VQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLG 168
Query: 258 RGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIA----- 312
R H Q ++ +++V N +I MY KC ID A +F+ M RDV++W +IA
Sbjct: 169 RQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARV 228
Query: 313 --------------------------GYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLL 346
G+AQ+ QEA+ F+ M K G+ D VT +
Sbjct: 229 GNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYI 288
Query: 347 SSCRHGGLVKEGQVYFNSMVEHGVQPKLDHY---SCIVDLLGRAGLIREARDFIENMPVC 403
S+C G K + G P DH S ++D+ + G + EA + +M
Sbjct: 289 SACAQLGASKYADRAVQIAQKSGYSPS-DHVVIGSALIDMYSKCGNVEEAVNVFMSMN-N 346
Query: 404 PNAVIWGSLLSSSRLHG 420
N + S++ HG
Sbjct: 347 KNVFTYSSMILGLATHG 363
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 129/360 (35%), Positives = 219/360 (60%), Gaps = 2/360 (0%)
Query: 153 LNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAG 212
L G Q HC A+ + ++VG+SL+ +Y++C + +A +F+ +P+R VSWTA+I+G
Sbjct: 367 LQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISG 426
Query: 213 FAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSY 272
+ Q+ L+LF MRGS ++ + T+ ++L A +L G+ H II+ G
Sbjct: 427 YVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLEN 486
Query: 273 LHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIK 332
+ + L+ MY+KCG I DA+ +FE M R+ V+WN++I+ +A +G + AI F +MI+
Sbjct: 487 VFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIE 546
Query: 333 QGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE-HGVQPKLDHYSCIVDLLGRAGLIR 391
G+ PD+V+ L +L++C H G V++G YF +M +G+ PK HY+C++DLLGR G
Sbjct: 547 SGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFA 606
Query: 392 EARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEP-GCSATLQQLANLY 450
EA ++ MP P+ ++W S+L++ R+H N + AAE +E +A ++N+Y
Sbjct: 607 EAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIY 666
Query: 451 ASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSLV 510
A+ G W +V V+K M+++G+K P SW+EV K+H F + D+++ +I+ I+ L
Sbjct: 667 AAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELT 726
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 141/277 (50%), Gaps = 1/277 (0%)
Query: 152 DLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIA 211
D G Q H L++TTGF + VG+ ++ YS+ + +F+EMPE + VS+ +I+
Sbjct: 265 DFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVIS 324
Query: 212 GFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHS 271
++Q + + L F M+ F + ++LS +L GR HCQ + S
Sbjct: 325 SYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADS 384
Query: 272 YLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMI 331
LHV N+L+ MY+KC + ++A IF+++ R V+W ++I+GY Q GL + LF +M
Sbjct: 385 ILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMR 444
Query: 332 KQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIR 391
+ D T+ ++L + + G+ ++ G + S +VD+ + G I+
Sbjct: 445 GSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIK 504
Query: 392 EARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEA 428
+A E MP NAV W +L+S+ +G+ I A
Sbjct: 505 DAVQVFEEMPD-RNAVSWNALISAHADNGDGEAAIGA 540
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 131/292 (44%), Gaps = 8/292 (2%)
Query: 147 CGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALS--GDAYRVFEEMPERNVV 204
C N Q H A+ GF N ++ S + L S C + A +FEE+PE++ V
Sbjct: 157 CNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSV 216
Query: 205 SWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQI 264
++ +I G+ ++ + LF MR S +P+ FT++ +L A +G G+ H
Sbjct: 217 TFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALS 276
Query: 265 IQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAI 324
+ GF V N ++ YSK + + +F+ M D V++N +I+ Y+Q + ++
Sbjct: 277 VTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASL 336
Query: 325 SLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLL 384
F EM G D + ++LS + ++ G+ + L + +VD+
Sbjct: 337 HFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMY 396
Query: 385 GRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLE 436
+ + EA +++P V W +L+S G V G+ A +L +
Sbjct: 397 AKCEMFEEAELIFKSLPQ-RTTVSWTALIS-----GYVQKGLHGAGLKLFTK 442
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 110/235 (46%), Gaps = 4/235 (1%)
Query: 171 NVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLM- 229
N +++IS + + A +F+ MP+R VV+WT ++ +A+ D +LF M
Sbjct: 78 NTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMC 137
Query: 230 RGSEMK-PNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHS--YLHVDNALIAMYSKC 286
R S P++ T+T+LL C + H +++GF + +L V N L+ Y +
Sbjct: 138 RSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEV 197
Query: 287 GVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLL 346
+D A +FE + +D VT+N++I GY + GL E+I LF +M + G P T+ +L
Sbjct: 198 RRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVL 257
Query: 347 SSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMP 401
+ GQ V G + I+D + + E R + MP
Sbjct: 258 KAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP 312
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 160/511 (31%), Positives = 265/511 (51%), Gaps = 20/511 (3%)
Query: 34 HSWIQLLFTRNPTFCLT--NQFFRPFSSQKLPPRRANKELANALRILNLVSPKKSASDIE 91
HS I + T+NP ++ N Q + ++++ +++N + + S +
Sbjct: 21 HSKIDTVNTQNPILLISKCNSLRELMQIQAYAIKSHIEDVSFVAKLINFCTESPTESSMS 80
Query: 92 NRRSHLRLIEDMLENSVI--NHVGSNLATLKTTTEMSS----VMEQELGVDVCFLSHAVS 145
R L E M E ++ N + + E+ S ++E + D +
Sbjct: 81 YAR---HLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLK 137
Query: 146 SCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVS 205
+C + L G Q HCL++ G NVYV +LI++Y+ C A VF+ + E VV
Sbjct: 138 ACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVC 197
Query: 206 WTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQII 265
+ A+I G+A+ R + L LF M+G +KPN T S+LS+C G+L G+ H
Sbjct: 198 YNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAK 257
Query: 266 QMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAIS 325
+ F Y+ V+ ALI M++KCG +DDA+ IFE M +D W++MI YA HG A++++
Sbjct: 258 KHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSML 317
Query: 326 LFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMV-EHGVQPKLDHYSCIVDLL 384
+FE M + V PD +T+L LL++C H G V+EG+ YF+ MV + G+ P + HY +VDLL
Sbjct: 318 MFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLL 377
Query: 385 GRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQ 444
RAG + +A +FI+ +P+ P ++W LL++ H N+ + + +E L+
Sbjct: 378 SRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYV 437
Query: 445 QLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDILL 504
L+NLYA W V +RK+MKD+ PG S IEV + VH F + D + +
Sbjct: 438 ILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHR 497
Query: 505 VIDSLVDHM--------SSLSLQSHMYEEEN 527
+D +V + +S+ + ++M ++E
Sbjct: 498 ALDEMVKELKLSGYVPDTSMVVHANMNDQEK 528
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/364 (36%), Positives = 221/364 (60%), Gaps = 2/364 (0%)
Query: 158 QYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEW 217
+ H + T + + VG++L+ Y + +A +VF + ++++V+W+A++AG+AQ
Sbjct: 414 EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTG 473
Query: 218 RVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGA-LGYGRGAHCQIIQMGFHSYLHVD 276
+ +++F + +KPN FT++S+L+ C + A +G G+ H I+ S L V
Sbjct: 474 ETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVS 533
Query: 277 NALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVD 336
+AL+ MY+K G I+ A +F+ +D+V+WNSMI+GYAQHG A +A+ +F+EM K+ V
Sbjct: 534 SALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVK 593
Query: 337 PDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEH-GVQPKLDHYSCIVDLLGRAGLIREARD 395
D VT++ + ++C H GLV+EG+ YF+ MV + P +H SC+VDL RAG + +A
Sbjct: 594 MDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMK 653
Query: 396 FIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGW 455
IENMP + IW ++L++ R+H +G AAE + ++P SA L+N+YA G
Sbjct: 654 VIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGD 713
Query: 456 WNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSLVDHMSS 515
W + A+VRKLM ++ +K PG SWIEVK+K + F A D+S+ I + ++ L +
Sbjct: 714 WQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKD 773
Query: 516 LSLQ 519
L +
Sbjct: 774 LGYE 777
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 135/259 (52%)
Query: 156 GVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQ 215
G Q HC I GF+ +V VG+SL+ Y + + D +VF+EM ERNVV+WT +I+G+A+
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYAR 171
Query: 216 EWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHV 275
D L LF M+ +PN FT+ + L G G G H +++ G + V
Sbjct: 172 NSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPV 231
Query: 276 DNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGV 335
N+LI +Y KCG + A +F+ + VVTWNSMI+GYA +GL EA+ +F M V
Sbjct: 232 SNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYV 291
Query: 336 DPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARD 395
++ S++ C + ++ + S+V++G + + ++ + + +A
Sbjct: 292 RLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALR 351
Query: 396 FIENMPVCPNAVIWGSLLS 414
+ + N V W +++S
Sbjct: 352 LFKEIGCVGNVVSWTAMIS 370
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 149/290 (51%), Gaps = 7/290 (2%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP 199
+ + C + ++L Q HC + GF+ + + ++L+ YS+C DA R+F+E+
Sbjct: 298 FASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIG 357
Query: 200 -ERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGR 258
NVVSWTA+I+GF Q + ++LF M+ ++PN FTY+ +L+A +
Sbjct: 358 CVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTAL----PVISPS 413
Query: 259 GAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHG 318
H Q+++ + V AL+ Y K G +++A +F + +D+V W++M+AGYAQ G
Sbjct: 414 EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTG 473
Query: 319 LAQEAISLFEEMIKQGVDPDAVTYLSLLSSC-RHGGLVKEGQVYFNSMVEHGVQPKLDHY 377
+ AI +F E+ K G+ P+ T+ S+L+ C + +G+ + ++ + L
Sbjct: 474 ETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVS 533
Query: 378 SCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIE 427
S ++ + + G I A + + + V W S++S HG ++
Sbjct: 534 SALLTMYAKKGNIESAEEVFKRQRE-KDLVSWNSMISGYAQHGQAMKALD 582
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 122/233 (52%), Gaps = 5/233 (2%)
Query: 190 DAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELF-HLMR-GSEMKPNYFTYTSLLSA 247
+A+ +F++ P R+ S+ +++ GF+++ R LF ++ R G EM + F+ +SA
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSA 104
Query: 248 CMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTW 307
+ +GR HCQ I+ GF + V +L+ Y K D +F+ M R+VVTW
Sbjct: 105 TLCDEL--FGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162
Query: 308 NSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE 367
++I+GYA++ + E ++LF M +G P++ T+ + L G+ G +V+
Sbjct: 163 TTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 222
Query: 368 HGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHG 420
+G+ + + +++L + G +R+AR + V + V W S++S +G
Sbjct: 223 NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEV-KSVVTWNSMISGYAANG 274
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 87/169 (51%), Gaps = 12/169 (7%)
Query: 156 GVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQ 215
G Q+H AI + +++ V S+L+++Y++ A VF+ E+++VSW ++I+G+AQ
Sbjct: 514 GKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQ 573
Query: 216 EWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRG------AHCQIIQMGF 269
+ L++F M+ ++K + T+ + +AC +G + G C+I
Sbjct: 574 HGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKE 633
Query: 270 HSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVT-WNSMIAGYAQH 317
H+ VD +YS+ G ++ A+ + ENM T W +++A H
Sbjct: 634 HNSCMVD-----LYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVH 677
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 265 bits (678), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 139/367 (37%), Positives = 213/367 (58%), Gaps = 5/367 (1%)
Query: 141 SHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPE 200
S A+ C DL GG+Q H + GF+++ + ++L+ LYS C S DA +VF+E+P+
Sbjct: 117 SFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPK 176
Query: 201 RNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSE---MKPNYFTYTSLLSACMGSGALGYG 257
R+ VSW + + + + R L LF M+ +KP+ T L AC GAL +G
Sbjct: 177 RDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFG 236
Query: 258 RGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQH 317
+ H I + G L++ N L++MYS+CG +D A +F M R+VV+W ++I+G A +
Sbjct: 237 KQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMN 296
Query: 318 GLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMV--EHGVQPKLD 375
G +EAI F EM+K G+ P+ T LLS+C H GLV EG ++F+ M E ++P L
Sbjct: 297 GFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLH 356
Query: 376 HYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLL 435
HY C+VDLLGRA L+ +A I++M + P++ IW +LL + R+HG+V +G + L
Sbjct: 357 HYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIEL 416
Query: 436 EPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKS 495
+ + L N Y++VG W +V +R LMK+K + PG S IE++ VH F D S
Sbjct: 417 KAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVS 476
Query: 496 NRRMSDI 502
+ R +I
Sbjct: 477 HPRKEEI 483
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 137/311 (44%), Gaps = 12/311 (3%)
Query: 158 QYHCLAITTGFIANVYVGSSLISLYSRCALSGD---AYRVFEEMPERNVVSWTAIIAGFA 214
Q H L + T I N V +S + + D + RVF + + +I F+
Sbjct: 29 QIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLNPTLSHCNTMIRAFS 88
Query: 215 QEWRVDMCLELFH-LMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYL 273
LF L R S + N + + L C+ SG L G H +I GF S
Sbjct: 89 LSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDS 148
Query: 274 HVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEM--- 330
+ L+ +YS C DA +F+ + RD V+WN + + Y ++ ++ + LF++M
Sbjct: 149 LLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKND 208
Query: 331 IKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLI 390
+ V PD VT L L +C + G + G+ + + E+G+ L+ + +V + R G +
Sbjct: 209 VDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSM 268
Query: 391 REARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAES-RLLLEPGCSATLQQLANL 449
+A M N V W +L+S ++G G EA E+ +L+ G S Q L L
Sbjct: 269 DKAYQVFYGMRE-RNVVSWTALISGLAMNG---FGKEAIEAFNEMLKFGISPEEQTLTGL 324
Query: 450 YASVGWWNQVA 460
++ VA
Sbjct: 325 LSACSHSGLVA 335
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 265 bits (677), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 146/406 (35%), Positives = 228/406 (56%), Gaps = 7/406 (1%)
Query: 110 NHVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFI 169
H+G + LK +M ++E C ++ AV + S + G Q H I GF
Sbjct: 189 THLGDGIGGLKMYKQM--LLENAEVTPYC-ITIAVRASASIDSVTTGKQIHASVIKRGFQ 245
Query: 170 ANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLM 229
+N+ V +S++ LY RC +A F EM ++++++W +I+ + + L +F
Sbjct: 246 SNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDSSEALL-MFQRF 304
Query: 230 RGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVI 289
PN +T+TSL++AC AL G+ H +I + GF+ + + NALI MY+KCG I
Sbjct: 305 ESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNI 364
Query: 290 DDALYIFENMVGR-DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSS 348
D+ +F +V R ++V+W SM+ GY HG EA+ LF++M+ G+ PD + ++++LS+
Sbjct: 365 PDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSA 424
Query: 349 CRHGGLVKEGQVYFNSM-VEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAV 407
CRH GLV++G YFN M E+G+ P D Y+C+VDLLGRAG I EA + +E MP P+
Sbjct: 425 CRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDES 484
Query: 408 IWGSLLSSSRLHG-NVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLM 466
WG++L + + H N I AA + L+P T L+ +YA+ G W ARVRK+M
Sbjct: 485 TWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMM 544
Query: 467 KDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSLVDH 512
+ G K G SWI V+++V F DK S + V+ L++
Sbjct: 545 RMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLLIEE 590
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 127/244 (52%), Gaps = 6/244 (2%)
Query: 174 VGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSE 233
+ ++LI Y L +A +F+EMP+R+VV+WTA+I G+A E FH M
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQG 106
Query: 234 MKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGV-IDDA 292
PN FT +S+L +C L YG H ++++G L+VDNA++ MY+ C V ++ A
Sbjct: 107 TSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAA 166
Query: 293 LYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQG--VDPDAVTYLSLLSSCR 350
IF ++ ++ VTW ++I G+ G + ++++M+ + V P +T S+
Sbjct: 167 CLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASI 226
Query: 351 HGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWG 410
V G+ S+++ G Q L + I+DL R G + EA+ + M + + W
Sbjct: 227 DS--VTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMED-KDLITWN 283
Query: 411 SLLS 414
+L+S
Sbjct: 284 TLIS 287
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 150/294 (51%), Gaps = 9/294 (3%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAY-RVFEEM 198
LS + SC + + L G H + + G ++YV ++++++Y+ C+++ +A +F ++
Sbjct: 114 LSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDI 173
Query: 199 PERNVVSWTAIIAGFAQEWRVDMCLELFH--LMRGSEMKPNYFTYTSLLSACMGSGALGY 256
+N V+WT +I GF L+++ L+ +E+ P T SA + S +
Sbjct: 174 KVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDS--VTT 231
Query: 257 GRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQ 316
G+ H +I+ GF S L V N+++ +Y +CG + +A + F M +D++TWN++I+ +
Sbjct: 232 GKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISEL-E 290
Query: 317 HGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDH 376
+ EA+ +F+ QG P+ T+ SL+++C + + GQ + G ++
Sbjct: 291 RSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVEL 350
Query: 377 YSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAE 430
+ ++D+ + G I +++ + N V W S++ HG G EA E
Sbjct: 351 ANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHG---YGAEAVE 401
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%)
Query: 279 LIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPD 338
LI Y + G++++A +F+ M RDVV W +MI GYA A F EM+KQG P+
Sbjct: 51 LIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPN 110
Query: 339 AVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIE 398
T S+L SCR+ ++ G + +V+ G++ L + ++++ + EA I
Sbjct: 111 EFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIF 170
Query: 399 NMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLL 434
N V W +L++ G+ G++ + LL
Sbjct: 171 RDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLL 206
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 144/364 (39%), Positives = 215/364 (59%), Gaps = 2/364 (0%)
Query: 128 VMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCAL 187
++ +E D+ + +SC + L G H AI G ++ ++ IS+YS+
Sbjct: 247 MLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSED 306
Query: 188 SGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSA 247
+ A +F+ M R VSWT +I+G+A++ +D L LFH M S KP+ T SL+S
Sbjct: 307 TCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISG 366
Query: 248 CMGSGALGYGRGAHCQIIQMGF-HSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVT 306
C G+L G+ + G + + NALI MYSKCG I +A IF+N + VVT
Sbjct: 367 CGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVT 426
Query: 307 WNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMV 366
W +MIAGYA +G+ EA+ LF +MI P+ +T+L++L +C H G +++G YF+ M
Sbjct: 427 WTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMK 486
Query: 367 E-HGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIG 425
+ + + P LDHYSC+VDLLGR G + EA + I NM P+A IWG+LL++ ++H NV I
Sbjct: 487 QVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIA 546
Query: 426 IEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSK 485
+AAES LEP +A ++AN+YA+ G W+ AR+R +MK + +K PG S I+V K
Sbjct: 547 EQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGK 606
Query: 486 VHRF 489
H F
Sbjct: 607 NHSF 610
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 128/273 (46%), Gaps = 22/273 (8%)
Query: 160 HCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP--ERNVVSWTAIIAGFAQEW 217
H + I G V V ++ IS Y +C A VFE + +R VVSW ++ ++
Sbjct: 176 HAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFG 235
Query: 218 RVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDN 277
L+ LM E KP+ T+ +L ++C L GR H I +G + N
Sbjct: 236 EAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAIN 295
Query: 278 ALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDP 337
I+MYSK A +F+ M R V+W MI+GYA+ G EA++LF MIK G P
Sbjct: 296 TFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKP 355
Query: 338 DAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSC----------IVDLLGRA 387
D VT LSL+S C G ++ G+ + + D Y C ++D+ +
Sbjct: 356 DLVTLLSLISGCGKFGSLETGK---------WIDARADIYGCKRDNVMICNALIDMYSKC 406
Query: 388 GLIREARDFIENMPVCPNAVIWGSLLSSSRLHG 420
G I EARD +N P V W ++++ L+G
Sbjct: 407 GSIHEARDIFDNTPE-KTVVTWTTMIAGYALNG 438
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 137/279 (49%), Gaps = 3/279 (1%)
Query: 146 SCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVS 205
+C D+ H I + F ++V+VG++ + ++ +C A +VFE MPER+ +
Sbjct: 61 ACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATT 120
Query: 206 WTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQII 265
W A+++GF Q D LF MR +E+ P+ T +L+ + +L H I
Sbjct: 121 WNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGI 180
Query: 266 QMGFHSYLHVDNALIAMYSKCGVIDDALYIFE--NMVGRDVVTWNSMIAGYAQHGLAQEA 323
++G + V N I+ Y KCG +D A +FE + R VV+WNSM Y+ G A +A
Sbjct: 181 RLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDA 240
Query: 324 ISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDL 383
L+ M+++ PD T+++L +SC++ + +G++ + + G ++ + + +
Sbjct: 241 FGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISM 300
Query: 384 LGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNV 422
++ AR + M V W ++S G++
Sbjct: 301 YSKSEDTCSARLLFDIM-TSRTCVSWTVMISGYAEKGDM 338
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 95/202 (47%), Gaps = 1/202 (0%)
Query: 223 LELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAM 282
L LF M+ +PN FT+ + AC +G H +I+ F S + V A + M
Sbjct: 37 LLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDM 96
Query: 283 YSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTY 342
+ KC +D A +FE M RD TWN+M++G+ Q G +A SLF EM + PD+VT
Sbjct: 97 FVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTV 156
Query: 343 LSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPV 402
++L+ S +K + + GV ++ + + G+ G + A+ E +
Sbjct: 157 MTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDR 216
Query: 403 CPNAVI-WGSLLSSSRLHGNVW 423
V+ W S+ + + G +
Sbjct: 217 GDRTVVSWNSMFKAYSVFGEAF 238
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 141/364 (38%), Positives = 218/364 (59%), Gaps = 4/364 (1%)
Query: 153 LNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPER-NVVSWTAIIA 211
L+ G+Q H I GF+A++ V +SL+++Y+ C+ + +FE+ + VSW I+
Sbjct: 387 LSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILT 446
Query: 212 GFAQ-EWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFH 270
Q E V+M L LF LM SE +P++ T +LL C+ +L G HC ++ G
Sbjct: 447 ACLQHEQPVEM-LRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLA 505
Query: 271 SYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEM 330
+ N LI MY+KCG + A IF++M RDVV+W+++I GYAQ G +EA+ LF+EM
Sbjct: 506 PEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEM 565
Query: 331 IKQGVDPDAVTYLSLLSSCRHGGLVKEG-QVYFNSMVEHGVQPKLDHYSCIVDLLGRAGL 389
G++P+ VT++ +L++C H GLV+EG ++Y EHG+ P +H SC+VDLL RAG
Sbjct: 566 KSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGR 625
Query: 390 IREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANL 449
+ EA FI+ M + P+ V+W +LLS+ + GNV + +AAE+ L ++P S L ++
Sbjct: 626 LNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSM 685
Query: 450 YASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSL 509
+AS G W A +R MK +K PG SWIE++ K+H F A+D + DI V+ ++
Sbjct: 686 HASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNI 745
Query: 510 VDHM 513
M
Sbjct: 746 WSQM 749
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 140/272 (51%), Gaps = 2/272 (0%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV 203
+ +C S R L G + H + + + + + ++S+Y +C DA VF+ MPERN+
Sbjct: 74 ICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNL 133
Query: 204 VSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQ 263
VS+T++I G++Q + + L+ M ++ P+ F + S++ AC S +G G+ H Q
Sbjct: 134 VSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQ 193
Query: 264 IIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEA 323
+I++ S+L NALIAMY + + DA +F + +D+++W+S+IAG++Q G EA
Sbjct: 194 VIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEA 253
Query: 324 ISLFEEMIKQGV-DPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVD 382
+S +EM+ GV P+ + S L +C G ++ + + D
Sbjct: 254 LSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCD 313
Query: 383 LLGRAGLIREARDFIENMPVCPNAVIWGSLLS 414
+ R G + AR + + P+ W +++
Sbjct: 314 MYARCGFLNSARRVFDQIER-PDTASWNVIIA 344
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 130/272 (47%), Gaps = 2/272 (0%)
Query: 143 AVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERN 202
++ +C S + G Q H L I + N G SL +Y+RC A RVF+++ +
Sbjct: 276 SLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPD 335
Query: 203 VVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHC 262
SW IIAG A D + +F MR S P+ + SLL A AL G H
Sbjct: 336 TASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHS 395
Query: 263 QIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGR-DVVTWNSMIAGYAQHGLAQ 321
II+ GF + L V N+L+ MY+ C + +FE+ D V+WN+++ QH
Sbjct: 396 YIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPV 455
Query: 322 EAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIV 381
E + LF+ M+ +PD +T +LL C +K G ++ G+ P+ + ++
Sbjct: 456 EMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLI 515
Query: 382 DLLGRAGLIREARDFIENMPVCPNAVIWGSLL 413
D+ + G + +AR ++M + V W +L+
Sbjct: 516 DMYAKCGSLGQARRIFDSMDN-RDVVSWSTLI 546
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 140/293 (47%), Gaps = 1/293 (0%)
Query: 128 VMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCAL 187
+++++L D + +C S D+ G Q H I +++ ++LI++Y R
Sbjct: 159 MLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQ 218
Query: 188 SGDAYRVFEEMPERNVVSWTAIIAGFAQ-EWRVDMCLELFHLMRGSEMKPNYFTYTSLLS 246
DA RVF +P ++++SW++IIAGF+Q + + L ++ PN + + S L
Sbjct: 219 MSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLK 278
Query: 247 ACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVT 306
AC YG H I+ +L MY++CG ++ A +F+ + D +
Sbjct: 279 ACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTAS 338
Query: 307 WNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMV 366
WN +IAG A +G A EA+S+F +M G PDA++ SLL + + +G + ++
Sbjct: 339 WNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYII 398
Query: 367 EHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLH 419
+ G L + ++ + + + E+ ++V W ++L++ H
Sbjct: 399 KWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQH 451
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 114/228 (50%), Gaps = 5/228 (2%)
Query: 147 CGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSW 206
C L G Q HC ++ TG ++ + LI +Y++C G A R+F+ M R+VVSW
Sbjct: 483 CVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSW 542
Query: 207 TAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQI-I 265
+ +I G+AQ + L LF M+ + ++PN+ T+ +L+AC G + G + +
Sbjct: 543 STLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQT 602
Query: 266 QMGFHSYLHVDNALIAMYSKCGVIDDA-LYIFENMVGRDVVTWNSMIAGYAQHGLAQEAI 324
+ G + ++ + ++ G +++A +I E + DVV W ++++ G A
Sbjct: 603 EHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQ 662
Query: 325 SLFEEMIKQGVDP-DAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQ 371
E ++K +DP ++ ++ L S G + + +SM +H V+
Sbjct: 663 KAAENILK--IDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVK 708
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 129/286 (45%), Gaps = 55/286 (19%)
Query: 223 LELFHL-MRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIA 281
LE F + S K TY SL+ AC S +L GR H I+ ++N +++
Sbjct: 51 LEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILS 110
Query: 282 MYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVT 341
MY KCG + DA +F+ M R++V++ S+I GY+Q+G EAI L+ +M+++ + PD
Sbjct: 111 MYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFA 170
Query: 342 YLSLLSSCRHGGLVKEGQ-------------------------VYFNSM-----VEHGVQ 371
+ S++ +C V G+ V FN M V +G+
Sbjct: 171 FGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIP 230
Query: 372 PK-LDHYSCIVDLLGRAGLIREARDFIENM----PVCPNAVIWGSLLSS----------S 416
K L +S I+ + G EA ++ M PN I+GS L + S
Sbjct: 231 MKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGS 290
Query: 417 RLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARV 462
++HG + I E A + + GCS L ++YA G+ N RV
Sbjct: 291 QIHG-LCIKSELAGNAI---AGCS-----LCDMYARCGFLNSARRV 327
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 263 bits (671), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 140/386 (36%), Positives = 219/386 (56%), Gaps = 10/386 (2%)
Query: 99 LIEDMLENSVINHVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQ 158
+I +EN +I G + ++ V +G+ + C DL+GG
Sbjct: 277 MIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGL-------ILMGCARFGDLSGGRC 329
Query: 159 YHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWR 218
HC A+ GFI ++ V +++IS Y++ DA+R F E+ ++V+S+ ++I G R
Sbjct: 330 VHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCR 389
Query: 219 VDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNA 278
+ LFH MR S ++P+ T +L+AC ALG+G H + G+ + NA
Sbjct: 390 PEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNA 449
Query: 279 LIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPD 338
L+ MY+KCG +D A +F+ M RD+V+WN+M+ G+ HGL +EA+SLF M + GV+PD
Sbjct: 450 LMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPD 509
Query: 339 AVTYLSLLSSCRHGGLVKEGQVYFNSMV--EHGVQPKLDHYSCIVDLLGRAGLIREARDF 396
VT L++LS+C H GLV EG+ FNSM + V P++DHY+C+ DLL RAG + EA DF
Sbjct: 510 EVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDF 569
Query: 397 IENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWW 456
+ MP P+ + G+LLS+ + N +G E ++ L + +L L+N Y++ W
Sbjct: 570 VNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLGE-TTESLVLLSNTYSAAERW 628
Query: 457 NQVARVRKLMKDKGLKPNPGSSWIEV 482
AR+R + K +GL PG SW++V
Sbjct: 629 EDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 123/240 (51%), Gaps = 4/240 (1%)
Query: 177 SLISLYSRCALSGDAYRVFEEMPER--NVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEM 234
+L LY+ C A VF+E+P N ++W +I +A + L+L++ M S +
Sbjct: 40 NLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGV 99
Query: 235 KPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALY 294
+P +TY +L AC G A+ G+ H + F + ++V AL+ Y+KCG ++ A+
Sbjct: 100 RPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIK 159
Query: 295 IFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIK-QGVDPDAVTYLSLLSSCRHGG 353
+F+ M RD+V WN+MI+G++ H + I LF +M + G+ P+ T + + + G
Sbjct: 160 VFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAG 219
Query: 354 LVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLL 413
++EG+ G L + I+D+ ++ I AR + ++ N V W +++
Sbjct: 220 ALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARR-VFDLDFKKNEVTWSAMI 278
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 130/261 (49%), Gaps = 8/261 (3%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV 203
+ +C R ++ G H + F ++YV ++L+ Y++C A +VF+EMP+R++
Sbjct: 110 LKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDM 169
Query: 204 VSWTAIIAGFAQEWRVDMCLELFHLMRGSE-MKPNYFTYTSLLSACMGSGALGYGRGAHC 262
V+W A+I+GF+ + + LF MR + + PN T + A +GAL G+ H
Sbjct: 170 VAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHG 229
Query: 263 QIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQE 322
+MGF + L V ++ +Y+K I A +F+ ++ VTW++MI GY ++ + +E
Sbjct: 230 YCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKE 289
Query: 323 AISLFEEMIKQG----VDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYS 378
A +F +M+ V P A+ +L C G + G+ V+ G L +
Sbjct: 290 AGEVFFQMLVNDNVAMVTPVAIGL--ILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQN 347
Query: 379 CIVDLLGRAGLIREA-RDFIE 398
I+ + G + +A R F E
Sbjct: 348 TIISFYAKYGSLCDAFRQFSE 368
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 262 bits (670), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 133/347 (38%), Positives = 210/347 (60%), Gaps = 1/347 (0%)
Query: 169 IANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHL 228
+ N++V ++++S YS+C DA +F++ ++++V WT +I+ + + L +F
Sbjct: 275 VRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEE 334
Query: 229 MRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGV 288
M S +KP+ + S++SAC G L + H I G S L ++NALI MY+KCG
Sbjct: 335 MCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGG 394
Query: 289 IDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSS 348
+D +FE M R+VV+W+SMI + HG A +A+SLF M ++ V+P+ VT++ +L
Sbjct: 395 LDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYG 454
Query: 349 CRHGGLVKEGQVYFNSMV-EHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAV 407
C H GLV+EG+ F SM E+ + PKL+HY C+VDL GRA L+REA + IE+MPV N V
Sbjct: 455 CSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVV 514
Query: 408 IWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMK 467
IWGSL+S+ R+HG + +G AA+ L LEP L ++N+YA W V +R++M+
Sbjct: 515 IWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVME 574
Query: 468 DKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSLVDHMS 514
+K + G S I+ K H F DK +++ ++I +D +V +
Sbjct: 575 EKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLK 621
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 148/296 (50%), Gaps = 32/296 (10%)
Query: 156 GVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQ 215
G++ H +A + + +V + + +Y+ C A VF+EM R+VV+W +I + +
Sbjct: 130 GMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCR 189
Query: 216 EWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGR----------------- 258
VD +LF M+ S + P+ +++SAC +G + Y R
Sbjct: 190 FGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHL 249
Query: 259 ---------GAHCQIIQMGFHSYLHVDN-----ALIAMYSKCGVIDDALYIFENMVGRDV 304
GA C + F + V N A+++ YSKCG +DDA IF+ +D+
Sbjct: 250 LTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDL 309
Query: 305 VTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNS 364
V W +MI+ Y + QEA+ +FEEM G+ PD V+ S++S+C + G++ + + +
Sbjct: 310 VCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSC 369
Query: 365 MVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHG 420
+ +G++ +L + ++++ + G + RD E MP N V W S++++ +HG
Sbjct: 370 IHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPR-RNVVSWSSMINALSMHG 424
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 89/185 (48%), Gaps = 2/185 (1%)
Query: 136 DVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVF 195
DV + +S+C + L+ H G + + + ++LI++Y++C VF
Sbjct: 343 DVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVF 402
Query: 196 EEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALG 255
E+MP RNVVSW+++I + L LF M+ ++PN T+ +L C SG +
Sbjct: 403 EKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVE 462
Query: 256 YGRGAHCQII-QMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM-VGRDVVTWNSMIAG 313
G+ + + L ++ ++ + ++ +AL + E+M V +VV W S+++
Sbjct: 463 EGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSA 522
Query: 314 YAQHG 318
HG
Sbjct: 523 CRIHG 527
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 261 bits (668), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 141/406 (34%), Positives = 225/406 (55%), Gaps = 46/406 (11%)
Query: 143 AVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDA----YR----- 193
+ +C + G Q H LA+ GF + +V S+L+ +Y C DA Y+
Sbjct: 134 VLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEK 193
Query: 194 ------------------------------------VFEEMPERNVVSWTAIIAGFAQEW 217
+F++M +R+VVSW +I+G++
Sbjct: 194 DMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNG 253
Query: 218 RVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDN 277
+E+F M+ +++PNY T S+L A G+L G H G + +
Sbjct: 254 FFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGS 313
Query: 278 ALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDP 337
ALI MYSKCG+I+ A+++FE + +V+TW++MI G+A HG A +AI F +M + GV P
Sbjct: 314 ALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRP 373
Query: 338 DAVTYLSLLSSCRHGGLVKEGQVYFNSMVE-HGVQPKLDHYSCIVDLLGRAGLIREARDF 396
V Y++LL++C HGGLV+EG+ YF+ MV G++P+++HY C+VDLLGR+GL+ EA +F
Sbjct: 374 SDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEF 433
Query: 397 IENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWW 456
I NMP+ P+ VIW +LL + R+ GNV +G A + + P S L+N+YAS G W
Sbjct: 434 ILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNW 493
Query: 457 NQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDI 502
++V+ +R MK+K ++ +PG S I++ +H F +D S+ + +I
Sbjct: 494 SEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEI 539
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 157/339 (46%), Gaps = 62/339 (18%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSG-------DAYRVFE 196
+++C + RDL+ Q H + I +G + + + ++ CA S A+++F
Sbjct: 30 INNCRTIRDLS---QIHAVFIKSGQMRDTLAAAEILRF---CATSDLHHRDLDYAHKIFN 83
Query: 197 EMPERNVVSWTAIIAGFAQ--EWRVDMCLELFHLMRGSE-MKPNYFTYTSLLSACMGSGA 253
+MP+RN SW II GF++ E + + + LF+ M E ++PN FT+ S+L AC +G
Sbjct: 84 QMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGK 143
Query: 254 LGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALY------------------- 294
+ G+ H ++ GF V + L+ MY CG + DA
Sbjct: 144 IQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRK 203
Query: 295 --------------------------IFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFE 328
+F+ M R VV+WN+MI+GY+ +G ++A+ +F
Sbjct: 204 RDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFR 263
Query: 329 EMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAG 388
EM K + P+ VT +S+L + G ++ G+ + G++ S ++D+ + G
Sbjct: 264 EMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCG 323
Query: 389 LIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIE 427
+I +A E +P N + W ++++ +HG I+
Sbjct: 324 IIEKAIHVFERLPR-ENVITWSAMINGFAIHGQAGDAID 361
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 261 bits (668), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 141/392 (35%), Positives = 223/392 (56%), Gaps = 9/392 (2%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV 203
+++C LN G+Q H L + +GF +V V + LI Y +C + +F EM +N
Sbjct: 216 LNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNA 275
Query: 204 VSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQ 263
VSW +++A + Q + L+ R ++ + F +S+LSAC G L GR H
Sbjct: 276 VSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAH 335
Query: 264 IIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEA 323
++ + V +AL+ MY KCG I+D+ F+ M +++VT NS+I GYA G A
Sbjct: 336 AVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMA 395
Query: 324 ISLFEEMIKQGV--DPDAVTYLSLLSSCRHGGLVKEGQVYFNSM-VEHGVQPKLDHYSCI 380
++LFEEM +G P+ +T++SLLS+C G V+ G F+SM +G++P +HYSCI
Sbjct: 396 LALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCI 455
Query: 381 VDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCS 440
VD+LGRAG++ A +FI+ MP+ P +WG+L ++ R+HG +G+ AAE+ L+P S
Sbjct: 456 VDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDS 515
Query: 441 ATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMS 500
L+N +A+ G W + VR+ +K G+K G SWI VK++VH F+A+D+S+
Sbjct: 516 GNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNK 575
Query: 501 DILLVIDSLVDHMSS------LSLQSHMYEEE 526
+I + L + M + L L + EEE
Sbjct: 576 EIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEE 607
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 137/287 (47%), Gaps = 3/287 (1%)
Query: 156 GVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQ 215
G Q H LA+ G I +V+VG S +Y + L DA ++F+E+PERN+ +W A I+
Sbjct: 127 GKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVT 186
Query: 216 EWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHV 275
+ R +E F R + PN T+ + L+AC L G H +++ GF + + V
Sbjct: 187 DGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSV 246
Query: 276 DNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGV 335
N LI Y KC I + IF M ++ V+W S++A Y Q+ ++A L+ K V
Sbjct: 247 CNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIV 306
Query: 336 DPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARD 395
+ S+LS+C ++ G+ V+ V+ + S +VD+ G+ G I ++
Sbjct: 307 ETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQ 366
Query: 396 FIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSAT 442
+ MP N V SL+ G V + + E + GC T
Sbjct: 367 AFDEMPE-KNLVTRNSLIGGYAHQGQVDMALALFEE--MAPRGCGPT 410
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 102/206 (49%), Gaps = 14/206 (6%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP 199
+S +S+C L G H A+ ++VGS+L+ +Y +C D+ + F+EMP
Sbjct: 313 ISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP 372
Query: 200 ERNVVSWTAIIAGFAQEWRVDMCLELFHLM--RGSEMKPNYFTYTSLLSACMGSGALGYG 257
E+N+V+ ++I G+A + +VDM L LF M RG PNY T+ SLLSAC +GA+ G
Sbjct: 373 EKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENG 432
Query: 258 RGAHCQI-----IQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM-VGRDVVTWNSMI 311
+ I+ G Y + ++ M + G+++ A + M + + W ++
Sbjct: 433 MKIFDSMRSTYGIEPGAEHY----SCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQ 488
Query: 312 AGYAQHGLAQEAISLFEEMIKQGVDP 337
HG Q + E + K +DP
Sbjct: 489 NACRMHGKPQLGLLAAENLFK--LDP 512
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 111/243 (45%), Gaps = 1/243 (0%)
Query: 173 YVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGS 232
++ + LI++YS+ A V P RNVVSWT++I+G AQ L F MR
Sbjct: 43 FLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRRE 102
Query: 233 EMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDA 292
+ PN FT+ A G+ H ++ G + V + MY K + DDA
Sbjct: 103 GVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDA 162
Query: 293 LYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHG 352
+F+ + R++ TWN+ I+ G +EAI F E + P+++T+ + L++C
Sbjct: 163 RKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDW 222
Query: 353 GLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSL 412
+ G ++ G + + ++D G+ IR + M NAV W SL
Sbjct: 223 LHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGT-KNAVSWCSL 281
Query: 413 LSS 415
+++
Sbjct: 282 VAA 284
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 260 bits (665), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 140/363 (38%), Positives = 212/363 (58%), Gaps = 1/363 (0%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP 199
+S A+ +C +DL G H + + V + L+ LY L DA +VF+ M
Sbjct: 239 ISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMS 298
Query: 200 ERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRG 259
ERNVV+W ++I+ +++ RV LF M+ + ++ T T++L AC AL G+
Sbjct: 299 ERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKE 358
Query: 260 AHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGL 319
H QI++ + + N+L+ MY KCG ++ + +F+ M+ +D+ +WN M+ YA +G
Sbjct: 359 IHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGN 418
Query: 320 AQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSM-VEHGVQPKLDHYS 378
+E I+LFE MI+ GV PD +T+++LLS C GL + G F M E V P L+HY+
Sbjct: 419 IEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYA 478
Query: 379 CIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPG 438
C+VD+LGRAG I+EA IE MP P+A IWGSLL+S RLHGNV +G AA+ +LEP
Sbjct: 479 CLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPH 538
Query: 439 CSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRR 498
++N+YA W+ V ++R++MK +G+K G SW++VK K+ F A R
Sbjct: 539 NPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFR 598
Query: 499 MSD 501
SD
Sbjct: 599 NSD 601
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 142/281 (50%), Gaps = 5/281 (1%)
Query: 146 SCGSKRDLNGGVQYHCLAITTGFIA-NVYVGSSLISLYSRCALSGDAYRVFEEMPERNVV 204
+C S + L+ G++ L + + N + S LI+L+S C A ++F+++ + +++
Sbjct: 140 ACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLL 199
Query: 205 S---WTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAH 261
+ W A+ G+++ L ++ M S ++P F+ + L AC+ L GRG H
Sbjct: 200 TEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIH 259
Query: 262 CQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQ 321
QI++ V N L+ +Y + G+ DDA +F+ M R+VVTWNS+I+ ++
Sbjct: 260 AQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVH 319
Query: 322 EAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIV 381
E +LF +M ++ + T ++L +C + G+ +++ +P + + ++
Sbjct: 320 EMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLM 379
Query: 382 DLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNV 422
D+ G+ G + +R + M + + W +L+ ++GN+
Sbjct: 380 DMYGKCGEVEYSRRVFDVM-LTKDLASWNIMLNCYAINGNI 419
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 95/215 (44%), Gaps = 2/215 (0%)
Query: 106 NSVINHVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAIT 165
NS+I+ + + + + E+ +G L+ + +C L G + H +
Sbjct: 306 NSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILK 365
Query: 166 TGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLEL 225
+ +V + +SL+ +Y +C + RVF+ M +++ SW ++ +A ++ + L
Sbjct: 366 SKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINL 425
Query: 226 FHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQI-IQMGFHSYLHVDNALIAMYS 284
F M S + P+ T+ +LLS C +G YG ++ + L L+ +
Sbjct: 426 FEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILG 485
Query: 285 KCGVIDDALYIFENMVGRDVVT-WNSMIAGYAQHG 318
+ G I +A+ + E M + + W S++ HG
Sbjct: 486 RAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHG 520
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 260 bits (665), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 149/407 (36%), Positives = 227/407 (55%), Gaps = 33/407 (8%)
Query: 143 AVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVF------- 195
A+SSC R++ G H + GF + + ++LI +Y +C A+R+F
Sbjct: 343 AISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKT 402
Query: 196 ------------------------EEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRG 231
E MPE+N+VSW II+G Q + +E+F M+
Sbjct: 403 VVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQS 462
Query: 232 SE-MKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVID 290
E + + T S+ SAC GAL + + I + G + + L+ M+S+CG +
Sbjct: 463 QEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPE 522
Query: 291 DALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCR 350
A+ IF ++ RDV W + I A G A+ AI LF++MI+QG+ PD V ++ L++C
Sbjct: 523 SAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACS 582
Query: 351 HGGLVKEGQVYFNSMVE-HGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIW 409
HGGLV++G+ F SM++ HGV P+ HY C+VDLLGRAGL+ EA IE+MP+ PN VIW
Sbjct: 583 HGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIW 642
Query: 410 GSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDK 469
SLL++ R+ GNV + AAE +L P + + L+N+YAS G WN +A+VR MK+K
Sbjct: 643 NSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEK 702
Query: 470 GLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSLVDHMSSL 516
GL+ PG+S I+++ K H F + D+S+ M +I ++D + S L
Sbjct: 703 GLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHL 749
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 117/223 (52%), Gaps = 1/223 (0%)
Query: 128 VMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCAL 187
+M + D +S+C R G+Q H L + G+ +++V +SL+ Y+ C
Sbjct: 125 MMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGE 184
Query: 188 SGDAYRVFEEMPERNVVSWTAIIAGFAQ-EWRVDMCLELFHLMRGSEMKPNYFTYTSLLS 246
A +VF+EM ERNVVSWT++I G+A+ ++ D F ++R E+ PN T ++S
Sbjct: 185 LDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVIS 244
Query: 247 ACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVT 306
AC L G + I G + +AL+ MY KC ID A +F+ ++
Sbjct: 245 ACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDL 304
Query: 307 WNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSC 349
N+M + Y + GL +EA+ +F M+ GV PD ++ LS +SSC
Sbjct: 305 CNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSC 347
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/435 (23%), Positives = 191/435 (43%), Gaps = 56/435 (12%)
Query: 7 QVFSEFNGWCYAFFLNNNMSLFHLSLFHSWIQLLFTRNPTFCLT-NQFFRPFSSQKLPPR 65
+VF + F N+ + + S + LLF R ++ +++ PF
Sbjct: 88 EVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKS 147
Query: 66 RANKELANALRILNLVSPKKSASD--IENRRSHL-----------RLIEDMLENSVIN-- 110
RA N ++I L+ A D ++N H ++ ++M E +V++
Sbjct: 148 RAK---GNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWT 204
Query: 111 -----HVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAIT 165
+ + A V ++E+ + + +S+C DL G + +
Sbjct: 205 SMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRN 264
Query: 166 TGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLEL 225
+G N + S+L+ +Y +C A R+F+E N+ A+ + + ++ L +
Sbjct: 265 SGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGV 324
Query: 226 FHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSK 285
F+LM S ++P+ + S +S+C + +G+ H +++ GF S+ ++ NALI MY K
Sbjct: 325 FNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMK 384
Query: 286 CGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEA---------------------- 323
C D A IF+ M + VVTWNS++AGY ++G A
Sbjct: 385 CHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGL 444
Query: 324 --ISLFEEMI--------KQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPK 373
SLFEE I ++GV+ D VT +S+ S+C H G + + + + ++G+Q
Sbjct: 445 VQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLD 504
Query: 374 LDHYSCIVDLLGRAG 388
+ + +VD+ R G
Sbjct: 505 VRLGTTLVDMFSRCG 519
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 111/204 (54%), Gaps = 6/204 (2%)
Query: 206 WTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQII 265
+ ++I G+A + + LF M S + P+ +T+ LSAC S A G G H I+
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 266 QMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAIS 325
+MG+ L V N+L+ Y++CG +D A +F+ M R+VV+W SMI GYA+ A++A+
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 326 LFEEMIK-QGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLL 384
LF M++ + V P++VT + ++S+C ++ G+ + + G++ S +VD+
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 385 GRAGLIREARDFIE-----NMPVC 403
+ I A+ + N+ +C
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLC 305
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 121/258 (46%), Gaps = 13/258 (5%)
Query: 101 EDMLENSVI--NHVGSNL---ATLKTTTEMSSVMEQELGVD---VCFLSHAVSSCGSKRD 152
E M E +++ N + S L + + E+ M+ + GV+ V +S A S+CG
Sbjct: 427 ETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIA-SACGHLGA 485
Query: 153 LNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAG 212
L+ + G +V +G++L+ ++SRC A +F + R+V +WTA I
Sbjct: 486 LDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGA 545
Query: 213 FAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSY 272
A + +ELF M +KP+ + L+AC G + G+ ++++ S
Sbjct: 546 MAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSP 605
Query: 273 LHVD-NALIAMYSKCGVIDDALYIFENM-VGRDVVTWNSMIAGYAQHGLAQEAISLFEEM 330
V ++ + + G++++A+ + E+M + + V WNS++A G + A E++
Sbjct: 606 EDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKI 665
Query: 331 IKQGVDPDAVTYLSLLSS 348
Q + P+ LLS+
Sbjct: 666 --QVLAPERTGSYVLLSN 681
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 260 bits (665), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 157/444 (35%), Positives = 239/444 (53%), Gaps = 37/444 (8%)
Query: 110 NHVGSNLATLKTTTEMSSV----MEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAIT 165
N + SN T E V M+ + D + A+SSC R++ G H +
Sbjct: 306 NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLR 365
Query: 166 TGFIANVYVGSSLISLYSRCALSGDAYRVF------------------------------ 195
GF + + ++LI +Y +C A+R+F
Sbjct: 366 NGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWET 425
Query: 196 -EEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSE-MKPNYFTYTSLLSACMGSGA 253
E MPE+N+VSW II+G Q + +E+F M+ E + + T S+ SAC GA
Sbjct: 426 FETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGA 485
Query: 254 LGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAG 313
L + + I + G + + L+ M+S+CG + A+ IF ++ RDV W + I
Sbjct: 486 LDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGA 545
Query: 314 YAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE-HGVQP 372
A G A+ AI LF++MI+QG+ PD V ++ L++C HGGLV++G+ F SM++ HGV P
Sbjct: 546 MAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSP 605
Query: 373 KLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESR 432
+ HY C+VDLLGRAGL+ EA IE+MP+ PN VIW SLL++ R+ GNV + AAE
Sbjct: 606 EDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKI 665
Query: 433 LLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQ 492
+L P + + L+N+YAS G WN +A+VR MK+KGL+ PG+S I+++ K H F +
Sbjct: 666 QVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSG 725
Query: 493 DKSNRRMSDILLVIDSLVDHMSSL 516
D+S+ M +I ++D + S L
Sbjct: 726 DESHPEMPNIEAMLDEVSQRASHL 749
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 117/223 (52%), Gaps = 1/223 (0%)
Query: 128 VMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCAL 187
+M + D +S+C R G+Q H L + G+ +++V +SL+ Y+ C
Sbjct: 125 MMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGE 184
Query: 188 SGDAYRVFEEMPERNVVSWTAIIAGFAQ-EWRVDMCLELFHLMRGSEMKPNYFTYTSLLS 246
A +VF+EM ERNVVSWT++I G+A+ ++ D F ++R E+ PN T ++S
Sbjct: 185 LDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVIS 244
Query: 247 ACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVT 306
AC L G + I G + +AL+ MY KC ID A +F+ ++
Sbjct: 245 ACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDL 304
Query: 307 WNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSC 349
N+M + Y + GL +EA+ +F M+ GV PD ++ LS +SSC
Sbjct: 305 CNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSC 347
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 142/293 (48%), Gaps = 32/293 (10%)
Query: 128 VMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCAL 187
V ++E+ + + +S+C DL G + + +G N + S+L+ +Y +C
Sbjct: 227 VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNA 286
Query: 188 SGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSA 247
A R+F+E N+ A+ + + ++ L +F+LM S ++P+ + S +S+
Sbjct: 287 IDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISS 346
Query: 248 CMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTW 307
C + +G+ H +++ GF S+ ++ NALI MY KC D A IF+ M + VVTW
Sbjct: 347 CSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTW 406
Query: 308 NSMIAGYAQHGLAQEA------------------------ISLFEEMI--------KQGV 335
NS++AGY ++G A SLFEE I ++GV
Sbjct: 407 NSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGV 466
Query: 336 DPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAG 388
+ D VT +S+ S+C H G + + + + ++G+Q + + +VD+ R G
Sbjct: 467 NADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCG 519
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 111/204 (54%), Gaps = 6/204 (2%)
Query: 206 WTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQII 265
+ ++I G+A + + LF M S + P+ +T+ LSAC S A G G H I+
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 266 QMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAIS 325
+MG+ L V N+L+ Y++CG +D A +F+ M R+VV+W SMI GYA+ A++A+
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 326 LFEEMIK-QGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLL 384
LF M++ + V P++VT + ++S+C ++ G+ + + G++ S +VD+
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 385 GRAGLIREARDFIE-----NMPVC 403
+ I A+ + N+ +C
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLC 305
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 118/257 (45%), Gaps = 11/257 (4%)
Query: 101 EDMLENSVI--NHVGSNL---ATLKTTTEMSSVMEQELGV--DVCFLSHAVSSCGSKRDL 153
E M E +++ N + S L + + E+ M+ + GV D + S+CG L
Sbjct: 427 ETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGAL 486
Query: 154 NGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGF 213
+ + G +V +G++L+ ++SRC A +F + R+V +WTA I
Sbjct: 487 DLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAM 546
Query: 214 AQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYL 273
A + +ELF M +KP+ + L+AC G + G+ ++++ S
Sbjct: 547 AMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPE 606
Query: 274 HVD-NALIAMYSKCGVIDDALYIFENM-VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMI 331
V ++ + + G++++A+ + E+M + + V WNS++A G + A E++
Sbjct: 607 DVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKI- 665
Query: 332 KQGVDPDAVTYLSLLSS 348
Q + P+ LLS+
Sbjct: 666 -QVLAPERTGSYVLLSN 681
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 259 bits (663), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 135/348 (38%), Positives = 201/348 (57%), Gaps = 1/348 (0%)
Query: 146 SCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVS 205
SCG+ +D+ G H L + +GF + + +SL+++Y RC+L D+ RVF+ + N VS
Sbjct: 276 SCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVS 335
Query: 206 WTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQII 265
WT++I+G Q R +M L F M +KPN FT +S L C GR H +
Sbjct: 336 WTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVT 395
Query: 266 QMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAIS 325
+ GF + + LI +Y KCG D A +F+ + DV++ N+MI YAQ+G +EA+
Sbjct: 396 KYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALD 455
Query: 326 LFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLG 385
LFE MI G+ P+ VT LS+L +C + LV+EG F+S + + DHY+C+VDLLG
Sbjct: 456 LFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLG 515
Query: 386 RAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQ 445
RAG + EA + + + P+ V+W +LLS+ ++H V + L +EPG TL
Sbjct: 516 RAGRLEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLIL 574
Query: 446 LANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQD 493
++NLYAS G WN+V ++ MKD LK NP SW+E+ + H F A D
Sbjct: 575 MSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGD 622
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 133/236 (56%), Gaps = 1/236 (0%)
Query: 160 HCLAITTGF-IANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWR 218
H LA+ G ++NV+VGS+L+ +Y + + +A V + + E++VV TA+I G++Q+
Sbjct: 188 HGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGE 247
Query: 219 VDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNA 278
++ F M +++PN +TY S+L +C +G G+ H +++ GF S L +
Sbjct: 248 DTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTS 307
Query: 279 LIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPD 338
L+ MY +C ++DD+L +F+ + + V+W S+I+G Q+G + A+ F +M++ + P+
Sbjct: 308 LLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPN 367
Query: 339 AVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREAR 394
+ T S L C + + +EG+ + ++G S ++DL G+ G AR
Sbjct: 368 SFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMAR 423
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 137/276 (49%), Gaps = 3/276 (1%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP 199
S + C +R ++G + +GF A + GS L+ +C A +VF+ M
Sbjct: 68 FSQLLRQCIDERSISGIKTIQAHMLKSGFPAEIS-GSKLVDASLKCGDIDYARQVFDGMS 126
Query: 200 ERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRG 259
ER++V+W ++IA + R +E++ LM + + P+ +T +S+ A +
Sbjct: 127 ERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQR 186
Query: 260 AHCQIIQMGFH-SYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHG 318
+H + +G S + V +AL+ MY K G +A + + + +DVV ++I GY+Q G
Sbjct: 187 SHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKG 246
Query: 319 LAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYS 378
EA+ F+ M+ + V P+ TY S+L SC + + G++ MV+ G + L +
Sbjct: 247 EDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQT 306
Query: 379 CIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLS 414
++ + R L+ ++ + + PN V W SL+S
Sbjct: 307 SLLTMYLRCSLVDDSLRVFKCIEY-PNQVSWTSLIS 341
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 103/229 (44%), Gaps = 10/229 (4%)
Query: 124 EMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYS 183
E +M + + LS A+ C + G Q H + GF + Y GS LI LY
Sbjct: 355 EFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYG 414
Query: 184 RCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTS 243
+C S A VF+ + E +V+S +I +AQ L+LF M ++PN T S
Sbjct: 415 KCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLS 474
Query: 244 LLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDN----ALIAMYSKCGVIDDALYIFENM 299
+L AC S + G C++ + + N ++ + + G +++A + +
Sbjct: 475 VLLACNNSRLVEEG----CELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEV 530
Query: 300 VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSS 348
+ D+V W ++++ H + A + ++++ ++P L L+S+
Sbjct: 531 INPDLVLWRTLLSACKVHRKVEMAERITRKILE--IEPGDEGTLILMSN 577
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 259 bits (662), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 128/354 (36%), Positives = 214/354 (60%), Gaps = 4/354 (1%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV 203
+++C + + G+Q H L I GF+ YV +SLI+ Y+ C GD+ +VF+E V
Sbjct: 232 ITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQV 291
Query: 204 VSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQ 263
WTA+++G++ + + L +F M + + PN T+ S L++C G L +G+ H
Sbjct: 292 AVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGV 351
Query: 264 IIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEA 323
+++G + V N+L+ MYS G ++DA+ +F + + +V+WNS+I G AQHG + A
Sbjct: 352 AVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWA 411
Query: 324 ISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQ---VYFNSMVEHGVQPKLDHYSCI 380
+F +MI+ +PD +T+ LLS+C H G +++G+ Y +S + H + K+ HY+C+
Sbjct: 412 FVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINH-IDRKIQHYTCM 470
Query: 381 VDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCS 440
VD+LGR G ++EA + IE M V PN ++W +LLS+ R+H +V G +AA + L+ S
Sbjct: 471 VDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSS 530
Query: 441 ATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDK 494
A L+N+YAS G W+ V+++R MK G+ PGSSW+ ++ K H F + D+
Sbjct: 531 AAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQ 584
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 125/246 (50%), Gaps = 3/246 (1%)
Query: 176 SSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMK 235
+S++ Y + DA ++F++MP +NV+SWT +I G Q R L+LF M +K
Sbjct: 163 NSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIK 222
Query: 236 PNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYI 295
+T +++AC + A G H II++GF +V +LI Y+ C I D+ +
Sbjct: 223 STSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKV 282
Query: 296 FENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLV 355
F+ V V W ++++GY+ + ++A+S+F M++ + P+ T+ S L+SC G +
Sbjct: 283 FDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTL 342
Query: 356 KEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARD-FIENMPVCPNAVIWGSLLS 414
G+ V+ G++ + +V + +G + +A FI+ + V W S++
Sbjct: 343 DWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFK--KSIVSWNSIIV 400
Query: 415 SSRLHG 420
HG
Sbjct: 401 GCAQHG 406
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 109/202 (53%), Gaps = 19/202 (9%)
Query: 171 NVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMR 230
+V + + +I+ Y+R DA +F+EMP R+VVSW ++I+G + ++ ++LF M
Sbjct: 65 HVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMP 124
Query: 231 GSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVID 290
+ + ++T++++ C SG + Q+ ++ N+++ Y + G +D
Sbjct: 125 ----ERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAW----NSMVHGYLQFGKVD 176
Query: 291 DALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCR 350
DAL +F+ M G++V++W +MI G Q+ + EA+ LF+ M++ + + + ++++C
Sbjct: 177 DALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACA 236
Query: 351 -----------HGGLVKEGQVY 361
HG ++K G +Y
Sbjct: 237 NAPAFHMGIQVHGLIIKLGFLY 258
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 71/137 (51%), Gaps = 13/137 (9%)
Query: 279 LIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPD 338
+I Y++ + DAL +F+ M RDVV+WNSMI+G + G A+ LF+EM ++ V
Sbjct: 72 MITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSV--- 128
Query: 339 AVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDH--YSCIVDLLGRAGLIREARDF 396
V++ ++++ C G V + + F M P D ++ +V + G + +A
Sbjct: 129 -VSWTAMVNGCFRSGKVDQAERLFYQM------PVKDTAAWNSMVHGYLQFGKVDDALKL 181
Query: 397 IENMPVCPNAVIWGSLL 413
+ MP N + W +++
Sbjct: 182 FKQMP-GKNVISWTTMI 197
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 258 bits (658), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 134/374 (35%), Positives = 214/374 (57%), Gaps = 7/374 (1%)
Query: 160 HCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRV 219
H + + F+++ V ++L ++YS+ A ++F+E PE+++ SW A+I+G+ Q
Sbjct: 342 HGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLT 401
Query: 220 DMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNAL 279
+ + LF M+ SE PN T T +LSAC GAL G+ H + F S ++V AL
Sbjct: 402 EDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTAL 461
Query: 280 IAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDA 339
I MY+KCG I +A +F+ M ++ VTWN+MI+GY HG QEA+++F EM+ G+ P
Sbjct: 462 IGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTP 521
Query: 340 VTYLSLLSSCRHGGLVKEGQVYFNSMV-EHGVQPKLDHYSCIVDLLGRAGLIREARDFIE 398
VT+L +L +C H GLVKEG FNSM+ +G +P + HY+C+VD+LGRAG ++ A FIE
Sbjct: 522 VTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIE 581
Query: 399 NMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQ 458
M + P + +W +LL + R+H + + +E L+P L+N++++ + Q
Sbjct: 582 AMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQ 641
Query: 459 VARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSLVDHMSSLSL 518
A VR+ K + L PG + IE+ H F + D+S+ ++ +I ++ L M
Sbjct: 642 AATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGY 701
Query: 519 QS------HMYEEE 526
Q H EEE
Sbjct: 702 QPETELALHDVEEE 715
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 144/289 (49%), Gaps = 8/289 (2%)
Query: 135 VDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRV 194
+D L + + ++L G+Q H LA TG ++ YV + ISLYS+C +
Sbjct: 219 LDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSAL 278
Query: 195 FEEMPERNVVSWTAIIAGFAQEWRVDMCLELFH--LMRGSEMKPNYFTYTSLLSACMGSG 252
F E + ++V++ A+I G+ ++ L LF ++ G+ ++ ++L+S SG
Sbjct: 279 FREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRS-----STLVSLVPVSG 333
Query: 253 ALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIA 312
L H ++ F S+ V AL +YSK I+ A +F+ + + +WN+MI+
Sbjct: 334 HLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMIS 393
Query: 313 GYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQP 372
GY Q+GL ++AISLF EM K P+ VT +LS+C G + G+ + + +
Sbjct: 394 GYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFES 453
Query: 373 KLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGN 421
+ + ++ + + G I EAR + M N V W +++S LHG
Sbjct: 454 SIYVSTALIGMYAKCGSIAEARRLFDLM-TKKNEVTWNTMISGYGLHGQ 501
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 107/214 (50%), Gaps = 1/214 (0%)
Query: 143 AVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERN 202
A+S+ RD G H A+ G + + +GS+++ +Y + DA +VF+ MPE++
Sbjct: 125 AISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKD 184
Query: 203 VVSWTAIIAGFAQEWRVDMCLELFH-LMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAH 261
+ W +I+G+ + +++F L+ S + + T +L A L G H
Sbjct: 185 TILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIH 244
Query: 262 CQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQ 321
+ G +S+ +V I++YSKCG I +F D+V +N+MI GY +G +
Sbjct: 245 SLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETE 304
Query: 322 EAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLV 355
++SLF+E++ G + T +SL+ H L+
Sbjct: 305 LSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI 338
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 116/245 (47%), Gaps = 4/245 (1%)
Query: 106 NSVINHVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAIT 165
N++I+ N T + + + E + ++ +S+C L+ G H L +
Sbjct: 389 NAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRS 448
Query: 166 TGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLEL 225
T F +++YV ++LI +Y++C +A R+F+ M ++N V+W +I+G+ + L +
Sbjct: 449 TDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNI 508
Query: 226 FHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQII-QMGFHSYLHVDNALIAMYS 284
F+ M S + P T+ +L AC +G + G +I + GF + ++ +
Sbjct: 509 FYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILG 568
Query: 285 KCGVIDDALYIFENM-VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYL 343
+ G + AL E M + W +++ H A ++ E++ + +DPD V Y
Sbjct: 569 RAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFE--LDPDNVGYH 626
Query: 344 SLLSS 348
LLS+
Sbjct: 627 VLLSN 631
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 18/265 (6%)
Query: 158 QYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEW 217
Q H I GF ++ + + L S A +F + +V + ++ GF+
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 218 RVDMCLELF-HLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVD 276
L +F HL + +++KPN TY +SA G GR H Q + G S L +
Sbjct: 98 SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLG 157
Query: 277 NALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVD 336
+ ++ MY K ++DA +F+ M +D + WN+MI+GY ++ + E+I +F ++I +
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217
Query: 337 P-DAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYS------CIVDLLGRAGL 389
D T L +L + V E Q M H + K YS + L + G
Sbjct: 218 RLDTTTLLDILPA------VAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGK 271
Query: 390 IREA----RDFIENMPVCPNAVIWG 410
I+ R+F + V NA+I G
Sbjct: 272 IKMGSALFREFRKPDIVAYNAMIHG 296
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 139/391 (35%), Positives = 215/391 (54%), Gaps = 2/391 (0%)
Query: 136 DVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVF 195
D S + +C S +LN G Q H G + V VG+ L+ Y +C+ A R F
Sbjct: 284 DSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAF 343
Query: 196 EEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKP-NYFTYTSLLSACMGSGAL 254
+E+ E N VSW+AII+G+ Q + + ++ F +R N FTYTS+ AC
Sbjct: 344 QEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADC 403
Query: 255 GYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGY 314
G H I+ + ++ALI MYSKCG +DDA +FE+M D+V W + I+G+
Sbjct: 404 NIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGH 463
Query: 315 AQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMV-EHGVQPK 373
A +G A EA+ LFE+M+ G+ P++VT++++L++C H GLV++G+ ++M+ ++ V P
Sbjct: 464 AYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPT 523
Query: 374 LDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRL 433
+DHY C++D+ R+GL+ EA F++NMP P+A+ W LS H N+ +G A E
Sbjct: 524 IDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELR 583
Query: 434 LLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQD 493
L+P +A NLY G W + A + KLM ++ LK SWI+ K K+HRF D
Sbjct: 584 QLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGD 643
Query: 494 KSNRRMSDILLVIDSLVDHMSSLSLQSHMYE 524
K + + +I + M Q +M E
Sbjct: 644 KHHPQTQEIYEKLKEFDGFMEGDMFQCNMTE 674
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 127/245 (51%), Gaps = 3/245 (1%)
Query: 171 NVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMR 230
+V + + ++ +Y C DA ++F+EM E N VS T +I+ +A++ +D + LF M
Sbjct: 117 SVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGML 176
Query: 231 GSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVID 290
S KP YT+LL + + AL +GR H +I+ G S ++ ++ MY KCG +
Sbjct: 177 ASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLV 236
Query: 291 DALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCR 350
A +F+ M + V ++ GY Q G A++A+ LF +++ +GV+ D+ + +L +C
Sbjct: 237 GAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACA 296
Query: 351 HGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREA-RDFIENMPVCPNAVIW 409
+ G+ + + G++ ++ + +VD + A R F E PN V W
Sbjct: 297 SLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIRE--PNDVSW 354
Query: 410 GSLLS 414
+++S
Sbjct: 355 SAIIS 359
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 132/273 (48%), Gaps = 4/273 (1%)
Query: 151 RDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAII 210
R L+ G Q H I G +N + + ++++Y +C A RVF++M + V+ T ++
Sbjct: 198 RALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLM 257
Query: 211 AGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFH 270
G+ Q R L+LF + ++ + F ++ +L AC L G+ H + ++G
Sbjct: 258 VGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLE 317
Query: 271 SYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEM 330
S + V L+ Y KC + A F+ + + V+W+++I+GY Q +EA+ F+ +
Sbjct: 318 SEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSL 377
Query: 331 IKQGVDP-DAVTYLSLLSSCR-HGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAG 388
+ ++ TY S+ +C GQV+ +++ + + S ++ + + G
Sbjct: 378 RSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGE-SALITMYSKCG 436
Query: 389 LIREARDFIENMPVCPNAVIWGSLLSSSRLHGN 421
+ +A + E+M P+ V W + +S +GN
Sbjct: 437 CLDDANEVFESMDN-PDIVAWTAFISGHAYYGN 468
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 146/387 (37%), Positives = 222/387 (57%), Gaps = 15/387 (3%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV 203
+ +C + G Q HC + GF +VYV + LI LY C A +VF+EMPER++
Sbjct: 158 LKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSL 217
Query: 204 VSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQ 263
VSW ++I + D L+LF M+ S +P+ +T S+LSAC G G+L G AH
Sbjct: 218 VSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAF 276
Query: 264 IIQ---MGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLA 320
+++ + + V N+LI MY KCG + A +F+ M RD+ +WN+MI G+A HG A
Sbjct: 277 LLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRA 336
Query: 321 QEAISLFEEMI--KQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMV-EHGVQPKLDHY 377
+EA++ F+ M+ ++ V P++VT++ LL +C H G V +G+ YF+ MV ++ ++P L+HY
Sbjct: 337 EEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHY 396
Query: 378 SCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHG-NVWIGIEAAESRLLLE 436
CIVDL+ RAG I EA D + +MP+ P+AVIW SLL + G +V + E A + + +
Sbjct: 397 GCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTK 456
Query: 437 P-------GCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRF 489
CS L+ +YAS WN V VRKLM + G++ PG S IE+ H F
Sbjct: 457 EDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEF 516
Query: 490 EAQDKSNRRMSDILLVIDSLVDHMSSL 516
A D S+ + I + + D + S+
Sbjct: 517 FAGDTSHPQTKQIYQQLKVIDDRLRSI 543
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 103/204 (50%), Gaps = 8/204 (3%)
Query: 152 DLNGGVQYHCLAITTGFI---ANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTA 208
D++ Q H + T + A +++ ++ L S + A+RVF+ + + W
Sbjct: 60 DMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNT 119
Query: 209 IIAGFAQEW-RVDMCLELFHLM--RGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQII 265
+I A + R + L+ M RG E P+ T+ +L AC G+ HCQI+
Sbjct: 120 LIRACAHDVSRKEEAFMLYRKMLERG-ESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIV 178
Query: 266 QMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAIS 325
+ GF ++V+N LI +Y CG +D A +F+ M R +V+WNSMI + G A+
Sbjct: 179 KHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQ 238
Query: 326 LFEEMIKQGVDPDAVTYLSLLSSC 349
LF EM ++ +PD T S+LS+C
Sbjct: 239 LFREM-QRSFEPDGYTMQSVLSAC 261
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 128/372 (34%), Positives = 215/372 (57%), Gaps = 1/372 (0%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP 199
L+ +CG +N G Q H AI +G+ +++V S ++ +Y +C A F+ +P
Sbjct: 520 LATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIP 579
Query: 200 ERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRG 259
+ V+WT +I+G + + +F MR + P+ FT +L A AL GR
Sbjct: 580 VPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQ 639
Query: 260 AHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGL 319
H +++ + V +L+ MY+KCG IDDA +F+ + ++ WN+M+ G AQHG
Sbjct: 640 IHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGE 699
Query: 320 AQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSM-VEHGVQPKLDHYS 378
+E + LF++M G+ PD VT++ +LS+C H GLV E + SM ++G++P+++HYS
Sbjct: 700 GKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYS 759
Query: 379 CIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPG 438
C+ D LGRAGL+++A + IE+M + +A ++ +LL++ R+ G+ G A L LEP
Sbjct: 760 CLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPL 819
Query: 439 CSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRR 498
S+ L+N+YA+ W+++ R +MK +K +PG SWIEVK+K+H F D+SNR+
Sbjct: 820 DSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQ 879
Query: 499 MSDILLVIDSLV 510
I + ++
Sbjct: 880 TELIYRKVKDMI 891
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 146/305 (47%), Gaps = 6/305 (1%)
Query: 111 HVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIA 170
H G A LK +M +E ++ D +++ L G Q HC+A+ G
Sbjct: 292 HSGQYSALLKCFADM---VESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDL 348
Query: 171 NVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMR 230
+ V +SLI++Y + G A VF+ M ER+++SW ++IAG AQ + LF +
Sbjct: 349 MLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLL 408
Query: 231 GSEMKPNYFTYTSLLSACMG-SGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVI 289
+KP+ +T TS+L A L + H I++ S V ALI YS+ +
Sbjct: 409 RCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCM 468
Query: 290 DDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSC 349
+A +FE D+V WN+M+AGY Q + + LF M KQG D T ++ +C
Sbjct: 469 KEAEILFERH-NFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTC 527
Query: 350 RHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIW 409
+ +G+ ++ G L S I+D+ + G + A+ +++PV P+ V W
Sbjct: 528 GFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV-PDDVAW 586
Query: 410 GSLLS 414
+++S
Sbjct: 587 TTMIS 591
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 109/214 (50%), Gaps = 10/214 (4%)
Query: 139 FLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEM 198
FL +A++S DL G H +T ++ ++LIS+YS+C A RVF++M
Sbjct: 45 FLRNAITS----SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKM 100
Query: 199 PERNVVSWTAIIAGFAQEWR-----VDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGA 253
P+R++VSW +I+A +AQ + LF ++R + + T + +L C+ SG
Sbjct: 101 PDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGY 160
Query: 254 LGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAG 313
+ H ++G V AL+ +Y K G + + +FE M RDVV WN M+
Sbjct: 161 VWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKA 220
Query: 314 YAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLS 347
Y + G +EAI L G++P+ +T L LL+
Sbjct: 221 YLEMGFKEEAIDLSSAFHSSGLNPNEIT-LRLLA 253
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 147/317 (46%), Gaps = 5/317 (1%)
Query: 106 NSVINHVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGS-KRDLNGGVQYHCLAI 164
NSVI + N ++ ++ L D ++ + + S L+ Q H AI
Sbjct: 385 NSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAI 444
Query: 165 TTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLE 224
+++ +V ++LI YSR +A +FE ++V+W A++AG+ Q L+
Sbjct: 445 KINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLK 503
Query: 225 LFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYS 284
LF LM + + FT ++ C A+ G+ H I+ G+ L V + ++ MY
Sbjct: 504 LFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYV 563
Query: 285 KCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLS 344
KCG + A + F+++ D V W +MI+G ++G + A +F +M GV PD T +
Sbjct: 564 KCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIAT 623
Query: 345 LLSSCRHGGLVKEG-QVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVC 403
L + +++G Q++ N++ + S +VD+ + G I +A + + +
Sbjct: 624 LAKASSCLTALEQGRQIHANALKLNCTNDPFVGTS-LVDMYAKCGSIDDAYCLFKRIEMM 682
Query: 404 PNAVIWGSLLSSSRLHG 420
N W ++L HG
Sbjct: 683 -NITAWNAMLVGLAQHG 698
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 83/177 (46%), Gaps = 6/177 (3%)
Query: 244 LLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRD 303
L + S L G+ H +I+ + + N LI+MYSKCG + A +F+ M RD
Sbjct: 45 FLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRD 104
Query: 304 VVTWNSMIAGYAQHGLA-----QEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEG 358
+V+WNS++A YAQ Q+A LF + + V +T +L C H G V
Sbjct: 105 LVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWAS 164
Query: 359 QVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSS 415
+ + + G+ +V++ + G ++E + E MP + V+W +L +
Sbjct: 165 ESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPY-RDVVLWNLMLKA 220
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 256 bits (653), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 120/360 (33%), Positives = 215/360 (59%), Gaps = 3/360 (0%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGF--IANVYVGSSLISLYSRCALSGDAYRVFEE 197
L+ + +C S + G Q H + +GF ++ + SL+ LY +C A + F++
Sbjct: 213 LTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQ 272
Query: 198 MPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYG 257
+ E+ ++SW+++I G+AQE + LF ++ + + F +S++ L G
Sbjct: 273 IKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQG 332
Query: 258 RGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQH 317
+ +++ V N+++ MY KCG++D+A F M +DV++W +I GY +H
Sbjct: 333 KQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKH 392
Query: 318 GLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE-HGVQPKLDH 376
GL ++++ +F EM++ ++PD V YL++LS+C H G++KEG+ F+ ++E HG++P+++H
Sbjct: 393 GLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEH 452
Query: 377 YSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLE 436
Y+C+VDLLGRAG ++EA+ I+ MP+ PN IW +LLS R+HG++ +G E + L ++
Sbjct: 453 YACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRID 512
Query: 437 PGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSN 496
A ++NLY G+WN+ R+L KGLK G SW+E++ +VH F + + S+
Sbjct: 513 AKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSH 572
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 137/271 (50%), Gaps = 5/271 (1%)
Query: 147 CGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSW 206
C K + G Q HC + +G N+ + LI +Y +C AY+VF+ MPERNVVSW
Sbjct: 16 CTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSW 75
Query: 207 TAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQ 266
+A+++G + L LF M + PN FT+++ L AC AL G H ++
Sbjct: 76 SALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLK 135
Query: 267 MGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISL 326
+GF + V N+L+ MYSKCG I++A +F +V R +++WN+MIAG+ G +A+
Sbjct: 136 IGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDT 195
Query: 327 FEEMIKQGVD--PDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQ--PKLDHYSCIVD 382
F M + + PD T SLL +C G++ G+ +V G +VD
Sbjct: 196 FGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVD 255
Query: 383 LLGRAGLIREARDFIENMPVCPNAVIWGSLL 413
L + G + AR + + + W SL+
Sbjct: 256 LYVKCGYLFSARKAFDQIKE-KTMISWSSLI 285
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 147/285 (51%), Gaps = 5/285 (1%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP 199
S + +CG L G+Q H + GF V VG+SL+ +YS+C +A +VF +
Sbjct: 110 FSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIV 169
Query: 200 ERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMK--PNYFTYTSLLSACMGSGALGYG 257
+R+++SW A+IAGF L+ F +M+ + +K P+ FT TSLL AC +G + G
Sbjct: 170 DRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAG 229
Query: 258 RGAHCQIIQMGFH--SYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYA 315
+ H +++ GFH S + +L+ +Y KCG + A F+ + + +++W+S+I GYA
Sbjct: 230 KQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYA 289
Query: 316 QHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLD 375
Q G EA+ LF+ + + D+ S++ L+++G+ V+ +
Sbjct: 290 QEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETS 349
Query: 376 HYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHG 420
+ +VD+ + GL+ EA M + + + W +++ HG
Sbjct: 350 VLNSVVDMYLKCGLVDEAEKCFAEMQL-KDVISWTVVITGYGKHG 393
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 90/173 (52%), Gaps = 4/173 (2%)
Query: 242 TSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVG 301
S+L C G G HC +++ G L N LI MY KC A +F++M
Sbjct: 10 VSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPE 69
Query: 302 RDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVY 361
R+VV+W+++++G+ +G + ++SLF EM +QG+ P+ T+ + L +C +++G
Sbjct: 70 RNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQI 129
Query: 362 FNSMVEHGVQPKLDHYSCIVDLLGRAGLIREA----RDFIENMPVCPNAVIWG 410
++ G + ++ + +VD+ + G I EA R ++ + NA+I G
Sbjct: 130 HGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAG 182
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 256 bits (653), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 142/358 (39%), Positives = 211/358 (58%), Gaps = 9/358 (2%)
Query: 147 CGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP-ERNVVS 205
CG DL + +A G +A +++I+ Y + A +F++M +N+V+
Sbjct: 199 CG---DLEKASHFFKVAPVRGVVA----WTAMITGYMKAKKVELAEAMFKDMTVNKNLVT 251
Query: 206 WTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQII 265
W A+I+G+ + R + L+LF M ++PN +S L C AL GR H +
Sbjct: 252 WNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVS 311
Query: 266 QMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAIS 325
+ + + +LI+MY KCG + DA +FE M +DVV WN+MI+GYAQHG A +A+
Sbjct: 312 KSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALC 371
Query: 326 LFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMV-EHGVQPKLDHYSCIVDLL 384
LF EMI + PD +T++++L +C H GLV G YF SMV ++ V+P+ DHY+C+VDLL
Sbjct: 372 LFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLL 431
Query: 385 GRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQ 444
GRAG + EA I +MP P+A ++G+LL + R+H NV + AAE L L +A
Sbjct: 432 GRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYV 491
Query: 445 QLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDI 502
QLAN+YAS W VARVRK MK+ + PG SWIE+++KVH F + D+ + + I
Sbjct: 492 QLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSI 549
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 97/178 (54%), Gaps = 3/178 (1%)
Query: 127 SVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCA 186
+++E+ + + LS A+ C L G Q H + + +V +SLIS+Y +C
Sbjct: 274 AMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCG 333
Query: 187 LSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLS 246
GDA+++FE M +++VV+W A+I+G+AQ D L LF M ++++P++ T+ ++L
Sbjct: 334 ELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLL 393
Query: 247 ACMGSGALGYGRGAHCQIIQMGFHSYLHVDN--ALIAMYSKCGVIDDALYIFENMVGR 302
AC +G + G A+ + + + D+ ++ + + G +++AL + +M R
Sbjct: 394 ACNHAGLVNIGM-AYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFR 450
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 121/271 (44%), Gaps = 41/271 (15%)
Query: 178 LISLYSRCALSGD---AYRVFEEMPERNVVSWTAIIAGFAQE-WRVDMCLELFHLMRGSE 233
L + +RC SGD A RVF M +N ++W +++ G +++ R+ +LF +
Sbjct: 64 LNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIP--- 120
Query: 234 MKPNYFTYTSLLS-----------------------ACMGSGALGYGRGAHCQIIQMGFH 270
+P+ F+Y +LS A + GY R + + F+
Sbjct: 121 -EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFY 179
Query: 271 SYLHVD----NALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISL 326
S + + NA+I+ Y +CG ++ A + F+ R VV W +MI GY + + A ++
Sbjct: 180 SMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAM 239
Query: 327 FEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIV---DL 383
F++M V+ + VT+ +++S ++G F +M+E G++P S +
Sbjct: 240 FKDMT---VNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSE 296
Query: 384 LGRAGLIREARDFIENMPVCPNAVIWGSLLS 414
L L R+ + +C + SL+S
Sbjct: 297 LSALQLGRQIHQIVSKSTLCNDVTALTSLIS 327
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 256 bits (653), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 142/417 (34%), Positives = 236/417 (56%), Gaps = 6/417 (1%)
Query: 106 NSVINHVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAIT 165
NS+I G + K ++ + +D+ L+ +++ S L GG Q+H I
Sbjct: 209 NSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIK 268
Query: 166 TGFIANVYVGSSLISLYSRCALSG---DAYRVFEEMPERNVVSWTAIIAGFA-QEWRVDM 221
GF N +VGS LI YS+C D+ +VF+E+ ++V W +I+G++ E +
Sbjct: 269 AGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEE 328
Query: 222 CLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHS-YLHVDNALI 280
++ F M+ +P+ ++ + SAC + + H I+ S + V+NALI
Sbjct: 329 AVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALI 388
Query: 281 AMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAV 340
++Y K G + DA ++F+ M + V++N MI GYAQHG EA+ L++ M+ G+ P+ +
Sbjct: 389 SLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKI 448
Query: 341 TYLSLLSSCRHGGLVKEGQVYFNSMVE-HGVQPKLDHYSCIVDLLGRAGLIREARDFIEN 399
T++++LS+C H G V EGQ YFN+M E ++P+ +HYSC++DLLGRAG + EA FI+
Sbjct: 449 TFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDA 508
Query: 400 MPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQV 459
MP P +V W +LL + R H N+ + AA ++++P + LAN+YA W ++
Sbjct: 509 MPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEM 568
Query: 460 ARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSLVDHMSSL 516
A VRK M+ K ++ PG SWIEVK K H F A+D S+ + ++ ++ ++ M +
Sbjct: 569 ASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKV 625
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 164/329 (49%), Gaps = 12/329 (3%)
Query: 106 NSVINHVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAIT 165
N++I+ T + + VD LS +++C + DL Q HC +++
Sbjct: 109 NTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLIK--QLHCFSVS 166
Query: 166 TGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPE-RNVVSWTAIIAGFAQEWRVDMCLE 224
GF + V ++ ++ YS+ L +A VF M E R+ VSW ++I + Q L
Sbjct: 167 GGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALA 226
Query: 225 LFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYS 284
L+ M K + FT S+L+A L GR H ++I+ GFH HV + LI YS
Sbjct: 227 LYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYS 286
Query: 285 KCGVID---DALYIFENMVGRDVVTWNSMIAGYA-QHGLAQEAISLFEEMIKQGVDPDAV 340
KCG D D+ +F+ ++ D+V WN+MI+GY+ L++EA+ F +M + G PD
Sbjct: 287 KCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDC 346
Query: 341 TYLSLLSSCRHGGLVKE-GQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIEN 399
+++ + S+C + + Q++ ++ H ++ + ++ L ++G +++AR +
Sbjct: 347 SFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDR 406
Query: 400 MPVCPNAVIWGSLLSSSRLHGNVWIGIEA 428
MP NAV + ++ HG+ G EA
Sbjct: 407 MPEL-NAVSFNCMIKGYAQHGH---GTEA 431
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 148/309 (47%), Gaps = 54/309 (17%)
Query: 149 SKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRC----------------------- 185
++RDL G H L + + ++ Y+ + ++LYS+C
Sbjct: 20 AERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNV 79
Query: 186 ---ALSGD-----AYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPN 237
A + D A ++F+E+P+ + VS+ +I+G+A + LF MR + +
Sbjct: 80 IVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVD 139
Query: 238 YFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFE 297
FT + L++AC L + HC + GF SY V+NA + YSK G++ +A+ +F
Sbjct: 140 GFTLSGLIAACCDRVDL--IKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFY 197
Query: 298 NMVG-RDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCR------ 350
M RD V+WNSMI Y QH +A++L++EMI +G D T S+L++
Sbjct: 198 GMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLI 257
Query: 351 -----HGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPN 405
HG L+K G + NS V G+ +D YS G G+ + F E + P+
Sbjct: 258 GGRQFHGKLIKAG-FHQNSHVGSGL---IDFYS---KCGGCDGMYDSEKVFQEILS--PD 308
Query: 406 AVIWGSLLS 414
V+W +++S
Sbjct: 309 LVVWNTMIS 317
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 80/184 (43%), Gaps = 19/184 (10%)
Query: 241 YTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMV 300
+ +L S C G L Y R A + SY N ++ Y+K I A +F+ +
Sbjct: 49 FVNLYSKC---GRLSYARAAFYSTEEPNVFSY----NVIVKAYAKDSKIHIARQLFDEIP 101
Query: 301 GRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSS-CRHGGLVKEGQ 359
D V++N++I+GYA A+ LF+ M K G + D T L+++ C L+K+
Sbjct: 102 QPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLIKQLH 161
Query: 360 VYFNSMVEHGVQPKLDHYSCI----VDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSS 415
+ V D YS + V + GL+REA M + V W S++ +
Sbjct: 162 CF-------SVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVA 214
Query: 416 SRLH 419
H
Sbjct: 215 YGQH 218
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 255 bits (652), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 221/383 (57%), Gaps = 4/383 (1%)
Query: 135 VDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSR--CALSGDAY 192
D+ + +S+C + G H + I G ++LIS+Y + DA
Sbjct: 303 TDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDAL 362
Query: 193 RVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSG 252
+FE + ++++SW +II GFAQ+ + ++ F +R SE+K + + +++LL +C
Sbjct: 363 SLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLA 422
Query: 253 ALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGR-DVVTWNSMI 311
L G+ H + GF S V ++LI MYSKCG+I+ A F+ + + V WN+MI
Sbjct: 423 TLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMI 482
Query: 312 AGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE-HGV 370
GYAQHGL Q ++ LF +M Q V D VT+ ++L++C H GL++EG N M + +
Sbjct: 483 LGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKI 542
Query: 371 QPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAE 430
QP+++HY+ VDLLGRAGL+ +A++ IE+MP+ P+ ++ + L R G + + + A
Sbjct: 543 QPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVAN 602
Query: 431 SRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFE 490
L +EP T L+++Y+ + W + A V+K+MK++G+K PG SWIE++++V F
Sbjct: 603 HLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFN 662
Query: 491 AQDKSNRRMSDILLVIDSLVDHM 513
A+D+SN DI ++I L M
Sbjct: 663 AEDRSNPLCQDIYMMIKDLTQEM 685
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 128/240 (53%), Gaps = 19/240 (7%)
Query: 135 VDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRV 194
VD S + S + + G Q H L I G+ NVYVGSSL+ +Y++C DA+
Sbjct: 99 VDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEA 158
Query: 195 FEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKP----NYFTYTSLLSACMG 250
F+E+ E N VSW A+IAGF Q + L LM EMK + T+ LL+
Sbjct: 159 FKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLM---EMKAAVTMDAGTFAPLLTLLDD 215
Query: 251 SGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVG-RDVVTWNS 309
+ H +++++G + + NA+I+ Y+ CG + DA +F+ + G +D+++WNS
Sbjct: 216 PMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNS 275
Query: 310 MIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCR-----------HGGLVKEG 358
MIAG+++H L + A LF +M + V+ D TY LLS+C HG ++K+G
Sbjct: 276 MIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKG 335
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 138/266 (51%), Gaps = 3/266 (1%)
Query: 158 QYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP-ERNVVSWTAIIAGFAQE 216
Q H + G + + +++IS Y+ C DA RVF+ + ++++SW ++IAGF++
Sbjct: 224 QVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKH 283
Query: 217 WRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVD 276
+ ELF M+ ++ + +TYT LLSAC G +G+ H +I+ G
Sbjct: 284 ELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSAT 343
Query: 277 NALIAMYSK--CGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQG 334
NALI+MY + G ++DAL +FE++ +D+++WNS+I G+AQ GL+++A+ F +
Sbjct: 344 NALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSE 403
Query: 335 VDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREAR 394
+ D + +LL SC ++ GQ + G S ++ + + G+I AR
Sbjct: 404 IKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESAR 463
Query: 395 DFIENMPVCPNAVIWGSLLSSSRLHG 420
+ + + V W +++ HG
Sbjct: 464 KCFQQISSKHSTVAWNAMILGYAQHG 489
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 135/264 (51%), Gaps = 7/264 (2%)
Query: 160 HCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRV 219
HC AI G I+++YV + ++ Y + G A +F+EMP+R+ VSW +I+G+ ++
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 220 DMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNAL 279
+ LF M+ S + ++++ LL G H +I+ G+ ++V ++L
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 280 IAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEM-IKQGVDPD 338
+ MY+KC ++DA F+ + + V+WN++IAG+ Q + A L M +K V D
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMD 202
Query: 339 AVTY---LSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARD 395
A T+ L+LL L+K QV+ +++ G+Q ++ + ++ G + +A+
Sbjct: 203 AGTFAPLLTLLDDPMFCNLLK--QVH-AKVLKLGLQHEITICNAMISSYADCGSVSDAKR 259
Query: 396 FIENMPVCPNAVIWGSLLSSSRLH 419
+ + + + W S+++ H
Sbjct: 260 VFDGLGGSKDLISWNSMIAGFSKH 283
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 139/310 (44%), Gaps = 37/310 (11%)
Query: 72 ANALRILNLVSPKKSASDIENRRSHLRLIEDMLENSVINHVGSNLATLKTTTEMSSVMEQ 131
NAL + + P + D + L+ + + NS+I + S +
Sbjct: 343 TNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSS 402
Query: 132 ELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDA 191
E+ VD S + SC L G Q H LA +GF++N +V SSLI +YS+C + A
Sbjct: 403 EIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESA 462
Query: 192 YRVFEEMPER-NVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMG 250
+ F+++ + + V+W A+I G+AQ + L+LF M +K ++ T+T++L+AC
Sbjct: 463 RKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTAC-- 520
Query: 251 SGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSM 310
+H +IQ G L + N + +Y + + + +
Sbjct: 521 ---------SHTGLIQEG----LELLNLMEPVYK---------------IQPRMEHYAAA 552
Query: 311 IAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGV 370
+ + GL +A L E M ++PD + + L CR G ++ N ++E +
Sbjct: 553 VDLLGRAGLVNKAKELIESM---PLNPDPMVLKTFLGVCRACGEIEMATQVANHLLE--I 607
Query: 371 QPKLDHYSCI 380
+P+ DH++ +
Sbjct: 608 EPE-DHFTYV 616
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 254 bits (650), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 137/351 (39%), Positives = 205/351 (58%), Gaps = 7/351 (1%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV 203
+ +C S L G Q + GF +VYVG++LI LY C + DA +VF+EM ERNV
Sbjct: 120 LKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNV 179
Query: 204 VSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQ 263
VSW +I+ + ++++ E F M G P+ T LLSAC G L G+ H Q
Sbjct: 180 VSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSAC--GGNLSLGKLVHSQ 237
Query: 264 IIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEA 323
++ + AL+ MY+K G ++ A +FE MV ++V TW++MI G AQ+G A+EA
Sbjct: 238 VMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEA 297
Query: 324 ISLFEEMIKQ-GVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE-HGVQPKLDHYSCIV 381
+ LF +M+K+ V P+ VT+L +L +C H GLV +G YF+ M + H ++P + HY +V
Sbjct: 298 LQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMV 357
Query: 382 DLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLH---GNVWIGIEAAESRLLLEPG 438
D+LGRAG + EA DFI+ MP P+AV+W +LLS+ +H + IG + + + LEP
Sbjct: 358 DILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPK 417
Query: 439 CSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRF 489
S L +AN +A W + A VR++MK+ +K G S +E+ HRF
Sbjct: 418 RSGNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRF 468
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 102/209 (48%), Gaps = 3/209 (1%)
Query: 205 SWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQI 264
+W + G++ + ++ M+ +KPN T+ LL AC L GR ++
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEV 139
Query: 265 IQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAI 324
++ GF ++V N LI +Y C DA +F+ M R+VV+WNS++ ++G
Sbjct: 140 LKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVF 199
Query: 325 SLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLL 384
F EMI + PD T + LLS+C GG + G++ + ++ ++ + +VD+
Sbjct: 200 ECFCEMIGKRFCPDETTMVVLLSAC--GGNLSLGKLVHSQVMVRELELNCRLGTALVDMY 257
Query: 385 GRAGLIREARDFIENMPVCPNAVIWGSLL 413
++G + AR E M V N W +++
Sbjct: 258 AKSGGLEYARLVFERM-VDKNVWTWSAMI 285
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 254 bits (650), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 136/374 (36%), Positives = 214/374 (57%), Gaps = 2/374 (0%)
Query: 137 VCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFE 196
V +LS A+++C + + G Q H L G + + + S+L+ +YS+C DA+ +FE
Sbjct: 257 VTYLS-ALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFE 315
Query: 197 EMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGY 256
E + VS T I+ G AQ + ++ F M + ++ + +++L +LG
Sbjct: 316 STTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGL 375
Query: 257 GRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQ 316
G+ H +I+ F V+N LI MYSKCG + D+ +F M R+ V+WNSMIA +A+
Sbjct: 376 GKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFAR 435
Query: 317 HGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE-HGVQPKLD 375
HG A+ L+EEM V P VT+LSLL +C H GL+ +G+ N M E HG++P+ +
Sbjct: 436 HGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTE 495
Query: 376 HYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLL 435
HY+CI+D+LGRAGL++EA+ FI+++P+ P+ IW +LL + HG+ +G AAE
Sbjct: 496 HYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQT 555
Query: 436 EPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKS 495
P S+ +AN+Y+S G W + A+ K MK G+ G S IE++ K H F +DK
Sbjct: 556 APDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKL 615
Query: 496 NRRMSDILLVIDSL 509
+ + I V+ L
Sbjct: 616 HPQAEAIYDVLSGL 629
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 168/342 (49%), Gaps = 3/342 (0%)
Query: 134 GVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYR 193
G D L+ +S C + H LAI +G+ + VG+ LI+ Y +C S
Sbjct: 152 GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRG 211
Query: 194 VFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGA 253
VF+ M RNV++ TA+I+G + + L LF LMR + PN TY S L+AC GS
Sbjct: 212 VFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQR 271
Query: 254 LGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAG 313
+ G+ H + + G S L +++AL+ MYSKCG I+DA IFE+ D V+ ++ G
Sbjct: 272 IVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVG 331
Query: 314 YAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPK 373
AQ+G +EAI F M++ GV+ DA ++L + G+ + +++
Sbjct: 332 LAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGN 391
Query: 374 LDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRL 433
+ ++++ + G + +++ MP N V W S++++ HG+ ++ E
Sbjct: 392 TFVNNGLINMYSKCGDLTDSQTVFRRMPK-RNYVSWNSMIAAFARHGHGLAALKLYEEMT 450
Query: 434 LLE-PGCSATLQQLANLYASVGWWNQVARVRKLMKD-KGLKP 473
LE T L + + VG ++ + MK+ G++P
Sbjct: 451 TLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEP 492
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 117/226 (51%), Gaps = 1/226 (0%)
Query: 174 VGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSE 233
V +SL+SLY++C DA ++F+EMP R+V+S + GF + + L M GS
Sbjct: 92 VWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSG 151
Query: 234 MKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDAL 293
++ T T +LS C + H I G+ + V N LI Y KCG
Sbjct: 152 -GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGR 210
Query: 294 YIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGG 353
+F+ M R+V+T ++I+G ++ L ++ + LF M + V P++VTYLS L++C
Sbjct: 211 GVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQ 270
Query: 354 LVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIEN 399
+ EGQ + ++G++ +L S ++D+ + G I +A E+
Sbjct: 271 RIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFES 316
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 254 bits (650), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 140/373 (37%), Positives = 207/373 (55%), Gaps = 1/373 (0%)
Query: 143 AVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERN 202
A+ +C DL G H L++ G NV V +SLIS+Y +C A +F ++ R
Sbjct: 343 ALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRT 402
Query: 203 VVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHC 262
+VSW A+I GFAQ R L F MR +KP+ FTY S+++A + + H
Sbjct: 403 LVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHG 462
Query: 263 QIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQE 322
+++ + V AL+ MY+KCG I A IF+ M R V TWN+MI GY HG +
Sbjct: 463 VVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKA 522
Query: 323 AISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE-HGVQPKLDHYSCIV 381
A+ LFEEM K + P+ VT+LS++S+C H GLV+ G F M E + ++ +DHY +V
Sbjct: 523 ALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMV 582
Query: 382 DLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSA 441
DLLGRAG + EA DFI MPV P ++G++L + ++H NV +AAE L P
Sbjct: 583 DLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGG 642
Query: 442 TLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSD 501
LAN+Y + W +V +VR M +GL+ PG S +E+K++VH F + ++
Sbjct: 643 YHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKK 702
Query: 502 ILLVIDSLVDHMS 514
I ++ L+ H+
Sbjct: 703 IYAFLEKLICHIK 715
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 135/232 (58%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP 199
++ + CG + +L G + H L + +GF +++ + L ++Y++C +A +VF+ MP
Sbjct: 138 FTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMP 197
Query: 200 ERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRG 259
ER++VSW I+AG++Q M LE+ M +KP++ T S+L A + G+
Sbjct: 198 ERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKE 257
Query: 260 AHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGL 319
H ++ GF S +++ AL+ MY+KCG ++ A +F+ M+ R+VV+WNSMI Y Q+
Sbjct: 258 IHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNEN 317
Query: 320 AQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQ 371
+EA+ +F++M+ +GV P V+ + L +C G ++ G+ VE G+
Sbjct: 318 PKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLD 369
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 162/332 (48%), Gaps = 3/332 (0%)
Query: 91 ENRRSHLRLIE-DMLE-NSVINHVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCG 148
E R+ R+ E D++ N+++ N + S+ E+ L + + +
Sbjct: 188 EARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVS 247
Query: 149 SKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTA 208
+ R ++ G + H A+ +GF + V + ++L+ +Y++C A ++F+ M ERNVVSW +
Sbjct: 248 ALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNS 307
Query: 209 IIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMG 268
+I + Q + +F M +KP + L AC G L GR H +++G
Sbjct: 308 MIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELG 367
Query: 269 FHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFE 328
+ V N+LI+MY KC +D A +F + R +V+WN+MI G+AQ+G +A++ F
Sbjct: 368 LDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFS 427
Query: 329 EMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAG 388
+M + V PD TY+S++++ + + ++ + + + +VD+ + G
Sbjct: 428 QMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCG 487
Query: 389 LIREARDFIENMPVCPNAVIWGSLLSSSRLHG 420
I AR I +M + W +++ HG
Sbjct: 488 AIMIAR-LIFDMMSERHVTTWNAMIDGYGTHG 518
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 137/269 (50%), Gaps = 4/269 (1%)
Query: 147 CGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSW 206
C S ++L Q L G + + L+SL+ R +A RVFE + + V +
Sbjct: 47 CSSLKELR---QILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLY 103
Query: 207 TAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQ 266
++ GFA+ +D L+ F MR +++P + +T LL C L G+ H +++
Sbjct: 104 HTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVK 163
Query: 267 MGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISL 326
GF L L MY+KC +++A +F+ M RD+V+WN+++AGY+Q+G+A+ A+ +
Sbjct: 164 SGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEM 223
Query: 327 FEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGR 386
+ M ++ + P +T +S+L + L+ G+ + G ++ + +VD+ +
Sbjct: 224 VKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAK 283
Query: 387 AGLIREARDFIENMPVCPNAVIWGSLLSS 415
G + AR + M + N V W S++ +
Sbjct: 284 CGSLETARQLFDGM-LERNVVSWNSMIDA 311
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 254 bits (649), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 143/389 (36%), Positives = 224/389 (57%), Gaps = 37/389 (9%)
Query: 156 GVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEM----------------- 198
G Q H + GF ++V+V + LI +Y C GDA ++F+EM
Sbjct: 135 GRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGK 194
Query: 199 --------------P--ERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYT 242
P RN VSWT +I+G+A+ R +E+F M ++P+ T
Sbjct: 195 VGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLL 254
Query: 243 SLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGR 302
++LSAC G+L G + G + + ++NA+I MY+K G I AL +FE + R
Sbjct: 255 AVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNER 314
Query: 303 DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYF 362
+VVTW ++IAG A HG EA+++F M+K GV P+ VT++++LS+C H G V G+ F
Sbjct: 315 NVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLF 374
Query: 363 NSM-VEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGN 421
NSM ++G+ P ++HY C++DLLGRAG +REA + I++MP NA IWGSLL++S +H +
Sbjct: 375 NSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHD 434
Query: 422 VWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIE 481
+ +G A + LEP S LANLY+++G W++ +R +MK G+K G S IE
Sbjct: 435 LELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIE 494
Query: 482 VKSKVHRFEAQDKSN---RRMSDILLVID 507
V+++V++F + D ++ R+ +IL +D
Sbjct: 495 VENRVYKFISGDLTHPQVERIHEILQEMD 523
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 158/358 (44%), Gaps = 45/358 (12%)
Query: 158 QYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFA--- 214
Q HC I TG + + I S AY VF P N +I +
Sbjct: 33 QSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLD 92
Query: 215 QEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLH 274
+ + + ++ + KP+ FT+ +L + + +GR H Q++ GF S +H
Sbjct: 93 EPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVH 152
Query: 275 VDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIA---------------------- 312
V LI MY CG + DA +F+ M+ +DV WN+++A
Sbjct: 153 VVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWV 212
Query: 313 -----------GYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVY 361
GYA+ G A EAI +F+ M+ + V+PD VT L++LS+C G ++ G+
Sbjct: 213 RNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERI 272
Query: 362 FNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGN 421
+ + G+ + + ++D+ ++G I +A D E + N V W ++++ HG+
Sbjct: 273 CSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNE-RNVVTWTTIIAGLATHGH 331
Query: 422 VWIGIEA-AESRLLLEPGC---SATLQQLANLYASVGWWNQVARVRKLMKDK-GLKPN 474
G EA A +++ G T + + + VGW + R+ M+ K G+ PN
Sbjct: 332 ---GAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPN 386
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 109/239 (45%), Gaps = 5/239 (2%)
Query: 136 DVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVF 195
D L +S+C L G + G V + +++I +Y++ A VF
Sbjct: 249 DEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVF 308
Query: 196 EEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALG 255
E + ERNVV+WT IIAG A L +F+ M + ++PN T+ ++LSAC G +
Sbjct: 309 ECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVD 368
Query: 256 YG-RGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGR-DVVTWNSMIAG 313
G R + + G H + +I + + G + +A + ++M + + W S++A
Sbjct: 369 LGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAA 428
Query: 314 YAQHGLAQEAISLFEEMIKQGVDP-DAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQ 371
H + E+IK ++P ++ Y+ L + + G E ++ N M GV+
Sbjct: 429 SNVHHDLELGERALSELIK--LEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVK 485
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 147/390 (37%), Positives = 209/390 (53%), Gaps = 16/390 (4%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAIT-------TGFIANVYVGSSLISLYSRCALSGDAY 192
L +S C S L G + HC AI G V + LI +Y++C A
Sbjct: 368 LISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTAR 427
Query: 193 RVFEEM--PERNVVSWTAIIAGFAQEWRVDMCLELFHLM--RGSEMKPNYFTYTSLLSAC 248
+F+ + ER+VV+WT +I G++Q + LEL M + +PN FT + L AC
Sbjct: 428 AMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVAC 487
Query: 249 MGSGALGYGRGAHCQIIQMGFHSY-LHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTW 307
AL G+ H ++ ++ L V N LI MY+KCG I DA +F+NM+ ++ VTW
Sbjct: 488 ASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTW 547
Query: 308 NSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSM-V 366
S++ GY HG +EA+ +F+EM + G D VT L +L +C H G++ +G YFN M
Sbjct: 548 TSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKT 607
Query: 367 EHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGI 426
GV P +HY+C+VDLLGRAG + A IE MP+ P V+W + LS R+HG V +G
Sbjct: 608 VFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGE 667
Query: 427 EAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKV 486
AAE L + L+NLYA+ G W V R+R LM+ KG+K PG SW+E
Sbjct: 668 YAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGT 727
Query: 487 HRFEAQDKSNRRMSDILLVIDSLVDHMSSL 516
F DK++ +I V L+DHM +
Sbjct: 728 TTFFVGDKTHPHAKEIYQV---LLDHMQRI 754
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 133/228 (58%), Gaps = 1/228 (0%)
Query: 146 SCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVS 205
+CG + G H L++ TGFI+NV+VG++L+++YSRC DA +VF+EM +VVS
Sbjct: 136 ACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVS 195
Query: 206 WTAIIAGFAQEWRVDMCLELFHLMRGS-EMKPNYFTYTSLLSACMGSGALGYGRGAHCQI 264
W +II +A+ + + LE+F M +P+ T ++L C G G+ HC
Sbjct: 196 WNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFA 255
Query: 265 IQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAI 324
+ + V N L+ MY+KCG++D+A +F NM +DVV+WN+M+AGY+Q G ++A+
Sbjct: 256 VTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAV 315
Query: 325 SLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQP 372
LFE+M ++ + D VT+ + +S GL E M+ G++P
Sbjct: 316 RLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKP 363
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 189/403 (46%), Gaps = 53/403 (13%)
Query: 67 ANKELANALRILNLVSPKKSASDIENRRSHLRLIEDMLENSVINHVGSNLATLKTTTEMS 126
+N + NAL + + S +S SD + + + + NS+I + L K EM
Sbjct: 160 SNVFVGNAL--VAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESY-AKLGKPKVALEMF 216
Query: 127 SVMEQELGV--DVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSR 184
S M E G D L + + C S + G Q HC A+T+ I N++VG+ L+ +Y++
Sbjct: 217 SRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAK 276
Query: 185 CALSG-------------------------------DAYRVFEEMPER----NVVSWTAI 209
C + DA R+FE+M E +VV+W+A
Sbjct: 277 CGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAA 336
Query: 210 IAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQM-- 267
I+G+AQ L + M S +KPN T S+LS C GAL +G+ HC I+
Sbjct: 337 ISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPI 396
Query: 268 -----GFHSYLHVDNALIAMYSKCGVIDDALYIFENMVG--RDVVTWNSMIAGYAQHGLA 320
G V N LI MY+KC +D A +F+++ RDVVTW MI GY+QHG A
Sbjct: 397 DLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDA 456
Query: 321 QEAISLFEEMIKQGVD--PDAVTYLSLLSSCRHGGLVKEG-QVYFNSMVEHGVQPKLDHY 377
+A+ L EM ++ P+A T L +C ++ G Q++ ++ L
Sbjct: 457 NKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVS 516
Query: 378 SCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHG 420
+C++D+ + G I +AR +NM + N V W SL++ +HG
Sbjct: 517 NCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMHG 558
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 142/313 (45%), Gaps = 11/313 (3%)
Query: 169 IANVYVGSSLISLYSRCALSGDAYRVFEEMP--ERNVVSWTAIIAGFAQEWRVDMCLELF 226
I + + S LIS Y A + P + V W ++I + + CL LF
Sbjct: 56 ILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLF 115
Query: 227 HLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKC 286
LM P+ +T+ + AC ++ G AH + GF S + V NAL+AMYS+C
Sbjct: 116 GLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRC 175
Query: 287 GVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQ-GVDPDAVTYLSL 345
+ DA +F+ M DVV+WNS+I YA+ G + A+ +F M + G PD +T +++
Sbjct: 176 RSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNV 235
Query: 346 LSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPN 405
L C G G+ V + + +C+VD+ + G++ EA NM V +
Sbjct: 236 LPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSV-KD 294
Query: 406 AVIWGSLLSS----SRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVAR 461
V W ++++ R V + + E ++ ++ T + YA G +
Sbjct: 295 VVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMD---VVTWSAAISGYAQRGLGYEALG 351
Query: 462 VRKLMKDKGLKPN 474
V + M G+KPN
Sbjct: 352 VCRQMLSSGIKPN 364
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 126/328 (38%), Positives = 203/328 (61%), Gaps = 1/328 (0%)
Query: 176 SSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMK 235
+S+I Y + A +F +M E+N +SWT +I+G+ Q L+LFH M+ S+++
Sbjct: 185 NSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVE 244
Query: 236 PNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYI 295
P+ + + LSAC GAL G+ H + + + LI MY+KCG +++AL +
Sbjct: 245 PDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEV 304
Query: 296 FENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLV 355
F+N+ + V W ++I+GYA HG +EAIS F EM K G+ P+ +T+ ++L++C + GLV
Sbjct: 305 FKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLV 364
Query: 356 KEGQVYFNSMV-EHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLS 414
+EG++ F SM ++ ++P ++HY CIVDLLGRAGL+ EA+ FI+ MP+ PNAVIWG+LL
Sbjct: 365 EEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLK 424
Query: 415 SSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPN 474
+ R+H N+ +G E E + ++P AN++A W++ A R+LMK++G+
Sbjct: 425 ACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKV 484
Query: 475 PGSSWIEVKSKVHRFEAQDKSNRRMSDI 502
PG S I ++ H F A D+S+ + I
Sbjct: 485 PGCSTISLEGTTHEFLAGDRSHPEIEKI 512
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 136/318 (42%), Gaps = 50/318 (15%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGD----AYRVFEEMP 199
+ C + +L Q H + TG + + Y + +S + + S D A VF+
Sbjct: 21 LQRCSKQEELK---QIHARMLKTGLMQDSYAITKFLS-FCISSTSSDFLPYAQIVFDGFD 76
Query: 200 ERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRG 259
+ W +I GF+ + L L+ M S N +T+ SLL AC A
Sbjct: 77 RPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQ 136
Query: 260 AHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHG- 318
H QI ++G+ + ++ N+LI Y+ G A +F+ + D V+WNS+I GY + G
Sbjct: 137 IHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGK 196
Query: 319 ------------------------------LAQEAISLFEEMIKQGVDPDAVTYLSLLSS 348
+ +EA+ LF EM V+PD V+ + LS+
Sbjct: 197 MDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSA 256
Query: 349 CRHGGLVKEGQ---VYFNSMVEHGVQPKLDHY-SCI-VDLLGRAGLIREARDFIENMPVC 403
C G +++G+ Y N + ++D C+ +D+ + G + EA + +N+
Sbjct: 257 CAQLGALEQGKWIHSYLNK-----TRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKK- 310
Query: 404 PNAVIWGSLLSSSRLHGN 421
+ W +L+S HG+
Sbjct: 311 KSVQAWTALISGYAYHGH 328
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 33/215 (15%)
Query: 136 DVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVF 195
D L++A+S+C L G H T + +G LI +Y++C +A VF
Sbjct: 246 DNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVF 305
Query: 196 EEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALG 255
+ + +++V +WTA+I+G+A + F M+ +KPN T+T++L+AC +G +
Sbjct: 306 KNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVE 365
Query: 256 YGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYA 315
G+ + F+S + D L G I D ++GR
Sbjct: 366 EGK--------LIFYS-MERDYNLKPTIEHYGCIVD-------LLGR------------- 396
Query: 316 QHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCR 350
GL EA +EM + P+AV + +LL +CR
Sbjct: 397 -AGLLDEAKRFIQEM---PLKPNAVIWGALLKACR 427
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 131/321 (40%), Positives = 195/321 (60%), Gaps = 5/321 (1%)
Query: 193 RVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLM--RGSEMKPNYFTYTSLLSACMG 250
RVF++MPERNV SW +I G+AQ RV L F M GS + PN T T +LSAC
Sbjct: 142 RVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGS-VVPNDATMTLVLSACAK 200
Query: 251 SGALGYGRGAHCQIIQMGFHSY-LHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNS 309
GA +G+ H +G++ ++V NALI MY KCG I+ A+ +F+ + RD+++WN+
Sbjct: 201 LGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNT 260
Query: 310 MIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSM-VEH 368
MI G A HG EA++LF EM G+ PD VT++ +L +C+H GLV++G YFNSM +
Sbjct: 261 MINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDF 320
Query: 369 GVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEA 428
+ P+++H C+VDLL RAG + +A +FI MPV +AVIW +LL +S+++ V IG A
Sbjct: 321 SIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVA 380
Query: 429 AESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHR 488
E + LEP A L+N+Y G ++ AR++ M+D G K G SWIE + +
Sbjct: 381 LEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVK 440
Query: 489 FEAQDKSNRRMSDILLVIDSL 509
F + + + R ++ ++ L
Sbjct: 441 FYSSGEKHPRTEELQRILREL 461
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 118/244 (48%), Gaps = 22/244 (9%)
Query: 191 AYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKP--NYFTYTSLLSAC 248
A +VF EM E+NVV WT++I G+ + +L R ++ P + + +++S
Sbjct: 47 ANKVFCEMVEKNVVLWTSMINGYL------LNKDLVSARRYFDLSPERDIVLWNTMISGY 100
Query: 249 MGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWN 308
+ G + R Q+ S+ N ++ Y+ G ++ +F++M R+V +WN
Sbjct: 101 IEMGNMLEARSLFDQMPCRDVMSW----NTVLEGYANIGDMEACERVFDDMPERNVFSWN 156
Query: 309 SMIAGYAQHGLAQEAISLFEEMIKQG-VDPDAVTYLSLLSSCRHGGLVKEGQ---VYFNS 364
+I GYAQ+G E + F+ M+ +G V P+ T +LS+C G G+ Y +
Sbjct: 157 GLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGET 216
Query: 365 MVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWI 424
+ + V + + ++D+ G+ G I A + + + + + W ++++ HG+
Sbjct: 217 LGYNKVDVNVKN--ALIDMYGKCGAIEIAMEVFKGIKR-RDLISWNTMINGLAAHGH--- 270
Query: 425 GIEA 428
G EA
Sbjct: 271 GTEA 274
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 127/310 (40%), Gaps = 54/310 (17%)
Query: 98 RLIEDMLENSVIN------------HVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAVS 145
R+ +DM E +V + V L + K + SV+ + ++ +S
Sbjct: 142 RVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPND-----ATMTLVLS 196
Query: 146 SCGSKRDLNGGVQYHCLAITTGF-IANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVV 204
+C + G H T G+ +V V ++LI +Y +C A VF+ + R+++
Sbjct: 197 ACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLI 256
Query: 205 SWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQI 264
SW +I G A L LFH M+ S + P+ T+ +L AC G + G
Sbjct: 257 SWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDG------- 309
Query: 265 IQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAI 324
+ + + + D +++ CG + D L ++ G +A+
Sbjct: 310 --LAYFNSMFTDFSIMPEIEHCGCVVDLL---------------------SRAGFLTQAV 346
Query: 325 SLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPK-LDHYSCIVDL 383
+M V DAV + +LL + + V G+V +++ ++P+ ++ + ++
Sbjct: 347 EFINKM---PVKADAVIWATLLGASKVYKKVDIGEVALEELIK--LEPRNPANFVMLSNI 401
Query: 384 LGRAGLIREA 393
G AG +A
Sbjct: 402 YGDAGRFDDA 411
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 142/391 (36%), Positives = 217/391 (55%), Gaps = 32/391 (8%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSR------------------- 184
V +C R G+Q H + I GF + +V + LISLY+
Sbjct: 115 VQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDF 174
Query: 185 ---------CALSGD---AYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGS 232
CA GD A ++FE MPER+ ++W A+I+G+AQ L +FHLM+
Sbjct: 175 VCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLE 234
Query: 233 EMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDA 292
+K N S+LSAC GAL GR AH I + + + L+ +Y+KCG ++ A
Sbjct: 235 GVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKA 294
Query: 293 LYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHG 352
+ +F M ++V TW+S + G A +G ++ + LF M + GV P+AVT++S+L C
Sbjct: 295 MEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVV 354
Query: 353 GLVKEGQVYFNSMV-EHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGS 411
G V EGQ +F+SM E G++P+L+HY C+VDL RAG + +A I+ MP+ P+A +W S
Sbjct: 355 GFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSS 414
Query: 412 LLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGL 471
LL +SR++ N+ +G+ A++ L LE L+N+YA W+ V+ VR+ MK KG+
Sbjct: 415 LLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGV 474
Query: 472 KPNPGSSWIEVKSKVHRFEAQDKSNRRMSDI 502
+ PG S +EV +VH F DKS+ + + I
Sbjct: 475 RKQPGCSVMEVNGEVHEFFVGDKSHPKYTQI 505
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 105/224 (46%), Gaps = 32/224 (14%)
Query: 228 LMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCG 287
L G+++KP+ +T L+ AC G G H I+ GF + HV LI++Y++ G
Sbjct: 98 LSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELG 157
Query: 288 VIDD-------------------------------ALYIFENMVGRDVVTWNSMIAGYAQ 316
+D A +FE M RD + WN+MI+GYAQ
Sbjct: 158 CLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQ 217
Query: 317 HGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDH 376
G ++EA+++F M +GV + V +S+LS+C G + +G+ + + + ++ +
Sbjct: 218 VGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRL 277
Query: 377 YSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHG 420
+ +VDL + G + +A + M N W S L+ ++G
Sbjct: 278 ATTLVDLYAKCGDMEKAMEVFWGMEE-KNVYTWSSALNGLAMNG 320
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 146/422 (34%), Positives = 228/422 (54%), Gaps = 38/422 (9%)
Query: 128 VMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCAL 187
++ E+ + S + SC +K G H + G + YV + L+ +Y++
Sbjct: 121 LLSSEINPNEFTFSSLLKSCSTK----SGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGD 176
Query: 188 SGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELF--------------------- 226
A +VF+ MPER++VS TA+I +A++ V+ LF
Sbjct: 177 VVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQH 236
Query: 227 -----------HLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHV 275
L+ + KP+ T + LSAC GAL GR H + + V
Sbjct: 237 GFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKV 296
Query: 276 DNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIK-QG 334
LI MYSKCG +++A+ +F + +D+V WN+MIAGYA HG +Q+A+ LF EM G
Sbjct: 297 CTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITG 356
Query: 335 VDPDAVTYLSLLSSCRHGGLVKEGQVYFNSM-VEHGVQPKLDHYSCIVDLLGRAGLIREA 393
+ P +T++ L +C H GLV EG F SM E+G++PK++HY C+V LLGRAG ++ A
Sbjct: 357 LQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRA 416
Query: 394 RDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASV 453
+ I+NM + ++V+W S+L S +LHG+ +G E AE + L S L+N+YASV
Sbjct: 417 YETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASV 476
Query: 454 GWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSLVDHM 513
G + VA+VR LMK+KG+ PG S IE+++KVH F A D+ + + +I ++ + + +
Sbjct: 477 GDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERI 536
Query: 514 SS 515
S
Sbjct: 537 KS 538
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 116/259 (44%), Gaps = 37/259 (14%)
Query: 194 VFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGA 253
+F + + ++ +TA I + D L+ + SE+ PN FT++SLL +C +
Sbjct: 86 LFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSC----S 141
Query: 254 LGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAG 313
G+ H +++ G +V L+ +Y+K G + A +F+ M R +V+ +MI
Sbjct: 142 TKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITC 201
Query: 314 -------------------------------YAQHGLAQEAISLFEEMIKQG-VDPDAVT 341
YAQHG +A+ LF++++ +G PD +T
Sbjct: 202 YAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEIT 261
Query: 342 YLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMP 401
++ LS+C G ++ G+ + ++ + + ++D+ + G + EA + P
Sbjct: 262 VVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTP 321
Query: 402 VCPNAVIWGSLLSSSRLHG 420
+ V W ++++ +HG
Sbjct: 322 R-KDIVAWNAMIAGYAMHG 339
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 134/388 (34%), Positives = 221/388 (56%), Gaps = 5/388 (1%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV 203
+++C L G Q H + GF +++ ++L+ +Y++ DA + F+ + ER+V
Sbjct: 329 LNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDV 388
Query: 204 VSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQ 263
WT++I+G+ Q + L L+ M+ + + PN T S+L AC L G+ H
Sbjct: 389 ALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGH 448
Query: 264 IIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEA 323
I+ GF + + +AL MYSKCG ++D +F +DVV+WN+MI+G + +G EA
Sbjct: 449 TIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEA 508
Query: 324 ISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEH-GVQPKLDHYSCIVD 382
+ LFEEM+ +G++PD VT+++++S+C H G V+ G YFN M + G+ PK+DHY+C+VD
Sbjct: 509 LELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVD 568
Query: 383 LLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSAT 442
LL RAG ++EA++FIE+ + +W LLS+ + HG +G+ A E + L S+T
Sbjct: 569 LLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESST 628
Query: 443 LQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSD- 501
QL+ +Y ++G V RV K M+ G+ G SWIE+K++ H F D + + +
Sbjct: 629 YVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEET 688
Query: 502 ---ILLVIDSLVDHMSSLSLQSHMYEEE 526
+ LV +++ L S EEE
Sbjct: 689 KDLVCLVSRQMIEEGFVTVLDSSFVEEE 716
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 156/302 (51%), Gaps = 5/302 (1%)
Query: 130 EQELGVDVCFLSHAV-SSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALS 188
E+E G D ++ AV SS + + G Q HC+ I G + V + ++L+++YS+C
Sbjct: 213 EKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESL 272
Query: 189 GDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSAC 248
+A ++F+ +RN ++W+A++ G++Q ++LF M + +KP+ +T +L+AC
Sbjct: 273 NEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNAC 332
Query: 249 MGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWN 308
L G+ H ++++GF +L AL+ MY+K G + DA F+ + RDV W
Sbjct: 333 SDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWT 392
Query: 309 SMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEH 368
S+I+GY Q+ +EA+ L+ M G+ P+ T S+L +C ++ G+ ++H
Sbjct: 393 SLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKH 452
Query: 369 GVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEA 428
G ++ S + + + G + + P + V W +++S +G G EA
Sbjct: 453 GFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTP-NKDVVSWNAMISGLSHNGQ---GDEA 508
Query: 429 AE 430
E
Sbjct: 509 LE 510
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 118/228 (51%), Gaps = 7/228 (3%)
Query: 127 SVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCA 186
S + EL L ++ +R+L G H I TG + + L++ Y++C
Sbjct: 4 STFQTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCG 63
Query: 187 LSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVD---MCLELFHLMRGSEMKPNYFTYTS 243
A+ +F + ++VVSW ++I G++Q + ++LF MR ++ PN +T
Sbjct: 64 KLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAG 123
Query: 244 LLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRD 303
+ A + GR AH +++M ++VD +L+ MY K G+++D L +F M R+
Sbjct: 124 IFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERN 183
Query: 304 VVTWNSMIAGYAQHGLAQEAISLFEEMIK---QGVDPDAVTYLSLLSS 348
TW++M++GYA G +EAI +F ++ +G D D V + ++LSS
Sbjct: 184 TYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYV-FTAVLSS 230
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 112/237 (47%), Gaps = 3/237 (1%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP 199
++ + +C S L G Q H I GF V +GS+L ++YS+C D VF P
Sbjct: 426 MASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTP 485
Query: 200 ERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRG 259
++VVSW A+I+G + + D LELF M M+P+ T+ +++SAC G + G
Sbjct: 486 NKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWF 545
Query: 260 AHCQII-QMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM-VGRDVVTWNSMIAGYAQH 317
+ Q+G + ++ + S+ G + +A E+ + + W +++ H
Sbjct: 546 YFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNH 605
Query: 318 GLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKL 374
G + + E+++ G ++ TY+ L G +++ + + M +GV ++
Sbjct: 606 GKCELGVYAGEKLMALG-SRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEV 661
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 133/372 (35%), Positives = 213/372 (57%), Gaps = 22/372 (5%)
Query: 153 LNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRV----------------FE 196
L G++ H + +G +N VG SLI +YS+C + +A ++ E
Sbjct: 498 LGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELE 557
Query: 197 EMPERNV----VSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSG 252
+M + + VSW +II+G+ + + + LF M + P+ FTY ++L C
Sbjct: 558 KMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLA 617
Query: 253 ALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIA 312
+ G G+ H Q+I+ S +++ + L+ MYSKCG + D+ +FE + RD VTWN+MI
Sbjct: 618 SAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMIC 677
Query: 313 GYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMV-EHGVQ 371
GYA HG +EAI LFE MI + + P+ VT++S+L +C H GL+ +G YF M ++G+
Sbjct: 678 GYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLD 737
Query: 372 PKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLH-GNVWIGIEAAE 430
P+L HYS +VD+LG++G ++ A + I MP + VIW +LL +H NV + EA
Sbjct: 738 PQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATA 797
Query: 431 SRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFE 490
+ L L+P S+ L+N+YA G W +V+ +R+ M+ LK PG SW+E+K ++H F
Sbjct: 798 ALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFL 857
Query: 491 AQDKSNRRMSDI 502
DK++ R +I
Sbjct: 858 VGDKAHPRWEEI 869
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 138/280 (49%), Gaps = 12/280 (4%)
Query: 118 TLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSS 177
LK EM V GV + + SC + +L G Q H A+ + F A+ V ++
Sbjct: 265 ALKFFKEMQKV---NAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTA 321
Query: 178 LISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPN 237
+ +Y++C DA +F+ N S+ A+I G++QE L LFH + S + +
Sbjct: 322 TLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFD 381
Query: 238 YFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVD----NALIAMYSKCGVIDDAL 293
+ + + AC AL G QI + S L +D NA I MY KC + +A
Sbjct: 382 EISLSGVFRAC----ALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAF 437
Query: 294 YIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGG 353
+F+ M RD V+WN++IA + Q+G E + LF M++ ++PD T+ S+L +C GG
Sbjct: 438 RVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GG 496
Query: 354 LVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREA 393
+ G +S+V+ G+ ++D+ + G+I EA
Sbjct: 497 SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEA 536
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 149/316 (47%), Gaps = 1/316 (0%)
Query: 106 NSVINHVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAIT 165
NS+++ N +LK+ + + + D + + C D + G+Q H + +
Sbjct: 149 NSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVR 208
Query: 166 TGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLEL 225
G +V S+L+ +Y++ ++ RVF+ +PE+N VSW+AIIAG Q + + L+
Sbjct: 209 VGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKF 268
Query: 226 FHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSK 285
F M+ + Y S+L +C L G H ++ F + V A + MY+K
Sbjct: 269 FKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAK 328
Query: 286 CGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSL 345
C + DA +F+N + ++N+MI GY+Q +A+ LF ++ G+ D ++ +
Sbjct: 329 CDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGV 388
Query: 346 LSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPN 405
+C + EG + ++ + + + +D+ G+ + EA + M +
Sbjct: 389 FRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRR-RD 447
Query: 406 AVIWGSLLSSSRLHGN 421
AV W +++++ +G
Sbjct: 448 AVSWNAIIAAHEQNGK 463
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 103/225 (45%), Gaps = 8/225 (3%)
Query: 126 SSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRC 185
+ +ME + D + + +C + G Q H I ++VY+ S+L+ +YS+C
Sbjct: 592 TRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKC 651
Query: 186 ALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLL 245
D+ +FE+ R+ V+W A+I G+A + + ++LF M +KPN+ T+ S+L
Sbjct: 652 GDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISIL 711
Query: 246 SACMGSGALGYGRGAHCQIIQ-MGFHSYLHVDNALIAMYSKCGVIDDALYIFENM-VGRD 303
AC G + G + + G L + ++ + K G + AL + M D
Sbjct: 712 RACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEAD 771
Query: 304 VVTWNSMIAGYAQH----GLAQEAISLFEEMIKQGVDPDAVTYLS 344
V W +++ H +A+EA + + Q D A T LS
Sbjct: 772 DVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQ--DSSAYTLLS 814
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 103/241 (42%), Gaps = 31/241 (12%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP 199
S C + L G Q H I +GF +V + L+ +Y+ A VF++MP
Sbjct: 51 FSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMP 110
Query: 200 ERNVVSWTAIIAGFAQEWRVDMCLELFHLM-----------------RGSEMKP------ 236
R+VVSW +I G+++ + F++M G +K
Sbjct: 111 LRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVD 170
Query: 237 --------NYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGV 288
+ T+ +L C G H ++++G + + +AL+ MY+K
Sbjct: 171 MGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKR 230
Query: 289 IDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSS 348
++L +F+ + ++ V+W+++IAG Q+ L A+ F+EM K Y S+L S
Sbjct: 231 FVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRS 290
Query: 349 C 349
C
Sbjct: 291 C 291
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 85/205 (41%), Gaps = 32/205 (15%)
Query: 241 YTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMV 300
++ + C GAL G+ AH +I GF V N L+ +Y+ A +F+ M
Sbjct: 51 FSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMP 110
Query: 301 GRDVVTWNSMI-------------------------------AGYAQHGLAQEAISLFEE 329
RDVV+WN MI +GY Q+G + ++I +F +
Sbjct: 111 LRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVD 170
Query: 330 MIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGL 389
M ++G++ D T+ +L C G +V G + S ++D+ +
Sbjct: 171 MGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKR 230
Query: 390 IREARDFIENMPVCPNAVIWGSLLS 414
E+ + +P N+V W ++++
Sbjct: 231 FVESLRVFQGIPE-KNSVSWSAIIA 254
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 252 bits (644), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 128/320 (40%), Positives = 195/320 (60%), Gaps = 1/320 (0%)
Query: 175 GSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEM 234
+ +I+ YS C +A +F+++ ++ V WTA+I G + ++ LELF M+ +
Sbjct: 192 ATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENV 251
Query: 235 KPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALY 294
N FT +LSAC GAL GR H + V NALI MYS+CG I++A
Sbjct: 252 SANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARR 311
Query: 295 IFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGL 354
+F M +DV+++N+MI+G A HG + EAI+ F +M+ +G P+ VT ++LL++C HGGL
Sbjct: 312 VFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGL 371
Query: 355 VKEGQVYFNSMVE-HGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLL 413
+ G FNSM V+P+++HY CIVDLLGR G + EA FIEN+P+ P+ ++ G+LL
Sbjct: 372 LDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLL 431
Query: 414 SSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKP 473
S+ ++HGN+ +G + A+ E S T L+NLYAS G W + +R+ M+D G++
Sbjct: 432 SACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEK 491
Query: 474 NPGSSWIEVKSKVHRFEAQD 493
PG S IEV +++H F D
Sbjct: 492 EPGCSTIEVDNQIHEFLVGD 511
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 134/294 (45%), Gaps = 40/294 (13%)
Query: 160 HCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRV 219
H I T + +V LI + S AY VF + NV +TA+I GF R
Sbjct: 49 HAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRS 108
Query: 220 DMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVD--- 276
+ L+H M + + P+ + TS+L AC L R H Q++++GF S V
Sbjct: 109 ADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCREIHAQVLKLGFGSSRSVGLKM 164
Query: 277 ----------------------------NALIAMYSKCGVIDDALYIFENMVGRDVVTWN 308
+I YS+CG I +AL +F+++ +D V W
Sbjct: 165 MEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWT 224
Query: 309 SMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEH 368
+MI G ++ +A+ LF EM + V + T + +LS+C G ++ G+ + +S VE+
Sbjct: 225 AMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGR-WVHSFVEN 283
Query: 369 GVQPKLDHY--SCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHG 420
+ +L ++ + ++++ R G I EAR M + + + +++S +HG
Sbjct: 284 Q-RMELSNFVGNALINMYSRCGDINEARRVFRVMRD-KDVISYNTMISGLAMHG 335
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 16/277 (5%)
Query: 103 MLENSVINHVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCL 162
M++ V N + L +M +V E VC LS +C L G H
Sbjct: 226 MIDGLVRNKEMNKALELFREMQMENVSANEFTA-VCVLS----ACSDLGALELGRWVHSF 280
Query: 163 AITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMC 222
+ +VG++LI++YSRC +A RVF M +++V+S+ +I+G A
Sbjct: 281 VENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEA 340
Query: 223 LELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDN--ALI 280
+ F M +PN T +LL+AC G L G + ++ F+ +++ ++
Sbjct: 341 INEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRV-FNVEPQIEHYGCIV 399
Query: 281 AMYSKCGVIDDALYIFENM-VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIK---QGVD 336
+ + G +++A EN+ + D + ++++ HG + L E++ K + +
Sbjct: 400 DLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHG----NMELGEKIAKRLFESEN 455
Query: 337 PDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPK 373
PD+ TY+ L + G KE SM + G++ +
Sbjct: 456 PDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKE 492
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 252 bits (644), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 141/400 (35%), Positives = 222/400 (55%), Gaps = 32/400 (8%)
Query: 145 SSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVV 204
SC S G Q H G +V ++LI +Y + DA++VF+EM ER+V+
Sbjct: 117 KSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVI 176
Query: 205 SWTAIIAGFAQEWRVDMCLELFHLM-------------------------------RGSE 233
SW ++++G+A+ ++ LFHLM + +
Sbjct: 177 SWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAG 236
Query: 234 MKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDAL 293
++P+ + S+L +C G+L G+ H + GF V NALI MYSKCGVI A+
Sbjct: 237 IEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAI 296
Query: 294 YIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGG 353
+F M G+DV++W++MI+GYA HG A AI F EM + V P+ +T+L LLS+C H G
Sbjct: 297 QLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVG 356
Query: 354 LVKEGQVYFNSM-VEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSL 412
+ +EG YF+ M ++ ++PK++HY C++D+L RAG + A + + MP+ P++ IWGSL
Sbjct: 357 MWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSL 416
Query: 413 LSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLK 472
LSS R GN+ + + A + + LEP LAN+YA +G W V+R+RK+++++ +K
Sbjct: 417 LSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMK 476
Query: 473 PNPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSLVDH 512
PG S IEV + V F + D S ++I +V+ H
Sbjct: 477 KTPGGSLIEVNNIVQEFVSGDNSKPFWTEISIVLQLFTSH 516
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 140/319 (43%), Gaps = 37/319 (11%)
Query: 191 AYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELF-HLMRGSEMKPNYFTYTSLLSACM 249
A R+F ++ NV + +II + + ++ L+R S P+ FT+ + +C
Sbjct: 61 ATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCA 120
Query: 250 GSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNS 309
G+ G+ H + + G ++ +NALI MY K + DA +F+ M RDV++WNS
Sbjct: 121 SLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNS 180
Query: 310 MIAGYAQHGLAQ-------------------------------EAISLFEEMIKQGVDPD 338
+++GYA+ G + EA+ F EM G++PD
Sbjct: 181 LLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPD 240
Query: 339 AVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIE 398
++ +S+L SC G ++ G+ G + + ++++ + G+I +A
Sbjct: 241 EISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFG 300
Query: 399 NMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAES--RLLLEPGCSATLQQLANLYASVGWW 456
M + + W +++S HGN IE R ++P T L + + VG W
Sbjct: 301 QME-GKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPN-GITFLGLLSACSHVGMW 358
Query: 457 NQVARVRKLMK-DKGLKPN 474
+ R +M+ D ++P
Sbjct: 359 QEGLRYFDMMRQDYQIEPK 377
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 128/291 (43%), Gaps = 49/291 (16%)
Query: 136 DVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVF 195
D L + SC L G H A GF+ V ++LI +YS+C + A ++F
Sbjct: 240 DEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLF 299
Query: 196 EEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALG 255
+M ++V+SW+ +I+G+A +E F+ M+ +++KPN T+ LLSAC
Sbjct: 300 GQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSAC------- 352
Query: 256 YGRGAHCQIIQMGFHSY--LHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAG 313
+H + Q G + + D + G + D L
Sbjct: 353 ----SHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVL-------------------- 388
Query: 314 YAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPK 373
A+ G + A+ + + M + PD+ + SLLSSCR G + V + +VE ++P+
Sbjct: 389 -ARAGKLERAVEITKTM---PMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVE--LEPE 442
Query: 374 -LDHYSCIVDL---LGRAGLIREARDFI--ENMPVCPNAVIWGSLLSSSRL 418
+ +Y + ++ LG+ + R I ENM P GSL+ + +
Sbjct: 443 DMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPG----GSLIEVNNI 489
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 252 bits (643), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 142/385 (36%), Positives = 220/385 (57%), Gaps = 3/385 (0%)
Query: 128 VMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCAL 187
+M+ + D + VS+C + G Q H GF +N+ + ++LI LYS+C
Sbjct: 257 MMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGE 316
Query: 188 SGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSA 247
A +FE +P ++V+SW +I G+ L LF M S PN T S+L A
Sbjct: 317 LETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPA 376
Query: 248 CMGSGALGYGRGAHCQIIQ--MGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVV 305
C GA+ GR H I + G + + +LI MY+KCG I+ A +F +++ + +
Sbjct: 377 CAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLS 436
Query: 306 TWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSM 365
+WN+MI G+A HG A + LF M K G+ PD +T++ LLS+C H G++ G+ F +M
Sbjct: 437 SWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTM 496
Query: 366 VE-HGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWI 424
+ + + PKL+HY C++DLLG +GL +EA + I M + P+ VIW SLL + ++HGNV +
Sbjct: 497 TQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVEL 556
Query: 425 GIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKS 484
G AE+ + +EP + L+N+YAS G WN+VA+ R L+ DKG+K PG S IE+ S
Sbjct: 557 GESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDS 616
Query: 485 KVHRFEAQDKSNRRMSDILLVIDSL 509
VH F DK + R +I +++ +
Sbjct: 617 VVHEFIIGDKFHPRNREIYGMLEEM 641
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 160/311 (51%), Gaps = 36/311 (11%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFE------- 196
+ SC + G Q H + G ++YV +SLIS+Y + DA++VF+
Sbjct: 141 LKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDV 200
Query: 197 ------------------------EMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGS 232
E+P ++VVSW A+I+G+A+ LELF M +
Sbjct: 201 VSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKT 260
Query: 233 EMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDA 292
++P+ T +++SAC SG++ GR H I GF S L + NALI +YSKCG ++ A
Sbjct: 261 NVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETA 320
Query: 293 LYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHG 352
+FE + +DV++WN++I GY L +EA+ LF+EM++ G P+ VT LS+L +C H
Sbjct: 321 CGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHL 380
Query: 353 GLVKEGQ---VYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIW 409
G + G+ VY + ++ GV + ++D+ + G I EA + N + + W
Sbjct: 381 GAIDIGRWIHVYIDKRLK-GVTNASSLRTSLIDMYAKCGDI-EAAHQVFNSILHKSLSSW 438
Query: 410 GSLLSSSRLHG 420
+++ +HG
Sbjct: 439 NAMIFGFAMHG 449
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 132/291 (45%), Gaps = 41/291 (14%)
Query: 160 HCLAITTGFIANVYVGSSLISLYSRCALSGD------AYRVFEEMPERNVVSWTAIIAGF 213
H I G Y S LI C LS A VF+ + E N++ W + G
Sbjct: 53 HAQMIKIGLHNTNYALSKLIEF---CILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGH 109
Query: 214 AQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYL 273
A L+L+ M + PN +T+ +L +C S A G+ H ++++G L
Sbjct: 110 ALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDL 169
Query: 274 HVDNALIAMYSKCGVIDDALYIFENMVGR------------------------------- 302
+V +LI+MY + G ++DA +F+ R
Sbjct: 170 YVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVK 229
Query: 303 DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYF 362
DVV+WN+MI+GYA+ G +EA+ LF++M+K V PD T ++++S+C G ++ G+
Sbjct: 230 DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH 289
Query: 363 NSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLL 413
+ +HG L + ++DL + G + A E +P + + W +L+
Sbjct: 290 LWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY-KDVISWNTLI 339
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 77/165 (46%), Gaps = 12/165 (7%)
Query: 243 SLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGV------IDDALYIF 296
SLL C +L R H Q+I++G H+ + AL + C + + A+ +F
Sbjct: 38 SLLHNCKTLQSL---RIIHAQMIKIGLHN---TNYALSKLIEFCILSPHFEGLPYAISVF 91
Query: 297 ENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVK 356
+ + +++ WN+M G+A A+ L+ MI G+ P++ T+ +L SC K
Sbjct: 92 KTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFK 151
Query: 357 EGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMP 401
EGQ +++ G L ++ ++ + + G + +A + P
Sbjct: 152 EGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSP 196
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 251 bits (642), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 129/364 (35%), Positives = 219/364 (60%), Gaps = 4/364 (1%)
Query: 153 LNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAG 212
L G + H I GF +G ++I +Y++C AY +FE + +R++VSW ++I
Sbjct: 457 LKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITR 516
Query: 213 FAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSY 272
AQ +++F M S + + + ++ LSAC + +G+ H +I+ S
Sbjct: 517 CAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASD 576
Query: 273 LHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMI- 331
++ ++ LI MY+KCG + A+ +F+ M +++V+WNS+IA HG ++++ LF EM+
Sbjct: 577 VYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVE 636
Query: 332 KQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE-HGVQPKLDHYSCIVDLLGRAGLI 390
K G+ PD +T+L ++SSC H G V EG +F SM E +G+QP+ +HY+C+VDL GRAG +
Sbjct: 637 KSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRL 696
Query: 391 REARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLL-LEPGCSATLQQLANL 449
EA + +++MP P+A +WG+LL + RLH NV + E A S+L+ L+P S ++N
Sbjct: 697 TEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELA-EVASSKLMDLDPSNSGYYVLISNA 755
Query: 450 YASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSL 509
+A+ W V +VR LMK++ ++ PG SWIE+ + H F + D ++ S I +++SL
Sbjct: 756 HANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSL 815
Query: 510 VDHM 513
+ +
Sbjct: 816 LGEL 819
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 140/296 (47%), Gaps = 44/296 (14%)
Query: 76 RILNLVSPKKSASD-------IENRRSHLR----LIEDMLENSVINH------------V 112
RIL + + S SD ++ RRS +R +I + N ++N V
Sbjct: 75 RILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGV 134
Query: 113 GSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANV 172
+++T + ++ G+D FLS VSS G N
Sbjct: 135 SPDVSTFPCLVKACVALKNFKGID--FLSDTVSSLGMD-------------------CNE 173
Query: 173 YVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGS 232
+V SSLI Y ++F+ + +++ V W ++ G+A+ +D ++ F +MR
Sbjct: 174 FVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMD 233
Query: 233 EMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDA 292
++ PN T+ +LS C + G H ++ G + N+L++MYSKCG DDA
Sbjct: 234 QISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDA 293
Query: 293 LYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSS 348
+F M D VTWN MI+GY Q GL +E+++ F EMI GV PDA+T+ SLL S
Sbjct: 294 SKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPS 349
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 139/287 (48%), Gaps = 1/287 (0%)
Query: 136 DVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVF 195
D S + S +L Q HC + ++++ S+LI Y +C A +F
Sbjct: 339 DAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIF 398
Query: 196 EEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALG 255
+ +VV +TA+I+G+ LE+F + ++ PN T S+L AL
Sbjct: 399 SQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALK 458
Query: 256 YGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYA 315
GR H II+ GF + ++ A+I MY+KCG ++ A IFE + RD+V+WNSMI A
Sbjct: 459 LGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCA 518
Query: 316 QHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLD 375
Q AI +F +M G+ D V+ + LS+C + G+ M++H + +
Sbjct: 519 QSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVY 578
Query: 376 HYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNV 422
S ++D+ + G ++ A + + M N V W S++++ HG +
Sbjct: 579 SESTLIDMYAKCGNLKAAMNVFKTMKE-KNIVSWNSIIAACGNHGKL 624
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 138/271 (50%), Gaps = 1/271 (0%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV 203
+S C SK ++ GVQ H L + +G + +SL+S+YS+C DA ++F M +
Sbjct: 246 LSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADT 305
Query: 204 VSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQ 263
V+W +I+G+ Q ++ L F+ M S + P+ T++SLL + L Y + HC
Sbjct: 306 VTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCY 365
Query: 264 IIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEA 323
I++ + + +ALI Y KC + A IF DVV + +MI+GY +GL ++
Sbjct: 366 IMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDS 425
Query: 324 ISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDL 383
+ +F ++K + P+ +T +S+L +K G+ +++ G + + ++D+
Sbjct: 426 LEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDM 485
Query: 384 LGRAGLIREARDFIENMPVCPNAVIWGSLLS 414
+ G + A + E + + V W S+++
Sbjct: 486 YAKCGRMNLAYEIFERLSK-RDIVSWNSMIT 515
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 120/280 (42%), Gaps = 9/280 (3%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP 199
LS + +C + L G Q H I + Y ++ +Y+ C D ++F +
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 200 ER--NVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYG 257
R ++ W +II+ F + ++ L + M + P+ T+ L+ AC+ AL
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACV---ALKNF 154
Query: 258 RGAHC---QIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGY 314
+G + +G V ++LI Y + G ID +F+ ++ +D V WN M+ GY
Sbjct: 155 KGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGY 214
Query: 315 AQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKL 374
A+ G I F M + P+AVT+ +LS C L+ G +V GV +
Sbjct: 215 AKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEG 274
Query: 375 DHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLS 414
+ ++ + + G +A M + V W ++S
Sbjct: 275 SIKNSLLSMYSKCGRFDDASKLFRMMSR-ADTVTWNCMIS 313
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 115/259 (44%), Gaps = 16/259 (6%)
Query: 131 QELGVD-VCF----LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRC 185
+++GV +C+ +S A+S+C + + G H I ++VY S+LI +Y++C
Sbjct: 531 RQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKC 590
Query: 186 ALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFH-LMRGSEMKPNYFTYTSL 244
A VF+ M E+N+VSW +IIA ++ L LFH ++ S ++P+ T+ +
Sbjct: 591 GNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEI 650
Query: 245 LSACMGSGALGYG-RGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM-VGR 302
+S+C G + G R G ++ ++ + G + +A ++M
Sbjct: 651 ISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPP 710
Query: 303 DVVTWNSMIAGYAQHG---LAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQ 359
D W +++ H LA+ A S ++ DP Y L+S+ E
Sbjct: 711 DAGVWGTLLGACRLHKNVELAEVASSKLMDL-----DPSNSGYYVLISNAHANAREWESV 765
Query: 360 VYFNSMVEHGVQPKLDHYS 378
S+++ K+ YS
Sbjct: 766 TKVRSLMKEREVQKIPGYS 784
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 251 bits (641), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 136/400 (34%), Positives = 225/400 (56%), Gaps = 15/400 (3%)
Query: 129 MEQELGV--DVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCA 186
ME+ G+ + ++ V +C + H + G + +V ++L+ +YSR
Sbjct: 395 MEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLG 454
Query: 187 LSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSE-----------MK 235
A R+F +M +R++V+W +I G+ + L L H M+ E +K
Sbjct: 455 KIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLK 514
Query: 236 PNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYI 295
PN T ++L +C AL G+ H I+ + + V +AL+ MY+KCG + + +
Sbjct: 515 PNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKV 574
Query: 296 FENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLV 355
F+ + ++V+TWN +I Y HG QEAI L M+ QGV P+ VT++S+ ++C H G+V
Sbjct: 575 FDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMV 634
Query: 356 KEG-QVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPN-AVIWGSLL 413
EG ++++ ++GV+P DHY+C+VDLLGRAG I+EA + MP N A W SLL
Sbjct: 635 DEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLL 694
Query: 414 SSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKP 473
+SR+H N+ IG AA++ + LEP ++ LAN+Y+S G W++ VR+ MK++G++
Sbjct: 695 GASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRK 754
Query: 474 NPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSLVDHM 513
PG SWIE +VH+F A D S+ + + +++L + M
Sbjct: 755 EPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERM 794
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 188/387 (48%), Gaps = 22/387 (5%)
Query: 106 NSVINHVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAIT 165
N+V++ + N L+ + ++ + + D +S + +C L G + H A+
Sbjct: 271 NTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALK 330
Query: 166 TGFI-ANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLE 224
G + N +VGS+L+ +Y C RVF+ M +R + W A+IAG++Q L
Sbjct: 331 NGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALL 390
Query: 225 LFHLMRGSE-MKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMY 283
LF M S + N T ++ AC+ SGA H +++ G V N L+ MY
Sbjct: 391 LFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMY 450
Query: 284 SKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEM------IKQG--- 334
S+ G ID A+ IF M RD+VTWN+MI GY ++A+ L +M + +G
Sbjct: 451 SRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASR 510
Query: 335 --VDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIRE 392
+ P+++T +++L SC + +G+ +++ + + S +VD+ + G ++
Sbjct: 511 VSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQM 570
Query: 393 ARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAE-SRLLLEPGCSATLQQLANLYA 451
+R + +P N + W ++ + +HGN G EA + R+++ G +++A
Sbjct: 571 SRKVFDQIPQ-KNVITWNVIIMAYGMHGN---GQEAIDLLRMMMVQGVKPNEVTFISVFA 626
Query: 452 SV---GWWNQVARVRKLMK-DKGLKPN 474
+ G ++ R+ +MK D G++P+
Sbjct: 627 ACSHSGMVDEGLRIFYVMKPDYGVEPS 653
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 164/336 (48%), Gaps = 43/336 (12%)
Query: 46 TFCLTNQFFRPFSSQKLP-------------PRRANKELANALRILNLVSPKKSASD--- 89
TF L + F PF SQ LP P A +++A+A+ + +S S
Sbjct: 8 TFSLPSIF--PFPSQLLPFSRHKHPYLLRATPTSATEDVASAVSGAPSIFISQSRSPEWW 65
Query: 90 IENRRSHLRLIEDMLENSVINHVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGS 149
I+ RS +R ++L +V+ +V + +K D + +
Sbjct: 66 IDLLRSKVR--SNLLREAVLTYVDMIVLGIKP--------------DNYAFPALLKAVAD 109
Query: 150 KRDLNGGVQYHCLAITTGF-IANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTA 208
+D+ G Q H G+ + +V V ++L++LY +C G Y+VF+ + ERN VSW +
Sbjct: 110 LQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNS 169
Query: 209 IIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSAC----MGSGALGYGRGAHCQI 264
+I+ + +M LE F M ++P+ FT S+++AC M G L G+ H
Sbjct: 170 LISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEG-LMMGKQVHAYG 228
Query: 265 IQMG-FHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEA 323
++ G +S+ + N L+AMY K G + + + + GRD+VTWN++++ Q+ EA
Sbjct: 229 LRKGELNSF--IINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEA 286
Query: 324 ISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQ 359
+ EM+ +GV+PD T S+L +C H +++ G+
Sbjct: 287 LEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGK 322
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 135/361 (37%), Positives = 211/361 (58%), Gaps = 2/361 (0%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV 203
+ +C + + G Q H G A+V+V +SLI++Y RC + VFE++ +
Sbjct: 139 LKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTA 198
Query: 204 VSWTAIIAGFAQEWRVDMCLELFHLM-RGSEMKPNYFTYTSLLSACMGSGALGYGRGAHC 262
SW+++++ A CL LF M + +K S L AC +GAL G H
Sbjct: 199 ASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHG 258
Query: 263 QIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQE 322
+++ + V +L+ MY KCG +D AL+IF+ M R+ +T+++MI+G A HG +
Sbjct: 259 FLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGES 318
Query: 323 AISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHG-VQPKLDHYSCIV 381
A+ +F +MIK+G++PD V Y+S+L++C H GLVKEG+ F M++ G V+P +HY C+V
Sbjct: 319 ALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLV 378
Query: 382 DLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSA 441
DLLGRAGL+ EA + I+++P+ N VIW + LS R+ N+ +G AA+ L L
Sbjct: 379 DLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPG 438
Query: 442 TLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSD 501
++NLY+ W+ VAR R + KGLK PG S +E+K K HRF +QD+S+ + +
Sbjct: 439 DYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKE 498
Query: 502 I 502
I
Sbjct: 499 I 499
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 115/245 (46%), Gaps = 8/245 (3%)
Query: 183 SRCALSG------DAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKP 236
++CA SG A +F + + + +I G+ + L ++ M +P
Sbjct: 71 AKCAHSGWENSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEP 130
Query: 237 NYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIF 296
+ FTY LL AC ++ G+ H Q+ ++G + + V N+LI MY +CG ++ + +F
Sbjct: 131 DNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVF 190
Query: 297 ENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQ-GVDPDAVTYLSLLSSCRHGGLV 355
E + + +W+SM++ A G+ E + LF M + + + +S L +C + G +
Sbjct: 191 EKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGAL 250
Query: 356 KEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSS 415
G ++ + + + + +VD+ + G + +A + M N + + +++S
Sbjct: 251 NLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEK-RNNLTYSAMISG 309
Query: 416 SRLHG 420
LHG
Sbjct: 310 LALHG 314
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 94/185 (50%), Gaps = 2/185 (1%)
Query: 130 EQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSG 189
E L + + A+ +C + LN G+ H + N+ V +SL+ +Y +C
Sbjct: 227 ETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLD 286
Query: 190 DAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACM 249
A +F++M +RN ++++A+I+G A + L +F M ++P++ Y S+L+AC
Sbjct: 287 KALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACS 346
Query: 250 GSGALGYGRGAHCQIIQMG-FHSYLHVDNALIAMYSKCGVIDDALYIFENM-VGRDVVTW 307
SG + GR ++++ G L+ + + G++++AL +++ + ++ V W
Sbjct: 347 HSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIW 406
Query: 308 NSMIA 312
+ ++
Sbjct: 407 RTFLS 411
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 139/439 (31%), Positives = 233/439 (53%), Gaps = 11/439 (2%)
Query: 99 LIEDMLENSVINHVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQ 158
L +D L NSVI L ++ + + + SC L G
Sbjct: 69 LPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKG 128
Query: 159 YHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWR 218
HC A+ +GF + YV ++L++ YS+C A +VF+ MPE+++V+W ++++GF Q
Sbjct: 129 VHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGL 188
Query: 219 VDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNA 278
D +++F+ MR S +P+ T+ SLLSAC +GA+ G H II G + + A
Sbjct: 189 ADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTA 248
Query: 279 LIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQ-GVDP 337
LI +YS+CG + A +F+ M +V W +MI+ Y HG Q+A+ LF +M G P
Sbjct: 249 LINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIP 308
Query: 338 DAVTYLSLLSSCRHGGLVKEGQVYFNSMVE-HGVQPKLDHYSCIVDLLGRAGLIREARDF 396
+ VT++++LS+C H GLV+EG+ + M + + + P ++H+ C+VD+LGRAG + EA F
Sbjct: 309 NNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKF 368
Query: 397 IENMPVCPNAV---IWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASV 453
I + A +W ++L + ++H N +G+E A+ + LEP L+N+YA
Sbjct: 369 IHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALS 428
Query: 454 GWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSLVDHM 513
G ++V+ +R M L+ G S IEV++K + F D+S++ +I +++L+
Sbjct: 429 GKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRC 488
Query: 514 SSLSLQS------HMYEEE 526
+ H EEE
Sbjct: 489 KEIGYAPVSEEVMHQVEEE 507
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 140/354 (39%), Positives = 203/354 (57%), Gaps = 2/354 (0%)
Query: 176 SSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMK 235
+++IS Y+RC L + ++F++M E++VV W A+I G Q R L LF M+ S K
Sbjct: 327 TTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTK 386
Query: 236 PNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYI 295
P+ T LSAC GAL G H I + + + +L+ MY+KCG I +AL +
Sbjct: 387 PDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSV 446
Query: 296 FENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLV 355
F + R+ +T+ ++I G A HG A AIS F EMI G+ PD +T++ LLS+C HGG++
Sbjct: 447 FHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMI 506
Query: 356 KEGQVYFNSMVEH-GVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLS 414
+ G+ YF+ M + P+L HYS +VDLLGRAGL+ EA +E+MP+ +A +WG+LL
Sbjct: 507 QTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLF 566
Query: 415 SSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPN 474
R+HGNV +G +AA+ L L+P S L +Y W R R++M ++G++
Sbjct: 567 GCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKI 626
Query: 475 PGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSLVDHM-SSLSLQSHMYEEEN 527
PG S IEV V F +DKS I + L HM SSLS+ YE N
Sbjct: 627 PGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCLGRHMRSSLSVLFSEYEITN 680
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 131/265 (49%), Gaps = 12/265 (4%)
Query: 158 QYHCLAITTGFIANVYVGSSLISLYSRCALSGDAY-----RVFEEMPERNVVSWTAIIAG 212
Q I G I + + S LI+ CALS Y ++ + + N+ SW I G
Sbjct: 71 QIQAQMIINGLILDPFASSRLIAF---CALSESRYLDYSVKILKGIENPNIFSWNVTIRG 127
Query: 213 FAQEWRVDMCLELFHLMRG---SEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGF 269
F++ L+ M E +P++FTY L C G ++++
Sbjct: 128 FSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRL 187
Query: 270 HSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEE 329
HV NA I M++ CG +++A +F+ RD+V+WN +I GY + G A++AI +++
Sbjct: 188 ELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKL 247
Query: 330 MIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGL 389
M +GV PD VT + L+SSC G + G+ ++ + E+G++ + + ++D+ + G
Sbjct: 248 MESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGD 307
Query: 390 IREARDFIENMPVCPNAVIWGSLLS 414
I EAR +N+ V W +++S
Sbjct: 308 IHEARRIFDNLEK-RTIVSWTTMIS 331
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 142/298 (47%), Gaps = 34/298 (11%)
Query: 160 HCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRV 219
H L + +++V+ S I +++ C +A +VF+E P R++VSW +I G+ +
Sbjct: 181 HVLKLRLELVSHVHNAS--IHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEA 238
Query: 220 DMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNAL 279
+ + ++ LM +KP+ T L+S+C G L G+ + + + G + + NAL
Sbjct: 239 EKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNAL 298
Query: 280 IAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGL-------------------- 319
+ M+SKCG I +A IF+N+ R +V+W +MI+GYA+ GL
Sbjct: 299 MDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWN 358
Query: 320 -----------AQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEH 368
Q+A++LF+EM PD +T + LS+C G + G + ++
Sbjct: 359 AMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKY 418
Query: 369 GVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGI 426
+ + + +VD+ + G I EA + N++ + +++ LHG+ I
Sbjct: 419 SLSLNVALGTSLVDMYAKCGNISEALSVFHGIQT-RNSLTYTAIIGGLALHGDASTAI 475
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 129/285 (45%), Gaps = 15/285 (5%)
Query: 98 RLIEDMLENSVI---NHVGSNLATLKTTTEMSSVMEQELG---VDVCFLSHAVSSCGSKR 151
+L +DM E V+ +G ++ + ++ E + D + H +S+C
Sbjct: 344 KLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLG 403
Query: 152 DLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIA 211
L+ G+ H NV +G+SL+ +Y++C +A VF + RN +++TAII
Sbjct: 404 ALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIG 463
Query: 212 GFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQII-QMGFH 270
G A + F+ M + + P+ T+ LLSAC G + GR Q+ + +
Sbjct: 464 GLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLN 523
Query: 271 SYLHVDNALIAMYSKCGVIDDALYIFENM-VGRDVVTWNSMIAGYAQHGLAQEAISLFEE 329
L + ++ + + G++++A + E+M + D W +++ G HG + L E+
Sbjct: 524 PQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHG----NVELGEK 579
Query: 330 MIKQ--GVDP-DAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQ 371
K+ +DP D+ Y+ L + ++ + M E GV+
Sbjct: 580 AAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVE 624
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 123/345 (35%), Positives = 195/345 (56%), Gaps = 1/345 (0%)
Query: 152 DLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIA 211
DL G H I +G ++ V ++LI +Y++C GD+ ++F M + V+W +I+
Sbjct: 423 DLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVIS 482
Query: 212 GFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHS 271
+ L++ MR SE+ P+ T+ L C A G+ HC +++ G+ S
Sbjct: 483 ACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYES 542
Query: 272 YLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMI 331
L + NALI MYSKCG ++++ +FE M RDVVTW MI Y +G ++A+ F +M
Sbjct: 543 ELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADME 602
Query: 332 KQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEH-GVQPKLDHYSCIVDLLGRAGLI 390
K G+ PD+V +++++ +C H GLV EG F M H + P ++HY+C+VDLL R+ I
Sbjct: 603 KSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKI 662
Query: 391 REARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLY 450
+A +FI+ MP+ P+A IW S+L + R G++ + + L P +N Y
Sbjct: 663 SKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAY 722
Query: 451 ASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKS 495
A++ W++V+ +RK +KDK + NPG SWIEV VH F + D S
Sbjct: 723 AALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDS 767
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 193/381 (50%), Gaps = 18/381 (4%)
Query: 57 FSSQKLPPRRAN-KELANALRILNLVSPKKSASDIENRRSHLRLIEDMLENSVINHVGSN 115
F S KL + ++ +E A++L + VSP K+ L NS+I N
Sbjct: 40 FFSGKLIDKYSHFREPASSLSVFRRVSPAKNV---------------YLWNSIIRAFSKN 84
Query: 116 LATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVG 175
+ + E ++ D + +C D G + + GF ++++VG
Sbjct: 85 GLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVG 144
Query: 176 SSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMK 235
++L+ +YSR L A +VF+EMP R++VSW ++I+G++ + LE++H ++ S +
Sbjct: 145 NALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIV 204
Query: 236 PNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYI 295
P+ FT +S+L A + G+G H ++ G +S + V+N L+AMY K DA +
Sbjct: 205 PDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRV 264
Query: 296 FENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLV 355
F+ M RD V++N+MI GY + + +E++ +F E + Q PD +T S+L +C H +
Sbjct: 265 FDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDL 323
Query: 356 KEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSS 415
+ +N M++ G + + ++D+ + G + ARD +M C + V W S++S
Sbjct: 324 SLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSME-CKDTVSWNSIISG 382
Query: 416 SRLHGNVWIGIEAAESRLLLE 436
G++ ++ + +++E
Sbjct: 383 YIQSGDLMEAMKLFKMMMIME 403
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 124/222 (55%), Gaps = 4/222 (1%)
Query: 139 FLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEM 198
F+S A+SS +LN + H L I+ G ++ + LI YS + VF +
Sbjct: 9 FISRALSSSS---NLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRV 65
Query: 199 -PERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYG 257
P +NV W +II F++ LE + +R S++ P+ +T+ S++ AC G G
Sbjct: 66 SPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMG 125
Query: 258 RGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQH 317
+ QI+ MGF S L V NAL+ MYS+ G++ A +F+ M RD+V+WNS+I+GY+ H
Sbjct: 126 DLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSH 185
Query: 318 GLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQ 359
G +EA+ ++ E+ + PD+ T S+L + + +VK+GQ
Sbjct: 186 GYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQ 227
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 140/285 (49%), Gaps = 1/285 (0%)
Query: 136 DVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVF 195
D+ +S + +CG RDL+ + + GF+ V + LI +Y++C A VF
Sbjct: 306 DLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVF 365
Query: 196 EEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALG 255
M ++ VSW +II+G+ Q + ++LF +M E + ++ TY L+S L
Sbjct: 366 NSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLK 425
Query: 256 YGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYA 315
+G+G H I+ G L V NALI MY+KCG + D+L IF +M D VTWN++I+
Sbjct: 426 FGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACV 485
Query: 316 QHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLD 375
+ G + + +M K V PD T+L L C + G+ ++ G + +L
Sbjct: 486 RFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQ 545
Query: 376 HYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHG 420
+ ++++ + G + + E M + V W ++ + ++G
Sbjct: 546 IGNALIEMYSKCGCLENSSRVFERMSR-RDVVTWTGMIYAYGMYG 589
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 141/274 (51%), Gaps = 2/274 (0%)
Query: 156 GVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQ 215
G H A+ +G + V V + L+++Y + DA RVF+EM R+ VS+ +I G+ +
Sbjct: 226 GQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLK 285
Query: 216 EWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHV 275
V+ + +F L + KP+ T +S+L AC L + + +++ GF V
Sbjct: 286 LEMVEESVRMF-LENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTV 344
Query: 276 DNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGV 335
N LI +Y+KCG + A +F +M +D V+WNS+I+GY Q G EA+ LF+ M+
Sbjct: 345 RNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEE 404
Query: 336 DPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARD 395
D +TYL L+S +K G+ ++ ++ G+ L + ++D+ + G + ++
Sbjct: 405 QADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLK 464
Query: 396 FIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAA 429
+M + V W +++S+ G+ G++
Sbjct: 465 IFSSMGT-GDTVTWNTVISACVRFGDFATGLQVT 497
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 128/353 (36%), Positives = 207/353 (58%), Gaps = 1/353 (0%)
Query: 125 MSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSR 184
S +++ D L+ ++ C S L G + H + G + +GS+L+++YS+
Sbjct: 539 FSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSK 598
Query: 185 CALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSL 244
C A +V++ +PE + VS +++I+G++Q + LF M S + F +S+
Sbjct: 599 CGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSI 658
Query: 245 LSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDV 304
L A S G H I ++G + V ++L+ MYSK G IDD F + G D+
Sbjct: 659 LKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDL 718
Query: 305 VTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNS 364
+ W ++IA YAQHG A EA+ ++ M ++G PD VT++ +LS+C HGGLV+E + NS
Sbjct: 719 IAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNS 778
Query: 365 MV-EHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVW 423
MV ++G++P+ HY C+VD LGR+G +REA FI NM + P+A++WG+LL++ ++HG V
Sbjct: 779 MVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVE 838
Query: 424 IGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPG 476
+G AA+ + LEP + L+N+ A VG W++V RKLMK G++ PG
Sbjct: 839 LGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPG 891
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 183/402 (45%), Gaps = 48/402 (11%)
Query: 80 LVSPKKSASDIENRRSHLRLIEDMLENSVINHVGSNLATLKTTTE----MSSVMEQELGV 135
L+S + DI+ ++D+ +++N + ++ + K + + ++++ L
Sbjct: 392 LISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRT 451
Query: 136 D---VCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAY 192
D VC L +V C LN G Q H + +G + ++ VGSSL +LYS+C ++Y
Sbjct: 452 DEFSVCSL-LSVLDC-----LNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESY 505
Query: 193 RVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSG 252
++F+ +P ++ W ++I+GF + + + LF M P+ T ++L+ C
Sbjct: 506 KLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHP 565
Query: 253 ALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIA 312
+L G+ H ++ G + + +AL+ MYSKCG + A +++ + D V+ +S+I+
Sbjct: 566 SLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLIS 625
Query: 313 GYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQP 372
GY+QHGL Q+ LF +M+ G D+ S+L + G + + G+
Sbjct: 626 GYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCT 685
Query: 373 KLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESR 432
+ S ++ + + G I + + P+ + W +L++S
Sbjct: 686 EPSVGSSLLTMYSKFGSIDDCCKAFSQIN-GPDLIAWTALIAS----------------- 727
Query: 433 LLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPN 474
YA G N+ +V LMK+KG KP+
Sbjct: 728 -----------------YAQHGKANEALQVYNLMKEKGFKPD 752
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 152/301 (50%), Gaps = 17/301 (5%)
Query: 134 GVDV--CFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGD- 190
GV++ C ++ +S+CG + Q H +GF + V ++LIS+YS+ SGD
Sbjct: 346 GVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSK---SGDI 402
Query: 191 --AYRVFEEMPE---RNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLL 245
+ +VFE++ + +N+V+ +I F+Q + + LF M ++ + F+ SLL
Sbjct: 403 DLSEQVFEDLDDIQRQNIVN--VMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL 460
Query: 246 SACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVV 305
S L G+ H ++ G L V ++L +YSKCG ++++ +F+ + +D
Sbjct: 461 SVL---DCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNA 517
Query: 306 TWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSM 365
W SMI+G+ ++G +EAI LF EM+ G PD T ++L+ C + G+
Sbjct: 518 CWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYT 577
Query: 366 VEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIG 425
+ G+ +D S +V++ + G ++ AR + +P + V SL+S HG + G
Sbjct: 578 LRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPEL-DPVSCSSLISGYSQHGLIQDG 636
Query: 426 I 426
Sbjct: 637 F 637
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 131/259 (50%), Gaps = 6/259 (2%)
Query: 171 NVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMR 230
+V++ SL+S YS DA ++F+ +P+ +VVS +I+G+ Q + L F M
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 231 GSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVID 290
+ N +Y S++SAC A + C I+MG+ Y V++ALI ++SK +
Sbjct: 143 FLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFE 202
Query: 291 DALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCR 350
DA +F + + +V WN++IAG ++ LF EM PD+ TY S+L++C
Sbjct: 203 DAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACA 262
Query: 351 HGGLVKEGQVYFNSMVEHGVQPKLDHYSC--IVDLLGRAGLIREARDFIENMPVCPNAVI 408
++ G+V +++ G + D + C IVDL + G + EA + +P P+ V
Sbjct: 263 SLEKLRFGKVVQARVIKCGAE---DVFVCTAIVDLYAKCGHMAEAMEVFSRIPN-PSVVS 318
Query: 409 WGSLLSSSRLHGNVWIGIE 427
W +LS + + +E
Sbjct: 319 WTVMLSGYTKSNDAFSALE 337
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 139/282 (49%), Gaps = 8/282 (2%)
Query: 141 SHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPE 200
S +++C S L G I G +V+V ++++ LY++C +A VF +P
Sbjct: 255 SSVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPN 313
Query: 201 RNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGA 260
+VVSWT +++G+ + LE+F MR S ++ N T TS++SAC +
Sbjct: 314 PSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQV 373
Query: 261 HCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM--VGRDVVTWNSMIAGYAQHG 318
H + + GF+ V ALI+MYSK G ID + +FE++ + R + N MI ++Q
Sbjct: 374 HAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV-NVMITSFSQSK 432
Query: 319 LAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYS 378
+AI LF M+++G+ D + SLLS L K+ Y ++ G+ L S
Sbjct: 433 KPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGY---TLKSGLVLDLTVGS 489
Query: 379 CIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHG 420
+ L + G + E+ + +P NA W S++S +G
Sbjct: 490 SLFTLYSKCGSLEESYKLFQGIPFKDNAC-WASMISGFNEYG 530
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 120/240 (50%), Gaps = 1/240 (0%)
Query: 161 CLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVD 220
C I G+ V S+LI ++S+ DAY+VF + NV W IIAG +
Sbjct: 174 CHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYG 233
Query: 221 MCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALI 280
+LFH M KP+ +TY+S+L+AC L +G+ ++I+ G + V A++
Sbjct: 234 AVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAED-VFVCTAIV 292
Query: 281 AMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAV 340
+Y+KCG + +A+ +F + VV+W M++GY + A A+ +F+EM GV+ +
Sbjct: 293 DLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNC 352
Query: 341 TYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENM 400
T S++S+C +V E + + G + ++ + ++G I + E++
Sbjct: 353 TVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDL 412
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 249 bits (635), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 145/384 (37%), Positives = 209/384 (54%), Gaps = 21/384 (5%)
Query: 135 VDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRV 194
VD S + +C + Q HC G A+ + ++L+ YS+ AY++
Sbjct: 107 VDALTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKL 166
Query: 195 FEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGAL 254
F+EMP R+V SW A+IAG R +EL+ M ++ + T + L AC G +
Sbjct: 167 FDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDV 226
Query: 255 GYGRGAHCQIIQMGFHSYLH----VDNALIAMYSKCGVIDDALYIFENMVGRD-VVTWNS 309
G FH Y + V NA I MYSKCG +D A +FE G+ VVTWN+
Sbjct: 227 KEGENI--------FHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNT 278
Query: 310 MIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHG 369
MI G+A HG A A+ +F+++ G+ PD V+YL+ L++CRH GLV+ G FN+M G
Sbjct: 279 MITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKG 338
Query: 370 VQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAA 429
V+ + HY C+VDLL RAG +REA D I +M + P+ V+W SLL +S ++ +V E A
Sbjct: 339 VERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDV----EMA 394
Query: 430 E--SRLLLEPGCS--ATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSK 485
E SR + E G + L+N+YA+ G W V RVR M+ K +K PG S+IE K
Sbjct: 395 EIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGT 454
Query: 486 VHRFEAQDKSNRRMSDILLVIDSL 509
+H F DKS+ + +I ID +
Sbjct: 455 IHEFYNSDKSHEQWREIYEKIDEI 478
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 122/275 (44%), Gaps = 18/275 (6%)
Query: 164 ITTGFIANVYVGSSLISLYSRCALS--GD---AYRVFEEMPERNVVSWTAIIAGFAQEWR 218
+T G + ++ S L+ RCA+S GD A ++F +P+ W AII GFA
Sbjct: 27 LTAGHFQSSFLRSRLLE---RCAISPFGDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSH 83
Query: 219 VDMCLELFHLMRGSEM------KPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSY 272
+ + M + + T + L AC + HCQI + G +
Sbjct: 84 PSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQLHCQINRRGLSAD 143
Query: 273 LHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIK 332
+ L+ YSK G + A +F+ M RDV +WN++IAG A EA+ L++ M
Sbjct: 144 SLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMET 203
Query: 333 QGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIRE 392
+G+ VT ++ L +C H G VKEG+ F+ V + +D+ + G + +
Sbjct: 204 EGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVS----NAAIDMYSKCGFVDK 259
Query: 393 ARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIE 427
A E + V W ++++ +HG +E
Sbjct: 260 AYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALE 294
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 249 bits (635), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 135/386 (34%), Positives = 216/386 (55%), Gaps = 17/386 (4%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGD---AYRVFEEMPE 200
+ C +++ G + H GF N Y+ L+ LY ALSGD A +F +
Sbjct: 115 LQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILY---ALSGDLQTAGILFRSLKI 171
Query: 201 RNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGA 260
R+++ W A+I+G+ Q+ L +++ MR + + P+ +T+ S+ AC L +G+ A
Sbjct: 172 RDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRA 231
Query: 261 HCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLA 320
H +I+ S + VD+AL+ MY KC D +F+ + R+V+TW S+I+GY HG
Sbjct: 232 HAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKV 291
Query: 321 QEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMV-EHGVQPKLDHYSC 379
E + FE+M ++G P+ VT+L +L++C HGGLV +G +F SM ++G++P+ HY+
Sbjct: 292 SEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAA 351
Query: 380 IVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGC 439
+VD LGRAG ++EA +F+ P + +WGSLL + R+HGNV + AA L L+P
Sbjct: 352 MVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTN 411
Query: 440 SATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNR-- 497
AN YAS G ++VR+ M++ G+K +PG S IE++ +VHRF D S+R
Sbjct: 412 GGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGEVHRFMKDDTSHRLS 471
Query: 498 --------RMSDILLVIDSLVDHMSS 515
M+ + ID D + S
Sbjct: 472 EKIYKKVHEMTSFFMDIDYYPDGLDS 497
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 100/209 (47%), Gaps = 5/209 (2%)
Query: 231 GSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVID 290
G +++P TY LL C G+ H Q+ +GF ++ L+ +Y+ G +
Sbjct: 103 GLQVEPE--TYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQ 160
Query: 291 DALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCR 350
A +F ++ RD++ WN+MI+GY Q GL QE + ++ +M + + PD T+ S+ +C
Sbjct: 161 TAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACS 220
Query: 351 HGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWG 410
++ G+ M++ ++ + S +VD+ + + + + N + W
Sbjct: 221 ALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLST-RNVITWT 279
Query: 411 SLLSSSRLHGNVWIGIEAAESRLLLEPGC 439
SL+S HG V ++ E + E GC
Sbjct: 280 SLISGYGYHGKVSEVLKCFEK--MKEEGC 306
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 249 bits (635), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 138/374 (36%), Positives = 209/374 (55%), Gaps = 11/374 (2%)
Query: 156 GVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQ 215
G H A+ GF+ ++ + ++LI +Y C A +F+ M E+NV+SW +IIA + Q
Sbjct: 349 GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQ 408
Query: 216 EWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHV 275
+ LELF + S + P+ T S+L A S +L GR H I++ + S +
Sbjct: 409 NGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTII 468
Query: 276 DNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGV 335
N+L+ MY+ CG ++DA F +++ +DVV+WNS+I YA HG + ++ LF EMI V
Sbjct: 469 LNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRV 528
Query: 336 DPDAVTYLSLLSSCRHGGLVKEGQVYFNSMV-EHGVQPKLDHYSCIVDLLGRAGLIREAR 394
+P+ T+ SLL++C G+V EG YF SM E+G+ P ++HY C++DL+GR G A+
Sbjct: 529 NPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAK 588
Query: 395 DFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVG 454
F+E MP P A IWGSLL++SR H ++ I AAE +E + L N+YA G
Sbjct: 589 RFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAG 648
Query: 455 WWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSLVDHMS 514
W V R++ LM+ KG+ S +E K K H F D+S+ + I V+D +
Sbjct: 649 RWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVV----- 703
Query: 515 SLSLQSHMYEEENI 528
S M EE+I
Sbjct: 704 -----SRMVGEEDI 712
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 149/286 (52%), Gaps = 7/286 (2%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV 203
+ S L G + H + I GF+++VYV +SLISLY + + DA +VFEEMPER++
Sbjct: 137 IKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDI 196
Query: 204 VSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQ 263
VSW ++I+G+ L LF M KP+ F+ S L AC + G+ HC
Sbjct: 197 VSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCH 256
Query: 264 IIQMGFHS-YLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQE 322
++ + + V +++ MYSK G + A IF M+ R++V WN MI YA++G +
Sbjct: 257 AVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTD 316
Query: 323 AISLFEEMIKQ-GVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIV 381
A F++M +Q G+ PD +T ++LL + + EG+ + G P + + ++
Sbjct: 317 AFLCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMRRGFLPHMVLETALI 372
Query: 382 DLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIE 427
D+ G G ++ A + M N + W S++++ +G + +E
Sbjct: 373 DMYGECGQLKSAEVIFDRMAE-KNVISWNSIIAAYVQNGKNYSALE 417
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 162/338 (47%), Gaps = 13/338 (3%)
Query: 143 AVSSCGSKRDLNGGVQYHCLAITTGF-IANVYVGSSLISLYSRCALSGDAYRVFEEMPER 201
A+ +C G + HC A+ + +V V +S++ +YS+ A R+F M +R
Sbjct: 237 ALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQR 296
Query: 202 NVVSWTAIIAGFAQEWRVDMCLELFHLM-RGSEMKPNYFTYTSLLSACMGSGALGYGRGA 260
N+V+W +I +A+ RV F M + ++P+ T +LL A A+ GR
Sbjct: 297 NIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTI 352
Query: 261 HCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLA 320
H ++ GF ++ ++ ALI MY +CG + A IF+ M ++V++WNS+IA Y Q+G
Sbjct: 353 HGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKN 412
Query: 321 QEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCI 380
A+ LF+E+ + PD+ T S+L + + EG+ +V+ + +
Sbjct: 413 YSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSL 472
Query: 381 VDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHG----NVWIGIEAAESRLLLE 436
V + G + +AR N + + V W S++ + +HG +VW+ E SR+
Sbjct: 473 VHMYAMCGDLEDARKCF-NHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPN 531
Query: 437 PGCSATLQQLANLYASV--GWWNQVARVRKLMKDKGLK 472
A+L ++ V GW + R+ D G++
Sbjct: 532 KSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIE 569
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 123/241 (51%), Gaps = 10/241 (4%)
Query: 187 LSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLS 246
L DA ++F+EM + + W +I GF ++ + M + +K + FTY ++
Sbjct: 79 LMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIK 138
Query: 247 ACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVT 306
+ G +L G+ H +I++GF S ++V N+LI++Y K G DA +FE M RD+V+
Sbjct: 139 SVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVS 198
Query: 307 WNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMV 366
WNSMI+GY G ++ LF+EM+K G PD + +S L +C H K G+ +
Sbjct: 199 WNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGK----EIH 254
Query: 367 EHGVQPKLDH-----YSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGN 421
H V+ +++ + I+D+ + G + A M + N V W ++ +G
Sbjct: 255 CHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNIVAWNVMIGCYARNGR 313
Query: 422 V 422
V
Sbjct: 314 V 314
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 248 bits (634), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 125/345 (36%), Positives = 208/345 (60%), Gaps = 5/345 (1%)
Query: 171 NVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLM- 229
NV ++++S Y+R +A +FE+MPER+V SW AI+A Q + LF M
Sbjct: 192 NVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMI 251
Query: 230 RGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVI 289
++PN T +LSAC +G L +G H + S + V N+L+ +Y KCG +
Sbjct: 252 NEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNL 311
Query: 290 DDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVD---PDAVTYLSLL 346
++A +F+ + + WNSMI +A HG ++EAI++FEEM+K ++ PD +T++ LL
Sbjct: 312 EEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLL 371
Query: 347 SSCRHGGLVKEGQVYFNSMVEH-GVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPN 405
++C HGGLV +G+ YF+ M G++P+++HY C++DLLGRAG EA + + M + +
Sbjct: 372 NACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKAD 431
Query: 406 AVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKL 465
IWGSLL++ ++HG++ + A ++ + L P + +ANLY +G W + R RK+
Sbjct: 432 EAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKM 491
Query: 466 MKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSLV 510
+K + PG S IE+ ++VH+F + DKS+ +I +++DSL+
Sbjct: 492 IKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSLI 536
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 121/264 (45%), Gaps = 13/264 (4%)
Query: 139 FLSHAVSSCGSK-RDLNGGVQYHCLAITTGFIANVYVGSSLISLYSR--CALSGDAYRVF 195
L+ +S+ SK R LN Q I +G + ++ L+ + C LS + +F
Sbjct: 22 LLNQFISAVISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARF-IF 80
Query: 196 EEMPERNVVSWTAIIAGFAQEW--RVDMCLELFHLMRGSEM-KPNYFTYTSLLSACMGSG 252
+ N + A++ ++ F LM + +PN+F Y +L +
Sbjct: 81 DRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLS 140
Query: 253 ALGYGRGAHCQIIQMGFHSYLHVDNALIAMY-SKCGVIDDALYIFENMVGRDVVTWNSMI 311
+ H + + GFH Y+ V AL+ Y S I A +F+ M R+VV+W +M+
Sbjct: 141 SAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAML 200
Query: 312 AGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMV-EHGV 370
+GYA+ G A++LFE+M ++ D ++ ++L++C GL E F M+ E +
Sbjct: 201 SGYARSGDISNAVALFEDMPER----DVPSWNAILAACTQNGLFLEAVSLFRRMINEPSI 256
Query: 371 QPKLDHYSCIVDLLGRAGLIREAR 394
+P C++ + G ++ A+
Sbjct: 257 RPNEVTVVCVLSACAQTGTLQLAK 280
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 128/288 (44%), Gaps = 31/288 (10%)
Query: 80 LVSPKKSASDIENRRSHLRLIEDMLE------NSVINHVGSN------LATLKTTTEMSS 127
++S + DI N + L EDM E N+++ N ++ + S
Sbjct: 199 MLSGYARSGDISNA---VALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPS 255
Query: 128 VMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCAL 187
+ E+ V VC LS +C L H A ++V+V +SL+ LY +C
Sbjct: 256 IRPNEVTV-VCVLS----ACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGN 310
Query: 188 SGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRG---SEMKPNYFTYTSL 244
+A VF+ ++++ +W ++I FA R + + +F M +++KP++ T+ L
Sbjct: 311 LEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGL 370
Query: 245 LSACMGSGALGYGRGAHCQII-QMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM-VGR 302
L+AC G + GRG + + G + LI + + G D+AL + M +
Sbjct: 371 LNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKA 430
Query: 303 DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQ--GVDPDAVTYLSLLSS 348
D W S++ HG + L E +K ++P+ Y++++++
Sbjct: 431 DEAIWGSLLNACKIHG----HLDLAEVAVKNLVALNPNNGGYVAMMAN 474
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 248 bits (633), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 132/346 (38%), Positives = 194/346 (56%), Gaps = 5/346 (1%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV 203
VS CG +N G H A+ +++ + +SLIS+Y++C +RVF + +
Sbjct: 326 VSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHT 385
Query: 204 VSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQ 263
W+AIIAG Q V L LF MR +++PN T SLL A L HC
Sbjct: 386 GPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCY 445
Query: 264 IIQMGFHSYLHVDNALIAMYSKCGVIDDALYIF----ENMVGRDVVTWNSMIAGYAQHGL 319
+ + GF S L L+ +YSKCG ++ A IF E +DVV W ++I+GY HG
Sbjct: 446 LTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGD 505
Query: 320 AQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEH-GVQPKLDHYS 378
A+ +F EM++ GV P+ +T+ S L++C H GLV+EG F M+EH + +HY+
Sbjct: 506 GHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYT 565
Query: 379 CIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPG 438
CIVDLLGRAG + EA + I +P P + +WG+LL++ H NV +G AA LEP
Sbjct: 566 CIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPE 625
Query: 439 CSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKS 484
+ LAN+YA++G W + +VR +M++ GL+ PG S IE++S
Sbjct: 626 NTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEIRS 671
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 140/278 (50%), Gaps = 3/278 (1%)
Query: 147 CGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSW 206
CG +DL G H L + V ++L+++Y +C +A VF+ M R+V++W
Sbjct: 228 CGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITW 287
Query: 207 TAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQ 266
T +I G+ ++ V+ LEL LM+ ++PN T SL+S C + + G+ H ++
Sbjct: 288 TCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVR 347
Query: 267 MGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISL 326
+S + ++ +LI+MY+KC +D +F W+++IAG Q+ L +A+ L
Sbjct: 348 QQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGL 407
Query: 327 FEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGR 386
F+ M ++ V+P+ T SLL + +++ + + G LD + +V + +
Sbjct: 408 FKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSK 467
Query: 387 AGLIREARDF---IENMPVCPNAVIWGSLLSSSRLHGN 421
G + A I+ + V+WG+L+S +HG+
Sbjct: 468 CGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGD 505
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 119/233 (51%), Gaps = 12/233 (5%)
Query: 146 SCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVS 205
+ G + + G+ H + + F + YV ++L+++Y A VF+ M R+V+S
Sbjct: 126 AAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVIS 185
Query: 206 WTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQII 265
W +I+G+ + ++ L +F M + ++ T S+L C L GR H +
Sbjct: 186 WNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVE 245
Query: 266 QMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAIS 325
+ + V NAL+ MY KCG +D+A ++F+ M RDV+TW MI GY + G + A+
Sbjct: 246 EKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALE 305
Query: 326 LFEEMIKQGVDPDAVTYLSLLS-----------SCRHGGLVKEGQVYFNSMVE 367
L M +GV P+AVT SL+S C HG V++ QVY + ++E
Sbjct: 306 LCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQ-QVYSDIIIE 357
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 152/297 (51%), Gaps = 6/297 (2%)
Query: 160 HCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRV 219
HC IT G ++ ++ S+L Y+ C A ++FEEMP+ +++S+ +I + +E
Sbjct: 38 HCHVITGGRVSG-HILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLY 96
Query: 220 DMCLELFHLM--RGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDN 277
+ +F M G + P+ +TY + A ++ G H +I++ F +V N
Sbjct: 97 HDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQN 156
Query: 278 ALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDP 337
AL+AMY G ++ A +F+ M RDV++WN+MI+GY ++G +A+ +F+ M+ + VD
Sbjct: 157 ALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDL 216
Query: 338 DAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFI 397
D T +S+L C H ++ G+ + E + K++ + +V++ + G + EAR
Sbjct: 217 DHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVF 276
Query: 398 ENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVG 454
+ M + + W +++ G+V +E RL+ G +A+L + G
Sbjct: 277 DRMER-RDVITWTCMINGYTEDGDVENALELC--RLMQFEGVRPNAVTIASLVSVCG 330
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 248 bits (632), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 141/352 (40%), Positives = 207/352 (58%), Gaps = 2/352 (0%)
Query: 133 LGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFI-ANVYVGSSLISLYSRCALSGDA 191
L +D L V +CG+ G H ++I FI + Y+ +S+I +Y +C L +A
Sbjct: 206 LALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNA 265
Query: 192 YRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGS 251
++FE +RNVV WT +I+GFA+ R +LF M + PN T ++L +C
Sbjct: 266 RKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSL 325
Query: 252 GALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMI 311
G+L +G+ H +I+ G + I MY++CG I A +F+ M R+V++W+SMI
Sbjct: 326 GSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMI 385
Query: 312 AGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMV-EHGV 370
+ +GL +EA+ F +M Q V P++VT++SLLS+C H G VKEG F SM ++GV
Sbjct: 386 NAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGV 445
Query: 371 QPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAE 430
P+ +HY+C+VDLLGRAG I EA+ FI+NMPV P A WG+LLS+ R+H V + E AE
Sbjct: 446 VPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAE 505
Query: 431 SRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEV 482
L +EP S+ L+N+YA G W V VR+ M KG + + G S EV
Sbjct: 506 KLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATEV 557
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 151/290 (52%), Gaps = 6/290 (2%)
Query: 134 GVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYR 193
GVD L A+ +C L G+ H LA+ G + YV SL+ +Y++ A +
Sbjct: 106 GVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQK 165
Query: 194 VFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGA 253
VF+E+P RN V W ++ G+ + + LF LMR + + + T L+ AC A
Sbjct: 166 VFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFA 225
Query: 254 LGYGRGAHCQIIQMGF---HSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSM 310
G+ H I+ F YL ++I MY KC ++D+A +FE V R+VV W ++
Sbjct: 226 GKVGKCVHGVSIRRSFIDQSDYLQA--SIIDMYVKCRLLDNARKLFETSVDRNVVMWTTL 283
Query: 311 IAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGV 370
I+G+A+ A EA LF +M+++ + P+ T ++L SC G ++ G+ M+ +G+
Sbjct: 284 ISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGI 343
Query: 371 QPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHG 420
+ +++ +D+ R G I+ AR + MP N + W S++++ ++G
Sbjct: 344 EMDAVNFTSFIDMYARCGNIQMARTVFDMMPE-RNVISWSSMINAFGING 392
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 125/270 (46%), Gaps = 8/270 (2%)
Query: 151 RDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP--ERNVVSWTA 208
+ LN Q H I GF V +GSSL + Y + A F +P +RN SW
Sbjct: 18 KTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNT 77
Query: 209 IIAGFAQEWRV---DMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQII 265
I++G+++ D+ L L++ MR + F + AC+G G L G H +
Sbjct: 78 ILSGYSKSKTCCYSDVLL-LYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAM 136
Query: 266 QMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAIS 325
+ G +V +L+ MY++ G ++ A +F+ + R+ V W ++ GY ++ E
Sbjct: 137 KNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFR 196
Query: 326 LFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHY-SCIVDLL 384
LF M G+ DA+T + L+ +C + K G+ + + D+ + I+D+
Sbjct: 197 LFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMY 256
Query: 385 GRAGLIREARDFIENMPVCPNAVIWGSLLS 414
+ L+ AR E V N V+W +L+S
Sbjct: 257 VKCRLLDNARKLFET-SVDRNVVMWTTLIS 285
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 139/399 (34%), Positives = 231/399 (57%), Gaps = 9/399 (2%)
Query: 124 EMSSVMEQEL---GVDVCFLSHA--VSSCGSKRDLNGGVQYHCLAITTGFIAN-VYVGSS 177
E + V+ QE+ GV+ ++ A V +C L G Q+H GF + Y+G S
Sbjct: 611 EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGIS 670
Query: 178 LISLYSRCALSGDAYRVFEEMPE-RNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKP 236
L+ +Y +A +F E+ +++V WT +++G +Q + L+ + MR + P
Sbjct: 671 LLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLP 730
Query: 237 NYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIF 296
+ T+ ++L C +L GR H I + N LI MY+KCG + + +F
Sbjct: 731 DQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVF 790
Query: 297 ENMVGR-DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLV 355
+ M R +VV+WNS+I GYA++G A++A+ +F+ M + + PD +T+L +L++C H G V
Sbjct: 791 DEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKV 850
Query: 356 KEGQVYFNSMV-EHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLS 414
+G+ F M+ ++G++ ++DH +C+VDLLGR G ++EA DFIE + P+A +W SLL
Sbjct: 851 SDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLG 910
Query: 415 SSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPN 474
+ R+HG+ G +AE + LEP S+ L+N+YAS G W + +RK+M+D+G+K
Sbjct: 911 ACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKV 970
Query: 475 PGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSLVDHM 513
PG SWI+V+ + H F A DKS+ + I + ++ L D M
Sbjct: 971 PGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLM 1009
Score = 175 bits (443), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 150/276 (54%), Gaps = 6/276 (2%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP 199
L +S+ G +L+ G+ H AI G +N+YVGSSL+S+YS+C A +VFE +
Sbjct: 330 LGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALE 389
Query: 200 ERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRG 259
E+N V W A+I G+A +ELF M+ S + FT+TSLLS C S L G
Sbjct: 390 EKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQ 449
Query: 260 AHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGL 319
H II+ L V NAL+ MY+KCG ++DA IFE M RD VTWN++I Y Q
Sbjct: 450 FHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDEN 509
Query: 320 AQEAISLFEEMIKQGVDPDAVTYLSLLSSCRH-GGLVKEGQVYFNSMVEHGVQPKLDHYS 378
EA LF+ M G+ D S L +C H GL + QV+ S V+ G+ L S
Sbjct: 510 ESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLS-VKCGLDRDLHTGS 568
Query: 379 CIVDLLGRAGLIREARDFIENMP----VCPNAVIWG 410
++D+ + G+I++AR ++P V NA+I G
Sbjct: 569 SLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAG 604
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 160/322 (49%), Gaps = 6/322 (1%)
Query: 102 DMLENSVINHVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHC 161
D+ N++I N + K + +D + +S+C + DL G Q+H
Sbjct: 393 DVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHS 452
Query: 162 LAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDM 221
+ I N++VG++L+ +Y++C DA ++FE M +R+ V+W II + Q+
Sbjct: 453 IIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESE 512
Query: 222 CLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIA 281
+LF M + + S L AC L G+ HC ++ G LH ++LI
Sbjct: 513 AFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLID 572
Query: 282 MYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVT 341
MYSKCG+I DA +F ++ VV+ N++IAGY+Q+ L +EA+ LF+EM+ +GV+P +T
Sbjct: 573 MYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEIT 631
Query: 342 YLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLG---RAGLIREARDFIE 398
+ +++ +C + G + + + G + ++ + LLG + + EA
Sbjct: 632 FATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLG--ISLLGMYMNSRGMTEACALFS 689
Query: 399 NMPVCPNAVIWGSLLSSSRLHG 420
+ + V+W ++S +G
Sbjct: 690 ELSSPKSIVLWTGMMSGHSQNG 711
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 127/239 (53%), Gaps = 1/239 (0%)
Query: 177 SLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKP 236
++I+ Y R DA +F EM +VV+W +I+G + + +E F MR S +K
Sbjct: 266 TVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKS 325
Query: 237 NYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIF 296
T S+LSA L G H + I++G S ++V ++L++MYSKC ++ A +F
Sbjct: 326 TRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVF 385
Query: 297 ENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVK 356
E + ++ V WN+MI GYA +G + + + LF +M G + D T+ SLLS+C ++
Sbjct: 386 EALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLE 445
Query: 357 EGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSS 415
G + + +++ + L + +VD+ + G + +AR E M N V W +++ S
Sbjct: 446 MGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDN-VTWNTIIGS 503
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 145/274 (52%), Gaps = 8/274 (2%)
Query: 156 GVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQ 215
G H ++ G + +G++++ LY++CA A + F+ + E++V +W ++++ ++
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSS 137
Query: 216 EWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHV 275
+ L F + +++ PN FT++ +LS C + +GR HC +I+MG +
Sbjct: 138 IGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYC 197
Query: 276 DNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGV 335
AL+ MY+KC I DA +FE +V + V W + +GY + GL +EA+ +FE M +G
Sbjct: 198 GGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGH 257
Query: 336 DPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARD 395
PD + +++++++ G +K+ ++ F M P + ++ ++ G+ G A +
Sbjct: 258 RPDHLAFVTVINTYIRLGKLKDARLLFGEM----SSPDVVAWNVMISGHGKRGCETVAIE 313
Query: 396 FIENM---PVCPNAVIWGSLLSSSRLHGNVWIGI 426
+ NM V GS+LS+ + N+ +G+
Sbjct: 314 YFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGL 347
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 126/308 (40%), Gaps = 36/308 (11%)
Query: 106 NSVINHVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAIT 165
NS+++ S K S+ E ++ + S +S+C + ++ G Q HC I
Sbjct: 129 NSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIK 188
Query: 166 TGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLEL 225
G N Y G +L+ +Y++C DA RVFE + + N V WT + +G+ + + + +
Sbjct: 189 MGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLV 248
Query: 226 FHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSK 285
F MR +P++ + ++++ Y +
Sbjct: 249 FERMRDEGHRPDHLAFVTVINT-----------------------------------YIR 273
Query: 286 CGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSL 345
G + DA +F M DVV WN MI+G+ + G AI F M K V T S+
Sbjct: 274 LGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSV 333
Query: 346 LSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPN 405
LS+ + G V ++ G+ + S +V + + + A E + N
Sbjct: 334 LSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEE-KN 392
Query: 406 AVIWGSLL 413
V W +++
Sbjct: 393 DVFWNAMI 400
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 81/162 (50%), Gaps = 2/162 (1%)
Query: 253 ALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIA 312
AL G+ H + + +G S + NA++ +Y+KC + A F + + +DV WNSM++
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQF-DFLEKDVTAWNSMLS 133
Query: 313 GYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQP 372
Y+ G + + F + + + P+ T+ +LS+C V+ G+ SM++ G++
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 373 KLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLS 414
+VD+ + I +AR E + V PN V W L S
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWI-VDPNTVCWTCLFS 234
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 134/385 (34%), Positives = 217/385 (56%), Gaps = 3/385 (0%)
Query: 132 ELGV--DVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSG 189
E+GV D F+ +S+C DL+ G N +V ++L++LY++C
Sbjct: 205 EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKME 264
Query: 190 DAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACM 249
A VF+ M E+++V+W+ +I G+A +ELF M +KP+ F+ LS+C
Sbjct: 265 KARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCA 324
Query: 250 GSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNS 309
GAL G I + F + L + NALI MY+KCG + +F+ M +D+V N+
Sbjct: 325 SLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNA 384
Query: 310 MIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSM-VEH 368
I+G A++G + + ++F + K G+ PD T+L LL C H GL+++G +FN++ +
Sbjct: 385 AISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVY 444
Query: 369 GVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEA 428
++ ++HY C+VDL GRAG++ +A I +MP+ PNA++WG+LLS RL + +
Sbjct: 445 ALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETV 504
Query: 429 AESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHR 488
+ + LEP + QL+N+Y+ G W++ A VR +M KG+K PG SWIE++ KVH
Sbjct: 505 LKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHE 564
Query: 489 FEAQDKSNRRMSDILLVIDSLVDHM 513
F A DKS+ I ++ L + M
Sbjct: 565 FLADDKSHPLSDKIYAKLEDLGNEM 589
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 159/320 (49%), Gaps = 4/320 (1%)
Query: 95 SHLRLIEDMLENSVINHVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLN 154
SH + L NS+IN +N +T S+ + L + + +C
Sbjct: 69 SHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRK 128
Query: 155 GGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFA 214
G+ H L + GF +V +SL+S+YS DA+++F+E+P+R+VV+WTA+ +G+
Sbjct: 129 LGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYT 188
Query: 215 QEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLH 274
R ++LF M +KP+ + +LSAC+ G L G + +M
Sbjct: 189 TSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSF 248
Query: 275 VDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQG 334
V L+ +Y+KCG ++ A +F++MV +D+VTW++MI GYA + +E I LF +M+++
Sbjct: 249 VRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQEN 308
Query: 335 VDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREAR 394
+ PD + + LSSC G + G+ + + H L + ++D+ + G +
Sbjct: 309 LKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGF 368
Query: 395 DFIENMP----VCPNAVIWG 410
+ + M V NA I G
Sbjct: 369 EVFKEMKEKDIVIMNAAISG 388
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 117/223 (52%), Gaps = 1/223 (0%)
Query: 191 AYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMG 250
+Y +F N+ + ++I GF L+LF +R + + FT+ +L AC
Sbjct: 64 SYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTR 123
Query: 251 SGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSM 310
+ + G H +++ GF+ + +L+++YS G ++DA +F+ + R VVTW ++
Sbjct: 124 ASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTAL 183
Query: 311 IAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGV 370
+GY G +EAI LF++M++ GV PD+ + +LS+C H G + G+ M E +
Sbjct: 184 FSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEM 243
Query: 371 QPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLL 413
Q + +V+L + G + +AR ++M V + V W +++
Sbjct: 244 QKNSFVRTTLVNLYAKCGKMEKARSVFDSM-VEKDIVTWSTMI 285
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 126/331 (38%), Positives = 204/331 (61%), Gaps = 2/331 (0%)
Query: 168 FIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFH 227
F+ ++ +G++++ +Y++ L A VF +P +V+SW II+G+AQ +E+++
Sbjct: 380 FLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYN 439
Query: 228 LMRG-SEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKC 286
+M E+ N T+ S+L AC +GAL G H ++++ G + + V +L MY KC
Sbjct: 440 IMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKC 499
Query: 287 GVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLL 346
G ++DAL +F + + V WN++IA + HG ++A+ LF+EM+ +GV PD +T+++LL
Sbjct: 500 GRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLL 559
Query: 347 SSCRHGGLVKEGQVYFNSM-VEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPN 405
S+C H GLV EGQ F M ++G+ P L HY C+VD+ GRAG + A FI++M + P+
Sbjct: 560 SACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPD 619
Query: 406 AVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKL 465
A IWG+LLS+ R+HGNV +G A+E +EP L+N+YAS G W V +R +
Sbjct: 620 ASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSI 679
Query: 466 MKDKGLKPNPGSSWIEVKSKVHRFEAQDKSN 496
KGL+ PG S +EV +KV F ++++
Sbjct: 680 AHGKGLRKTPGWSSMEVDNKVEVFYTGNQTH 710
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 149/280 (53%), Gaps = 3/280 (1%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV 203
+S+C D N GV H +I G + ++V + LI LY+ D +VF+ M R++
Sbjct: 254 LSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDL 313
Query: 204 VSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQ 263
+SW +II + + + LF MR S ++P+ T SL S G + R
Sbjct: 314 ISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGF 373
Query: 264 IIQMG-FHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQE 322
++ G F + + NA++ MY+K G++D A +F + DV++WN++I+GYAQ+G A E
Sbjct: 374 TLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASE 433
Query: 323 AISLFEEMIKQG-VDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIV 381
AI ++ M ++G + + T++S+L +C G +++G ++++G+ + + +
Sbjct: 434 AIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLA 493
Query: 382 DLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGN 421
D+ G+ G + +A +P N+V W +L++ HG+
Sbjct: 494 DMYGKCGRLEDALSLFYQIPRV-NSVPWNTLIACHGFHGH 532
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/278 (32%), Positives = 141/278 (50%), Gaps = 6/278 (2%)
Query: 151 RDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAII 210
R + G + HCLA+ GF+ +VYV +SLI LYSR G+A +F+EMP R++ SW A+I
Sbjct: 164 RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMI 223
Query: 211 AGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFH 270
+G+ Q L L + +R + T SLLSAC +G G H I+ G
Sbjct: 224 SGYCQSGNAKEALTLSNGLRAMDS----VTVVSLLSACTEAGDFNRGVTIHSYSIKHGLE 279
Query: 271 SYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEM 330
S L V N LI +Y++ G + D +F+ M RD+++WNS+I Y + AISLF+EM
Sbjct: 280 SELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEM 339
Query: 331 IKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHG-VQPKLDHYSCIVDLLGRAGL 389
+ PD +T +SL S G ++ + + G + + +V + + GL
Sbjct: 340 RLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGL 399
Query: 390 IREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIE 427
+ AR +P + + W +++S +G IE
Sbjct: 400 VDSARAVFNWLP-NTDVISWNTIISGYAQNGFASEAIE 436
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 152/300 (50%), Gaps = 16/300 (5%)
Query: 160 HCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEW-- 217
H + + I NV + + L++LY A F+ + R+V +W +I+G+ +
Sbjct: 74 HARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNS 133
Query: 218 -RVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVD 276
V C LF L G + P+Y T+ S+L AC + G HC ++ GF ++V
Sbjct: 134 SEVIRCFSLFMLSSG--LTPDYRTFPSVLKACR---TVIDGNKIHCLALKFGFMWDVYVA 188
Query: 277 NALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVD 336
+LI +YS+ + +A +F+ M RD+ +WN+MI+GY Q G A+EA++L +
Sbjct: 189 ASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM--- 245
Query: 337 PDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDF 396
D+VT +SLLS+C G G + ++HG++ +L + ++DL G +R+ +
Sbjct: 246 -DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKV 304
Query: 397 IENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLL--LEPGCSATLQQLANLYASVG 454
+ M V + + W S++ + L+ I + L ++P C TL LA++ + +G
Sbjct: 305 FDRMYV-RDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDC-LTLISLASILSQLG 362
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 122/324 (37%), Positives = 196/324 (60%), Gaps = 1/324 (0%)
Query: 194 VFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGA 253
+F +M ++++VSW +I + + +EL+ M +P+ + TS+L AC + A
Sbjct: 265 MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSA 324
Query: 254 LGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAG 313
L G+ H I + L ++NALI MY+KCG ++ A +FENM RDVV+W +MI+
Sbjct: 325 LSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISA 384
Query: 314 YAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEH-GVQP 372
Y G +A++LF ++ G+ PD++ +++ L++C H GL++EG+ F M +H + P
Sbjct: 385 YGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITP 444
Query: 373 KLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESR 432
+L+H +C+VDLLGRAG ++EA FI++M + PN +WG+LL + R+H + IG+ AA+
Sbjct: 445 RLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKL 504
Query: 433 LLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQ 492
L P S L+N+YA G W +V +R +MK KGLK NPG+S +EV +H F
Sbjct: 505 FQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVG 564
Query: 493 DKSNRRMSDILLVIDSLVDHMSSL 516
D+S+ + +I +D LV M L
Sbjct: 565 DRSHPQSDEIYRELDVLVKKMKEL 588
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 149/325 (45%), Gaps = 24/325 (7%)
Query: 160 HCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRV 219
H I N +G L+ Y+ A +VF+E+PERNV+ +I +
Sbjct: 62 HSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFY 121
Query: 220 DMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNAL 279
+++F M G ++P+++T+ +L AC SG + GR H ++G S L V N L
Sbjct: 122 GEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGL 181
Query: 280 IAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDA 339
++MY KCG + +A + + M RDVV+WNS++ GYAQ+ +A+ + EM + DA
Sbjct: 182 VSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDA 241
Query: 340 VTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIEN 399
T SLL + + E +Y M + L ++ ++ + + + EA +
Sbjct: 242 GTMASLLPAVSN--TTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSR 299
Query: 400 MPVC---PNAVIWGSLLSS----------SRLHGNVWIGIEAAESRLLLEPGCSATLQQL 446
M P+AV S+L + ++HG +I + LLLE L
Sbjct: 300 MEADGFEPDAVSITSVLPACGDTSALSLGKKIHG--YIERKKLIPNLLLE-------NAL 350
Query: 447 ANLYASVGWWNQVARVRKLMKDKGL 471
++YA G + V + MK + +
Sbjct: 351 IDMYAKCGCLEKARDVFENMKSRDV 375
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 121/265 (45%), Gaps = 34/265 (12%)
Query: 156 GVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQ 215
G + H A G + ++VG+ L+S+Y +C +A V +EM R+VVSW +++ G+AQ
Sbjct: 159 GRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQ 218
Query: 216 EWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHV 275
R D LE+ M ++ + T SLL A S
Sbjct: 219 NQRFDDALEVCREMESVKISHDAGTMASLLPAV----------------------SNTTT 256
Query: 276 DNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGV 335
+N MY K +F M + +V+WN MI Y ++ + EA+ L+ M G
Sbjct: 257 EN---VMYVK--------DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGF 305
Query: 336 DPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARD 395
+PDAV+ S+L +C + G+ + + P L + ++D+ + G + +ARD
Sbjct: 306 EPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARD 365
Query: 396 FIENMPVCPNAVIWGSLLSSSRLHG 420
ENM + V W +++S+ G
Sbjct: 366 VFENMK-SRDVVSWTAMISAYGFSG 389
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 1/137 (0%)
Query: 123 TEMSSVMEQE-LGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISL 181
E+ S ME + D ++ + +CG L+ G + H I N+ + ++LI +
Sbjct: 294 VELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDM 353
Query: 182 YSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTY 241
Y++C A VFE M R+VVSWTA+I+ + R + LF ++ S + P+ +
Sbjct: 354 YAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAF 413
Query: 242 TSLLSACMGSGALGYGR 258
+ L+AC +G L GR
Sbjct: 414 VTTLAACSHAGLLEEGR 430
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 128/360 (35%), Positives = 216/360 (60%), Gaps = 9/360 (2%)
Query: 156 GVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQ 215
G++ H L I TGF++ VG+S I+LY++ DA + FE++ R ++SW A+I+GFAQ
Sbjct: 391 GLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQ 450
Query: 216 EWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQ--IIQMGFHSYL 273
L++F L +E PN +T+ S+L+A + + +G C ++++G +S
Sbjct: 451 NGFSHEALKMF-LSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCP 509
Query: 274 HVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQ 333
V +AL+ MY+K G ID++ +F M ++ W S+I+ Y+ HG + ++LF +MIK+
Sbjct: 510 VVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKE 569
Query: 334 GVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE-HGVQPKLDHYSCIVDLLGRAGLIRE 392
V PD VT+LS+L++C G+V +G FN M+E + ++P +HYSC+VD+LGRAG ++E
Sbjct: 570 NVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKE 629
Query: 393 ARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYAS 452
A + + +P P + S+L S RLHGNV +G + AE + ++P S + Q+ N+YA
Sbjct: 630 AEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAE 689
Query: 453 VGWWNQVARVRKLMKDKGLKPNPGSSWIEVKS-----KVHRFEAQDKSNRRMSDILLVID 507
W++ A +RK M+ K + G SWI+V + F + DKS+ + +I +++
Sbjct: 690 KEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVE 749
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 154/296 (52%), Gaps = 9/296 (3%)
Query: 128 VMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCAL 187
+M + + +D + +++C + DL Q H L I G+ + + VG+ L+S YS+C +
Sbjct: 267 MMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGV 326
Query: 188 SGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSA 247
VF +M ERNVVSWT +I+ D + +F MR + PN T+ L++A
Sbjct: 327 LEAVKSVFHQMSERNVVSWTTMISS-----NKDDAVSIFLNMRFDGVYPNEVTFVGLINA 381
Query: 248 CMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTW 307
+ + G H I+ GF S V N+ I +Y+K ++DA FE++ R++++W
Sbjct: 382 VKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISW 441
Query: 308 NSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGG--LVKEGQVYFNSM 365
N+MI+G+AQ+G + EA+ +F + + P+ T+ S+L++ VK+GQ +
Sbjct: 442 NAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHL 500
Query: 366 VEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGN 421
++ G+ S ++D+ + G I E+ M N +W S++S+ HG+
Sbjct: 501 LKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQ-KNQFVWTSIISAYSSHGD 555
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 151/284 (53%), Gaps = 7/284 (2%)
Query: 135 VDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRV 194
+D L A+ +C + DL G Q H + T+GF + V V ++++ +Y + +A +
Sbjct: 76 MDEVTLCLALKAC--RGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCI 133
Query: 195 FEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGAL 254
FE + + +VVSW I++GF + L M+ + + + FTY++ LS C+GS
Sbjct: 134 FENLVDPDVVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGF 190
Query: 255 GYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGY 314
G +++ G S L V N+ I MYS+ G A +F+ M +D+++WNS+++G
Sbjct: 191 LLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGL 250
Query: 315 AQHG-LAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPK 373
+Q G EA+ +F +M+++GV+ D V++ S++++C H +K + ++ G +
Sbjct: 251 SQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESL 310
Query: 374 LDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSR 417
L+ + ++ + G++ + M N V W +++SS++
Sbjct: 311 LEVGNILMSRYSKCGVLEAVKSVFHQMSE-RNVVSWTTMISSNK 353
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 138/415 (33%), Positives = 228/415 (54%), Gaps = 40/415 (9%)
Query: 136 DVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVF 195
D S V +C + ++ G Q HC I + + + V SSL+ +Y++C L A VF
Sbjct: 104 DDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVF 163
Query: 196 EEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLM-------------------RG----- 231
+ + +N +SWTA+++G+A+ R + LELF ++ +G
Sbjct: 164 DSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFS 223
Query: 232 --SEMKP------NYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMY 283
+EM+ + +S++ AC A GR H +I +GF S + + NALI MY
Sbjct: 224 VFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMY 283
Query: 284 SKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYL 343
+KC + A IF M RDVV+W S+I G AQHG A++A++L+++M+ GV P+ VT++
Sbjct: 284 AKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFV 343
Query: 344 SLLSSCRHGGLVKEGQVYFNSMV-EHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPV 402
L+ +C H G V++G+ F SM ++G++P L HY+C++DLLGR+GL+ EA + I MP
Sbjct: 344 GLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPF 403
Query: 403 CPNAVIWGSLLSSSRLHGNVWIGIEAAE----SRLLLEPGCSATLQQLANLYASVGWWNQ 458
P+ W +LLS+ + G +GI A+ S L +P +T L+N+YAS W +
Sbjct: 404 PPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDP---STYILLSNIYASASLWGK 460
Query: 459 VARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSLVDHM 513
V+ R+ + + ++ +PG S +EV+ + F A + S+ DI ++ L + M
Sbjct: 461 VSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEM 515
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 105/187 (56%), Gaps = 1/187 (0%)
Query: 142 HAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPER 201
H + C R L H + G + + ++L+++Y +C + A +VF+EMP R
Sbjct: 8 HQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHR 67
Query: 202 NVVSWTAIIAGFAQEWRVDMCLELFHLMRGSE-MKPNYFTYTSLLSACMGSGALGYGRGA 260
+ ++W +++ Q L +F + S ++P+ F +++L+ AC G++ +GR
Sbjct: 68 DHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQV 127
Query: 261 HCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLA 320
HC I + + V ++L+ MY+KCG+++ A +F+++ ++ ++W +M++GYA+ G
Sbjct: 128 HCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRK 187
Query: 321 QEAISLF 327
+EA+ LF
Sbjct: 188 EEALELF 194
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 109/235 (46%), Gaps = 4/235 (1%)
Query: 113 GSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANV 172
G L TEM E+ +D LS V +C + G Q H L I GF + V
Sbjct: 216 GKGLEAFSVFTEMRR--ERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCV 273
Query: 173 YVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGS 232
++ ++LI +Y++C+ A +F M R+VVSWT++I G AQ + + L L+ M
Sbjct: 274 FISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSH 333
Query: 233 EMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQ-MGFHSYLHVDNALIAMYSKCGVIDD 291
+KPN T+ L+ AC G + GR + + G L L+ + + G++D+
Sbjct: 334 GVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDE 393
Query: 292 ALYIFENM-VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSL 345
A + M D TW ++++ + G Q I + + ++ D TY+ L
Sbjct: 394 AENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILL 448
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 83/176 (47%), Gaps = 4/176 (2%)
Query: 241 YTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMV 300
Y L C + L + H I+++G + N L+ +Y KCG AL +F+ M
Sbjct: 6 YLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMP 65
Query: 301 GRDVVTWNSMIAGYAQHGLAQEAI-SLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEG- 358
RD + W S++ Q L+ + + G+ PD + +L+ +C + G + G
Sbjct: 66 HRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGR 125
Query: 359 QVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLS 414
QV+ + +V ++ S +VD+ + GL+ A+ +++ V N + W +++S
Sbjct: 126 QVHCHFIVSEYANDEVVK-SSLVDMYAKCGLLNSAKAVFDSIRV-KNTISWTAMVS 179
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 142/367 (38%), Positives = 218/367 (59%), Gaps = 10/367 (2%)
Query: 119 LKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSL 178
L T ++M +E L VC L S G L+ G H L + + ++ G++L
Sbjct: 192 LDTFSKMD--VEPNLATYVCVLV----SSGRVGCLSLGKGIHGLILKRASLISLETGNAL 245
Query: 179 ISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSE-MKPN 237
I +Y +C DA RVF E+ +++ VSW ++I+G R ++LF LM+ S +KP+
Sbjct: 246 IDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPD 305
Query: 238 YFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFE 297
TS+LSAC GA+ +GR H I+ G H+ A++ MY+KCG I+ AL IF
Sbjct: 306 GHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFN 365
Query: 298 NMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKE 357
+ ++V TWN+++ G A HG E++ FEEM+K G P+ VT+L+ L++C H GLV E
Sbjct: 366 GIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDE 425
Query: 358 GQVYFNSMV--EHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSS 415
G+ YF+ M E+ + PKL+HY C++DLL RAGL+ EA + ++ MPV P+ I G++LS+
Sbjct: 426 GRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSA 485
Query: 416 SRLHGNVW-IGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPN 474
+ G + + E +S L +E S L+N++A+ W+ VAR+R+LMK KG+
Sbjct: 486 CKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKV 545
Query: 475 PGSSWIE 481
PGSS+IE
Sbjct: 546 PGSSYIE 552
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 95/277 (34%), Positives = 139/277 (50%), Gaps = 5/277 (1%)
Query: 146 SCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVS 205
+CG + G Q H + GF ++YV +SL+ Y C S +A +VF EMP R+VVS
Sbjct: 115 ACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVS 174
Query: 206 WTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQII 265
WT II GF + L+ F M +++PN TY +L + G L G+G H I+
Sbjct: 175 WTGIITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLIL 231
Query: 266 QMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAIS 325
+ L NALI MY KC + DA+ +F + +D V+WNSMI+G ++EAI
Sbjct: 232 KRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAID 291
Query: 326 LFEEM-IKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLL 384
LF M G+ PD S+LS+C G V G+ ++ G++ + IVD+
Sbjct: 292 LFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMY 351
Query: 385 GRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGN 421
+ G I A + I N N W +LL +HG+
Sbjct: 352 AKCGYIETALE-IFNGIRSKNVFTWNALLGGLAIHGH 387
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 89/179 (49%), Gaps = 4/179 (2%)
Query: 236 PNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYI 295
P+ FT+ + AC + G+ H + +MGF+ ++V N+L+ Y CG +A +
Sbjct: 104 PDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKV 163
Query: 296 FENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLV 355
F M RDVV+W +I G+ + GL +EA+ F +M V+P+ TY+ +L S G +
Sbjct: 164 FGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCL 220
Query: 356 KEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLS 414
G+ +++ L+ + ++D+ + + +A + + V W S++S
Sbjct: 221 SLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEK-KDKVSWNSMIS 278
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 246 bits (627), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 128/367 (34%), Positives = 208/367 (56%), Gaps = 1/367 (0%)
Query: 151 RDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAII 210
RDLN +Q H + GF A V +LI++Y +C A RVF++ +N+ T I+
Sbjct: 251 RDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIM 310
Query: 211 AGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFH 270
+ Q+ + L LF M E+ PN +T+ LL++ L G H +++ G+
Sbjct: 311 DAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYR 370
Query: 271 SYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEM 330
+++ V NAL+ MY+K G I+DA F M RD+VTWN+MI+G + HGL +EA+ F+ M
Sbjct: 371 NHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRM 430
Query: 331 IKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNS-MVEHGVQPKLDHYSCIVDLLGRAGL 389
I G P+ +T++ +L +C H G V++G YFN M + VQP + HY+CIV LL +AG+
Sbjct: 431 IFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGM 490
Query: 390 IREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANL 449
++A DF+ P+ + V W +LL++ + N +G + AE + P S L+N+
Sbjct: 491 FKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNI 550
Query: 450 YASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSL 509
+A W VA+VR LM ++G+K PG SWI ++++ H F A+D + ++ I + +
Sbjct: 551 HAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEV 610
Query: 510 VDHMSSL 516
+ + L
Sbjct: 611 MSKIKPL 617
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 145/287 (50%), Gaps = 4/287 (1%)
Query: 145 SSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVV 204
SC + + G Q+H + G I++ +V ++L+ +YS C+ +G+A RV +++P ++
Sbjct: 144 KSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLS 203
Query: 205 SWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQI 264
+++ ++G+ + L++ + N TY S L L H ++
Sbjct: 204 VFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRM 263
Query: 265 IQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAI 324
++ GF++ + ALI MY KCG + A +F++ +++ +++ Y Q +EA+
Sbjct: 264 VRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEAL 323
Query: 325 SLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLL 384
+LF +M + V P+ T+ LL+S L+K+G + +++ G + + + +V++
Sbjct: 324 NLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMY 383
Query: 385 GRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAES 431
++G I +AR M + V W +++S HG +G EA E+
Sbjct: 384 AKSGSIEDARKAFSGMTF-RDIVTWNTMISGCSHHG---LGREALEA 426
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 132/267 (49%), Gaps = 10/267 (3%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTG---FIANVYVGSSLISLYSRCALSGDAYRVFE 196
L+ + C + L G H I T + Y +SLI+LY +C + A ++F+
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93
Query: 197 EMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGS-EMKPNYFTYTSLLSACMGSGALG 255
MPERNVVSW A++ G+ L+LF M S E +PN F T + +C SG +
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIE 153
Query: 256 YGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYA 315
G+ H ++ G S+ V N L+ MYS C +A+ + +++ D+ ++S ++GY
Sbjct: 154 EGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYL 213
Query: 316 QHGLAQEAISLFEEMIKQGVDPDAVTYLS---LLSSCRHGGLVKEGQVYFNSMVEHGVQP 372
+ G +E + + + + + +TYLS L S+ R L QV+ + MV G
Sbjct: 214 ECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLAL--QVH-SRMVRFGFNA 270
Query: 373 KLDHYSCIVDLLGRAGLIREARDFIEN 399
+++ ++++ G+ G + A+ ++
Sbjct: 271 EVEACGALINMYGKCGKVLYAQRVFDD 297
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 246 bits (627), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 132/331 (39%), Positives = 192/331 (58%), Gaps = 3/331 (0%)
Query: 152 DLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIA 211
D G + H +A+ GF+ + + S I+LY + +A +VF+E PER + SW AII
Sbjct: 132 DFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIG 191
Query: 212 GFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFH- 270
G R + +E+F M+ S ++P+ FT S+ ++C G G L H ++Q
Sbjct: 192 GLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEE 251
Query: 271 -SYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEE 329
S + + N+LI MY KCG +D A +IFE M R+VV+W+SMI GYA +G EA+ F +
Sbjct: 252 KSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQ 311
Query: 330 MIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSM-VEHGVQPKLDHYSCIVDLLGRAG 388
M + GV P+ +T++ +LS+C HGGLV+EG+ YF M E ++P L HY CIVDLL R G
Sbjct: 312 MREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDG 371
Query: 389 LIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLAN 448
++EA+ +E MP+ PN ++WG L+ G+V + A + LEP LAN
Sbjct: 372 QLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLAN 431
Query: 449 LYASVGWWNQVARVRKLMKDKGLKPNPGSSW 479
+YA G W V RVRKLMK K + P S+
Sbjct: 432 VYALRGMWKDVERVRKLMKTKKVAKIPAYSY 462
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 244 bits (624), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 127/379 (33%), Positives = 212/379 (55%), Gaps = 7/379 (1%)
Query: 156 GVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQ 215
G + H + G ++ + SSL+ +Y +C +A +F+++ E++VVSWT++I + +
Sbjct: 237 GKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFK 296
Query: 216 EWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHV 275
R LF + GS +PN +T+ +L+AC G+ H + ++GF Y
Sbjct: 297 SSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFA 356
Query: 276 DNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGV 335
++L+ MY+KCG I+ A ++ + D+V+W S+I G AQ+G EA+ F+ ++K G
Sbjct: 357 SSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGT 416
Query: 336 DPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE-HGVQPKLDHYSCIVDLLGRAGLIREAR 394
PD VT++++LS+C H GLV++G +F S+ E H + DHY+C+VDLL R+G + +
Sbjct: 417 KPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLK 476
Query: 395 DFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVG 454
I MP+ P+ +W S+L +GN+ + EAA+ +EP T +AN+YA+ G
Sbjct: 477 SVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAG 536
Query: 455 WWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSLVDHMS 514
W + ++RK M++ G+ PGSSW E+K K H F A D S+ + I+ + L M
Sbjct: 537 KWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMK 596
Query: 515 ------SLSLQSHMYEEEN 527
+ SL H E+E
Sbjct: 597 EEGYVPATSLVLHDVEDEQ 615
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 145/310 (46%), Gaps = 33/310 (10%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV 203
+ C R L G + H T+GF+ + + + L+ +Y++C DA +VF+EMP R++
Sbjct: 92 IQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDL 151
Query: 204 VSW-------------------------------TAIIAGFAQEWRVDMCLELFHLM-RG 231
SW TA++ G+ ++ + + L L+ LM R
Sbjct: 152 CSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRV 211
Query: 232 SEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDD 291
+PN FT + ++A + G+ H I++ G S + ++L+ MY KCG ID+
Sbjct: 212 PNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDE 271
Query: 292 ALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRH 351
A IF+ +V +DVV+W SMI Y + +E SLF E++ P+ T+ +L++C
Sbjct: 272 ARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACAD 331
Query: 352 GGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGS 411
+ G+ M G P S +VD+ + G I A+ ++ P P+ V W S
Sbjct: 332 LTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPK-PDLVSWTS 390
Query: 412 LLSSSRLHGN 421
L+ +G
Sbjct: 391 LIGGCAQNGQ 400
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 33/215 (15%)
Query: 231 GSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVID 290
G KP TY +L+ C + AL G+ H I GF + + N L+ MY+KCG +
Sbjct: 78 GRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLV 137
Query: 291 DALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEM---------------IKQGV 335
DA +F+ M RD+ +WN M+ GYA+ GL +EA LF+EM +K+
Sbjct: 138 DARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQ 197
Query: 336 DPDAVTYLSLLSSCRHG-----------------GLVKEGQVYFNSMVEHGVQPKLDHYS 378
+A+ SL+ + ++ G+ +V G+ +S
Sbjct: 198 PEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWS 257
Query: 379 CIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLL 413
++D+ G+ G I EAR+ + + V + V W S++
Sbjct: 258 SLMDMYGKCGCIDEARNIFDKI-VEKDVVSWTSMI 291
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 244 bits (624), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 141/399 (35%), Positives = 216/399 (54%), Gaps = 7/399 (1%)
Query: 86 SASDIENRRSHLRLIEDMLENSVINHVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAVS 145
+A + N SH+ L+ H GS L +M V E+ + ++ +S
Sbjct: 295 NARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGV---EIKPNCVTIASVLS 351
Query: 146 SCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVS 205
CG +L G H L+I G I + V ++L+ +Y++C + DA VFE E+++V+
Sbjct: 352 GCGLIENLELGRSVHGLSIKVG-IWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVA 410
Query: 206 WTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQII 265
W +II+GF+Q + L LFH M + PN T SL SAC G+L G H +
Sbjct: 411 WNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSV 470
Query: 266 QMGF--HSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEA 323
++GF S +HV AL+ Y+KCG A IF+ + ++ +TW++MI GY + G +
Sbjct: 471 KLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGS 530
Query: 324 ISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMV-EHGVQPKLDHYSCIVD 382
+ LFEEM+K+ P+ T+ S+LS+C H G+V EG+ YF+SM ++ P HY+C+VD
Sbjct: 531 LELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVD 590
Query: 383 LLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSAT 442
+L RAG + +A D IE MP+ P+ +G+ L +H +G + L L P ++
Sbjct: 591 MLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASY 650
Query: 443 LQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIE 481
++NLYAS G WNQ VR LMK +GL G S +E
Sbjct: 651 YVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 155/300 (51%), Gaps = 13/300 (4%)
Query: 128 VMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCAL 187
+M+ D S A+ +C +DL+ G + HC + NV V + L+ +Y++C
Sbjct: 133 LMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNV-VLTGLLDMYAKCGE 191
Query: 188 SGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSA 247
A++VF ++ RNVV WT++IAG+ + + L LF+ MR + + N +TY +L+ A
Sbjct: 192 IKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMA 251
Query: 248 CMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTW 307
C AL G+ H +++ G + +L+ MY KCG I +A +F D+V W
Sbjct: 252 CTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMW 311
Query: 308 NSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE 367
+MI GY +G EA+SLF++M + P+ VT S+LS C GL++ ++
Sbjct: 312 TAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGC---GLIENLEL---GRSV 365
Query: 368 HGVQPKLDHY-----SCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNV 422
HG+ K+ + + +V + + R+A+ ++ M + V W S++S +G++
Sbjct: 366 HGLSIKVGIWDTNVANALVHMYAKCYQNRDAK-YVFEMESEKDIVAWNSIISGFSQNGSI 424
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 142/286 (49%), Gaps = 9/286 (3%)
Query: 138 CFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEE 197
CFL +S C + L Q H + G + ++ + + L+SLY + DA VF++
Sbjct: 47 CFL--LLSKCTNIDSLR---QSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQ 101
Query: 198 MPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYG 257
+PE + W ++ + ++L+ L+ + + ++ L AC L G
Sbjct: 102 IPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNG 161
Query: 258 RGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQH 317
+ HCQ++++ + V L+ MY+KCG I A +F ++ R+VV W SMIAGY ++
Sbjct: 162 KKIHCQLVKVPSFDNV-VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKN 220
Query: 318 GLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHY 377
L +E + LF M + V + TY +L+ +C + +G+ + +V+ G++
Sbjct: 221 DLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLV 280
Query: 378 SCIVDLLGRAGLIREARD-FIENMPVCPNAVIWGSLLSSSRLHGNV 422
+ ++D+ + G I AR F E+ V + V+W +++ +G+V
Sbjct: 281 TSLLDMYVKCGDISNARRVFNEHSHV--DLVMWTAMIVGYTHNGSV 324
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 244 bits (624), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 131/405 (32%), Positives = 222/405 (54%), Gaps = 1/405 (0%)
Query: 106 NSVINHVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAIT 165
N++I+ +N + E + VD + V C L G H +
Sbjct: 125 NALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVK 184
Query: 166 TGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLEL 225
G + V V +S I++Y +C R+F+EMP + +++W A+I+G++Q LEL
Sbjct: 185 GGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLEL 244
Query: 226 FHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSK 285
+ M+ S + P+ FT S+LS+C GA G + GF + V NA I+MY++
Sbjct: 245 YEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYAR 304
Query: 286 CGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSL 345
CG + A +F+ M + +V+W +MI Y HG+ + + LF++MIK+G+ PD ++ +
Sbjct: 305 CGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMV 364
Query: 346 LSSCRHGGLVKEGQVYFNSMV-EHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCP 404
LS+C H GL +G F +M E+ ++P +HYSC+VDLLGRAG + EA +FIE+MPV P
Sbjct: 365 LSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEP 424
Query: 405 NAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRK 464
+ +WG+LL + ++H NV + A + EP ++N+Y+ + R+R
Sbjct: 425 DGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRV 484
Query: 465 LMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSL 509
+M+++ + PG S++E K +VH F A D+S+ + ++ ++D L
Sbjct: 485 MMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDEL 529
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 149/285 (52%), Gaps = 3/285 (1%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV 203
+ SC S G Q HC G +V ++LIS+Y +C L DA +VFEE P+ +
Sbjct: 60 LKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQ 119
Query: 204 VS--WTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAH 261
+S + A+I+G+ +V +F M+ + + + T L+ C L GR H
Sbjct: 120 LSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLH 179
Query: 262 CQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQ 321
Q ++ G S + V N+ I MY KCG ++ +F+ M + ++TWN++I+GY+Q+GLA
Sbjct: 180 GQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAY 239
Query: 322 EAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIV 381
+ + L+E+M GV PD T +S+LSSC H G K G + +G P + + +
Sbjct: 240 DVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASI 299
Query: 382 DLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGI 426
+ R G + +AR + MPV + V W +++ +HG IG+
Sbjct: 300 SMYARCGNLAKARAVFDIMPV-KSLVSWTAMIGCYGMHGMGEIGL 343
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 121/275 (44%), Gaps = 10/275 (3%)
Query: 206 WTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQII 265
W + A + + L+ M S P+ F++ +L +C G+ HC +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 266 QMGFHSYLHVDNALIAMYSKCGVIDDALYIFEN--MVGRDVVTWNSMIAGYAQHGLAQEA 323
+ G + V ALI+MY KCG++ DA +FE + V +N++I+GY + +A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 324 ISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDL 383
+F M + GV D+VT L L+ C + G+ V+ G+ ++ + + +
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 384 LGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAE----SRLLLEPGC 439
+ G + R + MPV + W +++S +G + +E E S + +P
Sbjct: 201 YMKCGSVEAGRRLFDEMPV-KGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDP-- 257
Query: 440 SATLQQLANLYASVGWWNQVARVRKLMKDKGLKPN 474
TL + + A +G V KL++ G PN
Sbjct: 258 -FTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPN 291
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 244 bits (624), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 143/408 (35%), Positives = 220/408 (53%), Gaps = 40/408 (9%)
Query: 147 CGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEE--------- 197
C DL Q H +A+ G + +V V ++L+ +Y +C L + R+FEE
Sbjct: 121 CAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSW 180
Query: 198 ----------------------MPERNVVSWTAIIAGFAQEWRVDMCLELF-HLMRGSEM 234
MPERN V+WT ++AG+ LEL ++
Sbjct: 181 TVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGH 240
Query: 235 KPNYFTYTSLLSACMGSGALGYGRGAHCQIIQ----MGFH-SY--LHVDNALIAMYSKCG 287
N+ T S+LSAC SG L GR H ++ MG SY + V AL+ MY+KCG
Sbjct: 241 GLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCG 300
Query: 288 VIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLS 347
ID ++ +F M R+VVTWN++ +G A HG + I +F +MI++ V PD +T+ ++LS
Sbjct: 301 NIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLS 359
Query: 348 SCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAV 407
+C H G+V EG F+S+ +G++PK+DHY+C+VDLLGRAGLI EA + MPV PN V
Sbjct: 360 ACSHSGIVDEGWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEV 419
Query: 408 IWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMK 467
+ GSLL S +HG V I + + PG + ++N+Y + G + +R ++
Sbjct: 420 VLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLR 479
Query: 468 DKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSLVDHMSS 515
+G++ PG S I V VHRF + D+S+ R +I L ++ +++ + S
Sbjct: 480 KRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRS 527
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 136/318 (42%), Gaps = 44/318 (13%)
Query: 147 CGSKRDLNGGVQYHCLAITTGF--IANVYVGSSLISLYSRCALSGDAYRVFEEMP--ERN 202
C + L G + H + T+G Y+ ++L Y+ A ++F+E+P E++
Sbjct: 16 CAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKD 75
Query: 203 VVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHC 262
V WT +++ F++ + ++LF MR ++ + + L C LG+ + H
Sbjct: 76 NVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHG 135
Query: 263 QIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFE------------------------- 297
++MG + + V NAL+ MY KCG++ + IFE
Sbjct: 136 VAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLER 195
Query: 298 ------NMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMI-KQGVDPDAVTYLSLLSSCR 350
M R+ V W M+AGY G +E + L EM+ + G + VT S+LS+C
Sbjct: 196 GREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACA 255
Query: 351 HGGLVKEGQ---VY-FNSMVEHGVQPKLDHY---SCIVDLLGRAGLIREARDFIENMPVC 403
G + G+ VY + G + D + +VD+ + G I + + M
Sbjct: 256 QSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRK- 314
Query: 404 PNAVIWGSLLSSSRLHGN 421
N V W +L S +HG
Sbjct: 315 RNVVTWNALFSGLAMHGK 332
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 107/223 (47%), Gaps = 11/223 (4%)
Query: 134 GVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIA-------NVYVGSSLISLYSRCA 186
G++ L +S+C +L G H A+ + +V VG++L+ +Y++C
Sbjct: 241 GLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCG 300
Query: 187 LSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLS 246
+ VF M +RNVV+W A+ +G A + M +++F M E+KP+ T+T++LS
Sbjct: 301 NIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMI-REVKPDDLTFTAVLS 359
Query: 247 ACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM-VGRDVV 305
AC SG + G + G + ++ + + G+I++A + M V + V
Sbjct: 360 ACSHSGIVDEGWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEV 419
Query: 306 TWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSS 348
S++ + HG + A + E+I+ + P Y L+S+
Sbjct: 420 VLGSLLGSCSVHGKVEIAERIKRELIQ--MSPGNTEYQILMSN 460
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 133/348 (38%), Positives = 210/348 (60%), Gaps = 12/348 (3%)
Query: 176 SSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSE-- 233
+S+++ Y++ L DA ++F+EMPERNV+SW+ +I G+ + L+LF M+ +
Sbjct: 132 NSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPN 191
Query: 234 ---MKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVID 290
++PN FT +++LSAC GAL G+ H I + + + ALI MY+KCG ++
Sbjct: 192 EAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLE 251
Query: 291 DALYIFENMVG--RDVVTWNSMIAGYAQHGLAQEAISLFEEMI-KQGVDPDAVTYLSLLS 347
A +F N +G +DV +++MI A +GL E LF EM ++P++VT++ +L
Sbjct: 252 RAKRVF-NALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILG 310
Query: 348 SCRHGGLVKEGQVYFNSMVEH-GVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNA 406
+C H GL+ EG+ YF M+E G+ P + HY C+VDL GR+GLI+EA FI +MP+ P+
Sbjct: 311 ACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDV 370
Query: 407 VIWGSLLSSSRLHGNVWIGIEAAESRLL-LEPGCSATLQQLANLYASVGWWNQVARVRKL 465
+IWGSLLS SR+ G++ E A RL+ L+P S L+N+YA G W +V +R
Sbjct: 371 LIWGSLLSGSRMLGDIKT-CEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHE 429
Query: 466 MKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSLVDHM 513
M+ KG+ PG S++EV+ VH F D+S + I ++D ++ +
Sbjct: 430 MEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRL 477
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 84/177 (47%), Gaps = 9/177 (5%)
Query: 223 LELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAM 282
+ ++ MR + P++ T+ LL + L G+ H QI+ G V +L+ M
Sbjct: 47 ISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNM 106
Query: 283 YSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTY 342
YS CG + A +F++ +D+ WNS++ YA+ GL +A LF+EM ++ V +++
Sbjct: 107 YSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNV----ISW 162
Query: 343 LSLLSSCRHGGLVKEGQVYFNSMV-----EHGVQPKLDHYSCIVDLLGRAGLIREAR 394
L++ G KE F M E V+P S ++ GR G + + +
Sbjct: 163 SCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGK 219
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 97/202 (48%), Gaps = 6/202 (2%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEM- 198
+S +S+CG L G H ++ +G++LI +Y++C A RVF +
Sbjct: 202 MSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALG 261
Query: 199 PERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSE-MKPNYFTYTSLLSACMGSGALGYG 257
+++V +++A+I A D C +LF M S+ + PN T+ +L AC+ G + G
Sbjct: 262 SKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEG 321
Query: 258 RGAHCQII-QMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM-VGRDVVTWNSMIAGYA 315
+ +I + G + ++ +Y + G+I +A +M + DV+ W S+++G
Sbjct: 322 KSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSR 381
Query: 316 QHGLAQEAISLFEEMIKQGVDP 337
G + + +I+ +DP
Sbjct: 382 MLGDIKTCEGALKRLIE--LDP 401
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 140/376 (37%), Positives = 205/376 (54%), Gaps = 2/376 (0%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP 199
L S R ++ G Q H I G ++ V SSL +Y R D V MP
Sbjct: 94 LGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMP 153
Query: 200 ERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRG 259
RN+V+W +I G AQ + L L+ +M+ S +PN T+ ++LS+C G G+
Sbjct: 154 VRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQ 213
Query: 260 AHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGL 319
H + I++G S + V ++LI+MYSKCG + DA F D V W+SMI+ Y HG
Sbjct: 214 IHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQ 273
Query: 320 AQEAISLFEEMIKQ-GVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE-HGVQPKLDHY 377
EAI LF M +Q ++ + V +L+LL +C H GL +G F+ MVE +G +P L HY
Sbjct: 274 GDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHY 333
Query: 378 SCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEP 437
+C+VDLLGRAG + +A I +MP+ + VIW +LLS+ +H N + + L ++P
Sbjct: 334 TCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDP 393
Query: 438 GCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNR 497
SA LAN++AS W V+ VRK M+DK +K G SW E K +VH+F+ D+S
Sbjct: 394 NDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQS 453
Query: 498 RMSDILLVIDSLVDHM 513
+ +I + L M
Sbjct: 454 KSKEIYSYLKELTLEM 469
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 130/254 (51%), Gaps = 6/254 (2%)
Query: 178 LISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPN 237
LI+ Y R +A +VF+EMP+R + +W A+IAG Q + L LF M G P+
Sbjct: 31 LINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPD 90
Query: 238 YFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFE 297
+T S+ S G ++ G+ H I+ G L V+++L MY + G + D +
Sbjct: 91 EYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIR 150
Query: 298 NMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKE 357
+M R++V WN++I G AQ+G + + L++ M G P+ +T++++LSSC + +
Sbjct: 151 SMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQ 210
Query: 358 GQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIRE-ARDFIENMPVCPNAVIWGSLLSSS 416
GQ ++ G + S ++ + + G + + A+ F E + V+W S++S+
Sbjct: 211 GQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERED--EDEVMWSSMISAY 268
Query: 417 RLHGNVWIGIEAAE 430
HG G EA E
Sbjct: 269 GFHGQ---GDEAIE 279
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 136/409 (33%), Positives = 225/409 (55%), Gaps = 39/409 (9%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEE------ 197
+ S + RD+ G Q HC A+ G +NV+VGS++++ Y + + DA R F++
Sbjct: 100 IGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNV 159
Query: 198 -------------------------MPERNVVSWTAIIAGFAQEWRVDMCLELF-HLMRG 231
MPER+VV+W A+I GF+Q R + + F ++R
Sbjct: 160 VSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLRE 219
Query: 232 SEMKPNYFTYTSLLSACMGSGALGYGRGAH-CQIIQMGFHSYLHVDNALIAMYSKCGVID 290
+ PN T+ ++A + G G+ H C I +G + V N+LI+ YSKCG ++
Sbjct: 220 GVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNME 279
Query: 291 DALYIFENMV--GRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQ-GVDPDAVTYLSLLS 347
D+L F + R++V+WNSMI GYA +G +EA+++FE+M+K + P+ VT L +L
Sbjct: 280 DSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLF 339
Query: 348 SCRHGGLVKEGQVYFNSMVEHGVQP---KLDHYSCIVDLLGRAGLIREARDFIENMPVCP 404
+C H GL++EG +YFN V P +L+HY+C+VD+L R+G +EA + I++MP+ P
Sbjct: 340 ACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDP 399
Query: 405 NAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRK 464
W +LL ++H N + AA L L+P ++ L+N Y+++ W V+ +R+
Sbjct: 400 GIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRR 459
Query: 465 LMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSLVDHM 513
MK+ GLK G SWIEV+ ++ F DK+N ++ ++ + H+
Sbjct: 460 KMKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRMLALVSQHL 508
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 143/318 (44%), Gaps = 65/318 (20%)
Query: 190 DAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACM 249
+A++VF+E+PE +V+S TA+I F +E R + F + ++PN FT+ +++ +
Sbjct: 45 NAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSST 104
Query: 250 GSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDD------------------ 291
S + G+ HC ++MG S + V +A++ Y K + D
Sbjct: 105 TSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITN 164
Query: 292 -------------ALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQG-VDP 337
AL +F M R VVTWN++I G++Q G +EA++ F +M+++G V P
Sbjct: 165 LISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIP 224
Query: 338 DAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFI 397
+ T+ +++ +++ HG + ++C + LG+
Sbjct: 225 NESTFPCAITA-------------ISNIASHGAGKSI--HACAIKFLGKRF--------- 260
Query: 398 ENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWN 457
N +W SL+S GN+ + A ++L E + + YA G
Sbjct: 261 -------NVFVWNSLISFYSKCGNMEDSL-LAFNKLEEEQRNIVSWNSMIWGYAHNGRGE 312
Query: 458 Q-VARVRKLMKDKGLKPN 474
+ VA K++KD L+PN
Sbjct: 313 EAVAMFEKMVKDTNLRPN 330
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 144/431 (33%), Positives = 237/431 (54%), Gaps = 17/431 (3%)
Query: 98 RLIEDMLE------NSVINHVGSNLATLKTTTEMSSVMEQELGV---DVCFLSHAVSSC- 147
+L ++M E NS+I+ K +S +M E+G +V FLS +S+C
Sbjct: 87 KLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLS-MISACV 145
Query: 148 --GSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVS 205
GSK + G H L + G + V V ++ I+ Y + + ++FE++ +N+VS
Sbjct: 146 YGGSKEE---GRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVS 202
Query: 206 WTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQII 265
W +I Q + L F++ R +P+ T+ ++L +C G + +G H I+
Sbjct: 203 WNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIM 262
Query: 266 QMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAIS 325
GF + AL+ +YSK G ++D+ +F + D + W +M+A YA HG ++AI
Sbjct: 263 FGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIK 322
Query: 326 LFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE-HGVQPKLDHYSCIVDLL 384
FE M+ G+ PD VT+ LL++C H GLV+EG+ YF +M + + + P+LDHYSC+VDLL
Sbjct: 323 HFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLL 382
Query: 385 GRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQ 444
GR+GL+++A I+ MP+ P++ +WG+LL + R++ + +G +AAE LEP
Sbjct: 383 GRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYV 442
Query: 445 QLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDILL 504
L+N+Y++ G W +R+R LMK KGL G S+IE +K+H+F D S+ I
Sbjct: 443 MLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQK 502
Query: 505 VIDSLVDHMSS 515
+ + M S
Sbjct: 503 KLKEIRKKMKS 513
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 143/263 (54%), Gaps = 3/263 (1%)
Query: 160 HCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRV 219
HC + + + ++G L+ Y R A ++F+EMPER++VSW ++I+G++ +
Sbjct: 54 HCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYL 113
Query: 220 DMCLELFHLMRGSEM--KPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDN 277
C E+ M SE+ +PN T+ S++SAC+ G+ GR H +++ G + V N
Sbjct: 114 GKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVN 173
Query: 278 ALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDP 337
A I Y K G + + +FE++ +++V+WN+MI + Q+GLA++ ++ F + G +P
Sbjct: 174 AFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEP 233
Query: 338 DAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFI 397
D T+L++L SC G+V+ Q ++ G + ++DL + G + ++
Sbjct: 234 DQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVF 293
Query: 398 ENMPVCPNAVIWGSLLSSSRLHG 420
+ P+++ W ++L++ HG
Sbjct: 294 HEI-TSPDSMAWTAMLAAYATHG 315
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 243 bits (619), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 133/347 (38%), Positives = 204/347 (58%), Gaps = 9/347 (2%)
Query: 176 SSLISLYSRCALSGDAYRVFEEMPE--------RNVVSWTAIIAGFAQEWRVDMCLELFH 227
+SLI+ + +A +F E+ E NVV+WT++I G + R D LE F
Sbjct: 364 NSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFR 423
Query: 228 LMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCG 287
M+ S++ N T +LS C AL GR H +I+ + V NAL+ MY+KCG
Sbjct: 424 QMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCG 483
Query: 288 VIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLS 347
++ + +FE + +D+++WNS+I GY HG A++A+S+F+ MI G PD + +++LS
Sbjct: 484 LLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLS 543
Query: 348 SCRHGGLVKEGQVYFNSMVEH-GVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNA 406
+C H GLV++G+ F SM + G++P+ +HY+CIVDLLGR G ++EA + ++NMP+ P
Sbjct: 544 ACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKV 603
Query: 407 VIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLM 466
+ G+LL+S R+H NV I A +LEP + + L+N+Y++ G W + A VR L
Sbjct: 604 CVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALA 663
Query: 467 KDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSLVDHM 513
K K LK GSSWIEVK K ++F + I V++ LV HM
Sbjct: 664 KKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHM 710
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 123/498 (24%), Positives = 192/498 (38%), Gaps = 85/498 (17%)
Query: 17 YAFFLNNNMSLFHLSLFHSWIQLLFTRNPTFCLTNQFFRPFSSQKLPPR---RANKELAN 73
Y+ NN+ SLFH F CLT Q R +Q L R+ AN
Sbjct: 45 YSLTSNNDQSLFHY----------FDHLLGLCLTAQQCRQVHAQVLLSDFIFRSGSLAAN 94
Query: 74 ALRILNLVSPKKSASDIENRRSHLRLIEDMLENSVINHVGSNLATLKTTTEMSSVMEQE- 132
+ + + A ++ S + L + L NS++ S+ + E+ M Q
Sbjct: 95 LISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSH-GLYENALELYRGMRQRG 153
Query: 133 LGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAY 192
L D L + +C +H I G N++V + L++LY + GDAY
Sbjct: 154 LTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAY 213
Query: 193 RVFEEMPERNVVSWTAIIAGFAQEW----------------------------------- 217
+F EMP RN +SW +I GF+QE+
Sbjct: 214 NLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCG 273
Query: 218 RVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDN 277
+ + L+ FHLMR S + S C AL H +I+ GF YL N
Sbjct: 274 KFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRN 333
Query: 278 ALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQ---- 333
ALI +Y K G + DA ++F + + + +WNS+I + G EA+SLF E+ +
Sbjct: 334 ALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVC 393
Query: 334 GVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREA 393
V + VT+ S++ C G + YF M V CI+ + +
Sbjct: 394 NVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLG 453
Query: 394 RDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASV 453
R+ +HG+V I + S +L L N+YA
Sbjct: 454 RE----------------------IHGHV---IRTSMSENIL------VQNALVNMYAKC 482
Query: 454 GWWNQVARVRKLMKDKGL 471
G ++ + V + ++DK L
Sbjct: 483 GLLSEGSLVFEAIRDKDL 500
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 4/166 (2%)
Query: 135 VDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRV 194
V +C + +S C LN G + H I T N+ V ++L+++Y++C L + V
Sbjct: 435 VTICCI---LSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLV 491
Query: 195 FEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGAL 254
FE + +++++SW +II G+ + L +F M S P+ ++LSAC +G +
Sbjct: 492 FEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLV 551
Query: 255 GYGRGA-HCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM 299
GR + + G ++ + + G + +A I +NM
Sbjct: 552 EKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNM 597
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 242 bits (618), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 137/401 (34%), Positives = 215/401 (53%), Gaps = 35/401 (8%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEM----- 198
+++C R L Q H + GF++NV + S+I Y++C A R F+EM
Sbjct: 186 LTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDI 245
Query: 199 --------------------------PERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGS 232
PE+N VSWTA+IAG+ ++ + L+LF M
Sbjct: 246 HIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIAL 305
Query: 233 EMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDA 292
+KP FT++S L A +L +G+ H +I+ V ++LI MYSK G ++ +
Sbjct: 306 GVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEAS 365
Query: 293 LYIFENMVGR-DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRH 351
+F + D V WN+MI+ AQHGL +A+ + ++MIK V P+ T + +L++C H
Sbjct: 366 ERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSH 425
Query: 352 GGLVKEGQVYFNSM-VEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWG 410
GLV+EG +F SM V+HG+ P +HY+C++DLLGRAG +E IE MP P+ IW
Sbjct: 426 SGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWN 485
Query: 411 SLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKG 470
++L R+HGN +G +AA+ + L+P SA L+++YA G W V ++R +MK +
Sbjct: 486 AILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRR 545
Query: 471 LKPNPGSSWIEVKSKVHRFEAQDKS--NRRMSDILLVIDSL 509
+ SWIE++ KV F D S + R +I ++ +L
Sbjct: 546 VNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNL 586
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 156/364 (42%), Gaps = 63/364 (17%)
Query: 120 KTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFI-ANVYVGSSL 178
+ + + S+ +Q + + L+ + CG + L G H TGF N + + L
Sbjct: 29 QAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHL 88
Query: 179 ISLYSRCALSGDAYRVFEEM-------------------------------PERNVVSWT 207
I +Y +C DA +VF++M PER+VVSW
Sbjct: 89 IGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWN 148
Query: 208 AIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQM 267
++ G+AQ+ + L + R S +K N F++ LL+AC+ S L R AH Q++
Sbjct: 149 TMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVA 208
Query: 268 GFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDV----------------------- 304
GF S + + ++I Y+KCG ++ A F+ M +D+
Sbjct: 209 GFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLF 268
Query: 305 --------VTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVK 356
V+W ++IAGY + G A+ LF +MI GV P+ T+ S L + ++
Sbjct: 269 CEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLR 328
Query: 357 EGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSS 416
G+ M+ V+P S ++D+ ++G + + + V W +++S+
Sbjct: 329 HGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISAL 388
Query: 417 RLHG 420
HG
Sbjct: 389 AQHG 392
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 87/212 (41%), Gaps = 5/212 (2%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP 199
S + + S L G + H I T N V SSLI +YS+ + RVF
Sbjct: 314 FSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICD 373
Query: 200 ER-NVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYG- 257
++ + V W +I+ AQ L + M ++PN T +L+AC SG + G
Sbjct: 374 DKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGL 433
Query: 258 RGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM-VGRDVVTWNSMIAGYAQ 316
R +Q G LI + + G + + E M D WN+++
Sbjct: 434 RWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRI 493
Query: 317 HGLAQEAISLFEEMIKQGVDPDAVTYLSLLSS 348
HG + +E+IK +DP++ LLSS
Sbjct: 494 HGNEELGKKAADELIK--LDPESSAPYILLSS 523
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 242 bits (618), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 130/356 (36%), Positives = 204/356 (57%), Gaps = 2/356 (0%)
Query: 156 GVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQ 215
G + H LAI + + V ++LI++YS+C A VF + E ++ +W +II+G+AQ
Sbjct: 299 GKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQ 358
Query: 216 EWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMG-FHSYLH 274
+ + L M + +PN T S+L C L +G+ HC I++ F Y
Sbjct: 359 LNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTM 418
Query: 275 VDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQG 334
+ N+L+ +Y+K G I A + + M RD VT+ S+I GY G A++LF+EM + G
Sbjct: 419 LWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSG 478
Query: 335 VDPDAVTYLSLLSSCRHGGLVKEGQVYFNSM-VEHGVQPKLDHYSCIVDLLGRAGLIREA 393
+ PD VT +++LS+C H LV EG+ F M E+G++P L H+SC+VDL GRAG + +A
Sbjct: 479 IKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKA 538
Query: 394 RDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASV 453
+D I NMP P+ W +LL++ +HGN IG AAE L ++P +AN+YA+
Sbjct: 539 KDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAA 598
Query: 454 GWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSL 509
G W+++A VR +M+D G+K +PG +WI+ S F D S+ + ++D L
Sbjct: 599 GSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGL 654
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 132/293 (45%), Gaps = 36/293 (12%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV 203
+ +CG D+ G H + + +++YV ++LIS+Y R G A R+F+ M ER+
Sbjct: 151 LKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDA 210
Query: 204 VSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTY---------------------- 241
VSW A+I +A E ELF M S ++ + T+
Sbjct: 211 VSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISR 270
Query: 242 -----TSL--------LSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGV 288
TSL L AC GA+ G+ H I + +V N LI MYSKC
Sbjct: 271 MRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKD 330
Query: 289 IDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSS 348
+ AL +F + TWNS+I+GYAQ ++EA L EM+ G P+++T S+L
Sbjct: 331 LRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPL 390
Query: 349 CRHGGLVKEGQVYFNSMVEHGVQPKLDH-YSCIVDLLGRAGLIREARDFIENM 400
C ++ G+ + ++ ++ +VD+ ++G I A+ + M
Sbjct: 391 CARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLM 443
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 135/284 (47%), Gaps = 32/284 (11%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV 203
+S+C R GVQ H I++G + + L++ YS L +A + E +
Sbjct: 50 LSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHP 109
Query: 204 VSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQ 263
+ W +IA +A+ + + + M ++P+ FTY S+L AC + + +GR H
Sbjct: 110 LPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGS 169
Query: 264 IIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEA 323
I + S L+V NALI+MY + + A +F+ M RD V+WN++I YA G+ EA
Sbjct: 170 IEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEA 229
Query: 324 ISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDL 383
LF++M GV+ +T+ +++S GG ++ G +
Sbjct: 230 FELFDKMWFSGVEVSVITW-NIIS----GGCLQTG-----------------------NY 261
Query: 384 LGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIE 427
+G GLI R+F ++ P A+I G L + L G + +G E
Sbjct: 262 VGALGLISRMRNFPTSLD--PVAMIIG--LKACSLIGAIRLGKE 301
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 1/173 (0%)
Query: 242 TSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVG 301
SLLSAC+ A G H I G + + L+ YS + ++A I EN
Sbjct: 47 ASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDI 106
Query: 302 RDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVY 361
+ WN +IA YA++ L +E I+ ++ M+ +G+ PDA TY S+L +C V G+V
Sbjct: 107 LHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVV 166
Query: 362 FNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLS 414
S+ + L + ++ + R + AR + M +AV W ++++
Sbjct: 167 HGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRM-FERDAVSWNAVIN 218
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 242 bits (617), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 124/320 (38%), Positives = 187/320 (58%), Gaps = 1/320 (0%)
Query: 191 AYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMG 250
A F++MP R+ +SWT +I G+ + + LE+F M+ + M P+ FT S+L+AC
Sbjct: 321 ARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAH 380
Query: 251 SGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSM 310
G+L G I + + + V NALI MY KCG + A +F +M RD TW +M
Sbjct: 381 LGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAM 440
Query: 311 IAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSM-VEHG 369
+ G A +G QEAI +F +M + PD +TYL +LS+C H G+V + + +F M +H
Sbjct: 441 VVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHR 500
Query: 370 VQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAA 429
++P L HY C+VD+LGRAGL++EA + + MP+ PN+++WG+LL +SRLH + + AA
Sbjct: 501 IEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAA 560
Query: 430 ESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRF 489
+ L LEP A L N+YA W + VR+ + D +K PG S IEV H F
Sbjct: 561 KKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEF 620
Query: 490 EAQDKSNRRMSDILLVIDSL 509
A DKS+ + +I + ++ L
Sbjct: 621 VAGDKSHLQSEEIYMKLEEL 640
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 174/380 (45%), Gaps = 22/380 (5%)
Query: 103 MLENSVINHVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCL 162
+L N + + S L+ K + S + + + D S +S G + + Q H
Sbjct: 2 ILRNPLKSPFNSELSIFKAL--LMSTITESISND---YSRFISILGVCKTTDQFKQLHSQ 56
Query: 163 AITTGFIANVYVGSSLISLYSRCALSGD----AYRVFEEMPERNVVSWTAIIAGFAQEWR 218
+IT G N L + C+ G AY++F ++PE +VV W +I G+++
Sbjct: 57 SITRGVAPNPTFQKKLFVFW--CSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDC 114
Query: 219 VDMCLELFHLMRGSEMKPNYFTYTSLLSACM-GSGALGYGRGAHCQIIQMGFHSYLHVDN 277
+ L+ M + P+ T+ LL+ GAL G+ HC +++ G S L+V N
Sbjct: 115 DGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQN 174
Query: 278 ALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDP 337
AL+ MYS CG++D A +F+ DV +WN MI+GY + +E+I L EM + V P
Sbjct: 175 ALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSP 234
Query: 338 DAVTYLSLLSSC---RHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREAR 394
+VT L +LS+C + L K Y + E +P L + +V+ G + A
Sbjct: 235 TSVTLLLVLSACSKVKDKDLCKRVHEYVS---ECKTEPSLRLENALVNAYAACGEMDIAV 291
Query: 395 DFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVG 454
+M + + W S++ GN+ + ++ + S T+ + + Y G
Sbjct: 292 RIFRSMKA-RDVISWTSIVKGYVERGNLKLA-RTYFDQMPVRDRISWTI--MIDGYLRAG 347
Query: 455 WWNQVARVRKLMKDKGLKPN 474
+N+ + + M+ G+ P+
Sbjct: 348 CFNESLEIFREMQSAGMIPD 367
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 133/287 (46%), Gaps = 34/287 (11%)
Query: 148 GSKRD---LNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVV 204
G KRD L G + HC + G +N+YV ++L+ +YS C L A VF+ + +V
Sbjct: 143 GLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVF 202
Query: 205 SWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQI 264
SW +I+G+ + + +EL M + + P T +LSAC + H +
Sbjct: 203 SWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYV 262
Query: 265 IQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNS--------------- 309
+ L ++NAL+ Y+ CG +D A+ IF +M RDV++W S
Sbjct: 263 SECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLAR 322
Query: 310 ----------------MIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGG 353
MI GY + G E++ +F EM G+ PD T +S+L++C H G
Sbjct: 323 TYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLG 382
Query: 354 LVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENM 400
++ G+ + ++ ++ + + ++D+ + G +A+ +M
Sbjct: 383 SLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDM 429
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 76/153 (49%), Gaps = 10/153 (6%)
Query: 171 NVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMR 230
+V VG++LI +Y +C S A +VF +M +R+ +WTA++ G A + +++F M+
Sbjct: 402 DVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQ 461
Query: 231 GSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQI-----IQMGFHSYLHVDNALIAMYSK 285
++P+ TY +LSAC SG + R ++ I+ Y ++ M +
Sbjct: 462 DMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHY----GCMVDMLGR 517
Query: 286 CGVIDDALYIFENM-VGRDVVTWNSMIAGYAQH 317
G++ +A I M + + + W +++ H
Sbjct: 518 AGLVKEAYEILRKMPMNPNSIVWGALLGASRLH 550
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 242 bits (617), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 126/330 (38%), Positives = 198/330 (60%), Gaps = 5/330 (1%)
Query: 188 SGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLE-LFHLMRGSEMKPNYFTYTSLLS 246
SG A +V ++NV++W +I G+ + + + L+ L +++ +++KPN F++ S L+
Sbjct: 114 SGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLA 173
Query: 247 ACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVT 306
AC G L + + H +I G + +AL+ +Y+KCG I + +F ++ DV
Sbjct: 174 ACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSI 233
Query: 307 WNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMV 366
WN+MI G+A HGLA EAI +F EM + V PD++T+L LL++C H GL++EG+ YF M
Sbjct: 234 WNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMS 293
Query: 367 EH-GVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIG 425
+QPKL+HY +VDLLGRAG ++EA + IE+MP+ P+ VIW SLLSSSR + N +G
Sbjct: 294 RRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELG 353
Query: 426 IEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSK 485
A ++ L S L+N+Y+S W +VR+LM +G++ G SW+E
Sbjct: 354 EIAIQN---LSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFGGM 410
Query: 486 VHRFEAQDKSNRRMSDILLVIDSLVDHMSS 515
+HRF+A D S+ I V++ L+ S
Sbjct: 411 IHRFKAGDTSHIETKAIYKVLEGLIQKTKS 440
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 81/175 (46%), Gaps = 2/175 (1%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP 199
+ ++++C DL+ H L I +G N + S+L+ +Y++C G + VF +
Sbjct: 168 FASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVK 227
Query: 200 ERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRG 259
+V W A+I GFA + +F M + P+ T+ LL+ C G L G+
Sbjct: 228 RNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKE 287
Query: 260 AHCQII-QMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM-VGRDVVTWNSMIA 312
+ + L A++ + + G + +A + E+M + DVV W S+++
Sbjct: 288 YFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 86/195 (44%), Gaps = 35/195 (17%)
Query: 260 AHCQIIQMGFHSYLHVDNALIAMYSKCG------------------------VIDDALYI 295
AH QI ++G+ +Y + + +A Y +C +I+ + I
Sbjct: 52 AHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLLLWFLSLSPGVCNINLIIESLMKI 111
Query: 296 FE---------NMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIK-QGVDPDAVTYLSL 345
E N ++V+TWN MI GY ++ +EA+ + M+ + P+ ++ S
Sbjct: 112 GESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASS 171
Query: 346 LSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPN 405
L++C G + + + M++ G++ S +VD+ + G I +R+ ++ +
Sbjct: 172 LAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKR-ND 230
Query: 406 AVIWGSLLSSSRLHG 420
IW ++++ HG
Sbjct: 231 VSIWNAMITGFATHG 245
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 241 bits (616), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 125/340 (36%), Positives = 202/340 (59%), Gaps = 5/340 (1%)
Query: 191 AYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMG 250
A +F +MP ++++SWT +I G++Q R + +F+ M + P+ T ++++SAC
Sbjct: 985 AESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAH 1044
Query: 251 SGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSM 310
G L G+ H +Q GF +++ +AL+ MYSKCG ++ AL +F N+ +++ WNS+
Sbjct: 1045 LGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSI 1104
Query: 311 IAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMV-EHG 369
I G A HG AQEA+ +F +M + V P+AVT++S+ ++C H GLV EG+ + SM+ ++
Sbjct: 1105 IEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYS 1164
Query: 370 VQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAA 429
+ ++HY +V L +AGLI EA + I NM PNAVIWG+LL R+H N+ I A
Sbjct: 1165 IVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAF 1224
Query: 430 ESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGL-KPNPGSSWIEVKSKVHR 488
++LEP S L ++YA W VA +R M++ G+ K PG+S I + + H
Sbjct: 1225 NKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHL 1284
Query: 489 FEAQDKSNRRMSDILLVIDSLVDHMSSLSLQSHMYEEENI 528
F A DKS+ ++ L++D + D M L ++ E EN+
Sbjct: 1285 FAAADKSHSASDEVCLLLDEIYDQM---GLAGYVQETENV 1321
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 99/196 (50%), Gaps = 10/196 (5%)
Query: 128 VMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCAL 187
+ME+ + D +S +S+C L G + H + GF+ +VY+GS+L+ +YS+C
Sbjct: 1023 MMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGS 1082
Query: 188 SGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSA 247
A VF +P++N+ W +II G A L++F M +KPN T+ S+ +A
Sbjct: 1083 LERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTA 1142
Query: 248 CMGSGALGYGRGAHCQIIQMGFHSYLHVDN-----ALIAMYSKCGVIDDALYIFENM-VG 301
C +G + GR + +I Y V N ++ ++SK G+I +AL + NM
Sbjct: 1143 CTHAGLVDEGRRIYRSMID----DYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFE 1198
Query: 302 RDVVTWNSMIAGYAQH 317
+ V W +++ G H
Sbjct: 1199 PNAVIWGALLDGCRIH 1214
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 117/294 (39%), Gaps = 69/294 (23%)
Query: 191 AYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMG 250
A +M E NV + A+ GF LEL+ M + P+ +TY+SL+ A
Sbjct: 824 AVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKA--S 881
Query: 251 SGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSM 310
S A +G I + GF ++ + LI YS G I +A +F+ M RD + W +M
Sbjct: 882 SFASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTM 941
Query: 311 IA-------------------------------GYAQHGLAQEAISLFEE---------- 329
++ GY G ++A SLF +
Sbjct: 942 VSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWT 1001
Query: 330 ---------------------MIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEH 368
M+++G+ PD VT +++S+C H G+++ G+ +++
Sbjct: 1002 TMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQN 1061
Query: 369 GVQPKLDHY--SCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHG 420
G LD Y S +VD+ + G + A N+P N W S++ HG
Sbjct: 1062 GF--VLDVYIGSALVDMYSKCGSLERALLVFFNLPK-KNLFCWNSIIEGLAAHG 1112
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 149/459 (32%), Positives = 239/459 (52%), Gaps = 48/459 (10%)
Query: 106 NSVIN---HVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCL 162
NS+IN GS L+ +M S +++ + +S+C R+L G Q C
Sbjct: 201 NSMINGFVQKGSPDKALELFKKMES---EDVKASHVTMVGVLSACAKIRNLEFGRQV-CS 256
Query: 163 AITTGFI-ANVYVGSSLISLYSRCALSGDAYRVFE------------------------- 196
I + N+ + ++++ +Y++C DA R+F+
Sbjct: 257 YIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEA 316
Query: 197 ------EMPERNVVSWTAIIAGFAQEWRVDMCLELFH-LMRGSEMKPNYFTYTSLLSACM 249
MP++++V+W A+I+ + Q + + L +FH L MK N T S LSAC
Sbjct: 317 AREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACA 376
Query: 250 GSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNS 309
GAL GR H I + G HV +ALI MYSKCG ++ + +F ++ RDV W++
Sbjct: 377 QVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSA 436
Query: 310 MIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSM-VEH 368
MI G A HG EA+ +F +M + V P+ VT+ ++ +C H GLV E + F+ M +
Sbjct: 437 MIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNY 496
Query: 369 GVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEA 428
G+ P+ HY+CIVD+LGR+G + +A FIE MP+ P+ +WG+LL + ++H N+ + E
Sbjct: 497 GIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLA-EM 555
Query: 429 AESRLL-LEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVH 487
A +RLL LEP L+N+YA +G W V+ +RK M+ GLK PG S IE+ +H
Sbjct: 556 ACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIH 615
Query: 488 RFEAQDKSNRRMSDILLVIDSLVDHMSSLSLQSHMYEEE 526
F + D ++ + + +++ L+S+ YE E
Sbjct: 616 EFLSGDNAHPMSEKVYGKLHEVME-----KLKSNGYEPE 649
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 156/314 (49%), Gaps = 36/314 (11%)
Query: 139 FLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEM 198
FL A + S L+ G H +A+ + ++V+V +SLI Y C A +VF +
Sbjct: 136 FLIKAAAEVSS---LSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTI 192
Query: 199 PERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGR 258
E++VVSW ++I GF Q+ D LELF M ++K ++ T +LSAC L +GR
Sbjct: 193 KEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGR 252
Query: 259 GAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFE--------------------- 297
I + + L + NA++ MY+KCG I+DA +F+
Sbjct: 253 QVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISE 312
Query: 298 ----------NMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEM-IKQGVDPDAVTYLSLL 346
+M +D+V WN++I+ Y Q+G EA+ +F E+ +++ + + +T +S L
Sbjct: 313 DYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTL 372
Query: 347 SSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNA 406
S+C G ++ G+ + + +HG++ S ++ + + G + ++R+ ++ +
Sbjct: 373 SACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEK-RDV 431
Query: 407 VIWGSLLSSSRLHG 420
+W +++ +HG
Sbjct: 432 FVWSAMIGGLAMHG 445
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 135/273 (49%), Gaps = 7/273 (2%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAY--RVFEEMPER 201
+ C S R L Q H I TG ++ Y S L ++ + + + Y +VF+E+P+
Sbjct: 37 IERCVSLRQLK---QTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKP 93
Query: 202 NVVSWTAIIAGFAQEWRVDMCLELF-HLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGA 260
N +W +I +A + + F ++ S+ PN +T+ L+ A +L G+
Sbjct: 94 NSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSL 153
Query: 261 HCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLA 320
H ++ S + V N+LI Y CG +D A +F + +DVV+WNSMI G+ Q G
Sbjct: 154 HGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSP 213
Query: 321 QEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCI 380
+A+ LF++M + V VT + +LS+C ++ G+ + + E+ V L + +
Sbjct: 214 DKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAM 273
Query: 381 VDLLGRAGLIREARDFIENMPVCPNAVIWGSLL 413
+D+ + G I +A+ + M N V W ++L
Sbjct: 274 LDMYTKCGSIEDAKRLFDAMEEKDN-VTWTTML 305
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 125/345 (36%), Positives = 201/345 (58%), Gaps = 9/345 (2%)
Query: 191 AYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMG 250
A R+F EMP R+ VSW+ +I G A + F ++ + M PN + T +LSAC
Sbjct: 222 AKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQ 281
Query: 251 SGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMV-GRDVVTWNS 309
SG+ +G+ H + + G+ + V+NALI MYS+CG + A +FE M R +V+W S
Sbjct: 282 SGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTS 341
Query: 310 MIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE-H 368
MIAG A HG +EA+ LF EM GV PD ++++SLL +C H GL++EG+ YF+ M +
Sbjct: 342 MIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVY 401
Query: 369 GVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEA 428
++P+++HY C+VDL GR+G +++A DFI MP+ P A++W +LL + HGN+ + +
Sbjct: 402 HIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQV 461
Query: 429 AESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHR 488
+ L+P S L L+N YA+ G W VA +RK M + +K S +EV +++
Sbjct: 462 KQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYK 521
Query: 489 FEAQDK-------SNRRMSDILLVIDSLVDHMSSLSLQSHMYEEE 526
F A +K ++ ++ +I+L + + ++ + EEE
Sbjct: 522 FTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEVASALYDVEEE 566
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 121/271 (44%), Gaps = 39/271 (14%)
Query: 151 RDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAII 210
R L G Q HC A+ G ++++VG++LI +Y C A +VF+EM + N+V+W A
Sbjct: 120 RSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNA-- 177
Query: 211 AGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFH 270
+++AC + R +++
Sbjct: 178 ---------------------------------VITACFRGNDVAGAREIFDKMLVRNHT 204
Query: 271 SYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEM 330
S+ N ++A Y K G ++ A IF M RD V+W++MI G A +G E+ F E+
Sbjct: 205 SW----NVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFREL 260
Query: 331 IKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLI 390
+ G+ P+ V+ +LS+C G + G++ + + G + + ++D+ R G +
Sbjct: 261 QRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNV 320
Query: 391 REARDFIENMPVCPNAVIWGSLLSSSRLHGN 421
AR E M V W S+++ +HG
Sbjct: 321 PMARLVFEGMQEKRCIVSWTSMIAGLAMHGQ 351
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 13/216 (6%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP 199
L+ +S+C G H G+ V V ++LI +YSRC A VFE M
Sbjct: 272 LTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQ 331
Query: 200 E-RNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGR 258
E R +VSWT++IAG A + + + LF+ M + P+ ++ SLL AC +G + G
Sbjct: 332 EKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGE 391
Query: 259 GAHCQIIQMGFHSYLHVDN--ALIAMYSKCGVIDDAL-YIFENMVGRDVVTWNSMIAGYA 315
++ ++ +H +++ ++ +Y + G + A +I + + + W +++ +
Sbjct: 392 DYFSEMKRV-YHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACS 450
Query: 316 QHGLAQEAISLFEEMIKQ---GVDPDAVTYLSLLSS 348
HG + A E +KQ +DP+ L LLS+
Sbjct: 451 SHGNIELA-----EQVKQRLNELDPNNSGDLVLLSN 481
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 124/350 (35%), Positives = 205/350 (58%), Gaps = 6/350 (1%)
Query: 136 DVCF----LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDA 191
D+CF LS A+ C + +L G+Q H L + +G+ + VGS L+ L++ DA
Sbjct: 337 DLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDA 396
Query: 192 YRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGS 251
+++F +P +++++++ +I G + + LF + + + F +++L C
Sbjct: 397 HKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSL 456
Query: 252 GALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMI 311
+LG+G+ H I+ G+ S AL+ MY KCG ID+ + +F+ M+ RDVV+W +I
Sbjct: 457 ASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGII 516
Query: 312 AGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSM-VEHGV 370
G+ Q+G +EA F +MI G++P+ VT+L LLS+CRH GL++E + +M E+G+
Sbjct: 517 VGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGL 576
Query: 371 QPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAE 430
+P L+HY C+VDLLG+AGL +EA + I MP+ P+ IW SLL++ H N + AE
Sbjct: 577 EPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAE 636
Query: 431 SRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWI 480
L P + L+N YA++G W+Q+++VR+ K G K + G SWI
Sbjct: 637 KLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREAAKKLGAKES-GMSWI 685
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 150/313 (47%), Gaps = 33/313 (10%)
Query: 135 VDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRV 194
+D+ ++ + CG + G I G NV++ +++IS+Y L DA++V
Sbjct: 3 MDLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKV 62
Query: 195 FEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMK-PNYFTYTSLLSACMGSGA 253
F+EM ERN+V+WT +++G+ + + + +EL+ M SE + N F Y+++L AC G
Sbjct: 63 FDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGD 122
Query: 254 LGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAG 313
+ G + +I + + + N+++ MY K G + +A F+ ++ +WN++I+G
Sbjct: 123 IQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISG 182
Query: 314 YAQHGLAQEAISLFEEMIKQGV--------------DPDAVTYLSL-------------- 345
Y + GL EA++LF M + V P A+ +L
Sbjct: 183 YCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALP 242
Query: 346 --LSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFI--ENMP 401
L +C GGL+ G+ +V+ G++ S ++D+ G + A D E +
Sbjct: 243 CGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLA 302
Query: 402 VCPNAVIWGSLLS 414
V + +W S+LS
Sbjct: 303 VNSSVAVWNSMLS 315
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 97/215 (45%), Gaps = 3/215 (1%)
Query: 133 LGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAY 192
L D +S+ + C S L G Q H L I G+ + ++L+ +Y +C +
Sbjct: 439 LDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGV 498
Query: 193 RVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSG 252
+F+ M ER+VVSWT II GF Q RV+ FH M ++PN T+ LLSAC SG
Sbjct: 499 VLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSG 558
Query: 253 ALGYGRGA-HCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM-VGRDVVTWNSM 310
L R + G YL ++ + + G+ +A + M + D W S+
Sbjct: 559 LLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSL 618
Query: 311 IAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSL 345
+ H A + E+++K G D Y SL
Sbjct: 619 LTACGTHKNAGLVTVIAEKLLK-GFPDDPSVYTSL 652
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 147/354 (41%), Gaps = 49/354 (13%)
Query: 129 MEQE-LGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCA- 186
M++E L +D L + +C L G Q HC + +G ++ + S+LI +YS C
Sbjct: 229 MQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGS 288
Query: 187 --LSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSL 244
+ D + + +V W ++++GF + L L + S++ + +T +
Sbjct: 289 LIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGA 348
Query: 245 LSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDV 304
L C+ L G H ++ G+ V + L+ +++ G I DA +F + +D+
Sbjct: 349 LKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDI 408
Query: 305 VTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCR-----------HG- 352
+ ++ +I G + G A LF E+IK G+D D ++L C HG
Sbjct: 409 IAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGL 468
Query: 353 -----------------------GLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGL 389
G + G V F+ M+E V ++ I+ G+ G
Sbjct: 469 CIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVS----WTGIIVGFGQNGR 524
Query: 390 IREARDFIE---NMPVCPNAVIWGSLLSSSRLHG---NVWIGIEAAESRLLLEP 437
+ EA + N+ + PN V + LLS+ R G +E +S LEP
Sbjct: 525 VEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEP 578
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 239 bits (609), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 132/349 (37%), Positives = 202/349 (57%), Gaps = 13/349 (3%)
Query: 169 IANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIA-----GFAQEWRVDMCL 223
+ V +++IS + A RVF+ M ERN SW +I GF E L
Sbjct: 262 VKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELE-----AL 316
Query: 224 ELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMY 283
+LF LM+ ++P + T S+LS C +L +G+ H Q+++ F ++V + L+ MY
Sbjct: 317 DLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMY 376
Query: 284 SKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQG-VDPDAVTY 342
KCG + + IF+ +D++ WNS+I+GYA HGL +EA+ +F EM G P+ VT+
Sbjct: 377 IKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTF 436
Query: 343 LSLLSSCRHGGLVKEGQVYFNSMVE-HGVQPKLDHYSCIVDLLGRAGLIREARDFIENMP 401
++ LS+C + G+V+EG + SM GV+P HY+C+VD+LGRAG EA + I++M
Sbjct: 437 VATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMT 496
Query: 402 VCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVAR 461
V P+A +WGSLL + R H + + A+ + +EP S T L+N+YAS G W VA
Sbjct: 497 VEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAE 556
Query: 462 VRKLMKDKGLKPNPGSSWIEVKSKVHRF-EAQDKSNRRMSDILLVIDSL 509
+RKLMK + ++ +PG SW EV++KVH F S+ IL ++D L
Sbjct: 557 LRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDEL 605
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 136/280 (48%), Gaps = 21/280 (7%)
Query: 171 NVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMR 230
N+ + L+S Y + +A +VF+ MPERNVVSWTA++ G+ +VD+ LF M
Sbjct: 78 NIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMP 137
Query: 231 GSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVID 290
+ N ++T +L + G + C++ +M ++I K G +D
Sbjct: 138 ----EKNKVSWTVMLIGFLQDGRIDDA----CKLYEMIPDKDNIARTSMIHGLCKEGRVD 189
Query: 291 DALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCR 350
+A IF+ M R V+TW +M+ GY Q+ +A +F+ M ++ V++ S+L
Sbjct: 190 EAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEK----TEVSWTSMLMGYV 245
Query: 351 HGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWG 410
G +++ + F M V+P + + ++ LG+ G I +AR ++M N W
Sbjct: 246 QNGRIEDAEELFEVM---PVKPVI-ACNAMISGLGQKGEIAKARRVFDSMKE-RNDASWQ 300
Query: 411 SLLSSSRLHGNVWIGIEAAESRLLLEP-GCSATLQQLANL 449
+++ ++H +EA + +L++ G T L ++
Sbjct: 301 TVI---KIHERNGFELEALDLFILMQKQGVRPTFPTLISI 337
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 144/301 (47%), Gaps = 24/301 (7%)
Query: 176 SSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMK 235
+S+++ Y + DA ++F+EMP+RN++SW +++G+ + +D ++F LM +
Sbjct: 52 NSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMP----E 107
Query: 236 PNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYI 295
N ++T+L+ + +G + ++ + S+ ++ + + G IDDA +
Sbjct: 108 RNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSW----TVMLIGFLQDGRIDDACKL 163
Query: 296 FENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLV 355
+E + +D + SMI G + G EA +F+EM ++ V +T+ ++++ V
Sbjct: 164 YEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSV----ITWTTMVTGYGQNNRV 219
Query: 356 KEGQVYFNSMVEHGVQPKLDHYSCIVDLLG--RAGLIREARDFIENMPVCPNAVIWGSLL 413
+ + F+ M P+ S L+G + G I +A + E MPV P + +++
Sbjct: 220 DDARKIFDVM------PEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKP-VIACNAMI 272
Query: 414 SSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKP 473
S G + +S ++ A+ Q + ++ G+ + + LM+ +G++P
Sbjct: 273 SGLGQKGEIAKARRVFDS---MKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRP 329
Query: 474 N 474
Sbjct: 330 T 330
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 118/233 (50%), Gaps = 13/233 (5%)
Query: 190 DAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACM 249
+A +F+EM ER+V++WT ++ G+ Q RVD ++F +M + ++TS+L +
Sbjct: 190 EAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMP----EKTEVSWTSMLMGYV 245
Query: 250 GSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNS 309
+G + ++ ++ + NA+I+ + G I A +F++M R+ +W +
Sbjct: 246 QNGRIEDAE----ELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQT 301
Query: 310 MIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHG 369
+I + ++G EA+ LF M KQGV P T +S+LS C + G+ +V
Sbjct: 302 VIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVR-- 359
Query: 370 VQPKLDHY--SCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHG 420
Q +D Y S ++ + + G + +++ + P + ++W S++S HG
Sbjct: 360 CQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFP-SKDIIMWNSIISGYASHG 411
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 46/231 (19%)
Query: 128 VMEQELGVDVCF--LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRC 185
++ Q+ GV F L +S C S L+ G Q H + F +VYV S L+++Y +C
Sbjct: 320 ILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKC 379
Query: 186 ALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGS-EMKPNYFTYTSL 244
+ +F+ P ++++ W +II+G+A + L++F M S KPN T+ +
Sbjct: 380 GELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVAT 439
Query: 245 LSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM---VG 301
LSAC S G++++ L I+E+M G
Sbjct: 440 LSAC-----------------------------------SYAGMVEEGLKIYESMESVFG 464
Query: 302 RDVVT--WNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCR 350
+T + M+ + G EA+ + + M V+PDA + SLL +CR
Sbjct: 465 VKPITAHYACMVDMLGRAGRFNEAMEMIDSMT---VEPDAAVWGSLLGACR 512
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 132/314 (42%), Gaps = 36/314 (11%)
Query: 179 ISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNY 238
I+ SR +A ++F+ +++ SW +++AG+ +LF M N
Sbjct: 24 ITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDR----NI 79
Query: 239 FTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFEN 298
++ L+S M +G + R + + S+ AL+ Y G +D A +F
Sbjct: 80 ISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSW----TALVKGYVHNGKVDVAESLFWK 135
Query: 299 MVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEG 358
M ++ V+W M+ G+ Q G +A L+ EMI D D + S++ G V E
Sbjct: 136 MPEKNKVSWTVMLIGFLQDGRIDDACKLY-EMIP---DKDNIARTSMIHGLCKEGRVDEA 191
Query: 359 QVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRL 418
+ F+ M E V ++ +V G+ + +AR + MP V W S+L
Sbjct: 192 REIFDEMSERSVIT----WTTMVTGYGQNNRVDDARKIFDVMPE-KTEVSWTSMLMGYVQ 246
Query: 419 HGNVWIGIEAAESRLLLEP-----GCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKP 473
+G IE AE + P C+A + L G ++A+ R++ +K
Sbjct: 247 NGR----IEDAEELFEVMPVKPVIACNAMISGL-------GQKGEIAKARRVF--DSMKE 293
Query: 474 NPGSSWIEVKSKVH 487
+SW V K+H
Sbjct: 294 RNDASWQTV-IKIH 306
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 9/137 (6%)
Query: 277 NALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVD 336
N I S+ G I +A +F++ + + +WNSM+AGY + + ++A LF+EM D
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM----PD 76
Query: 337 PDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDF 396
+ +++ L+S G + E + F+ M E V ++ +V G + A
Sbjct: 77 RNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVV----SWTALVKGYVHNGKVDVAESL 132
Query: 397 IENMPVCPNAVIWGSLL 413
MP N V W +L
Sbjct: 133 FWKMPE-KNKVSWTVML 148
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 238 bits (607), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 125/339 (36%), Positives = 201/339 (59%), Gaps = 3/339 (0%)
Query: 176 SSLISLYSRCALSGDAYRVFEEMP--ERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSE 233
S+++ YS+ A +F++MP +NVV+WT IIAG+A++ + L M S
Sbjct: 251 STMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASG 310
Query: 234 MKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDAL 293
+K + S+L+AC SG L G H + + S +V NAL+ MY+KCG + A
Sbjct: 311 LKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAF 370
Query: 294 YIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGG 353
+F ++ +D+V+WN+M+ G HG +EAI LF M ++G+ PD VT++++L SC H G
Sbjct: 371 DVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAG 430
Query: 354 LVKEGQVYFNSMVE-HGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSL 412
L+ EG YF SM + + + P+++HY C+VDLLGR G ++EA ++ MP+ PN VIWG+L
Sbjct: 431 LIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGAL 490
Query: 413 LSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLK 472
L + R+H V I E ++ + L+P L+N+YA+ W VA +R MK G++
Sbjct: 491 LGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVE 550
Query: 473 PNPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSLVD 511
G+S +E++ +H F DKS+ + I ++ SL++
Sbjct: 551 KPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSLIE 589
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 127/266 (47%), Gaps = 11/266 (4%)
Query: 152 DLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIA 211
+LN Q H I ++++ LIS S C + A RVF ++ E NV ++I
Sbjct: 31 NLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIR 90
Query: 212 GFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHS 271
AQ + +F M+ + + FTY LL AC G L + H I ++G S
Sbjct: 91 AHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSS 150
Query: 272 YLHVDNALIAMYSKCG--VIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEE 329
++V NALI YS+CG + DA+ +FE M RD V+WNSM+ G + G ++A LF+E
Sbjct: 151 DIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDE 210
Query: 330 MIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGL 389
M ++ D +++ ++L + + F M E +S +V +AG
Sbjct: 211 MPQR----DLISWNTMLDGYARCREMSKAFELFEKMPERNTV----SWSTMVMGYSKAGD 262
Query: 390 IREARDFIENMPV-CPNAVIWGSLLS 414
+ AR + MP+ N V W +++
Sbjct: 263 MEMARVMFDKMPLPAKNVVTWTIIIA 288
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 108/219 (49%), Gaps = 6/219 (2%)
Query: 133 LGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAY 192
L D + +++C L+ G++ H + + +N YV ++L+ +Y++C A+
Sbjct: 311 LKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAF 370
Query: 193 RVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSG 252
VF ++P++++VSW ++ G +ELF MR ++P+ T+ ++L +C +G
Sbjct: 371 DVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAG 430
Query: 253 ALGYGRGAHCQIIQMGFHSYLHVDN--ALIAMYSKCGVIDDALYIFENM-VGRDVVTWNS 309
+ G + ++ + V++ L+ + + G + +A+ + + M + +VV W +
Sbjct: 431 LIDEGIDYFYSMEKV-YDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGA 489
Query: 310 MIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSS 348
++ H A + + ++K +DP SLLS+
Sbjct: 490 LLGACRMHNEVDIAKEVLDNLVK--LDPCDPGNYSLLSN 526
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 238 bits (607), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 129/348 (37%), Positives = 209/348 (60%), Gaps = 6/348 (1%)
Query: 160 HCLAITTGFIANVYVGSSLISLYSRCALSGDAY--RVFEEMPERNVVSWTAIIAGFAQEW 217
H I GF V VG++L+ Y++ G A ++F+++ +++ VS+ +I++ +AQ
Sbjct: 206 HSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSG 265
Query: 218 RVDMCLELFH-LMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVD 276
+ E+F L++ + N T +++L A SGAL G+ H Q+I+MG + V
Sbjct: 266 MSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVG 325
Query: 277 NALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVD 336
++I MY KCG ++ A F+ M ++V +W +MIAGY HG A +A+ LF MI GV
Sbjct: 326 TSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVR 385
Query: 337 PDAVTYLSLLSSCRHGGLVKEGQVYFNSMV-EHGVQPKLDHYSCIVDLLGRAGLIREARD 395
P+ +T++S+L++C H GL EG +FN+M GV+P L+HY C+VDLLGRAG +++A D
Sbjct: 386 PNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYD 445
Query: 396 FIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLL-LEPGCSATLQQLANLYASVG 454
I+ M + P+++IW SLL++ R+H NV + E + +RL L+ L+++YA G
Sbjct: 446 LIQRMKMKPDSIIWSSLLAACRIHKNVELA-EISVARLFELDSSNCGYYMLLSHIYADAG 504
Query: 455 WWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDI 502
W V RVR +MK++GL PG S +E+ +VH F D+ + + I
Sbjct: 505 RWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKI 552
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 167/331 (50%), Gaps = 10/331 (3%)
Query: 106 NSVINHVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAIT 165
NSVI + + + + SS+ + L A+ +C S D+ G Q H A
Sbjct: 45 NSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFV 104
Query: 166 TGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLEL 225
G+ ++++V S+LI +YS C DA +VF+E+P+RN+VSWT++I G+ + L
Sbjct: 105 FGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSL 164
Query: 226 FHLMRGSE------MKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNAL 279
F + E M + S++SAC A G H +I+ GF + V N L
Sbjct: 165 FKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTL 224
Query: 280 IAMYSKCGV--IDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDP 337
+ Y+K G + A IF+ +V +D V++NS+++ YAQ G++ EA +F ++K V
Sbjct: 225 LDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVT 284
Query: 338 -DAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDF 396
+A+T ++L + H G ++ G+ + ++ G++ + + I+D+ + G + AR
Sbjct: 285 FNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKA 344
Query: 397 IENMPVCPNAVIWGSLLSSSRLHGNVWIGIE 427
+ M N W ++++ +HG+ +E
Sbjct: 345 FDRMK-NKNVRSWTAMIAGYGMHGHAAKALE 374
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 152/329 (46%), Gaps = 39/329 (11%)
Query: 198 MPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYG 257
+ + +V SW ++IA A+ L F MR + P ++ + AC + G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 258 RGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQH 317
+ H Q G+ S + V +ALI MYS CG ++DA +F+ + R++V+W SMI GY +
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 318 GLAQEAISLFEEMIKQGVDPDAVTYL------SLLSSCR-----------HGGLVKEGQV 360
G A +A+SLF++++ D D +L S++S+C H ++K G
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG-- 213
Query: 361 YFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHG 420
F+ V G LD Y+ G G + AR + + V + V + S++S ++
Sbjct: 214 -FDRGVSVG-NTLLDAYA-----KGGEGGVAVARKIFDQI-VDKDRVSYNSIMS---VYA 262
Query: 421 NVWIGIEAAE--SRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDK----GLKPN 474
+ EA E RL+ + L+ + +V + R+ K + D+ GL+ +
Sbjct: 263 QSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGAL-RIGKCIHDQVIRMGLEDD 321
Query: 475 --PGSSWIEVKSKVHRFEAQDKSNRRMSD 501
G+S I++ K R E K+ RM +
Sbjct: 322 VIVGTSIIDMYCKCGRVETARKAFDRMKN 350
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 136/364 (37%), Positives = 203/364 (55%), Gaps = 1/364 (0%)
Query: 145 SSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVV 204
S+C S L G Q HC ++ G ++ V +S++ +YS C A +F+ M R+++
Sbjct: 318 SACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDII 377
Query: 205 SWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQI 264
SW+ II G+ Q + + F MR S KP F SLLS + GR H
Sbjct: 378 SWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALA 437
Query: 265 IQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAI 324
+ G V ++LI MYSKCG I +A IF D+V+ +MI GYA+HG ++EAI
Sbjct: 438 LCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAI 497
Query: 325 SLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE-HGVQPKLDHYSCIVDL 383
LFE+ +K G PD+VT++S+L++C H G + G YFN M E + ++P +HY C+VDL
Sbjct: 498 DLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDL 557
Query: 384 LGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATL 443
L RAG + +A I M + V+W +LL + + G++ G AAE L L+P C+ L
Sbjct: 558 LCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATAL 617
Query: 444 QQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDIL 503
LAN+Y+S G + A VRK MK KG+ PG S I++K V F + D+ + + DI
Sbjct: 618 VTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIY 677
Query: 504 LVID 507
+++
Sbjct: 678 NILE 681
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 145/286 (50%), Gaps = 1/286 (0%)
Query: 128 VMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCAL 187
V++ + D LS + +CG ++ G H A+ T +++VYVGSSL+ +Y R
Sbjct: 99 VVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGK 158
Query: 188 SGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSA 247
+ RVF EMP RN V+WTAII G R L F M SE + +T+ L A
Sbjct: 159 IDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKA 218
Query: 248 CMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTW 307
C G + YG+ H +I GF + L V N+L MY++CG + D L +FENM RDVV+W
Sbjct: 219 CAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSW 278
Query: 308 NSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE 367
S+I Y + G +A+ F +M V P+ T+ S+ S+C + G+ +++
Sbjct: 279 TSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLS 338
Query: 368 HGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLL 413
G+ L + ++ + G + A + M C + + W +++
Sbjct: 339 LGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMR-CRDIISWSTII 383
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 143/283 (50%), Gaps = 3/283 (1%)
Query: 111 HVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIA 170
H G L +EMS +EL D + A+ +C R + G H I GF+
Sbjct: 186 HAGRYKEGLTYFSEMSR--SEELS-DTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVT 242
Query: 171 NVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMR 230
+ V +SL ++Y+ C D +FE M ER+VVSWT++I + + + +E F MR
Sbjct: 243 TLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMR 302
Query: 231 GSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVID 290
S++ PN T+ S+ SAC L +G HC ++ +G + L V N+++ MYS CG +
Sbjct: 303 NSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLV 362
Query: 291 DALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCR 350
A +F+ M RD+++W+++I GY Q G +E F M + G P SLLS
Sbjct: 363 SASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSG 422
Query: 351 HGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREA 393
+ +++ G+ + G++ S ++++ + G I+EA
Sbjct: 423 NMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEA 465
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 111/239 (46%), Gaps = 3/239 (1%)
Query: 191 AYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSE--MKPNYFTYTSLLSAC 248
A +VF++MP ++VSWT+II + D L LF MR + + P+ + +L AC
Sbjct: 59 ARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKAC 118
Query: 249 MGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWN 308
S + YG H ++ S ++V ++L+ MY + G ID + +F M R+ VTW
Sbjct: 119 GQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWT 178
Query: 309 SMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEH 368
++I G G +E ++ F EM + D T+ L +C VK G+ ++
Sbjct: 179 AIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVR 238
Query: 369 GVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIE 427
G L + + + G +++ ENM + V W SL+ + + G +E
Sbjct: 239 GFVTTLCVANSLATMYTECGEMQDGLCLFENMSE-RDVVSWTSLIVAYKRIGQEVKAVE 296
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 145/450 (32%), Positives = 230/450 (51%), Gaps = 65/450 (14%)
Query: 129 MEQELGVDVCFLSHAV--SSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCA 186
M QE V V + AV +C G Q H L ++++G+SL+S+YS+
Sbjct: 265 MRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLG 324
Query: 187 LSGDA-------------------------------YRVFEEMPERNVVSWTAIIAGFAQ 215
G+A Y +FE+MP +++VSWT +I GF+
Sbjct: 325 YMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSG 384
Query: 216 EWRVDMCLELF-------------------------------HLMRGSEMKPNYFTYTSL 244
+ + C+ELF H M E+ PN +T++S+
Sbjct: 385 KGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSV 444
Query: 245 LSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDV 304
LSA L G H ++++M + L V N+L++MY KCG +DA IF + ++
Sbjct: 445 LSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNI 504
Query: 305 VTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNS 364
V++N+MI+GY+ +G ++A+ LF + G +P+ VT+L+LLS+C H G V G YF S
Sbjct: 505 VSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKS 564
Query: 365 M-VEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVW 423
M + ++P DHY+C+VDLLGR+GL+ +A + I MP P++ +WGSLLS+S+ H V
Sbjct: 565 MKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVD 624
Query: 424 IGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVK 483
+ AA+ + LEP + L+ LY+ +G R+ + K K +K +PGSSWI +K
Sbjct: 625 LAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILK 684
Query: 484 SKVHRFEAQDKSNRRMSDILLVIDSLVDHM 513
+VH F A D+S + +I + + M
Sbjct: 685 GEVHNFLAGDESQLNLEEIGFTLKMIRKEM 714
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 124/255 (48%), Gaps = 18/255 (7%)
Query: 169 IANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHL 228
+ V SS++ Y + DA +F+ M ERNV++WTA+I G+ + + LF
Sbjct: 205 VKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLR 264
Query: 229 MRGS-EMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCG 287
MR ++K N T + AC G H + +M L + N+L++MYSK G
Sbjct: 265 MRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLG 324
Query: 288 VIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLS 347
+ +A +F M +D V+WNS+I G Q EA LFE+M + D V++ ++
Sbjct: 325 YMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGK----DMVSWTDMIK 380
Query: 348 SCRHGGLVKEGQVYFNSMVE-HGVQPKLDH--YSCIVDLLGRAGLIREARDFIENM---P 401
G +G++ + VE G+ P+ D+ ++ ++ G EA + M
Sbjct: 381 -----GFSGKGEI--SKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKE 433
Query: 402 VCPNAVIWGSLLSSS 416
VCPN+ + S+LS++
Sbjct: 434 VCPNSYTFSSVLSAT 448
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 116/223 (52%), Gaps = 6/223 (2%)
Query: 128 VMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCAL 187
++++E+ + S +S+ S DL G+Q H + + ++ V +SL+S+Y +C
Sbjct: 429 MLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGN 488
Query: 188 SGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSA 247
+ DAY++F + E N+VS+ +I+G++ L+LF ++ S +PN T+ +LLSA
Sbjct: 489 TNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSA 548
Query: 248 CMGSGALGYGRGAHCQIIQMGFHSYLHVDN--ALIAMYSKCGVIDDALYIFENMVGRD-V 304
C+ G + G + + ++ ++ D+ ++ + + G++DDA + M +
Sbjct: 549 CVHVGYVDLG-WKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHS 607
Query: 305 VTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLS 347
W S+++ H A +++I+ ++PD+ T +LS
Sbjct: 608 GVWGSLLSASKTHLRVDLAELAAKKLIE--LEPDSATPYVVLS 648
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 134/295 (45%), Gaps = 43/295 (14%)
Query: 177 SLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDM--CLELFHLMRGSEM 234
++IS Y+ A++VF+EMP R S+ A+I + + D+ ELF +
Sbjct: 86 AMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKN-KCDLGKAYELFCDIP---- 140
Query: 235 KPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALY 294
+ N +Y ++++ + +G + + + F + N L++ Y + G ++A+
Sbjct: 141 EKNAVSYATMITGFVRAGRFDEAEFLYAET-PVKFRDSV-ASNVLLSGYLRAGKWNEAVR 198
Query: 295 IFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGL 354
+F+ M ++VV+ +SM+ GY + G +A SLF+ M ++ V +T+ +++ G
Sbjct: 199 VFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNV----ITWTAMIDGYFKAGF 254
Query: 355 VKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLS 414
++G F M + G K++ + V + + RDF+
Sbjct: 255 FEDGFGLFLRMRQEG-DVKVNSNTLAV-------MFKACRDFVR-------------YRE 293
Query: 415 SSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDK 469
S++HG V SR+ LE L ++Y+ +G+ + V +MK+K
Sbjct: 294 GSQIHGLV--------SRMPLEFDLFLG-NSLMSMYSKLGYMGEAKAVFGVMKNK 339
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 122/351 (34%), Positives = 195/351 (55%), Gaps = 1/351 (0%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP 199
LS ++ C + G Q H L + GF ++YV ++LI +Y++C A ++F E+
Sbjct: 351 LSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELS 410
Query: 200 ERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRG 259
+N VSW +I G+ +F +++ T++S L AC ++ G
Sbjct: 411 SKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQ 470
Query: 260 AHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGL 319
H I+ + V N+LI MY+KCG I A +F M DV +WN++I+GY+ HGL
Sbjct: 471 VHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGL 530
Query: 320 AQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMV-EHGVQPKLDHYS 378
++A+ + + M + P+ +T+L +LS C + GL+ +GQ F SM+ +HG++P L+HY+
Sbjct: 531 GRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYT 590
Query: 379 CIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPG 438
C+V LLGR+G + +A IE +P P+ +IW ++LS+S N +AE L + P
Sbjct: 591 CMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPK 650
Query: 439 CSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRF 489
AT ++N+YA W VA +RK MK+ G+K PG SWIE + VH F
Sbjct: 651 DEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYF 701
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 151/323 (46%), Gaps = 37/323 (11%)
Query: 152 DLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIA 211
D GV H + T ++ + VG L+ LY++ DA++VF EMP+ +VV W+ +IA
Sbjct: 264 DFAKGV--HGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIA 321
Query: 212 GFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHS 271
F Q + ++LF MR + + PN FT +S+L+ C G G H ++++GF
Sbjct: 322 RFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDL 381
Query: 272 YLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMI 331
++V NALI +Y+KC +D A+ +F + ++ V+WN++I GY G +A S+F E +
Sbjct: 382 DIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREAL 441
Query: 332 KQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIR 391
+ V VT+ S L +C + G ++ K+ + ++D+ + G I+
Sbjct: 442 RNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIK 501
Query: 392 EARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYA 451
A+ M + W +L+S Y+
Sbjct: 502 FAQSVFNEMETI-DVASWNALISG----------------------------------YS 526
Query: 452 SVGWWNQVARVRKLMKDKGLKPN 474
+ G Q R+ +MKD+ KPN
Sbjct: 527 THGLGRQALRILDIMKDRDCKPN 549
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 125/254 (49%), Gaps = 1/254 (0%)
Query: 160 HCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRV 219
H + G+ +N +VG++LI+ YS C A VFE + +++V W I++ + +
Sbjct: 169 HSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYF 228
Query: 220 DMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNAL 279
+ L+L MR + PN +T+ + L A +G GA + +G H QI++ + V L
Sbjct: 229 EDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGL 288
Query: 280 IAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDA 339
+ +Y++ G + DA +F M DVV W+ MIA + Q+G EA+ LF M + V P+
Sbjct: 289 LQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNE 348
Query: 340 VTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIEN 399
T S+L+ C G G+ +V+ G + + ++D+ + + A
Sbjct: 349 FTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAE 408
Query: 400 MPVCPNAVIWGSLL 413
+ N V W +++
Sbjct: 409 LS-SKNEVSWNTVI 421
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 8/212 (3%)
Query: 141 SHAVSS----CGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFE 196
SHA + C K D HC + G +++ + L++ Y + DA +F+
Sbjct: 49 SHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFD 108
Query: 197 EMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGY 256
EMPERN VS+ + G+A + + + L G E+ P+ F TS L +
Sbjct: 109 EMPERNNVSFVTLAQGYACQDPIGLYSRLHR--EGHELNPHVF--TSFLKLFVSLDKAEI 164
Query: 257 GRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQ 316
H I+++G+ S V ALI YS CG +D A +FE ++ +D+V W +++ Y +
Sbjct: 165 CPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVE 224
Query: 317 HGLAQEAISLFEEMIKQGVDPDAVTYLSLLSS 348
+G ++++ L M G P+ T+ + L +
Sbjct: 225 NGYFEDSLKLLSCMRMAGFMPNNYTFDTALKA 256
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 120/259 (46%), Gaps = 9/259 (3%)
Query: 120 KTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLI 179
K + + ++ V S A+ +C S ++ GVQ H LAI T V V +SLI
Sbjct: 432 KAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLI 491
Query: 180 SLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYF 239
+Y++C A VF EM +V SW A+I+G++ L + +M+ + KPN
Sbjct: 492 DMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGL 551
Query: 240 TYTSLLSACMGSGALGYGRGAHCQIIQ-MGFHSYLHVDNALIAMYSKCGVIDDALYIFEN 298
T+ +LS C +G + G+ +I+ G L ++ + + G +D A+ + E
Sbjct: 552 TFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEG 611
Query: 299 M-VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDP-DAVTYLSLLSSCRHGGLVK 356
+ V+ W +M++ + A EE++K ++P D TY +L S + G +
Sbjct: 612 IPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILK--INPKDEATY--VLVSNMYAGAKQ 667
Query: 357 EGQV--YFNSMVEHGVQPK 373
V SM E GV+ +
Sbjct: 668 WANVASIRKSMKEMGVKKE 686
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 122/363 (33%), Positives = 200/363 (55%), Gaps = 36/363 (9%)
Query: 149 SKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTA 208
S+ ++ HCL + TG+ V ++L+ +Y++ + A +VFE M E++V+SWTA
Sbjct: 341 SRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTA 400
Query: 209 IIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMG 268
++ G D L+LF MR + P+ S+LSA L +G+ H I+ G
Sbjct: 401 LVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSG 460
Query: 269 FHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFE 328
F S L V+N+L+ MY+KCG ++DA IF +M RD++TW +I GYA++GL ++A
Sbjct: 461 FPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDA----- 515
Query: 329 EMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSM-VEHGVQPKLDHYSCIVDLLGRA 387
Q YF+SM +G+ P +HY+C++DL GR+
Sbjct: 516 ------------------------------QRYFDSMRTVYGITPGPEHYACMIDLFGRS 545
Query: 388 GLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLA 447
G + + M V P+A +W ++L++SR HGN+ G AA++ + LEP + QL+
Sbjct: 546 GDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLS 605
Query: 448 NLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVID 507
N+Y++ G ++ A VR+LMK + + PG SW+E K KVH F ++D+ + RM +I +D
Sbjct: 606 NMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVD 665
Query: 508 SLV 510
++
Sbjct: 666 EMM 668
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 151/295 (51%), Gaps = 25/295 (8%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP 199
L + C S L G Q H I TGF +V V + L+++Y++C +A +FE M
Sbjct: 128 LGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETME 187
Query: 200 -ERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGR 258
E+N V+WT+++ G++Q +E F +R + N +T+ S+L+AC A G
Sbjct: 188 GEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGV 247
Query: 259 GAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHG 318
HC I++ GF + ++V +ALI MY+KC ++ A + E M DVV+WNSMI G + G
Sbjct: 248 QVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQG 307
Query: 319 LAQEAISLFEEMIKQGVDPDAVTYLSLL------------SSCRHGGLVKEGQVYFNSMV 366
L EA+S+F M ++ + D T S+L +S H +VK G +
Sbjct: 308 LIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATY---- 363
Query: 367 EHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGN 421
KL + + +VD+ + G++ A E M + + + W +L++ + +G+
Sbjct: 364 ------KLVN-NALVDMYAKRGIMDSALKVFEGM-IEKDVISWTALVTGNTHNGS 410
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 126/239 (52%), Gaps = 2/239 (0%)
Query: 176 SSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMK 235
+++I YS DA ++F P +N +SW A+I+G+ + LF M+ +K
Sbjct: 63 NTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIK 122
Query: 236 PNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYI 295
PN +T S+L C L G H I+ GF ++V N L+AMY++C I +A Y+
Sbjct: 123 PNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYL 182
Query: 296 FENMVG-RDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGL 354
FE M G ++ VTW SM+ GY+Q+G A +AI F ++ ++G + T+ S+L++C
Sbjct: 183 FETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSA 242
Query: 355 VKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLL 413
+ G +V+ G + + S ++D+ + + AR +E M V + V W S++
Sbjct: 243 CRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEV-DDVVSWNSMI 300
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 72/151 (47%)
Query: 277 NALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVD 336
N +I YS + DA +F + ++ ++WN++I+GY + G EA +LF EM G+
Sbjct: 63 NTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIK 122
Query: 337 PDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDF 396
P+ T S+L C L+ G+ ++ G ++ + ++ + + I EA
Sbjct: 123 PNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYL 182
Query: 397 IENMPVCPNAVIWGSLLSSSRLHGNVWIGIE 427
E M N V W S+L+ +G + IE
Sbjct: 183 FETMEGEKNNVTWTSMLTGYSQNGFAFKAIE 213
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 118/340 (34%), Positives = 201/340 (59%), Gaps = 6/340 (1%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV 203
+++CG+ R L G + H IT G +NV V SSL+ +Y +C +A +VF M ++N
Sbjct: 272 LTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNS 331
Query: 204 VSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQ 263
VSW+A++ G+ Q + +E+F M + + + + ++L AC G A+ G+ H Q
Sbjct: 332 VSWSALLGGYCQNGEHEKAIEIFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHGQ 387
Query: 264 IIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEA 323
++ G + V++ALI +Y K G ID A ++ M R+++TWN+M++ AQ+G +EA
Sbjct: 388 YVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEA 447
Query: 324 ISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE-HGVQPKLDHYSCIVD 382
+S F +M+K+G+ PD ++++++L++C H G+V EG+ YF M + +G++P +HYSC++D
Sbjct: 448 VSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMID 507
Query: 383 LLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLL-LEPGCSA 441
LLGRAGL EA + +E +A +WG LL + + E R++ LEP
Sbjct: 508 LLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHM 567
Query: 442 TLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIE 481
+ L+N+Y ++G +RKLM +G+ G SWI+
Sbjct: 568 SYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWID 607
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 151/277 (54%), Gaps = 6/277 (2%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP 199
LS AV +C ++ G +H + IT GF N ++ S+L LY DA RVF+EMP
Sbjct: 166 LSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMP 225
Query: 200 ERNVVSWTAIIAGFAQEWRVDMCLELFHLM-RGSEMKPNYFTYTSLLSACMGSGALGYGR 258
E +V+ WTA+++ F++ + L LF+ M RG + P+ T+ ++L+AC L G+
Sbjct: 226 EPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGK 285
Query: 259 GAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHG 318
H ++I G S + V+++L+ MY KCG + +A +F M ++ V+W++++ GY Q+G
Sbjct: 286 EIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNG 345
Query: 319 LAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYS 378
++AI +F EM ++ D + ++L +C V+ G+ V G + S
Sbjct: 346 EHEKAIEIFREMEEK----DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVES 401
Query: 379 CIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSS 415
++DL G++G I A M + N + W ++LS+
Sbjct: 402 ALIDLYGKSGCIDSASRVYSKMSI-RNMITWNAMLSA 437
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 137/260 (52%), Gaps = 3/260 (1%)
Query: 156 GVQYHCLAITTGFIANVYVGSSLISLYSRCALS-GDAYRVFEEMPERNVVSWTAIIAGFA 214
G+Q+H + +G + VG+SL+SLY + + RVF+ ++ +SWT++++G+
Sbjct: 80 GIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYV 139
Query: 215 QEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLH 274
LE+F M + N FT +S + AC G + GR H +I GF
Sbjct: 140 TGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHF 199
Query: 275 VDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIK-Q 333
+ + L +Y DA +F+ M DV+ W ++++ ++++ L +EA+ LF M + +
Sbjct: 200 ISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGK 259
Query: 334 GVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREA 393
G+ PD T+ ++L++C + +K+G+ ++ +G+ + S ++D+ G+ G +REA
Sbjct: 260 GLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREA 319
Query: 394 RDFIENMPVCPNAVIWGSLL 413
R M N+V W +LL
Sbjct: 320 RQVFNGMSK-KNSVSWSALL 338
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 94/187 (50%), Gaps = 6/187 (3%)
Query: 232 SEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGV-ID 290
SE+ Y SLL C + +G H +++ G + +V N+L+++Y K G +
Sbjct: 55 SEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMR 114
Query: 291 DALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCR 350
+ +F+ +D ++W SM++GY +A+ +F EM+ G+D + T S + +C
Sbjct: 115 ETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACS 174
Query: 351 HGGLVKEGQVYFNSMVEHGVQPKLDHY--SCIVDLLGRAGLIREARDFIENMPVCPNAVI 408
G V+ G+ + ++ HG + +H+ S + L G +AR + MP P+ +
Sbjct: 175 ELGEVRLGRCFHGVVITHGFE--WNHFISSTLAYLYGVNREPVDARRVFDEMPE-PDVIC 231
Query: 409 WGSLLSS 415
W ++LS+
Sbjct: 232 WTAVLSA 238
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 85/181 (46%), Gaps = 11/181 (6%)
Query: 138 CFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEE 197
CF + +C + G + H + G NV V S+LI LY + A RV+ +
Sbjct: 364 CF-GTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSK 422
Query: 198 MPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYG 257
M RN+++W A+++ AQ R + + F+ M +KP+Y ++ ++L+AC +G + G
Sbjct: 423 MSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEG 482
Query: 258 RG-----AHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGR-DVVTWNSMI 311
R A I+ G Y + +I + + G+ ++A + E R D W ++
Sbjct: 483 RNYFVLMAKSYGIKPGTEHY----SCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLL 538
Query: 312 A 312
Sbjct: 539 G 539
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 122/337 (36%), Positives = 202/337 (59%), Gaps = 8/337 (2%)
Query: 157 VQYHCLAITTGFIANVYVGSSLISLYSRCALS-GDAYRVFEEMPE-RNVVSWTAIIAGFA 214
+Q H L + +G + V ++LI +YS D Y++F EM R++V+W II FA
Sbjct: 287 LQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFA 346
Query: 215 QEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLH 274
+ + + LF +R ++ P+++T++S+L AC G + H Q+I+ GF +
Sbjct: 347 V-YDPERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTV 405
Query: 275 VDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQG 334
++N+LI Y+KCG +D + +F++M RDVV+WNSM+ Y+ HG + +F++M
Sbjct: 406 LNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---D 462
Query: 335 VDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHG-VQPKLDHYSCIVDLLGRAGLIREA 393
++PD+ T+++LLS+C H G V+EG F SM E P+L+HY+C++D+L RA EA
Sbjct: 463 INPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEA 522
Query: 394 RDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAES-RLLLEPGCSATLQQLANLYAS 452
+ I+ MP+ P+AV+W +LL S R HGN +G AA+ + L+EP S + Q++N+Y +
Sbjct: 523 EEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNA 582
Query: 453 VGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRF 489
G +N+ K M+ ++ P SW E+ +KVH F
Sbjct: 583 EGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEF 619
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 116/208 (55%), Gaps = 10/208 (4%)
Query: 146 SCGSKRDLNGGV--QYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV 203
+C +R+L G+ +H L+ + NV + + LI++Y++C A +VF+ MPERNV
Sbjct: 68 ACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNV 127
Query: 204 VSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQ 263
VSWTA+I G+ Q LF M S PN FT +S+L++C G+ H
Sbjct: 128 VSWTALITGYVQAGNEQEGFCLFSSML-SHCFPNEFTLSSVLTSCRYEP----GKQVHGL 182
Query: 264 IIQMGFHSYLHVDNALIAMYSKC---GVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLA 320
+++G H ++V NA+I+MY +C +A +FE + +++VTWNSMIA + L
Sbjct: 183 ALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLG 242
Query: 321 QEAISLFEEMIKQGVDPDAVTYLSLLSS 348
++AI +F M GV D T L++ SS
Sbjct: 243 KKAIGVFMRMHSDGVGFDRATLLNICSS 270
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 106/239 (44%), Gaps = 38/239 (15%)
Query: 130 EQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSG 189
+++L D S + +C + H I GF+A+ + +SLI Y++C
Sbjct: 362 QEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLD 421
Query: 190 DAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACM 249
RVF++M R+VVSW +++ ++ +VD L +F M ++ P+ T+ +LLSAC
Sbjct: 422 LCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDSATFIALLSACS 478
Query: 250 GSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNS 309
+G + G F S L + VID M+ R
Sbjct: 479 HAGRVEEGLRI--------FRSMFEKPETLPQLNHYACVID--------MLSR------- 515
Query: 310 MIAGYAQHGLAQEAISLFEEMIKQ-GVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE 367
E + EE+IKQ +DPDAV +++LL SCR G + G++ + + E
Sbjct: 516 -----------AERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKE 563
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 235 bits (600), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 140/380 (36%), Positives = 212/380 (55%), Gaps = 6/380 (1%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP 199
L+ + +C R+L G H I + A++YV SLI LY +C + A VF +
Sbjct: 312 LTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQ 371
Query: 200 ERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRG 259
+ SW +I+ + +E++ M +KP+ T+TS+L AC AL G+
Sbjct: 372 KDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQ 431
Query: 260 AHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGL 319
H I + + + +AL+ MYSKCG +A IF ++ +DVV+W MI+ Y HG
Sbjct: 432 IHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQ 491
Query: 320 AQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSM-VEHGVQPKLDHYS 378
+EA+ F+EM K G+ PD VT L++LS+C H GL+ EG +F+ M ++G++P ++HYS
Sbjct: 492 PREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYS 551
Query: 379 CIVDLLGRAGLIREARDFIENMP-VCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLE- 436
C++D+LGRAG + EA + I+ P NA + +L S+ LH +G A RLL+E
Sbjct: 552 CMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIA--RLLVEN 609
Query: 437 -PGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKS 495
P ++T L NLYAS W+ RVR MK+ GL+ PG SWIE+ KV F A+D+S
Sbjct: 610 YPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRS 669
Query: 496 NRRMSDILLVIDSLVDHMSS 515
+ R ++ + L HM S
Sbjct: 670 HLRAENVYECLALLSGHMES 689
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 122/233 (52%)
Query: 156 GVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQ 215
G H L + +G++ +V V SSL+ +Y++ L ++ +VF+EMPER+V SW +I+ F Q
Sbjct: 126 GRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQ 185
Query: 216 EWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHV 275
+ LELF M S +PN + T +SAC L G+ H + ++ GF +V
Sbjct: 186 SGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYV 245
Query: 276 DNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGV 335
++AL+ MY KC ++ A +F+ M + +V WNSMI GY G ++ + + MI +G
Sbjct: 246 NSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGT 305
Query: 336 DPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAG 388
P T S+L +C + G+ ++ V + ++DL + G
Sbjct: 306 RPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCG 358
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 148/282 (52%), Gaps = 1/282 (0%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP 199
L+ A+S+C L G + H + GF + YV S+L+ +Y +C A VF++MP
Sbjct: 211 LTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMP 270
Query: 200 ERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRG 259
+++V+W ++I G+ + C+E+ + M +P+ T TS+L AC S L +G+
Sbjct: 271 RKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKF 330
Query: 260 AHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGL 319
H +I+ ++ ++V+ +LI +Y KCG + A +F +WN MI+ Y G
Sbjct: 331 IHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGN 390
Query: 320 AQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSC 379
+A+ ++++M+ GV PD VT+ S+L +C +++G+ S+ E ++ S
Sbjct: 391 WFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSA 450
Query: 380 IVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGN 421
++D+ + G +EA ++P + V W ++S+ HG
Sbjct: 451 LLDMYSKCGNEKEAFRIFNSIPK-KDVVSWTVMISAYGSHGQ 491
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 150/284 (52%), Gaps = 14/284 (4%)
Query: 160 HCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPER-NVVSWTAIIAGFAQEWR 218
H +T G +V + SLI++Y C A VFE R +V W ++++G+++
Sbjct: 27 HQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSM 86
Query: 219 VDMCLELF-HLMRGSEMKPNYFTYTSLLSACMGSGALG---YGRGAHCQIIQMGFHSYLH 274
LE+F L+ S P+ FT+ +++ A GALG GR H +++ G+ +
Sbjct: 87 FHDTLEVFKRLLNCSICVPDSFTFPNVIKA---YGALGREFLGRMIHTLVVKSGYVCDVV 143
Query: 275 VDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQG 334
V ++L+ MY+K + +++L +F+ M RDV +WN++I+ + Q G A++A+ LF M G
Sbjct: 144 VASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSG 203
Query: 335 VDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHY--SCIVDLLGRAGLIRE 392
+P++V+ +S+C ++ G+ V+ G + LD Y S +VD+ G+ +
Sbjct: 204 FEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFE--LDEYVNSALVDMYGKCDCLEV 261
Query: 393 ARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLE 436
AR+ + MP + V W S++ G+ +E +R+++E
Sbjct: 262 AREVFQKMPR-KSLVAWNSMIKGYVAKGDSKSCVEIL-NRMIIE 303
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 235 bits (599), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 116/329 (35%), Positives = 200/329 (60%), Gaps = 2/329 (0%)
Query: 176 SSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMK 235
+S+++ Y +C + +A +F+EMP RN+ +W+ +I G+A+ + ++LF M+ +
Sbjct: 187 TSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVV 246
Query: 236 PNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYI 295
N S++S+C GAL +G A+ +++ L + AL+ M+ +CG I+ A+++
Sbjct: 247 ANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHV 306
Query: 296 FENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLV 355
FE + D ++W+S+I G A HG A +A+ F +MI G P VT+ ++LS+C HGGLV
Sbjct: 307 FEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLV 366
Query: 356 KEG-QVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLS 414
++G ++Y N +HG++P+L+HY CIVD+LGRAG + EA +FI M V PNA I G+LL
Sbjct: 367 EKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLG 426
Query: 415 SSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPN 474
+ +++ N + + ++P S L+N+YA G W+++ +R +MK+K +K
Sbjct: 427 ACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKP 486
Query: 475 PGSSWIEVKSKVHRFE-AQDKSNRRMSDI 502
PG S IE+ K+++F D+ + M I
Sbjct: 487 PGWSLIEIDGKINKFTMGDDQKHPEMGKI 515
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 145/316 (45%), Gaps = 42/316 (13%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISL-------YSRCALSGDAYRVFE 196
+ SC S DL H + T I++V+V S L++L L G AY +F
Sbjct: 19 LQSCSSFSDLK---IIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75
Query: 197 EMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGY 256
++ N+ + +I F+ + M S + P+ T+ L+ A +
Sbjct: 76 QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLV 135
Query: 257 GRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQ 316
G H QI++ GF + ++V+N+L+ MY+ CG I A IF M RDVV+W SM+AGY +
Sbjct: 136 GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCK 195
Query: 317 HGLA-------------------------------QEAISLFEEMIKQGVDPDAVTYLSL 345
G+ ++AI LFE M ++GV + +S+
Sbjct: 196 CGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSV 255
Query: 346 LSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPN 405
+SSC H G ++ G+ + +V+ + L + +VD+ R G I +A E +P +
Sbjct: 256 ISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPE-TD 314
Query: 406 AVIWGSLLSSSRLHGN 421
++ W S++ +HG+
Sbjct: 315 SLSWSSIIKGLAVHGH 330
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 77/172 (44%), Gaps = 5/172 (2%)
Query: 143 AVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERN 202
+SSC L G + + + + N+ +G++L+ ++ RC A VFE +PE +
Sbjct: 255 VISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETD 314
Query: 203 VVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHC 262
+SW++II G A + F M P T+T++LSAC G + G +
Sbjct: 315 SLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYE 374
Query: 263 QIIQ-MGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAG 313
+ + G L ++ M + G + +A EN + + V N+ I G
Sbjct: 375 NMKKDHGIEPRLEHYGCIVDMLGRAGKLAEA----ENFILKMHVKPNAPILG 422
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 235 bits (599), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 130/346 (37%), Positives = 197/346 (56%), Gaps = 5/346 (1%)
Query: 156 GVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPER-NVVSWTAIIAGFA 214
G Q H LA+ ++LI+ Y +C ++F M ER + V+W ++I+G+
Sbjct: 536 GKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYI 595
Query: 215 QEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLH 274
+ L+L M + + + F Y ++LSA L G H ++ S +
Sbjct: 596 HNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVV 655
Query: 275 VDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQG 334
V +AL+ MYSKCG +D AL F M R+ +WNSMI+GYA+HG +EA+ LFE M G
Sbjct: 656 VGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDG 715
Query: 335 -VDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE-HGVQPKLDHYSCIVDLLGRAGLIRE 392
PD VT++ +LS+C H GL++EG +F SM + +G+ P+++H+SC+ D+LGRAG + +
Sbjct: 716 QTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDK 775
Query: 393 ARDFIENMPVCPNAVIWGSLLSS-SRLHG-NVWIGIEAAESRLLLEPGCSATLQQLANLY 450
DFIE MP+ PN +IW ++L + R +G +G +AAE LEP + L N+Y
Sbjct: 776 LEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMY 835
Query: 451 ASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSN 496
A+ G W + + RK MKD +K G SW+ +K VH F A DKS+
Sbjct: 836 AAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSH 881
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 127/265 (47%), Gaps = 10/265 (3%)
Query: 158 QYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEW 217
Q C +G + +++VGS L+S +++ A +VF +M RN V+ ++ G ++
Sbjct: 229 QIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQK 288
Query: 218 RVDMCLELFHLMRGS-EMKPNYFTYTSLLS-----ACMGSGALGYGRGAHCQIIQMGFHS 271
+ +LF M ++ P +Y LLS + L GR H +I G
Sbjct: 289 WGEEATKLFMDMNSMIDVSPE--SYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVD 346
Query: 272 YL-HVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEM 330
++ + N L+ MY+KCG I DA +F M +D V+WNSMI G Q+G EA+ ++ M
Sbjct: 347 FMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSM 406
Query: 331 IKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLI 390
+ + P + T +S LSSC K GQ ++ G+ + + ++ L G +
Sbjct: 407 RRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYL 466
Query: 391 REARDFIENMPVCPNAVIWGSLLSS 415
E R +MP + V W S++ +
Sbjct: 467 NECRKIFSSMPE-HDQVSWNSIIGA 490
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 148/318 (46%), Gaps = 3/318 (0%)
Query: 106 NSVINHVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAIT 165
NS+I + N ++ S+ ++ L ++SSC S + G Q H ++
Sbjct: 384 NSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLK 443
Query: 166 TGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWR-VDMCLE 224
G NV V ++L++LY+ + ++F MPE + VSW +II A+ R + +
Sbjct: 444 LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVV 503
Query: 225 LFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYS 284
F + + K N T++S+LSA G+ H ++ +NALIA Y
Sbjct: 504 CFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYG 563
Query: 285 KCGVIDDALYIFENMVG-RDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYL 343
KCG +D IF M RD VTWNSMI+GY + L +A+ L M++ G D+ Y
Sbjct: 564 KCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYA 623
Query: 344 SLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVC 403
++LS+ ++ G V ++ + S +VD+ + G + A F MPV
Sbjct: 624 TVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPV- 682
Query: 404 PNAVIWGSLLSSSRLHGN 421
N+ W S++S HG
Sbjct: 683 RNSYSWNSMISGYARHGQ 700
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 128/264 (48%), Gaps = 2/264 (0%)
Query: 153 LNGGVQYHCLAITTGFIA-NVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIA 211
L G + H ITTG + V +G+ L+++Y++C DA RVF M +++ VSW ++I
Sbjct: 329 LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMIT 388
Query: 212 GFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHS 271
G Q +E + MR ++ P FT S LS+C G+ H + +++G
Sbjct: 389 GLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDL 448
Query: 272 YLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLA-QEAISLFEEM 330
+ V NAL+ +Y++ G +++ IF +M D V+WNS+I A+ + EA+ F
Sbjct: 449 NVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNA 508
Query: 331 IKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLI 390
+ G + +T+ S+LS+ + G+ +++ + + + ++ G+ G +
Sbjct: 509 QRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEM 568
Query: 391 REARDFIENMPVCPNAVIWGSLLS 414
M + V W S++S
Sbjct: 569 DGCEKIFSRMAERRDNVTWNSMIS 592
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 98/181 (54%), Gaps = 3/181 (1%)
Query: 171 NVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMR 230
+VY+ ++LI+ Y S A +VF+EMP RN VSW I++G+++ L M
Sbjct: 35 DVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMV 94
Query: 231 GSEMKPNYFTYTSLLSACMGSGALG--YGRGAHCQIIQMGFHSYLHVDNALIAMYSKC-G 287
+ N + + S+L AC G++G +GR H + ++ + V N LI+MY KC G
Sbjct: 95 KEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIG 154
Query: 288 VIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLS 347
+ AL F ++ ++ V+WNS+I+ Y+Q G + A +F M G P T+ SL++
Sbjct: 155 SVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVT 214
Query: 348 S 348
+
Sbjct: 215 T 215
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 143/311 (45%), Gaps = 14/311 (4%)
Query: 156 GVQYHCLAITTGFIANVYVGSSLISLYSRCALS-GDAYRVFEEMPERNVVSWTAIIAGFA 214
G Q H L + + V + LIS+Y +C S G A F ++ +N VSW +II+ ++
Sbjct: 123 GRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYS 182
Query: 215 QEWRVDMCLELFHLMRGSEMKPNYFTYTSLL-SAC-MGSGALGYGRGAHCQIIQMGFHSY 272
Q +F M+ +P +T+ SL+ +AC + + C I + G +
Sbjct: 183 QAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTD 242
Query: 273 LHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIK 332
L V + L++ ++K G + A +F M R+ VT N ++ G + +EA LF +M
Sbjct: 243 LFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM-N 301
Query: 333 QGVDPDAVTYLSLLSS------CRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGR 386
+D +Y+ LLSS GL K +V+ + + V + + +V++ +
Sbjct: 302 SMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAK 361
Query: 387 AGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAES--RLLLEPGCSATLQ 444
G I +AR M ++V W S+++ +G +E +S R + PG +
Sbjct: 362 CGSIADARRVFYFMTD-KDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLIS 420
Query: 445 QLANLYASVGW 455
L++ AS+ W
Sbjct: 421 SLSSC-ASLKW 430
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 105/223 (47%), Gaps = 4/223 (1%)
Query: 135 VDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRV 194
+D + +S+ S L G++ H ++ ++V VGS+L+ +YS+C A R
Sbjct: 617 LDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRF 676
Query: 195 FEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMR-GSEMKPNYFTYTSLLSACMGSGA 253
F MP RN SW ++I+G+A+ + + L+LF M+ + P++ T+ +LSAC +G
Sbjct: 677 FNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGL 736
Query: 254 LGYG-RGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGR-DVVTWNSMI 311
L G + G + + + + + G +D E M + +V+ W +++
Sbjct: 737 LEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVL 796
Query: 312 AGYAQ-HGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGG 353
+ +G E EM+ Q +AV Y+ L + GG
Sbjct: 797 GACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGG 839
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 71/134 (52%), Gaps = 6/134 (4%)
Query: 243 SLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGR 302
S + +C+G G R H ++ + +++ N LI Y + G A +F+ M R
Sbjct: 8 SFVQSCVGH--RGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLR 65
Query: 303 DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYF 362
+ V+W +++GY+++G +EA+ +M+K+G+ + ++S+L +C+ G V + F
Sbjct: 66 NCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVG---ILF 122
Query: 363 NSMVEHGVQPKLDH 376
+ HG+ KL +
Sbjct: 123 GRQI-HGLMFKLSY 135
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 235 bits (599), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 135/440 (30%), Positives = 225/440 (51%), Gaps = 40/440 (9%)
Query: 111 HVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKR-DLNGGVQYHCLAITTGFI 169
H G + L EM +E E D S +++C + ++ G H + + G+
Sbjct: 181 HCGKLESCLSLFKEM---LESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWS 237
Query: 170 ANVYVGSSLISLYSRCALSGDAYR-------------------------------VFEEM 198
+ V +S++S Y++ DA R VF
Sbjct: 238 SAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLA 297
Query: 199 PERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGR 258
PE+N+V+WT +I G+ + + L F M S + ++F Y ++L AC G LG+G+
Sbjct: 298 PEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGK 357
Query: 259 GAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHG 318
H +I GF Y +V NAL+ +Y+KCG I +A F ++ +D+V+WN+M+ + HG
Sbjct: 358 MIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHG 417
Query: 319 LAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMV-EHGVQPKLDHY 377
LA +A+ L++ MI G+ PD VT++ LL++C H GLV+EG + F SMV ++ + ++DH
Sbjct: 418 LADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHV 477
Query: 378 SCIVDLLGRAGLIREARDFIEN----MPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRL 433
+C++D+ GR G + EA+D + N W +LL + H + +G E ++
Sbjct: 478 TCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLK 537
Query: 434 LLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQD 493
+ EP + L+NLY S G W + VR+ M ++G+K PG SWIEV ++V F D
Sbjct: 538 IAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGD 597
Query: 494 KSNRRMSDILLVIDSLVDHM 513
S+ R+ ++ ++ L M
Sbjct: 598 SSHPRLEELSETLNCLQHEM 617
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 163/342 (47%), Gaps = 66/342 (19%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFE------- 196
+S+C S ++ G + L I +GF A++ V +SLI +Y +C+ + A +VF
Sbjct: 77 LSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSR 136
Query: 197 --------------------------EMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMR 230
EMP+R +W +I+G A +++ CL LF M
Sbjct: 137 NEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEML 196
Query: 231 GSEMKPNYFTYTSLLSACMG-SGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVI 289
SE KP+ +T++SL++AC S + YGR H +++ G+ S + N++++ Y+K G
Sbjct: 197 ESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSR 256
Query: 290 DDALYIFENM-----------------VG--------------RDVVTWNSMIAGYAQHG 318
DDA+ E++ +G +++VTW +MI GY ++G
Sbjct: 257 DDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNG 316
Query: 319 LAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYS 378
++A+ F EM+K GVD D Y ++L +C L+ G++ ++ G Q +
Sbjct: 317 DGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGN 376
Query: 379 CIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHG 420
+V+L + G I+EA ++ + V W ++L + +HG
Sbjct: 377 ALVNLYAKCGDIKEADRAFGDIAN-KDLVSWNTMLFAFGVHG 417
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 130/274 (47%), Gaps = 35/274 (12%)
Query: 176 SSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMK 235
+S I+ ++ A +VF+ MPE + V+W ++ +++ + LF +R S+ K
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 236 PNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCG-------V 288
P+ +++T++LS C G + +GR +I+ GF + L V+N+LI MY KC V
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKV 127
Query: 289 IDD--------------------------ALYIFENMVGRDVVTWNSMIAGYAQHGLAQE 322
D AL +F M R WN MI+G+A G +
Sbjct: 128 FRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLES 187
Query: 323 AISLFEEMIKQGVDPDAVTYLSLLSSCR-HGGLVKEGQVYFNSMVEHGVQPKLDHYSCIV 381
+SLF+EM++ PD T+ SL+++C V G++ M+++G ++ + ++
Sbjct: 188 CLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVL 247
Query: 382 DLLGRAGLIREARDFIENMPVCPNAVIWGSLLSS 415
+ G +A +E++ V V W S++ +
Sbjct: 248 SFYTKLGSRDDAMRELESIEVLTQ-VSWNSIIDA 280
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 235 bits (599), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 120/335 (35%), Positives = 199/335 (59%)
Query: 146 SCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVS 205
+C + R+ G H L + GF ++++V S+L+ +Y A ++F++MP R+ V
Sbjct: 143 ACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVL 202
Query: 206 WTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQII 265
+TA+ G+ Q+ + L +F M S + SLL AC GAL +G+ H I
Sbjct: 203 YTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCI 262
Query: 266 QMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAIS 325
+ L++ NA+ MY KC ++D A +F NM RDV++W+S+I GY G +
Sbjct: 263 RRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFK 322
Query: 326 LFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLG 385
LF+EM+K+G++P+AVT+L +LS+C HGGLV++ +YF M E+ + P+L HY+ + D +
Sbjct: 323 LFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQEYNIVPELKHYASVADCMS 382
Query: 386 RAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQ 445
RAGL+ EA F+E+MPV P+ + G++LS +++GNV +G A + L+P ++
Sbjct: 383 RAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVT 442
Query: 446 LANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWI 480
LA LY++ G +++ +R+ MK+K + PG S I
Sbjct: 443 LAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 124/259 (47%), Gaps = 3/259 (1%)
Query: 166 TGFIANVYVGSSLISLYSRCA-LSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLE 224
T +NV + S L+ YS+ L + VF MP RN+ SW II F++ ++
Sbjct: 60 TFLYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSID 119
Query: 225 LFHLM-RGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMY 283
LF M R S ++P+ FT +L AC S G H +++GF S L V +AL+ MY
Sbjct: 120 LFLRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMY 179
Query: 284 SKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYL 343
G + A +F++M RD V + +M GY Q G A +++F EM G D+V +
Sbjct: 180 VDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMV 239
Query: 344 SLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVC 403
SLL +C G +K G+ + L+ + I D+ + ++ A NM
Sbjct: 240 SLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSR- 298
Query: 404 PNAVIWGSLLSSSRLHGNV 422
+ + W SL+ L G+V
Sbjct: 299 RDVISWSSLILGYGLDGDV 317
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 121/293 (41%), Gaps = 58/293 (19%)
Query: 129 MEQELG-----VDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYS 183
M +E+G +D + + +CG L G H I + +G+++ +Y
Sbjct: 222 MFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYV 281
Query: 184 RCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTS 243
+C++ A+ VF M R+V+SW+++I G+ + V M +LF M ++PN T+
Sbjct: 282 KCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLG 341
Query: 244 LLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRD 303
+LSAC AH G+++ + F M +
Sbjct: 342 VLSAC-----------AH------------------------GGLVEKSWLYFRLMQEYN 366
Query: 304 VVT----WNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQ 359
+V + S+ ++ GL +EA E+M V PD ++LS C+ G V+ G+
Sbjct: 367 IVPELKHYASVADCMSRAGLLEEAEKFLEDM---PVKPDEAVMGAVLSGCKVYGNVEVGE 423
Query: 360 VYFNSMVEHGVQP-KLDHYSCIVDLLGRAGLIREARDF--------IENMPVC 403
+++ ++P K +Y + L AG EA I +P C
Sbjct: 424 RVARELIQ--LKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGC 474
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 127/352 (36%), Positives = 195/352 (55%), Gaps = 3/352 (0%)
Query: 131 QELGV--DVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALS 188
Q LG+ D + +SSC + G HC + T + V +SLI LY +
Sbjct: 425 QNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDL 484
Query: 189 GDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSAC 248
A+R+F E + NV++W A+IA + + + + LF M KP+ T +LL AC
Sbjct: 485 TVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMAC 543
Query: 249 MGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWN 308
+ +G+L G+ H I + L + ALI MY+KCG ++ + +F+ +D V WN
Sbjct: 544 VNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWN 603
Query: 309 SMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEH 368
MI+GY HG + AI+LF++M + V P T+L+LLS+C H GLV++G+ F M ++
Sbjct: 604 VMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQY 663
Query: 369 GVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEA 428
V+P L HYSC+VDLL R+G + EA + +MP P+ VIWG+LLSS HG +GI
Sbjct: 664 DVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRM 723
Query: 429 AESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWI 480
AE + +P LAN+Y++ G W + R R++M++ G+ G S +
Sbjct: 724 AERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 115/229 (50%), Gaps = 4/229 (1%)
Query: 144 VSSCGSKRDLNGGVQYHCLAIT-TGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERN 202
VS+C + G H L + GF N VG+S + YS+C DA VF+EMP+R+
Sbjct: 132 VSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRD 191
Query: 203 VVSWTAIIAGFAQEWRVDMCLELFHLMR--GSEM-KPNYFTYTSLLSACMGSGALGYGRG 259
VV+WTAII+G Q + L M GS++ KPN T AC GAL GR
Sbjct: 192 VVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRC 251
Query: 260 AHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGL 319
H ++ G S V +++ + YSK G +A F + D+ +W S+IA A+ G
Sbjct: 252 LHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGD 311
Query: 320 AQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEH 368
+E+ +F EM +G+ PD V L++ LV +G+ + ++ H
Sbjct: 312 MEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRH 360
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 133/272 (48%), Gaps = 5/272 (1%)
Query: 146 SCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVS 205
+C + L G H A+ G ++ +V SS+ S YS+ +AY F E+ + ++ S
Sbjct: 239 ACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFS 298
Query: 206 WTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQII 265
WT+IIA A+ ++ ++F M+ M P+ + L++ + G+ H +I
Sbjct: 299 WTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVI 358
Query: 266 QMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGR-DVVTWNSMIAGYAQHGLAQEAI 324
+ F V N+L++MY K ++ A +F + + WN+M+ GY + + I
Sbjct: 359 RHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCI 418
Query: 325 SLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLL 384
LF ++ G++ D+ + S++SSC H G V G+ +V+ + + + ++DL
Sbjct: 419 ELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLY 478
Query: 385 GRAGLIREA-RDFIENMPVCPNAVIWGSLLSS 415
G+ G + A R F E N + W ++++S
Sbjct: 479 GKMGDLTVAWRMFCE---ADTNVITWNAMIAS 507
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 112/251 (44%), Gaps = 4/251 (1%)
Query: 147 CGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSW 206
C L +++ L IT G N++V S LIS Y+ + RVF + R++ W
Sbjct: 34 CDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLW 93
Query: 207 TAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQ 266
+II L F M S P++FT ++SAC G H +++
Sbjct: 94 NSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLK 153
Query: 267 M-GFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAIS 325
GF V + + YSKCG + DA +F+ M RDVV W ++I+G+ Q+G ++ +
Sbjct: 154 HGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLG 213
Query: 326 LFEEMIKQGVD---PDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVD 382
+M G D P+ T +C + G +KEG+ V++G+ S +
Sbjct: 214 YLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFS 273
Query: 383 LLGRAGLIREA 393
++G EA
Sbjct: 274 FYSKSGNPSEA 284
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 131/359 (36%), Positives = 203/359 (56%), Gaps = 2/359 (0%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP 199
S A+S+ G H G+ +V+VG++L+S+Y + + A +VF+ M
Sbjct: 405 FSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMK 464
Query: 200 ERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRG 259
ER+VV WT +I G ++ ++ ++ F M + + + F+ +S++ AC L G
Sbjct: 465 ERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEV 524
Query: 260 AHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGL 319
HC I+ GF + V AL+ MY K G + A IF D+ WNSM+ Y+QHG+
Sbjct: 525 FHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGM 584
Query: 320 AQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSC 379
++A+S FE++++ G PDAVTYLSLL++C H G +G+ +N M E G++ HYSC
Sbjct: 585 VEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQGIKAGFKHYSC 644
Query: 380 IVDLLGRAGLIREARDFIENMPVCPN-AVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPG 438
+V+L+ +AGL+ EA + IE P N A +W +LLS+ N+ IG+ AAE L L+P
Sbjct: 645 MVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPE 704
Query: 439 CSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEV-KSKVHRFEAQDKSN 496
+AT L+NLYA G W VA +R+ ++ +PG SWIEV + F + D+SN
Sbjct: 705 DTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGDQSN 763
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 138/280 (49%), Gaps = 9/280 (3%)
Query: 147 CGSKRDLNGGVQYHCLAITTGFIANV---YVGSSLISLYSRCALSGDAYRVFEEMPERNV 203
C S L Q H L +T G A Y ++LIS+Y RC A +VF++MP RNV
Sbjct: 104 CVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNV 163
Query: 204 VSWTAIIAGFAQEWRVDMCLELFHL---MRGSEMKPNYFTYTSLLSACMGSGALGYGRGA 260
VS+ A+ + +++ D F L M +KPN T+TSL+ C + G
Sbjct: 164 VSYNALYSAYSRN--PDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSL 221
Query: 261 HCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLA 320
+ QII++G+ + V +++ MYS CG ++ A IF+ + RD V WN+MI G ++
Sbjct: 222 NSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKI 281
Query: 321 QEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCI 380
++ + F M+ GVDP TY +L+ C G G++ ++ L + +
Sbjct: 282 EDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNAL 341
Query: 381 VDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHG 420
+D+ G +REA ++ PN V W S++S +G
Sbjct: 342 LDMYCSCGDMREAF-YVFGRIHNPNLVSWNSIISGCSENG 380
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 168/352 (47%), Gaps = 23/352 (6%)
Query: 134 GVDVCFLSHAV--SSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDA 191
GVD ++++ + C + G H I + +A++ + ++L+ +Y C +A
Sbjct: 295 GVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREA 354
Query: 192 YRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFH-LMRGSEMKPNYFTYTSLLSACMG 250
+ VF + N+VSW +II+G ++ + + ++ L+R S +P+ +T+++ +SA
Sbjct: 355 FYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAE 414
Query: 251 SGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSM 310
+G+ H Q+ ++G+ + V L++MY K + A +F+ M RDVV W M
Sbjct: 415 PERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEM 474
Query: 311 IAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGV 370
I G+++ G ++ A+ F EM ++ D + S++ +C ++++G+V+ + G
Sbjct: 475 IVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGF 534
Query: 371 QPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAE 430
+ +VD+ G+ G E + I ++ P+ W S+L + HG V + E
Sbjct: 535 DCVMSVCGALVDMYGKNGKY-ETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFE 593
Query: 431 SRLLLEPGCSATLQQLANLYASVG----------WWNQVARVRKLMKDKGLK 472
+LE G +L A+ WNQ MK++G+K
Sbjct: 594 Q--ILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQ-------MKEQGIK 636
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 121/234 (51%), Gaps = 7/234 (2%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV 203
V C D+ G + I G+ NV V +S++ +YS C A R+F+ + R+
Sbjct: 206 VQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDA 265
Query: 204 VSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQ 263
V+W +I G + +++ L F M S + P FTY+ +L+ C G+ G+ H +
Sbjct: 266 VAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHAR 325
Query: 264 IIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEA 323
II + L +DNAL+ MY CG + +A Y+F + ++V+WNS+I+G +++G ++A
Sbjct: 326 IIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQA 385
Query: 324 ISLFEEMIKQGVD-PDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDH 376
+ ++ +++ PD T+ + +S+ E + + + + HG KL +
Sbjct: 386 MLMYRRLLRMSTPRPDEYTFSAAISA------TAEPERFVHGKLLHGQVTKLGY 433
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 125/270 (46%), Gaps = 23/270 (8%)
Query: 173 YVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLEL------- 225
Y ++LIS+Y RC+ A +VF++MP+RN+V+ + A F E+ V M L
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVF--EY-VSMGSSLHSQIIKL 79
Query: 226 --FHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYL---HVDNALI 280
F ++ + + L C+ L R H ++ G + + +N LI
Sbjct: 80 GSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLI 139
Query: 281 AMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQH-GLAQEAISLFEEMIKQGVDPDA 339
+MY +CG ++ A +F+ M R+VV++N++ + Y+++ A A L M + V P++
Sbjct: 140 SMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNS 199
Query: 340 VTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIEN 399
T+ SL+ C V G + +++ G + + ++ + G + AR +
Sbjct: 200 STFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFD- 258
Query: 400 MPVCPN---AVIWGSLLSSSRLHGNVWIGI 426
C N AV W +++ S + + G+
Sbjct: 259 ---CVNNRDAVAWNTMIVGSLKNDKIEDGL 285
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 131/385 (34%), Positives = 202/385 (52%), Gaps = 32/385 (8%)
Query: 129 MEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALS 188
M E D L+ +++C L G Q HC A G I ++ V S+L+ +YS+C
Sbjct: 310 MRNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSP 369
Query: 189 -------------------------------GDAYRVFEEMPERNVVSWTAIIAGFAQEW 217
DA RVFE + ++++SW ++ GF+Q
Sbjct: 370 MEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNG 429
Query: 218 RVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDN 277
LE FH M ++ + + +S++SAC +L G + +G S V +
Sbjct: 430 CTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSS 489
Query: 278 ALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDP 337
+LI +Y KCG ++ +F+ MV D V WNSMI+GYA +G EAI LF++M G+ P
Sbjct: 490 SLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRP 549
Query: 338 DAVTYLSLLSSCRHGGLVKEGQVYFNSM-VEHGVQPKLDHYSCIVDLLGRAGLIREARDF 396
+T++ +L++C + GLV+EG+ F SM V+HG P +H+SC+VDLL RAG + EA +
Sbjct: 550 TQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINL 609
Query: 397 IENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWW 456
+E MP + +W S+L +G +G +AAE + LEP S QL+ ++A+ G W
Sbjct: 610 VEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDW 669
Query: 457 NQVARVRKLMKDKGLKPNPGSSWIE 481
A VRKLM++ + NPGSSW +
Sbjct: 670 ESSALVRKLMRENNVTKNPGSSWTD 694
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 131/286 (45%), Gaps = 36/286 (12%)
Query: 176 SSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMK 235
S+LIS Y+ C ++ +F+ R V+ W ++I+G+ L LF+ MR +E +
Sbjct: 257 SALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMR-NETR 315
Query: 236 PNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGV------- 288
+ T ++++AC+G G L G+ HC + G + V + L+ MYSKCG
Sbjct: 316 EDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKL 375
Query: 289 ------------------------IDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAI 324
IDDA +FE + + +++WNSM G++Q+G E +
Sbjct: 376 FSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETL 435
Query: 325 SLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLL 384
F +M K + D V+ S++S+C ++ G+ F G+ S ++DL
Sbjct: 436 EYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLY 495
Query: 385 GRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAE 430
+ G + R + M V + V W S++S +G G EA +
Sbjct: 496 CKCGFVEHGRRVFDTM-VKSDEVPWNSMISGYATNGQ---GFEAID 537
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 115/243 (47%), Gaps = 5/243 (2%)
Query: 106 NSVINHVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAIT 165
NS+ N N T++T + + +L D LS +S+C S L G Q A
Sbjct: 419 NSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATI 478
Query: 166 TGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLEL 225
G ++ V SSLI LY +C RVF+ M + + V W ++I+G+A + ++L
Sbjct: 479 VGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDL 538
Query: 226 FHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGA-HCQIIQMGFHSYLHVDNALIAMYS 284
F M + ++P T+ +L+AC G + GR + GF + ++ + +
Sbjct: 539 FKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLA 598
Query: 285 KCGVIDDALYIFENM-VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPD-AVTY 342
+ G +++A+ + E M D W+S++ G +G E++I+ ++P+ +V Y
Sbjct: 599 RAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIE--LEPENSVAY 656
Query: 343 LSL 345
+ L
Sbjct: 657 VQL 659
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 123/279 (44%), Gaps = 46/279 (16%)
Query: 125 MSSVMEQELGVDVC--FLSHAVSSCGSKRDLNGGVQYHCLAITTGFIAN-VYVGSSLISL 181
+SS Q + VD C + + SC S+ Q + L + GF+++ V V + L+ +
Sbjct: 13 LSSSFLQAMEVD-CRRYYVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQM 71
Query: 182 YSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTY 241
YSR G A +F+EMP+RN SW +I G+ L F +M P Y
Sbjct: 72 YSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMM------PERDGY 125
Query: 242 TSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVG 301
+ N +++ ++K G + A +F M
Sbjct: 126 SW---------------------------------NVVVSGFAKAGELSVARRLFNAMPE 152
Query: 302 RDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVY 361
+DVVT NS++ GY +G A+EA+ LF+E+ DA+T ++L +C +K G+
Sbjct: 153 KDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADAITLTTVLKACAELEALKCGKQI 209
Query: 362 FNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENM 400
++ GV+ S +V++ + G +R A +E +
Sbjct: 210 HAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQI 248
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 117/282 (41%), Gaps = 60/282 (21%)
Query: 171 NVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMR 230
N + +++I Y G + R F+ MPER+ SW +++GFA+ + + LF+ M
Sbjct: 92 NYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMP 151
Query: 231 GSEM----------------------------KPNYFTYTSLLSACMGSGALGYGRGAHC 262
++ + T T++L AC AL G+ H
Sbjct: 152 EKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADAITLTTVLKACAELEALKCGKQIHA 211
Query: 263 QIIQMGFHSYLHVDNALIAMYSKCGVIDDALY---------------------------- 294
QI+ G ++++L+ +Y+KCG + A Y
Sbjct: 212 QILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNE 271
Query: 295 ---IFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRH 351
+F+ R V+ WNSMI+GY + + EA+ LF EM + D+ T +++++C
Sbjct: 272 SRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEM-RNETREDSRTLAAVINACIG 330
Query: 352 GGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREA 393
G ++ G+ + G+ + S ++D+ + G EA
Sbjct: 331 LGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEA 372
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 127/340 (37%), Positives = 201/340 (59%), Gaps = 1/340 (0%)
Query: 171 NVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMR 230
+V +S+I +++C L A +F+EMP+RN VSW ++I+GF + R L++F M+
Sbjct: 191 DVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQ 250
Query: 231 GSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVID 290
++KP+ FT SLL+AC GA GR H I++ F V ALI MY KCG I+
Sbjct: 251 EKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIE 310
Query: 291 DALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCR 350
+ L +FE + + WNSMI G A +G + A+ LF E+ + G++PD+V+++ +L++C
Sbjct: 311 EGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACA 370
Query: 351 HGGLVKEGQVYFNSMVE-HGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIW 409
H G V +F M E + ++P + HY+ +V++LG AGL+ EA I+NMPV + VIW
Sbjct: 371 HSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIW 430
Query: 410 GSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDK 469
SLLS+ R GNV + AA+ L+P + L+N YAS G + + R LMK++
Sbjct: 431 SSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKER 490
Query: 470 GLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSL 509
++ G S IEV +VH F + ++ + ++I ++D L
Sbjct: 491 QMEKEVGCSSIEVDFEVHEFISCGGTHPKSAEIYSLLDIL 530
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 136/306 (44%), Gaps = 45/306 (14%)
Query: 145 SSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGD---AYRVFEEMPER 201
+ C + R+L Q H I TG I++ S +++ CA D AY VF + +
Sbjct: 33 TQCSTMRELK---QIHASLIKTGLISDTVTASRVLAFC--CASPSDMNYAYLVFTRINHK 87
Query: 202 NVVSWTAIIAGFAQEWRVDMCLELF--HLMRGSEMKPNYFTYTSLLSACMGSGALGYGRG 259
N W II GF++ +M + +F L +KP TY S+ A G GR
Sbjct: 88 NPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQ 147
Query: 260 AHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGL 319
H +I+ G + N ++ MY CG + +A IF M+G DVV WNSMI G+A+ GL
Sbjct: 148 LHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGL 207
Query: 320 A-------------------------------QEAISLFEEMIKQGVDPDAVTYLSLLSS 348
++A+ +F EM ++ V PD T +SLL++
Sbjct: 208 IDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNA 267
Query: 349 CRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMP----VCP 404
C + G ++G+ +V + + + ++D+ + G I E + E P C
Sbjct: 268 CAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCW 327
Query: 405 NAVIWG 410
N++I G
Sbjct: 328 NSMILG 333
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 91/198 (45%), Gaps = 18/198 (9%)
Query: 160 HCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRV 219
H + F N V ++LI +Y +C + VFE P++ + W ++I G A
Sbjct: 281 HEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFE 340
Query: 220 DMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALG-----YGRGAHCQIIQMGFHSYLH 274
+ ++LF + S ++P+ ++ +L+AC SG + + +I+ Y
Sbjct: 341 ERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTL 400
Query: 275 VDNALIAMYSKCGVIDDALYIFENM-VGRDVVTWNSMIAGYAQHG---LAQEAISLFEEM 330
+ N L G++++A + +NM V D V W+S+++ + G +A+ A +++
Sbjct: 401 MVNVL----GGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKL 456
Query: 331 IKQGVDPDAVTYLSLLSS 348
DPD LLS+
Sbjct: 457 -----DPDETCGYVLLSN 469
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 128/351 (36%), Positives = 206/351 (58%), Gaps = 5/351 (1%)
Query: 176 SSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMK 235
+++I Y R +A ++F++MPER+++SWTA+I GF ++ + L F M+ S +K
Sbjct: 144 NTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVK 203
Query: 236 PNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYI 295
P+Y + L+AC GAL +G H ++ F + + V N+LI +Y +CG ++ A +
Sbjct: 204 PDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQV 263
Query: 296 FENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLV 355
F NM R VV+WNS+I G+A +G A E++ F +M ++G PDAVT+ L++C H GLV
Sbjct: 264 FYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLV 323
Query: 356 KEGQVYFNSM-VEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLS 414
+EG YF M ++ + P+++HY C+VDL RAG + +A +++MP+ PN V+ GSLL+
Sbjct: 324 EEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLA 383
Query: 415 SSRLHGNVWIGIEAAESRLL-LEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKP 473
+ HGN + E L L + L+N+YA+ G W +++R+ MK GLK
Sbjct: 384 ACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKK 443
Query: 474 NPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSLVDHMSSLSLQSHMYE 524
PG S IE+ +H F A D ++ + I V++ + S L LQ + E
Sbjct: 444 QPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLELIS---SDLRLQGCVVE 491
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 7/204 (3%)
Query: 136 DVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVF 195
D + A+++C + L+ G+ H ++ F NV V +SLI LY RC A +VF
Sbjct: 205 DYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVF 264
Query: 196 EEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALG 255
M +R VVSW ++I GFA L F M+ KP+ T+T L+AC G +
Sbjct: 265 YNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVE 324
Query: 256 YGRGAHCQIIQMGFHSYLHVDN--ALIAMYSKCGVIDDALYIFENMVGR-DVVTWNSMIA 312
G + QI++ + +++ L+ +YS+ G ++DAL + ++M + + V S++A
Sbjct: 325 EGL-RYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLA 383
Query: 313 GYAQHGLAQEAISLFEEMIKQGVD 336
+ HG I L E ++K D
Sbjct: 384 ACSNHG---NNIVLAERLMKHLTD 404
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 109/253 (43%), Gaps = 35/253 (13%)
Query: 203 VVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSAC--MGSGALGYGRGA 260
VSWT+ I + R+ + F M + ++PN+ T+ +LLS C SG+ G
Sbjct: 36 TVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLL 95
Query: 261 HCQIIQMGF-HSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGY----- 314
H ++G +++ V A+I MYSK G A +F+ M ++ VTWN+MI GY
Sbjct: 96 HGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQ 155
Query: 315 --------------------------AQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSS 348
+ G +EA+ F EM GV PD V ++ L++
Sbjct: 156 VDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNA 215
Query: 349 CRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVI 408
C + G + G ++ + + + ++DL R G + AR NM V
Sbjct: 216 CTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEK-RTVVS 274
Query: 409 WGSLLSSSRLHGN 421
W S++ +GN
Sbjct: 275 WNSVIVGFAANGN 287
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 130/381 (34%), Positives = 215/381 (56%), Gaps = 6/381 (1%)
Query: 139 FLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEM 198
F+ A+S G D + G H + GF V + L+ +Y + A +FE M
Sbjct: 114 FVVKAISQLG---DFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESM 170
Query: 199 PERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGR 258
+++V+W A +A Q + LE F+ M ++ + FT S+LSAC G+L G
Sbjct: 171 QVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGE 230
Query: 259 GAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHG 318
+ + + + V+NA + M+ KCG + A +FE M R+VV+W++MI GYA +G
Sbjct: 231 EIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNG 290
Query: 319 LAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE---HGVQPKLD 375
++EA++LF M +G+ P+ VT+L +LS+C H GLV EG+ YF+ MV+ ++P+ +
Sbjct: 291 DSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKE 350
Query: 376 HYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLL 435
HY+C+VDLLGR+GL+ EA +FI+ MPV P+ IWG+LL + +H ++ +G + A+ +
Sbjct: 351 HYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVET 410
Query: 436 EPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKS 495
P + L+N+YA+ G W+ V +VR M+ G K S +E + K+H F DKS
Sbjct: 411 APDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKS 470
Query: 496 NRRMSDILLVIDSLVDHMSSL 516
+ + I +D ++ + +
Sbjct: 471 HPQSKAIYEKLDEILKKIRKM 491
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 123/267 (46%), Gaps = 7/267 (2%)
Query: 158 QYHCLAITTGFIANVYVGSSLISLYSRCALSGD---AYRVFEEMPERNVVSWTAIIAGFA 214
+ H + + TGF S L L + GD A +VF+EM + + W + G+
Sbjct: 29 KIHAIVLRTGFSEK---NSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYV 85
Query: 215 QEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLH 274
+ L L+ MR ++P+ FTY ++ A G G H +++ GF
Sbjct: 86 RNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGI 145
Query: 275 VDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQG 334
V L+ MY K G + A ++FE+M +D+V WN+ +A Q G + A+ F +M
Sbjct: 146 VATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADA 205
Query: 335 VDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREAR 394
V D+ T +S+LS+C G ++ G+ ++ + + + + +D+ + G AR
Sbjct: 206 VQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAAR 265
Query: 395 DFIENMPVCPNAVIWGSLLSSSRLHGN 421
E M N V W +++ ++G+
Sbjct: 266 VLFEEMKQ-RNVVSWSTMIVGYAMNGD 291
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 130/352 (36%), Positives = 198/352 (56%), Gaps = 3/352 (0%)
Query: 131 QELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGD 190
Q L D LS +SSC R L GG Q H + I T N ++ S LI++YS C
Sbjct: 410 QNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEI 469
Query: 191 AYRVFEE-MPERNVVSWTAIIAGFAQEWRVDMCLELFHLM-RGSEMKPNYFTYTSLLSAC 248
+ +F++ + E ++ W ++I+GF L LF M + + + PN ++ ++LS+C
Sbjct: 470 SECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSC 529
Query: 249 MGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWN 308
+L +GR H +++ G+ S V+ AL MY KCG ID A F+ ++ ++ V WN
Sbjct: 530 SRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWN 589
Query: 309 SMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE- 367
MI GY +G EA+ L+ +MI G PD +T++S+L++C H GLV+ G +SM
Sbjct: 590 EMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRI 649
Query: 368 HGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIE 427
HG++P+LDHY CIVD LGRAG + +A E P ++V+W LLSS R+HG+V +
Sbjct: 650 HGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARR 709
Query: 428 AAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSW 479
AE + L+P SA L+N Y+S+ W+ A ++ LM + PG SW
Sbjct: 710 VAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSW 761
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 134/241 (55%), Gaps = 10/241 (4%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGD-AYRVFEEM 198
L+ +S+C D G++ H +A+ TG N++VG++L+S+Y++C D RVFE +
Sbjct: 141 LASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESL 200
Query: 199 PERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACM---GSGALG 255
+ N VS+TA+I G A+E +V +++F LM ++ + +++LS G +L
Sbjct: 201 SQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLS 260
Query: 256 ------YGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNS 309
G+ HC +++GF LH++N+L+ +Y+K ++ A IF M +VV+WN
Sbjct: 261 EIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNI 320
Query: 310 MIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHG 369
MI G+ Q + +++ M G P+ VT +S+L +C G V+ G+ F+S+ +
Sbjct: 321 MIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPS 380
Query: 370 V 370
V
Sbjct: 381 V 381
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 155/372 (41%), Gaps = 87/372 (23%)
Query: 106 NSVINHVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAVS------SCGSKRDLNG---G 156
+VI + L+ + E+ + VD LS+ +S C S ++ G G
Sbjct: 209 TAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELG 268
Query: 157 VQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQE 216
Q HCLA+ GF ++++ +SL+ +Y++ A +F EMPE NVVSW +I GF QE
Sbjct: 269 KQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQE 328
Query: 217 WRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVD 276
+R D +E MR S +PN T S+L AC SG + GR
Sbjct: 329 YRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGR------------------ 370
Query: 277 NALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVD 336
IF ++ V WN+M++GY+ + +EAIS F +M Q +
Sbjct: 371 -----------------RIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLK 413
Query: 337 PDAVTYLSLLSSCRH----------GGLVKEGQVYFNSMVEHGVQP------KLDHYSCI 380
PD T +LSSC G+V ++ NS + G+ K++ CI
Sbjct: 414 PDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECI 473
Query: 381 VD---------------------LLGRAGLIREARDFIENMPVCPNAVIWGSLLSS---- 415
D +L LI R + +CPN + ++LSS
Sbjct: 474 FDDCINELDIACWNSMISGFRHNMLDTKALIL-FRRMHQTAVLCPNETSFATVLSSCSRL 532
Query: 416 -SRLHGNVWIGI 426
S LHG + G+
Sbjct: 533 CSLLHGRQFHGL 544
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 124/242 (51%), Gaps = 6/242 (2%)
Query: 177 SLISLYSRCALSGD---AYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSE 233
+ IS+ C SGD R+F +P+ +V +W A+++G++ + + F M+
Sbjct: 352 TCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQN 411
Query: 234 MKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDAL 293
+KP+ T + +LS+C L G+ H +I+ H+ + LIA+YS+C ++ +
Sbjct: 412 LKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISE 471
Query: 294 YIFENMVGR-DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGV-DPDAVTYLSLLSSCRH 351
IF++ + D+ WNSMI+G+ + L +A+ LF M + V P+ ++ ++LSSC
Sbjct: 472 CIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSR 531
Query: 352 GGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGS 411
+ G+ + +V+ G + + D+ + G I AR F + + + N VIW
Sbjct: 532 LCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAV-LRKNTVIWNE 590
Query: 412 LL 413
++
Sbjct: 591 MI 592
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 106/199 (53%), Gaps = 2/199 (1%)
Query: 169 IANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHL 228
+ +VY ++ ++ + G+A VF+ MPER+VVSW +I+ ++ + L ++
Sbjct: 69 VRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKR 128
Query: 229 MRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCG- 287
M P+ FT S+LSAC +G H ++ G + V NAL++MY+KCG
Sbjct: 129 MVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGF 188
Query: 288 VIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLS 347
++D + +FE++ + V++ ++I G A+ EA+ +F M ++GV D+V ++LS
Sbjct: 189 IVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILS 248
Query: 348 -SCRHGGLVKEGQVYFNSM 365
S G ++Y N +
Sbjct: 249 ISAPREGCDSLSEIYGNEL 267
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 36/192 (18%)
Query: 234 MKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDAL 293
MK + + LL + G Y R ++ +S+ NA + K G + +A
Sbjct: 37 MKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSW----NAFLTFRCKVGDLGEAC 92
Query: 294 YIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCR--- 350
+F+ M RDVV+WN+MI+ + G ++A+ +++ M+ G P T S+LS+C
Sbjct: 93 EVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVL 152
Query: 351 --------HGGLVKEG---QVYFNS-----------MVEHGV-------QPKLDHYSCIV 381
HG VK G ++ + +V++GV QP Y+ ++
Sbjct: 153 DGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVI 212
Query: 382 DLLGRAGLIREA 393
L R + EA
Sbjct: 213 GGLARENKVLEA 224
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 257 GRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQ 316
G+ H I++MG S ++ N L+ +Y +CG D A +F+ M RDV +WN+ + +
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 317 HGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQP 372
G EA +F+ M ++ D V++ +++S G ++ V + MV G P
Sbjct: 85 VGDLGEACEVFDGMPER----DVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLP 136
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 232 bits (591), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 129/362 (35%), Positives = 214/362 (59%), Gaps = 8/362 (2%)
Query: 156 GVQYHCLAITTG-FIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFA 214
G Q HC + G F+++ +V + ++ +Y L DA +VF+E+P+ +VV W ++ G+
Sbjct: 135 GKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYV 194
Query: 215 QEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMG-FHSYL 273
+ LE+F M ++P+ F+ T+ L+AC GAL G+ H + + S +
Sbjct: 195 RCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDV 254
Query: 274 HVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQ 333
V AL+ MY+KCG I+ A+ +FE + R+V +W ++I GYA +G A++A + + + ++
Sbjct: 255 FVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIERE 314
Query: 334 -GVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSM-VEHGVQPKLDHYSCIVDLLGRAGLIR 391
G+ PD+V L +L++C HGG ++EG+ +M +G+ PK +HYSCIVDL+ RAG +
Sbjct: 315 DGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLD 374
Query: 392 EARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGC----SATLQQLA 447
+A D IE MP+ P A +WG+LL+ R H NV +G A ++ L LE G A L QL+
Sbjct: 375 DALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLS 434
Query: 448 NLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVID 507
N+Y SV + +VR +++ +G++ PG S +EV V +F + D S+ + I +I
Sbjct: 435 NIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPNLLQIHTLIH 494
Query: 508 SL 509
L
Sbjct: 495 LL 496
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 232 bits (591), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 126/375 (33%), Positives = 207/375 (55%), Gaps = 2/375 (0%)
Query: 156 GVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQ 215
G Q H A+ G + N +V LI +YS+C DA FE MPE+ V+W +IAG+A
Sbjct: 243 GKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYAL 302
Query: 216 EWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHV 275
+ L L + MR S + + FT + ++ L + AH +I+ GF S +
Sbjct: 303 HGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVA 362
Query: 276 DNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGV 335
+ AL+ YSK G +D A Y+F+ + +++++WN+++ GYA HG +A+ LFE+MI V
Sbjct: 363 NTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANV 422
Query: 336 DPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE-HGVQPKLDHYSCIVDLLGRAGLIREAR 394
P+ VT+L++LS+C + GL ++G F SM E HG++P+ HY+C+++LLGR GL+ EA
Sbjct: 423 APNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAI 482
Query: 395 DFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVG 454
FI P+ +W +LL++ R+ N+ +G AE + P + N+Y S+G
Sbjct: 483 AFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMG 542
Query: 455 WWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSLVDH-M 513
+ A V + ++ KGL P +W+EV + H F + D+ + + I VD M
Sbjct: 543 KTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQIYQKVDELM 602
Query: 514 SSLSLQSHMYEEENI 528
+S + EE+++
Sbjct: 603 EEISEYGYSEEEQHL 617
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 137/277 (49%), Gaps = 1/277 (0%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV 203
V +C + + + + ++ GF Y+ + ++ ++ +C + DA R+F+E+PERN+
Sbjct: 130 VEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNL 189
Query: 204 VSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQ 263
S+ +II+GF ELF +M T+ +L A G G++ G+ H
Sbjct: 190 YSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVC 249
Query: 264 IIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEA 323
+++G V LI MYSKCG I+DA FE M + V WN++IAGYA HG ++EA
Sbjct: 250 ALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEA 309
Query: 324 ISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDL 383
+ L +M GV D T ++ ++ + S++ +G + ++ + +VD
Sbjct: 310 LCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDF 369
Query: 384 LGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHG 420
+ G + AR + +P N + W +L+ HG
Sbjct: 370 YSKWGRVDTARYVFDKLPR-KNIISWNALMGGYANHG 405
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 98/204 (48%), Gaps = 2/204 (0%)
Query: 218 RVDMCLELFHLMR-GSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVD 276
R ELF ++ K TY +L+ AC+ ++ + + ++ GF ++
Sbjct: 102 RFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMM 161
Query: 277 NALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVD 336
N ++ M+ KCG+I DA +F+ + R++ ++ S+I+G+ G EA LF+ M ++ D
Sbjct: 162 NRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSD 221
Query: 337 PDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDF 396
+ T+ +L + G + G+ ++ GV ++D+ + G I +AR
Sbjct: 222 CETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCA 281
Query: 397 IENMPVCPNAVIWGSLLSSSRLHG 420
E MP V W ++++ LHG
Sbjct: 282 FECMPE-KTTVAWNNVIAGYALHG 304
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 231 bits (590), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 215/383 (56%), Gaps = 10/383 (2%)
Query: 106 NSVINHV---GSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCL 162
NSVI+ G +L +L+ MS E ++ D+ L +S+ G+ + G +H L
Sbjct: 549 NSVISGCASSGHHLESLRAFQAMSR--EGKIRHDLITLLGTISASGNLGLVLQGRCFHGL 606
Query: 163 AITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMC 222
AI + + + ++LI++Y RC A +VF + + N+ SW +I+ +Q
Sbjct: 607 AIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQN---KAG 663
Query: 223 LELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAM 282
E+F L R +++PN T+ LLSA G+ YG AHC +I+ GF + V AL+ M
Sbjct: 664 REVFQLFRNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDM 723
Query: 283 YSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQG-VDPDAVT 341
YS CG+++ + +F N + WNS+I+ + HG+ ++A+ LF+E+ ++P+ +
Sbjct: 724 YSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSS 783
Query: 342 YLSLLSSCRHGGLVKEGQVYFNSMVEH-GVQPKLDHYSCIVDLLGRAGLIREARDFIENM 400
++SLLS+C H G + EG Y+ M E GV+P +H IVD+LGRAG +REA +FI +
Sbjct: 784 FISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGI 843
Query: 401 PVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVA 460
A +WG+LLS+ HG+ +G E AE +EP ++ LAN Y +G W +
Sbjct: 844 GEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAV 903
Query: 461 RVRKLMKDKGLKPNPGSSWIEVK 483
R+RK+++D LK PG S I+V+
Sbjct: 904 RLRKMVEDNALKKLPGYSVIDVR 926
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 140/267 (52%), Gaps = 9/267 (3%)
Query: 160 HCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRV 219
HCLAI TG + + + ++L++LY++ A VF M R++VSW I+
Sbjct: 211 HCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHP 270
Query: 220 DMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVD--N 277
L+ F M GS + + T++ ++SAC L G H +I+ G+ HV N
Sbjct: 271 RKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGN 330
Query: 278 ALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVD- 336
++I+MYSKCG + A +FE +V RDV++ N+++ G+A +G+ +EA + +M Q VD
Sbjct: 331 SIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQM--QSVDK 388
Query: 337 --PDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPK-LDHYSCIVDLLGRAGLIREA 393
PD T +S+ S C +EG+ V +Q + L+ + ++D+ G+ GL +A
Sbjct: 389 IQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQA 448
Query: 394 RDFIENMPVCPNAVIWGSLLSSSRLHG 420
+ + + V W S++S+ +G
Sbjct: 449 -ELLFKTTTHRDLVSWNSMISAFSQNG 474
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 152/292 (52%), Gaps = 14/292 (4%)
Query: 67 ANKELANALRILNLVSPKKSASDIENRRSHLRLIEDMLENSVINHVGSNLATLKTTTEMS 126
+ L NAL +NL + ++ S E +H+ + + N+++ +N K+
Sbjct: 221 GDSSLCNAL--MNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFK 278
Query: 127 SVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFI--ANVYVGSSLISLYSR 184
S+ D S +S+C S +L G H L I +G+ A+V VG+S+IS+YS+
Sbjct: 279 SMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSK 338
Query: 185 CALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRG-SEMKPNYFTYTS 243
C + A VFEE+ R+V+S AI+ GFA + + + M+ +++P+ T S
Sbjct: 339 CGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVS 398
Query: 244 LLSACMGSGALGY---GRGAHCQIIQMGFHSY-LHVDNALIAMYSKCGVIDDALYIFENM 299
+ S C G L + GR H ++M S L V N++I MY KCG+ A +F+
Sbjct: 399 ITSIC---GDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTT 455
Query: 300 VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQ--GVDPDAVTYLSLLSSC 349
RD+V+WNSMI+ ++Q+G +A +LF+E++ + T L++L+SC
Sbjct: 456 THRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSC 507
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 128/291 (43%), Gaps = 56/291 (19%)
Query: 174 VGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSE 233
V +S+I +Y +C L+ A +F+ R++VSW ++I+ F+Q LF + SE
Sbjct: 431 VINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVV-SE 489
Query: 234 MKPNYF---TYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVID 290
+ F T ++L++C S +L +G+ HC + K G +
Sbjct: 490 YSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWL-------------------QKLGDLT 530
Query: 291 DALYIFENMV-GRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQG-VDPDAVTYLSLLSS 348
A E M RD+ +WNS+I+G A G E++ F+ M ++G + D +T L +S+
Sbjct: 531 SAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISA 590
Query: 349 CRHGGLVKEGQVY----FNSMVEHGVQ---------------------------PKLDHY 377
+ GLV +G+ + S+ E Q P L +
Sbjct: 591 SGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSW 650
Query: 378 SCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEA 428
+C++ L + RE N+ + PN + + LLS+S G+ G++A
Sbjct: 651 NCVISALSQNKAGREVFQLFRNLKLEPNEITFVGLLSASTQLGSTSYGMQA 701
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 127/271 (46%), Gaps = 19/271 (7%)
Query: 160 HCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWR- 218
HC A+ G + ++ S L++ Y R + +F+E+ E++V+ W ++I Q R
Sbjct: 110 HCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRY 169
Query: 219 ---VDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGA---HCQIIQMGFHSY 272
V + +E+ H K N F T+LL A +L R HC I+ G
Sbjct: 170 IAAVGLFIEMIH-------KGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGD 222
Query: 273 LHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIK 332
+ NAL+ +Y+K + A +F +M RD+V+WN+++ +G ++++ F+ M
Sbjct: 223 SSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTG 282
Query: 333 QGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSC---IVDLLGRAGL 389
G + D VT+ ++S+C + G+ +++ G P+ H S I+ + + G
Sbjct: 283 SGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEA-HVSVGNSIISMYSKCGD 341
Query: 390 IREARDFIENMPVCPNAVIWGSLLSSSRLHG 420
A E + VC + + ++L+ +G
Sbjct: 342 TEAAETVFEEL-VCRDVISSNAILNGFAANG 371
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%)
Query: 258 RGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQH 317
R HC ++ G L + L+ Y + G + + +F+ + +DV+ WNSMI Q+
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQN 166
Query: 318 GLAQEAISLFEEMIKQGVDPD 338
G A+ LF EMI +G + D
Sbjct: 167 GRYIAAVGLFIEMIHKGNEFD 187
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 231 bits (590), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 124/373 (33%), Positives = 198/373 (53%), Gaps = 3/373 (0%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV 203
+ +C + DL G + H LAI G V V ++L+ +Y +C +AY VF +P ++V
Sbjct: 271 LQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDV 330
Query: 204 VSWTAIIAGFAQEWRVDMCLELFHLMR-GSEMKPNYFTYTSLLSACMGSGALGYGRGAHC 262
VSW A+I+GF +E F +M + +P+ +L +C G L + H
Sbjct: 331 VSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHS 390
Query: 263 QIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQE 322
+I+ GF S + +L+ +YS+CG + +A +F + +D V W S+I GY HG +
Sbjct: 391 YVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTK 450
Query: 323 AISLFEEMIKQG-VDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMV-EHGVQPKLDHYSCI 380
A+ F M+K V P+ VT+LS+LS+C H GL+ EG F MV ++ + P L+HY+ +
Sbjct: 451 ALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVL 510
Query: 381 VDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCS 440
VDLLGR G + A + + MP P I G+LL + R+H N + A+ LE +
Sbjct: 511 VDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHA 570
Query: 441 ATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMS 500
++N+Y G W V ++R +K +G+K S IE++ KVHRF A D+ +
Sbjct: 571 GYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKE 630
Query: 501 DILLVIDSLVDHM 513
+ ++ L HM
Sbjct: 631 PVYGLLKELDLHM 643
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 187/369 (50%), Gaps = 13/369 (3%)
Query: 126 SSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLA---ITTGFIANVYVGSSLISLY 182
S + E D L A+ +CG R++N G H +T G +++YVGSSLI +Y
Sbjct: 49 SHMFRDEEKPDNFTLPVALKACGELREVNYGEMIHGFVKKDVTLG--SDLYVGSSLIYMY 106
Query: 183 SRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLM-RGSEMKPNYFTY 241
+C +A R+F+E+ + ++V+W+++++GF + +E F M S++ P+ T
Sbjct: 107 IKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTL 166
Query: 242 TSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVG 301
+L+SAC GR H +I+ GF + L + N+L+ Y+K +A+ +F+ +
Sbjct: 167 ITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAE 226
Query: 302 RDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVY 361
+DV++W+++IA Y Q+G A EA+ +F +M+ G +P+ T L +L +C +++G+
Sbjct: 227 KDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKT 286
Query: 362 FNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGN 421
+ G++ ++ + +VD+ + EA +P + V W +L+S L+G
Sbjct: 287 HELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPR-KDVVSWVALISGFTLNGM 345
Query: 422 VWIGIEAAESRLLLEPGCSATLQQLANLYAS---VGWWNQVARVRKLMKDKGLKPNP--G 476
IE S +LLE + + S +G+ Q + G NP G
Sbjct: 346 AHRSIEEF-SIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIG 404
Query: 477 SSWIEVKSK 485
+S +E+ S+
Sbjct: 405 ASLVELYSR 413
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 170/352 (48%), Gaps = 7/352 (1%)
Query: 128 VMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCAL 187
VM ++ D L VS+C + G H I GF ++ + +SL++ Y++
Sbjct: 154 VMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRA 213
Query: 188 SGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSA 247
+A +F+ + E++V+SW+ +IA + Q L +F+ M +PN T +L A
Sbjct: 214 FKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQA 273
Query: 248 CMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTW 307
C + L GR H I+ G + + V AL+ MY KC ++A +F + +DVV+W
Sbjct: 274 CAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSW 333
Query: 308 NSMIAGYAQHGLAQEAISLFEEM-IKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMV 366
++I+G+ +G+A +I F M ++ PDA+ + +L SC G +++ + + + ++
Sbjct: 334 VALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVI 393
Query: 367 EHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGI 426
++G + +V+L R G + A + + + V+W SL++ +HG +
Sbjct: 394 KYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIAL-KDTVVWTSLITGYGIHGKGTKAL 452
Query: 427 EAAESRLL---LEPGCSATLQQLANLYASVGWWNQVARVRKLM-KDKGLKPN 474
E + ++P T + + + G ++ R+ KLM D L PN
Sbjct: 453 ETFNHMVKSSEVKPN-EVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPN 503
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 119/229 (51%), Gaps = 3/229 (1%)
Query: 188 SGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSA 247
S DA ++F EM +R++ W ++ ++E + + L F M E KP+ FT L A
Sbjct: 10 SVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKA 69
Query: 248 CMGSGALGYGRGAHCQIIQ-MGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVT 306
C + YG H + + + S L+V ++LI MY KCG + +AL +F+ + D+VT
Sbjct: 70 CGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVT 129
Query: 307 WNSMIAGYAQHGLAQEAISLFEEMI-KQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSM 365
W+SM++G+ ++G +A+ F M+ V PD VT ++L+S+C + G+ +
Sbjct: 130 WSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFV 189
Query: 366 VEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLS 414
+ G L + +++ ++ +EA + + M + + W ++++
Sbjct: 190 IRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFK-MIAEKDVISWSTVIA 237
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 231 bits (589), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 129/367 (35%), Positives = 219/367 (59%), Gaps = 13/367 (3%)
Query: 156 GVQYHCLAITTG-FIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFA 214
G Q HC + G F+++ +V + ++ +Y L DA +VF+E+P+ +VV W ++ G+
Sbjct: 135 GKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYV 194
Query: 215 QEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGF-HSYL 273
+ LE+F M ++P+ F+ T+ L+AC GAL G+ H + + + S +
Sbjct: 195 RCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDV 254
Query: 274 HVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQ 333
V AL+ MY+KCG I+ A+ +F+ + R+V +W ++I GYA +G A++A++ E + ++
Sbjct: 255 FVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLERE 314
Query: 334 -GVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSM-VEHGVQPKLDHYSCIVDLLGRAGLIR 391
G+ PD+V L +L++C HGG ++EG+ +M + + PK +HYSCIVDL+ RAG +
Sbjct: 315 DGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLD 374
Query: 392 EARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGC----SATLQQLA 447
+A + IE MP+ P A +WG+LL+ R H NV +G A ++ L LE G A L QL+
Sbjct: 375 DALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLS 434
Query: 448 NLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDI----- 502
N+Y SV + ++VR +++ +G++ PG S +EV V +F + D S+ + I
Sbjct: 435 NIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSHPNLLQIHTVIH 494
Query: 503 LLVIDSL 509
LL +D+L
Sbjct: 495 LLSVDAL 501
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 128/271 (47%), Gaps = 12/271 (4%)
Query: 160 HCLAITTGFIANVYVGSSLISLYSRCALSGD----AYRVFEEMPERNVVSWTAIIAGFAQ 215
H L I G N Y S L++ + A +F+ + N + +I ++
Sbjct: 31 HSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSR 90
Query: 216 EWRVDMCLELFHLMRGSE---MKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMG-FHS 271
+ + L F LM E + P+Y T+ L+ AC+ + G+ HC +++ G F S
Sbjct: 91 SSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLS 150
Query: 272 YLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMI 331
HV ++ +Y + ++ DA +F+ + DVV W+ ++ GY + GL E + +F EM+
Sbjct: 151 DSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREML 210
Query: 332 KQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHY--SCIVDLLGRAGL 389
+G++PD + + L++C G + +G+ + + V+ + D + + +VD+ + G
Sbjct: 211 VKGLEPDEFSVTTALTACAQVGALAQGK-WIHEFVKKKSWIESDVFVGTALVDMYAKCGC 269
Query: 390 IREARDFIENMPVCPNAVIWGSLLSSSRLHG 420
I A + + + N W +L+ +G
Sbjct: 270 IETAVEVFKKLTR-RNVFSWAALIGGYAAYG 299
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 118/358 (32%), Positives = 204/358 (56%), Gaps = 1/358 (0%)
Query: 153 LNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAG 212
L G H ++ GF ++ +V +SLI++Y++C + +F + RN+++W A++A
Sbjct: 463 LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAA 522
Query: 213 FAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSY 272
A + L+L MR + + F+++ LSA L G+ H +++GF
Sbjct: 523 NAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHD 582
Query: 273 LHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIK 332
+ NA MYSKCG I + + + V R + +WN +I+ +HG +E + F EM++
Sbjct: 583 SFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLE 642
Query: 333 QGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMV-EHGVQPKLDHYSCIVDLLGRAGLIR 391
G+ P VT++SLL++C HGGLV +G Y++ + + G++P ++H C++DLLGR+G +
Sbjct: 643 MGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLA 702
Query: 392 EARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYA 451
EA FI MP+ PN ++W SLL+S ++HGN+ G +AAE+ LEP + +N++A
Sbjct: 703 EAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFA 762
Query: 452 SVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSL 509
+ G W V VRK M K +K SW+++K KV F D+++ + +I ++ +
Sbjct: 763 TTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDI 820
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 161/318 (50%), Gaps = 6/318 (1%)
Query: 106 NSVINHVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAIT 165
NS++ ++ +L + S++ V+ + A+++C + G H L +
Sbjct: 314 NSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVV 373
Query: 166 TGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLEL 225
+G N +G++L+S+Y + ++ RV +MP R+VV+W A+I G+A++ D L
Sbjct: 374 SGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAA 433
Query: 226 FHLMRGSEMKPNYFTYTSLLSACMGSGA-LGYGRGAHCQIIQMGFHSYLHVDNALIAMYS 284
F MR + NY T S+LSAC+ G L G+ H I+ GF S HV N+LI MY+
Sbjct: 434 FQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYA 493
Query: 285 KCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLS 344
KCG + + +F + R+++TWN+M+A A HG +E + L +M GV D ++
Sbjct: 494 KCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSE 553
Query: 345 LLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCP 404
LS+ +++EGQ V+ G + ++ D+ + G I E ++ +P
Sbjct: 554 GLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEV---VKMLPPSV 610
Query: 405 NAVI--WGSLLSSSRLHG 420
N + W L+S+ HG
Sbjct: 611 NRSLPSWNILISALGRHG 628
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 149/277 (53%), Gaps = 10/277 (3%)
Query: 144 VSSCG-SKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERN 202
V++CG S GVQ H +G +++VYV ++++ LY L + +VFEEMP+RN
Sbjct: 48 VTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRN 107
Query: 203 VVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHC 262
VVSWT+++ G++ + + ++++ MRG + N + + ++S+C GR
Sbjct: 108 VVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIG 167
Query: 263 QIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQE 322
Q+++ G S L V+N+LI+M G +D A YIF+ M RD ++WNS+ A YAQ+G +E
Sbjct: 168 QVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEE 227
Query: 323 AISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVD 382
+ +F M + + ++ T +LLS H K G+ +V+ G D C+ +
Sbjct: 228 SFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMG----FDSVVCVCN 283
Query: 383 LLGR----AGLIREARDFIENMPVCPNAVIWGSLLSS 415
L R AG EA + MP + + W SL++S
Sbjct: 284 TLLRMYAGAGRSVEANLVFKQMPT-KDLISWNSLMAS 319
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 143/274 (52%), Gaps = 1/274 (0%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP 199
+S +SSCG +D + G Q + +G + + V +SLIS+ A +F++M
Sbjct: 146 MSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMS 205
Query: 200 ERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRG 259
ER+ +SW +I A +AQ ++ +F LMR + N T ++LLS +GRG
Sbjct: 206 ERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRG 265
Query: 260 AHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGL 319
H +++MGF S + V N L+ MY+ G +A +F+ M +D+++WNS++A + G
Sbjct: 266 IHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGR 325
Query: 320 AQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSC 379
+ +A+ L MI G + VT+ S L++C ++G++ +V G+ +
Sbjct: 326 SLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNA 385
Query: 380 IVDLLGRAGLIREARDFIENMPVCPNAVIWGSLL 413
+V + G+ G + E+R + MP + V W +L+
Sbjct: 386 LVSMYGKIGEMSESRRVLLQMPR-RDVVAWNALI 418
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 139/267 (52%), Gaps = 2/267 (0%)
Query: 156 GVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQ 215
G H L + GF + V V ++L+ +Y+ S +A VF++MP ++++SW +++A F
Sbjct: 263 GRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVN 322
Query: 216 EWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHV 275
+ R L L M S NY T+TS L+AC GR H ++ G +
Sbjct: 323 DGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQII 382
Query: 276 DNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGV 335
NAL++MY K G + ++ + M RDVV WN++I GYA+ +A++ F+ M +GV
Sbjct: 383 GNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGV 442
Query: 336 DPDAVTYLSLLSSC-RHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREAR 394
+ +T +S+LS+C G L++ G+ +V G + + ++ + + G + ++
Sbjct: 443 SSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQ 502
Query: 395 DFIENMPVCPNAVIWGSLLSSSRLHGN 421
D + N + W ++L+++ HG+
Sbjct: 503 DLFNGLD-NRNIITWNAMLAANAHHGH 528
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 120/229 (52%), Gaps = 8/229 (3%)
Query: 198 MPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGAL-GY 256
MP RN VSW +++G + +E F M +KP+ F SL++AC SG++
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 257 GRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQ 316
G H + + G S ++V A++ +Y G++ + +FE M R+VV+W S++ GY+
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 317 HGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKE---GQVYFNSMVEHGVQPK 373
G +E I +++ M +GV + + ++SSC GL+K+ G+ +V+ G++ K
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDESLGRQIIGQVVKSGLESK 177
Query: 374 LDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNV 422
L + ++ +LG G + A + M + + W S+ ++ +G++
Sbjct: 178 LAVENSLISMLGSMGNVDYANYIFDQMSE-RDTISWNSIAAAYAQNGHI 225
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 99/236 (41%), Gaps = 5/236 (2%)
Query: 111 HVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIA 170
H G LK ++M S + +D S +S+ L G Q H LA+ GF
Sbjct: 525 HHGHGEEVLKLVSKMRSF---GVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEH 581
Query: 171 NVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMR 230
+ ++ ++ +YS+C G+ ++ R++ SW +I+ + + FH M
Sbjct: 582 DSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEML 641
Query: 231 GSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQ-MGFHSYLHVDNALIAMYSKCGVI 289
+KP + T+ SLL+AC G + G + I + G + +I + + G +
Sbjct: 642 EMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRL 701
Query: 290 DDALYIFENMVGR-DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLS 344
+A M + + + W S++A HG E + K + D+V LS
Sbjct: 702 AEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLS 757
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 118/358 (32%), Positives = 204/358 (56%), Gaps = 1/358 (0%)
Query: 153 LNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAG 212
L G H ++ GF ++ +V +SLI++Y++C + +F + RN+++W A++A
Sbjct: 480 LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAA 539
Query: 213 FAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSY 272
A + L+L MR + + F+++ LSA L G+ H +++GF
Sbjct: 540 NAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHD 599
Query: 273 LHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIK 332
+ NA MYSKCG I + + + V R + +WN +I+ +HG +E + F EM++
Sbjct: 600 SFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLE 659
Query: 333 QGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMV-EHGVQPKLDHYSCIVDLLGRAGLIR 391
G+ P VT++SLL++C HGGLV +G Y++ + + G++P ++H C++DLLGR+G +
Sbjct: 660 MGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLA 719
Query: 392 EARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYA 451
EA FI MP+ PN ++W SLL+S ++HGN+ G +AAE+ LEP + +N++A
Sbjct: 720 EAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFA 779
Query: 452 SVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSL 509
+ G W V VRK M K +K SW+++K KV F D+++ + +I ++ +
Sbjct: 780 TTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDI 837
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 161/318 (50%), Gaps = 6/318 (1%)
Query: 106 NSVINHVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAIT 165
NS++ ++ +L + S++ V+ + A+++C + G H L +
Sbjct: 331 NSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVV 390
Query: 166 TGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLEL 225
+G N +G++L+S+Y + ++ RV +MP R+VV+W A+I G+A++ D L
Sbjct: 391 SGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAA 450
Query: 226 FHLMRGSEMKPNYFTYTSLLSACMGSGA-LGYGRGAHCQIIQMGFHSYLHVDNALIAMYS 284
F MR + NY T S+LSAC+ G L G+ H I+ GF S HV N+LI MY+
Sbjct: 451 FQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYA 510
Query: 285 KCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLS 344
KCG + + +F + R+++TWN+M+A A HG +E + L +M GV D ++
Sbjct: 511 KCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSE 570
Query: 345 LLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCP 404
LS+ +++EGQ V+ G + ++ D+ + G I E ++ +P
Sbjct: 571 GLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEV---VKMLPPSV 627
Query: 405 NAVI--WGSLLSSSRLHG 420
N + W L+S+ HG
Sbjct: 628 NRSLPSWNILISALGRHG 645
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 149/277 (53%), Gaps = 10/277 (3%)
Query: 144 VSSCG-SKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERN 202
V++CG S GVQ H +G +++VYV ++++ LY L + +VFEEMP+RN
Sbjct: 65 VTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRN 124
Query: 203 VVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHC 262
VVSWT+++ G++ + + ++++ MRG + N + + ++S+C GR
Sbjct: 125 VVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIG 184
Query: 263 QIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQE 322
Q+++ G S L V+N+LI+M G +D A YIF+ M RD ++WNS+ A YAQ+G +E
Sbjct: 185 QVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEE 244
Query: 323 AISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVD 382
+ +F M + + ++ T +LLS H K G+ +V+ G D C+ +
Sbjct: 245 SFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMG----FDSVVCVCN 300
Query: 383 LLGR----AGLIREARDFIENMPVCPNAVIWGSLLSS 415
L R AG EA + MP + + W SL++S
Sbjct: 301 TLLRMYAGAGRSVEANLVFKQMPT-KDLISWNSLMAS 336
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 143/274 (52%), Gaps = 1/274 (0%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP 199
+S +SSCG +D + G Q + +G + + V +SLIS+ A +F++M
Sbjct: 163 MSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMS 222
Query: 200 ERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRG 259
ER+ +SW +I A +AQ ++ +F LMR + N T ++LLS +GRG
Sbjct: 223 ERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRG 282
Query: 260 AHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGL 319
H +++MGF S + V N L+ MY+ G +A +F+ M +D+++WNS++A + G
Sbjct: 283 IHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGR 342
Query: 320 AQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSC 379
+ +A+ L MI G + VT+ S L++C ++G++ +V G+ +
Sbjct: 343 SLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNA 402
Query: 380 IVDLLGRAGLIREARDFIENMPVCPNAVIWGSLL 413
+V + G+ G + E+R + MP + V W +L+
Sbjct: 403 LVSMYGKIGEMSESRRVLLQMPR-RDVVAWNALI 435
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 139/267 (52%), Gaps = 2/267 (0%)
Query: 156 GVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQ 215
G H L + GF + V V ++L+ +Y+ S +A VF++MP ++++SW +++A F
Sbjct: 280 GRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVN 339
Query: 216 EWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHV 275
+ R L L M S NY T+TS L+AC GR H ++ G +
Sbjct: 340 DGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQII 399
Query: 276 DNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGV 335
NAL++MY K G + ++ + M RDVV WN++I GYA+ +A++ F+ M +GV
Sbjct: 400 GNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGV 459
Query: 336 DPDAVTYLSLLSSC-RHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREAR 394
+ +T +S+LS+C G L++ G+ +V G + + ++ + + G + ++
Sbjct: 460 SSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQ 519
Query: 395 DFIENMPVCPNAVIWGSLLSSSRLHGN 421
D + N + W ++L+++ HG+
Sbjct: 520 DLFNGLD-NRNIITWNAMLAANAHHGH 545
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 128/246 (52%), Gaps = 8/246 (3%)
Query: 181 LYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFT 240
+Y++ A +F+ MP RN VSW +++G + +E F M +KP+ F
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 241 YTSLLSACMGSGAL-GYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM 299
SL++AC SG++ G H + + G S ++V A++ +Y G++ + +FE M
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 300 VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKE-- 357
R+VV+W S++ GY+ G +E I +++ M +GV + + ++SSC GL+K+
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDES 177
Query: 358 -GQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSS 416
G+ +V+ G++ KL + ++ +LG G + A + M + + W S+ ++
Sbjct: 178 LGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSE-RDTISWNSIAAAY 236
Query: 417 RLHGNV 422
+G++
Sbjct: 237 AQNGHI 242
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 99/236 (41%), Gaps = 5/236 (2%)
Query: 111 HVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIA 170
H G LK ++M S + +D S +S+ L G Q H LA+ GF
Sbjct: 542 HHGHGEEVLKLVSKMRSF---GVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEH 598
Query: 171 NVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMR 230
+ ++ ++ +YS+C G+ ++ R++ SW +I+ + + FH M
Sbjct: 599 DSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEML 658
Query: 231 GSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQ-MGFHSYLHVDNALIAMYSKCGVI 289
+KP + T+ SLL+AC G + G + I + G + +I + + G +
Sbjct: 659 EMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRL 718
Query: 290 DDALYIFENM-VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLS 344
+A M + + + W S++A HG E + K + D+V LS
Sbjct: 719 AEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLS 774
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 121/339 (35%), Positives = 194/339 (57%), Gaps = 3/339 (0%)
Query: 171 NVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELF-HLM 229
N+ +S++ Y++ A VF+EM ER+VV+W+++I G+ + + LE+F +M
Sbjct: 173 NLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMM 232
Query: 230 RGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVI 289
R K N T S++ AC GAL G+ H I+ + + + +LI MY+KCG I
Sbjct: 233 RMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSI 292
Query: 290 DDALYIF--ENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLS 347
DA +F ++ D + WN++I G A HG +E++ LF +M + +DPD +T+L LL+
Sbjct: 293 GDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLA 352
Query: 348 SCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAV 407
+C HGGLVKE +F S+ E G +PK +HY+C+VD+L RAGL+++A DFI MP+ P
Sbjct: 353 ACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGS 412
Query: 408 IWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMK 467
+ G+LL+ HGN+ + + + L+P LAN+YA + +R+ M+
Sbjct: 413 MLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAME 472
Query: 468 DKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVI 506
KG+K G S +++ HRF A DK++ I V+
Sbjct: 473 KKGVKKIAGHSILDLDGTRHRFIAHDKTHFHSDKIYAVL 511
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 129/299 (43%), Gaps = 37/299 (12%)
Query: 158 QYHCLAITTGFIANVYVGSSLISLYSRCALSGD---AYRVFEEMPERNVVSWTAIIAGFA 214
+ H L IT G S +S +S + SGD AY+ ++ + W +I GF+
Sbjct: 26 KIHTLLITLGLSEEEPFVSQTLS-FSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFS 84
Query: 215 QEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLH 274
+ + ++ M + P++ TY L+ + G HC +++ G L
Sbjct: 85 NSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLF 144
Query: 275 VDNALIAMY-------------------------------SKCGVIDDALYIFENMVGRD 303
+ N LI MY +K G + A +F+ M RD
Sbjct: 145 ICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERD 204
Query: 304 VVTWNSMIAGYAQHGLAQEAISLFEEMIKQG-VDPDAVTYLSLLSSCRHGGLVKEGQVYF 362
VVTW+SMI GY + G +A+ +F++M++ G + VT +S++ +C H G + G+
Sbjct: 205 VVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVH 264
Query: 363 NSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVC-PNAVIWGSLLSSSRLHG 420
+++ + + + ++D+ + G I +A V +A++W +++ HG
Sbjct: 265 RYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHG 323
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 89/192 (46%), Gaps = 3/192 (1%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVF--EEMPER 201
+ +C LN G H + V + +SLI +Y++C GDA+ VF + E
Sbjct: 248 ICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKET 307
Query: 202 NVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAH 261
+ + W AII G A + L+LFH MR S++ P+ T+ LL+AC G +
Sbjct: 308 DALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFF 367
Query: 262 CQIIQMGFHSYLHVDNALIAMYSKCGVIDDAL-YIFENMVGRDVVTWNSMIAGYAQHGLA 320
+ + G ++ + S+ G++ DA +I E + +++ G HG
Sbjct: 368 KSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNL 427
Query: 321 QEAISLFEEMIK 332
+ A ++ +++I+
Sbjct: 428 ELAETVGKKLIE 439
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 229 bits (584), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 141/410 (34%), Positives = 217/410 (52%), Gaps = 38/410 (9%)
Query: 130 EQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSG 189
E L D + +S+C + ++L G + + +T F +V +G++L+ ++ +C
Sbjct: 141 ESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE-FEMSVRIGNALVDMFCKCGCLD 199
Query: 190 DAYRVFEEM-------------------------------PERNVVSWTAIIAGFAQEWR 218
A VF+ M P ++VV WTA++ G+ Q R
Sbjct: 200 KARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNR 259
Query: 219 VDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNA 278
D LELF M+ + ++P+ F SLL+ C +GAL G+ H I + V A
Sbjct: 260 FDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTA 319
Query: 279 LIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPD 338
L+ MY+KCG I+ AL +F + RD +W S+I G A +G++ A+ L+ EM GV D
Sbjct: 320 LVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLD 379
Query: 339 AVTYLSLLSSCRHGGLVKEGQVYFNSMVE-HGVQPKLDHYSCIVDLLGRAGLIREARDFI 397
A+T++++L++C HGG V EG+ F+SM E H VQPK +H SC++DLL RAGL+ EA + I
Sbjct: 380 AITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELI 439
Query: 398 ENMPVCPNAV---IWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVG 454
+ M + ++ SLLS++R +GNV I AE +E S+ LA++YAS
Sbjct: 440 DKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASAN 499
Query: 455 WWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDK--SNRRMSDI 502
W V VR+ MKD G++ PG S IE+ H F D S+ +M +I
Sbjct: 500 RWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEI 549
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 152/350 (43%), Gaps = 34/350 (9%)
Query: 103 MLENSVINHVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCL 162
++ N ++ + + K + Q L D L + S G R + G + H
Sbjct: 12 LMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGY 71
Query: 163 AITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMC 222
A+ G + YV +SL+ +Y+ ++VF+EMP+R+VVSW +I+ + R +
Sbjct: 72 AVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDA 131
Query: 223 LELFHLM-RGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIA 281
+ +F M + S +K + T S LSAC L G + + + F + + NAL+
Sbjct: 132 IGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIY-RFVVTEFEMSVRIGNALVD 190
Query: 282 MYSKCGVIDDALYIFENM-----------------VGR--------------DVVTWNSM 310
M+ KCG +D A +F++M GR DVV W +M
Sbjct: 191 MFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAM 250
Query: 311 IAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGV 370
+ GY Q EA+ LF M G+ PD +SLL+ C G +++G+ + E+ V
Sbjct: 251 MNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRV 310
Query: 371 QPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHG 420
+ +VD+ + G I A + + A W SL+ ++G
Sbjct: 311 TVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTAS-WTSLIYGLAMNG 359
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 124/257 (48%), Gaps = 14/257 (5%)
Query: 223 LELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAM 282
L LF +RG + P+ FT +L + + G H ++ G +V N+L+ M
Sbjct: 31 LALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGM 90
Query: 283 YSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQG-VDPDAVT 341
Y+ G I+ +F+ M RDVV+WN +I+ Y +G ++AI +F+ M ++ + D T
Sbjct: 91 YASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGT 150
Query: 342 YLSLLSSCRHGGLVKEGQ-VYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENM 400
+S LS+C ++ G+ +Y + E + ++ + +VD+ + G + +AR ++M
Sbjct: 151 IVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGN--ALVDMFCKCGCLDKARAVFDSM 208
Query: 401 PVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLE--PGCSATL-QQLANLYASVGWWN 457
N W S+ + G V G E+R+L E P L + N Y ++
Sbjct: 209 RD-KNVKCWTSM-----VFGYVSTG-RIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFD 261
Query: 458 QVARVRKLMKDKGLKPN 474
+ + + M+ G++P+
Sbjct: 262 EALELFRCMQTAGIRPD 278
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 136/400 (34%), Positives = 211/400 (52%), Gaps = 5/400 (1%)
Query: 111 HVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIA 170
G +L ++ EM + + G D + + + G D G H TG
Sbjct: 194 QAGKSLKAVEFYREMQN---EGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPM 250
Query: 171 NVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMR 230
NV V +SL+ +Y++ A RVF M + VSW ++I+GFAQ + E M+
Sbjct: 251 NVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQ 310
Query: 231 GSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVID 290
+P+ T +L AC G+L GR HC I++ + AL+ MYSKCG +
Sbjct: 311 SLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRV-TATALMDMYSKCGALS 369
Query: 291 DALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCR 350
+ IFE++ +D+V WN+MI+ Y HG QE +SLF +M + ++PD T+ SLLS+
Sbjct: 370 SSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALS 429
Query: 351 HGGLVKEGQVYFNSMV-EHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIW 409
H GLV++GQ +F+ M+ ++ +QP HY C++DLL RAG + EA D I + + IW
Sbjct: 430 HSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIW 489
Query: 410 GSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDK 469
+LLS H N+ +G AA L L P ++N +A+ W +VA+VRKLM++
Sbjct: 490 VALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNG 549
Query: 470 GLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSL 509
++ PG S IEV ++ F +D S+ +L V+ +L
Sbjct: 550 AMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLRNL 589
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 152/294 (51%), Gaps = 2/294 (0%)
Query: 128 VMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCAL 187
++ +++ D + + +C S L G C A+ G+ +V+V SS+++LY +C
Sbjct: 107 MIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGK 166
Query: 188 SGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSA 247
+A +F +M +R+V+ WT ++ GFAQ + +E + M+ + LL A
Sbjct: 167 MDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQA 226
Query: 248 CMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTW 307
G GR H + + G + V+ +L+ MY+K G I+ A +F M+ + V+W
Sbjct: 227 SGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSW 286
Query: 308 NSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE 367
S+I+G+AQ+GLA +A EM G PD VT + +L +C G +K G++ +++
Sbjct: 287 GSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILK 346
Query: 368 HGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGN 421
V ++ + ++D+ + G + +R+ E++ + V W +++S +HGN
Sbjct: 347 RHVLDRVT-ATALMDMYSKCGALSSSREIFEHVGR-KDLVCWNTMISCYGIHGN 398
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 133/261 (50%), Gaps = 8/261 (3%)
Query: 158 QYHCLAITTGFIANVYVGSSLI-SLYSRCALSGD---AYRVFEEMPERNVVSWTAIIAGF 213
Q H I+TG + N GSS+ L + C G+ A +VF+E+P+R V + ++I +
Sbjct: 35 QIHAFVISTGNLLN---GSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVY 91
Query: 214 AQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYL 273
++ D L L+ M +++P+ T+T + AC+ L G C+ + G+ + +
Sbjct: 92 SRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDV 151
Query: 274 HVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQ 333
V ++++ +Y KCG +D+A +F M RDV+ W +M+ G+AQ G + +A+ + EM +
Sbjct: 152 FVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNE 211
Query: 334 GVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREA 393
G D V L LL + G K G+ + G+ + + +VD+ + G I A
Sbjct: 212 GFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVA 271
Query: 394 RDFIENMPVCPNAVIWGSLLS 414
M + AV WGSL+S
Sbjct: 272 SRVFSRM-MFKTAVSWGSLIS 291
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 125/395 (31%), Positives = 211/395 (53%), Gaps = 9/395 (2%)
Query: 126 SSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRC 185
S + E+ +GV ++ +S+ D++ G H LA+ TG +++ V ++LI +Y +
Sbjct: 251 SKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKS 310
Query: 186 ALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLL 245
+A +FE M ER++ +W +++ D L LF M S ++P+ T T++L
Sbjct: 311 KWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVL 370
Query: 246 SACMGSGALGYGRGAHCQIIQMGF------HSYLHVDNALIAMYSKCGVIDDALYIFENM 299
C +L GR H +I G + ++H N+L+ MY KCG + DA +F++M
Sbjct: 371 PTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIH--NSLMDMYVKCGDLRDARMVFDSM 428
Query: 300 VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQ 359
+D +WN MI GY + A+ +F M + GV PD +T++ LL +C H G + EG+
Sbjct: 429 RVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGR 488
Query: 360 VYFNSM-VEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRL 418
+ M + + P DHY+C++D+LGRA + EA + + P+C N V+W S+LSS RL
Sbjct: 489 NFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRL 548
Query: 419 HGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSS 478
HGN + + A + LEP ++N+Y G + +V VR M+ + +K PG S
Sbjct: 549 HGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCS 608
Query: 479 WIEVKSKVHRFEAQDKSNRRMSDILLVIDSLVDHM 513
WI +K+ VH F ++++ I + ++ HM
Sbjct: 609 WIVLKNGVHTFFTGNQTHPEFKSIHDWLSLVISHM 643
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 141/254 (55%), Gaps = 5/254 (1%)
Query: 158 QYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPER-NVVSWTAIIAGFAQE 216
+ H LA GF ++ YVGS L++ YS+ DA +VF+E+P+R + V W A++ G++Q
Sbjct: 181 KVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQI 240
Query: 217 WRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVD 276
+R + L +F MR + + T TS+LSA SG + GR H ++ G S + V
Sbjct: 241 FRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVS 300
Query: 277 NALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVD 336
NALI MY K +++A IFE M RD+ TWNS++ + G ++LFE M+ G+
Sbjct: 301 NALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIR 360
Query: 337 PDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDH----YSCIVDLLGRAGLIRE 392
PD VT ++L +C +++G+ M+ G+ + ++ ++D+ + G +R+
Sbjct: 361 PDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRD 420
Query: 393 ARDFIENMPVCPNA 406
AR ++M V +A
Sbjct: 421 ARMVFDSMRVKDSA 434
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 154/322 (47%), Gaps = 14/322 (4%)
Query: 147 CGSKRDLNGGVQYHCLAITTGFIANV-YVGSSLISLYSRCALSGDAYRVFEEMPERNVVS 205
C ++D G Q H + GF+ + G+SL+++Y++C L A VF ER+V
Sbjct: 70 CAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SERDVFG 128
Query: 206 WTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYG--RGAHCQ 263
+ A+I+GF +E + MR + + P+ +T+ SLL GS A+ + H
Sbjct: 129 YNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLK---GSDAMELSDVKKVHGL 185
Query: 264 IIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGR-DVVTWNSMIAGYAQHGLAQE 322
++GF S +V + L+ YSK ++DA +F+ + R D V WN+++ GY+Q ++
Sbjct: 186 AFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFED 245
Query: 323 AISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVD 382
A+ +F +M ++GV T S+LS+ G + G+ V+ G + + ++D
Sbjct: 246 ALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALID 305
Query: 383 LLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSAT 442
+ G++ + EA E M + W S+L G+ G A R+L CS
Sbjct: 306 MYGKSKWLEEANSIFEAMDE-RDLFTWNSVLCVHDYCGD-HDGTLALFERML----CSGI 359
Query: 443 LQQLANLYASVGWWNQVARVRK 464
+ L + ++A +R+
Sbjct: 360 RPDIVTLTTVLPTCGRLASLRQ 381
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 86/185 (46%), Gaps = 15/185 (8%)
Query: 237 NYFTYTSLLSACMGSGALGYGRGAHCQIIQMGF-HSYLHVDNALIAMYSKCGVIDDALYI 295
N T + L C G+ H +++ GF +L+ MY+KCG++ A+ +
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 296 FENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLV 355
F RDV +N++I+G+ +G +A+ + EM G+ PD T+ SLL L
Sbjct: 119 FGGS-ERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELS 177
Query: 356 KEGQVYFNSMVEHGVQPKL----DHY--SCIVDLLGRAGLIREARDFIENMPVCPNAVIW 409
+V HG+ KL D Y S +V + + +A+ + +P ++V+W
Sbjct: 178 DVKKV-------HGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLW 230
Query: 410 GSLLS 414
+L++
Sbjct: 231 NALVN 235
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 115/309 (37%), Positives = 178/309 (57%), Gaps = 1/309 (0%)
Query: 173 YVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGS 232
+V ++L+ Y+ C +A +FE + E ++ +W ++A +A +D E+ L
Sbjct: 151 FVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRM 210
Query: 233 EMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDA 292
+++PN + +L+ +C G G AH +++ V +LI +YSKCG + A
Sbjct: 211 QVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFA 270
Query: 293 LYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHG 352
+F+ M RDV +N+MI G A HG QE I L++ +I QG+ PD+ T++ +S+C H
Sbjct: 271 RKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHS 330
Query: 353 GLVKEGQVYFNSM-VEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGS 411
GLV EG FNSM +G++PK++HY C+VDLLGR+G + EA + I+ MPV PNA +W S
Sbjct: 331 GLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRS 390
Query: 412 LLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGL 471
L SS+ HG+ G A + L LE S L+N+YA V W V + R+LMKD +
Sbjct: 391 FLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRV 450
Query: 472 KPNPGSSWI 480
+PG S +
Sbjct: 451 NKSPGISTL 459
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 137/306 (44%), Gaps = 32/306 (10%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV 203
+S C S ++L Q H IT G + Y S L+ L S LS A + ++P +V
Sbjct: 16 ISKCKSLQNLK---QIHAQIITIGLSHHTYPLSKLLHLSSTVCLSY-ALSILRQIPNPSV 71
Query: 204 VSWTAIIAGFA---QEWRVDMCLELFHLM---RGSEMKPNYFTYTSLLSACMGSGAL--G 255
+ +I+ + + L+ + R + ++PN FTY SL A G A
Sbjct: 72 FLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKAS-GFDAQWHR 130
Query: 256 YGRGAHCQIIQM--GFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAG 313
+GR H +++ + V AL+ Y+ CG + +A +FE + D+ TWN+++A
Sbjct: 131 HGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAA 190
Query: 314 YAQHGLAQEAISLFEEMI----KQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHG 369
YA E I EE++ + V P+ ++ ++L+ SC + G G ++++
Sbjct: 191 YAN----SEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNN 246
Query: 370 VQPKLDHYSCIVDLLGRAGLIREARDFIENMP----VCPNAVIWGSLLSSSRLHGNVWIG 425
+ + ++DL + G + AR + M C NA+I G +HG G
Sbjct: 247 LTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRG-----LAVHGFGQEG 301
Query: 426 IEAAES 431
IE +S
Sbjct: 302 IELYKS 307
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 96/224 (42%), Gaps = 35/224 (15%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV 203
+ SC + + GV H + N +VG+SLI LYS+C A +VF+EM +R+V
Sbjct: 223 IKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDV 282
Query: 204 VSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQ 263
+ A+I G A +EL+ + + P+ T+ +SAC SG + G
Sbjct: 283 SCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEG------ 336
Query: 264 IIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEA 323
L + N++ A+Y + V + ++ + G +EA
Sbjct: 337 ---------LQIFNSMKAVYG---------------IEPKVEHYGCLVDLLGRSGRLEEA 372
Query: 324 ISLFEEMIKQ-GVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMV 366
EE IK+ V P+A + S L S + G + G++ ++
Sbjct: 373 ----EECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLL 412
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 127/360 (35%), Positives = 197/360 (54%), Gaps = 1/360 (0%)
Query: 136 DVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVF 195
D+ + A+ SC + + ++ H I +GF+ + V +SL+ YS A +VF
Sbjct: 106 DLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVF 165
Query: 196 EEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALG 255
+EMP R++VSW +I F+ + L ++ M + + +T +LLS+C AL
Sbjct: 166 DEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALN 225
Query: 256 YGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYA 315
G H + S + V NALI MY+KCG +++A+ +F M RDV+TWNSMI GY
Sbjct: 226 MGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYG 285
Query: 316 QHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSM-VEHGVQPKL 374
HG EAIS F +M+ GV P+A+T+L LL C H GLVKEG +F M + + P +
Sbjct: 286 VHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNV 345
Query: 375 DHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLL 434
HY C+VDL GRAG + + + I + V+W +LL S ++H N+ +G A + +
Sbjct: 346 KHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQ 405
Query: 435 LEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDK 494
LE + + ++Y++ A +RKL++ L+ PG SWIE+ +VH+F DK
Sbjct: 406 LEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDK 465
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 225 bits (574), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 129/391 (32%), Positives = 214/391 (54%), Gaps = 11/391 (2%)
Query: 106 NSVINHVGSNLATLKTTTEMSSVMEQE-LGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAI 164
NS+I+ S K ++ ME+E D L + +C DL G +AI
Sbjct: 202 NSMISGY-SEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAI 260
Query: 165 TTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLE 224
T + ++GS LIS+Y +C A RVF +M +++ V+WTA+I ++Q + +
Sbjct: 261 TKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFK 320
Query: 225 LFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYS 284
LF M + + P+ T +++LSAC GAL G+ ++ ++V L+ MY
Sbjct: 321 LFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYG 380
Query: 285 KCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLS 344
KCG +++AL +FE M ++ TWN+MI YA G A+EA+ LF+ M V P +T++
Sbjct: 381 KCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIG 437
Query: 345 LLSSCRHGGLVKEGQVYFNSMVE-HGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVC 403
+LS+C H GLV +G YF+ M G+ PK++HY+ I+DLL RAG++ EA +F+E P
Sbjct: 438 VLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGK 497
Query: 404 PNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQL---ANLYASVGWWNQVA 460
P+ ++ ++L + H + I R+L+E + +N+ A + W++ A
Sbjct: 498 PDEIMLAAILGAC--HKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESA 555
Query: 461 RVRKLMKDKGLKPNPGSSWIEVKSKVHRFEA 491
++R LM+D+G+ PG SWIE++ ++ F A
Sbjct: 556 KMRALMRDRGVVKTPGCSWIEIEGELMEFLA 586
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 153/293 (52%), Gaps = 11/293 (3%)
Query: 146 SCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVS 205
+C ++ G H G +V++ SLI +Y++C G A ++F+E+ ER+ VS
Sbjct: 141 ACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVS 200
Query: 206 WTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQII 265
W ++I+G+++ ++LF M +P+ T S+L AC G L GR I
Sbjct: 201 WNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAI 260
Query: 266 --QMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEA 323
++G ++L + LI+MY KCG +D A +F M+ +D V W +MI Y+Q+G + EA
Sbjct: 261 TKKIGLSTFL--GSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEA 318
Query: 324 ISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDL 383
LF EM K GV PDA T ++LS+C G ++ G+ E +Q + + +VD+
Sbjct: 319 FKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDM 378
Query: 384 LGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLE 436
G+ G + EA E MPV N W +++++ G+ A E+ LL +
Sbjct: 379 YGKCGRVEEALRVFEAMPV-KNEATWNAMITAYAHQGH------AKEALLLFD 424
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 121/222 (54%), Gaps = 2/222 (0%)
Query: 194 VFEEMPERNVVSWTAIIAGFAQEWRV-DMCLELFHLMRGSEMKPNYFTYTSLLSACMGSG 252
+F E N S+ +I G W + L L+ M+ S +KP+ FTY + AC
Sbjct: 87 LFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLE 146
Query: 253 ALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIA 312
+G GR H + ++G +H++++LI MY+KCG + A +F+ + RD V+WNSMI+
Sbjct: 147 EIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMIS 206
Query: 313 GYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQP 372
GY++ G A++A+ LF +M ++G +PD T +S+L +C H G ++ G++ + +
Sbjct: 207 GYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGL 266
Query: 373 KLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLS 414
S ++ + G+ G + AR M + + V W ++++
Sbjct: 267 STFLGSKLISMYGKCGDLDSARRVFNQM-IKKDRVAWTAMIT 307
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 224 bits (572), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 133/390 (34%), Positives = 212/390 (54%), Gaps = 7/390 (1%)
Query: 130 EQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSG 189
+Q +D ++ +S+ + R+ G Q H I G I + S LI +YS+ L
Sbjct: 412 KQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQG-IQFEGMNSYLIDMYSKSGLIR 470
Query: 190 DAYRVFEE--MPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSA 247
+ ++FE ER+ +W ++I+G+ Q + +F M ++PN T S+L A
Sbjct: 471 ISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPA 530
Query: 248 CMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTW 307
C G++ G+ H I+ + V +AL+ MYSK G I A +F R+ VT+
Sbjct: 531 CSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTY 590
Query: 308 NSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE 367
+MI GY QHG+ + AISLF M + G+ PDA+T++++LS+C + GL+ EG F M E
Sbjct: 591 TTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMRE 650
Query: 368 -HGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPN-AVIWGSLLSSSRLHGNVWIG 425
+ +QP +HY CI D+LGR G + EA +F++ + N A +WGSLL S +LHG + +
Sbjct: 651 VYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELA 710
Query: 426 IEAAESRLLLEPGCSATLQQ--LANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVK 483
+E + G + + + L+N+YA W V +VR+ M++KGLK G S IE+
Sbjct: 711 ETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIA 770
Query: 484 SKVHRFEAQDKSNRRMSDILLVIDSLVDHM 513
V+ F ++D+ + S+I VID L M
Sbjct: 771 GYVNCFVSRDQEHPHSSEIYDVIDGLAKDM 800
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 133/264 (50%), Gaps = 5/264 (1%)
Query: 162 LAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDM 221
L + ++ +++V SS IS+Y+ + RVF+ ERN+ W +I + Q +
Sbjct: 241 LKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVE 300
Query: 222 CLELFHLMRGS-EMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALI 280
+ELF GS E+ + TY SA + GR H + + + + N+L+
Sbjct: 301 SIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLM 360
Query: 281 AMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAV 340
MYS+CG + + +F +M RDVV+WN+MI+ + Q+GL E + L EM KQG D +
Sbjct: 361 VMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYI 420
Query: 341 TYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQ-PKLDHYSCIVDLLGRAGLIREARDFIEN 399
T +LLS+ + + G+ ++ G+Q ++ Y ++D+ ++GLIR ++ E
Sbjct: 421 TVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSY--LIDMYSKSGLIRISQKLFEG 478
Query: 400 MPVCP-NAVIWGSLLSSSRLHGNV 422
+ W S++S +G+
Sbjct: 479 SGYAERDQATWNSMISGYTQNGHT 502
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 114/240 (47%), Gaps = 25/240 (10%)
Query: 191 AYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFH--LMRGSEMKP-------NYFTY 241
A ++F+ +P+ V W II GF +C L H L+ S MK + +TY
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGF-------ICNNLPHEALLFYSRMKKTAPFTNCDAYTY 110
Query: 242 TSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDAL------YI 295
+S L AC + L G+ HC +I+ +S V N+L+ MY C D +
Sbjct: 111 SSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKV 170
Query: 296 FENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLV 355
F+NM ++VV WN++I+ Y + G EA F M++ V P V+++++ + +
Sbjct: 171 FDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSI 230
Query: 356 KEGQVYFNSMVEHGVQPKLDHY--SCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLL 413
K+ V++ M++ G + D + S + + G I +R ++ V N +W +++
Sbjct: 231 KKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSC-VERNIEVWNTMI 289
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 116/251 (46%), Gaps = 13/251 (5%)
Query: 106 NSVINHVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAIT 165
NS+I+ N T KT ++EQ + + ++ + +C ++ G Q H +I
Sbjct: 490 NSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIR 549
Query: 166 TGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLEL 225
NV+V S+L+ +YS+ A +F + ERN V++T +I G+ Q + + L
Sbjct: 550 QYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISL 609
Query: 226 FHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQI-----IQMGFHSYLHVDNALI 280
F M+ S +KP+ T+ ++LSAC SG + G ++ IQ Y + +
Sbjct: 610 FLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITD--- 666
Query: 281 AMYSKCGVIDDALYIFENMVGRD---VVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDP 337
M + G +++A Y F +G + W S++ HG + A ++ E + K
Sbjct: 667 -MLGRVGRVNEA-YEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGK 724
Query: 338 DAVTYLSLLSS 348
+ Y LLS+
Sbjct: 725 NFSGYEVLLSN 735
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 222 bits (566), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 127/382 (33%), Positives = 196/382 (51%), Gaps = 36/382 (9%)
Query: 133 LGVDVCFLSHAVSSCGSK-RDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDA 191
L +D S A+ SC + R + GG H ++ + F++N +VG +L+ +Y +C A
Sbjct: 44 LPLDAHVFSLALKSCAAAFRPVLGG-SVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHA 102
Query: 192 YRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMR----------------GSE-- 233
++F+E+P+RN V W A+I+ + +V +EL+ M G+E
Sbjct: 103 RKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDG 162
Query: 234 ---------------MKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNA 278
KPN T +L+SAC GA + H + + + +
Sbjct: 163 SYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSG 222
Query: 279 LIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPD 338
L+ Y +CG I +F++M RDVV W+S+I+ YA HG A+ A+ F+EM V PD
Sbjct: 223 LVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPD 282
Query: 339 AVTYLSLLSSCRHGGLVKEGQVYFNSMV-EHGVQPKLDHYSCIVDLLGRAGLIREARDFI 397
+ +L++L +C H GL E VYF M ++G++ DHYSC+VD+L R G EA I
Sbjct: 283 DIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVI 342
Query: 398 ENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWN 457
+ MP P A WG+LL + R +G + + AA L++EP A L +Y SVG
Sbjct: 343 QAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQE 402
Query: 458 QVARVRKLMKDKGLKPNPGSSW 479
+ R+R MK+ G+K +PGSSW
Sbjct: 403 EAERLRLKMKESGVKVSPGSSW 424
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 222 bits (565), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 134/376 (35%), Positives = 213/376 (56%), Gaps = 7/376 (1%)
Query: 128 VMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCAL 187
++ Q + D L+ ++S+C + + G Q H I T +++ +V +SLI +YS+
Sbjct: 396 MVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTD-VSDEFVQNSLIDMYSKSGS 454
Query: 188 SGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSA 247
A VF ++ R+VV+W +++ GF+Q + LF M S ++ N T+ +++ A
Sbjct: 455 VDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQA 514
Query: 248 CMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTW 307
C G+L G+ H ++I G L D ALI MY+KCG ++ A +F M R +V+W
Sbjct: 515 CSSIGSLEKGKWVHHKLIISGLKD-LFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSW 573
Query: 308 NSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE 367
+SMI Y HG AIS F +M++ G P+ V ++++LS+C H G V+EG+ YFN M
Sbjct: 574 SSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKS 633
Query: 368 HGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWI--G 425
GV P +H++C +DLL R+G ++EA I+ MP +A +WGSL++ R+H + I
Sbjct: 634 FGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKA 693
Query: 426 IEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSK 485
I+ S ++ + TL L+N+YA G W + R+R MK LK PG S IE+ K
Sbjct: 694 IKNDLSDIVTDDTGYYTL--LSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQK 751
Query: 486 VHRFEAQDKSNRRMSD 501
V RF A ++ NR +D
Sbjct: 752 VFRFGAGEE-NRIQTD 766
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 139/268 (51%), Gaps = 2/268 (0%)
Query: 148 GSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWT 207
GS+ L+ G + H I G + + +SL+ +Y + DA +VF+ MP R++V+W+
Sbjct: 112 GSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWS 171
Query: 208 AIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQM 267
+++ + V L +F M ++P+ T S++ C G L R H QI +
Sbjct: 172 TLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRK 231
Query: 268 GFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLF 327
F + N+L+ MYSKCG + + IFE + ++ V+W +MI+ Y + +++A+ F
Sbjct: 232 MFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSF 291
Query: 328 EEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYS-CIVDLLGR 386
EMIK G++P+ VT S+LSSC GL++EG+ V + P + S +V+L
Sbjct: 292 SEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAE 351
Query: 387 AGLIREARDFIENMPVCPNAVIWGSLLS 414
G + + + + N V W SL+S
Sbjct: 352 CGKLSDCETVLRVVSD-RNIVAWNSLIS 378
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 133/247 (53%), Gaps = 3/247 (1%)
Query: 176 SSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMK 235
+SL+++YS+C + R+FE++ ++N VSWTA+I+ + + + L F M S ++
Sbjct: 241 NSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIE 300
Query: 236 PNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFH-SYLHVDNALIAMYSKCGVIDDALY 294
PN T S+LS+C G + G+ H ++ +Y + AL+ +Y++CG + D
Sbjct: 301 PNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCET 360
Query: 295 IFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGL 354
+ + R++V WNS+I+ YA G+ +A+ LF +M+ Q + PDA T S +S+C + GL
Sbjct: 361 VLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGL 420
Query: 355 VKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLS 414
V G+ ++ V + S ++D+ ++G + A + N + V W S+L
Sbjct: 421 VPLGKQIHGHVIRTDVSDEFVQNS-LIDMYSKSGSVDSAST-VFNQIKHRSVVTWNSMLC 478
Query: 415 SSRLHGN 421
+GN
Sbjct: 479 GFSQNGN 485
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 156/364 (42%), Gaps = 41/364 (11%)
Query: 146 SCGSKRDLNGGVQYHCLAITTGFIA-NVYVGSSLISLYSRCALSGDAYRVFEEMPERNVV 204
SC S R ++ Q H + TG + + + LI Y+ + VFE P +
Sbjct: 10 SCSSLRLVS---QLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSF 66
Query: 205 SWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGA-LGYGRGAHCQ 263
+ +I +D ++L+H + + + F + S+L AC GS L G H +
Sbjct: 67 MYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGR 126
Query: 264 IIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEA 323
II+ G ++ +L+ MY + G + DA +F+ M RD+V W+++++ ++G +A
Sbjct: 127 IIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKA 186
Query: 324 ISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVK-----EGQVYFN--SMVEHGVQPKLDH 376
+ +F+ M+ GV+PDAVT +S++ C G ++ GQ+ + E L
Sbjct: 187 LRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTM 246
Query: 377 YSCIVDLLGRAGLI-------------------------REARDFIENMP--VCPNAVIW 409
YS DLL + + R F E + + PN V
Sbjct: 247 YSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTL 306
Query: 410 GSLLSSSRLHGNVWIG--IEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMK 467
S+LSS L G + G + R L+P + L LYA G + V +++
Sbjct: 307 YSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVS 366
Query: 468 DKGL 471
D+ +
Sbjct: 367 DRNI 370
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 222 bits (565), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 122/346 (35%), Positives = 197/346 (56%), Gaps = 2/346 (0%)
Query: 158 QYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEW 217
+ HC + G + V + + L+ +Y +C G A RVFE + ++VVSWT++I+ A
Sbjct: 508 EIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNG 566
Query: 218 RVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDN 277
+ELF M + + + +LSA AL GR HC +++ GF +
Sbjct: 567 NESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAV 626
Query: 278 ALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDP 337
A++ MY+ CG + A +F+ + + ++ + SMI Y HG + A+ LF++M + V P
Sbjct: 627 AVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSP 686
Query: 338 DAVTYLSLLSSCRHGGLVKEGQVYFNSMV-EHGVQPKLDHYSCIVDLLGRAGLIREARDF 396
D +++L+LL +C H GL+ EG+ + M E+ ++P +HY C+VD+LGRA + EA +F
Sbjct: 687 DHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEF 746
Query: 397 IENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWW 456
++ M P A +W +LL++ R H IG AA+ L LEP L ++N++A G W
Sbjct: 747 VKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRW 806
Query: 457 NQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDI 502
N V +VR MK G++ +PG SWIE+ KVH+F A+DKS+ +I
Sbjct: 807 NDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEI 852
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 143/277 (51%), Gaps = 14/277 (5%)
Query: 170 ANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLM 229
+ +YV ++LI++Y+RC A R+ +M +VV+W ++I G+ Q LE F M
Sbjct: 318 SELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDM 377
Query: 230 RGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVI 289
+ K + + TS+++A L G H +I+ G+ S L V N LI MYSKC +
Sbjct: 378 IAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLT 437
Query: 290 DDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLL--- 346
F M +D+++W ++IAGYAQ+ EA+ LF ++ K+ ++ D + S+L
Sbjct: 438 CYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRAS 497
Query: 347 SSCRHGGLVKEGQVYF--NSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCP 404
S + +VKE + +++ +Q +L VD+ G+ + A E++
Sbjct: 498 SVLKSMLIVKEIHCHILRKGLLDTVIQNEL------VDVYGKCRNMGYATRVFESIK-GK 550
Query: 405 NAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSA 441
+ V W S++SSS L+GN +E R ++E G SA
Sbjct: 551 DVVSWTSMISSSALNGNESEAVELF--RRMVETGLSA 585
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 133/279 (47%), Gaps = 8/279 (2%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITT--GFIANVYVGSSLISLYSRCALSGDAYRVFEE 197
++ + CG +R ++ G Q H T F + G L+ +Y +C DA +VF+E
Sbjct: 83 FAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGK-LVFMYGKCGSLDDAEKVFDE 141
Query: 198 MPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYG 257
MP+R +W +I + L L+ MR + ++ +LL AC + G
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSG 201
Query: 258 RGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGR-DVVTWNSMIAGYAQ 316
H ++++G+HS + NAL++MY+K + A +F+ + D V WNS+++ Y+
Sbjct: 202 SELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYST 261
Query: 317 HGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDH 376
G + E + LF EM G P++ T +S L++C K G+ S+++ +
Sbjct: 262 SGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSS-EL 320
Query: 377 YSC--IVDLLGRAGLIREARDFIENMPVCPNAVIWGSLL 413
Y C ++ + R G + +A + M + V W SL+
Sbjct: 321 YVCNALIAMYTRCGKMPQAERILRQMNN-ADVVTWNSLI 358
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 89/200 (44%), Gaps = 3/200 (1%)
Query: 224 ELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYL--HVDNALIA 281
E F + SE + +L C A+ GR H +I + F S+ + L+
Sbjct: 66 EAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKT-FPSFELDFLAGKLVF 124
Query: 282 MYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVT 341
MY KCG +DDA +F+ M R WN+MI Y +G A++L+ M +GV +
Sbjct: 125 MYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSS 184
Query: 342 YLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMP 401
+ +LL +C ++ G + +V+ G + +V + + + AR +
Sbjct: 185 FPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQ 244
Query: 402 VCPNAVIWGSLLSSSRLHGN 421
+AV+W S+LSS G
Sbjct: 245 EKGDAVLWNSILSSYSTSGK 264
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 221 bits (563), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 120/325 (36%), Positives = 184/325 (56%), Gaps = 2/325 (0%)
Query: 191 AYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGS-EMKPNYFTYTSLLSACM 249
A ++F+ MPERN+VSW +I G+ Q + + LF M+ + + P+ T S+L A
Sbjct: 226 ARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAIS 285
Query: 250 GSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNS 309
+GAL G HC + + + V A++ MYSKCG I+ A IF+ M + V +WN+
Sbjct: 286 DTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNA 345
Query: 310 MIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHG 369
MI GYA +G A+ A+ LF M+ + PD +T L+++++C HGGLV+EG+ +F+ M E G
Sbjct: 346 MIHGYALNGNARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHVMREMG 404
Query: 370 VQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAA 429
+ K++HY C+VDLLGRAG ++EA D I NMP PN +I S LS+ + ++
Sbjct: 405 LNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERIL 464
Query: 430 ESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRF 489
+ + LEP L NLYA+ W+ V+ +M+ K G S IE+ V F
Sbjct: 465 KKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEF 524
Query: 490 EAQDKSNRRMSDILLVIDSLVDHMS 514
+ D ++ I LV+ L+ HM+
Sbjct: 525 ISGDTTHPHRRSIHLVLGDLLMHMN 549
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 147/309 (47%), Gaps = 15/309 (4%)
Query: 126 SSVMEQELGVDVCF------LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLI 179
S + ++L + CF + SC + G+Q H GF A++YV + ++
Sbjct: 61 SFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVV 120
Query: 180 SLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYF 239
+Y++ G A F+EMP R+ VSWTA+I+G+ + +D+ +LF M + +
Sbjct: 121 DMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVK---DVV 177
Query: 240 TYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM 299
Y +++ + SG + R ++ H + +I Y ID A +F+ M
Sbjct: 178 IYNAMMDGFVKSGDMTSAR----RLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAM 233
Query: 300 VGRDVVTWNSMIAGYAQHGLAQEAISLFEEM-IKQGVDPDAVTYLSLLSSCRHGGLVKEG 358
R++V+WN+MI GY Q+ QE I LF+EM +DPD VT LS+L + G + G
Sbjct: 234 PERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLG 293
Query: 359 QVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRL 418
+ + + K+ + I+D+ + G I +A+ + MP W +++ L
Sbjct: 294 EWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPE-KQVASWNAMIHGYAL 352
Query: 419 HGNVWIGIE 427
+GN ++
Sbjct: 353 NGNARAALD 361
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 111/249 (44%), Gaps = 16/249 (6%)
Query: 170 ANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWT-AIIAGFAQEWRVDMCLELFHL 228
NV + + + + + G A ++F++ P+R+ + ++I + + + L+
Sbjct: 8 TNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRD 67
Query: 229 MRGSE-MKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCG 287
+R P+ FT+T+L +C S + G H QI + GF + ++V ++ MY+K G
Sbjct: 68 LRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFG 127
Query: 288 VIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLS 347
+ A F+ M R V+W ++I+GY + G A LF++M D V Y +++
Sbjct: 128 KMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHV---KDVVIYNAMMD 184
Query: 348 SCRHGGLVKEGQVYFNSMVEHGV---QPKLDHYSCIVDLLGRAGLIREARDFIENMPVCP 404
G + + F+ M V + Y I D I AR + MP
Sbjct: 185 GFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKD-------IDAARKLFDAMPE-R 236
Query: 405 NAVIWGSLL 413
N V W +++
Sbjct: 237 NLVSWNTMI 245
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 221 bits (563), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 134/386 (34%), Positives = 215/386 (55%), Gaps = 17/386 (4%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPER-N 202
VSS L+G Q H L GF A + + +SL+ YS A +VF+E PE+ N
Sbjct: 73 VSSAQKASSLDGR-QIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQN 131
Query: 203 VVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHC 262
+V WTA+I+ + + +ELF M +++ + T LSAC GA+ G +
Sbjct: 132 IVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYS 191
Query: 263 QIIQMG--FHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLA 320
+ I+ L + N+L+ MY K G + A +F+ + +DV T+ SMI GYA +G A
Sbjct: 192 RSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQA 251
Query: 321 QEAISLFEEM--IKQGVD----PDAVTYLSLLSSCRHGGLVKEGQVYFNSMV-EHGVQPK 373
QE++ LF++M I Q D P+ VT++ +L +C H GLV+EG+ +F SM+ ++ ++P+
Sbjct: 252 QESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPR 311
Query: 374 LDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRL 433
H+ C+VDL R+G +++A +FI MP+ PN VIW +LL + LHGNV +G E
Sbjct: 312 EAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIF 371
Query: 434 LLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQD 493
L+ L+N+YAS G W++ +++R ++ + + PG SWIE+ S ++ F +
Sbjct: 372 ELDRDHVGDYVALSNIYASKGMWDEKSKMRDRVRKRRM---PGKSWIELGSIINEFVSGP 428
Query: 494 KSNRR---MSDILLVIDSLVDHMSSL 516
+N M +I V+ LV M+S
Sbjct: 429 DNNDEQLMMGEISEVLRCLVSCMTSF 454
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 110/300 (36%), Positives = 177/300 (59%), Gaps = 1/300 (0%)
Query: 191 AYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMG 250
A RVF+ M +R+ +W +I + ++ L+LF M+ ++P++ + S+LS C
Sbjct: 284 ARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCAT 343
Query: 251 SGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSM 310
+L YGR H +++ F ++V + L+ MY KCG + A +F+ +D++ WNS+
Sbjct: 344 LASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSI 403
Query: 311 IAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSM-VEHG 369
I+GYA HGL +EA+ +F EM G P+ VT +++L++C + G ++EG F SM +
Sbjct: 404 ISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFC 463
Query: 370 VQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAA 429
V P ++HYSC VD+LGRAG + +A + IE+M + P+A +WG+LL + + H + + AA
Sbjct: 464 VTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAA 523
Query: 430 ESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRF 489
+ EP + T L+++ AS W VA VRK M+ + PG SWIEV KVH F
Sbjct: 524 KKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMF 583
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 155/347 (44%), Gaps = 57/347 (16%)
Query: 169 IANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHL 228
+ +V +++I R +A +F+EM ERNVV+WT +I G+ Q RVD+ +LF +
Sbjct: 169 VKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEV 228
Query: 229 MRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFH----SYLHVDNALIAMYS 284
M + ++TS+L LGY + + F + NA+I +
Sbjct: 229 MP----EKTEVSWTSML--------LGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFG 276
Query: 285 KCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLS 344
+ G I A +F+ M RD TW MI Y + G EA+ LF +M KQGV P + +S
Sbjct: 277 EVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLIS 336
Query: 345 LLSSCR-----------HGGLVK---EGQVYFNSM-----VEHG--VQPKL--DHYS--- 378
+LS C H LV+ + VY S+ V+ G V+ KL D +S
Sbjct: 337 ILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKD 396
Query: 379 -----CIVDLLGRAGLIREARDFIENMP---VCPNAVIWGSLLSSSRLHGNVWIGI---E 427
I+ GL EA MP PN V ++L++ G + G+ E
Sbjct: 397 IIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFE 456
Query: 428 AAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPN 474
+ ES+ + P T++ + +G QV + +L++ +KP+
Sbjct: 457 SMESKFCVTP----TVEHYSCTVDMLGRAGQVDKAMELIESMTIKPD 499
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 117/250 (46%), Gaps = 17/250 (6%)
Query: 171 NVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMR 230
NV + L+S Y + + +A VFE MPERNVVSWTA++ G+ QE V LF M
Sbjct: 78 NVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMP 137
Query: 231 GSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVID 290
+ N ++T + + G + R ++ M + +I + G +D
Sbjct: 138 ----ERNEVSWTVMFGGLIDDGRIDKAR----KLYDMMPVKDVVASTNMIGGLCREGRVD 189
Query: 291 DALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCR 350
+A IF+ M R+VVTW +MI GY Q+ A LFE M ++ V++ S+L
Sbjct: 190 EARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEK----TEVSWTSMLLGYT 245
Query: 351 HGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWG 410
G +++ + +F M ++P + + IV G G I +AR + M NA W
Sbjct: 246 LSGRIEDAEEFFEVM---PMKPVIACNAMIVG-FGEVGEISKARRVFDLMEDRDNAT-WR 300
Query: 411 SLLSSSRLHG 420
++ + G
Sbjct: 301 GMIKAYERKG 310
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 141/305 (46%), Gaps = 32/305 (10%)
Query: 176 SSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMK 235
+S++S Y L +A ++F+EM ERNVVSW +++G+ + + +F LM +
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMP----E 107
Query: 236 PNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYI 295
N ++T+++ M G +G ++ + S+ + LI G ID A +
Sbjct: 108 RNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLI----DDGRIDKARKL 163
Query: 296 FENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLV 355
++ M +DVV +MI G + G EA +F+EM ++ V VT+ ++++ R V
Sbjct: 164 YDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNV----VTWTTMITGYRQNNRV 219
Query: 356 KEGQVYFNSMVEHGVQPKLDHYSCIVDLLGR--AGLIREARDFIENMPVCP----NAVIW 409
+ F M P+ S LLG +G I +A +F E MP+ P NA+I
Sbjct: 220 DVARKLFEVM------PEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIV 273
Query: 410 GSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDK 469
G G V +A L+E +AT + + Y G+ + + M+ +
Sbjct: 274 G--------FGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQ 325
Query: 470 GLKPN 474
G++P+
Sbjct: 326 GVRPS 330
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 105/227 (46%), Gaps = 16/227 (7%)
Query: 131 QELGVDVCF--LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALS 188
Q+ GV F L +S C + L G Q H + F +VYV S L+++Y +C
Sbjct: 323 QKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGEL 382
Query: 189 GDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSAC 248
A VF+ ++++ W +II+G+A + L++FH M S PN T ++L+AC
Sbjct: 383 VKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTAC 442
Query: 249 MGSGALGYGRGAHCQIIQMGFHSYLHVD--NALIAMYSKCGVIDDALYIFENM-VGRDVV 305
+G L G + ++ F V+ + + M + G +D A+ + E+M + D
Sbjct: 443 SYAGKLEEGLEIF-ESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDAT 501
Query: 306 TWNSMIAGYAQHG---LAQ-EAISLFEEMIKQGVDPDAVTYLSLLSS 348
W +++ H LA+ A LFE +PD LLSS
Sbjct: 502 VWGALLGACKTHSRLDLAEVAAKKLFEN------EPDNAGTYVLLSS 542
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 13/143 (9%)
Query: 280 IAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDA 339
I+ S+ G I++A F+++ + + +WNS+++GY +GL +EA LF+EM ++ V
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNV---- 79
Query: 340 VTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIEN 399
V++ L+S ++ E + F M E V ++ +V + G++ EA
Sbjct: 80 VSWNGLVSGYIKNRMIVEARNVFELMPERNVVS----WTAMVKGYMQEGMVGEAESLFWR 135
Query: 400 MPVCPNAVIW----GSLLSSSRL 418
MP N V W G L+ R+
Sbjct: 136 MPE-RNEVSWTVMFGGLIDDGRI 157
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 118/371 (31%), Positives = 201/371 (54%), Gaps = 1/371 (0%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP 199
S + +C + + L G Q H L F ++ ++GS+LI LY+ + D + F
Sbjct: 361 FSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTS 420
Query: 200 ERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRG 259
++++ SWT++I Q +++ +LF + S ++P +T + ++SAC AL G
Sbjct: 421 KQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQ 480
Query: 260 AHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGL 319
I+ G ++ V + I+MY+K G + A +F + DV T+++MI+ AQHG
Sbjct: 481 IQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGS 540
Query: 320 AQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMV-EHGVQPKLDHYS 378
A EA+++FE M G+ P+ +L +L +C HGGLV +G YF M ++ + P H++
Sbjct: 541 ANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFT 600
Query: 379 CIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPG 438
C+VDLLGR G + +A + I + + V W +LLSS R++ + IG AE + LEP
Sbjct: 601 CLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPE 660
Query: 439 CSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRR 498
S + L N+Y G + VR+LM+D+G+K P SWI + ++ H F D S+
Sbjct: 661 ASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPS 720
Query: 499 MSDILLVIDSL 509
I +++++
Sbjct: 721 SQMIYTMLETM 731
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 127/237 (53%), Gaps = 4/237 (1%)
Query: 181 LYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFT 240
+Y +C G A ++F+ MPERN++S+ ++I+G+ Q + +ELF R + +K + FT
Sbjct: 91 MYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFT 150
Query: 241 YTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMV 300
Y L C L G H ++ G + + N LI MYSKCG +D A+ +F+
Sbjct: 151 YAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD 210
Query: 301 GRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSC---RHGGLVKE 357
RD V+WNS+I+GY + G A+E ++L +M + G++ S+L +C + G +++
Sbjct: 211 ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEK 270
Query: 358 GQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLS 414
G + G++ + + ++D+ + G ++EA MP N V + +++S
Sbjct: 271 GMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMP-SKNVVTYNAMIS 326
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 120/238 (50%), Gaps = 8/238 (3%)
Query: 130 EQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSG 189
E L +D + A+ CG + DL+ G H L + G V++ + LI +YS+C
Sbjct: 141 EANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLD 200
Query: 190 DAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSAC- 248
A +F+ ER+ VSW ++I+G+ + + L L M + + S+L AC
Sbjct: 201 QAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACC 260
Query: 249 --MGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVT 306
+ G + G HC ++G + V AL+ MY+K G + +A+ +F M ++VVT
Sbjct: 261 INLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVT 320
Query: 307 WNSMIAGYAQHG-----LAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQ 359
+N+MI+G+ Q + EA LF +M ++G++P T+ +L +C ++ G+
Sbjct: 321 YNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGR 378
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 202/367 (55%), Gaps = 1/367 (0%)
Query: 128 VMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCAL 187
++++E+ +V LS + +C R + ++ H + + VG+SL+ Y+
Sbjct: 418 MVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRK 477
Query: 188 SGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSA 247
A+ V M R+ +++T+++ F + + +M L + + M G ++ + + +SA
Sbjct: 478 VDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISA 537
Query: 248 CMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTW 307
GAL G+ HC ++ GF V N+L+ MYSKCG ++DA +FE + DVV+W
Sbjct: 538 SANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSW 597
Query: 308 NSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE 367
N +++G A +G A+S FEEM + +PD+VT+L LLS+C +G L G YF M +
Sbjct: 598 NGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKK 657
Query: 368 -HGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGI 426
+ ++P+++HY +V +LGRAG + EA +E M + PNA+I+ +LL + R GN+ +G
Sbjct: 658 IYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGE 717
Query: 427 EAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKV 486
+ A L L P A LA+LY G + R LM +K L G S +EV+ KV
Sbjct: 718 DMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKV 777
Query: 487 HRFEAQD 493
H F ++D
Sbjct: 778 HSFVSED 784
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 113/214 (52%), Gaps = 4/214 (1%)
Query: 153 LNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAG 212
L G H I G NV + +SL+ YS+ + DA RV E++V WT++++G
Sbjct: 240 LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSG 299
Query: 213 FAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSY 272
F + R + F MR ++PN FTY+++LS C +L +G+ H Q I++GF
Sbjct: 300 FVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDS 359
Query: 273 LHVDNALIAMYSKCGVID-DALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMI 331
V NAL+ MY KC + +A +F MV +VV+W ++I G HG Q+ L EM+
Sbjct: 360 TDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMV 419
Query: 332 KQGVDPDAVTYLSLLSSC---RHGGLVKEGQVYF 362
K+ V+P+ VT +L +C RH V E Y
Sbjct: 420 KREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYL 453
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 144/287 (50%), Gaps = 9/287 (3%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP 199
S V SC RD++ G + H I TGF N VGSSL LYS+C +A +F +
Sbjct: 127 FSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQ 186
Query: 200 ERNVVSWTAIIAGF--AQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYG 257
+ +SWT +I+ A++WR L+ + M + + PN FT+ LL A G L +G
Sbjct: 187 NADTISWTMMISSLVGARKWR--EALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFG 243
Query: 258 RGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQH 317
+ H II G + + +L+ YS+ ++DA+ + + +DV W S+++G+ ++
Sbjct: 244 KTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRN 303
Query: 318 GLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHY 377
A+EA+ F EM G+ P+ TY ++LS C + G+ + ++ G + D
Sbjct: 304 LRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVG 363
Query: 378 SCIVDLLGR--AGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNV 422
+ +VD+ + A + +R F V PN V W +L+ HG V
Sbjct: 364 NALVDMYMKCSASEVEASRVF--GAMVSPNVVSWTTLILGLVDHGFV 408
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 133/259 (51%), Gaps = 2/259 (0%)
Query: 156 GVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQ 215
G+ HC I G + N+ + ++L+SLY + +A ++F+EM R V +WT +I+ F +
Sbjct: 42 GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTK 101
Query: 216 EWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHV 275
L LF M S PN FT++S++ +C G + YG H +I+ GF V
Sbjct: 102 SQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVV 161
Query: 276 DNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGV 335
++L +YSKCG +A +F ++ D ++W MI+ +EA+ + EM+K GV
Sbjct: 162 GSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGV 221
Query: 336 DPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARD 395
P+ T++ LL + GL + G+ ++++ G+ + + +VD + + +A
Sbjct: 222 PPNEFTFVKLLGASSFLGL-EFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVR 280
Query: 396 FIENMPVCPNAVIWGSLLS 414
+ N + +W S++S
Sbjct: 281 VL-NSSGEQDVFLWTSVVS 298
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 219 bits (559), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 131/354 (37%), Positives = 203/354 (57%), Gaps = 7/354 (1%)
Query: 160 HCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRV 219
H + I G+ +N SSLI Y+ C+L DA V + M ++VVS + +I+G A R
Sbjct: 351 HGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRS 410
Query: 220 DMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFH-SYLHVDNA 278
D + +F MR + PN T SLL+AC S L + AH I+ + + V +
Sbjct: 411 DEAISIFCHMRDT---PNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTS 467
Query: 279 LIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPD 338
++ Y+KCG I+ A F+ + +++++W +I+ YA +GL +A++LF+EM ++G P+
Sbjct: 468 IVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPN 527
Query: 339 AVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIE 398
AVTYL+ LS+C HGGLVK+G + F SMVE +P L HYSCIVD+L RAG I A + I+
Sbjct: 528 AVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIK 587
Query: 399 NMP--VCPNAVIWGSLLSSSR-LHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGW 455
N+P V A WG++LS R + I E L LEP CS+ ++ +A+
Sbjct: 588 NLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAEKS 647
Query: 456 WNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSL 509
W VA +R+L+K++ ++ G S + + RF A DK ++ S++ V+ SL
Sbjct: 648 WEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGDKLSQSDSELNDVVQSL 701
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 172/343 (50%), Gaps = 29/343 (8%)
Query: 95 SHLRLIEDMLENSVIN-------HVGSN--LATLKTTTEMSSVMEQELGVDVCFLSHAVS 145
S +L ++M E VI+ +V S + LK EM V E + D ++ +
Sbjct: 177 SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEM--VHEAKTEPDCVTVTSVLK 234
Query: 146 SCGSKRDLNGGVQYHCLAITTGF-IANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVV 204
+C D++ G H +I GF +A+V+V +SLI +YS+ A+RVF+E RN+V
Sbjct: 235 ACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIV 294
Query: 205 SWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQI 264
SW +I+AGF R D LE+FHLM ++ + T SLL C + H I
Sbjct: 295 SWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVI 354
Query: 265 IQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAI 324
I+ G+ S ++LI Y+ C ++DDA + ++M +DVV+ ++MI+G A G + EAI
Sbjct: 355 IRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAI 414
Query: 325 SLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPK-------LDHY 377
S+F M P+A+T +SLL++C ++ S HG+ + +
Sbjct: 415 SIFCHMRDT---PNAITVISLLNACSVSADLR------TSKWAHGIAIRRSLAINDISVG 465
Query: 378 SCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHG 420
+ IVD + G I AR + + N + W ++S+ ++G
Sbjct: 466 TSIVDAYAKCGAIEMARRTFDQITE-KNIISWTVIISAYAING 507
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 113/248 (45%), Gaps = 12/248 (4%)
Query: 172 VYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRG 231
++ G+S+ Y +C R F+ M R+ VSW I+ G + L F +R
Sbjct: 61 LFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRV 120
Query: 232 SEMKPNYFTYTSLLSACMGSGALGY-GRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVID 290
+PN T ++ AC +L + G H +I+ GF V N+++ MY+ +
Sbjct: 121 WGFEPNTSTLVLVIHACR---SLWFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSL- 176
Query: 291 DALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQG-VDPDAVTYLSLLSSC 349
A +F+ M RDV++W+ +I Y Q + LF+EM+ + +PD VT S+L +C
Sbjct: 177 SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKAC 236
Query: 350 RHGGLVKEGQVYFNSMVEHGVQPKLDHYSC--IVDLLGRAGLIREA-RDFIENMPVCPNA 406
+ G+ + G D + C ++D+ + + A R F E C N
Sbjct: 237 TVMEDIDVGRSVHGFSIRRGFDLA-DVFVCNSLIDMYSKGFDVDSAFRVFDET--TCRNI 293
Query: 407 VIWGSLLS 414
V W S+L+
Sbjct: 294 VSWNSILA 301
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 271 SYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEM 330
S+L N++ Y KCG + L F+ M RD V+WN ++ G +G +E + F ++
Sbjct: 59 SWLFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKL 118
Query: 331 IKQGVDPDAVTYLSLLSSCR---------HGGLVKEG 358
G +P+ T + ++ +CR HG +++ G
Sbjct: 119 RVWGFEPNTSTLVLVIHACRSLWFDGEKIHGYVIRSG 155
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 218 bits (556), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 134/406 (33%), Positives = 215/406 (52%), Gaps = 38/406 (9%)
Query: 147 CGSKRDLNGGVQYHCLAITTG--FIANVYVGSSLISLYSRCALSGDAYR----------- 193
CG D+ G H G + +N+ + ++L+ +Y +C SG A R
Sbjct: 242 CGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMR 301
Query: 194 --------------------VFEEMPERNVVSWTAIIAGFAQEWRVDMCL-ELFHLMRGS 232
VF++MP+R++VSW +++ G++++ + ELF+ M
Sbjct: 302 SWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIV 361
Query: 233 E-MKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDD 291
E +KP+ T SL+S +G L +GR H +I++ + +ALI MY KCG+I+
Sbjct: 362 EKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIER 421
Query: 292 ALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRH 351
A +F+ +DV W SMI G A HG Q+A+ LF M ++GV P+ VT L++L++C H
Sbjct: 422 AFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSH 481
Query: 352 GGLVKEGQVYFNSMVEH-GVQPKLDHYSCIVDLLGRAGLIREARDFIE-NMPVCPNAVIW 409
GLV+EG FN M + G P+ +HY +VDLL RAG + EA+D ++ MP+ P+ +W
Sbjct: 482 SGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMW 541
Query: 410 GSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDK 469
GS+LS+ R ++ A L LEP L+N+YA+VG W + R+ M+++
Sbjct: 542 GSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENR 601
Query: 470 GLKPNPGSSWIEVKSKVHRFEAQDKSNR-RMSDILLVIDSLVDHMS 514
G+K G S + +HRF A +K N R ++I ++ L + M
Sbjct: 602 GVKKTAGYSSVVGVEGLHRFVAAEKQNHPRWTEIKRILQHLYNEMK 647
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 142/302 (47%), Gaps = 41/302 (13%)
Query: 158 QYHCLAITTGFIA-NVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQE 216
Q HC I +G ++ Y+ +SL+ Y G A +VF MP +V S+ +I G+A++
Sbjct: 151 QIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQ 210
Query: 217 WRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMG--FHSYLH 274
L+L+ M ++P+ +T SLL C + G+G H I + G + S L
Sbjct: 211 GFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLI 270
Query: 275 VDNALIAMYSKC-------------------------------GVIDDALYIFENMVGRD 303
+ NAL+ MY KC G ++ A +F+ M RD
Sbjct: 271 LSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRD 330
Query: 304 VVTWNSMIAGYAQHGLAQEAI-SLFEEM-IKQGVDPDAVTYLSLLSSCRHGGLVKEGQVY 361
+V+WNS++ GY++ G Q + LF EM I + V PD VT +SL+S + G + G+
Sbjct: 331 LVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWV 390
Query: 362 FNSMVEHGVQPKLDHY--SCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLH 419
++ +Q K D + S ++D+ + G+I A + + +W S+++ H
Sbjct: 391 HGLVIR--LQLKGDAFLSSALIDMYCKCGIIERAF-MVFKTATEKDVALWTSMITGLAFH 447
Query: 420 GN 421
GN
Sbjct: 448 GN 449
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 80/164 (48%), Gaps = 10/164 (6%)
Query: 199 PERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGR 258
P NV + +I+ + + C L+ M + P+ T+ L+ A S L +
Sbjct: 96 PNPNVFVYNTMISAVSSS--KNECFGLYSSMIRHRVSPDRQTFLYLMKA---SSFLSEVK 150
Query: 259 GAHCQIIQMG---FHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYA 315
HC II G +YL N+L+ Y + G A +F M DV ++N MI GYA
Sbjct: 151 QIHCHIIVSGCLSLGNYLW--NSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYA 208
Query: 316 QHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQ 359
+ G + EA+ L+ +M+ G++PD T LSLL C H ++ G+
Sbjct: 209 KQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGK 252
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 127/289 (43%), Gaps = 44/289 (15%)
Query: 124 EMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYS 183
EM+ V +++ D + +S + +L+ G H L I + ++ S+LI +Y
Sbjct: 357 EMTIV--EKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYC 414
Query: 184 RCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTS 243
+C + A+ VF+ E++V WT++I G A L+LF M+ + PN T +
Sbjct: 415 KCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLA 474
Query: 244 LLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRD 303
+L+AC +H +++ G H + H+ + G D
Sbjct: 475 VLTAC-----------SHSGLVEEGLHVFNHMKDKF---------------------GFD 502
Query: 304 VVT--WNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVY 361
T + S++ + G +EA + ++ K + P + S+LS+CR G ++ ++
Sbjct: 503 PETEHYGSLVDLLCRAGRVEEAKDIVQK--KMPMRPSQSMWGSILSACRGGEDIETAELA 560
Query: 362 FNSMVEHGVQPKLDH----YSCIVDLLGRAGLIREARDFIENMPVCPNA 406
+++ ++P+ + S I +GR G + R+ +EN V A
Sbjct: 561 LTELLK--LEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTA 607
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 218 bits (555), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 124/341 (36%), Positives = 192/341 (56%), Gaps = 13/341 (3%)
Query: 176 SSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMK 235
+S+I Y A+ +F+++ +++ V+WT +I+G Q L M +K
Sbjct: 404 TSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLK 463
Query: 236 PNYFTYTSLLSACMGSGALGYGRGAHCQIIQMG--FHSYLHVDNALIAMYSKCGVIDDAL 293
P TY+ LLS+ + L G+ HC I + + L + N+L++MY+KCG I+DA
Sbjct: 464 PLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAY 523
Query: 294 YIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGG 353
IF MV +D V+WNSMI G + HGLA +A++LF+EM+ G P++VT+L +LS+C H G
Sbjct: 524 EIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSG 583
Query: 354 LVKEGQVYFNSMVE-HGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSL 412
L+ G F +M E + +QP +DHY ++DLLGRAG ++EA +FI +P P+ ++G+L
Sbjct: 584 LITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGAL 643
Query: 413 LSSSRLHGNVW-------IGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKL 465
L L G W I AA L L+P + L N+YA +G + +RK
Sbjct: 644 LG---LCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKE 700
Query: 466 MKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVI 506
M KG+K PG SW+ V + + F + DKS + ++L I
Sbjct: 701 MGIKGVKKTPGCSWVVVNGRANVFLSGDKSASEAAQMVLPI 741
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 124/286 (43%), Gaps = 46/286 (16%)
Query: 171 NVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMR 230
NV +S++ Y R +AYR+F EMPERN+VSWTA+I+GFA L LF M+
Sbjct: 230 NVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMK 289
Query: 231 G--SEMKPNYFTYTSLLSACMGSGA--LGYGRGAHCQIIQMGFHSYLH---VDNALIAMY 283
+ PN T SL AC G G G H Q+I G+ + H + +L+ MY
Sbjct: 290 KDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMY 349
Query: 284 SKCGVI-----------------------------DDALYIFENMVG-RDVVTWNSMIAG 313
+ G+I + A +FE + D V+W SMI G
Sbjct: 350 ASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDG 409
Query: 314 YAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPK 373
Y + G A LF+++ D D VT+ ++S L E + MV G++P
Sbjct: 410 YLEAGDVSRAFGLFQKL----HDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPL 465
Query: 374 LDHYSCIVDLLGRAGLIREARDF---IENMPVC--PNAVIWGSLLS 414
YS ++ G + + + I C P+ ++ SL+S
Sbjct: 466 NSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVS 511
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 104/205 (50%), Gaps = 15/205 (7%)
Query: 167 GFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELF 226
G I V +SL+S Y++ +A +FE MPERN+V+ A++ G+ + R++ LF
Sbjct: 72 GSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLF 131
Query: 227 HLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKC 286
EM N ++T +L+A G ++ + S+ N L+ +
Sbjct: 132 R-----EMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSW----NTLVTGLIRN 182
Query: 287 GVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLL 346
G ++ A +F+ M RDVV+WN+MI GY ++ +EA LF +M ++ V VT+ S++
Sbjct: 183 GDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNV----VTWTSMV 238
Query: 347 -SSCRHGGLVKEGQVYFNSMVEHGV 370
CR+G V+E F M E +
Sbjct: 239 YGYCRYGD-VREAYRLFCEMPERNI 262
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 2/116 (1%)
Query: 144 VSSCGSKRDLNGGVQYHC-LAITTG-FIANVYVGSSLISLYSRCALSGDAYRVFEEMPER 201
+SS G+ +L+ G HC +A TT + ++ + +SL+S+Y++C DAY +F +M ++
Sbjct: 473 LSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQK 532
Query: 202 NVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYG 257
+ VSW ++I G + D L LF M S KPN T+ +LSAC SG + G
Sbjct: 533 DTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRG 588
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 102/195 (52%), Gaps = 13/195 (6%)
Query: 171 NVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMR 230
N+ +++++ Y +C +A+ +F EMP +NVVSWT ++ + R + +ELF M
Sbjct: 107 NIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDAVELFDEMP 165
Query: 231 GSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVID 290
+ N ++ +L++ + +G + + + S+ NA+I Y + ++
Sbjct: 166 ----ERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSW----NAMIKGYIENDGME 217
Query: 291 DALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCR 350
+A +F +M ++VVTW SM+ GY ++G +EA LF EM ++ + V++ +++S
Sbjct: 218 EAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNI----VSWTAMISGFA 273
Query: 351 HGGLVKEGQVYFNSM 365
L +E + F M
Sbjct: 274 WNELYREALMLFLEM 288
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 91/185 (49%), Gaps = 17/185 (9%)
Query: 236 PNYFTY-------TSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGV 288
PNY +Y +L+ + G L + R +I Q G + + +L++ Y+K G
Sbjct: 33 PNYGSYRRGFSNEEALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGY 92
Query: 289 IDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSS 348
+D+A +FE M R++VT N+M+ GY + EA +LF EM K + V++ +L++
Sbjct: 93 LDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPK-----NVVSWTVMLTA 147
Query: 349 CRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVI 408
G ++ F+ M E V ++ +V L R G + +A+ + MP + V
Sbjct: 148 LCDDGRSEDAVELFDEMPERNVVS----WNTLVTGLIRNGDMEKAKQVFDAMP-SRDVVS 202
Query: 409 WGSLL 413
W +++
Sbjct: 203 WNAMI 207
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 132/401 (32%), Positives = 209/401 (52%), Gaps = 12/401 (2%)
Query: 137 VCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFE 196
VC L +S+C + L G + H I +++V S++SLY C +F+
Sbjct: 499 VCSL---LSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFD 555
Query: 197 EMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGY 256
M ++++VSW +I G+ Q D L +F M ++ + + AC +L
Sbjct: 556 AMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRL 615
Query: 257 GRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQ 316
GR AH ++ + +LI MY+K G I + +F + + +WN+MI GY
Sbjct: 616 GREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGI 675
Query: 317 HGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSM-VEHGVQPKLD 375
HGLA+EAI LFEEM + G +PD +T+L +L++C H GL+ EG Y + M G++P L
Sbjct: 676 HGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLK 735
Query: 376 HYSCIVDLLGRAGLIREA-RDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLL 434
HY+C++D+LGRAG + +A R E M + IW SLLSS R+H N+ +G + A
Sbjct: 736 HYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFE 795
Query: 435 LEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDK 494
LEP L+NLYA +G W V +VR+ M + L+ + G SWIE+ KV F ++
Sbjct: 796 LEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGER 855
Query: 495 ---SNRRMSDILLVIDSLVDHM----SSLSLQSHMYEEENI 528
+ + +++ + M ++S+Q + EEE I
Sbjct: 856 FLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKI 896
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 114/215 (53%), Gaps = 8/215 (3%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV 203
+ +C D+ G+ H L + TG + +V+VG++L+S Y DA ++F+ MPERN+
Sbjct: 194 IKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNL 253
Query: 204 VSWTAIIA-----GFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGR 258
VSW ++I GF++E + + E+ P+ T ++L C +G G+
Sbjct: 254 VSWNSMIRVFSDNGFSEESFL-LLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGK 312
Query: 259 GAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHG 318
G H +++ L ++NAL+ MYSKCG I +A IF+ ++VV+WN+M+ G++ G
Sbjct: 313 GVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEG 372
Query: 319 LAQEAISLFEEMIKQGVD--PDAVTYLSLLSSCRH 351
+ +M+ G D D VT L+ + C H
Sbjct: 373 DTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH 407
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 146/285 (51%), Gaps = 7/285 (2%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYV-GSSLISLYSRCALSGDAYRVFEEMPERN 202
+ + G ++D+ G + H L + + N V + +I++Y+ C D+ VF+ + +N
Sbjct: 91 LQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKN 150
Query: 203 VVSWTAIIAGFAQEWRVDMCLELF-HLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAH 261
+ W A+I+ +++ D LE F ++ +++ P++FTY ++ AC G +G G H
Sbjct: 151 LFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVH 210
Query: 262 CQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQ 321
+++ G + V NAL++ Y G + DAL +F+ M R++V+WNSMI ++ +G ++
Sbjct: 211 GLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSE 270
Query: 322 EAISLFEEMIKQGVD----PDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHY 377
E+ L EM+++ D PD T +++L C + G+ V+ + +L
Sbjct: 271 ESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLN 330
Query: 378 SCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNV 422
+ ++D+ + G I A+ I M N V W +++ G+
Sbjct: 331 NALMDMYSKCGCITNAQ-MIFKMNNNKNVVSWNTMVGGFSAEGDT 374
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 139/290 (47%), Gaps = 1/290 (0%)
Query: 131 QELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGD 190
+++ D + +AV C + L + HC ++ F+ N V ++ ++ Y++C
Sbjct: 389 EDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSY 448
Query: 191 AYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMG 250
A RVF + + V SW A+I G AQ + L+ M+ S + P+ FT SLLSAC
Sbjct: 449 AQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSK 508
Query: 251 SGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSM 310
+L G+ H II+ L V +++++Y CG + +F+ M + +V+WN++
Sbjct: 509 LKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTV 568
Query: 311 IAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGV 370
I GY Q+G A+ +F +M+ G+ ++ + + +C ++ G+ ++H +
Sbjct: 569 ITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLL 628
Query: 371 QPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHG 420
+ ++D+ + G I ++ + A W +++ +HG
Sbjct: 629 EDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS-WNAMIMGYGIHG 677
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 129/283 (45%), Gaps = 6/283 (2%)
Query: 136 DVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVF 195
DV L + C +R++ G H A+ + + ++L+ +YS+C +A +F
Sbjct: 291 DVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIF 350
Query: 196 EEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLM--RGSEMKPNYFTYTSLLSACMGSGA 253
+ +NVVSW ++ GF+ E ++ M G ++K + T + + C
Sbjct: 351 KMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESF 410
Query: 254 LGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAG 313
L + HC ++ F V NA +A Y+KCG + A +F + + V +WN++I G
Sbjct: 411 LPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGG 470
Query: 314 YAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPK 373
+AQ + ++ +M G+ PD+ T SLLS+C ++ G+ ++ + ++
Sbjct: 471 HAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERD 530
Query: 374 LDHYSCIVDLLGRAGLIREARDFIENMP----VCPNAVIWGSL 412
L Y ++ L G + + + M V N VI G L
Sbjct: 531 LFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYL 573
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 139/447 (31%), Positives = 221/447 (49%), Gaps = 73/447 (16%)
Query: 107 SVINHV----GSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCL 162
S+ NHV ++ KT + + + ++ + D + + +C + G +H
Sbjct: 78 SICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGK 137
Query: 163 AITTGFIANVYVGSSLISLYSRCALSG-------------------------------DA 191
+ GF+ N YV ++LI ++ C G +A
Sbjct: 138 VVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEA 197
Query: 192 YRVFEEMP-------------------------------ERNVVSWTAIIAGFAQEWRVD 220
R+F+EMP E++VV+W A+I+G+
Sbjct: 198 MRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPK 257
Query: 221 MCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMG-FHSYLHVD--- 276
L +F MR + P+ T SLLSAC G L G+ H I++ S ++V
Sbjct: 258 EALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPI 317
Query: 277 -NALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGV 335
NALI MY+KCG ID A+ +F + RD+ TWN++I G A H A+ +I +FEEM + V
Sbjct: 318 WNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHH-AEGSIEMFEEMQRLKV 376
Query: 336 DPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE-HGVQPKLDHYSCIVDLLGRAGLIREAR 394
P+ VT++ ++ +C H G V EG+ YF+ M + + ++P + HY C+VD+LGRAG + EA
Sbjct: 377 WPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAF 436
Query: 395 DFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVG 454
F+E+M + PNA++W +LL + +++GNV +G A E L + S L+N+YAS G
Sbjct: 437 MFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTG 496
Query: 455 WWNQVARVRKLMKDKGLKPNPGSSWIE 481
W+ V +VRK+ D +K G S IE
Sbjct: 497 QWDGVQKVRKMFDDTRVKKPTGVSLIE 523
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 155/339 (45%), Gaps = 26/339 (7%)
Query: 146 SCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLI---SLYSRCALSGDAYRVFEEMPERN 202
+C + R L Q H + G ++N+ V LI SL AL A+++F+E+P+ +
Sbjct: 21 NCKNIRTLK---QIHASMVVNGLMSNLSVVGELIYSASLSVPGALKY-AHKLFDEIPKPD 76
Query: 203 VVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHC 262
V ++ G AQ + + + L+ M + P+ +T+T +L AC G H
Sbjct: 77 VSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHG 136
Query: 263 QIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQE 322
++++ GF +V NALI ++ CG + A +F++ V W+SM +GYA+ G E
Sbjct: 137 KVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDE 196
Query: 323 AISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGV---QPKLDHYSC 379
A+ LF+EM + D V + +++ C + + F+ E V + Y
Sbjct: 197 AMRLFDEMPYK----DQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVN 252
Query: 380 IVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIG-------IEAAESR 432
G+ +E RD E+ P+ V SLLS+ + G++ G +E A
Sbjct: 253 CGYPKEALGIFKEMRDAGEH----PDVVTILSLLSACAVLGDLETGKRLHIYILETASVS 308
Query: 433 LLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGL 471
+ G + L ++YA G ++ V + +KD+ L
Sbjct: 309 SSIYVG-TPIWNALIDMYAKCGSIDRAIEVFRGVKDRDL 346
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 133/375 (35%), Positives = 196/375 (52%), Gaps = 7/375 (1%)
Query: 146 SCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPE--RNV 203
+C + + G H +G N+ V SSL+ +Y +C A RVF+ M RNV
Sbjct: 140 ACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNV 199
Query: 204 VSWTAIIAGFAQEWRVDMCLELFHLMRG--SEMKPNYFTYTSLLSACMGSGALGYGRGAH 261
VSWT++I +AQ R +ELF + + N F S++SAC G L +G+ AH
Sbjct: 200 VSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAH 259
Query: 262 CQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQ 321
+ + G+ S V +L+ MY+KCG + A IF + V+++ SMI A+HGL +
Sbjct: 260 GLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGE 319
Query: 322 EAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE-HGVQPKLDHYSCI 380
A+ LF+EM+ ++P+ VT L +L +C H GLV EG Y + M E +GV P HY+C+
Sbjct: 320 AAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCV 379
Query: 381 VDLLGRAGLIREARDFIENMPVCPN--AVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPG 438
VD+LGR G + EA + + + V A++WG+LLS+ RLHG V I EA++ +
Sbjct: 380 VDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQ 439
Query: 439 CSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRR 498
++ L+N YA G W +R MK G SWIE K V+ F A D S
Sbjct: 440 VTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKDSVYVFHAGDLSCDE 499
Query: 499 MSDILLVIDSLVDHM 513
+I + L M
Sbjct: 500 SGEIERFLKDLEKRM 514
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 130/266 (48%), Gaps = 6/266 (2%)
Query: 160 HCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRV 219
H L + GF ++ + + L+ Y + A ++F+EM E NVVSWT++I+G+ +
Sbjct: 52 HTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKP 111
Query: 220 DMCLELFHLMRGSE-MKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNA 278
L +F M + PN +T+ S+ AC G+ H ++ G + V ++
Sbjct: 112 QNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSS 171
Query: 279 LIAMYSKCGVIDDALYIFENMV--GRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVD 336
L+ MY KC ++ A +F++M+ GR+VV+W SMI YAQ+ EAI LF
Sbjct: 172 LVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTS 231
Query: 337 PDAVTYL--SLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREAR 394
A ++ S++S+C G ++ G+V + G + + ++D+ + G + A
Sbjct: 232 DRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAE 291
Query: 395 DFIENMPVCPNAVIWGSLLSSSRLHG 420
+ C + + + S++ + HG
Sbjct: 292 KIFLRIR-CHSVISYTSMIMAKAKHG 316
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 90/187 (48%), Gaps = 12/187 (6%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP 199
L+ +S+C S L G H L G+ +N V +SL+ +Y++C A ++F +
Sbjct: 239 LASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIR 298
Query: 200 ERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRG 259
+V+S+T++I A+ + ++LF M + PNY T +L AC SG + G
Sbjct: 299 CHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEG-- 356
Query: 260 AHCQIIQMGFHSYLHVDNA-----LIAMYSKCGVIDDALYIFENM-VGRD--VVTWNSMI 311
+ + + Y V ++ ++ M + G +D+A + + + VG + + W +++
Sbjct: 357 --LEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALL 414
Query: 312 AGYAQHG 318
+ HG
Sbjct: 415 SAGRLHG 421
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 128/356 (35%), Positives = 196/356 (55%), Gaps = 20/356 (5%)
Query: 163 AITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMC 222
+ TGFI N + + C L F+ MPE+NV+SWT +I G+ + +
Sbjct: 269 TMITGFIRNREMNKA-------CGL-------FDRMPEKNVISWTTMITGYVENKENEEA 314
Query: 223 LELF-HLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLH-VDNALI 280
L +F ++R +KPN TY S+LSAC L G+ H Q+I H V +AL+
Sbjct: 315 LNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIH-QLISKSVHQKNEIVTSALL 373
Query: 281 AMYSKCGVIDDALYIFEN--MVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPD 338
MYSK G + A +F+N + RD+++WNSMIA YA HG +EAI ++ +M K G P
Sbjct: 374 NMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPS 433
Query: 339 AVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQP-KLDHYSCIVDLLGRAGLIREARDFI 397
AVTYL+LL +C H GLV++G +F +V P + +HY+C+VDL GRAG +++ +FI
Sbjct: 434 AVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFI 493
Query: 398 ENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWN 457
+ +G++LS+ +H V I E + L + T ++N+YA+ G
Sbjct: 494 NCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKRE 553
Query: 458 QVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSLVDHM 513
+ A +R MK+KGLK PG SW++V + H F DKS+ + + ++ L + M
Sbjct: 554 EAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSDLRNKM 609
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 142/295 (48%), Gaps = 48/295 (16%)
Query: 171 NVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMR 230
NV +++I Y++ A +F+EMPERN+VSW +++ Q R+D + LF M
Sbjct: 139 NVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMP 198
Query: 231 GSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVID 290
+ + ++T+++ +G + R + + S+ NA+I Y++ ID
Sbjct: 199 ----RRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISW----NAMITGYAQNNRID 250
Query: 291 DALYIFENMVGRDVVTWN-------------------------------SMIAGYAQHGL 319
+A +F+ M RD +WN +MI GY ++
Sbjct: 251 EADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKE 310
Query: 320 AQEAISLFEEMIKQG-VDPDAVTYLSLLSSCRH-GGLVKEGQVYFNSMVEHGVQPKLDHY 377
+EA+++F +M++ G V P+ TY+S+LS+C GLV+ Q++ ++ V K +
Sbjct: 311 NEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIH--QLISKSVHQKNEIV 368
Query: 378 -SCIVDLLGRAGLIREARDFIENMPVCPNAVI-WGSLLSSSRLHGNVWIGIEAAE 430
S ++++ ++G + AR +N VC +I W S+++ HG+ G EA E
Sbjct: 369 TSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGH---GKEAIE 420
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 111/228 (48%), Gaps = 23/228 (10%)
Query: 178 LISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPN 237
LI + +A ++F+ +PER+VV+WT +I G+ + + ELF + + + N
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRV---DSRKN 108
Query: 238 YFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVD----NALIAMYSKCGVIDDAL 293
T+T+++S GY R I +M F + N +I Y++ G ID AL
Sbjct: 109 VVTWTAMVS--------GYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKAL 160
Query: 294 YIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGG 353
+F+ M R++V+WNSM+ Q G EA++LFE M ++ D V++ +++ G
Sbjct: 161 ELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRR----DVVSWTAMVDGLAKNG 216
Query: 354 LVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMP 401
V E + F+ M E + ++ ++ + I EA + MP
Sbjct: 217 KVDEARRLFDCMPERNIIS----WNAMITGYAQNNRIDEADQLFQVMP 260
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 88/160 (55%), Gaps = 8/160 (5%)
Query: 171 NVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMR 230
NV ++++S Y R A +F+EMPERNVVSW +I G+AQ R+D LELF M
Sbjct: 108 NVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEM- 166
Query: 231 GSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVID 290
+ N ++ S++ A + G + ++ + S+ A++ +K G +D
Sbjct: 167 ---PERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSW----TAMVDGLAKNGKVD 219
Query: 291 DALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEM 330
+A +F+ M R++++WN+MI GYAQ+ EA LF+ M
Sbjct: 220 EARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVM 259
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 70/144 (48%), Gaps = 8/144 (5%)
Query: 279 LIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPD 338
LI K G I +A +F+ + RDVVTW +I GY + G +EA LF+ + + +
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSR---KN 108
Query: 339 AVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIE 398
VT+ +++S + ++ F M E V ++ ++D ++G I +A + +
Sbjct: 109 VVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVS----WNTMIDGYAQSGRIDKALELFD 164
Query: 399 NMPVCPNAVIWGSLLSSSRLHGNV 422
MP N V W S++ + G +
Sbjct: 165 EMPE-RNIVSWNSMVKALVQRGRI 187
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEE--MPER 201
+S+C L G Q H L + N V S+L+++YS+ A ++F+ + +R
Sbjct: 338 LSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQR 397
Query: 202 NVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYG 257
+++SW ++IA +A +E+++ MR KP+ TY +LL AC +G + G
Sbjct: 398 DLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKG 453
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 119/345 (34%), Positives = 195/345 (56%), Gaps = 5/345 (1%)
Query: 176 SSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMK 235
S+LI Y A ++FE MPE+NVVSWT +I GF+Q + + + M +K
Sbjct: 231 STLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLK 290
Query: 236 PNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYI 295
PN +T ++LSAC SGALG G H I+ G + AL+ MY+KCG +D A +
Sbjct: 291 PNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATV 350
Query: 296 FENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLV 355
F NM +D+++W +MI G+A HG +AI F +M+ G PD V +L++L++C + V
Sbjct: 351 FSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEV 410
Query: 356 KEGQVYFNSM-VEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLS 414
G +F+SM +++ ++P L HY +VDLLGRAG + EA + +ENMP+ P+ W +L
Sbjct: 411 DLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYR 470
Query: 415 SSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPN 474
+ + H +++ L L+P + L +AS G V + R ++ + + +
Sbjct: 471 ACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERS 530
Query: 475 PGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSLVDHMSSLSLQ 519
G S+IE+ ++++F A D S++ +I L +D ++ SL++Q
Sbjct: 531 LGWSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEII----SLAIQ 571
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 120/261 (45%), Gaps = 34/261 (13%)
Query: 98 RLIEDMLENSVIN---------HVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCG 148
+L E M E +V++ G + T EM +E+ L + ++ +S+C
Sbjct: 248 QLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEM---LEKGLKPNEYTIAAVLSACS 304
Query: 149 SKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTA 208
L G++ H + G + +G++L+ +Y++C A VF M ++++SWTA
Sbjct: 305 KSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTA 364
Query: 209 IIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMG 268
+I G+A R ++ F M S KP+ + ++L+AC+ S + G +
Sbjct: 365 MIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLG---------LN 415
Query: 269 FHSYLHVDNAL----------IAMYSKCGVIDDALYIFENM-VGRDVVTWNSMIAGYAQH 317
F + +D A+ + + + G +++A + ENM + D+ TW ++ H
Sbjct: 416 FFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAH 475
Query: 318 GLAQEAISLFEEMIKQGVDPD 338
+ A S+ + +++ +DP+
Sbjct: 476 KGYRRAESVSQNLLE--LDPE 494
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/353 (19%), Positives = 130/353 (36%), Gaps = 68/353 (19%)
Query: 141 SHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPE 200
SH +S + +D H + G +++ V + L+S S + +F E
Sbjct: 30 SHFISLIHACKDTASLRHVHAQILRRGVLSS-RVAAQLVSCSSLLKSPDYSLSIFRNSEE 88
Query: 201 RNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGA 260
RN A+I G + R + + F LM +KP+ T+ +L + G GR
Sbjct: 89 RNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRAL 148
Query: 261 HCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFE----------------------- 297
H ++ V +L+ MY+K G + A +FE
Sbjct: 149 HAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCR 208
Query: 298 ------------NMVGRDVVTWNSMIAGYAQHGLAQEAISLFE----------------- 328
+M R+ +W+++I GY G A LFE
Sbjct: 209 AKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGF 268
Query: 329 --------------EMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKL 374
EM+++G+ P+ T ++LS+C G + G ++++G++
Sbjct: 269 SQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDR 328
Query: 375 DHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIE 427
+ +VD+ + G + A NM + + W +++ +HG I+
Sbjct: 329 AIGTALVDMYAKCGELDCAATVFSNMN-HKDILSWTAMIQGWAVHGRFHQAIQ 380
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 124/354 (35%), Positives = 199/354 (56%), Gaps = 6/354 (1%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP 199
++ V+SC + G H + G+ + +SLI++Y++C + +FE M
Sbjct: 349 IASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMN 408
Query: 200 ERNVVSWTAIIAGFAQEWRVDMC--LELFHLMRGSEMKP-NYFTYTSLLSACMGSGALGY 256
ER++VSW AII+G+AQ VD+C L LF M+ ++ + FT SLL AC +GAL
Sbjct: 409 ERDLVSWNAIISGYAQN--VDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPV 466
Query: 257 GRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQ 316
G+ HC +I+ VD AL+ MYSKCG ++ A F+++ +DVV+W +IAGY
Sbjct: 467 GKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGF 526
Query: 317 HGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMV-EHGVQPKLD 375
HG A+ ++ E + G++P+ V +L++LSSC H G+V++G F+SMV + GV+P +
Sbjct: 527 HGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHE 586
Query: 376 HYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLL 435
H +C+VDLL RA I +A F + P+ + G +L + R +G + E + L
Sbjct: 587 HLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIEL 646
Query: 436 EPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRF 489
+PG + +L + +A++ W+ V+ M+ GLK PG S IE+ K F
Sbjct: 647 KPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTF 700
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 178/336 (52%), Gaps = 6/336 (1%)
Query: 143 AVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERN 202
++S G+ DL G HC + TGF ++++ ++LI++Y +C +YRV E +P ++
Sbjct: 251 SLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKD 310
Query: 203 VVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHC 262
VV WT +I+G + R + L +F M S + S++++C G+ G H
Sbjct: 311 VVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHG 370
Query: 263 QIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQE 322
+++ G+ N+LI MY+KCG +D +L IFE M RD+V+WN++I+GYAQ+ +
Sbjct: 371 YVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCK 430
Query: 323 AISLFEEMIKQGVDP-DAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIV 381
A+ LFEEM + V D+ T +SLL +C G + G++ ++ ++P + +V
Sbjct: 431 ALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALV 490
Query: 382 DLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLL--LEPGC 439
D+ + G + A+ +++ + V WG L++ HG I +E L +EP
Sbjct: 491 DMYSKCGYLEAAQRCFDSIS-WKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNH 549
Query: 440 SATLQQLANLYASVGWWNQVARV-RKLMKDKGLKPN 474
L L++ + G Q ++ +++D G++PN
Sbjct: 550 VIFLAVLSSCSHN-GMVQQGLKIFSSMVRDFGVEPN 584
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 150/287 (52%), Gaps = 7/287 (2%)
Query: 160 HCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRV 219
H A+ GF ++ V +S+++LY +C GDA +F++M +R++VSW +I+G+A +
Sbjct: 167 HDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNM 226
Query: 220 DMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNAL 279
L+L + MRG ++P+ T+ + LS L GR HCQI++ GF +H+ AL
Sbjct: 227 SEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTAL 286
Query: 280 IAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDA 339
I MY KCG + + + E + +DVV W MI+G + G A++A+ +F EM++ G D +
Sbjct: 287 ITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSS 346
Query: 340 VTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIEN 399
S+++SC G G ++ HG + ++ + + G + ++ E
Sbjct: 347 EAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFER 406
Query: 400 MPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQL 446
M + V W +++S + ++ ++ LL E T+QQ+
Sbjct: 407 MNE-RDLVSWNAIISGYAQN------VDLCKALLLFEEMKFKTVQQV 446
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 155/309 (50%), Gaps = 4/309 (1%)
Query: 106 NSVINHVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAIT 165
NS INH+ S+ + + SS++ +L D + +C S + L+ G+ H +
Sbjct: 15 NSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLV 74
Query: 166 TGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLEL 225
GF ++ Y+ SSL++LY++ L A +VFEEM ER+VV WTA+I +++ V L
Sbjct: 75 NGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSL 134
Query: 226 FHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSK 285
+ MR +KP T +LS + L + H + GF + V N+++ +Y K
Sbjct: 135 VNEMRFQGIKPGPVTLLEMLSGVLEITQL---QCLHDFAVIYGFDCDIAVMNSMLNLYCK 191
Query: 286 CGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSL 345
C + DA +F+ M RD+V+WN+MI+GYA G E + L M G+ PD T+ +
Sbjct: 192 CDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGAS 251
Query: 346 LSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPN 405
LS ++ G++ +V+ G + + ++ + + G + +E +P +
Sbjct: 252 LSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPN-KD 310
Query: 406 AVIWGSLLS 414
V W ++S
Sbjct: 311 VVCWTVMIS 319
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 118/252 (46%), Gaps = 38/252 (15%)
Query: 223 LELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAM 282
L F M +++ P+ FT+ SLL AC L +G H Q++ GF S ++ ++L+ +
Sbjct: 31 LSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNL 90
Query: 283 YSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTY 342
Y+K G++ A +FE M RDVV W +MI Y++ G+ EA SL EM QG+ P VT
Sbjct: 91 YAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTL 150
Query: 343 LSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPV 402
L +LS + + Q + V +G + + +++L + + +A+D + M
Sbjct: 151 LEMLSGVLE---ITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQ 207
Query: 403 CPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARV 462
+ V W +++S YASVG +++ ++
Sbjct: 208 -RDMVSWNTMISG----------------------------------YASVGNMSEILKL 232
Query: 463 RKLMKDKGLKPN 474
M+ GL+P+
Sbjct: 233 LYRMRGDGLRPD 244
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 116/322 (36%), Positives = 186/322 (57%), Gaps = 4/322 (1%)
Query: 171 NVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLM- 229
+V +++I Y++ A +F++MP R+VV++ +++AG+ Q LE+F M
Sbjct: 282 DVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDME 341
Query: 230 RGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVI 289
+ S + P+ T +L A G L H I++ F+ + ALI MYSKCG I
Sbjct: 342 KESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSI 401
Query: 290 DDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSC 349
A+ +FE + + + WN+MI G A HGL + A + ++ + + PD +T++ +L++C
Sbjct: 402 QHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNAC 461
Query: 350 RHGGLVKEGQVYFNSMV-EHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVI 408
H GLVKEG + F M +H ++P+L HY C+VD+L R+G I A++ IE MPV PN VI
Sbjct: 462 SHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVI 521
Query: 409 WGSLLSSSRLHGNVWIGIEAAESRLLLEPGCS-ATLQQLANLYASVGWWNQVARVRKLMK 467
W + L++ H G E L+L+ G + ++ L+N+YAS G W V RVR +MK
Sbjct: 522 WRTFLTACSHHKEFETG-ELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMK 580
Query: 468 DKGLKPNPGSSWIEVKSKVHRF 489
++ ++ PG SWIE+ +VH F
Sbjct: 581 ERKIEKIPGCSWIELDGRVHEF 602
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 116/223 (52%), Gaps = 19/223 (8%)
Query: 130 EQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSG 189
E + VD LS + +C + GG+Q H TG +++++ + LI LY +C G
Sbjct: 114 ENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLG 173
Query: 190 DAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACM 249
+ ++F+ MP+R+ VS+ ++I G+ + + ELF LM EMK N ++ S++S
Sbjct: 174 LSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMP-MEMK-NLISWNSMIS--- 228
Query: 250 GSGALGYGRGAH-CQIIQMGFHSYLHVD----NALIAMYSKCGVIDDALYIFENMVGRDV 304
GY + + I F D N++I Y K G I+DA +F+ M RDV
Sbjct: 229 -----GYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDV 283
Query: 305 VTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLS 347
VTW +MI GYA+ G A +LF++M + D V Y S+++
Sbjct: 284 VTWATMIDGYAKLGFVHHAKTLFDQMPHR----DVVAYNSMMA 322
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 125/303 (41%), Gaps = 52/303 (17%)
Query: 142 HAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYS---RCALSGDAYRVFEEM 198
H + SC + D+N Q H I TG I N + + ++ ++ R L+ A VF E
Sbjct: 17 HVLGSCKTSDDVN---QIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEY 73
Query: 199 --------PERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMG 250
+ W A+I + L L LM + + + F+ + +L AC
Sbjct: 74 HVCSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSR 133
Query: 251 SGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSM 310
G + G H + + G S L + N LI +Y KCG + + +F+ M RD V++NSM
Sbjct: 134 LGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSM 193
Query: 311 IAGYAQHGLAQEAISLFEEM-------------------IKQGVD-----------PDAV 340
I GY + GL A LF+ M GVD D +
Sbjct: 194 IDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLI 253
Query: 341 TYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLD--HYSCIVDLLGRAGLIREARDFIE 398
++ S++ G +++ + F+ V P+ D ++ ++D + G + A+ +
Sbjct: 254 SWNSMIDGYVKHGRIEDAKGLFD------VMPRRDVVTWATMIDGYAKLGFVHHAKTLFD 307
Query: 399 NMP 401
MP
Sbjct: 308 QMP 310
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 107/269 (39%), Gaps = 62/269 (23%)
Query: 153 LNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAG 212
L+ + H + F +G +LI +YS+C A VFE + +++ W A+I G
Sbjct: 366 LSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGG 425
Query: 213 FA----QEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMG 268
A E DM L++ L +KP+ T+ +L+AC
Sbjct: 426 LAIHGLGESAFDMLLQIERL----SLKPDDITFVGVLNAC-------------------- 461
Query: 269 FHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVT-----WNSMIAGYAQHGLAQEA 323
S G++ + L FE M + + + M+ ++ G + A
Sbjct: 462 ---------------SHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELA 506
Query: 324 ISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMV-EHGVQPKLDHYSCIVD 382
+L EEM V+P+ V + + L++C H + G++ ++ + G P Y + +
Sbjct: 507 KNLIEEM---PVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPS--SYVLLSN 561
Query: 383 LLGRAGLIREARDF--------IENMPVC 403
+ G+ ++ R IE +P C
Sbjct: 562 MYASFGMWKDVRRVRTMMKERKIEKIPGC 590
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 215 bits (547), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 120/350 (34%), Positives = 187/350 (53%), Gaps = 2/350 (0%)
Query: 133 LGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAY 192
+ +D L + C ++ G+ H AI +G V + LI++YS+
Sbjct: 343 MKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVL 402
Query: 193 RVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFH-LMRGSEMKPNYFTYTSLLSACMGS 251
+FE++ E ++SW ++I+G Q R E+FH +M + P+ T SLL+ C
Sbjct: 403 FLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQL 462
Query: 252 GALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMI 311
L G+ H ++ F + V ALI MY+KCG A +F+++ TWNSMI
Sbjct: 463 CCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMI 522
Query: 312 AGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMV-EHGV 370
+GY+ GL A+S + EM ++G+ PD +T+L +LS+C HGG V EG++ F +M+ E G+
Sbjct: 523 SGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGI 582
Query: 371 QPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAE 430
P L HY+ +V LLGRA L EA I M + P++ +WG+LLS+ +H + +G A
Sbjct: 583 SPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVAR 642
Query: 431 SRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWI 480
+L+ ++NLYA+ W+ V RVR +MKD G G S I
Sbjct: 643 KMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 692
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 109/210 (51%), Gaps = 2/210 (0%)
Query: 139 FLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEM 198
FL +S S + VQ H +G VYV +SL++LY + A +F+EM
Sbjct: 54 FLQATTTSFNSFKLQVEQVQTH--LTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEM 111
Query: 199 PERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGR 258
PER+ V W A+I G+++ +LF +M P+ T +LL C G + GR
Sbjct: 112 PERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGR 171
Query: 259 GAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHG 318
H + G V NALI+ YSKC + A +F M + V+WN+MI Y+Q G
Sbjct: 172 SVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSG 231
Query: 319 LAQEAISLFEEMIKQGVDPDAVTYLSLLSS 348
L +EAI++F+ M ++ V+ VT ++LLS+
Sbjct: 232 LQEEAITVFKNMFEKNVEISPVTIINLLSA 261
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 128/262 (48%), Gaps = 2/262 (0%)
Query: 160 HCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRV 219
HCL + G + ++ V +SL+ YSRC A R++ + ++V T+I++ +A++ +
Sbjct: 269 HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDM 328
Query: 220 DMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNAL 279
D+ + F R MK + +L C S + G H I+ G + V N L
Sbjct: 329 DIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGL 388
Query: 280 IAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEE-MIKQGVDPD 338
I MYSK ++ L++FE + +++WNS+I+G Q G A A +F + M+ G+ PD
Sbjct: 389 ITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPD 448
Query: 339 AVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIE 398
A+T SLL+ C + G+ + + + + + ++D+ + G +A +
Sbjct: 449 AITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFK 508
Query: 399 NMPVCPNAVIWGSLLSSSRLHG 420
++ P W S++S L G
Sbjct: 509 SIKA-PCTATWNSMISGYSLSG 529
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 89/182 (48%), Gaps = 9/182 (4%)
Query: 223 LELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQ--IIQMGFHSYLHVDNALI 280
+ +F + S + PN+FT + L A S + Q + + G +++V +L+
Sbjct: 33 ITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLL 92
Query: 281 AMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAV 340
+Y K G + A +F+ M RD V WN++I GY+++G +A LF M++QG P A
Sbjct: 93 NLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSAT 152
Query: 341 TYLSLLSSCRHGGLVKEGQ----VYFNSMVEHGVQPK---LDHYSCIVDLLGRAGLIREA 393
T ++LL C G V +G+ V S +E Q K + YS +L L RE
Sbjct: 153 TLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREM 212
Query: 394 RD 395
+D
Sbjct: 213 KD 214
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 133/403 (33%), Positives = 206/403 (51%), Gaps = 18/403 (4%)
Query: 97 LRLIEDMLENSVINHVGSNLATLKTTTEMSSVME-----QELGVDV--CFLSHAVSSCGS 149
LR+ ED+ + +V+ GS ++ S +E Q GV + + +CG
Sbjct: 162 LRVFEDIPQWNVVAW-GSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGR 220
Query: 150 KRDLNGGVQYHCLAITTGFIA--------NVYVGSSLISLYSRCALSGDAYRVFEEMPER 201
+D+ G +H GF NV + +SLI +Y++C A +F+ MPER
Sbjct: 221 CKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPER 280
Query: 202 NVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAH 261
+VSW +II G++Q + L +F M + P+ T+ S++ A M G G+ H
Sbjct: 281 TLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIH 340
Query: 262 CQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQ 321
+ + GF + AL+ MY+K G + A FE++ +D + W +I G A HG
Sbjct: 341 AYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGN 400
Query: 322 EAISLFEEMIKQG-VDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE-HGVQPKLDHYSC 379
EA+S+F+ M ++G PD +TYL +L +C H GLV+EGQ YF M + HG++P ++HY C
Sbjct: 401 EALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGC 460
Query: 380 IVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGC 439
+VD+L RAG EA ++ MPV PN IWG+LL+ +H N+ + E
Sbjct: 461 MVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELG 520
Query: 440 SATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEV 482
S L+N+YA G W V +R+ MK K + G S +E
Sbjct: 521 SGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVET 563
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 182/380 (47%), Gaps = 20/380 (5%)
Query: 136 DVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVF 195
D + + +C RD+ G H + TGF N+YV + L+ +Y C RVF
Sbjct: 106 DYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVF 165
Query: 196 EEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALG 255
E++P+ NVV+W ++I+GF R +E F M+ + +K N LL AC +
Sbjct: 166 EDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIV 225
Query: 256 YGRGAHCQIIQMGFHSYLH--------VDNALIAMYSKCGVIDDALYIFENMVGRDVVTW 307
G+ H + +GF Y + +LI MY+KCG + A Y+F+ M R +V+W
Sbjct: 226 TGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSW 285
Query: 308 NSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE 367
NS+I GY+Q+G A+EA+ +F +M+ G+ PD VT+LS++ + G + GQ + +
Sbjct: 286 NSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSK 345
Query: 368 HGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIE 427
G +V++ + G A+ E++ + + W ++ HG+ G E
Sbjct: 346 TGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEK-KDTIAWTVVIIGLASHGH---GNE 401
Query: 428 AAESRLLLEPGCSAT---LQQLANLYAS--VGWWNQVARVRKLMKD-KGLKPNPG--SSW 479
A ++ +AT + L LYA +G + R M+D GL+P
Sbjct: 402 ALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCM 461
Query: 480 IEVKSKVHRFEAQDKSNRRM 499
+++ S+ RFE ++ + M
Sbjct: 462 VDILSRAGRFEEAERLVKTM 481
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 132/289 (45%), Gaps = 15/289 (5%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGD---AYRVFEEMPE 200
+ +C S +LN Q H L I + I NV S LI + C + + A VFE +
Sbjct: 13 LENCRSLVELN---QLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDC 69
Query: 201 RNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGA 260
+V W ++I G++ D L + M P+YFT+ +L AC G + +G
Sbjct: 70 PSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCV 129
Query: 261 HCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLA 320
H +++ GF ++V L+ MY CG ++ L +FE++ +VV W S+I+G+ +
Sbjct: 130 HGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRF 189
Query: 321 QEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHY--- 377
+AI F EM GV + + LL +C + G+ + + G P
Sbjct: 190 SDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGF 249
Query: 378 -----SCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGN 421
+ ++D+ + G +R AR + MP V W S+++ +G+
Sbjct: 250 NVILATSLIDMYAKCGDLRTARYLFDGMPE-RTLVSWNSIITGYSQNGD 297
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 147/432 (34%), Positives = 217/432 (50%), Gaps = 39/432 (9%)
Query: 86 SASDIENRR-SHLRLIEDMLENSVINHVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAV 144
S SD NR SH++ ++ N++I L++ + SS+ + + D + +
Sbjct: 50 SNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLL 109
Query: 145 SSCGSKRDLNGGVQYHCLAITTGF--IANVYVGSSLISLYSRCALSGDAYRVFEEMPERN 202
SC S DL G H I TGF + + +G ++ LY+ GDA +VF+EM ERN
Sbjct: 110 KSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIG--VVELYTSGGRMGDAQKVFDEMSERN 167
Query: 203 VVSWTAIIAGFAQEWRVDMCLELFHLM-------------------RGSE---------- 233
VV W +I GF V+ L LF M R E
Sbjct: 168 VVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMID 227
Query: 234 --MKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMG-FHSYLHVDNALIAMYSKCGVID 290
P+ T ++L G L G+ H G F ++ V NAL+ Y K G ++
Sbjct: 228 QGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLE 287
Query: 291 DALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQG-VDPDAVTYLSLLSSC 349
A IF M R+VV+WN++I+G A +G + I LF+ MI++G V P+ T+L +L+ C
Sbjct: 288 AATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACC 347
Query: 350 RHGGLVKEGQVYFNSMVEH-GVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVI 408
+ G V+ G+ F M+E ++ + +HY +VDL+ R+G I EA F++NMPV NA +
Sbjct: 348 SYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAM 407
Query: 409 WGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKD 468
WGSLLS+ R HG+V + AA + +EPG S L+NLYA G W V +VR LMK
Sbjct: 408 WGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKK 467
Query: 469 KGLKPNPGSSWI 480
L+ + G S I
Sbjct: 468 NRLRKSTGQSTI 479
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 139/320 (43%), Gaps = 34/320 (10%)
Query: 178 LISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPN 237
IS+ + S A RVF + NV+ + A+I ++ L F M+ + +
Sbjct: 42 FISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWAD 101
Query: 238 YFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFE 297
+TY LL +C L +G+ H ++I+ GFH + ++ +Y+ G + DA +F+
Sbjct: 102 EYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFD 161
Query: 298 NMVGRDVVTWNSMIAGY-------------------------------AQHGLAQEAISL 326
M R+VV WN MI G+ ++ G +EA+ L
Sbjct: 162 EMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALEL 221
Query: 327 FEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGV-QPKLDHYSCIVDLLG 385
F EMI QG DPD T +++L G++ G+ ++ G+ + + + +VD
Sbjct: 222 FCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYC 281
Query: 386 RAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQ 445
++G + A M N V W +L+S S ++G GI+ ++ ++ E +
Sbjct: 282 KSGDLEAATAIFRKMQR-RNVVSWNTLISGSAVNGKGEFGIDLFDA-MIEEGKVAPNEAT 339
Query: 446 LANLYASVGWWNQVARVRKL 465
+ A + QV R +L
Sbjct: 340 FLGVLACCSYTGQVERGEEL 359
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 212 bits (539), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 125/353 (35%), Positives = 196/353 (55%), Gaps = 7/353 (1%)
Query: 167 GFIANVYVGSSLISLYSRCALSGDAYRVFEEMPER----NVVSWTAIIAGFAQEWRVDMC 222
G + +SL S Y+ A V +M E+ NVVSWTAI +G ++
Sbjct: 321 GIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNA 380
Query: 223 LELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAM 282
L++F M+ + PN T ++LL L G+ H ++ +V AL+ M
Sbjct: 381 LKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDM 440
Query: 283 YSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTY 342
Y K G + A+ IF + + + +WN M+ GYA G +E I+ F M++ G++PDA+T+
Sbjct: 441 YGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITF 500
Query: 343 LSLLSSCRHGGLVKEGQVYFNSM-VEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMP 401
S+LS C++ GLV+EG YF+ M +G+ P ++H SC+VDLLGR+G + EA DFI+ M
Sbjct: 501 TSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMS 560
Query: 402 VCPNAVIWGSLLSSSRLHGNVWIGIEAAESRL-LLEPGCSATLQQLANLYASVGWWNQVA 460
+ P+A IWG+ LSS ++H ++ + E A RL +LEP SA + NLY+++ W V
Sbjct: 561 LKPDATIWGAFLSSCKIHRDLELA-EIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVE 619
Query: 461 RVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSLVDHM 513
R+R LM++ ++ SWI++ VH F A+ K++ DI + LV M
Sbjct: 620 RIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEM 672
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 159/357 (44%), Gaps = 40/357 (11%)
Query: 156 GVQYHCLAITTGFI-ANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFA 214
G+ H I G ++ V S+ + Y RC G A ++F+EMP+R+ ++W I+
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 215 QEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLH 274
+ + +ELF M+ S K T LL C GR H ++++G S +
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVS 125
Query: 275 VDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQG 334
+ N+LI MYS+ G ++ + +F +M R++ +WNS+++ Y + G +AI L +EM G
Sbjct: 126 MCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICG 185
Query: 335 VDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYS---------------- 378
+ PD VT+ SLLS GL K+ M G++P S
Sbjct: 186 LKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGK 245
Query: 379 -------------------CIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLH 419
++D+ + G + AR + +M N V W SL+S +
Sbjct: 246 AIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYAR-MVFDMMDAKNIVAWNSLVSGLS-Y 303
Query: 420 GNVWIGIEAAESRLLLE--PGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPN 474
+ EA R+ E + T LA+ YA++G + V MK+KG+ PN
Sbjct: 304 ACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPN 360
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 133/305 (43%), Gaps = 38/305 (12%)
Query: 147 CGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSW 206
C +K G Q H + G +NV + +SLI +YSR + +VF M +RN+ SW
Sbjct: 99 CSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSW 158
Query: 207 TAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLS-------------------- 246
+I++ + + VD + L M +KP+ T+ SLLS
Sbjct: 159 NSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQI 218
Query: 247 ---------------ACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDD 291
A G L G+ H I++ ++V+ LI MY K G +
Sbjct: 219 AGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPY 278
Query: 292 ALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRH 351
A +F+ M +++V WNS+++G + L ++A +L M K+G+ PDA+T+ SL S
Sbjct: 279 ARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYAT 338
Query: 352 GGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMP---VCPNAVI 408
G ++ M E GV P + ++ I + G R A M V PNA
Sbjct: 339 LGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAAT 398
Query: 409 WGSLL 413
+LL
Sbjct: 399 MSTLL 403
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 95/221 (42%), Gaps = 33/221 (14%)
Query: 130 EQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSG 189
E+ +G + +S + G L+ G + H + I + YV ++L+ +Y +
Sbjct: 389 EEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQ 448
Query: 190 DAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACM 249
A +F + +++ SW ++ G+A R + + F +M + M+P+ T+TS+LS C
Sbjct: 449 SAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCK 508
Query: 250 GSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNS 309
SG ++Q G+ Y + M S+ G+I + +
Sbjct: 509 NSG-----------LVQEGW-KYFDL------MRSRYGIIPTIEHC------------SC 538
Query: 310 MIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCR 350
M+ + G EA + M + PDA + + LSSC+
Sbjct: 539 MVDLLGRSGYLDEAWDFIQTM---SLKPDATIWGAFLSSCK 576
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 97/224 (43%), Gaps = 5/224 (2%)
Query: 257 GRGAHCQIIQMGF-HSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYA 315
G H +I+ G +S V +A + Y +C + A +F+ M RD + WN ++
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 316 QHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLD 375
+ G ++A+ LF EM G T + LL C + EG+ ++ G++ +
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVS 125
Query: 376 HYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNV--WIGIEAAESRL 433
+ ++ + R G + +R +M N W S+LSS G V IG+
Sbjct: 126 MCNSLIVMYSRNGKLELSRKVFNSMKD-RNLSSWNSILSSYTKLGYVDDAIGLLDEMEIC 184
Query: 434 LLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGS 477
L+P T L + YAS G V K M+ GLKP+ S
Sbjct: 185 GLKPDI-VTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSS 227
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 211 bits (538), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 118/306 (38%), Positives = 179/306 (58%), Gaps = 3/306 (0%)
Query: 178 LISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPN 237
++S Y+ A FE+ PE++ VSW +IIA + + ++LF M KP+
Sbjct: 349 MVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPD 408
Query: 238 YFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFE 297
T TSLLSA G L G H QI+ + V NALI MYS+CG I ++ IF+
Sbjct: 409 PHTLTSLLSASTGLVNLRLGMQMH-QIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFD 467
Query: 298 NM-VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVK 356
M + R+V+TWN+MI GYA HG A EA++LF M G+ P +T++S+L++C H GLV
Sbjct: 468 EMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVD 527
Query: 357 EGQVYFNSMVE-HGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSS 415
E + F SM+ + ++P+++HYS +V++ G EA I +MP P+ +WG+LL +
Sbjct: 528 EAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDA 587
Query: 416 SRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNP 475
R++ NV + AAE+ LEP S L N+YA +G W++ ++VR M+ K +K
Sbjct: 588 CRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKER 647
Query: 476 GSSWIE 481
GSSW++
Sbjct: 648 GSSWVD 653
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 119/285 (41%), Gaps = 51/285 (17%)
Query: 138 CFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEE 197
C CG D +GG F NV +S+I Y + A +F++
Sbjct: 256 CLFDQIPDLCG---DDHGG------EFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQ 306
Query: 198 MPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYG 257
M +R+ +SW +I G+ R++ LF SEM PN
Sbjct: 307 MKDRDTISWNTMIDGYVHVSRMEDAFALF-----SEM-PN-------------------- 340
Query: 258 RGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQH 317
R AH N +++ Y+ G ++ A + FE + V+WNS+IA Y ++
Sbjct: 341 RDAHSW-------------NMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKN 387
Query: 318 GLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVK-EGQVYFNSMVEHGVQPKLDH 376
+EA+ LF M +G PD T SLLS+ GLV + + +V V P +
Sbjct: 388 KDYKEAVDLFIRMNIEGEKPDPHTLTSLLSAST--GLVNLRLGMQMHQIVVKTVIPDVPV 445
Query: 377 YSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGN 421
++ ++ + R G I E+R + M + + W +++ HGN
Sbjct: 446 HNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGN 490
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 128/300 (42%), Gaps = 57/300 (19%)
Query: 176 SSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLM------ 229
+++IS Y++ G+A +FE+MPERN VSW+A+I GF Q VD + LF M
Sbjct: 140 NTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSS 199
Query: 230 -------------RGSEMKPNYFTYTSLLSA-----------CMGSGALGYGRGAHCQII 265
R SE Y SL+S +G G G A C
Sbjct: 200 PLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFD 259
Query: 266 QMG--------------FHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMI 311
Q+ F + N++I Y K G + A +F+ M RD ++WN+MI
Sbjct: 260 QIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMI 319
Query: 312 AGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE-HGV 370
GY ++A +LF EM + DA ++ ++S G V+ + YF E H V
Sbjct: 320 DGYVHVSRMEDAFALFSEMPNR----DAHSWNMMVSGYASVGNVELARHYFEKTPEKHTV 375
Query: 371 QPKLDHYSCIVDLLGRAGLIREARDFIENMPV---CPNAVIWGSLLSSSRLHGNVWIGIE 427
++ I+ + +EA D M + P+ SLLS+S N+ +G++
Sbjct: 376 S-----WNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQ 430
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 119/253 (47%), Gaps = 21/253 (8%)
Query: 184 RCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTS 243
R +A +FE++ RN V+W +I+G+ + ++ +LF +M K + T+ +
Sbjct: 52 RSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMP----KRDVVTWNT 107
Query: 244 LLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRD 303
++S + G + + A +M N +I+ Y+K I +AL +FE M R+
Sbjct: 108 MISGYVSCGGIRFLEEARKLFDEMPSRDSFSW-NTMISGYAKNRRIGEALLLFEKMPERN 166
Query: 304 VVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCR----------HGG 353
V+W++MI G+ Q+G A+ LF +M + P L+ + R +G
Sbjct: 167 AVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGS 226
Query: 354 LV--KEGQVY-FNSM-VEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIW 409
LV +E VY +N++ V +G + +++ C+ D + +F E C N V W
Sbjct: 227 LVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERF--CKNVVSW 284
Query: 410 GSLLSSSRLHGNV 422
S++ + G+V
Sbjct: 285 NSMIKAYLKVGDV 297
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 104/209 (49%), Gaps = 7/209 (3%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP 199
L+ +S+ +L G+Q H + + T I +V V ++LI++YSRC ++ R+F+EM
Sbjct: 412 LTSLLSASTGLVNLRLGMQMHQIVVKT-VIPDVPVHNALITMYSRCGEIMESRRIFDEMK 470
Query: 200 -ERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGR 258
+R V++W A+I G+A L LF M+ + + P++ T+ S+L+AC +G + +
Sbjct: 471 LKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAK 530
Query: 259 GAHCQIIQM-GFHSYLHVDNALIAMYSKCGVIDDALYIFENM-VGRDVVTWNSMIAG--- 313
++ + + ++L+ + S G ++A+YI +M D W +++
Sbjct: 531 AQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRI 590
Query: 314 YAQHGLAQEAISLFEEMIKQGVDPDAVTY 342
Y GLA A + + P + Y
Sbjct: 591 YNNVGLAHVAAEAMSRLEPESSTPYVLLY 619
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 14/154 (9%)
Query: 277 NALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHG---LAQEAISLFEEMIKQ 333
N +I+ Y K ++ A +F+ M RDVVTWN+MI+GY G +EA LF+EM +
Sbjct: 75 NTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSR 134
Query: 334 GVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREA 393
D+ ++ +++S + E + F M E +S ++ + G + A
Sbjct: 135 ----DSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVS----WSAMITGFCQNGEVDSA 186
Query: 394 RDFIENMPV---CPNAVIWGSLLSSSRLHGNVWI 424
MPV P + L+ + RL W+
Sbjct: 187 VVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWV 220
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 211 bits (537), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 114/327 (34%), Positives = 178/327 (54%), Gaps = 3/327 (0%)
Query: 156 GVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQ 215
G Q H + + ++ V ++L+++Y++ DA FE M RNVVSW A+I GFAQ
Sbjct: 260 GKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQ 319
Query: 216 EWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHV 275
+ LF M ++P+ T+ S+LS+C A+ + + + G +L V
Sbjct: 320 NGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSV 379
Query: 276 DNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGV 335
N+LI+ YS+ G + +AL F ++ D+V+W S+I A HG A+E++ +FE M+ Q +
Sbjct: 380 ANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESML-QKL 438
Query: 336 DPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE-HGVQPKLDHYSCIVDLLGRAGLIREAR 394
PD +T+L +LS+C HGGLV+EG F M E + ++ + +HY+C++DLLGRAG I EA
Sbjct: 439 QPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEAS 498
Query: 395 DFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVG 454
D + +MP P+ + +H A+ L +EP L+N Y S G
Sbjct: 499 DVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEG 558
Query: 455 WWNQVARVRKLMKDKGLKP-NPGSSWI 480
WNQ A +RK + P PG SW+
Sbjct: 559 HWNQAALLRKRERRNCYNPKTPGCSWL 585
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 172/327 (52%), Gaps = 10/327 (3%)
Query: 125 MSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSR 184
+S ++ ++ +D + C ++ G+Q HCL + G ++ + +SL+ Y +
Sbjct: 130 LSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGK 189
Query: 185 CALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSE---MKPNYFTY 241
C L +A RVFE + +R++V W A+++ + +D L LM GS+ + +YFT+
Sbjct: 190 CGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLM-GSDKNRFRGDYFTF 248
Query: 242 TSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVG 301
+SLLSAC + G+ H + ++ + + V AL+ MY+K + DA FE+MV
Sbjct: 249 SSLLSAC----RIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVV 304
Query: 302 RDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVY 361
R+VV+WN+MI G+AQ+G +EA+ LF +M+ + + PD +T+ S+LSSC + E +
Sbjct: 305 RNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQV 364
Query: 362 FNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGN 421
+ + G L + ++ R G + EA ++ P+ V W S++ + HG
Sbjct: 365 QAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIRE-PDLVSWTSVIGALASHGF 423
Query: 422 VWIGIEAAESRLL-LEPGCSATLQQLA 447
++ ES L L+P L+ L+
Sbjct: 424 AEESLQMFESMLQKLQPDKITFLEVLS 450
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 133/263 (50%), Gaps = 12/263 (4%)
Query: 158 QYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQE- 216
Q H + G ++++ + L+ Y++ DA ++F+EMP RN+V+W +I G Q
Sbjct: 57 QEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRD 116
Query: 217 ----WRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSY 272
R + + +++ ++ ++ L+ C S + G HC +++ G S
Sbjct: 117 GDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESS 176
Query: 273 LHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEM-- 330
+L+ Y KCG+I +A +FE ++ RD+V WN++++ Y +G+ EA L + M
Sbjct: 177 CFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGS 236
Query: 331 IKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLI 390
K D T+ SLLS+CR +++G+ + + Q + + ++++ ++ +
Sbjct: 237 DKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHL 292
Query: 391 REARDFIENMPVCPNAVIWGSLL 413
+AR+ E+M V N V W +++
Sbjct: 293 SDARECFESM-VVRNVVSWNAMI 314
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/315 (35%), Positives = 186/315 (59%), Gaps = 9/315 (2%)
Query: 171 NVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRV-DMCLELFHLM 229
NV +S+IS Y DA +F +++V + A++ GF++ ++++ M
Sbjct: 205 NVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISM 264
Query: 230 RGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVI 289
+ + PN T+ S++ AC + G+ H QI++ G ++++ + ++L+ MY+KCG I
Sbjct: 265 QRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGI 324
Query: 290 DDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSC 349
+DA +F+ M ++V +W SMI GY ++G +EA+ LF M + ++P+ VT+L LS+C
Sbjct: 325 NDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSAC 384
Query: 350 RHGGLVKEGQVYFNSMV-EHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVI 408
H GLV +G F SM ++ ++PK++HY+CIVDL+GRAG + +A +F MP P++ I
Sbjct: 385 SHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDI 444
Query: 409 WGSLLSSSRLHGNVWIGIEAAESRLLL----EPGCSATLQQLANLYASVGWWNQVARVRK 464
W +LLSS LHGNV + AA L PG L+N+YAS W+ V+++R+
Sbjct: 445 WAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLA---LSNVYASNDKWDNVSKIRE 501
Query: 465 LMKDKGLKPNPGSSW 479
+MK + + G SW
Sbjct: 502 VMKRRRISKTIGRSW 516
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 124/261 (47%), Gaps = 5/261 (1%)
Query: 89 DIENRRSHLRLIEDMLENSVINHVGSNLATLKTTTEMSSVMEQE-LGVDVCFLSHAVSSC 147
D E + ++ + ++ N+++ + T K + +M M++ ++ + + +C
Sbjct: 224 DAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGAC 283
Query: 148 GSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWT 207
G Q H + +G ++ +GSSL+ +Y++C DA RVF++M E+NV SWT
Sbjct: 284 SVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWT 343
Query: 208 AIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQM 267
++I G+ + + LELF M+ ++PNY T+ LSAC SG + G + +Q
Sbjct: 344 SMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIF-ESMQR 402
Query: 268 GFHSYLHVDN--ALIAMYSKCGVIDDALYIFENMVGR-DVVTWNSMIAGYAQHGLAQEAI 324
+ +++ ++ + + G ++ A M R D W ++++ HG + A
Sbjct: 403 DYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELAS 462
Query: 325 SLFEEMIKQGVDPDAVTYLSL 345
E+ K D YL+L
Sbjct: 463 IAASELFKLNADKRPGAYLAL 483
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 130/311 (41%), Gaps = 38/311 (12%)
Query: 154 NGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGF 213
G + H I TGF ++ + L+ L+ +C A +VF+E+P+ + ++ +I+G+
Sbjct: 51 KAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGY 110
Query: 214 AQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGAL-----GYGRGAHCQIIQMG 268
+ V L L M S K + +T + +L A G+ R H +II+
Sbjct: 111 LKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCD 170
Query: 269 FHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFE 328
+ AL+ Y K G ++ A +FE M +VV SMI+GY G ++A +F
Sbjct: 171 VELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFN 230
Query: 329 ---------------------EMIKQGVD-----------PDAVTYLSLLSSCRHGGLVK 356
E K+ VD P+ T+ S++ +C +
Sbjct: 231 TTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHE 290
Query: 357 EGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSS 416
GQ +++ GV + S ++D+ + G I +AR + M N W S++
Sbjct: 291 VGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQE-KNVFSWTSMIDGY 349
Query: 417 RLHGNVWIGIE 427
+GN +E
Sbjct: 350 GKNGNPEEALE 360
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 118/341 (34%), Positives = 194/341 (56%), Gaps = 15/341 (4%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP-ERN 202
+ +C D G + I GF + +V +LI+++++C A +F++ E++
Sbjct: 509 LQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKS 568
Query: 203 VVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHC 262
VSW ++ G+ + + + F M+ + +PN T+ +++ A AL G H
Sbjct: 569 TVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHS 628
Query: 263 QIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQE 322
+IQ GF S V N+L+ MY+KCG+I+ + F + + +V+WN+M++ YA HGLA
Sbjct: 629 SLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASC 688
Query: 323 AISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE-HGVQPKLDHYSCIV 381
A+SLF M + + PD+V++LS+LS+CRH GLV+EG+ F M E H ++ +++HY+C+V
Sbjct: 689 AVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMV 748
Query: 382 DLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSA 441
DLLG+AGL EA + + M V + +WG+LL+SSR+H N+W+ A + LEP +
Sbjct: 749 DLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPS 808
Query: 442 TLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEV 482
Q L G N V+R++K+ P SWIEV
Sbjct: 809 HYSQDRRL----GEVNNVSRIKKV---------PACSWIEV 836
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 136/270 (50%)
Query: 152 DLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIA 211
DL G+ H A+ G I +V V +SL+S+YS+C A ++F + +R+VVSW+A+IA
Sbjct: 315 DLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIA 374
Query: 212 GFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHS 271
+ Q + D + LF M +KPN T TS+L C G A G+ HC I+ S
Sbjct: 375 SYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIES 434
Query: 272 YLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMI 331
L A+I+MY+KCG AL FE + +D V +N++ GY Q G A +A +++ M
Sbjct: 435 ELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMK 494
Query: 332 KQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIR 391
GV PD+ T + +L +C G + +++HG + ++++ + +
Sbjct: 495 LHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALA 554
Query: 392 EARDFIENMPVCPNAVIWGSLLSSSRLHGN 421
A + + V W +++ LHG
Sbjct: 555 AAIVLFDKCGFEKSTVSWNIMMNGYLLHGQ 584
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 130/253 (51%), Gaps = 3/253 (1%)
Query: 160 HCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRV 219
H L I GFI S LI +Y CA A VFEE+ ++ SW ++A +A
Sbjct: 224 HGLVIKKGFI--FAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFF 281
Query: 220 DMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNAL 279
+ LELF LMR +++ N S L A G L G H +Q G + V +L
Sbjct: 282 EEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSL 341
Query: 280 IAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDA 339
++MYSKCG ++ A +F N+ RDVV+W++MIA Y Q G EAISLF +M++ + P+A
Sbjct: 342 MSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNA 401
Query: 340 VTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIEN 399
VT S+L C + G+ ++ ++ +L+ + ++ + + G A E
Sbjct: 402 VTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFER 461
Query: 400 MPVCPNAVIWGSL 412
+P+ +AV + +L
Sbjct: 462 LPI-KDAVAFNAL 473
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 142/285 (49%), Gaps = 8/285 (2%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP 199
L+ + C G HC AI + + +++IS+Y++C A + FE +P
Sbjct: 404 LTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLP 463
Query: 200 ERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRG 259
++ V++ A+ G+ Q + +++ M+ + P+ T +L C G
Sbjct: 464 IKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSC 523
Query: 260 AHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM-VGRDVVTWNSMIAGYAQHG 318
+ QII+ GF S HV +ALI M++KC + A+ +F+ + V+WN M+ GY HG
Sbjct: 524 VYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHG 583
Query: 319 LAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYS 378
A+EA++ F +M + P+AVT+++++ + ++ G +S+++ G + +
Sbjct: 584 QAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGN 643
Query: 379 CIVDLLGRAGLIREARD-FIE--NMPVCPNAVIWGSLLSSSRLHG 420
+VD+ + G+I + FIE N + V W ++LS+ HG
Sbjct: 644 SLVDMYAKCGMIESSEKCFIEISNKYI----VSWNTMLSAYAAHG 684
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 138/295 (46%), Gaps = 5/295 (1%)
Query: 129 MEQELGVD--VCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCA 186
M +E G+D + A+ +C D G++ H L G ++VY+G++L+ +Y +
Sbjct: 90 MSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKAR 149
Query: 187 LSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLS 246
A +VF++M ++VV+W +++G AQ L LFH MR + ++ + +L+
Sbjct: 150 DLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIP 209
Query: 247 ACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVT 306
A R H +I+ GF + LI MY C + A +FE + +D +
Sbjct: 210 AVSKLEKSDVCRCLHGLVIKKGF--IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESS 267
Query: 307 WNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMV 366
W +M+A YA +G +E + LF+ M V + V S L + + G + +G + V
Sbjct: 268 WGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAV 327
Query: 367 EHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGN 421
+ G+ + + ++ + + G + A N+ + V W ++++S G
Sbjct: 328 QQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIED-RDVVSWSAMIASYEQAGQ 381
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 100/194 (51%), Gaps = 15/194 (7%)
Query: 180 SLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSE-MKPNY 238
SL+ R LS +F+ + + VV W ++I G+ + L F M + + P+
Sbjct: 44 SLFQRQDLS---RVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDK 100
Query: 239 FTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFEN 298
+++T L AC GS G H I +MG S +++ AL+ MY K + A +F+
Sbjct: 101 YSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDK 160
Query: 299 MVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSS---------- 348
M +DVVTWN+M++G AQ+G + A+ LF +M VD D V+ +L+ +
Sbjct: 161 MHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVC 220
Query: 349 -CRHGGLVKEGQVY 361
C HG ++K+G ++
Sbjct: 221 RCLHGLVIKKGFIF 234
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/325 (36%), Positives = 184/325 (56%), Gaps = 6/325 (1%)
Query: 164 ITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCL 223
I G + + + ++LIS YS+ A +FE +N++SW AII+GF L
Sbjct: 413 IKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGL 472
Query: 224 ELFHLMRGSEMK--PNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIA 281
E F + SE++ P+ +T ++LLS C+ + +L G H +++ G + NALI
Sbjct: 473 ERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALIN 532
Query: 282 MYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQG-VDPDAV 340
MYS+CG I ++L +F M +DVV+WNS+I+ Y++HG + A++ ++ M +G V PDA
Sbjct: 533 MYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAA 592
Query: 341 TYLSLLSSCRHGGLVKEGQVYFNSMVE-HGVQPKLDHYSCIVDLLGRAGLIREARDF--I 397
T+ ++LS+C H GLV+EG FNSMVE HGV +DH+SC+VDLLGRAG + EA I
Sbjct: 593 TFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKI 652
Query: 398 ENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWN 457
+ +W +L S+ HG++ +G A+ + E + QL+N+YA G W
Sbjct: 653 SEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWK 712
Query: 458 QVARVRKLMKDKGLKPNPGSSWIEV 482
+ R+ + G G SW+ +
Sbjct: 713 EAEETRRAINMIGAMKQRGCSWMRL 737
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 142/277 (51%), Gaps = 10/277 (3%)
Query: 153 LNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEE--MPERNVVSWTAII 210
L+ G Q H L I GF V ++LI++Y C + DA VFEE + R+ V++ +I
Sbjct: 205 LDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVI 264
Query: 211 AGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFH 270
G A ++ D L +F M + ++P T+ S++ +C G H I+ G+
Sbjct: 265 DGLAG-FKRDESLLVFRKMLEASLRPTDLTFVSVMGSC---SCAAMGHQVHGLAIKTGYE 320
Query: 271 SYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEM 330
Y V NA + MYS A +FE++ +D+VTWN+MI+ Y Q L + A+S+++ M
Sbjct: 321 KYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRM 380
Query: 331 IKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLI 390
GV PD T+ SLL++ +++ Q +++ G+ K++ + ++ + G I
Sbjct: 381 HIIGVKPDEFTFGSLLATSLDLDVLEMVQA---CIIKFGLSSKIEISNALISAYSKNGQI 437
Query: 391 REARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIE 427
+A D + + N + W +++S +G + G+E
Sbjct: 438 EKA-DLLFERSLRKNLISWNAIISGFYHNGFPFEGLE 473
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 138/267 (51%), Gaps = 6/267 (2%)
Query: 156 GVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQ 215
G Q H LAI TG+ V ++ +++YS G A++VFE + E+++V+W +I+ + Q
Sbjct: 307 GHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQ 366
Query: 216 EWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHV 275
+ ++ M +KP+ FT+ SLL+ + L + II+ G S + +
Sbjct: 367 AKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQAC---IIKFGLSSKIEI 423
Query: 276 DNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGV 335
NALI+ YSK G I+ A +FE + +++++WN++I+G+ +G E + F +++ V
Sbjct: 424 SNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEV 483
Query: 336 D--PDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREA 393
PDA T +LLS C + G ++ HG + + ++++ + G I+ +
Sbjct: 484 RILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNS 543
Query: 394 RDFIENMPVCPNAVIWGSLLSSSRLHG 420
+ M + V W SL+S+ HG
Sbjct: 544 LEVFNQMSE-KDVVSWNSLISAYSRHG 569
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 160/342 (46%), Gaps = 67/342 (19%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCA------------- 186
+S A+++ RD G Q HC AI +G + + +V ++L+SLY R
Sbjct: 60 VSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEID 119
Query: 187 ----------LS-----GD---AYRVFEEMPERNVVS-WTAIIAGFAQEWRVDMCLELFH 227
LS GD A+ VF++MPER+ V+ W A+I G + + +ELF
Sbjct: 120 EPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFR 179
Query: 228 LMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCG 287
M ++ + F + ++LS C G+L +G+ H +I+ GF V NALI MY C
Sbjct: 180 EMHKLGVRHDKFGFATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQ 238
Query: 288 VIDDALYIFE--NMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSL 345
V+ DA +FE ++ RD VT+N +I G A E++ +F +M++ + P +T++S+
Sbjct: 239 VVVDACLVFEETDVAVRDQVTFNVVIDGLAGFK-RDESLLVFRKMLEASLRPTDLTFVSV 297
Query: 346 LSSCR--------HGGLVKEG-----------QVYFNSMVEHGVQPK---------LDHY 377
+ SC HG +K G ++S + G K L +
Sbjct: 298 MGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTW 357
Query: 378 SCIVDLLGRAGLIREARDFIENM---PVCPNAVIWGSLLSSS 416
+ ++ +A L + A + M V P+ +GSLL++S
Sbjct: 358 NTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATS 399
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 123/251 (49%), Gaps = 16/251 (6%)
Query: 106 NSVINHVGSNLATLKTTTEMSSVMEQELGV--DVCFLSHAVSSCGSKRDLNGGVQYHCLA 163
N++I+ N + S ++E E+ + D LS +S C S L G Q H
Sbjct: 456 NAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYV 515
Query: 164 ITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCL 223
+ G +G++LI++YS+C ++ VF +M E++VVSW ++I+ +++ + +
Sbjct: 516 LRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAV 575
Query: 224 ELFHLMRGS-EMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYL-HVD--NAL 279
+ M+ ++ P+ T++++LSAC +G + G +++ FH + +VD + L
Sbjct: 576 NTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVE--FHGVIRNVDHFSCL 633
Query: 280 IAMYSKCGVIDDA---LYIFENMVGRDVVTWNSMIAGYAQHG---LAQEAISLFEEMIKQ 333
+ + + G +D+A + I E +G V W ++ + A HG L + L E K+
Sbjct: 634 VDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLME--KE 691
Query: 334 GVDPDAVTYLS 344
DP LS
Sbjct: 692 KDDPSVYVQLS 702
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 33/172 (19%)
Query: 223 LELF-HLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIA 281
L+LF + R + ++P+ ++ + ++ +G HC I+ G + HV N L++
Sbjct: 41 LKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLS 100
Query: 282 MYS-------------------------------KCGVIDDALYIFENMVGR-DVVTWNS 309
+Y K G I+ A +F+ M R DV WN+
Sbjct: 101 LYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNA 160
Query: 310 MIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVY 361
MI G + G + ++ LF EM K GV D + ++LS C +G L QV+
Sbjct: 161 MITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGSLDFGKQVH 212
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 113/305 (37%), Positives = 184/305 (60%), Gaps = 11/305 (3%)
Query: 176 SSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELF-HLMRGSEM 234
++LI+ + + + A VF++ ++++ SW A+I+G+AQ + L LF ++ S++
Sbjct: 375 NALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQV 434
Query: 235 KPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDN---ALIAMYSKCGVIDD 291
KP+ T S+ SA G+L G+ AH + F + DN A+I MY+KCG I+
Sbjct: 435 KPDAITMVSVFSAISSLGSLEEGKRAH---DYLNFSTIPPNDNLTAAIIDMYAKCGSIET 491
Query: 292 ALYIF---ENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSS 348
AL IF +N+ + WN++I G A HG A+ A+ L+ ++ + P+++T++ +LS+
Sbjct: 492 ALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSA 551
Query: 349 CRHGGLVKEGQVYFNSM-VEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAV 407
C H GLV+ G+ YF SM +HG++P + HY C+VDLLG+AG + EA++ I+ MPV + +
Sbjct: 552 CCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVM 611
Query: 408 IWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMK 467
IWG LLS+SR HGNV I AA ++P L+N+YA G W VA VR+ M+
Sbjct: 612 IWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMR 671
Query: 468 DKGLK 472
+ ++
Sbjct: 672 TRDVE 676
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 128/264 (48%), Gaps = 35/264 (13%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEE-- 197
L A+ SC S D+ G Q HC + +G +N Y+ +S++++Y++C L DA VF +
Sbjct: 44 LVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHA 103
Query: 198 -----------------------------MPERNVVSWTAIIAGFAQEWRVDMCLELFHL 228
MPER+ VS+T +I G+AQ + +ELF
Sbjct: 104 KLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFRE 163
Query: 229 MRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGV 288
MR + N T +++SAC G + R I++ + V L+ MY C
Sbjct: 164 MRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLC 223
Query: 289 IDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSS 348
+ DA +F+ M R++VTWN M+ GY++ GL ++A EE+ Q + D V++ +++
Sbjct: 224 LKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQA----EELFDQITEKDIVSWGTMIDG 279
Query: 349 CRHGGLVKEGQVYFNSMVEHGVQP 372
C + E VY+ M+ G++P
Sbjct: 280 CLRKNQLDEALVYYTEMLRCGMKP 303
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 173/412 (41%), Gaps = 75/412 (18%)
Query: 90 IENRR--SHLRLIEDMLENSVINHVGSNLATLKTTTEMSSVME-----QELGV--DVCFL 140
+ +RR L+L + M E S +++ + + + S ME + LG+ + L
Sbjct: 118 VRSRRLWDALKLFDVMPERSCVSYT-TLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTL 176
Query: 141 SHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPE 200
+ +S+C + LAI V+V ++L+ +Y C DA ++F+EMPE
Sbjct: 177 ATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPE 236
Query: 201 R-------------------------------NVVSWTAIIAGFAQEWRVDMCLELFHLM 229
R ++VSW +I G ++ ++D L + M
Sbjct: 237 RNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEM 296
Query: 230 RGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSY----------------- 272
MKP+ LLSA S G H I++ GF Y
Sbjct: 297 LRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDI 356
Query: 273 --------------LHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHG 318
+ NALIA + K G+++ A +F+ +D+ +WN+MI+GYAQ
Sbjct: 357 KLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSL 416
Query: 319 LAQEAISLFEEMIKQG-VDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHY 377
Q A+ LF EMI V PDA+T +S+ S+ G ++EG+ + + + P +
Sbjct: 417 SPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLT 476
Query: 378 SCIVDLLGRAGLIREARDFIENMPVCPNAVI--WGSLLSSSRLHGNVWIGIE 427
+ I+D+ + G I A + ++ I W +++ S HG+ + ++
Sbjct: 477 AAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALD 528
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 208 bits (530), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 125/401 (31%), Positives = 205/401 (51%), Gaps = 32/401 (7%)
Query: 146 SCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVS 205
+CG DL G++ H I ++ + +++I Y++C A +F+EM E++ V+
Sbjct: 243 ACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVT 302
Query: 206 WTAIIAGFAQEWRVDMCLELFHLMRG--------------------------SEM----- 234
+ AII+G+ V + LF M EM
Sbjct: 303 YGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGS 362
Query: 235 KPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALY 294
+PN T +SLL + S L G+ H I+ G + ++V ++I Y+K G + A
Sbjct: 363 RPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQR 422
Query: 295 IFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGL 354
+F+N R ++ W ++I YA HG + A SLF++M G PD VT ++LS+ H G
Sbjct: 423 VFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGD 482
Query: 355 VKEGQVYFNSMV-EHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLL 413
Q F+SM+ ++ ++P ++HY+C+V +L RAG + +A +FI MP+ P A +WG+LL
Sbjct: 483 SDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALL 542
Query: 414 SSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKP 473
+ + + G++ I A + +EP + +ANLY G W + VR MK GLK
Sbjct: 543 NGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKK 602
Query: 474 NPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSLVDHMS 514
PG+SWIE + + F A+D S R ++ +I+ LV+ MS
Sbjct: 603 IPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLVESMS 643
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 151/298 (50%), Gaps = 37/298 (12%)
Query: 158 QYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEW 217
Q H I GF ++V+VG+ +I+ Y++C A +VF+EM ER+VVSW ++I+G++Q
Sbjct: 153 QVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSG 212
Query: 218 RVDMCLELFHLMRG-SEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVD 276
+ C +++ M S+ KPN T S+ AC S L +G H ++I+ L +
Sbjct: 213 SFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLC 272
Query: 277 NALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISL---------- 326
NA+I Y+KCG +D A +F+ M +D VT+ ++I+GY HGL +EA++L
Sbjct: 273 NAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLS 332
Query: 327 ---------------------FEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSM 365
F EMI+ G P+ VT SLL S + +K G+
Sbjct: 333 TWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFA 392
Query: 366 VEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNA--VIWGSLLSSSRLHGN 421
+ +G + + I+D + G + A+ +N C + + W +++++ +HG+
Sbjct: 393 IRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDN---CKDRSLIAWTAIITAYAVHGD 447
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 129/276 (46%), Gaps = 11/276 (3%)
Query: 157 VQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQE 216
+Q H + + ++ S LIS Y+R A VF+E+ RN S+ A++ +
Sbjct: 42 LQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSR 101
Query: 217 WRVDMCLELFHLMRGSE------MKPNYFTYTSLLSACMGSGALGYG---RGAHCQIIQM 267
LF GS +P+ + + +L A G G R H +I+
Sbjct: 102 EMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRG 161
Query: 268 GFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLF 327
GF S + V N +I Y+KC I+ A +F+ M RDVV+WNSMI+GY+Q G ++ ++
Sbjct: 162 GFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMY 221
Query: 328 EEMIK-QGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGR 386
+ M+ P+ VT +S+ +C + G M+E+ +Q L + ++ +
Sbjct: 222 KAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAK 281
Query: 387 AGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNV 422
G + AR + M ++V +G+++S HG V
Sbjct: 282 CGSLDYARALFDEMSE-KDSVTYGAIISGYMAHGLV 316
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 10/180 (5%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP 199
LS + S +L GG + H AI G N+YV +S+I Y++ A RVF+
Sbjct: 369 LSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCK 428
Query: 200 ERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRG 259
+R++++WTAII +A D LF M+ KP+ T T++LSA SG +
Sbjct: 429 DRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQH 488
Query: 260 AHCQI-----IQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM-VGRDVVTWNSMIAG 313
+ I+ G Y ++++ S+ G + DA+ M + W +++ G
Sbjct: 489 IFDSMLTKYDIEPGVEHYA----CMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNG 544
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 208 bits (529), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 140/463 (30%), Positives = 218/463 (47%), Gaps = 51/463 (11%)
Query: 66 RANKELANALRILNLVSPKKSASD--IENRRSHLRLIED---MLENSVIN----HVGSNL 116
+ N AN L + +SP SAS + S R I + N++I H S+L
Sbjct: 38 KQNSVFANVLFAITSISPSASASKEVVSYATSVFRFITNPSTFCFNTIIRICTLHEPSSL 97
Query: 117 ATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKR--DLNGGVQYHCLAITTGFIANVYV 174
++ + EM + + D +C +K+ DL HC A+ G +++++
Sbjct: 98 SSKRFFVEMR---RRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFT 154
Query: 175 GSSLISLYSRCALSGDAYRVFEEMPERNVV------------------------------ 204
++LI +YS A A ++F+E P+R+VV
Sbjct: 155 LNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDL 214
Query: 205 -SWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQ 263
SW ++I+G+AQ ++LF M +KP+ S LSAC SG G+ H
Sbjct: 215 VSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDY 274
Query: 264 IIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEA 323
+ + L+ Y+KCG ID A+ IFE + + TWN+MI G A HG +
Sbjct: 275 TKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELT 334
Query: 324 ISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE-HGVQPKLDHYSCIVD 382
+ F +M+ G+ PD VT++S+L C H GLV E + F+ M + V ++ HY C+ D
Sbjct: 335 VDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMAD 394
Query: 383 LLGRAGLIREARDFIENMPVC----PNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPG 438
LLGRAGLI EA + IE MP + W LL R+HGN+ I +AA L P
Sbjct: 395 LLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPE 454
Query: 439 CSATLQQLANLYASVGWWNQVARVRKLM-KDKGLKPNPGSSWI 480
+ + +YA+ W +V +VR+++ +DK +K N G S +
Sbjct: 455 DGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVKKNVGFSKV 497
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 137/328 (41%), Gaps = 83/328 (25%)
Query: 158 QYHCLAITTGFIANVYVGSSLIS--LYSRCALSGDAYRVFEEMPERNVVSWTAII----- 210
Q+H IT+G I+N + +S+ + L++ ++S A + VVS+ +
Sbjct: 22 QFHAQFITSGRISNDFKQNSVFANVLFAITSISPSAS------ASKEVVSYATSVFRFIT 75
Query: 211 --AGFAQEWRVDMCL----------ELFHLMRGSEMKPNYFTYTSLLSACMG--SGALGY 256
+ F + +C F MR + P++ T+ + AC +G L
Sbjct: 76 NPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTL 135
Query: 257 GRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWN-------- 308
+ HCQ ++ G S L N LI +YS ID AL +F+ RDVVT+N
Sbjct: 136 VKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVK 195
Query: 309 -----------------------SMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSL 345
S+I+GYAQ +EAI LF+EM+ G+ PD V +S
Sbjct: 196 AREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVST 255
Query: 346 LSSCRHGG----------LVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARD 395
LS+C G K +++ +S + G +VD + G I A +
Sbjct: 256 LSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATG----------LVDFYAKCGFIDTAME 305
Query: 396 FIENMPVCPNAVI--WGSLLSSSRLHGN 421
E +C + + W ++++ +HGN
Sbjct: 306 IFE---LCSDKTLFTWNAMITGLAMHGN 330
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 119/353 (33%), Positives = 193/353 (54%), Gaps = 4/353 (1%)
Query: 167 GFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELF 226
GF N+Y SS+I YS +A R+F+ + E+N+V WTA+ G+ + D LEL
Sbjct: 322 GF-GNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELA 380
Query: 227 HLMRGSEMK-PNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSK 285
+E P+ S+L AC + G+ H ++ G + A + MYSK
Sbjct: 381 RAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSK 440
Query: 286 CGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSL 345
CG ++ A IF++ RD V +N+MIAG A HG ++ FE+M + G PD +T+++L
Sbjct: 441 CGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMAL 500
Query: 346 LSSCRHGGLVKEGQVYFNSMVE-HGVQPKLDHYSCIVDLLGRAGLIREARDFIENMP-VC 403
LS+CRH GLV EG+ YF SM+E + + P+ HY+C++DL G+A + +A + +E + V
Sbjct: 501 LSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVE 560
Query: 404 PNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVR 463
+AVI G+ L++ + N + E E L++E + Q+AN YAS G W+++ R+R
Sbjct: 561 KDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIR 620
Query: 464 KLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSLVDHMSSL 516
M+ K L+ G SW + + H F + D S+ I ++ + +S +
Sbjct: 621 HQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAMLHFVTKDLSEI 673
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 119/299 (39%), Gaps = 82/299 (27%)
Query: 153 LNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAG 212
L G +H +I +G + L++LYS+ L +A VF+EM ERNV SW A+IA
Sbjct: 4 LKDGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAA 63
Query: 213 FAQEWRVDMCLELF------------------------------------HLMRGSEMKP 236
+ + V ELF H ++
Sbjct: 64 YVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWI 123
Query: 237 NYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGV-------- 288
+ FT T+++ + YG H +++ G ++LI MYSKCG
Sbjct: 124 DDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIF 183
Query: 289 -------------------------IDDALYIF-ENMVGRDVVTWNSMIAGYAQHGLAQE 322
ID AL +F N D ++WN++IAGYAQ+G +E
Sbjct: 184 NGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEE 243
Query: 323 AISLFEEMIKQGVDPDAVTY---LSLLSSCR--------HGGLVKEGQVYFNSMVEHGV 370
A+ + M + G+ D ++ L++LSS + H ++K G Y N V G+
Sbjct: 244 ALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGS-YSNKFVSSGI 301
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/323 (20%), Positives = 133/323 (41%), Gaps = 49/323 (15%)
Query: 137 VCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFE 196
V L H S CG +++ C+ N ++I+ Y R A VF
Sbjct: 163 VSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARN-----AMIAAYCREGDIDKALSVFW 217
Query: 197 EMPERN-VVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALG 255
PE N +SW +IAG+AQ + L++ M + +K + ++ ++L+ +L
Sbjct: 218 RNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLK 277
Query: 256 YGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDA-----LYIFENMVGRDVVTWNSM 310
G+ H ++++ G +S V + ++ +Y KCG + A LY F N+ + +SM
Sbjct: 278 IGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNL-----YSASSM 332
Query: 311 IAGYAQHGLAQEAISLFEEMIKQGV--------------------------------DPD 338
I GY+ G EA LF+ + ++ + PD
Sbjct: 333 IVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPD 392
Query: 339 AVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIE 398
++ +S+L +C ++ G+ + G+ + VD+ + G + A +
Sbjct: 393 SLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFD 452
Query: 399 NMPVCPNAVIWGSLLSSSRLHGN 421
+ + V++ ++++ HG+
Sbjct: 453 S-SFERDTVMYNAMIAGCAHHGH 474
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 83/185 (44%), Gaps = 16/185 (8%)
Query: 136 DVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVF 195
D + + +C + + G + H ++ TG + + + ++ + +YS+C A R+F
Sbjct: 392 DSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIF 451
Query: 196 EEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALG 255
+ ER+ V + A+IAG A + F M KP+ T+ +LLSAC G +
Sbjct: 452 DSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVL 511
Query: 256 YGRGAHCQII-------QMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWN 308
G +I + G ++ +I +Y K +D A+ + E G D V +
Sbjct: 512 EGEKYFKSMIEAYNISPETGHYT------CMIDLYGKAYRLDKAIELME---GIDQVEKD 562
Query: 309 SMIAG 313
++I G
Sbjct: 563 AVILG 567
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 108/336 (32%), Positives = 189/336 (56%), Gaps = 1/336 (0%)
Query: 158 QYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEW 217
+ H + G A+ + ++ +++Y RC + +FE R+VV W+++I+G+A+
Sbjct: 273 EIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETG 332
Query: 218 RVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDN 277
+ L + MR ++ N T +++SAC S L + H QI++ GF S++ + N
Sbjct: 333 DCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGN 392
Query: 278 ALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDP 337
ALI MY+KCG + A +F + +D+V+W+SMI Y HG EA+ +F+ MIK G +
Sbjct: 393 ALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEV 452
Query: 338 DAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFI 397
D + +L++LS+C H GLV+E Q F ++ + L+HY+C ++LLGR G I +A +
Sbjct: 453 DDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVT 512
Query: 398 ENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLL-EPGCSATLQQLANLYASVGWW 456
NMP+ P+A IW SLLS+ HG + + + + L+ EP A L+ ++ G +
Sbjct: 513 INMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNY 572
Query: 457 NQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQ 492
+ VR++M+ + L G S IE + ++ ++ +
Sbjct: 573 HAAEEVRRVMQRRKLNKCYGFSKIEPELQIEDYQGK 608
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 141/264 (53%), Gaps = 11/264 (4%)
Query: 171 NVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMR 230
+V + ++L+ +Y + A+ VF++M +N VSWTA+I+G +M ++LF M+
Sbjct: 184 SVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQ 243
Query: 231 GSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIA----MYSKC 286
++PN T S+L AC+ L YG +I F H D L A MY +C
Sbjct: 244 RENLRPNRVTLLSVLPACV---ELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRC 300
Query: 287 GVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLL 346
G + + +FE RDVV W+SMI+GYA+ G E ++L +M K+G++ ++VT L+++
Sbjct: 301 GNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIV 360
Query: 347 SSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNA 406
S+C + L+ + +++ G + + ++D+ + G + AR+ + +
Sbjct: 361 SACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTE-KDL 419
Query: 407 VIWGSLLSSSRLHGNVWIGIEAAE 430
V W S++++ LHG+ G EA E
Sbjct: 420 VSWSSMINAYGLHGH---GSEALE 440
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 126/275 (45%), Gaps = 30/275 (10%)
Query: 156 GVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQ 215
G Q HCL + G + V +SLIS+Y++ + +VF+EM R+ VS+ +II Q
Sbjct: 66 GAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQ 125
Query: 216 EWRVDMCLELFHLMRGSEMKPNYFTYTSLLSAC--MGSGALGYGRGAHCQIIQMGFHSYL 273
+ + ++L M P SLL+ C MGS + ++ +M FH+ +
Sbjct: 126 DGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSS---------KVARM-FHALV 175
Query: 274 HVD----------NALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEA 323
VD AL+ MY K A ++F+ M ++ V+W +MI+G + +
Sbjct: 176 LVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMG 235
Query: 324 ISLFEEMIKQGVDPDAVTYLSLLSSCRH----GGLVKEGQVYFNSMVEHGVQPKLDHYSC 379
+ LF M ++ + P+ VT LS+L +C LVKE + HG +
Sbjct: 236 VDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGF---SFRHGCHADERLTAA 292
Query: 380 IVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLS 414
+ + R G + +R E V + V+W S++S
Sbjct: 293 FMTMYCRCGNVSLSRVLFETSKV-RDVVMWSSMIS 326
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 96/206 (46%), Gaps = 4/206 (1%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV 203
VS+C + L+ H + GF++++ +G++LI +Y++C A VF E+ E+++
Sbjct: 360 VSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDL 419
Query: 204 VSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQ 263
VSW+++I + LE+F M + + + ++LSAC +G + + Q
Sbjct: 420 VSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQ 479
Query: 264 IIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGR-DVVTWNSMIAGYAQHGLAQE 322
+ L I + + G IDDA + NM + W+S+++ HG
Sbjct: 480 AGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDV 539
Query: 323 AISLF-EEMIKQGVDPDAVTYLSLLS 347
A + E++K +PD LLS
Sbjct: 540 AGKIIANELMKS--EPDNPANYVLLS 563
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/365 (32%), Positives = 200/365 (54%), Gaps = 3/365 (0%)
Query: 130 EQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSG 189
E E+ D +S VS C R+L+ G Q L I GF++N V + I ++S+C
Sbjct: 228 EMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLD 287
Query: 190 DAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACM 249
D+ ++F E+ + + V ++I ++ + L LF L ++P+ FT++S+LS+ M
Sbjct: 288 DSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSS-M 346
Query: 250 GSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNS 309
+ L +G H +I++GF V +L+ MY K G +D A+ +F G+D++ WN+
Sbjct: 347 NAVMLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNT 406
Query: 310 MIAGYAQHGLAQEAISLFEEMI-KQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE- 367
+I G A++ A E++++F +++ Q + PD VT + +L +C + G V EG F+SM +
Sbjct: 407 VIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKA 466
Query: 368 HGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIE 427
HGV P +HY+CI++LL R G+I EA+D + +P P++ IW +L +S G+ +
Sbjct: 467 HGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAET 526
Query: 428 AAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVH 487
A++ L EP S L +Y W ++R M + LK GSS I ++S V
Sbjct: 527 VAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVF 586
Query: 488 RFEAQ 492
FEA
Sbjct: 587 SFEAD 591
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 105/194 (54%), Gaps = 1/194 (0%)
Query: 156 GVQYHCLAITTGFIA-NVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFA 214
G Q H AI +G N+ V +S++ +Y R + A VF M +R+VVSW +I +
Sbjct: 152 GEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCS 211
Query: 215 QEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLH 274
++ L+ F LMR E++P+ +T + ++S C L G+ A I+MGF S
Sbjct: 212 DSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSI 271
Query: 275 VDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQG 334
V A I M+SKC +DD++ +F + D V NSMI Y+ H ++A+ LF + Q
Sbjct: 272 VLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQS 331
Query: 335 VDPDAVTYLSLLSS 348
V PD T+ S+LSS
Sbjct: 332 VRPDKFTFSSVLSS 345
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 84/161 (52%), Gaps = 4/161 (2%)
Query: 190 DAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACM 249
+A +F+EMPER+VVSW +I+G + + +F M+ E++P FT++ L S
Sbjct: 88 NALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVT 147
Query: 250 GSGALGYGRGAHCQIIQMGFHSY-LHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWN 308
+ +G H I G Y L V N+++ MY + GV D AL +F M RDVV+WN
Sbjct: 148 ---CVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWN 204
Query: 309 SMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSC 349
+I + G + A+ F M + + PD T ++S C
Sbjct: 205 CLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSIC 245
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 89/190 (46%), Gaps = 13/190 (6%)
Query: 236 PNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYI 295
P+ ++ L++ + S + + H Q+++ GF + N + +Y K G + +AL +
Sbjct: 2 PSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQL 61
Query: 296 FENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLV 355
F+++ ++ +TWN + G ++G A+ LF+EM ++ D V++ +++S G
Sbjct: 62 FDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPER----DVVSWNTMISGLVSCGFH 117
Query: 356 KEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCP-----NAVIWG 410
+ G F M ++P +S + L+ +R I +C N V+W
Sbjct: 118 EYGIRVFFDMQRWEIRPTEFTFSILASLV---TCVRHGEQ-IHGNAICSGVSRYNLVVWN 173
Query: 411 SLLSSSRLHG 420
S++ R G
Sbjct: 174 SVMDMYRRLG 183
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 191/331 (57%), Gaps = 8/331 (2%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV 203
+ +CG + G H + GF +VYV ++L+ +Y++C A VF+ +P ++
Sbjct: 202 LKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDY 261
Query: 204 VSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQ 263
VSW +++ G+ + L++F LM + ++P+ +S+L+ + + +GR H
Sbjct: 262 VSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVL---SFKHGRQLHGW 318
Query: 264 IIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEA 323
+I+ G L V NALI +YSK G + A +IF+ M+ RD V+WN++I+ ++++
Sbjct: 319 VIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNS---NG 375
Query: 324 ISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMV-EHGVQPKLDHYSCIVD 382
+ FE+M + PD +T++S+LS C + G+V++G+ F+ M E+G+ PK++HY+C+V+
Sbjct: 376 LKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVN 435
Query: 383 LLGRAGLIREARDFI-ENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSA 441
L GRAG++ EA I + M + +WG+LL + LHGN IG AA+ LEP
Sbjct: 436 LYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEH 495
Query: 442 TLQQLANLYASVGWWNQVARVRKLMKDKGLK 472
+ L +Y+ V RVR++M D+GL+
Sbjct: 496 NFELLIRIYSKAKRAEDVERVRQMMVDRGLE 526
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/425 (27%), Positives = 211/425 (49%), Gaps = 29/425 (6%)
Query: 56 PFSSQKLPPRRANKELANALRILNLVSPKKSASDIENRRSHLRLIEDMLENSVINHVGSN 115
P Q+L R N+ N L+ P + IE + H +E + +SVI
Sbjct: 25 PRHHQQLKQHRQNQYNNNGFTSLSFTKPSPTPLLIEKQSIHRTQLEAL--DSVIT----- 77
Query: 116 LATLKTTTEMS-SVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYV 174
L+T+ + S+ E E+ + + +C S R ++ GV+ H L N+ +
Sbjct: 78 --DLETSAQKGISLTEPEI------FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGI 129
Query: 175 GSSLISLYSRCALSGDAYRVFEEMPERNV--VSWTAIIAGFAQEWRVDMCLELFHLMRGS 232
S L+ LY+ C + A+ VF+ M +R+ +W ++I+G+A+ + + + L+ M
Sbjct: 130 SSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAED 189
Query: 233 EMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDA 292
+KP+ FT+ +L AC G G++ G H +++ GF ++V NAL+ MY+KCG I A
Sbjct: 190 GVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKA 249
Query: 293 LYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHG 352
+F+ + +D V+WNSM+ GY HGL EA+ +F M++ G++PD V S+L+
Sbjct: 250 RNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLS- 308
Query: 353 GLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSL 412
K G+ ++ G++ +L + ++ L + G + +A FI + + + V W ++
Sbjct: 309 --FKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQA-CFIFDQMLERDTVSWNAI 365
Query: 413 LSSSRLHGNVWIGIEAAES--RLLLEPGCSATLQQLANLYASVGWWNQVARVRKLM-KDK 469
+S+ + N G++ E R +P T + +L A+ G R+ LM K+
Sbjct: 366 ISAHSKNSN---GLKYFEQMHRANAKPD-GITFVSVLSLCANTGMVEDGERLFSLMSKEY 421
Query: 470 GLKPN 474
G+ P
Sbjct: 422 GIDPK 426
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 202 bits (513), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 130/381 (34%), Positives = 213/381 (55%), Gaps = 19/381 (4%)
Query: 142 HAVSSCGSKRDLNGGVQYHCLAI-TTGFIANV-YVGSSLISLYSRCALSGDAYRVFEEMP 199
+ + +C L G +HCL I + F ++ V +SLI++YSRC+ A+ VF+++
Sbjct: 325 NGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVE 384
Query: 200 ERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRG 259
++ +W +II+GFA R + L M S PN+ T S+L G L +G+
Sbjct: 385 ANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKE 444
Query: 260 AHCQIIQ-MGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHG 318
HC I++ + L + N+L+ MY+K G I A +F++M RD VT+ S+I GY + G
Sbjct: 445 FHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLG 504
Query: 319 LAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEH--GVQPKLDH 376
+ A++ F++M + G+ PD VT +++LS+C H LV+EG F M EH G++ +L+H
Sbjct: 505 KGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKM-EHVFGIRLRLEH 563
Query: 377 YSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLE 436
YSC+VDL RAG + +ARD +P P++ + +LL + +HGN IG E A +LLLE
Sbjct: 564 YSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIG-EWAADKLLLE 622
Query: 437 --PGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDK 494
P LA++YA G W+++ V+ L+ D G++ + +E S E +
Sbjct: 623 TKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDS-----ELDGE 677
Query: 495 SNRRMSDILLVIDSLVDHMSS 515
+N+ M+D DS+++ S
Sbjct: 678 NNKPMND-----DSVINQEQS 693
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 141/311 (45%), Gaps = 38/311 (12%)
Query: 128 VMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCAL 187
+M + + D + +C + D G H + N+YV ++LIS+Y R
Sbjct: 175 MMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGK 234
Query: 188 SGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSL--- 244
A R+F+ M ER+ VSW AII + E ++ +L M S ++ + T+ ++
Sbjct: 235 VDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGG 294
Query: 245 --------------------------------LSACMGSGALGYGRGAHCQIIQ-MGF-H 270
L AC GAL +G+ HC +I+ F H
Sbjct: 295 CLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSH 354
Query: 271 SYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEM 330
+V N+LI MYS+C + A +F+ + + TWNS+I+G+A + ++E L +EM
Sbjct: 355 DIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEM 414
Query: 331 IKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMV-EHGVQPKLDHYSCIVDLLGRAGL 389
+ G P+ +T S+L G ++ G+ + ++ + L ++ +VD+ ++G
Sbjct: 415 LLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGE 474
Query: 390 IREARDFIENM 400
I A+ ++M
Sbjct: 475 IIAAKRVFDSM 485
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV 203
+S+C + G Q H I++G + + L++ YS L +A + E +
Sbjct: 90 LSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHP 149
Query: 204 VSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQ 263
+ W +I + + R + ++ M ++ + FTY S++ AC YGR H
Sbjct: 150 LPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGS 209
Query: 264 IIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEA 323
I L+V NALI+MY + G +D A +F+ M RD V+WN++I Y EA
Sbjct: 210 IEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEA 269
Query: 324 ISLFEEMIKQGVDPDAVTYLSLLSSCRHGG 353
L + M GV+ VT+ ++ C G
Sbjct: 270 FKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 104/238 (43%), Gaps = 17/238 (7%)
Query: 226 FHLMRGSEMKPNYFTYTS--LLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMY 283
F L+R + Y+S LLS C+G G+ H I G + L+ Y
Sbjct: 69 FSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFY 128
Query: 284 SKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYL 343
S ++D+A I EN + WN +I Y ++ QE++S+++ M+ +G+ D TY
Sbjct: 129 SAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYP 188
Query: 344 SLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVC 403
S++ +C G+V S+ + L + ++ + R G + AR + M
Sbjct: 189 SVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSE- 247
Query: 404 PNAVIWGSLLSSSRLHGNVWIGIEA-AESRLLLEPGCSATLQQLANLYASVGWWNQVA 460
+AV W +++ N + E E+ LL+ L+ + AS+ WN +A
Sbjct: 248 RDAVSWNAII-------NCYTSEEKLGEAFKLLDR------MYLSGVEASIVTWNTIA 292
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 202 bits (513), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 130/381 (34%), Positives = 213/381 (55%), Gaps = 19/381 (4%)
Query: 142 HAVSSCGSKRDLNGGVQYHCLAI-TTGFIANV-YVGSSLISLYSRCALSGDAYRVFEEMP 199
+ + +C L G +HCL I + F ++ V +SLI++YSRC+ A+ VF+++
Sbjct: 325 NGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVE 384
Query: 200 ERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRG 259
++ +W +II+GFA R + L M S PN+ T S+L G L +G+
Sbjct: 385 ANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKE 444
Query: 260 AHCQIIQ-MGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHG 318
HC I++ + L + N+L+ MY+K G I A +F++M RD VT+ S+I GY + G
Sbjct: 445 FHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLG 504
Query: 319 LAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEH--GVQPKLDH 376
+ A++ F++M + G+ PD VT +++LS+C H LV+EG F M EH G++ +L+H
Sbjct: 505 KGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKM-EHVFGIRLRLEH 563
Query: 377 YSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLE 436
YSC+VDL RAG + +ARD +P P++ + +LL + +HGN IG E A +LLLE
Sbjct: 564 YSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIG-EWAADKLLLE 622
Query: 437 --PGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDK 494
P LA++YA G W+++ V+ L+ D G++ + +E S E +
Sbjct: 623 TKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDS-----ELDGE 677
Query: 495 SNRRMSDILLVIDSLVDHMSS 515
+N+ M+D DS+++ S
Sbjct: 678 NNKPMND-----DSVINQEQS 693
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 141/311 (45%), Gaps = 38/311 (12%)
Query: 128 VMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCAL 187
+M + + D + +C + D G H + N+YV ++LIS+Y R
Sbjct: 175 MMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGK 234
Query: 188 SGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSL--- 244
A R+F+ M ER+ VSW AII + E ++ +L M S ++ + T+ ++
Sbjct: 235 VDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGG 294
Query: 245 --------------------------------LSACMGSGALGYGRGAHCQIIQ-MGF-H 270
L AC GAL +G+ HC +I+ F H
Sbjct: 295 CLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSH 354
Query: 271 SYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEM 330
+V N+LI MYS+C + A +F+ + + TWNS+I+G+A + ++E L +EM
Sbjct: 355 DIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEM 414
Query: 331 IKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMV-EHGVQPKLDHYSCIVDLLGRAGL 389
+ G P+ +T S+L G ++ G+ + ++ + L ++ +VD+ ++G
Sbjct: 415 LLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGE 474
Query: 390 IREARDFIENM 400
I A+ ++M
Sbjct: 475 IIAAKRVFDSM 485
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV 203
+S+C + G Q H I++G + + L++ YS L +A + E +
Sbjct: 90 LSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHP 149
Query: 204 VSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQ 263
+ W +I + + R + ++ M ++ + FTY S++ AC YGR H
Sbjct: 150 LPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGS 209
Query: 264 IIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEA 323
I L+V NALI+MY + G +D A +F+ M RD V+WN++I Y EA
Sbjct: 210 IEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEA 269
Query: 324 ISLFEEMIKQGVDPDAVTYLSLLSSCRHGG 353
L + M GV+ VT+ ++ C G
Sbjct: 270 FKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 104/238 (43%), Gaps = 17/238 (7%)
Query: 226 FHLMRGSEMKPNYFTYTS--LLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMY 283
F L+R + Y+S LLS C+G G+ H I G + L+ Y
Sbjct: 69 FSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFY 128
Query: 284 SKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYL 343
S ++D+A I EN + WN +I Y ++ QE++S+++ M+ +G+ D TY
Sbjct: 129 SAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYP 188
Query: 344 SLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVC 403
S++ +C G+V S+ + L + ++ + R G + AR + M
Sbjct: 189 SVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSE- 247
Query: 404 PNAVIWGSLLSSSRLHGNVWIGIEA-AESRLLLEPGCSATLQQLANLYASVGWWNQVA 460
+AV W +++ N + E E+ LL+ L+ + AS+ WN +A
Sbjct: 248 RDAVSWNAII-------NCYTSEEKLGEAFKLLDR------MYLSGVEASIVTWNTIA 292
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 201 bits (512), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 107/299 (35%), Positives = 177/299 (59%), Gaps = 3/299 (1%)
Query: 130 EQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSG 189
+ E+ V+V L +S+ DL+G H L I G ++++ ++LI +Y +
Sbjct: 220 KSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGIS 279
Query: 190 DAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACM 249
A R+F+ ++VV+W +I +A+ ++ C+ L M+ +MKPN T+ LLS+C
Sbjct: 280 SARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCA 339
Query: 250 GSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNS 309
S A GR + + + AL+ MY+K G+++ A+ IF M +DV +W +
Sbjct: 340 YSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTA 399
Query: 310 MIAGYAQHGLAQEAISLFEEMIKQG--VDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE 367
MI+GY HGLA+EA++LF +M ++ V P+ +T+L +L++C HGGLV EG F MVE
Sbjct: 400 MISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVE 459
Query: 368 -HGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIG 425
+ PK++HY C+VDLLGRAG + EA + I N+P+ ++ W +LL++ R++GN +G
Sbjct: 460 AYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLG 518
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 145/278 (52%), Gaps = 2/278 (0%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPER-N 202
+ SC + ++ G H +A+ +GF+ + ++LI Y C DA +VF+EMP+ +
Sbjct: 132 LKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVD 191
Query: 203 VVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHC 262
V+++ ++ G+ Q + + L+LF +MR SE+ N T S LSA G L AH
Sbjct: 192 AVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHV 251
Query: 263 QIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQE 322
I++G LH+ ALI MY K G I A IF+ + +DVVTWN MI YA+ GL +E
Sbjct: 252 LCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEE 311
Query: 323 AISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVD 382
+ L +M + + P++ T++ LLSSC + G+ + + E + + +VD
Sbjct: 312 CVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVD 371
Query: 383 LLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHG 420
+ + GL+ +A + M + W +++S HG
Sbjct: 372 MYAKVGLLEKAVEIFNRMKD-KDVKSWTAMISGYGAHG 408
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 150/368 (40%), Gaps = 53/368 (14%)
Query: 149 SKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTA 208
S RD + H + TG + + S L++ S + A +FE + N+ +
Sbjct: 37 SCRDTVEVSRIHGYMVKTGLDKDDFAVSKLLAFSSVLDIRY-ASSIFEHVSNTNLFMFNT 95
Query: 209 IIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMG 268
+I G++ + +F+ +R + + F++ + L +C + G G H ++ G
Sbjct: 96 MIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSG 155
Query: 269 FHSYLHVDNALIAMYSKCGVIDDALYIFENM-VGRDVVTWNSMIAGYAQHGLAQEAISLF 327
F + + NALI Y CG I DA +F+ M D VT+++++ GY Q A+ LF
Sbjct: 156 FMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLF 215
Query: 328 EEMIKQGVDPDAVTYLSLLSSC------------------------------------RH 351
M K V + T LS LS+ +
Sbjct: 216 RIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKT 275
Query: 352 GGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENM---PVCPNAVI 408
GG+ +++ + ++ + ++C++D + GL+ E + M + PN+
Sbjct: 276 GGISSARRIF-----DCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSST 330
Query: 409 WGSLLSSSRLHGNVWIGIEAA----ESRLLLEPGCSATLQQLANLYASVGWWNQVARVRK 464
+ LLSS ++G A E R+ L+ L ++YA VG + +
Sbjct: 331 FVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTA---LVDMYAKVGLLEKAVEIFN 387
Query: 465 LMKDKGLK 472
MKDK +K
Sbjct: 388 RMKDKDVK 395
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 201 bits (512), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 108/292 (36%), Positives = 167/292 (57%), Gaps = 2/292 (0%)
Query: 178 LISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFH-LMRGSEMKP 236
+IS Y+ L +A VF+ MP R+VVSW A++ +A + LE+F+ ++ S KP
Sbjct: 243 MISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKP 302
Query: 237 NYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIF 296
+ FT S+LSAC G+L G H I + G + AL+ MYSKCG ID AL +F
Sbjct: 303 DGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVF 362
Query: 297 ENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVK 356
RDV TWNS+I+ + HGL ++A+ +F EM+ +G P+ +T++ +LS+C H G++
Sbjct: 363 RATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLD 422
Query: 357 EGQVYFNSMVE-HGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSS 415
+ + F M + V+P ++HY C+VDLLGR G I EA + + +P +++ SLL +
Sbjct: 423 QARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGA 482
Query: 416 SRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMK 467
+ G + A L L S+ Q++NLYAS G W +V R+ M+
Sbjct: 483 CKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMR 534
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 135/292 (46%), Gaps = 44/292 (15%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP 199
+ + +C + G Q H L I +G + +V+V ++L+++Y R A +V + MP
Sbjct: 143 FTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMP 202
Query: 200 ERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRG 259
R+ VSW ++++ + ++ VD LF M
Sbjct: 203 VRDAVSWNSLLSAYLEKGLVDEARALFDEME----------------------------- 233
Query: 260 AHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGL 319
+ S+ N +I+ Y+ G++ +A +F++M RDVV+WN+M+ YA G
Sbjct: 234 ------ERNVESW----NFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGC 283
Query: 320 AQEAISLFEEMIKQGVD-PDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYS 378
E + +F +M+ + PD T +S+LS+C G + +G+ + +HG++ + +
Sbjct: 284 YNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLAT 343
Query: 379 CIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAE 430
+VD+ + G I +A + + W S++S +HG +G +A E
Sbjct: 344 ALVDMYSKCGKIDKALEVFRATSK-RDVSTWNSIISDLSVHG---LGKDALE 391
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 103/211 (48%), Gaps = 7/211 (3%)
Query: 158 QYHCLAITTGFIANVYVGSSLISLYS---RCALSGDAYRVFEEMPERNVVSWTAIIAGFA 214
Q H + TG + + S L++ + A+ + + N + ++I +A
Sbjct: 57 QAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAYA 116
Query: 215 QEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLH 274
++ L +F M + P+ +++T +L AC GR H I+ G + +
Sbjct: 117 NSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVF 176
Query: 275 VDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQG 334
V+N L+ +Y + G + A + + M RD V+WNS+++ Y + GL EA +LF+EM ++
Sbjct: 177 VENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERN 236
Query: 335 VDPDAVTYLSLLSSCRHGGLVKEGQVYFNSM 365
V+ ++ ++S GLVKE + F+SM
Sbjct: 237 VE----SWNFMISGYAAAGLVKEAKEVFDSM 263
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 92/233 (39%), Gaps = 43/233 (18%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP 199
L +S+C S L+ G H G ++ ++L+ +YS+C A VF
Sbjct: 307 LVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATS 366
Query: 200 ERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRG 259
+R+V +W +II+ + LE+F M KPN T+ +LSAC
Sbjct: 367 KRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSAC----------- 415
Query: 260 AHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM-----VGRDVVTWNSMIAGY 314
+ G++D A +FE M V + + M+
Sbjct: 416 ------------------------NHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLL 451
Query: 315 AQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE 367
+ G +EA L E+ D ++ SLL +C+ G +++ + N ++E
Sbjct: 452 GRMGKIEEAEELVNEI---PADEASILLESLLGACKRFGQLEQAERIANRLLE 501
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 83/179 (46%), Gaps = 4/179 (2%)
Query: 240 TYTSLLSACMGSGALGYGRGAHCQIIQMG-FHSYLHVDN--ALIAMYSKCGVIDDALYIF 296
T +LS + +L + AH +++ G FH A A + + A I
Sbjct: 38 TPVPILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSIL 97
Query: 297 ENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVK 356
+ + T NS+I YA + A+++F EM+ V PD ++ +L +C +
Sbjct: 98 NRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFE 157
Query: 357 EGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSS 415
EG+ ++ G+ + + +V++ GR+G AR ++ MPV +AV W SLLS+
Sbjct: 158 EGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPV-RDAVSWNSLLSA 215
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 122/340 (35%), Positives = 186/340 (54%), Gaps = 20/340 (5%)
Query: 160 HCLAITTGFI-ANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFA---- 214
H + GF+ + +G++L+ Y++ A +VF+EMPER V+W A+I G+
Sbjct: 134 HGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKD 193
Query: 215 ---QEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHS 271
R M L GS ++P T +LSA +G L G H I ++GF
Sbjct: 194 KGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTP 253
Query: 272 YLHV--DNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEE 329
+ V AL+ MYSKCG +++A +FE M ++V TW SM G A +G E +L
Sbjct: 254 EVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNR 313
Query: 330 MIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSM-VEHGVQPKLDHYSCIVDLLGRAG 388
M + G+ P+ +T+ SLLS+ RH GLV+EG F SM GV P ++HY CIVDLLG+AG
Sbjct: 314 MAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAG 373
Query: 389 LIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLE--------PGCS 440
I+EA FI MP+ P+A++ SL ++ ++G +G E ++ L +E C
Sbjct: 374 RIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECE 433
Query: 441 ATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWI 480
+ L+N+ A G W +V ++RK MK++ +K PG S++
Sbjct: 434 DYV-ALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 198 bits (504), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 119/337 (35%), Positives = 174/337 (51%), Gaps = 33/337 (9%)
Query: 178 LISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLM-------- 229
LI Y C A F+ MP++N VSW +I+G+ + V ELF LM
Sbjct: 238 LIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVY 297
Query: 230 -------------------------RGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQI 264
R S ++P+ T +S++SA G +G I
Sbjct: 298 DAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYI 357
Query: 265 IQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAI 324
+ G + +LI +Y K G A +F N+ +D V++++MI G +G+A EA
Sbjct: 358 TEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEAN 417
Query: 325 SLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLL 384
SLF MI++ + P+ VT+ LLS+ H GLV+EG FNSM +H ++P DHY +VD+L
Sbjct: 418 SLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDML 477
Query: 385 GRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQ 444
GRAG + EA + I++MP+ PNA +WG+LL +S LH NV G A + LE + L
Sbjct: 478 GRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLS 537
Query: 445 QLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIE 481
LA +Y+SVG W+ VR +K+K L G SW+E
Sbjct: 538 HLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 160/367 (43%), Gaps = 37/367 (10%)
Query: 141 SHAVSS----CGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFE 196
SHAV+S CG ++ G H A+ G VYV + L+ LYSR A + F+
Sbjct: 104 SHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFD 163
Query: 197 EMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSE------MKPNYFTYTSLLSACMG 250
++ E+N VSW +++ G+ + +D +F + + + +Y + +AC
Sbjct: 164 DIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSL 223
Query: 251 SGALGYGRGAHCQIIQMGFHSYLHVDNA-----------------LIAMYSKCGVIDDAL 293
A+ A I+ G+ + + A +I+ Y+K G + A
Sbjct: 224 FSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAE 283
Query: 294 YIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQG--VDPDAVTYLSLLSSCRH 351
+F M +D + +++MIA Y Q+G ++A+ LF +M+++ + PD +T S++S+
Sbjct: 284 ELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQ 343
Query: 352 GGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENM----PVCPNAV 407
G G + + EHG++ + ++DL + G +A N+ V +A+
Sbjct: 344 LGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAM 403
Query: 408 IWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMK 467
I G ++ N E ++ P T L + Y+ G + + MK
Sbjct: 404 IMGCGINGMATEANSLF-TAMIEKKI---PPNVVTFTGLLSAYSHSGLVQEGYKCFNSMK 459
Query: 468 DKGLKPN 474
D L+P+
Sbjct: 460 DHNLEPS 466
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 111/233 (47%), Gaps = 15/233 (6%)
Query: 193 RVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSG 252
R+ + + SW ++ +Q + ++++ M S + P+ TS+L AC
Sbjct: 59 RILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKME 118
Query: 253 ALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIA 312
+ G+ H Q ++ G ++V L+ +YS+ G I+ A F+++ ++ V+WNS++
Sbjct: 119 NMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLH 178
Query: 313 GYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQP 372
GY + G EA +F+++ ++ DAV++ ++SS G + F++M
Sbjct: 179 GYLESGELDEARRVFDKIPEK----DAVSWNLIISSYAKKGDMGNACSLFSAM------- 227
Query: 373 KLDHYSCIVDLLGRAGLIRE---ARDFIENMPVCPNAVIWGSLLSSSRLHGNV 422
L + L+G RE AR + + MP N V W +++S G+V
Sbjct: 228 PLKSPASWNILIGGYVNCREMKLARTYFDAMPQ-KNGVSWITMISGYTKLGDV 279
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 109/271 (40%), Gaps = 38/271 (14%)
Query: 136 DVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVF 195
D LS VS+ + + G G + + +SLI LY + A+++F
Sbjct: 330 DEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMF 389
Query: 196 EEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALG 255
+ +++ VS++A+I G LF M ++ PN T+T LLSA
Sbjct: 390 SNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAY------- 442
Query: 256 YGRGAHCQIIQMGFHSYLHV-DNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGY 314
+H ++Q G+ + + D+ L G++ D M+GR
Sbjct: 443 ----SHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVD-------MLGR------------ 479
Query: 315 AQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPK- 373
G +EA L + M Q P+A + +LL + V+ G++ + V+ P
Sbjct: 480 --AGRLEEAYELIKSMPMQ---PNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTG 534
Query: 374 -LDHYSCIVDLLGRAGLIREARDFIENMPVC 403
L H + I +GR R RD I+ +C
Sbjct: 535 YLSHLAMIYSSVGRWDDARTVRDSIKEKKLC 565
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 111/316 (35%), Positives = 175/316 (55%), Gaps = 12/316 (3%)
Query: 171 NVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMR 230
N +V S ++S Y R +A +F + R++V W +IAG+AQ D ++ F M+
Sbjct: 207 NAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQ 266
Query: 231 GSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVID 290
G +P+ T +S+LSAC SG L GR H I G V NALI MY+KCG ++
Sbjct: 267 GEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLE 326
Query: 291 DALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCR 350
+A +FE++ R V NSMI+ A HG +EA+ +F M + PD +T++++L++C
Sbjct: 327 NATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACV 386
Query: 351 HGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWG 410
HGG + EG F+ M V+P + H+ C++ LLGR+G ++EA ++ M V PN + G
Sbjct: 387 HGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLG 446
Query: 411 SLLSSSRLHGNVWIGIEAAESRL-LLEPGCSAT-------LQQLANLYASVGWWNQVARV 462
+LL + ++H + E AE + ++E S T L ++NLYA W +
Sbjct: 447 ALLGACKVH----MDTEMAEQVMKIIETAGSITNSYSENHLASISNLYAHTERWQTAEAL 502
Query: 463 RKLMKDKGLKPNPGSS 478
R M+ +GL+ +PG S
Sbjct: 503 RVEMEKRGLEKSPGLS 518
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 164/363 (45%), Gaps = 62/363 (17%)
Query: 156 GVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQ 215
G H +I G ++V VGSSLIS+Y +C A +VF+EMPERNV +W A+I G+
Sbjct: 65 GKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMS 124
Query: 216 EWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSY--- 272
+ LF + + N T+ ++ GYG+ + + F
Sbjct: 125 NGDAVLASGLFEEI---SVCRNTVTWIEMIK--------GYGKRIEIEKARELFERMPFE 173
Query: 273 ------------LHVDNA----------------------LIAMYSKCGVIDDALYIFEN 298
++V+N +++ Y + G + +A IF
Sbjct: 174 LKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYR 233
Query: 299 MVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEG 358
+ RD+V WN++IAGYAQ+G + +AI F M +G +PDAVT S+LS+C G + G
Sbjct: 234 VFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVG 293
Query: 359 QVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRL 418
+ + + G++ + ++D+ + G + A E++ V + S++S +
Sbjct: 294 REVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISV-RSVACCNSMISCLAI 352
Query: 419 HGNVWIGIEAAE-----SRLLLEPGCSATLQQLANLYASV--GWWNQVARVRKLMKDKGL 471
HG G EA E L L+P + +A L A V G+ + ++ MK + +
Sbjct: 353 HGK---GKEALEMFSTMESLDLKPD---EITFIAVLTACVHGGFLMEGLKIFSEMKTQDV 406
Query: 472 KPN 474
KPN
Sbjct: 407 KPN 409
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 77/164 (46%)
Query: 136 DVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVF 195
D +S +S+C L+ G + H L G N +V ++LI +Y++C +A VF
Sbjct: 273 DAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVF 332
Query: 196 EEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALG 255
E + R+V ++I+ A + LE+F M ++KP+ T+ ++L+AC+ G L
Sbjct: 333 ESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLM 392
Query: 256 YGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM 299
G ++ + LI + + G + +A + + M
Sbjct: 393 EGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEM 436
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 184/339 (54%), Gaps = 2/339 (0%)
Query: 176 SSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMK 235
+SL+S Y DA +F EM ++ +W+ ++ +A+ + + +F ++ M+
Sbjct: 506 NSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMR 565
Query: 236 PNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYI 295
PN T +LL C +L R H II+ G + + L+ +Y+KCG + A +
Sbjct: 566 PNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGD-IRLKGTLLDVYAKCGSLKHAYSV 624
Query: 296 FENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLV 355
F++ RD+V + +M+AGYA HG +EA+ ++ M + + PD V ++L++C H GL+
Sbjct: 625 FQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLI 684
Query: 356 KEG-QVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLS 414
++G Q+Y + HG++P ++ Y+C VDL+ R G + +A F+ MPV PNA IWG+LL
Sbjct: 685 QDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLR 744
Query: 415 SSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPN 474
+ + + +G A L E + ++N+YA+ W V +R LMK K +K
Sbjct: 745 ACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKP 804
Query: 475 PGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSLVDHM 513
G SW+EV + + F + D S+ R I ++++L M
Sbjct: 805 AGCSWLEVDGQRNVFVSGDCSHPRRDSIFDLVNALYLQM 843
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 119/228 (52%), Gaps = 6/228 (2%)
Query: 147 CGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCA-LSGDAYRVFEEMPERNVVS 205
C D G H I G + VG++L+S+Y++ + DAY F+ + +++VVS
Sbjct: 132 CVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVS 191
Query: 206 WTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSG---ALGYGRGAHC 262
W AIIAGF++ + F LM +PNY T ++L C A GR H
Sbjct: 192 WNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHS 251
Query: 263 QIIQMG-FHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQ 321
++Q +++ V N+L++ Y + G I++A +F M +D+V+WN +IAGYA +
Sbjct: 252 YVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWF 311
Query: 322 EAISLFEEMIKQG-VDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEH 368
+A LF ++ +G V PD+VT +S+L C + G+ + ++ H
Sbjct: 312 KAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRH 359
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 3/219 (1%)
Query: 133 LGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAY 192
G D V +C S DL G H G IA V S++++Y++C D
Sbjct: 17 FGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQ 76
Query: 193 RVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMR-GSEMKPNYFTYTSLLSACMGS 251
++F +M + V W ++ G + + + F M E KP+ T+ +L C+
Sbjct: 77 KMFRQMDSLDPVVWNIVLTGLSVSCGRET-MRFFKAMHFADEPKPSSVTFAIVLPLCVRL 135
Query: 252 GALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVI-DDALYIFENMVGRDVVTWNSM 310
G G+ H II+ G V NAL++MY+K G I DA F+ + +DVV+WN++
Sbjct: 136 GDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAI 195
Query: 311 IAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSC 349
IAG++++ + +A F M+K+ +P+ T ++L C
Sbjct: 196 IAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVC 234
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 153/332 (46%), Gaps = 23/332 (6%)
Query: 156 GVQYHCLAITTGFI-ANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFA 214
G Q H + ++ +V+V +SL+S Y R +A +F M +++VSW +IAG+A
Sbjct: 246 GRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYA 305
Query: 215 QEWRVDMCLELFH-LMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYL 273
+LFH L+ ++ P+ T S+L C L G+ H I++ HSYL
Sbjct: 306 SNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILR---HSYL 362
Query: 274 ----HVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEE 329
V NALI+ Y++ G A + F M +D+++WN+++ +A + ++L
Sbjct: 363 LEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHH 422
Query: 330 MIKQGVDPDAVTYLSLLSSC---RHGGLVKE--GQVYFNSMVEHGVQPKLDHYSCIVDLL 384
++ + + D+VT LSLL C + G VKE G ++ +PKL + ++D
Sbjct: 423 LLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGN--ALLDAY 480
Query: 385 GRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCS--AT 442
+ G + A + V + SLLS G V G L E + T
Sbjct: 481 AKCGNVEYAHKIFLGLSERRTLVSYNSLLS-----GYVNSGSHDDAQMLFTEMSTTDLTT 535
Query: 443 LQQLANLYASVGWWNQVARVRKLMKDKGLKPN 474
+ +YA N+ V + ++ +G++PN
Sbjct: 536 WSLMVRIYAESCCPNEAIGVFREIQARGMRPN 567
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 14/174 (8%)
Query: 164 ITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCL 223
I G + ++ + +L+ +Y++C AY VF+ R++V +TA++AG+A R L
Sbjct: 594 IIRGGLGDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEAL 653
Query: 224 ELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQM-GFHSYLHVDNALIAM 282
++ M S +KP++ T++L+AC +G + G + I + G + + +
Sbjct: 654 MIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDL 713
Query: 283 YSKCGVIDDALYIFENM-----------VGRDVVTWNSMIAGY--AQHGLAQEA 323
++ G +DDA M + R T+N M G+ A H L E+
Sbjct: 714 IARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAES 767
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/307 (37%), Positives = 166/307 (54%), Gaps = 2/307 (0%)
Query: 176 SSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMK 235
+S+I Y++ A +FEE +V +W+A+I G+AQ + + ++F M +K
Sbjct: 242 TSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVK 301
Query: 236 PNYFTYTSLLSACMGSGALGYGRGAHCQIIQ-MGFHSYLHVDNALIAMYSKCGVIDDALY 294
P+ F L+SAC G + Q M S +V ALI M +KCG +D A
Sbjct: 302 PDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAK 361
Query: 295 IFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGL 354
+FE M RD+V++ SM+ G A HG EAI LFE+M+ +G+ PD V + +L C L
Sbjct: 362 LFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRL 421
Query: 355 VKEGQVYFNSM-VEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLL 413
V+EG YF M ++ + DHYSCIV+LL R G ++EA + I++MP +A WGSLL
Sbjct: 422 VEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLL 481
Query: 414 SSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKP 473
LHGN I A LEP + + L+N+YA++ W VA +R M + G+
Sbjct: 482 GGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITK 541
Query: 474 NPGSSWI 480
G SWI
Sbjct: 542 ICGRSWI 548
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 119/312 (38%), Gaps = 84/312 (26%)
Query: 147 CGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSW 206
C + + G H L + GF +V VG+S + Y +C A +VF EMPERN VSW
Sbjct: 120 CSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSW 179
Query: 207 TAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQ 266
TA++ + + ++ +F L M LG
Sbjct: 180 TALVVAYVKSGELEEAKSMFDL--------------------MPERNLGSW--------- 210
Query: 267 MGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIA-------------- 312
NAL+ K G + +A +F+ M RD++++ SMI
Sbjct: 211 ----------NALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDL 260
Query: 313 -----------------GYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGG-- 353
GYAQ+G EA +F EM + V PD + L+S+C G
Sbjct: 261 FEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCF 320
Query: 354 -LVKEGQVYF----NSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVI 408
L ++ Y N H V P L +D+ + G + A E MP + V
Sbjct: 321 ELCEKVDSYLHQRMNKFSSHYVVPAL------IDMNAKCGHMDRAAKLFEEMPQ-RDLVS 373
Query: 409 WGSLLSSSRLHG 420
+ S++ +HG
Sbjct: 374 YCSMMEGMAIHG 385
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 100/208 (48%), Gaps = 13/208 (6%)
Query: 194 VFEEMPERNVVSWTAIIAGFAQEWRV-DMCLELFHLMRGSEMKPNYFTYTSLLSACMGSG 252
VFE +P W +I G++ ++ + L +MR +P+ +T+ ++ C +G
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 253 ALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIA 312
+ G H ++++GF + V + + Y KC + A +F M R+ V+W +++
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 313 GYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQP 372
Y + G +EA S+F+ M ++ + ++ +L+ GLVK G + N+ P
Sbjct: 185 AYVKSGELEEAKSMFDLMPERNLG----SWNALVD-----GLVKSGDL-VNAKKLFDEMP 234
Query: 373 KLD--HYSCIVDLLGRAGLIREARDFIE 398
K D Y+ ++D + G + ARD E
Sbjct: 235 KRDIISYTSMIDGYAKGGDMVSARDLFE 262
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 73/149 (48%), Gaps = 4/149 (2%)
Query: 173 YVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGS 232
YV +LI + ++C A ++FEEMP+R++VS+ +++ G A + LF M
Sbjct: 341 YVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDE 400
Query: 233 EMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVD--NALIAMYSKCGVID 290
+ P+ +T +L C S + G + ++++ + D + ++ + S+ G +
Sbjct: 401 GIVPDEVAFTVILKVCGQSRLVEEGL-RYFELMRKKYSILASPDHYSCIVNLLSRTGKLK 459
Query: 291 DALYIFENM-VGRDVVTWNSMIAGYAQHG 318
+A + ++M W S++ G + HG
Sbjct: 460 EAYELIKSMPFEAHASAWGSLLGGCSLHG 488
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 105/301 (34%), Positives = 166/301 (55%), Gaps = 4/301 (1%)
Query: 191 AYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMG 250
A+++F+EMP++N++SW +I+ + + + LF M + + N T LL+AC
Sbjct: 203 AHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGR 262
Query: 251 SGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSM 310
S L GR H +I+ +S + +D ALI MY KC + A IF+++ R+ VTWN M
Sbjct: 263 SARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVM 322
Query: 311 IAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMV-EHG 369
I + HG + + LFE MI + PD VT++ +L C GLV +GQ Y++ MV E
Sbjct: 323 ILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQ 382
Query: 370 VQPKLDHYSCIVDLLGRAGLIREARDFIENMP---VCPNAVIWGSLLSSSRLHGNVWIGI 426
++P H C+ +L AG EA + ++N+P V P + W +LLSSSR GN +G
Sbjct: 383 IKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGE 442
Query: 427 EAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKV 486
A+S + +P L N+Y+ G W V RVR+++K++ + PG +++K V
Sbjct: 443 SIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIV 502
Query: 487 H 487
H
Sbjct: 503 H 503
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 127/278 (45%), Gaps = 36/278 (12%)
Query: 236 PNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYI 295
P+ +T+ SL+S + + G+ H Q I+ G L V N+L+ MY+ CG +D A +
Sbjct: 116 PDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKL 175
Query: 296 FENMVGRDVVTWNSMIAG-------YAQHGLAQE------------------------AI 324
F + RD+V+WNS+IAG A H L E +I
Sbjct: 176 FVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSI 235
Query: 325 SLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLL 384
SLF EM++ G + T + LL++C +KEG+ S++ + + + ++D+
Sbjct: 236 SLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMY 295
Query: 385 GRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRL--LLEPGCSAT 442
G+ + AR +++ + N V W ++ + LHG G+E E+ + +L P T
Sbjct: 296 GKCKEVGLARRIFDSLSI-RNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPD-EVT 353
Query: 443 LQQLANLYASVGWWNQVARVRKLMKDK-GLKPNPGSSW 479
+ A G +Q LM D+ +KPN G W
Sbjct: 354 FVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQW 391
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 93/224 (41%), Gaps = 30/224 (13%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV 203
+++CG L G H I T ++V + ++LI +Y +C G A R+F+ + RN
Sbjct: 257 LNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNK 316
Query: 204 VSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQ 263
V+W +I R + LELF M ++P+ T+ +L C +G + G+ +
Sbjct: 317 VTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSL 376
Query: 264 IIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEA 323
++ D I N + W M Y+ G +EA
Sbjct: 377 MV-------------------------DEFQIKPNFGHQ----W-CMANLYSSAGFPEEA 406
Query: 324 ISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE 367
+ + + V P++ + +LLSS R G G+ S++E
Sbjct: 407 EEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIE 450
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/407 (28%), Positives = 215/407 (52%), Gaps = 15/407 (3%)
Query: 113 GSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANV 172
G L LK T+M +++ + + L+ AV +CG + Q H I G N
Sbjct: 396 GHGLKALKLFTDM---LQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNP 452
Query: 173 YVGSSLISLYSRCALSGDAYRVFEEMPER--NVVSWTAIIAGFAQEWRVDMCLELFH-LM 229
+ ++L+ + +RC DA +F++ P + + T+II G+A+ D + LFH +
Sbjct: 453 CIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTL 512
Query: 230 RGSEMKPNYFTYTSLLSACMGSGALGY---GRGAHCQIIQMGFHSYLHVDNALIAMYSKC 286
++ + + T +L+ C G LG+ G HC ++ G+ S + + N+LI+MY+KC
Sbjct: 513 CEQKLFLDEVSLTLILAVC---GTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKC 569
Query: 287 GVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLL 346
DDA+ IF M DV++WNS+I+ Y EA++L+ M ++ + PD +T ++
Sbjct: 570 CDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVI 629
Query: 347 SSCRH---GGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVC 403
S+ R+ L ++ + + ++P +HY+ V +LG GL+ EA D I +MPV
Sbjct: 630 SAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQ 689
Query: 404 PNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVR 463
P + +LL S R+H N + A+ L +P + +N+Y++ G+W++ +R
Sbjct: 690 PEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSEMIR 749
Query: 464 KLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSLV 510
+ M+++G + +P SWI ++K+H F A+D S+ + DI ++ L+
Sbjct: 750 EEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDIYRGLEILI 796
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 135/251 (53%), Gaps = 37/251 (14%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSG--DAYRVFEEMPER 201
+++C + G+Q H L + +GF+ +V+V +SL+SLY + + S D ++F+E+P+R
Sbjct: 188 LTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQR 247
Query: 202 NVVSWTAIIAGFAQEWRVDMCLELFHLMRGSE-MKPNYFTYTSLLSACMGSGALGYGRGA 260
+V SW +++ +E + +LF+ M E + FT ++LLS+C S L GR
Sbjct: 248 DVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGREL 307
Query: 261 HCQIIQMGFHSYLHVDNALIAMYSK-------------------------------CGVI 289
H + I++G L V+NALI YSK G++
Sbjct: 308 HGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMV 367
Query: 290 DDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSC 349
D A+ IF N+ ++ +T+N+++AG+ ++G +A+ LF +M+++GV+ +T SL S+
Sbjct: 368 DSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVE---LTDFSLTSAV 424
Query: 350 RHGGLVKEGQV 360
GLV E +V
Sbjct: 425 DACGLVSEKKV 435
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 142/287 (49%), Gaps = 13/287 (4%)
Query: 153 LNGGVQYHCLAITTGFIAN--------VYVGSSLISLYSRCALSGDAYRVFEEMPERNVV 204
L QYH + +T A+ +G++LIS Y + +A VF + VV
Sbjct: 87 LRLSAQYHDVEVTKAVHASFLKLREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVV 146
Query: 205 SWTAIIAGFAQ-EWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQ 263
S+TA+I+GF++ ++ F + + ++PN +T+ ++L+AC+ G H
Sbjct: 147 SYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGL 206
Query: 264 IIQMGFHSYLHVDNALIAMYSK--CGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQ 321
I++ GF + + V N+L+++Y K DD L +F+ + RDV +WN++++ + G +
Sbjct: 207 IVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSH 266
Query: 322 EAISLFEEMIK-QGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCI 380
+A LF EM + +G D+ T +LLSSC ++ G+ + G+ +L + +
Sbjct: 267 KAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNAL 326
Query: 381 VDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIE 427
+ + +++ E M + +AV + ++++ G V +E
Sbjct: 327 IGFYSKFWDMKKVESLYEMM-MAQDAVTFTEMITAYMSFGMVDSAVE 372
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/362 (34%), Positives = 188/362 (51%), Gaps = 10/362 (2%)
Query: 171 NVYVGSSLISLYSRCALSGDAYRVFEEMP-----ERNVVSWTAIIAGFAQEWRVDMCLEL 225
N+ +++IS Y + G+A +F+ M +RN +W IIAG+ Q + D LEL
Sbjct: 452 NIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALEL 511
Query: 226 FHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSK 285
F M+ S PN T SLL AC R H +++ + V NAL Y+K
Sbjct: 512 FRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAK 571
Query: 286 CGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSL 345
G I+ + IF M +D++TWNS+I GY HG A++LF +M QG+ P+ T S+
Sbjct: 572 SGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSI 631
Query: 346 LSSCRHGGLVKEGQVYFNSMV-EHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCP 404
+ + G V EG+ F S+ ++ + P L+H S +V L GRA + EA FI+ M +
Sbjct: 632 ILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQS 691
Query: 405 NAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRK 464
IW S L+ R+HG++ + I AAE+ LEP +AT ++ +YA + K
Sbjct: 692 ETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNK 751
Query: 465 LMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDILLVIDSLVDHMSSLSLQSHMYE 524
+D LK G SWIEV++ +H F D+S + +D+L LV+ MS L +S Y
Sbjct: 752 PRRDNLLKKPLGQSWIEVRNLIHTFTTGDQS-KLCTDVLY---PLVEKMSRLDNRSDQYN 807
Query: 525 EE 526
E
Sbjct: 808 GE 809
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 133/248 (53%), Gaps = 3/248 (1%)
Query: 171 NVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMR 230
+V+V + L+S+Y++C DA +VF+ M ERN+ +W+A+I +++E R +LF LM
Sbjct: 114 DVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMM 173
Query: 231 GSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVID 290
+ P+ F + +L C G + G+ H +I++G S L V N+++A+Y+KCG +D
Sbjct: 174 KDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELD 233
Query: 291 DALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCR 350
A F M RDV+ WNS++ Y Q+G +EA+ L +EM K+G+ P VT+ L+
Sbjct: 234 FATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYN 293
Query: 351 HGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENM---PVCPNAV 407
G M G+ + ++ ++ L G+ +A D M V PNAV
Sbjct: 294 QLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAV 353
Query: 408 IWGSLLSS 415
S +S+
Sbjct: 354 TIMSAVSA 361
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 138/290 (47%), Gaps = 53/290 (18%)
Query: 143 AVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERN 202
AVS+C + +N G + H +A+ GFI +V VG+SL+ +YS+C DA +VF+ + ++
Sbjct: 358 AVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKD 417
Query: 203 VVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHC 262
V +W ++I G+ Q ELF M+ + ++PN T+
Sbjct: 418 VYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITW--------------------- 456
Query: 263 QIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM-----VGRDVVTWNSMIAGYAQH 317
N +I+ Y K G +A+ +F+ M V R+ TWN +IAGY Q+
Sbjct: 457 --------------NTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQN 502
Query: 318 GLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRH---GGLVKE--GQVYFNSM-VEHGVQ 371
G EA+ LF +M P++VT LSLL +C + +V+E G V ++ H V+
Sbjct: 503 GKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVK 562
Query: 372 PKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGN 421
+ + D ++G I +R M + + W SL+ LHG+
Sbjct: 563 ------NALTDTYAKSGDIEYSRTIFLGMET-KDIITWNSLIGGYVLHGS 605
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 108/218 (49%), Gaps = 4/218 (1%)
Query: 202 NVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAH 261
+V +WTA+I+G L++F M + + PN T S +SAC + G H
Sbjct: 316 DVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVH 375
Query: 262 CQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQ 321
++MGF + V N+L+ MYSKCG ++DA +F+++ +DV TWNSMI GY Q G
Sbjct: 376 SIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCG 435
Query: 322 EAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHG-VQPKLDHYSCI 380
+A LF M + P+ +T+ +++S G E F M + G VQ ++ I
Sbjct: 436 KAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLI 495
Query: 381 VDLLGRAGLIREARDFIENMPVC---PNAVIWGSLLSS 415
+ + G EA + M PN+V SLL +
Sbjct: 496 IAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPA 533
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 124/275 (45%), Gaps = 40/275 (14%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV 203
+ C + D+ G H + I G + + V +S++++Y++C A + F M ER+V
Sbjct: 188 LQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDV 247
Query: 204 VSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQ 263
++W +++ + Q + + +EL M + P T+
Sbjct: 248 IAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTW---------------------- 285
Query: 264 IIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM----VGRDVVTWNSMIAGYAQHGL 319
N LI Y++ G D A+ + + M + DV TW +MI+G +G+
Sbjct: 286 -------------NILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGM 332
Query: 320 AQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSC 379
+A+ +F +M GV P+AVT +S +S+C ++ +G + V+ G + +
Sbjct: 333 RYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNS 392
Query: 380 IVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLS 414
+VD+ + G + +AR +++ + W S+++
Sbjct: 393 LVDMYSKCGKLEDARKVFDSVKN-KDVYTWNSMIT 426
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 100/184 (54%), Gaps = 4/184 (2%)
Query: 230 RGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVI 289
+GS++K + TY LL +C+ SG++ GR H + + + V+ L++MY+KCG I
Sbjct: 75 QGSKVKRS--TYLKLLESCIDSGSIHLGRILHAR-FGLFTEPDVFVETKLLSMYAKCGCI 131
Query: 290 DDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSC 349
DA +F++M R++ TW++MI Y++ +E LF M+K GV PD + +L C
Sbjct: 132 ADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGC 191
Query: 350 RHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIW 409
+ G V+ G+V + +++ G+ L + I+ + + G + A F M + + W
Sbjct: 192 ANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRE-RDVIAW 250
Query: 410 GSLL 413
S+L
Sbjct: 251 NSVL 254
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 134/419 (31%), Positives = 211/419 (50%), Gaps = 48/419 (11%)
Query: 99 LIEDMLENSVINHVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQ 158
I ++EN V+N V S ++ E DV F+ +A+++C S +L G Q
Sbjct: 201 FISGLMENGVMNLVPSVFNLMRK-------FSSEEPNDVTFV-NAITACASLLNLQYGRQ 252
Query: 159 YHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPE-RNVVSWTAIIAGFAQEW 217
H L + F VG++LI +YS+C AY VF E+ + RN++SW ++I+G
Sbjct: 253 LHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMING 312
Query: 218 RVDMCLELFHLMRGSEMKPNYFTY-----------------------------------T 242
+ + +ELF + +KP+ T+ T
Sbjct: 313 QHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLT 372
Query: 243 SLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM--V 300
SLLSAC L G+ H +I+ + V +LI MY KCG+ A IF+
Sbjct: 373 SLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPK 432
Query: 301 GRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQV 360
+D V WN MI+GY +HG + AI +FE + ++ V+P T+ ++LS+C H G V++G
Sbjct: 433 PKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQ 492
Query: 361 YFNSMV-EHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLH 419
F M E+G +P +H C++DLLGR+G +REA++ I+ M P++ ++ SLL S R H
Sbjct: 493 IFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSE-PSSSVYSSLLGSCRQH 551
Query: 420 GNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSS 478
+ +G EAA LEP A L+++YA++ W V +R+++ K L PG S
Sbjct: 552 LDPVLGEEAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/342 (31%), Positives = 175/342 (51%), Gaps = 36/342 (10%)
Query: 134 GVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYR 193
G++ ++ + CG D+ GG+Q HCLA+ +GF VYVG+SL+S+YSRC A R
Sbjct: 129 GMNSVTVASVLGGCG---DIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAAR 185
Query: 194 VFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRG-SEMKPNYFTYTSLLSACMGSG 252
+FE++P ++VV++ A I+G + +++ +F+LMR S +PN T+ + ++AC
Sbjct: 186 MFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLL 245
Query: 253 ALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVG-RDVVTWNSMI 311
L YGR H +++ F V ALI MYSKC A +F + R++++WNS+I
Sbjct: 246 NLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVI 305
Query: 312 AGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQ 371
+G +G + A+ LFE++ +G+ PD+ T+ SL+S G V E +F M+ +
Sbjct: 306 SGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMV 365
Query: 372 PKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAES 431
P L C+ LL C + IW +L + +HG+V I+AA
Sbjct: 366 PSL---KCLTSLLS----------------ACSD--IW-TLKNGKEIHGHV---IKAAAE 400
Query: 432 RLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKP 473
R + L L ++Y G + R+ + K P
Sbjct: 401 RDIF------VLTSLIDMYMKCGLSSWARRIFDRFEPKPKDP 436
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 141/298 (47%), Gaps = 24/298 (8%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV 203
+ SC D+ G H + TGF +V+ ++L+S+Y + DA +V +EMPER +
Sbjct: 38 LKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEMPERGI 97
Query: 204 VSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQ 263
S A ++G + +F R S N T S+L C G + G HC
Sbjct: 98 ASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDIEGGMQLHCL 154
Query: 264 IIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEA 323
++ GF ++V +L++MYS+CG A +FE + + VVT+N+ I+G ++G+
Sbjct: 155 AMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLV 214
Query: 324 ISLFEEMIK-QGVDPDAVTYLSLLSSC------RHG----GLVKEGQVYFNSMVEHGVQP 372
S+F M K +P+ VT+++ +++C ++G GLV + + F +MV
Sbjct: 215 PSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVG----- 269
Query: 373 KLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAE 430
+ ++D+ + + A + N + W S++S ++G +E E
Sbjct: 270 -----TALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFE 322
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 7/179 (3%)
Query: 236 PNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYI 295
PN FT+ LL +C G + GR H Q+++ GF + AL++MY K + DAL +
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 296 FENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLV 355
+ M R + + N+ ++G ++G ++A +F + G ++VT S+L C G +
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDI 145
Query: 356 KEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMP----VCPNAVIWG 410
+ G ++ G + ++ + +V + R G A E +P V NA I G
Sbjct: 146 EGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISG 204
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 114/331 (34%), Positives = 184/331 (55%), Gaps = 10/331 (3%)
Query: 158 QYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEW 217
+ H LAI GF + + SL++ Y +C +A+++ E +R+++S TA+I GF+Q+
Sbjct: 235 ELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQN 294
Query: 218 R-VDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAH---CQIIQMGFHSYL 273
++F M + K + +S+L C ++ GR H + Q+ F L
Sbjct: 295 NCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVAL 354
Query: 274 HVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQ 333
N+LI MY+K G I+DA+ FE M +DV +W S+IAGY +HG ++AI L+ M +
Sbjct: 355 --GNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHE 412
Query: 334 GVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMV-EHGVQPKLDHYSCIVDLLGRAGLIRE 392
+ P+ VT+LSLLS+C H G + G +++M+ +HG++ + +H SCI+D+L R+G + E
Sbjct: 413 RIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEE 472
Query: 393 ARDFIENMP--VCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLY 450
A I + V ++ WG+ L + R HGNV + AA L +EP LA++Y
Sbjct: 473 AYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVY 532
Query: 451 ASVGWWNQVARVRKLMKDKG-LKPNPGSSWI 480
A+ G W+ RKLMK+ G PG S +
Sbjct: 533 AANGAWDNALNTRKLMKESGSCNKAPGYSLV 563
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 109/187 (58%)
Query: 160 HCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRV 219
H +IT GF +N+ + LI LY + A ++F+ + +R+VVSWTA+I+ F++
Sbjct: 35 HGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYH 94
Query: 220 DMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNAL 279
L LF M ++K N FTY S+L +C G L G H + + L V +AL
Sbjct: 95 PDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSAL 154
Query: 280 IAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDA 339
+++Y++CG +++A F++M RD+V+WN+MI GY + A + SLF+ M+ +G PD
Sbjct: 155 LSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDC 214
Query: 340 VTYLSLL 346
T+ SLL
Sbjct: 215 FTFGSLL 221
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 135/296 (45%), Gaps = 23/296 (7%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV 203
+ SC L G+Q H N+ V S+L+SLY+RC +A F+ M ER++
Sbjct: 120 LKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDL 179
Query: 204 VSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQ 263
VSW A+I G+ D LF LM KP+ FT+ SLL A + L H
Sbjct: 180 VSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGL 239
Query: 264 IIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYA-QHGLAQE 322
I++GF + +L+ Y KCG + +A + E RD+++ ++I G++ Q+ +
Sbjct: 240 AIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSD 299
Query: 323 AISLFEEMIKQGVDPDAVTYLSLLSSCR-----------HGGLVKEGQVYFNSMVEHGVQ 371
A +F++MI+ D V S+L C HG +K Q+ F+ + +
Sbjct: 300 AFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNS-- 357
Query: 372 PKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIE 427
++D+ ++G I +A E M + W SL++ HGN I+
Sbjct: 358 --------LIDMYAKSGEIEDAVLAFEEMKE-KDVRSWTSLIAGYGRHGNFEKAID 404
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 4/154 (2%)
Query: 261 HCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLA 320
H I GF S L + + LI +Y K G + A +F+ + RDVV+W +MI+ +++ G
Sbjct: 35 HGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYH 94
Query: 321 QEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCI 380
+A+ LF+EM ++ V + TY S+L SC+ G +KEG S+ + L S +
Sbjct: 95 PDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSAL 154
Query: 381 VDLLGRAGLIREARDFIENMP----VCPNAVIWG 410
+ L R G + EAR ++M V NA+I G
Sbjct: 155 LSLYARCGKMEEARLQFDSMKERDLVSWNAMIDG 188
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 188 bits (478), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 107/282 (37%), Positives = 165/282 (58%), Gaps = 1/282 (0%)
Query: 202 NVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAH 261
+VVSWT+II+G ++ + + F M + PN T +LL AC + +G+ H
Sbjct: 252 DVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIH 311
Query: 262 CQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQ 321
+ G + V +AL+ MY KCG I +A+ +F + VT+NSMI YA HGLA
Sbjct: 312 GYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLAD 371
Query: 322 EAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMV-EHGVQPKLDHYSCI 380
+A+ LF++M G D +T+ ++L++C H GL GQ F M ++ + P+L+HY+C+
Sbjct: 372 KAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACM 431
Query: 381 VDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCS 440
VDLLGRAG + EA + I+ M + P+ +WG+LL++ R HGN+ + AA+ LEP S
Sbjct: 432 VDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENS 491
Query: 441 ATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEV 482
L +LYA+ G W V R++K++K K + GSSW+E
Sbjct: 492 GNGLLLTSLYANAGSWESVVRMKKMIKKKRFRRFLGSSWVET 533
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 119/238 (50%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV 203
+ + G R G H +T+G + + L++ Y C DA +VF+EMP+R++
Sbjct: 23 IEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDI 82
Query: 204 VSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQ 263
+I A+ L+ F M +K + F SLL A +G+ HC
Sbjct: 83 SGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCL 142
Query: 264 IIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEA 323
+++ + S + ++LI MYSK G + +A +F ++ +D+V +N+MI+GYA + A EA
Sbjct: 143 VLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEA 202
Query: 324 ISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIV 381
++L ++M G+ PD +T+ +L+S H ++ M G +P + ++ I+
Sbjct: 203 LNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSII 260
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 125/269 (46%), Gaps = 32/269 (11%)
Query: 152 DLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIA 211
D G HCL + + ++ ++ SSLI +YS+ G+A +VF ++ E+++V + A+I+
Sbjct: 132 DREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMIS 191
Query: 212 GFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHS 271
G+A + D L L M+ +KP+ T+ +L+S GF
Sbjct: 192 GYANNSQADEALNLVKDMKLLGIKPDVITWNALIS---------------------GFS- 229
Query: 272 YLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMI 331
H+ N K I + + + + DVV+W S+I+G + ++A F++M+
Sbjct: 230 --HMRNE-----EKVSEILELMCL--DGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQML 280
Query: 332 KQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIR 391
G+ P++ T ++LL +C +K G+ V G++ S ++D+ G+ G I
Sbjct: 281 THGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFIS 340
Query: 392 EARDFIENMPVCPNAVIWGSLLSSSRLHG 420
EA P V + S++ HG
Sbjct: 341 EAMILFRKTPK-KTTVTFNSMIFCYANHG 368
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 90/178 (50%), Gaps = 4/178 (2%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV 203
+ +C + + G + H ++ TG + +V S+L+ +Y +C +A +F + P++
Sbjct: 295 LPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTT 354
Query: 204 VSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQ 263
V++ ++I +A D +ELF M + K ++ T+T++L+AC +G G+
Sbjct: 355 VTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFL- 413
Query: 264 IIQMGFHSYLHVDN--ALIAMYSKCGVIDDALYIFENM-VGRDVVTWNSMIAGYAQHG 318
++Q + +++ ++ + + G + +A + + M + D+ W +++A HG
Sbjct: 414 LMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHG 471
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 129/460 (28%), Positives = 220/460 (47%), Gaps = 76/460 (16%)
Query: 131 QELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCA---- 186
++L D L+ +S+ +L G + C I F +++ + S+++ +Y++C
Sbjct: 369 EKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVD 428
Query: 187 ---------------------------LSGDAYRVF-----EEMPERNVVSWTAIIAGFA 214
LSG+A R+F E +P NV++W II
Sbjct: 429 AKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPP-NVITWNLIILSLL 487
Query: 215 QEWRVDMCLELF-----------------------------------HLMRGSEMKPNYF 239
+ +VD ++F M+ S ++PN F
Sbjct: 488 RNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAF 547
Query: 240 TYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYL-HVDNALIAMYSKCGVIDDALYIFEN 298
+ T LSAC +L GR H II+ HS L ++ +L+ MY+KCG I+ A +F +
Sbjct: 548 SITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGS 607
Query: 299 MVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEG 358
+ ++ N+MI+ YA +G +EAI+L+ + G+ PD +T ++LS+C H G + +
Sbjct: 608 KLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQA 667
Query: 359 QVYFNSMV-EHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSR 417
F +V + ++P L+HY +VDLL AG +A IE MP P+A + SL++S
Sbjct: 668 IEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCN 727
Query: 418 LHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGS 477
+ + L EP S ++N YA G W++V ++R++MK KGLK PG
Sbjct: 728 KQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGC 787
Query: 478 SWIEVKSK--VHRFEAQDKSNRRMSDILLVIDSLVDHMSS 515
SWI++ + VH F A DK++ R+++I +++ L+ M +
Sbjct: 788 SWIQITGEEGVHVFVANDKTHTRINEIQMMLALLLYDMGT 827
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 170/329 (51%), Gaps = 9/329 (2%)
Query: 143 AVSSCGSKRDLNGGV----QYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEM 198
VS+C S GGV Q H +AI G + +G+SL++ Y + L A VF+ M
Sbjct: 276 TVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRM 335
Query: 199 PERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGR 258
E++VV+W II+G+ Q+ V+ + + LMR ++K + T +L+SA + L G+
Sbjct: 336 FEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGK 395
Query: 259 GAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHG 318
C I+ F S + + + ++ MY+KCG I DA +F++ V +D++ WN+++A YA+ G
Sbjct: 396 EVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESG 455
Query: 319 LAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYS 378
L+ EA+ LF M +GV P+ +T+ ++ S G V E + F M G+ P L ++
Sbjct: 456 LSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWT 515
Query: 379 CIVDLLGRAGLIREARDFIENMP---VCPNAVIWGSLLSSSRLHGNVWIG--IEAAESRL 433
+++ + + G EA F+ M + PNA LS+ ++ IG I R
Sbjct: 516 TMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRN 575
Query: 434 LLEPGCSATLQQLANLYASVGWWNQVARV 462
L + L ++YA G N+ +V
Sbjct: 576 LQHSSLVSIETSLVDMYAKCGDINKAEKV 604
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 152/288 (52%), Gaps = 1/288 (0%)
Query: 128 VMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCAL 187
++E E+ D + + +CG+ + G H + +G V+V SSL +Y +C +
Sbjct: 164 MLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGV 223
Query: 188 SGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSA 247
DA +VF+E+P+RN V+W A++ G+ Q + + + LF MR ++P T ++ LSA
Sbjct: 224 LDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSA 283
Query: 248 CMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTW 307
G + G+ +H I G + +L+ Y K G+I+ A +F+ M +DVVTW
Sbjct: 284 SANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTW 343
Query: 308 NSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE 367
N +I+GY Q GL ++AI + + M + + D VT +L+S+ +K G+ +
Sbjct: 344 NLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIR 403
Query: 368 HGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSS 415
H + + S ++D+ + G I +A+ ++ V + ++W +LL++
Sbjct: 404 HSFESDIVLASTVMDMYAKCGSIVDAKKVFDS-TVEKDLILWNTLLAA 450
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 152/289 (52%), Gaps = 19/289 (6%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTG--FIANVYVGSSLISLYSRCALSGDAYRVFEEMPER 201
+ C +RDL+ G Q H + G + N Y+ + L+ Y++C A +F ++ R
Sbjct: 77 LQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVR 136
Query: 202 NVVSWTAIIAGFAQEWRVDMC---LELFHLMRGSEMKPNYFTYTSLLSACMGSGALG--- 255
NV SW AII + R+ +C L F M +E+ P+ F ++ AC GAL
Sbjct: 137 NVFSWAAII---GVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKAC---GALKWSR 190
Query: 256 YGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYA 315
+GRG H +++ G + V ++L MY KCGV+DDA +F+ + R+ V WN+++ GY
Sbjct: 191 FGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYV 250
Query: 316 QHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLD 375
Q+G +EAI LF +M KQGV+P VT + LS+ + G V+EG+ + +G++ LD
Sbjct: 251 QNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGME--LD 308
Query: 376 HY--SCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNV 422
+ + +++ + GLI A + M + V W ++S G V
Sbjct: 309 NILGTSLLNFYCKVGLIEYAEMVFDRM-FEKDVVTWNLIISGYVQQGLV 356
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 87/175 (49%), Gaps = 3/175 (1%)
Query: 241 YTSLLSACMGSGALGYGRGAHCQIIQMG--FHSYLHVDNALIAMYSKCGVIDDALYIFEN 298
Y +L C+ L G+ H +I++ G + +++ L+ Y+KC ++ A +F
Sbjct: 73 YGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSK 132
Query: 299 MVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEG 358
+ R+V +W ++I + GL + A+ F EM++ + PD ++ +C + G
Sbjct: 133 LRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFG 192
Query: 359 QVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLL 413
+ +V+ G++ + S + D+ G+ G++ +A + +P NAV W +L+
Sbjct: 193 RGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPD-RNAVAWNALM 246
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 182 bits (461), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 103/295 (34%), Positives = 159/295 (53%), Gaps = 33/295 (11%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFE------- 196
+ +C + + G Q H LAI GF +V+ ++L+ LY +C +VF+
Sbjct: 126 IKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSI 185
Query: 197 ------------------------EMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGS 232
+MP RNVVSWTA+I + + R D +LF M+
Sbjct: 186 VSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVD 245
Query: 233 EMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDA 292
++KPN FT +LL A G+L GR H + GF + ALI MYSKCG + DA
Sbjct: 246 DVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDA 305
Query: 293 LYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQG-VDPDAVTYLSLLSSCRH 351
+F+ M G+ + TWNSMI HG +EA+SLFEEM ++ V+PDA+T++ +LS+C +
Sbjct: 306 RKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACAN 365
Query: 352 GGLVKEGQVYFNSMVE-HGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPN 405
G VK+G YF M++ +G+ P +H +C++ LL +A + +A + +E+M P+
Sbjct: 366 TGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPD 420
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 123/295 (41%), Gaps = 33/295 (11%)
Query: 158 QYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEW 217
Q H I + + LIS+ S + A VF ++ + +W +I +
Sbjct: 38 QIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNH 97
Query: 218 RVDMCLELFHLMRGS-EMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVD 276
+ L LF LM S + + + FT+ ++ AC+ S ++ G H I+ GF + +
Sbjct: 98 KPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQ 157
Query: 277 NALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAG----------------------- 313
N L+ +Y KCG D +F+ M GR +V+W +M+ G
Sbjct: 158 NTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVV 217
Query: 314 --------YAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSM 365
Y ++ EA LF M V P+ T ++LL + G + G+ +
Sbjct: 218 SWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYA 277
Query: 366 VEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHG 420
++G + ++D+ + G +++AR + M + W S+++S +HG
Sbjct: 278 HKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQ-GKSLATWNSMITSLGVHG 331
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 109/351 (31%), Positives = 179/351 (50%), Gaps = 37/351 (10%)
Query: 167 GFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERN------------------------ 202
GF ++VYV ++L+ +Y DA++VF+EMPERN
Sbjct: 153 GFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFL 212
Query: 203 -------VVSWTAIIAGFAQEWRVDMCLELFHLMRGSE-MKPNYFTYTSLLSACMGSGAL 254
VVSWT II G+A+ + + LF M + +KPN T ++L A G L
Sbjct: 213 EKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDL 272
Query: 255 GYGRGAHCQIIQMGF-HSYLHVDNALIAMYSKCGVIDDALYIFENMVG--RDVVTWNSMI 311
H + + GF + V N+LI Y+KCG I A F + +++V+W +MI
Sbjct: 273 KMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMI 332
Query: 312 AGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQV-YFNSMV-EHG 369
+ +A HG+ +EA+S+F++M + G+ P+ VT +S+L++C HGGL +E + +FN+MV E+
Sbjct: 333 SAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYK 392
Query: 370 VQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAA 429
+ P + HY C+VD+L R G + EA +P+ AV+W LL + ++ + +
Sbjct: 393 ITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVT 452
Query: 430 ESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWI 480
+ LE ++N++ G + R RK M +G+ PG S +
Sbjct: 453 RKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 42/211 (19%)
Query: 266 QMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIA------------- 312
++GF S+++V AL+ MY G + DA +F+ M R+ VTWN MI
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 313 ------------------GYAQHGLAQEAISLFEEMIK-QGVDPDAVTYLSLLSSCRHGG 353
GYA+ +EAI LF M+ + P+ +T L++L + + G
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 354 LVKEGQVYFNSMVEHGVQP-KLDHYSCIVDLLGRAGLIREARDFIENMPVC-PNAVIWGS 411
+K + + G P + + ++D + G I+ A F +P N V W +
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 412 LLSSSRLHGNVWIGIEAAE-----SRLLLEP 437
++S+ +HG +G EA RL L+P
Sbjct: 331 MISAFAIHG---MGKEAVSMFKDMERLGLKP 358
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 152 DLNGGVQYHCLAITTGFIA-NVYVGSSLISLYSRCALSGDAYRVFEEMP--ERNVVSWTA 208
DL H GF+ ++ V +SLI Y++C A++ F E+P +N+VSWT
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 209 IIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSG 252
+I+ FA + +F M +KPN T S+L+AC G
Sbjct: 331 MISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGG 374
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 103/322 (31%), Positives = 175/322 (54%), Gaps = 2/322 (0%)
Query: 160 HCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRV 219
H + ++ YVG +L+++YSRC A VF + E ++V+ +++I G+++
Sbjct: 230 HAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNH 289
Query: 220 DMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNAL 279
L LF +R S KP+ +L +C G+ H +I++G + V +AL
Sbjct: 290 KEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSAL 349
Query: 280 IAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDA 339
I MYSKCG++ A+ +F + +++V++NS+I G HG A A F E+++ G+ PD
Sbjct: 350 IDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDE 409
Query: 340 VTYLSLLSSCRHGGLVKEGQVYFNSM-VEHGVQPKLDHYSCIVDLLGRAGLIREARDFIE 398
+T+ +LL +C H GL+ +GQ F M E G++P+ +HY +V L+G AG + EA +F+
Sbjct: 410 ITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVM 469
Query: 399 NMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAES-RLLLEPGCSATLQQLANLYASVGWWN 457
++ ++ I G+LLS +H N + AE+ E S L+N+YA G W+
Sbjct: 470 SLQKPIDSGILGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWD 529
Query: 458 QVARVRKLMKDKGLKPNPGSSW 479
+V R+R + + PG SW
Sbjct: 530 EVERLRDGISESYGGKLPGISW 551
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 132/269 (49%), Gaps = 1/269 (0%)
Query: 152 DLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIA 211
D G H +AI +G + GS+++ YS+ L +A ++F +P+ ++ W +I
Sbjct: 121 DTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMIL 180
Query: 212 GFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHS 271
G+ D + LF+LM+ +PN +T +L S + L H +++ S
Sbjct: 181 GYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDS 240
Query: 272 YLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMI 331
+ +V AL+ MYS+C I A +F ++ D+V +S+I GY++ G +EA+ LF E+
Sbjct: 241 HSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELR 300
Query: 332 KQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIR 391
G PD V +L SC G+ + ++ G++ + S ++D+ + GL++
Sbjct: 301 MSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLK 360
Query: 392 EARDFIENMPVCPNAVIWGSLLSSSRLHG 420
A +P N V + SL+ LHG
Sbjct: 361 CAMSLFAGIPE-KNIVSFNSLILGLGLHG 388
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 88/193 (45%), Gaps = 6/193 (3%)
Query: 158 QYHCLAITTGFIANVYVGSSLISLYSRCALSGD---AYRVFEEMPERNVVSWTAIIAGFA 214
+ H + + Y + L Y AL+ D A ++F+ PER+V W +II +A
Sbjct: 26 KLHSFVTKSKLARDPYFATQLARFY---ALNDDLISARKLFDVFPERSVFLWNSIIRAYA 82
Query: 215 QEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLH 274
+ + L LF + S+ +P+ FTY L S R H I G
Sbjct: 83 KAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQI 142
Query: 275 VDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQG 334
+A++ YSK G+I +A +F ++ D+ WN MI GY G + I+LF M +G
Sbjct: 143 CGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRG 202
Query: 335 VDPDAVTYLSLLS 347
P+ T ++L S
Sbjct: 203 HQPNCYTMVALTS 215
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%)
Query: 136 DVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVF 195
D ++ + SC D G + H I G ++ V S+LI +YS+C L A +F
Sbjct: 307 DCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLF 366
Query: 196 EEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALG 255
+PE+N+VS+ ++I G E F + + P+ T+++LL C SG L
Sbjct: 367 AGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLN 426
Query: 256 YGR 258
G+
Sbjct: 427 KGQ 429
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/349 (33%), Positives = 184/349 (52%), Gaps = 17/349 (4%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP 199
LS V +C S + L G Q H + + TG V +G+++IS YS L +A +V+ +
Sbjct: 188 LSSVVKTCASLKILQQGKQVHAMVVVTGRDL-VVLGTAMISFYSSVGLINEAMKVYNSLN 246
Query: 200 -ERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGR 258
+ V ++I+G + E F LM S +PN +S L+ C + L G+
Sbjct: 247 VHTDEVMLNSLISGCIRNRNYK---EAFLLM--SRQRPNVRVLSSSLAGCSDNSDLWIGK 301
Query: 259 GAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHG 318
HC ++ GF S + N L+ MY KCG I A IF + + VV+W SMI YA +G
Sbjct: 302 QIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNG 361
Query: 319 LAQEAISLFEEMIKQ--GVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE-HGVQPKLD 375
+A+ +F EM ++ GV P++VT+L ++S+C H GLVKEG+ F M E + + P +
Sbjct: 362 DGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTE 421
Query: 376 HYSCIVDLLGRAGLIREARDFIENMPVCPN----AVIWGSLLSSSRLHGNVWIGIEAAES 431
HY C +D+L +AG E +E M N IW ++LS+ L+ ++ G E
Sbjct: 422 HYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRG-EYVAR 480
Query: 432 RLLLE--PGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSS 478
RL+ E P ++ ++N YA++G W+ V +R +K+KGL G S
Sbjct: 481 RLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHS 529
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 163/346 (47%), Gaps = 22/346 (6%)
Query: 156 GVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQ 215
G Q H L I G ++LI +YS+ D+ RVFE + E+++VSW A+++GF +
Sbjct: 103 GRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLR 162
Query: 216 EWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHV 275
+ L +F M ++ + FT +S++ C L G+ H ++ G + +
Sbjct: 163 NGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTG-RDLVVL 221
Query: 276 DNALIAMYSKCGVIDDALYIFENM-VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQG 334
A+I+ YS G+I++A+ ++ ++ V D V NS+I+G ++ +EA L M +Q
Sbjct: 222 GTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLL---MSRQ- 277
Query: 335 VDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREAR 394
P+ S L+ C + G+ + +G + ++D+ G+ G I +AR
Sbjct: 278 -RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQAR 336
Query: 395 DFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAES-RLLLEPGC-----SATLQQLAN 448
+P + V W S++ + ++G+ G++A E R + E G S T + +
Sbjct: 337 TIFRAIP-SKSVVSWTSMIDAYAVNGD---GVKALEIFREMCEEGSGVLPNSVTFLVVIS 392
Query: 449 LYASVGWWNQVARVRKLMKDKGLKPNPGSS----WIEVKSKVHRFE 490
A G + +MK+K + PG+ +I++ SK E
Sbjct: 393 ACAHAGLVKEGKECFGMMKEK-YRLVPGTEHYVCFIDILSKAGETE 437
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 133/261 (50%), Gaps = 8/261 (3%)
Query: 159 YHCLAITTGF-IANVYVGSSLISLYSRCAL----SGDAYRVFEEMPERNVVSWTAIIAGF 213
+ CL I + NV V S+ +L RC + A +F+E+P+R++ S + ++
Sbjct: 2 FACLRIGRFIRLGNVTVKST--NLVLRCVFIRNFATHADHLFDELPQRDLSSLNSQLSSH 59
Query: 214 AQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYL 273
+ + L LF + + + T+T +L AC GR H +I+ G +
Sbjct: 60 LRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGT 119
Query: 274 HVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQ 333
ALI MYSK G + D++ +FE++ +D+V+WN++++G+ ++G +EA+ +F M ++
Sbjct: 120 ISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRE 179
Query: 334 GVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREA 393
V+ T S++ +C ++++G+ ++MV + + + ++ GLI EA
Sbjct: 180 RVEISEFTLSSVVKTCASLKILQQGK-QVHAMVVVTGRDLVVLGTAMISFYSSVGLINEA 238
Query: 394 RDFIENMPVCPNAVIWGSLLS 414
++ V + V+ SL+S
Sbjct: 239 MKVYNSLNVHTDEVMLNSLIS 259
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 69/125 (55%), Gaps = 2/125 (1%)
Query: 136 DVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVF 195
+V LS +++ C DL G Q HC+A+ GF+++ + + L+ +Y +C A +F
Sbjct: 280 NVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIF 339
Query: 196 EEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLM--RGSEMKPNYFTYTSLLSACMGSGA 253
+P ++VVSWT++I +A LE+F M GS + PN T+ ++SAC +G
Sbjct: 340 RAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGL 399
Query: 254 LGYGR 258
+ G+
Sbjct: 400 VKEGK 404
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 133/234 (56%), Gaps = 1/234 (0%)
Query: 181 LYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFT 240
+YSR ++ ++ + + + VSW IA ++ + +ELF M S ++P+ +T
Sbjct: 488 IYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYT 547
Query: 241 YTSLLSACMGSGALGYGRGAHCQIIQMGFH-SYLHVDNALIAMYSKCGVIDDALYIFENM 299
+ S+LS C L G H I + F + V N LI MY KCG I + +FE
Sbjct: 548 FVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEET 607
Query: 300 VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQ 359
++++TW ++I+ HG QEA+ F+E + G PD V+++S+L++CRHGG+VKEG
Sbjct: 608 REKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGM 667
Query: 360 VYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLL 413
F M ++GV+P++DHY C VDLL R G ++EA I MP +A +W + L
Sbjct: 668 GLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFL 721
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 104/199 (52%), Gaps = 1/199 (0%)
Query: 151 RDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAII 210
+DL+ Q HC A G + V +SLIS Y +C + A R+F++ ++VSW AII
Sbjct: 229 KDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAII 288
Query: 211 AGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFH 270
A+ L+LF M PN TY S+L L GR H +I+ G
Sbjct: 289 CATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCE 348
Query: 271 SYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEM 330
+ + + NALI Y+KCG ++D+ F+ + +++V WN++++GYA +SLF +M
Sbjct: 349 TGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKD-GPICLSLFLQM 407
Query: 331 IKQGVDPDAVTYLSLLSSC 349
++ G P T+ + L SC
Sbjct: 408 LQMGFRPTEYTFSTALKSC 426
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 160/340 (47%), Gaps = 25/340 (7%)
Query: 146 SCGSKRDLNGGVQYHCLAITTG-FIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVV 204
SC S D+ G Q H L++ G F+A+ +VG+ L+ LY R L A +VFE+MP +++
Sbjct: 123 SCAS-LDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLE 181
Query: 205 SWTAIIAGFAQEWRVDMCLELF-HLMR-GSEMKPNYFTYTSLLSACMGSGALGYGRGAHC 262
+W +++ + C+ F L+R G+ + + F +C+ L + HC
Sbjct: 182 TWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKD--LDISKQLHC 239
Query: 263 QIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQE 322
+ G + V N+LI+ Y KCG A +F++ D+V+WN++I A+ +
Sbjct: 240 SATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLK 299
Query: 323 AISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVD 382
A+ LF M + G P+ TY+S+L L+ G+ ++++G + + + ++D
Sbjct: 300 ALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALID 359
Query: 383 LLGRAGLIREAR---DFIENMPVCPNAVIWGSLLSS----------SRLHGNVWIGIEAA 429
+ G + ++R D+I + N V W +LLS S + +G
Sbjct: 360 FYAKCGNLEDSRLCFDYIRD----KNIVCWNALLSGYANKDGPICLSLFLQMLQMGFRPT 415
Query: 430 ESRL--LLEPGCSATLQQLANLYASVGWWNQVARVRKLMK 467
E L+ C LQQL ++ +G+ + + LM+
Sbjct: 416 EYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMR 455
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 148/318 (46%), Gaps = 56/318 (17%)
Query: 153 LNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAG 212
L+ G Q H + I G + +G++LI Y++C D+ F+ + ++N+V W A+++G
Sbjct: 332 LSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSG 391
Query: 213 FAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSY 272
+A + +CL LF M +P +T+++ L +C + + H I++MG+
Sbjct: 392 YANK-DGPICLSLFLQMLQMGFRPTEYTFSTALKSC----CVTELQQLHSVIVRMGYEDN 446
Query: 273 LHVDNALIAMYSKCGVIDDALYIFE-----------NMVG-------------------- 301
+V ++L+ Y+K +++DAL + + N+V
Sbjct: 447 DYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLE 506
Query: 302 -RDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQV 360
D V+WN IA ++ +E I LF+ M++ + PD T++S+LS C K +
Sbjct: 507 QPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCS-----KLCDL 561
Query: 361 YFNSMVEHGVQPKLDHYSC--------IVDLLGRAGLIREARDFIENMPVCPNAVIWGSL 412
S + HG+ K D +SC ++D+ G+ G IR E N + W +L
Sbjct: 562 TLGSSI-HGLITKTD-FSCADTFVCNVLIDMYGKCGSIRSVMKVFEETRE-KNLITWTAL 618
Query: 413 LSSSRLHGNVWIGIEAAE 430
+S +HG G EA E
Sbjct: 619 ISCLGIHG---YGQEALE 633
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 98/190 (51%), Gaps = 5/190 (2%)
Query: 160 HCLAIT--TGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEW 217
H L+IT + + VYV +++ISLY + A +VF++MPERN VS+ II G+++
Sbjct: 35 HALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYG 94
Query: 218 RVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMG-FHSYLHVD 276
VD +F MR PN T + LLS S + G H ++ G F + V
Sbjct: 95 DVDKAWGVFSEMRYFGYLPNQSTVSGLLSC--ASLDVRAGTQLHGLSLKYGLFMADAFVG 152
Query: 277 NALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVD 336
L+ +Y + +++ A +FE+M + + TWN M++ G +E + F E+++ G
Sbjct: 153 TCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGAS 212
Query: 337 PDAVTYLSLL 346
++L +L
Sbjct: 213 LTESSFLGVL 222
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 12/177 (6%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGF-IANVYVGSSLISLYSRCALSGDAYRVFEEMPERN 202
+S C DL G H L T F A+ +V + LI +Y +C +VFEE E+N
Sbjct: 552 LSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKN 611
Query: 203 VVSWTAIIA-----GFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYG 257
+++WTA+I+ G+ QE LE F KP+ ++ S+L+AC G + G
Sbjct: 612 LITWTALISCLGIHGYGQE-----ALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEG 666
Query: 258 RGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM-VGRDVVTWNSMIAG 313
G ++ G + + + ++ G + +A ++ M D W + + G
Sbjct: 667 MGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDG 723
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 21/171 (12%)
Query: 242 TSLLSACMGSGALGYGRGAHCQIIQMG--FHSYLHVDNALIAMYSKCGVIDDALYIFENM 299
SLL+ C + + + H I + ++V N +I++Y K G + A +F+ M
Sbjct: 16 VSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQM 75
Query: 300 VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCR--------- 350
R+ V++N++I GY+++G +A +F EM G P+ T LLS
Sbjct: 76 PERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLDVRAGTQL 135
Query: 351 HGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMP 401
HG +K G ++ V +C++ L GR L+ A E+MP
Sbjct: 136 HGLSLKYGLFMADAFVG----------TCLLCLYGRLDLLEMAEQVFEDMP 176
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 168 bits (425), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 149/268 (55%), Gaps = 2/268 (0%)
Query: 129 MEQE-LGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCAL 187
M+QE DV ++ + C R + G + HC A+ F+ NV + +SL+ +YS+C +
Sbjct: 409 MQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGV 468
Query: 188 SGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSA 247
R+F+ + +RNV +WTA+I + + + +E+F LM S+ +P+ T +L+
Sbjct: 469 PEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTV 528
Query: 248 CMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTW 307
C AL G+ H I++ F S V +I MY KCG + A + F+ + + +TW
Sbjct: 529 CSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTW 588
Query: 308 NSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE 367
++I Y + L ++AI+ FE+M+ +G P+ T+ ++LS C G V E +FN M+
Sbjct: 589 TAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLR 648
Query: 368 -HGVQPKLDHYSCIVDLLGRAGLIREAR 394
+ +QP +HYS +++LL R G + EA+
Sbjct: 649 MYNLQPSEEHYSLVIELLNRCGRVEEAQ 676
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 144/299 (48%), Gaps = 10/299 (3%)
Query: 129 MEQE-LGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCAL 187
+EQ + V+ S + +C ++ L G Q H G +N ++ + L+ +Y+ C
Sbjct: 102 LEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGS 161
Query: 188 SGDAYRVFEEMPERNVVSWTAIIAG--FAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLL 245
DA +VF+E NV SW A++ G + + R L F MR + N ++ +++
Sbjct: 162 VKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVF 221
Query: 246 SACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVV 305
+ G+ AL G H I+ G + + + +L+ MY KCG + A +F+ +V RD+V
Sbjct: 222 KSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIV 281
Query: 306 TWNSMIAGYAQHGLAQEAISLFEEMI-KQGVDPDAV---TYLSLLSSCRHGGLVKEGQVY 361
W +MIAG A + EA+ LF MI ++ + P++V T L +L + L KE +
Sbjct: 282 VWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAH 341
Query: 362 FNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHG 420
+ QP + +S ++DL + G + R NA+ W +L+S +G
Sbjct: 342 VLKSKNYVEQPFV--HSGLIDLYCKCGDMASGRRVFYGSKQ-RNAISWTALMSGYAANG 397
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 138/289 (47%), Gaps = 2/289 (0%)
Query: 128 VMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITT-GFIANVYVGSSLISLYSRCA 186
+ E+++ + L+ + G + L G + H + + ++ +V S LI LY +C
Sbjct: 307 ISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCG 366
Query: 187 LSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLS 246
RVF +RN +SWTA+++G+A R D L M+ +P+ T ++L
Sbjct: 367 DMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLP 426
Query: 247 ACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVT 306
C A+ G+ HC ++ F + + +L+ MYSKCGV + + +F+ + R+V
Sbjct: 427 VCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKA 486
Query: 307 WNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMV 366
W +MI Y ++ + I +F M+ PD+VT +L+ C +K G+ ++
Sbjct: 487 WTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHIL 546
Query: 367 EHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSS 415
+ + + I+ + G+ G +R A +F + ++ W +++ +
Sbjct: 547 KKEFESIPFVSARIIKMYGKCGDLRSA-NFSFDAVAVKGSLTWTAIIEA 594
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 103/210 (49%), Gaps = 9/210 (4%)
Query: 210 IAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGF 269
I FA++ +++ L + + + N T+++LL AC+ +L +G+ H I G
Sbjct: 83 IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGL 142
Query: 270 HSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLA--QEAISLF 327
S + L+ MY+ CG + DA +F+ +V +WN+++ G G Q+ +S F
Sbjct: 143 ESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTF 202
Query: 328 EEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLL--- 384
EM + GVD + + ++ S +++G +++G+ + + +VD+
Sbjct: 203 TEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKC 262
Query: 385 GRAGLIREARDFIENMPVCPNAVIWGSLLS 414
G+ GL R D I V + V+WG++++
Sbjct: 263 GKVGLARRVFDEI----VERDIVVWGAMIA 288
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 181/360 (50%), Gaps = 37/360 (10%)
Query: 156 GVQYHCLAITTGFIANVYVGSSLISLYSR----------------------------CAL 187
GV H A+ GF+ + +V +S + Y C
Sbjct: 105 GVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGR 164
Query: 188 SGD---AYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSE---MKPNYFTY 241
+G+ A+ F+ MP +VVSWT +I GF+++ L +F M +E + PN T+
Sbjct: 165 NGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATF 224
Query: 242 TSLLSAC--MGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM 299
S+LS+C G + G+ H ++ + AL+ MY K G ++ AL IF+ +
Sbjct: 225 VSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQI 284
Query: 300 VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQ 359
+ V WN++I+ A +G ++A+ +FE M V P+ +T L++L++C LV G
Sbjct: 285 RDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGI 344
Query: 360 VYFNSMV-EHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRL 418
F+S+ E+ + P +HY C+VDL+GRAGL+ +A +FI+++P P+A + G+LL + ++
Sbjct: 345 QLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKI 404
Query: 419 HGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSS 478
H N +G + + L+P L+ A W++ ++RK M + G++ P S
Sbjct: 405 HENTELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 109/251 (43%), Gaps = 39/251 (15%)
Query: 206 WTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQII 265
+ +I + L LF M S ++PN T+ SL+ A S ++ YG H Q +
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 266 QMGFHSYLHVDNALIAMYSKCG-------VIDD------------------------ALY 294
+ GF V + + Y + G + DD A
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 295 IFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQG---VDPDAVTYLSLLSSCRH 351
F+ M DVV+W ++I G+++ GL +A+ +F EMI+ + P+ T++S+LSSC +
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 352 --GGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREAR---DFIENMPVCPNA 406
G ++ G+ ++ + + ++D+ G+AG + A D I + VC
Sbjct: 234 FDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWN 293
Query: 407 VIWGSLLSSSR 417
I +L S+ R
Sbjct: 294 AIISALASNGR 304
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 144 VSSCGS--KRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPER 201
+SSC + + + G Q H ++ I +G++L+ +Y + A +F+++ ++
Sbjct: 228 LSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDK 287
Query: 202 NVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYG 257
V +W AII+ A R LE+F +M+ S + PN T ++L+AC S + G
Sbjct: 288 KVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLG 343
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 179/342 (52%), Gaps = 4/342 (1%)
Query: 147 CGSKRDLNGGVQYHCLAITTGF-IANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVS 205
C D+ G Q HC + GF +++++V S+LI +Y +C ++ +++ +P N+
Sbjct: 325 CSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLEC 384
Query: 206 WTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGS--GALGYGRGAHCQ 263
+++ +E+F LM + T +++L A S +L HC
Sbjct: 385 CNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCC 444
Query: 264 IIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEA 323
I+ G+ + + V +LI Y+K G + + +F+ + ++ S+I GYA++G+ +
Sbjct: 445 AIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDC 504
Query: 324 ISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSM-VEHGVQPKLDHYSCIVD 382
+ + EM + + PD VT LS+LS C H GLV+EG++ F+S+ ++G+ P Y+C+VD
Sbjct: 505 VKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVD 564
Query: 383 LLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSAT 442
LLGRAGL+ +A + + V W SLL S R+H N IG AAE + LEP A
Sbjct: 565 LLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAV 624
Query: 443 LQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKS 484
Q++ Y +G + ++R++ + L G S + VK+
Sbjct: 625 YIQVSKFYFEIGDFEISRQIREIAASRELMREIGYSSVVVKN 666
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 118/217 (54%), Gaps = 5/217 (2%)
Query: 134 GVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGF-IANVYVGSSLISLYSRCALSGDAY 192
G+ C++ + C R + G Q H L + +G+ I+N++V + L+ YS C +
Sbjct: 213 GLTYCYM---IRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSM 269
Query: 193 RVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSG 252
R F +PE++V+SW +I++ A V L+LF M+ +P+ + S L+ C +
Sbjct: 270 RSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNS 329
Query: 253 ALGYGRGAHCQIIQMGFH-SYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMI 311
+ G+ HC +++MGF S LHV +ALI MY KC I+++ +++++ ++ NS++
Sbjct: 330 DIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLM 389
Query: 312 AGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSS 348
G+ ++ I +F MI +G D VT ++L +
Sbjct: 390 TSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKA 426
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 134/275 (48%), Gaps = 3/275 (1%)
Query: 143 AVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERN 202
+S C + G+Q HC I+ GF N++V S+L+ LY+ L A ++F+EM +RN
Sbjct: 118 VLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRN 177
Query: 203 VVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHC 262
+ ++ F Q E++ M + N TY ++ C + G+ H
Sbjct: 178 LAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHS 237
Query: 263 QIIQMGFH-SYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQ 321
+++ G++ S + V N L+ YS CG + ++ F + +DV++WNS+++ A +G
Sbjct: 238 LVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVL 297
Query: 322 EAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHY-SCI 380
+++ LF +M G P ++S L+ C ++ G+ +++ G H S +
Sbjct: 298 DSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSAL 357
Query: 381 VDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSS 415
+D+ G+ I + +++P C N SL++S
Sbjct: 358 IDMYGKCNGIENSALLYQSLP-CLNLECCNSLMTS 391
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 118/240 (49%), Gaps = 16/240 (6%)
Query: 191 AYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMG 250
A+ F+EM R+VV++ +I+G ++ +EL+ M ++ + T+ S+LS C
Sbjct: 65 AHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSD 124
Query: 251 SGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSM 310
G HC++I +GF + V +AL+ +Y+ ++D AL +F+ M+ R++ N +
Sbjct: 125 ELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLL 184
Query: 311 IAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHG- 369
+ + Q G ++ ++ M +GV + +TY ++ C H LV EG+ + +V+ G
Sbjct: 185 LRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGW 244
Query: 370 -------VQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNV 422
+D+YS DL G R F N + + W S++S +G+V
Sbjct: 245 NISNIFVANVLVDYYSACGDLSG------SMRSF--NAVPEKDVISWNSIVSVCADYGSV 296
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 266 QMGFHSYL--------HVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQH 317
+M F S+L + N I K G + A F+ M RDVVT+N +I+G +++
Sbjct: 31 RMDFSSFLEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRY 90
Query: 318 GLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEG 358
G + AI L+ EM+ G+ A T+ S+LS C +EG
Sbjct: 91 GCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREG 131
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 154/281 (54%), Gaps = 4/281 (1%)
Query: 127 SVMEQEL-GVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRC 185
++M QE+ +D L ++ C D+ G Q H G+ NV V ++L+ +Y +C
Sbjct: 384 TLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKC 443
Query: 186 ALSGDAYRVFEEMPE-RNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSL 244
A F +M E R+ VSW A++ G A+ R + L F M+ E KP+ +T +L
Sbjct: 444 GTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQ-VEAKPSKYTLATL 502
Query: 245 LSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDV 304
L+ C AL G+ H +I+ G+ + + A++ MYSKC D A+ +F+ RD+
Sbjct: 503 LAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDL 562
Query: 305 VTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNS 364
+ WNS+I G ++G ++E LF + +GV PD VT+L +L +C G V+ G YF+S
Sbjct: 563 ILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSS 622
Query: 365 M-VEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCP 404
M ++ + P+++HY C+++L + G + + +F+ MP P
Sbjct: 623 MSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDP 663
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 164/367 (44%), Gaps = 75/367 (20%)
Query: 133 LGVDVCFLSHAVSS----CGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRC--- 185
L ++V L+H VSS C L G H +A+ +A+ V +S+ +Y +C
Sbjct: 255 LELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRL 314
Query: 186 -------------------------ALSG---DAYRVFEEMPERNVVSWTAIIAGF--AQ 215
A+SG +A +F+ MPERN+VSW A++ G+ A
Sbjct: 315 ESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAH 374
Query: 216 EWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHV 275
EW D L+ LMR + T +L+ C G + G+ AH I + G+ + + V
Sbjct: 375 EW--DEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIV 432
Query: 276 DNALIAMYSKCGVIDDALYIFENMVG-RDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQG 334
NAL+ MY KCG + A F M RD V+WN+++ G A+ G +++A+S FE M +
Sbjct: 433 ANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEA 492
Query: 335 VDPDAVTYLSLLSSCR-----------HGGLVKEGQ----VYFNSMVEHGVQPKLDHYSC 379
P T +LL+ C HG L+++G V +MV+ + + Y+
Sbjct: 493 -KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAI 551
Query: 380 IV-------DLL------------GRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHG 420
V DL+ GR+ + E +EN V P+ V + +L + G
Sbjct: 552 EVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREG 611
Query: 421 NVWIGIE 427
+V +G +
Sbjct: 612 HVELGFQ 618
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 138/302 (45%), Gaps = 31/302 (10%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV 203
+ SCG DL Q HC + G+ NV + +S++ +Y +C + DA RVF+E+ +
Sbjct: 169 LKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSD 228
Query: 204 VSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQ 263
VSW I+ + + D + +F M ++P T +S++ AC S AL G+ H
Sbjct: 229 VSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAI 288
Query: 264 IIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEA 323
+++ + V ++ MY KC ++ A +F+ +D+ +W S ++GYA GL +EA
Sbjct: 289 AVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREA 348
Query: 324 ISLFEEMIKQGV-------------------------------DPDAVTYLSLLSSCRHG 352
LF+ M ++ + + D VT + +L+ C
Sbjct: 349 RELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGI 408
Query: 353 GLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSL 412
V+ G+ + HG + + ++D+ G+ G ++ A + M + V W +L
Sbjct: 409 SDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNAL 468
Query: 413 LS 414
L+
Sbjct: 469 LT 470
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 152/361 (42%), Gaps = 33/361 (9%)
Query: 94 RSHLRLIEDMLENSVINHVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKRDL 153
++H R+I + +V + +L + +S + V SC SK +
Sbjct: 18 KTHKRVIGTGTKLTVTRQILEHLEGGNVSKAVSVLFASPEPVSYWLYERLFRSCSSKALV 77
Query: 154 NGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGF 213
+ +T + +++ + I Y +C DA +FEEMPER+ SW A+I
Sbjct: 78 VQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITAC 137
Query: 214 AQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYL 273
AQ D +F M ++ ++ +L +C L R HC +++ G+ +
Sbjct: 138 AQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNV 197
Query: 274 HVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQ 333
++ +++ +Y KC V+ DA +F+ +V V+WN ++ Y + G EA+ +F +M++
Sbjct: 198 DLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLEL 257
Query: 334 GVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGR------- 386
V P T S++ +C ++ G+V V+ V + + D+ +
Sbjct: 258 NVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESA 317
Query: 387 ------------------------AGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNV 422
+GL REAR+ + MP N V W ++L +H +
Sbjct: 318 RRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPE-RNIVSWNAMLGGY-VHAHE 375
Query: 423 W 423
W
Sbjct: 376 W 376
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 145/270 (53%), Gaps = 1/270 (0%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV 203
+ +C ++ L G Q H L + +V+VG+SL+ +Y++C D +VF+ M RN
Sbjct: 291 LKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNT 350
Query: 204 VSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQ 263
V+WT+IIA A+E + + LF +M+ + N T S+L AC GAL G+ H Q
Sbjct: 351 VTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQ 410
Query: 264 IIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEA 323
II+ +++ + L+ +Y KCG DA + + + RDVV+W +MI+G + G EA
Sbjct: 411 IIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEA 470
Query: 324 ISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDL 383
+ +EMI++GV+P+ TY S L +C + + G+ + ++ + S ++ +
Sbjct: 471 LDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHM 530
Query: 384 LGRAGLIREARDFIENMPVCPNAVIWGSLL 413
+ G + EA ++MP N V W +++
Sbjct: 531 YAKCGFVSEAFRVFDSMPE-KNLVSWKAMI 559
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 119/204 (58%)
Query: 146 SCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVS 205
+CGS L G + H I NVY+GS+L+ LY +C S DA+ V +++P R+VVS
Sbjct: 394 ACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVS 453
Query: 206 WTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQII 265
WTA+I+G + L+ M ++PN FTY+S L AC S +L GR H
Sbjct: 454 WTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAK 513
Query: 266 QMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAIS 325
+ S + V +ALI MY+KCG + +A +F++M +++V+W +MI GYA++G +EA+
Sbjct: 514 KNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALK 573
Query: 326 LFEEMIKQGVDPDAVTYLSLLSSC 349
L M +G + D + ++LS+C
Sbjct: 574 LMYRMEAEGFEVDDYIFATILSTC 597
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 162/329 (49%), Gaps = 36/329 (10%)
Query: 147 CGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSW 206
C + + G Q H + G + N+ V SSL+ Y++C A R F+ M E++V+SW
Sbjct: 194 CSRRAEFELGRQVHGNMVKVG-VGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISW 252
Query: 207 TAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQ 266
TA+I+ +++ + +F M PN FT S+L AC AL +GR H +++
Sbjct: 253 TAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVK 312
Query: 267 MGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISL 326
+ + V +L+ MY+KCG I D +F+ M R+ VTW S+IA +A+ G +EAISL
Sbjct: 313 RMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISL 372
Query: 327 FEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGR 386
F M ++ + + +T +S+L +C G + G+ ++++ ++ + S +V L +
Sbjct: 373 FRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCK 432
Query: 387 AGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQL 446
G R+A + ++ +P + V W +++S GCS
Sbjct: 433 CGESRDAFNVLQQLP-SRDVVSWTAMIS-----------------------GCS------ 462
Query: 447 ANLYASVGWWNQVARVRKLMKDKGLKPNP 475
S+G ++ K M +G++PNP
Sbjct: 463 -----SLGHESEALDFLKEMIQEGVEPNP 486
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 138/276 (50%), Gaps = 14/276 (5%)
Query: 158 QYHCLAITTGFIANVYVGSSLISLYSRCALSGD---AYRVFEEMPERNVVSWTAIIAGFA 214
+ H +A+ +Y G++LIS C GD A +VF+ MPE+N V+WTA+I G+
Sbjct: 103 RIHAMALKCFDDQVIYFGNNLIS---SCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYL 159
Query: 215 QEWRVDMCLELF--HLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSY 272
+ D LF ++ G N + LL+ C GR H ++++G +
Sbjct: 160 KYGLEDEAFALFEDYVKHGIRF-TNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGN- 217
Query: 273 LHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIK 332
L V+++L+ Y++CG + AL F+ M +DV++W ++I+ ++ G +AI +F M+
Sbjct: 218 LIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLN 277
Query: 333 QGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIRE 392
P+ T S+L +C ++ G+ + +V+ ++ + + ++D+ + G I +
Sbjct: 278 HWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISD 337
Query: 393 ARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEA 428
R + M N V W S++++ H G EA
Sbjct: 338 CRKVFDGMSN-RNTVTWTSIIAA---HAREGFGEEA 369
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 64/108 (59%)
Query: 141 SHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPE 200
S A+ +C + L G H +A ++NV+VGS+LI +Y++C +A+RVF+ MPE
Sbjct: 490 SSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPE 549
Query: 201 RNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSAC 248
+N+VSW A+I G+A+ L+L + M + + + + ++LS C
Sbjct: 550 KNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTC 597
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 183/389 (47%), Gaps = 71/389 (18%)
Query: 170 ANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLM 229
NV VG+ LI +Y +C DA VF+ M E++ VSW AI+A ++ ++++ L FH M
Sbjct: 190 GNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQM 249
Query: 230 RGSEM---------------------------KPNYFTYTSLLSACMGSGALG------- 255
+ PN ++ ++L+ + S G
Sbjct: 250 PNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFT 309
Query: 256 ----------------------------YGRGAHCQIIQMGFHSYLHVDNALIAMYSKCG 287
+G H ++G S + V +ALI MYSKCG
Sbjct: 310 KMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCG 369
Query: 288 VIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQG-VDPDAVTYLSLL 346
++ A +F M ++++ WN MI+GYA++G + EAI LF ++ ++ + PD T+L+LL
Sbjct: 370 MLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLL 429
Query: 347 SSCRHGGLVKEGQV-YFNSMV-EHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCP 404
+ C H + E + YF M+ E+ ++P ++H ++ +G+ G + +A+ I+
Sbjct: 430 AVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGY 489
Query: 405 NAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQL----ANLYASVGWWNQVA 460
+ V W +LL + ++ A ++E G + + L +NLYA W +V
Sbjct: 490 DGVAWRALLGACSARKDLKAAKTVAAK--MIELGDADKDEYLYIVMSNLYAYHERWREVG 547
Query: 461 RVRKLMKDKGLKPNPGSSWIEVKSKVHRF 489
++RK+M++ G+ GSSWI+ ++K +
Sbjct: 548 QIRKIMRESGVLKEVGSSWIDSRTKCSSY 576
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 112/197 (56%), Gaps = 5/197 (2%)
Query: 158 QYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEW 217
Q H GF++N + +SL+ Y DA++VF+EMP+ +V+SW ++++G+ Q
Sbjct: 76 QLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSG 135
Query: 218 RVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHS-YLHVD 276
R + LF + S++ PN F++T+ L+AC G H +++++G + V
Sbjct: 136 RFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVG 195
Query: 277 NALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVD 336
N LI MY KCG +DDA+ +F++M +D V+WN+++A +++G + + F +M +
Sbjct: 196 NCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQM----PN 251
Query: 337 PDAVTYLSLLSSCRHGG 353
PD VTY L+ + G
Sbjct: 252 PDTVTYNELIDAFVKSG 268
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 130/275 (47%), Gaps = 12/275 (4%)
Query: 205 SWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQI 264
SW+ I+ A+ + + L+ E KP+ LL G + R H +
Sbjct: 23 SWSTIVPALARFGSIGVLRAAVELINDGE-KPDASPLVHLLRVSGNYGYVSLCRQLHGYV 81
Query: 265 IQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAI 324
+ GF S + N+L+ Y ++DA +F+ M DV++WNS+++GY Q G QE I
Sbjct: 82 TKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGI 141
Query: 325 SLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQP-KLDHYSCIVDL 383
LF E+ + V P+ ++ + L++C L G + +V+ G++ + +C++D+
Sbjct: 142 CLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDM 201
Query: 384 LGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATL 443
G+ G + +A ++M + V W ++++S +G + +G+ + P + T
Sbjct: 202 YGKCGFMDDAVLVFQHMEE-KDTVSWNAIVASCSRNGKLELGLWFFHQ--MPNPD-TVTY 257
Query: 444 QQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSS 478
+L + + G +N +V M PNP SS
Sbjct: 258 NELIDAFVKSGDFNNAFQVLSDM------PNPNSS 286
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 156 GVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQ 215
G H A G + V V S+LI +YS+C + A +F MP +N++ W +I+G+A+
Sbjct: 339 GSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYAR 398
Query: 216 EWRVDMCLELFHLMRGSE-MKPNYFTYTSLLSACMGSGALGYGRGAHCQI---IQMGFHS 271
++LF+ ++ +KP+ FT+ +LL+ C +HC++ + +G+
Sbjct: 399 NGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVC-----------SHCEVPMEVMLGYFE 447
Query: 272 YL-----------HVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLA 320
+ H + + AM + V I E G D V W +++ +
Sbjct: 448 MMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDL 507
Query: 321 QEAISLFEEMIKQGVDPDAVTYLSLLSS 348
+ A ++ +MI+ G D D YL ++ S
Sbjct: 508 KAAKTVAAKMIELG-DADKDEYLYIVMS 534
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 140/256 (54%), Gaps = 24/256 (9%)
Query: 138 CFLSHAVSSCGSK-RDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFE 196
CF+ A+ +K RD+ + + G N+ +++IS Y+R A ++F+
Sbjct: 299 CFVKTALLDMHAKCRDIQSARR---IFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFD 355
Query: 197 EMPERNVVSWTAIIAGFAQEWRVDMCLELFH-LMRGSEMKPNYFTYTSLLSAC------- 248
MP+RNVVSW ++IAG+A + + +E F ++ + KP+ T S+LSAC
Sbjct: 356 TMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLE 415
Query: 249 MGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWN 308
+G + Y R ++ G+ S LI MY++ G + +A +F+ M RDVV++N
Sbjct: 416 LGDCIVDYIRKNQIKLNDSGYRS-------LIFMYARGGNLWEAKRVFDEMKERDVVSYN 468
Query: 309 SMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEH 368
++ +A +G E ++L +M +G++PD VTY S+L++C GL+KEGQ F S+
Sbjct: 469 TLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSI--- 525
Query: 369 GVQPKLDHYSCIVDLL 384
P DHY+C+ DLL
Sbjct: 526 -RNPLADHYACM-DLL 539
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 140/284 (49%), Gaps = 37/284 (13%)
Query: 178 LISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPN 237
+I+ +++ +A + F+ MPE++VVSW A+++G+AQ + L LF+ M ++PN
Sbjct: 204 MITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPN 263
Query: 238 YFTYTSLLSACMGSGALGYGRG------------------------AHCQIIQ------- 266
T+ ++SAC R A C+ IQ
Sbjct: 264 ETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFN 323
Query: 267 -MGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAIS 325
+G L NA+I+ Y++ G + A +F+ M R+VV+WNS+IAGYA +G A AI
Sbjct: 324 ELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIE 383
Query: 326 LFEEMIKQG-VDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLL 384
FE+MI G PD VT +S+LS+C H ++ G + + ++ ++ Y ++ +
Sbjct: 384 FFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMY 443
Query: 385 GRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEA 428
R G + EA+ + M + V + +L ++ +G+ G+E
Sbjct: 444 ARGGNLWEAKRVFDEMKE-RDVVSYNTLFTAFAANGD---GVET 483
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 130/307 (42%), Gaps = 72/307 (23%)
Query: 156 GVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQ 215
G+ + L GF + YV + ++ +Y + A +VF+++ +R W +I+G+ +
Sbjct: 120 GILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWK 179
Query: 216 EWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHV 275
+ +LF +M +++ ++T +++
Sbjct: 180 WGNKEEACKLFDMMPENDV----VSWTVMITG---------------------------- 207
Query: 276 DNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGV 335
++K +++A F+ M + VV+WN+M++GYAQ+G ++A+ LF +M++ GV
Sbjct: 208 -------FAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGV 260
Query: 336 DPDAVTYLSLLSSCRHGG----------LVKEGQVYFNSMV------------------- 366
P+ T++ ++S+C L+ E +V N V
Sbjct: 261 RPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARR 320
Query: 367 ---EHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNVW 423
E G Q L ++ ++ R G + AR + MP N V W SL++ +G
Sbjct: 321 IFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPK-RNVVSWNSLIAGYAHNGQAA 379
Query: 424 IGIEAAE 430
+ IE E
Sbjct: 380 LAIEFFE 386
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 107/253 (42%), Gaps = 17/253 (6%)
Query: 173 YVGSSLISLYSRCALSGDAYR-VFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRG 231
Y S +IS +R R +F+ + NV ++ F++ + L L+
Sbjct: 40 YWASRIISCCTRLRAPSYYTRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSR 99
Query: 232 SEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDD 291
+ P+ F++ ++ + G L + ++GF +V N ++ MY K ++
Sbjct: 100 CGIMPDAFSFPVVIKSAGRFGIL-----FQALVEKLGFFKDPYVRNVIMDMYVKHESVES 154
Query: 292 ALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRH 351
A +F+ + R WN MI+GY + G +EA LF+ M + D V++ +++
Sbjct: 155 ARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPEN----DVVSWTVMITGFAK 210
Query: 352 GGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENM---PVCPNAVI 408
++ + YF+ M E V ++ ++ + G +A +M V PN
Sbjct: 211 VKDLENARKYFDRMPEKSVV----SWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETT 266
Query: 409 WGSLLSSSRLHGN 421
W ++S+ +
Sbjct: 267 WVIVISACSFRAD 279
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 113/188 (60%), Gaps = 1/188 (0%)
Query: 236 PNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYI 295
P+ + L +C +L + + H +Q F ++N +I+M+ +C I DA +
Sbjct: 234 PDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRV 293
Query: 296 FENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLV 355
F++MV +D+ +W+ M+ Y+ +G+ +A+ LFEEM K G+ P+ T+L++ +C G +
Sbjct: 294 FDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGI 353
Query: 356 KEGQVYFNSMV-EHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLS 414
+E ++F+SM EHG+ PK +HY ++ +LG+ G + EA +I ++P P A W ++ +
Sbjct: 354 EEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRN 413
Query: 415 SSRLHGNV 422
+RLHG++
Sbjct: 414 YARLHGDI 421
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 54/109 (49%)
Query: 146 SCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVS 205
SC + + L + H + + F + + + +IS++ C+ DA RVF+ M ++++ S
Sbjct: 245 SCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDS 304
Query: 206 WTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGAL 254
W ++ ++ D L LF M +KPN T+ ++ AC G +
Sbjct: 305 WHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGI 353
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 108/195 (55%), Gaps = 1/195 (0%)
Query: 244 LLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRD 303
L C + L + H +I H L ++ L+ MYS CG+ ++A +FE M ++
Sbjct: 260 LAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKN 319
Query: 304 VVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFN 363
+ TW +I +A++G ++AI +F ++G PD + + +C G V EG ++F
Sbjct: 320 LETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFE 379
Query: 364 SMV-EHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNV 422
SM ++G+ P ++ Y +V++ G + EA +F+E MP+ PN +W +L++ SR+HGN+
Sbjct: 380 SMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNL 439
Query: 423 WIGIEAAESRLLLEP 437
+G AE L+P
Sbjct: 440 ELGDYCAEVVEFLDP 454
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 14/192 (7%)
Query: 135 VDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSS--LISLYSRCALSGDAY 192
VD+ L CG L H + ++++ + S+ L+ +YS C L+ +A
Sbjct: 252 VDLSRLLRLAKICGEAEGLQEAKTVH--GKISASVSHLDLSSNHVLLEMYSNCGLANEAA 309
Query: 193 RVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSAC---- 248
VFE+M E+N+ +W II FA+ + +++F + P+ + + AC
Sbjct: 310 SVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLG 369
Query: 249 -MGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM-VGRDVVT 306
+ G L + + I Y+ +L+ MY+ G +D+AL E M + +V
Sbjct: 370 DVDEGLLHFESMSRDYGIAPSIEDYV----SLVEMYALPGFLDEALEFVERMPMEPNVDV 425
Query: 307 WNSMIAGYAQHG 318
W +++ HG
Sbjct: 426 WETLMNLSRVHG 437
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 102/188 (54%), Gaps = 1/188 (0%)
Query: 244 LLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRD 303
L C AL R H II + + NA+I MYS C +DDAL +FE M +
Sbjct: 125 LAKLCGKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWN 184
Query: 304 VVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFN 363
T M+ + +G +EAI LF ++G P+ + + S+C G VKEG + F
Sbjct: 185 SGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQ 244
Query: 364 SMV-EHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNV 422
+M E+G+ P ++HY + +L +G + EA +F+E MP+ P+ +W +L++ SR+HG+V
Sbjct: 245 AMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDV 304
Query: 423 WIGIEAAE 430
+G AE
Sbjct: 305 ELGDRCAE 312
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 78/195 (40%), Gaps = 5/195 (2%)
Query: 147 CGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSW 206
CG L H I +V +++I +YS C DA +VFEEMPE N +
Sbjct: 129 CGKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTL 188
Query: 207 TAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGR-GAHCQII 265
++ F + ++LF + KPN + + S C +G + G
Sbjct: 189 CVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYR 248
Query: 266 QMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM-VGRDVVTWNSMIAGYAQHG---LAQ 321
+ G + +++ M + G +D+AL E M + V W +++ HG L
Sbjct: 249 EYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGD 308
Query: 322 EAISLFEEMIKQGVD 336
L E++ +D
Sbjct: 309 RCAELVEKLDATRLD 323
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 148/325 (45%), Gaps = 21/325 (6%)
Query: 167 GFIANVYVGSSLISLYSRCALSGDAYRVFEEMPER----NVVSWTAIIAGFAQ---EWRV 219
GF +VY +SLIS ++ +A VF++M E ++++ I+ F + W
Sbjct: 203 GFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPW-- 260
Query: 220 DMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVD-NA 278
+ L M+ + P+ +TY +L++ C G+L + ++ SY V NA
Sbjct: 261 NKITSLVEKMKSDGIAPDAYTYNTLITCCK-RGSLHQEAAQVFEEMKAAGFSYDKVTYNA 319
Query: 279 LIAMYSKCGVIDDALYIFENMV----GRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQG 334
L+ +Y K +A+ + MV +VT+NS+I+ YA+ G+ EA+ L +M ++G
Sbjct: 320 LLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKG 379
Query: 335 VDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREAR 394
PD TY +LLS G V+ F M G +P + ++ + + G G E
Sbjct: 380 TKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMM 439
Query: 395 DFIENMPVC---PNAVIWGSLLSSSRLHG--NVWIGIEAAESRLLLEPGCSATLQQLANL 449
+ + VC P+ V W +LL+ +G + G+ R P T L +
Sbjct: 440 KIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPE-RETFNTLISA 498
Query: 450 YASVGWWNQVARVRKLMKDKGLKPN 474
Y+ G + Q V + M D G+ P+
Sbjct: 499 YSRCGSFEQAMTVYRRMLDAGVTPD 523
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 153/321 (47%), Gaps = 14/321 (4%)
Query: 167 GFIANVYVGSSLISLYSRCALSGDAYRVFEEMP----ERNVVSWTAIIAGFAQEWRVDMC 222
GF + ++L+ +Y + +A +V EM ++V++ ++I+ +A++ +D
Sbjct: 309 GFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEA 368
Query: 223 LELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAM 282
+EL + M KP+ FTYT+LLS +G + ++ G + NA I M
Sbjct: 369 MELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKM 428
Query: 283 YSKCGVIDDALYIFENM----VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPD 338
Y G + + IF+ + + D+VTWN+++A + Q+G+ E +F+EM + G P+
Sbjct: 429 YGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPE 488
Query: 339 AVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIE 398
T+ +L+S+ G ++ + M++ GV P L Y+ ++ L R G+ ++ +
Sbjct: 489 RETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLA 548
Query: 399 NMP---VCPNAVIWGSLLSSSRLHGNVWIGIEAAESRL--LLEPGCSATLQQLANLYASV 453
M PN + + SLL + + + AE ++EP + L+ L + +
Sbjct: 549 EMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPR-AVLLKTLVLVCSKC 607
Query: 454 GWWNQVARVRKLMKDKGLKPN 474
+ R +K++G P+
Sbjct: 608 DLLPEAERAFSELKERGFSPD 628
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 124/291 (42%), Gaps = 15/291 (5%)
Query: 195 FEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGAL 254
++ M + +VV+ II+ +E RV +F+ ++ + ++YTSL+SA SG
Sbjct: 167 YQSMLDNSVVA--IIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRY 224
Query: 255 GYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVI-DDALYIFENM----VGRDVVTWNS 309
++ + G L N ++ ++ K G + + E M + D T+N+
Sbjct: 225 REAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNT 284
Query: 310 MIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHG 369
+I + L QEA +FEEM G D VTY +LL KE N MV +G
Sbjct: 285 LITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNG 344
Query: 370 VQPKLDHYSCIVDLLGRAGLIREARDFIENMP---VCPNAVIWGSLLSSSRLHGNVWIGI 426
P + Y+ ++ R G++ EA + M P+ + +LLS G V +
Sbjct: 345 FSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAM 404
Query: 427 EAAESRLLLEPGCSA---TLQQLANLYASVGWWNQVARVRKLMKDKGLKPN 474
E + GC T +Y + G + ++ ++ + GL P+
Sbjct: 405 SIFEE--MRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPD 453
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/331 (20%), Positives = 134/331 (40%), Gaps = 81/331 (24%)
Query: 164 ITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPER----NVVSWTAIIAGFAQEWRV 219
+ GF ++ +SLIS Y+R + +A + +M E+ +V ++T +++GF + +V
Sbjct: 341 VLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKV 400
Query: 220 DMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALG------------------------ 255
+ + +F MR + KPN T+ + + G
Sbjct: 401 ESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTL 460
Query: 256 ---YGR--------GAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM----V 300
+G+ G ++ + GF N LI+ YS+CG + A+ ++ M V
Sbjct: 461 LAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGV 520
Query: 301 GRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSS------------ 348
D+ T+N+++A A+ G+ +++ + EM P+ +TY SLL +
Sbjct: 521 TPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHS 580
Query: 349 -----------------------CRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLG 385
C L+ E + F+ + E G P + + +V + G
Sbjct: 581 LAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYG 640
Query: 386 RAGLIREAR---DFIENMPVCPNAVIWGSLL 413
R ++ +A D+++ P+ + SL+
Sbjct: 641 RRQMVAKANGVLDYMKERGFTPSMATYNSLM 671
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 100/228 (43%), Gaps = 35/228 (15%)
Query: 177 SLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKP 236
+L+ + S+C L +A R F E+ ER GF+ P
Sbjct: 599 TLVLVCSKCDLLPEAERAFSELKER----------GFS---------------------P 627
Query: 237 NYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIF 296
+ T S++S + G + + GF + N+L+ M+S+ + I
Sbjct: 628 DITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEIL 687
Query: 297 ENMVGR----DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHG 352
++ + D++++N++I Y ++ ++A +F EM G+ PD +TY + + S
Sbjct: 688 REILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAAD 747
Query: 353 GLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENM 400
+ +E M++HG +P + Y+ IVD + EA+ F+E++
Sbjct: 748 SMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/319 (19%), Positives = 123/319 (38%), Gaps = 45/319 (14%)
Query: 167 GFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVV----SWTAIIAGFAQEWRVDMC 222
GF+ ++LIS YSRC A V+ M + V ++ ++A A+ +
Sbjct: 484 GFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQS 543
Query: 223 LELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAM 282
++ M KPN TY SLL A Y G ++ HS
Sbjct: 544 EKVLAEMEDGRCKPNELTYCSLLHA--------YANGKEIGLM----HSL---------- 581
Query: 283 YSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTY 342
A ++ ++ V +++ ++ L EA F E+ ++G PD T
Sbjct: 582 ---------AEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTL 632
Query: 343 LSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENM-- 400
S++S +V + + M E G P + Y+ ++ + R+ ++ + + +
Sbjct: 633 NSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILA 692
Query: 401 -PVCPNAVIWGSLL----SSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGW 455
+ P+ + + +++ ++R+ I E S ++ + T YA+
Sbjct: 693 KGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPD---VITYNTFIGSYAADSM 749
Query: 456 WNQVARVRKLMKDKGLKPN 474
+ + V + M G +PN
Sbjct: 750 FEEAIGVVRYMIKHGCRPN 768
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 148/360 (41%), Gaps = 52/360 (14%)
Query: 168 FIANVYVGSSLISLYSRCALSGDAYRVFEEM----PERNVVSWTAIIAGFAQ---EWRVD 220
++ +V ++++ YSR A +FE M P +V++ I+ F + WR
Sbjct: 206 YLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWR-- 263
Query: 221 MCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALI 280
L + MR +K + FT +++LSAC G L + ++ G+ NAL+
Sbjct: 264 KILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALL 323
Query: 281 AMYSKCGVIDDALYIF----ENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVD 336
++ K GV +AL + EN D VT+N ++A Y + G ++EA + E M K+GV
Sbjct: 324 QVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVM 383
Query: 337 PDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDF 396
P+A+TY +++ + G E F SM E G P Y+ ++ LLG+ E
Sbjct: 384 PNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKM 443
Query: 397 IENMP---VCPNAVIWGSLLS------------------------SSRLHGNVWI----- 424
+ +M PN W ++L+ R N I
Sbjct: 444 LCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGR 503
Query: 425 -GIEAAESRLLLE------PGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGS 477
G E S++ E C T L N A G W V MK KG KP S
Sbjct: 504 CGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETS 563
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 4/179 (2%)
Query: 226 FHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMY-- 283
F L + KP+ + S+LS + G I + G L N+L+ MY
Sbjct: 619 FTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVR 678
Query: 284 -SKCGVIDDALYIFE-NMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVT 341
+C ++ L E + + D+V++N++I G+ + GL QEA+ + EM ++G+ P T
Sbjct: 679 RGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFT 738
Query: 342 YLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENM 400
Y + +S G+ E + M ++ +P + +VD RAG EA DF+ +
Sbjct: 739 YNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI 797
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 17/204 (8%)
Query: 281 AMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAV 340
+ YS + D + + E ++ DV + +++ Y++ G ++AI LFE M + G P V
Sbjct: 189 SQYSVAAKLLDKIPLQEYLL--DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLV 246
Query: 341 TYLSLLSS-CRHGGLVKEGQVYFNSMVEHGVQPKLDHYSC--IVDLLGRAGLIREARDFI 397
TY +L + G ++ + M G+ K D ++C ++ R GL+REA++F
Sbjct: 247 TYNVILDVFGKMGRSWRKILGVLDEMRSKGL--KFDEFTCSTVLSACAREGLLREAKEFF 304
Query: 398 ENMPVC---PNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLE----PGCSATLQQLANLY 450
+ C P V + +LL ++ G + EA +E P S T +L Y
Sbjct: 305 AELKSCGYEPGTVTYNALL---QVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAY 361
Query: 451 ASVGWWNQVARVRKLMKDKGLKPN 474
G+ + A V ++M KG+ PN
Sbjct: 362 VRAGFSKEAAGVIEMMTKKGVMPN 385
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 112/263 (42%), Gaps = 39/263 (14%)
Query: 178 LISLYSRCALSGDAYRVFEEMPER----NVVSWTAIIAGFAQEWRVDMCLELFHLMRGSE 233
L++ Y R S +A V E M ++ N +++T +I + + + D L+LF+ M+ +
Sbjct: 357 LVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAG 416
Query: 234 MKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDAL 293
PN TY ++LS LG + ++I+M L M S
Sbjct: 417 CVPNTCTYNAVLSL------LG-KKSRSNEMIKM-----------LCDMKS--------- 449
Query: 294 YIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGG 353
N + TWN+M+A G+ + +F EM G +PD T+ +L+S+ G
Sbjct: 450 ----NGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCG 505
Query: 354 LVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMP---VCPNAVIWG 410
+ + M G + Y+ +++ L R G R + I +M P +
Sbjct: 506 SEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYS 565
Query: 411 SLLSSSRLHGNVWIGIEAAESRL 433
+L GN ++GIE E+R+
Sbjct: 566 LMLQCYAKGGN-YLGIERIENRI 587
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 123/249 (49%), Gaps = 39/249 (15%)
Query: 277 NALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVD 336
N++I MYS CG ++DAL +F +M R++ TW +I +A++G ++AI F ++G
Sbjct: 220 NSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNK 279
Query: 337 PDAVTYLSLLSSCRHGGLVKEGQVYFNSMV-EHGVQPKLDHYSCIVDLLGRAGLIREARD 395
PD + + +C G + EG ++F SM E+G+ P ++HY +V +L G + EA
Sbjct: 280 PDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALR 339
Query: 396 FIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGW 455
F+E+M PN +W +L++ SR+HG+ L+L C ++QL
Sbjct: 340 FVESME--PNVDLWETLMNLSRVHGD-----------LILGDRCQDMVEQL--------- 377
Query: 456 WNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHR-----------FEAQDKSNRRMSDILL 504
+R+ K K GL P S VK K+ R A D S ++ +
Sbjct: 378 --DASRLNKESK-AGLVPVKSSDL--VKEKLQRMAKGPNYGIRYMAAGDISRPENRELYM 432
Query: 505 VIDSLVDHM 513
+ SL +HM
Sbjct: 433 ALKSLKEHM 441
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 81/174 (46%), Gaps = 4/174 (2%)
Query: 147 CGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVVSW 206
CG + L H ++ I+++ +S+I +YS C DA VF MPERN+ +W
Sbjct: 191 CGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETW 250
Query: 207 TAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQII- 265
+I FA+ + + ++ F + KP+ + + AC G + G H + +
Sbjct: 251 CGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGL-LHFESMY 309
Query: 266 -QMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHG 318
+ G + +L+ M ++ G +D+AL E+M +V W +++ HG
Sbjct: 310 KEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESME-PNVDLWETLMNLSRVHG 362
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 146/307 (47%), Gaps = 22/307 (7%)
Query: 126 SSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAI------TTGFIANVYVGSSLI 179
+S+ E L ++ + + +CG GG+++ +A G + +SL+
Sbjct: 292 NSMKEYGLRPNLVTYNAVIDACG-----KGGMEFKQVAKFFDEMQRNGVQPDRITFNSLL 346
Query: 180 SLYSRCALSGDAYRVFEEMP----ERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMK 235
++ SR L A +F+EM E++V S+ ++ + ++D+ E+ M +
Sbjct: 347 AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIM 406
Query: 236 PNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYI 295
PN +Y++++ +G ++ +G N L+++Y+K G ++AL I
Sbjct: 407 PNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDI 466
Query: 296 FENM----VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRH 351
M + +DVVT+N+++ GY + G E +F EM ++ V P+ +TY +L+
Sbjct: 467 LREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSK 526
Query: 352 GGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMP---VCPNAVI 408
GGL KE F G++ + YS ++D L + GL+ A I+ M + PN V
Sbjct: 527 GGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVT 586
Query: 409 WGSLLSS 415
+ S++ +
Sbjct: 587 YNSIIDA 593
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 106/214 (49%), Gaps = 8/214 (3%)
Query: 191 AYRVFEEMPER----NVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLS 246
A+ + +MP + NVVS++ +I GFA+ R D L LF MR + + +Y +LLS
Sbjct: 393 AFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLS 452
Query: 247 ACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM----VGR 302
G ++ +G + NAL+ Y K G D+ +F M V
Sbjct: 453 IYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLP 512
Query: 303 DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYF 362
+++T++++I GY++ GL +EA+ +F E G+ D V Y +L+ + GLV
Sbjct: 513 NLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLI 572
Query: 363 NSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDF 396
+ M + G+ P + Y+ I+D GR+ + + D+
Sbjct: 573 DEMTKEGISPNVVTYNSIIDAFGRSATMDRSADY 606
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 107/216 (49%), Gaps = 9/216 (4%)
Query: 268 GFHSYLHVDNALIAMYSKCGVIDDALYIFENM----VGRDVVTWNSMIAGYAQHGLA-QE 322
G+ + ++ +ALI+ Y + G+ ++A+ +F +M + ++VT+N++I + G+ ++
Sbjct: 263 GYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQ 322
Query: 323 AISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVD 382
F+EM + GV PD +T+ SLL+ C GGL + + F+ M ++ + Y+ ++D
Sbjct: 323 VAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLD 382
Query: 383 LLGRAGLIREARDFIENMPV---CPNAVIWGSLLSSSRLHGNVWIGIEA-AESRLLLEPG 438
+ + G + A + + MPV PN V + +++ G + E R L
Sbjct: 383 AICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIAL 442
Query: 439 CSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPN 474
+ L ++Y VG + + + M G+K +
Sbjct: 443 DRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKD 478
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 142/330 (43%), Gaps = 53/330 (16%)
Query: 134 GVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVY--VGSSLISLYSRCALSGDA 191
G D C ++ + G++ + + V ++ A+ N + S++IS R A
Sbjct: 195 GSDDC--TYIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIA 252
Query: 192 YRVFEEMPE----RNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSA 247
R+FE V +++A+I+ + + + + +F+ M+ ++PN TY +++ A
Sbjct: 253 KRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA 312
Query: 248 CMGSGALGYGRGAHC--QIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGR--- 302
C G G + + + A ++ + G N+L+A+ S+ G+ + A +F+ M R
Sbjct: 313 C-GKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIE 371
Query: 303 ------------------------------------DVVTWNSMIAGYAQHGLAQEAISL 326
+VV+++++I G+A+ G EA++L
Sbjct: 372 QDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNL 431
Query: 327 FEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGR 386
F EM G+ D V+Y +LLS G +E M G++ + Y+ ++ G+
Sbjct: 432 FGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGK 491
Query: 387 AGLIREARDFIENMP---VCPNAVIWGSLL 413
G E + M V PN + + +L+
Sbjct: 492 QGKYDEVKKVFTEMKREHVLPNLLTYSTLI 521
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 91/196 (46%), Gaps = 43/196 (21%)
Query: 176 SSLISLYSRCALSGDAYRVFEEMP----ERNVVSWTAIIAGFAQEWRVDMCLELFHLMRG 231
++L+S+Y++ S +A + EM +++VV++ A++ G+ ++ + D ++F M+
Sbjct: 448 NTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKR 507
Query: 232 SEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDD 291
+ PN TY++L+ YSK G+ +
Sbjct: 508 EHVLPNLLTYSTLIDG-----------------------------------YSKGGLYKE 532
Query: 292 ALYIFENM----VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLS 347
A+ IF + DVV ++++I ++GL A+SL +EM K+G+ P+ VTY S++
Sbjct: 533 AMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIID 592
Query: 348 SCRHGGLVKEGQVYFN 363
+ + Y N
Sbjct: 593 AFGRSATMDRSADYSN 608
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 137/286 (47%), Gaps = 13/286 (4%)
Query: 212 GFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHS 271
++ ++ LE+ ++ ++ L C AL R H I + S
Sbjct: 86 ALCKQVKIREALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCITPLDARS 145
Query: 272 YLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMI 331
Y + +I MYS C DDAL +F M R+ TW +MI A++G + AI +F I
Sbjct: 146 Y----HTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFI 201
Query: 332 KQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMV-EHGVQPKLDHYSCIVDLLGRAGLI 390
++G PD + ++ +C G + EG ++F SM ++G+ ++ Y ++++L G +
Sbjct: 202 EEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHL 261
Query: 391 REARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLY 450
EA DF+E M V P+ +W +L++ + G + +G AE L+ + + A L
Sbjct: 262 DEALDFVERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDAS-RMSKESNAGLV 320
Query: 451 ASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSN 496
A+ + + ++++L + ++ +P K ++H F A D S+
Sbjct: 321 AAKASDSAMEKLKELRYCQMIRDDP-------KKRMHEFRAGDTSH 359
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 15/165 (9%)
Query: 177 SLISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKP 236
++I +YS C + DA VF EMP+RN +W +I A+ + +++F KP
Sbjct: 148 TVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKP 207
Query: 237 NYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDN--ALIAMYSKCGVIDDALY 294
+ + ++ AC+ G + G H + + + L +++ +I M + CG +D+AL
Sbjct: 208 DKEIFKAVFFACVSIGDINEGL-LHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALD 266
Query: 295 IFENM-VGRDVVTWNSM-----IAGYAQHGLAQEAISLFEEMIKQ 333
E M V V W ++ + GY + G F E+IK+
Sbjct: 267 FVERMTVEPSVEMWETLMNLCWVQGYLELG------DRFAELIKK 305
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 153/324 (47%), Gaps = 20/324 (6%)
Query: 167 GFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV----VSWTAIIAGFAQEWRVDMC 222
GF+ NV + +++I+ + +A VF M ++ + V++ +I+G + R
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 223 LELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAM 282
L M ++ PN +T+L+ + G L R + ++I+ + N+LI
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298
Query: 283 YSKCGVIDDALYIFENMVGR----DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPD 338
+ G + DA Y+F+ MV + DVVT+N++I G+ + ++ + LF EM QG+ D
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 358
Query: 339 AVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIE 398
A TY +L+ G + Q FN MV+ GV P + Y+ ++D L G I +A +E
Sbjct: 359 AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 418
Query: 399 NMP--------VCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLY 450
++ + N +I G L + +L W + +R ++P A + ++ L
Sbjct: 419 DLQKSEMDVDIITYNIIIQG-LCRTDKLK-EAWCLFRSL-TRKGVKPDAIAYITMISGL- 474
Query: 451 ASVGWWNQVARVRKLMKDKGLKPN 474
G + ++ + MK+ G P+
Sbjct: 475 CRKGLQREADKLCRRMKEDGFMPS 498
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 147/327 (44%), Gaps = 28/327 (8%)
Query: 68 NKELANALRILNLVSPKKSASDIENRRSHLRLIEDMLENSVINHVGSNLATLKTTTEMSS 127
N++L NAL + + K +D + N++I+ + ++ +
Sbjct: 197 NRDLNNALEVFYCMEKKGIRADA------------VTYNTLISGLSNSGRWTDAARLLRD 244
Query: 128 VMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCAL 187
++++++ +V F + + + + +L + I + NV+ +SLI+ +
Sbjct: 245 MVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGC 304
Query: 188 SGDAYRVFEEMPER----NVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTS 243
GDA +F+ M + +VV++ +I GF + RV+ ++LF M + + FTY +
Sbjct: 305 LGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNT 364
Query: 244 LLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM---- 299
L+ +G L + +++ G + N L+ G I+ AL + E++
Sbjct: 365 LIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSE 424
Query: 300 VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQ 359
+ D++T+N +I G + +EA LF + ++GV PDA+ Y++++S GL +E
Sbjct: 425 MDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREAD 484
Query: 360 VYFNSMVEHGVQPK--------LDHYS 378
M E G P DHY+
Sbjct: 485 KLCRRMKEDGFMPSERIYDETLRDHYT 511
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 132/288 (45%), Gaps = 36/288 (12%)
Query: 150 KRDLNGGVQYHCLAITTGF---------------IANVYVGSSLISLYSRCALSGDAYRV 194
K ++ + +H L + GF + + V S L+SL C
Sbjct: 230 KGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCG-------- 281
Query: 195 FEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGAL 254
P NVV++ +I GF + +D +LF +M ++P+ Y++L+ +G L
Sbjct: 282 ----PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGML 337
Query: 255 GYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM----VGRDVVTWNSM 310
G G Q + G + V ++ I +Y K G + A +++ M + +VVT+ +
Sbjct: 338 GMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTIL 397
Query: 311 IAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSS-CRHGGLVKEGQVYFNSMVEHG 369
I G Q G EA ++ +++K+G++P VTY SL+ C+ G L + G + M++ G
Sbjct: 398 IKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNL-RSGFALYEDMIKMG 456
Query: 370 VQPKLDHYSCIVDLLGRAGLIREARDFIENM---PVCPNAVIWGSLLS 414
P + Y +VD L + GL+ A F M + N V++ SL+
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLID 504
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 109/228 (47%), Gaps = 8/228 (3%)
Query: 163 AITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEM----PERNVVSWTAIIAGFAQEWR 218
A+ G +V V SS I +Y + A V++ M NVV++T +I G Q+ R
Sbjct: 347 ALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGR 406
Query: 219 VDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNA 278
+ ++ + M+P+ TY+SL+ G L G + +I+MG+ + +
Sbjct: 407 IYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGV 466
Query: 279 LIAMYSKCGVIDDALYIFENMVGR----DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQG 334
L+ SK G++ A+ M+G+ +VV +NS+I G+ + EA+ +F M G
Sbjct: 467 LVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYG 526
Query: 335 VDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVD 382
+ PD T+ +++ G ++E F M + G++P Y ++D
Sbjct: 527 IKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLID 574
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 106/241 (43%), Gaps = 18/241 (7%)
Query: 156 GVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVF----EEMPERNVVSWTAIIA 211
G+Q L A++ V + +I L +C DA + F E E ++V++ +I
Sbjct: 585 GLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMIC 644
Query: 212 GFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHS 271
G+ R+D +F L++ + PN T T L+ + + + + G
Sbjct: 645 GYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKP 704
Query: 272 YLHVDNALIAMYSKCGVIDDALYIFENM----VGRDVVTWNSMIAGYAQHGLAQEAISLF 327
L+ +SK I+ + +FE M + +V+++ +I G + G EA ++F
Sbjct: 705 NAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIF 764
Query: 328 EEMIKQGVDPDAVTYLSLLSS-CRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGR 386
+ I + PD V Y L+ C+ G LV E + + M+ +GV+P DLL R
Sbjct: 765 HQAIDAKLLPDVVAYAILIRGYCKVGRLV-EAALLYEHMLRNGVKPD--------DLLQR 815
Query: 387 A 387
A
Sbjct: 816 A 816
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 132/288 (45%), Gaps = 36/288 (12%)
Query: 150 KRDLNGGVQYHCLAITTGF---------------IANVYVGSSLISLYSRCALSGDAYRV 194
K ++ + +H L + GF + + V S L+SL C
Sbjct: 230 KGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCG-------- 281
Query: 195 FEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGAL 254
P NVV++ +I GF + +D +LF +M ++P+ Y++L+ +G L
Sbjct: 282 ----PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGML 337
Query: 255 GYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM----VGRDVVTWNSM 310
G G Q + G + V ++ I +Y K G + A +++ M + +VVT+ +
Sbjct: 338 GMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTIL 397
Query: 311 IAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSS-CRHGGLVKEGQVYFNSMVEHG 369
I G Q G EA ++ +++K+G++P VTY SL+ C+ G L + G + M++ G
Sbjct: 398 IKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNL-RSGFALYEDMIKMG 456
Query: 370 VQPKLDHYSCIVDLLGRAGLIREARDFIENM---PVCPNAVIWGSLLS 414
P + Y +VD L + GL+ A F M + N V++ SL+
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLID 504
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 152/339 (44%), Gaps = 36/339 (10%)
Query: 163 AITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEM----PERNVVSWTAIIAGFAQEWR 218
A+ G +V V SS I +Y + A V++ M NVV++T +I G Q+ R
Sbjct: 347 ALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGR 406
Query: 219 VDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNA 278
+ ++ + M+P+ TY+SL+ G L G + +I+MG+ + +
Sbjct: 407 IYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGV 466
Query: 279 LIAMYSKCGVIDDALYIFENMVGR----DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQG 334
L+ SK G++ A+ M+G+ +VV +NS+I G+ + EA+ +F M G
Sbjct: 467 LVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYG 526
Query: 335 VDPDAVTYLSLL-------SSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRA 387
+ PD T+ +++ + C+H Q+ F+ M + + + + ++ LL +
Sbjct: 527 IKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQL-FDLMQRNKISADIAVCNVVIHLLFKC 585
Query: 388 GLIREARDFIENM---PVCPNAVIWGSLL----SSSRLHGNVWIGIEAAESRLLLE---- 436
I +A F N+ + P+ V + +++ S RL EA LL+
Sbjct: 586 HRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLD-------EAERIFELLKVTPF 638
Query: 437 -PGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPN 474
P + TL L ++ + R+ +M +KG KPN
Sbjct: 639 GPN-TVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPN 676
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 106/241 (43%), Gaps = 18/241 (7%)
Query: 156 GVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVF----EEMPERNVVSWTAIIA 211
G+Q L A++ V + +I L +C DA + F E E ++V++ +I
Sbjct: 556 GLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMIC 615
Query: 212 GFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHS 271
G+ R+D +F L++ + PN T T L+ + + + + G
Sbjct: 616 GYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKP 675
Query: 272 YLHVDNALIAMYSKCGVIDDALYIFENM----VGRDVVTWNSMIAGYAQHGLAQEAISLF 327
L+ +SK I+ + +FE M + +V+++ +I G + G EA ++F
Sbjct: 676 NAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIF 735
Query: 328 EEMIKQGVDPDAVTYLSLLSS-CRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGR 386
+ I + PD V Y L+ C+ G LV E + + M+ +GV+P DLL R
Sbjct: 736 HQAIDAKLLPDVVAYAILIRGYCKVGRLV-EAALLYEHMLRNGVKPD--------DLLQR 786
Query: 387 A 387
A
Sbjct: 787 A 787
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 129/272 (47%), Gaps = 11/272 (4%)
Query: 162 LAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPER----NVVSWTAIIAGFAQEW 217
L + GF NVY + L+ R G A + EM +V S+ +I GF +
Sbjct: 132 LMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGK 191
Query: 218 RVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDN 277
++ LEL + M+GS + T+ L+ A +G + G ++ MG + L V
Sbjct: 192 ELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYT 251
Query: 278 ALIAMYSKCGVIDDALYIFENMVGRD----VVTWNSMIAGYAQHGLAQEAISLFEEMIKQ 333
+LI + CG +D +F+ ++ R +T+N++I G+ + G +EA +FE MI++
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIER 311
Query: 334 GVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREA 393
GV P+ TY L+ G KE N M+E +P Y+ I++ L + GL+ +A
Sbjct: 312 GVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADA 371
Query: 394 RDFIENMP---VCPNAVIWGSLLSSSRLHGNV 422
+ +E M P+ + + LL G++
Sbjct: 372 VEIVELMKKRRTRPDNITYNILLGGLCAKGDL 403
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 141/332 (42%), Gaps = 28/332 (8%)
Query: 164 ITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPER----NVVSWTAIIAGFAQEWRV 219
I G NVY + LI + +A ++ M E+ N V++ II ++ V
Sbjct: 309 IERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLV 368
Query: 220 DMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVD--- 276
+E+ LM+ +P+ TY LL G L + + + SY D
Sbjct: 369 ADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDL--DEASKLLYLMLKDSSYTDPDVIS 426
Query: 277 -NALIAMYSKCGVIDDALYIFENMVGR----DVVTWNSMIAGYAQHGLAQEAISLFEEMI 331
NALI K + AL I++ +V + D VT N ++ + G +A+ L++++
Sbjct: 427 YNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQIS 486
Query: 332 KQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIR 391
+ ++ TY +++ G++ + M +QP + Y+C++ L + G +
Sbjct: 487 DSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLD 546
Query: 392 EARDFIENMPV---CPNAVIWGSLLSSSRLHGNVWIGIEAAESRLL------LEPGCSAT 442
+A E M P+ V + ++ S G+ I++AES L+ L P T
Sbjct: 547 QAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGD----IKSAESLLVGMSRAGLSPDL-FT 601
Query: 443 LQQLANLYASVGWWNQVARVRKLMKDKGLKPN 474
+L N + +G+ ++ M D G +P+
Sbjct: 602 YSKLINRFLKLGYLDEAISFFDKMVDSGFEPD 633
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 135/298 (45%), Gaps = 15/298 (5%)
Query: 191 AYRVFEEMP----ERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLS 246
A RVFE M + ++V++ +I G+ + + +E M + + TY +++
Sbjct: 241 AERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQ 300
Query: 247 ACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGR---- 302
AC G + ++ + G H + +I K G +++ +FENM+ +
Sbjct: 301 ACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKP 360
Query: 303 DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYF 362
+V + +I GYA+ G ++AI L MI +G PD VTY +++ G V+E YF
Sbjct: 361 NVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYF 420
Query: 363 NSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMP---VCPNAVIWGSLLSSSRLH 419
++ G+ YS ++D LG+AG + EA E M ++ + +L+ + H
Sbjct: 421 HTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKH 480
Query: 420 GNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKL---MKDKGLKPN 474
V I A R+ E GC T+ L + + ++ KL M DKG+ P
Sbjct: 481 RKVDEAI-ALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPT 537
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 107/232 (46%), Gaps = 19/232 (8%)
Query: 190 DAYRVFEEMPER----NVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLL 245
+ Y VFE M + NV +T +I G+A+ V+ + L H M KP+ TY+ ++
Sbjct: 345 EGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVV 404
Query: 246 SACMGSG----ALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM-- 299
+ +G AL Y C+ + +S + ++LI K G +D+A +FE M
Sbjct: 405 NGLCKNGRVEEALDYFH--TCRFDGLAINSMFY--SSLIDGLGKAGRVDEAERLFEEMSE 460
Query: 300 --VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQ-GVDPDAVTYLSLLSSCRHGGLVK 356
RD +N++I + +H EAI+LF+ M ++ G D TY LLS +
Sbjct: 461 KGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNE 520
Query: 357 EGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVI 408
E ++ M++ G+ P + + L +G + A ++ + P VI
Sbjct: 521 EALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDEL--APMGVI 570
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 131/281 (46%), Gaps = 8/281 (2%)
Query: 202 NVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAH 261
+V+S++ ++ G+ + +D +L +M+ +KPN + Y S++ L A
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 262 CQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRD----VVTWNSMIAGYAQH 317
++I+ G V LI + K G I A F M RD V+T+ ++I+G+ Q
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 318 GLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHY 377
G EA LF EM +G++PD+VT+ L++ G +K+ N M++ G P + Y
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 378 SCIVDLLGRAGLIREARDFIENM---PVCPNAVIWGSLLSSSRLHGNVWIGIE-AAESRL 433
+ ++D L + G + A + + M + PN + S+++ GN+ ++ E
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 434 LLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPN 474
+ T L + Y G ++ + K M KGL+P
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPT 560
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 126/270 (46%), Gaps = 11/270 (4%)
Query: 164 ITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERN----VVSWTAIIAGFAQEWRV 219
I G + + V ++LI + + A + F EM R+ V+++TAII+GF Q +
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402
Query: 220 DMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNAL 279
+LFH M ++P+ T+T L++ +G + H +IQ G + L
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462
Query: 280 IAMYSKCGVIDDALYIFENM----VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGV 335
I K G +D A + M + ++ T+NS++ G + G +EA+ L E G+
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522
Query: 336 DPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARD 395
+ D VTY +L+ + G + + Q M+ G+QP + ++ +++ G++ +
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 582
Query: 396 FIENM---PVCPNAVIWGSLLSSSRLHGNV 422
+ M + PNA + SL+ + N+
Sbjct: 583 LLNWMLAKGIAPNATTFNSLVKQYCIRNNL 612
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 107/227 (47%), Gaps = 10/227 (4%)
Query: 176 SSLISLYSRCALSGDAYRVFEEMPER----NVVSWTAIIAGFAQEWRVDMCLELFHLMRG 231
+ LI+ Y + DA+RV M + NVV++T +I G +E +D EL H M
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 232 SEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDD 291
++PN FTY S+++ SG + + G ++ L+ Y K G +D
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 292 ALYIFENMVGR----DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLS 347
A I + M+G+ +VT+N ++ G+ HG+ ++ L M+ +G+ P+A T+ SL+
Sbjct: 545 AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVK 604
Query: 348 S-CRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREA 393
C L K + M GV P Y +V +A ++EA
Sbjct: 605 QYCIRNNL-KAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEA 650
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 137/325 (42%), Gaps = 22/325 (6%)
Query: 167 GFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV----VSWTAIIAGFAQEWRVDMC 222
G N Y+ S+I L R +A F EM + + V +T +I GF + +
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370
Query: 223 LELFHLMRGSEMKPNYFTYTSLLSA-CMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIA 281
+ F+ M ++ P+ TYT+++S C + G+ H ++ G LI
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH-EMFCKGLEPDSVTFTELIN 429
Query: 282 MYSKCGVIDDALYIFENMV----GRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDP 337
Y K G + DA + +M+ +VVT+ ++I G + G A L EM K G+ P
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 338 DAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFI 397
+ TY S+++ G ++E G+ Y+ ++D ++G + +A++ +
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 398 ENM---PVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRL--LLEPGC---SATLQQLANL 449
+ M + P V + L++ LHG +E E L +L G + T L
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGM----LEDGEKLLNWMLAKGIAPNATTFNSLVKQ 605
Query: 450 YASVGWWNQVARVRKLMKDKGLKPN 474
Y + K M +G+ P+
Sbjct: 606 YCIRNNLKAATAIYKDMCSRGVGPD 630
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 131/281 (46%), Gaps = 8/281 (2%)
Query: 202 NVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAH 261
+V+S++ ++ G+ + +D +L +M+ +KPN + Y S++ L A
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 262 CQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRD----VVTWNSMIAGYAQH 317
++I+ G V LI + K G I A F M RD V+T+ ++I+G+ Q
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 318 GLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHY 377
G EA LF EM +G++PD+VT+ L++ G +K+ N M++ G P + Y
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 378 SCIVDLLGRAGLIREARDFIENM---PVCPNAVIWGSLLSSSRLHGNVWIGIE-AAESRL 433
+ ++D L + G + A + + M + PN + S+++ GN+ ++ E
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 434 LLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPN 474
+ T L + Y G ++ + K M KGL+P
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPT 560
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 126/270 (46%), Gaps = 11/270 (4%)
Query: 164 ITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERN----VVSWTAIIAGFAQEWRV 219
I G + + V ++LI + + A + F EM R+ V+++TAII+GF Q +
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 402
Query: 220 DMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNAL 279
+LFH M ++P+ T+T L++ +G + H +IQ G + L
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTL 462
Query: 280 IAMYSKCGVIDDALYIFENM----VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGV 335
I K G +D A + M + ++ T+NS++ G + G +EA+ L E G+
Sbjct: 463 IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522
Query: 336 DPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARD 395
+ D VTY +L+ + G + + Q M+ G+QP + ++ +++ G++ +
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 582
Query: 396 FIENM---PVCPNAVIWGSLLSSSRLHGNV 422
+ M + PNA + SL+ + N+
Sbjct: 583 LLNWMLAKGIAPNATTFNSLVKQYCIRNNL 612
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 107/227 (47%), Gaps = 10/227 (4%)
Query: 176 SSLISLYSRCALSGDAYRVFEEMPER----NVVSWTAIIAGFAQEWRVDMCLELFHLMRG 231
+ LI+ Y + DA+RV M + NVV++T +I G +E +D EL H M
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 232 SEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDD 291
++PN FTY S+++ SG + + G ++ L+ Y K G +D
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 292 ALYIFENMVGR----DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLS 347
A I + M+G+ +VT+N ++ G+ HG+ ++ L M+ +G+ P+A T+ SL+
Sbjct: 545 AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVK 604
Query: 348 S-CRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREA 393
C L K + M GV P Y +V +A ++EA
Sbjct: 605 QYCIRNNL-KAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEA 650
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 137/325 (42%), Gaps = 22/325 (6%)
Query: 167 GFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV----VSWTAIIAGFAQEWRVDMC 222
G N Y+ S+I L R +A F EM + + V +T +I GF + +
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370
Query: 223 LELFHLMRGSEMKPNYFTYTSLLSA-CMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIA 281
+ F+ M ++ P+ TYT+++S C + G+ H ++ G LI
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH-EMFCKGLEPDSVTFTELIN 429
Query: 282 MYSKCGVIDDALYIFENMV----GRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDP 337
Y K G + DA + +M+ +VVT+ ++I G + G A L EM K G+ P
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489
Query: 338 DAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFI 397
+ TY S+++ G ++E G+ Y+ ++D ++G + +A++ +
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549
Query: 398 ENM---PVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRL--LLEPGC---SATLQQLANL 449
+ M + P V + L++ LHG +E E L +L G + T L
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGM----LEDGEKLLNWMLAKGIAPNATTFNSLVKQ 605
Query: 450 YASVGWWNQVARVRKLMKDKGLKPN 474
Y + K M +G+ P+
Sbjct: 606 YCIRNNLKAATAIYKDMCSRGVGPD 630
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 160/377 (42%), Gaps = 62/377 (16%)
Query: 158 QYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP----ERNVVSWTAIIAGF 213
QY + G + + +SLI Y + A++VF EMP RN V++T +I G
Sbjct: 239 QYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGL 298
Query: 214 AQEWRVDMCLELFHLMRGSE-----------------------------------MKPNY 238
R+D ++LF M+ E +KPN
Sbjct: 299 CVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNI 358
Query: 239 FTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFEN 298
TYT L+ + R Q+++ G + NALI Y K G+I+DA+ + E
Sbjct: 359 HTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVEL 418
Query: 299 MVGR----DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLS-SCRHGG 353
M R + T+N +I GY + + +A+ + +M+++ V PD VTY SL+ CR G
Sbjct: 419 MESRKLSPNTRTYNELIKGYCKSNV-HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477
Query: 354 LVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDF---IENMPVCPNAVIWG 410
++ + M + G+ P Y+ ++D L ++ + EA D +E V PN V++
Sbjct: 478 FDSAYRL-LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYT 536
Query: 411 SLLSSSRLHGNVWIGIEAAESRLLLE----PGC---SATLQQLANLYASVGWWNQVARVR 463
+L+ G V E+ L+LE C S T L + + G + +
Sbjct: 537 ALIDGYCKAGKV------DEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLE 590
Query: 464 KLMKDKGLKPNPGSSWI 480
+ M GL+P + I
Sbjct: 591 EKMVKIGLQPTVSTDTI 607
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 147/335 (43%), Gaps = 27/335 (8%)
Query: 176 SSLISLYSRCALSGDAYRVFEEMPER----NVVSWTAIIAGFAQEWRVDMCLELFHLMRG 231
++L++ +R L + +V+ EM E N+ ++ ++ G+ + V+ + +
Sbjct: 187 NTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVE 246
Query: 232 SEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFH----SYLHVDNALIAMYSKCG 287
+ + P++FTYTSL+ L ++ G +Y H+ + L
Sbjct: 247 AGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARR--- 303
Query: 288 VIDDALYIFENMVGRD----VVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYL 343
ID+A+ +F M + V T+ +I EA++L +EM + G+ P+ TY
Sbjct: 304 -IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362
Query: 344 SLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENM--- 400
L+ S ++ + M+E G+ P + Y+ +++ + G+I +A D +E M
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR 422
Query: 401 PVCPNAVIWGSLLS---SSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWN 457
+ PN + L+ S +H + + + E ++L + T L + G ++
Sbjct: 423 KLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPD---VVTYNSLIDGQCRSGNFD 479
Query: 458 QVARVRKLMKDKGLKPN--PGSSWIEVKSKVHRFE 490
R+ LM D+GL P+ +S I+ K R E
Sbjct: 480 SAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVE 514
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 142/327 (43%), Gaps = 21/327 (6%)
Query: 164 ITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPER----NVVSWTAIIAGFAQEWRV 219
+ G + NV ++LI+ Y + + DA V E M R N ++ +I G+ + V
Sbjct: 385 LEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NV 443
Query: 220 DMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNAL 279
+ + + M ++ P+ TY SL+ SG + G ++
Sbjct: 444 HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSM 503
Query: 280 IAMYSKCGVIDDALYIFENM----VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGV 335
I K +++A +F+++ V +VV + ++I GY + G EA + E+M+ +
Sbjct: 504 IDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNC 563
Query: 336 DPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARD 395
P+++T+ +L+ G +KE + MV+ G+QP + + ++ L + G A
Sbjct: 564 LPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYS 623
Query: 396 FIENM---PVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRL--LLEPGCSATLQQLANL- 449
+ M P+A + + + + G + AE + + E G S L ++L
Sbjct: 624 RFQQMLSSGTKPDAHTYTTFIQTYCREGRLL----DAEDMMAKMRENGVSPDLFTYSSLI 679
Query: 450 --YASVGWWNQVARVRKLMKDKGLKPN 474
Y +G N V K M+D G +P+
Sbjct: 680 KGYGDLGQTNFAFDVLKRMRDTGCEPS 706
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 82/411 (19%), Positives = 159/411 (38%), Gaps = 82/411 (19%)
Query: 71 LANALRILNLVSPKKSASDIENRRSHLRLIEDMLENSVINHVGSNLATLKTTTEMSSVME 130
+ +A+ ++ L+ +K + N R++ LI+ +++V +G ++ ++E
Sbjct: 409 IEDAVDVVELMESRKLSP---NTRTYNELIKGYCKSNVHKAMGV----------LNKMLE 455
Query: 131 QELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITT--GFIANVYVGSSLISLYSRCALS 188
+++ DV + + G R N Y L++ G + + + +S+I +
Sbjct: 456 RKVLPDVVTYNSLID--GQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRV 513
Query: 189 GDAYRVFEEMPER----NVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSL 244
+A +F+ + ++ NVV +TA+I G+ + +VD + M PN T+ +L
Sbjct: 514 EEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNAL 573
Query: 245 LSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIF-------- 296
+ G L +++++G + D LI K G D A F
Sbjct: 574 IHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGT 633
Query: 297 -------------------------------ENMVGRDVVTWNSMIAGYAQHGLAQEAIS 325
EN V D+ T++S+I GY G A
Sbjct: 634 KPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFD 693
Query: 326 LFEEMIKQGVDPDAVTYLSLLSS----------------CRHGGLVKEGQV--YFNSMVE 367
+ + M G +P T+LSL+ C +++ V MVE
Sbjct: 694 VLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVE 753
Query: 368 HGVQPKLDHYSCIVDLLGRAGLIREARDFIENMP----VCPNAVIWGSLLS 414
H V P Y ++ + G +R A ++M + P+ +++ +LLS
Sbjct: 754 HSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLS 804
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 136/275 (49%), Gaps = 11/275 (4%)
Query: 164 ITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERN----VVSWTAIIAGFAQEWRV 219
+ GF NVYV + L++ + + DA +VF+E+ +R+ VVS+ +I G+ + +
Sbjct: 232 LDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNL 291
Query: 220 DMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNAL 279
D L H M S +P+ FTY++L++A + G ++ + G + L
Sbjct: 292 DEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTL 351
Query: 280 IAMYSKCGVIDDALYIFENMVGR----DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGV 335
I +S+ G ID ++ M+ + D+V +N+++ G+ ++G A ++ + MI++G+
Sbjct: 352 IHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGL 411
Query: 336 DPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARD 395
PD +TY +L+ GG V+ M ++G++ +S +V + + G + +A
Sbjct: 412 RPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAER 471
Query: 396 FIENM---PVCPNAVIWGSLLSSSRLHGNVWIGIE 427
+ M + P+ V + ++ + G+ G +
Sbjct: 472 ALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFK 506
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 121/262 (46%), Gaps = 11/262 (4%)
Query: 171 NVYVGSSLISLYSRCALSGDAYRVFEEMPER----NVVSWTAIIAGFAQEWRVDMCLELF 226
+V+ S+LI+ + A+ +F+EM +R N V +T +I G ++ +D+ E +
Sbjct: 309 DVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESY 368
Query: 227 HLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKC 286
M ++P+ Y +L++ +G L R +I+ G LI + +
Sbjct: 369 QKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRG 428
Query: 287 GVIDDALYIFENM----VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTY 342
G ++ AL I + M + D V +++++ G + G +A EM++ G+ PD VTY
Sbjct: 429 GDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTY 488
Query: 343 LSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREAR---DFIEN 399
++ + G + G M G P + Y+ +++ L + G ++ A D + N
Sbjct: 489 TMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLN 548
Query: 400 MPVCPNAVIWGSLLSSSRLHGN 421
+ V P+ + + +LL H N
Sbjct: 549 IGVVPDDITYNTLLEGHHRHAN 570
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 106/239 (44%), Gaps = 10/239 (4%)
Query: 243 SLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGR 302
+LL M G G + +I+ GF ++V N L+ + K G I DA +F+ + R
Sbjct: 210 NLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKR 269
Query: 303 D----VVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEG 358
VV++N++I GY + G E L +M K PD TY +L+++ +
Sbjct: 270 SLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGA 329
Query: 359 QVYFNSMVEHGVQPKLDHYSCIVDLLGRAG---LIREARDFIENMPVCPNAVIWGSLLSS 415
F+ M + G+ P ++ ++ R G L++E+ + + + P+ V++ +L++
Sbjct: 330 HGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNG 389
Query: 416 SRLHGNVWIGIEAAES--RLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLK 472
+G++ + R L P T L + + G +RK M G++
Sbjct: 390 FCKNGDLVAARNIVDGMIRRGLRPD-KITYTTLIDGFCRGGDVETALEIRKEMDQNGIE 447
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 131/294 (44%), Gaps = 12/294 (4%)
Query: 194 VFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGA 253
+ E+ + +V ++ A+I GF + R+D + MR + P+ TY ++ + G
Sbjct: 149 ILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK 208
Query: 254 LGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGR----DVVTWNS 309
L Q++ + LI G +D+AL + + M+ R D+ T+N+
Sbjct: 209 LDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNT 268
Query: 310 MIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHG 369
+I G + G+ A + + +G +PD ++Y LL + + G +EG+ M
Sbjct: 269 IIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 328
Query: 370 VQPKLDHYSCIVDLLGRAGLIREARDFIENMP---VCPNAVIWGSLLSSSRLHGNVWIGI 426
P + YS ++ L R G I EA + ++ M + P+A + L+++ G + + I
Sbjct: 329 CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAI 388
Query: 427 EAAESRLLLEPGCSATLQQLANLYASV---GWWNQVARVRKLMKDKGLKPNPGS 477
E E+ ++ GC + + A++ G +Q + + + G PN S
Sbjct: 389 EFLET--MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSS 440
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 107/239 (44%), Gaps = 10/239 (4%)
Query: 171 NVYVGSSLISLYSRCALSGDAYRVFEEMPERNVV----SWTAIIAGFAQEWRVDMCLELF 226
NV S LI+ R +A + + M E+ + S+ +IA F +E R+D+ +E
Sbjct: 332 NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 391
Query: 227 HLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFH----SYLHVDNALIAM 282
M P+ Y ++L+ +G ++ ++G SY + +AL +
Sbjct: 392 ETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSS 451
Query: 283 YSKCGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTY 342
K + L + N + D +T+NSMI+ + G+ EA L +M P VTY
Sbjct: 452 GDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTY 511
Query: 343 -LSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENM 400
+ LL C+ +++ SMV +G +P Y+ +++ +G AG EA + ++
Sbjct: 512 NIVLLGFCK-AHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 88/208 (42%), Gaps = 8/208 (3%)
Query: 167 GFIANVYVGSSLISLYSRCALSGDAYRVFEEMPER----NVVSWTAIIAGFAQEWRVDMC 222
G + Y LI+ + R A E M ++V++ ++A + + D
Sbjct: 363 GLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQA 422
Query: 223 LELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAM 282
LE+F + PN +Y ++ SA SG +++ G N++I+
Sbjct: 423 LEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISC 482
Query: 283 YSKCGVIDDALYIFENMVGRD----VVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPD 338
+ G++D+A + +M + VVT+N ++ G+ + ++AI++ E M+ G P+
Sbjct: 483 LCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPN 542
Query: 339 AVTYLSLLSSCRHGGLVKEGQVYFNSMV 366
TY L+ G E N +V
Sbjct: 543 ETTYTVLIEGIGFAGYRAEAMELANDLV 570
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 133/277 (48%), Gaps = 11/277 (3%)
Query: 149 SKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPER----NVV 204
S DL+G I +G NV + ++LI + + + GDA RV +EM E+ ++
Sbjct: 429 SSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIF 488
Query: 205 SWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQI 264
+ ++I G ++ R+D M + +KPN FTY + +S + + ++
Sbjct: 489 CYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM 548
Query: 265 IQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGR----DVVTWNSMIAGYAQHGLA 320
+ G + LI Y K G + +A + +MV + D T+ ++ G ++
Sbjct: 549 RECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKV 608
Query: 321 QEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCI 380
+A +F EM +G+ PD +Y L++ G +++ F+ MVE G+ P + Y+ +
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNML 668
Query: 381 VDLLGRAGLIREARDFIENMPVC---PNAVIWGSLLS 414
+ R+G I +A++ ++ M V PNAV + +++
Sbjct: 669 LGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIID 705
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 138/359 (38%), Gaps = 49/359 (13%)
Query: 164 ITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVV----SWTAIIAGFAQEWRV 219
I +G I +SLI Y R Y + EM +RN+V ++ ++ G +
Sbjct: 374 IASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDL 433
Query: 220 DMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNAL 279
D + M S +PN YT+L+ + + G ++ + G + N+L
Sbjct: 434 DGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSL 493
Query: 280 IAMYSKCGVIDDA----LYIFENMVGRDVVTWNSMIAG---------------------- 313
I SK +D+A + + EN + + T+ + I+G
Sbjct: 494 IIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV 553
Query: 314 -------------YAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQV 360
Y + G EA S + M+ QG+ DA TY L++ V + +
Sbjct: 554 LPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEE 613
Query: 361 YFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENM---PVCPNAVIWGSLLSSSR 417
F M G+ P + Y +++ + G +++A + M + PN +I+ LL
Sbjct: 614 IFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFC 673
Query: 418 LHGNVWIGIEAAESRLL--LEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPN 474
G + E + + L P + T + + Y G + R+ MK KGL P+
Sbjct: 674 RSGEIEKAKELLDEMSVKGLHPN-AVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPD 731
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 94/191 (49%), Gaps = 8/191 (4%)
Query: 167 GFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVV----SWTAIIAGFAQEWRVDMC 222
G + N + + LI+ Y + +A + M ++ ++ ++T ++ G + +VD
Sbjct: 552 GVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDA 611
Query: 223 LELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAM 282
E+F MRG + P+ F+Y L++ G + ++++ G + + N L+
Sbjct: 612 EEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGG 671
Query: 283 YSKCGVIDDALYIFENMVGR----DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPD 338
+ + G I+ A + + M + + VT+ ++I GY + G EA LF+EM +G+ PD
Sbjct: 672 FCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPD 731
Query: 339 AVTYLSLLSSC 349
+ Y +L+ C
Sbjct: 732 SFVYTTLVDGC 742
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 121/291 (41%), Gaps = 36/291 (12%)
Query: 206 WTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQII 265
+ I ++E ++ LF M S + P Y SL+ GY R + +
Sbjct: 350 YDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIE--------GYCREKN---V 398
Query: 266 QMGFHSYLHVD--NALIAMYS---------KCGVIDDALYIFENMVGR----DVVTWNSM 310
+ G+ + + N +I+ Y+ G +D A I + M+ +VV + ++
Sbjct: 399 RQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTL 458
Query: 311 IAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGV 370
I + Q+ +A+ + +EM +QG+ PD Y SL+ + E + + MVE+G+
Sbjct: 459 IKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL 518
Query: 371 QPKLDHYSCIVDLLGRAGLIREARDFIENMPVC---PNAVIWGSLLSSSRLHGNVWIGIE 427
+P Y + A A +++ M C PN V+ L++ G V IE
Sbjct: 519 KPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKV---IE 575
Query: 428 AAES-RLLLEPGC---SATLQQLANLYASVGWWNQVARVRKLMKDKGLKPN 474
A + R +++ G + T L N + + + M+ KG+ P+
Sbjct: 576 ACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPD 626
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 76/165 (46%), Gaps = 10/165 (6%)
Query: 195 FEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGAL 254
F+ + N V++ +I +E ++ ELFH M+ + + P TYTSLL+ G
Sbjct: 797 FDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRR 856
Query: 255 GYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVV--------- 305
+ I G + + +I + K G+ AL + + M ++ V
Sbjct: 857 AEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSIS 916
Query: 306 TWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLS-SC 349
T ++++G+A+ G + A + E M++ PD+ T + L++ SC
Sbjct: 917 TCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 85/197 (43%), Gaps = 14/197 (7%)
Query: 289 IDDALYIFENMVGRDVV----TWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLS 344
+D AL + E+M+ + +V T++ +I G + ++A SL EM GV D TY
Sbjct: 258 VDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317
Query: 345 LLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENM---P 401
L+ G + + MV HG+ K Y C + ++ + G++ +A+ + M
Sbjct: 318 LIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASG 377
Query: 402 VCPNAVIWGSLLSSSRLHGNVWIG----IEAAESRLLLEPGCSATLQQLANLYASVGWWN 457
+ P A + SL+ NV G +E + +++ P T + S G +
Sbjct: 378 LIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISP---YTYGTVVKGMCSSGDLD 434
Query: 458 QVARVRKLMKDKGLKPN 474
+ K M G +PN
Sbjct: 435 GAYNIVKEMIASGCRPN 451
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 118/255 (46%), Gaps = 12/255 (4%)
Query: 171 NVYVGSSLISLYSRCALSGDAYRVFEEMP----ERNVVSWTAIIAGFAQEWRVDMCLELF 226
N ++ + +ISL R L VF+EMP R+V S+TA+I + + R + LEL
Sbjct: 140 NEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELL 199
Query: 227 HLMRGSEMKPNYFTYTSLLSACMGSGALGYG-RGAHCQIIQMGFHSYLHVDNALIAMYSK 285
M+ ++ P+ TY ++++AC G G G ++ G + N L++ +
Sbjct: 200 DRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAI 259
Query: 286 CGVIDDALYIFENM----VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVT 341
G+ D+A +F M + D+ T++ ++ + + ++ L EM G PD +
Sbjct: 260 RGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITS 319
Query: 342 YLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMP 401
Y LL + G +KE F+ M G P + YS +++L G++G + R M
Sbjct: 320 YNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMK 379
Query: 402 VC---PNAVIWGSLL 413
P+A + L+
Sbjct: 380 SSNTDPDAATYNILI 394
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 107/225 (47%), Gaps = 11/225 (4%)
Query: 180 SLYSRCALSG---DAYRVFEEMPERNVV----SWTAIIAGFAQEWRVDMCLELFHLMRGS 232
+L S CA+ G +A VF M + +V +++ ++ F + R++ +L M
Sbjct: 252 TLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASG 311
Query: 233 EMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDA 292
P+ +Y LL A SG++ G Q+ G + + L+ ++ + G DD
Sbjct: 312 GSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDV 371
Query: 293 LYIFENM----VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSS 348
+F M D T+N +I + + G +E ++LF +M+++ ++PD TY ++ +
Sbjct: 372 RQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFA 431
Query: 349 CRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREA 393
C GGL ++ + M + + P Y+ +++ G+A L EA
Sbjct: 432 CGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEA 476
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 116/274 (42%), Gaps = 24/274 (8%)
Query: 136 DVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVF 195
D+ SH V + G R L + G + ++ + L+ Y++ +A VF
Sbjct: 281 DLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVF 340
Query: 196 EEMPER----NVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGS 251
+M N +++ ++ F Q R D +LF M+ S P+ TY L+
Sbjct: 341 HQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEV---- 396
Query: 252 GALGYGRGAHCQIIQMGFHSYLHVD--------NALIAMYSKCGVIDDALYIFENMVGRD 303
+G G + + + FH + + +I K G+ +DA I + M D
Sbjct: 397 ----FGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTAND 452
Query: 304 VV----TWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQ 359
+V + +I + Q L +EA+ F M + G +P T+ SLL S GGLVKE +
Sbjct: 453 IVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESE 512
Query: 360 VYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREA 393
+ +V+ G+ D ++ ++ + G EA
Sbjct: 513 AILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEA 546
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 119/267 (44%), Gaps = 14/267 (5%)
Query: 223 LELFHLM-RGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIA 281
L LF M R KPN YT ++S G L ++ G + ALI
Sbjct: 125 LRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALIN 184
Query: 282 MYSKCGVIDDALYIFENM----VGRDVVTWNSMIAGYAQHGLAQEAI-SLFEEMIKQGVD 336
Y + G + +L + + M + ++T+N++I A+ GL E + LF EM +G+
Sbjct: 185 AYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQ 244
Query: 337 PDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDF 396
PD VTY +LLS+C GL E ++ F +M + G+ P L YS +V+ G+ + + D
Sbjct: 245 PDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDL 304
Query: 397 IENMP---VCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSA---TLQQLANLY 450
+ M P+ + LL + G++ + + GC+ T L NL+
Sbjct: 305 LGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQ--MQAAGCTPNANTYSVLLNLF 362
Query: 451 ASVGWWNQVARVRKLMKDKGLKPNPGS 477
G ++ V ++ MK P+ +
Sbjct: 363 GQSGRYDDVRQLFLEMKSSNTDPDAAT 389
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/354 (21%), Positives = 142/354 (40%), Gaps = 54/354 (15%)
Query: 170 ANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV----VSWTAIIAGFAQEWRVDMCLEL 225
AN Y S L++L+ + D ++F EM N ++ +I F + + L
Sbjct: 352 ANTY--SVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTL 409
Query: 226 FHLMRGSEMKPNYFTYTSLLSACMGSGAL----------------------------GYG 257
FH M ++P+ TY ++ AC G G L +G
Sbjct: 410 FHDMVEENIEPDMETYEGIIFAC-GKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFG 468
Query: 258 RGAHCQIIQMGFHSYLHVDN--------ALIAMYSKCGVIDDALYIFENMVG----RDVV 305
+ A + + F++ V + +L+ +++ G++ ++ I +V R+
Sbjct: 469 QAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRD 528
Query: 306 TWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSM 365
T+N+ I Y Q G +EA+ + +M K DPD T ++LS LV E + F M
Sbjct: 529 TFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEM 588
Query: 366 VEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENM---PVCPNAVIWGSLLSSSRLHGNV 422
+ P + Y ++ + G+ + + +E M V + G ++ +
Sbjct: 589 KASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSN 648
Query: 423 WIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKD---KGLKP 473
W +E +L E GC ++ L ++ W Q R +++ + +GL P
Sbjct: 649 WQIVEYVLDKLNSE-GCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGLFP 701
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 137/300 (45%), Gaps = 20/300 (6%)
Query: 191 AYRVFEEMPERN----VVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLS 246
A +F +M ERN VV ++ +I ++ D L LF+ M +K + TY+SL+
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288
Query: 247 ACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGR---- 302
G G ++I + +ALI ++ K G + +A ++ M+ R
Sbjct: 289 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP 348
Query: 303 DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYF 362
D +T+NS+I G+ + EA +F+ M+ +G +PD VTY L++S V +G F
Sbjct: 349 DTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLF 408
Query: 363 NSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENM---PVCPNAVIWGSLLSSSRLH 419
+ G+ P Y+ +V ++G + A++ + M V P+ V +G LL +
Sbjct: 409 REISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDN 468
Query: 420 GNVWIGIEAAE----SRLLLEPGC-SATLQQLANLYASVGWWNQVARVRKLMKDKGLKPN 474
G + +E E SR+ L G + + + N W+ + DKG+KP+
Sbjct: 469 GELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCS----LSDKGVKPD 524
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 113/250 (45%), Gaps = 12/250 (4%)
Query: 164 ITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP----ERNVVSWTAIIAGFAQEWRV 219
IT G + +SLI + + +A ++F+ M E ++V+++ +I + + RV
Sbjct: 342 ITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRV 401
Query: 220 DMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNAL 279
D + LF + + PN TY +L+ SG L + +++ G + L
Sbjct: 402 DDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGIL 461
Query: 280 IAMYSKCGVIDDALYIFENM----VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGV 335
+ G ++ AL IFE M + + +N +I G +A SLF + +GV
Sbjct: 462 LDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGV 521
Query: 336 DPDAVTYLSLLSS-CRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDL-LGRAGLIREA 393
PD VTY ++ C+ G L E + F M E G P Y+ ++ LG +GLI
Sbjct: 522 KPDVVTYNVMIGGLCKKGSL-SEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSV 580
Query: 394 RDFIENMPVC 403
+ IE M VC
Sbjct: 581 -ELIEEMKVC 589
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 20/197 (10%)
Query: 216 EWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSG----ALGYGRGAHCQIIQMGFHS 271
+ +V+ ++LF M S P + L SA + LG+ +G G
Sbjct: 48 DIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELN----GIEH 103
Query: 272 YLHVDNALIAMYSKCGVIDDALYIFENMVGR--------DVVTWNSMIAGYAQHGLAQEA 323
++ +I Y + + L+ F +++GR D +T+++++ G+ G EA
Sbjct: 104 DMYTMTIMINCYCRKKKL---LFAF-SVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 159
Query: 324 ISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDL 383
++L + M++ PD VT +L++ G V E V + MVE+G QP Y +++
Sbjct: 160 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNR 219
Query: 384 LGRAGLIREARDFIENM 400
L ++G A D M
Sbjct: 220 LCKSGNSALALDLFRKM 236
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 100/235 (42%), Gaps = 11/235 (4%)
Query: 190 DAYRVFEEM----PERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLL 245
DA +FE M P + + + + A+ + D+ L M + ++ + +T T ++
Sbjct: 53 DAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMI 112
Query: 246 SACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGR--- 302
+ L + + ++G+ + L+ + G + +A+ + + MV
Sbjct: 113 NCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR 172
Query: 303 -DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVY 361
D+VT +++I G G EA+ L + M++ G PD VTY +L+ G
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232
Query: 362 FNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMP---VCPNAVIWGSLL 413
F M E ++ + YS ++D L + G +A M + + V + SL+
Sbjct: 233 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLI 287
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 146/321 (45%), Gaps = 14/321 (4%)
Query: 170 ANVYVGSSLISLYSRCALSGDAYRVFEEMPER----NVVSWTAIIAGFAQEWRVDMCLEL 225
A+V + +++I + DA +F+EM + NVV+++++I+ R +L
Sbjct: 258 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 317
Query: 226 FHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSK 285
M ++ PN T+ +L+ A + G + +I+ + N+L+ +
Sbjct: 318 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCM 377
Query: 286 CGVIDDALYIFENMVGRD----VVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVT 341
+D A +FE MV +D VVT+N++I G+ + ++ LF EM +G+ D VT
Sbjct: 378 HDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 437
Query: 342 YLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREAR---DFIE 398
Y +L+ H G Q F MV GV P + YS ++D L G + +A D+++
Sbjct: 438 YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ 497
Query: 399 NMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLL--LEPGCSATLQQLANLYASVGWW 456
+ + I+ +++ G V G + S L ++P ++ L +
Sbjct: 498 KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQ 557
Query: 457 NQVARVRKLMKDKGLKPNPGS 477
A ++K MK+ G PN G+
Sbjct: 558 EAYALLKK-MKEDGPLPNSGT 577
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 105/239 (43%), Gaps = 15/239 (6%)
Query: 171 NVYVGSSLISLYSRCALSGDAYRVFEEMPERN----VVSWTAIIAGFAQEWRVDMCLELF 226
+++ +SL++ + A ++FE M ++ VV++ +I GF + RV+ ELF
Sbjct: 364 DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELF 423
Query: 227 HLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKC 286
M + + TYT+L+ G + Q++ G + + L+
Sbjct: 424 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 483
Query: 287 GVIDDALYIFENM----VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTY 342
G ++ AL +F+ M + D+ + +MI G + G + LF + +GV P+ VTY
Sbjct: 484 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 543
Query: 343 LSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIV-------DLLGRAGLIREAR 394
+++S L++E M E G P Y+ ++ D A LIRE R
Sbjct: 544 NTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMR 602
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 112/241 (46%), Gaps = 21/241 (8%)
Query: 190 DAYRVFEEM----PERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLL 245
DA +F M P ++V + +++ A+ + D+ + L M+ E+ +TY L+
Sbjct: 68 DAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILI 127
Query: 246 SACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGR--- 302
+ + +++++G+ + ++L+ Y I DA+ + + MV
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 187
Query: 303 -DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQV- 360
D +T+ ++I G H A EA++L + M+++G P+ VTY +++ GL K G
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN-----GLCKRGDTD 242
Query: 361 ----YFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMP---VCPNAVIWGSLL 413
N M ++ + ++ I+D L + + +A + + M + PN V + SL+
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302
Query: 414 S 414
S
Sbjct: 303 S 303
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 120/283 (42%), Gaps = 18/283 (6%)
Query: 205 SWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSAC--MGSGALGYGRGAHC 262
+ I+ + ++D + LF M S P+ + LLSA M + G
Sbjct: 52 DYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKM 111
Query: 263 QIIQM--GFHSYLHVDNALIAMYSKCGVIDDALYIFENMVG----RDVVTWNSMIAGYAQ 316
Q +++ G ++Y N LI + + I AL + M+ +VT +S++ GY
Sbjct: 112 QRLEIVHGLYTY----NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCH 167
Query: 317 HGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDH 376
+A++L ++M++ G PD +T+ +L+ E + MV+ G QP L
Sbjct: 168 GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT 227
Query: 377 YSCIVDLLGRAGLIREARDFIENM---PVCPNAVIWGSLLSS--SRLHGNVWIGIEAAES 431
Y +V+ L + G A + + M + + VI+ +++ S H + + +
Sbjct: 228 YGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 287
Query: 432 RLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPN 474
+ P T L + S G W+ +++ M +K + PN
Sbjct: 288 TKGIRPNV-VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 329
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 130/298 (43%), Gaps = 16/298 (5%)
Query: 191 AYRVFEEMPER----NVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLS 246
A VF+EM E NV ++ +I GF +D+ L LF M PN TY +L+
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 248
Query: 247 ACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGR---- 302
+ G + G L N +I + G + + ++ M R
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308
Query: 303 DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYF 362
D VT+N++I GY + G +A+ + EM++ G+ P +TY SL+ S G + +
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368
Query: 363 NSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMP---VCPNAVIWGSLLSSSRLH 419
+ M G+ P Y+ +VD + G + EA + M P+ V + +L++ +
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT 428
Query: 420 GNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGW---WNQVARVRKLMKDKGLKPN 474
G + I E + E G S + + + + ++ RV++ M +KG+KP+
Sbjct: 429 GKMEDAIAVLED--MKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPD 484
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 129/268 (48%), Gaps = 13/268 (4%)
Query: 160 HCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPER----NVVSWTAIIAGFAQ 215
H + G +V +SLI + A ++M R N ++T ++ GF+Q
Sbjct: 333 HAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQ 392
Query: 216 EWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHV 275
+ ++ + M + P+ TY +L++ +G + + + G +
Sbjct: 393 KGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVS 452
Query: 276 DNALIAMYSKCGVIDDALYIFENMVGR----DVVTWNSMIAGYAQHGLAQEAISLFEEMI 331
+ +++ + + +D+AL + MV + D +T++S+I G+ + +EA L+EEM+
Sbjct: 453 YSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEML 512
Query: 332 KQGVDPDAVTYLSLLSS-CRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLI 390
+ G+ PD TY +L+++ C G L K Q++ N MVE GV P + YS +++ L +
Sbjct: 513 RVGLPPDEFTYTALINAYCMEGDLEKALQLH-NEMVEKGVLPDVVTYSVLINGLNKQSRT 571
Query: 391 REARDFIENM---PVCPNAVIWGSLLSS 415
REA+ + + P+ V + +L+ +
Sbjct: 572 REAKRLLLKLFYEESVPSDVTYHTLIEN 599
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 125/282 (44%), Gaps = 16/282 (5%)
Query: 194 VFEEMPER----NVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACM 249
V EM R + V++ +I G+ +E L + M + P+ TYTSL+ +
Sbjct: 297 VLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMC 356
Query: 250 GSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM----VGRDVV 305
+G + Q+ G L+ +S+ G +++A + M VV
Sbjct: 357 KAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVV 416
Query: 306 TWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSM 365
T+N++I G+ G ++AI++ E+M ++G+ PD V+Y ++LS V E M
Sbjct: 417 TYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREM 476
Query: 366 VEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENM---PVCPNAVIWGSLLSSSRLHGNV 422
VE G++P YS ++ +EA D E M + P+ + +L+++ + G++
Sbjct: 477 VEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDL 536
Query: 423 WIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRK 464
++ ++E G L + + N+ +R R+
Sbjct: 537 EKALQLHNE--MVEKG---VLPDVVTYSVLINGLNKQSRTRE 573
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 110/255 (43%), Gaps = 25/255 (9%)
Query: 167 GFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV----VSWTAIIAGFAQEWRVDMC 222
G +V S+++S + R +A RV EM E+ + ++++++I GF ++ R
Sbjct: 445 GLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEA 504
Query: 223 LELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGF------HSYL--- 273
+L+ M + P+ FTYT+L++A G L H ++++ G +S L
Sbjct: 505 CDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLING 564
Query: 274 --------HVDNALIAMYSKCGVIDDALY--IFENMVGRDVVTWNSMIAGYAQHGLAQEA 323
L+ ++ + V D Y + EN + + S+I G+ G+ EA
Sbjct: 565 LNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEA 624
Query: 324 ISLFEEMIKQGVDPDAVTY-LSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVD 382
+FE M+ + PD Y + + CR G + K +Y MV+ G +V
Sbjct: 625 DQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLY-KEMVKSGFLLHTVTVIALVK 683
Query: 383 LLGRAGLIREARDFI 397
L + G + E I
Sbjct: 684 ALHKEGKVNELNSVI 698
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 141/308 (45%), Gaps = 25/308 (8%)
Query: 125 MSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSR 184
M+ ++ ++L V + + SK +N ++ + G ++Y ++L+S R
Sbjct: 460 MAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFR 519
Query: 185 CALSGDAYRVFEEMPERNV----VSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFT 240
L DA ++F EM E NV V++ +I G+ +E + E M + P+ ++
Sbjct: 520 AGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYS 579
Query: 241 YTSLLSA-CM---GSGALGYGRGAH---CQIIQMGFHSYLHVDNALIAMYSKCGVIDDAL 293
Y L+ C+ S A + G H C++ ++ + LH + + G +++AL
Sbjct: 580 YRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLH-------GFCREGKLEEAL 632
Query: 294 YIFENMVGR----DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSC 349
+ + MV R D+V + +I G +H + L +EM +G+ PD V Y S++ +
Sbjct: 633 SVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAK 692
Query: 350 RHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENM-PV--CPNA 406
G KE ++ M+ G P Y+ +++ L +AG + EA M PV PN
Sbjct: 693 SKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQ 752
Query: 407 VIWGSLLS 414
V +G L
Sbjct: 753 VTYGCFLD 760
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 151/343 (44%), Gaps = 24/343 (6%)
Query: 167 GFIANVYVGSSLISLYSRCALSGDAYRVFEEMPE----RNVVSWTAIIAGFAQEWRVDMC 222
G N++V ++LI + +A +F+ M + N V+++ +I F + ++D
Sbjct: 362 GVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTA 421
Query: 223 LELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAM 282
L M + +K + + Y SL++ G + G ++I + +L+
Sbjct: 422 LSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGG 481
Query: 283 YSKCGVIDDALYIFENMVGRDVV----TWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPD 338
Y G I+ AL ++ M G+ + T+ ++++G + GL ++A+ LF EM + V P+
Sbjct: 482 YCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPN 541
Query: 339 AVTYLSLLSS-CRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFI 397
VTY ++ C G + K + + M E G+ P Y ++ L G EA+ F+
Sbjct: 542 RVTYNVMIEGYCEEGDMSKAFE-FLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFV 600
Query: 398 ENM--------PVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANL 449
+ + +C ++ G +L + + E + + L+ C L +
Sbjct: 601 DGLHKGNCELNEICYTGLLHG-FCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLK 659
Query: 450 YASVGWWNQVARVRKLMKDKGLKPNPG--SSWIEVKSKVHRFE 490
+ + + K M D+GLKP+ +S I+ KSK F+
Sbjct: 660 HKDRKLFFGLL---KEMHDRGLKPDDVIYTSMIDAKSKTGDFK 699
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 143/352 (40%), Gaps = 62/352 (17%)
Query: 178 LISLYSRCALSGDAYRVFEEMPER-----NVVSWTAIIAGFAQEWRVDMCLELFHLMRGS 232
LI Y R D VF+ M + V + +A++ G + + +ELF+ M
Sbjct: 162 LIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSV 221
Query: 233 EMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDA 292
++P+ + YT ++ + L + + G + N LI K + +A
Sbjct: 222 GIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEA 281
Query: 293 LYIFENMVGRD----VVTW-----------------------------------NSMIAG 313
+ I +++ G+D VVT+ +S++ G
Sbjct: 282 VGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEG 341
Query: 314 YAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPK 373
+ G +EA++L + ++ GV P+ Y +L+ S G E ++ F+ M + G++P
Sbjct: 342 LRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPN 401
Query: 374 LDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLS----SSRLHGNVWIG-IEA 428
YS ++D+ R G + A F+ M V G LS +S ++G+ G I A
Sbjct: 402 DVTYSILIDMFCRRGKLDTALSFLGEM------VDTGLKLSVYPYNSLINGHCKFGDISA 455
Query: 429 AESRLL------LEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPN 474
AE + LEP T L Y S G N+ R+ M KG+ P+
Sbjct: 456 AEGFMAEMINKKLEPTV-VTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPS 506
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 96/216 (44%), Gaps = 12/216 (5%)
Query: 167 GFIANVYVGSSLISLYSRCALSGDAYRVFEEMPER----NVVSWTAIIAGFAQEWRVDMC 222
G + + +S+I S+ +A+ +++ M N V++TA+I G + V+
Sbjct: 677 GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEA 736
Query: 223 LELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGA--HCQIIQMGFHSYLHVDNALI 280
L M+ PN TY L + G + + H I++ G + N LI
Sbjct: 737 EVLCSKMQPVSSVPNQVTYGCFLDI-LTKGEVDMQKAVELHNAILK-GLLANTATYNMLI 794
Query: 281 AMYSKCGVIDDALYIFENMVGR----DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVD 336
+ + G I++A + M+G D +T+ +MI + ++AI L+ M ++G+
Sbjct: 795 RGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIR 854
Query: 337 PDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQP 372
PD V Y +L+ C G + + N M+ G+ P
Sbjct: 855 PDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIP 890
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 130/276 (47%), Gaps = 11/276 (3%)
Query: 162 LAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPER----NVVSWTAIIAGFAQEW 217
+ + G + +V +SLI Y + L G A V +M + NV S+T ++ GF +
Sbjct: 379 MVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLG 438
Query: 218 RVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDN 277
++D + + M +KPN + L+SA + ++ + G ++ N
Sbjct: 439 KIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFN 498
Query: 278 ALIAMYSKCGVIDDALYIFENMVGRDVV----TWNSMIAGYAQHGLAQEAISLFEEMIKQ 333
+LI+ + I AL++ +M+ VV T+N++I + + G +EA L EM+ Q
Sbjct: 499 SLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQ 558
Query: 334 GVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREA 393
G D +TY SL+ G V + + F M+ G P + +++ L R+G++ EA
Sbjct: 559 GSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEA 618
Query: 394 RDFIENMPV---CPNAVIWGSLLSSSRLHGNVWIGI 426
+F + M + P+ V + SL++ G + G+
Sbjct: 619 VEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 654
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 122/262 (46%), Gaps = 15/262 (5%)
Query: 167 GFIANVYVGSSLISLYSRCALSGDAYRVFEEMPER----NVVSWTAIIAGFAQEWRVDMC 222
G N + LIS + + +A +F EMP + +V ++ ++I+G + +
Sbjct: 454 GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHA 513
Query: 223 LELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAM 282
L L M + N TY +L++A + G + R +++ G N+LI
Sbjct: 514 LWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKG 573
Query: 283 YSKCGVIDDALYIFENMVGRD-----VVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDP 337
+ G +D A +FE M+ RD ++ N +I G + G+ +EA+ +EM+ +G P
Sbjct: 574 LCRAGEVDKARSLFEKML-RDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTP 632
Query: 338 DAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREA---- 393
D VT+ SL++ G +++G F + G+ P ++ ++ L + G + +A
Sbjct: 633 DIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLL 692
Query: 394 RDFIENMPVCPNAVIWGSLLSS 415
+ IE+ V PN W LL S
Sbjct: 693 DEGIEDGFV-PNHRTWSILLQS 713
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 113/260 (43%), Gaps = 16/260 (6%)
Query: 167 GFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVV----SWTAIIAGFAQEWRVDMC 222
G + N + +LI S+C +A ++ EEM V ++ +I G + R++
Sbjct: 247 GCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEA 306
Query: 223 LELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAM 282
++ + M P+ TY L++ G + + +I + + + N LI
Sbjct: 307 AKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHG 362
Query: 283 YSKCGVIDDALYIFENMVGR-----DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDP 337
+ G +DDA + +MV DV T+NS+I GY + GL A+ + +M +G P
Sbjct: 363 FVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKP 422
Query: 338 DAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFI 397
+ +Y L+ G + E N M G++P ++C++ + I EA +
Sbjct: 423 NVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIF 482
Query: 398 ENMP---VCPNAVIWGSLLS 414
MP P+ + SL+S
Sbjct: 483 REMPRKGCKPDVYTFNSLIS 502
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 91/215 (42%), Gaps = 17/215 (7%)
Query: 280 IAMYSKCGV--IDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQ-----EAISLFEEMIK 332
+ M + C V ID AL + +M V NS+I H L++ EA+ L EEM
Sbjct: 222 VVMKAFCAVNEIDSALSLLRDMTKHGCVP-NSVIYQTLIHSLSKCNRVNEALQLLEEMFL 280
Query: 333 QGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIRE 392
G PDA T+ ++ + E N M+ G P Y +++ L + G +
Sbjct: 281 MGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDA 340
Query: 393 ARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYAS 452
A+D +P P VI+ +L+ HG + +A S ++ G + +L
Sbjct: 341 AKDLFYRIPK-PEIVIFNTLIHGFVTHGRLD-DAKAVLSDMVTSYGIVPDVCTYNSLI-- 396
Query: 453 VGWWNQ-----VARVRKLMKDKGLKPNPGSSWIEV 482
G+W + V M++KG KPN S I V
Sbjct: 397 YGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILV 431
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 144/321 (44%), Gaps = 14/321 (4%)
Query: 170 ANVYVGSSLISLYSRCALSGDAYRVFEEMPER----NVVSWTAIIAGFAQEWRVDMCLEL 225
A+V + +++I + DA +F+EM + NVV+++++I+ R +L
Sbjct: 183 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 242
Query: 226 FHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSK 285
M ++ PN T+ +L+ A + G H +I+ + N+LI +
Sbjct: 243 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCM 302
Query: 286 CGVIDDALYIFENMVGRDVV----TWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVT 341
+D A +FE MV +D T+N++I G+ + ++ LF EM +G+ D VT
Sbjct: 303 HDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 362
Query: 342 YLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREAR---DFIE 398
Y +L+ H G Q F MV GV P + YS ++D L G + +A D+++
Sbjct: 363 YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ 422
Query: 399 NMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLL--LEPGCSATLQQLANLYASVGWW 456
+ + I+ +++ G V G + S L ++P ++ L +
Sbjct: 423 KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQ 482
Query: 457 NQVARVRKLMKDKGLKPNPGS 477
A ++K MK+ G P+ G+
Sbjct: 483 EAYALLKK-MKEDGPLPDSGT 502
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 132/295 (44%), Gaps = 13/295 (4%)
Query: 132 ELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDA 191
++ DV + + S R ++ + T G NV SSLIS DA
Sbjct: 180 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 239
Query: 192 YRVFEEMPER----NVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSA 247
++ +M E+ N+V++ A+I F +E + +L M + P+ FTY SL++
Sbjct: 240 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLING 299
Query: 248 CMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGR----D 303
L + ++ L N LI + K ++D +F M R D
Sbjct: 300 FCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 359
Query: 304 VVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSS-CRHGGLVKEGQVYF 362
VT+ ++I G G A +F++M+ GV PD +TY LL C +G L K +V F
Sbjct: 360 TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV-F 418
Query: 363 NSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMP---VCPNAVIWGSLLS 414
+ M + ++ + Y+ +++ + +AG + + D ++ V PN V + +++S
Sbjct: 419 DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 473
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 103/239 (43%), Gaps = 15/239 (6%)
Query: 171 NVYVGSSLISLYSRCALSGDAYRVFEEMPERNVV----SWTAIIAGFAQEWRVDMCLELF 226
+++ +SLI+ + A ++FE M ++ ++ +I GF + RV+ ELF
Sbjct: 289 DIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELF 348
Query: 227 HLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKC 286
M + + TYT+L+ G + Q++ G + + L+
Sbjct: 349 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 408
Query: 287 GVIDDALYIFENM----VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTY 342
G ++ AL +F+ M + D+ + +MI G + G + LF + +GV P+ VTY
Sbjct: 409 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 468
Query: 343 LSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIV-------DLLGRAGLIREAR 394
+++S L++E M E G P Y+ ++ D A LIRE R
Sbjct: 469 NTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 527
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 103/222 (46%), Gaps = 10/222 (4%)
Query: 188 SGDAYRVFEEMPER----NVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTS 243
+ +A + + M +R N+V++ ++ G + +D+ L + M ++++ + + +
Sbjct: 131 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNT 190
Query: 244 LLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRD 303
++ + + ++ G + ++LI+ G DA + +M+ +
Sbjct: 191 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 250
Query: 304 V----VTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSS-CRHGGLVKEG 358
+ VT+N++I + + G EA L ++MIK+ +DPD TY SL++ C H L K
Sbjct: 251 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAK 310
Query: 359 QVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENM 400
Q+ F MV P LD Y+ ++ ++ + + + M
Sbjct: 311 QM-FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM 351
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 107/228 (46%), Gaps = 17/228 (7%)
Query: 199 PERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGR 258
P ++ + +++ A+ + D+ + L M+ + N +TY L++ +
Sbjct: 6 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 65
Query: 259 GAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGR----DVVTWNSMIAGY 314
+++++G+ + ++L+ Y I DA+ + + MV D +T+ ++I G
Sbjct: 66 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 125
Query: 315 AQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQV-----YFNSMVEHG 369
H A EA++L + M+++G P+ VTY +++ GL K G + N M
Sbjct: 126 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN-----GLCKRGDIDLAFNLLNKMEAAK 180
Query: 370 VQPKLDHYSCIVDLLGRAGLIREARDFIENMP---VCPNAVIWGSLLS 414
++ + ++ I+D L + + +A + + M + PN V + SL+S
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 228
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 108/250 (43%), Gaps = 14/250 (5%)
Query: 236 PNYFTYTSLLSAC--MGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDAL 293
P+ F + LLSA M L G Q ++G L+ N LI + + I AL
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQ--RLGISHNLYTYNILINCFCRRSQISLAL 65
Query: 294 YIFENMVG----RDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSC 349
+ M+ +VT +S++ GY +A++L ++M++ G PD +T+ +L+
Sbjct: 66 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 125
Query: 350 RHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENM---PVCPNA 406
E + MV+ G QP L Y +V+ L + G I A + + M + +
Sbjct: 126 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADV 185
Query: 407 VIWGSLLSS--SRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRK 464
VI+ +++ S H + + + + P T L + S G W+ +++
Sbjct: 186 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNV-VTYSSLISCLCSYGRWSDASQLLS 244
Query: 465 LMKDKGLKPN 474
M +K + PN
Sbjct: 245 DMIEKKINPN 254
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 145/329 (44%), Gaps = 14/329 (4%)
Query: 178 LISLYSRCALSGDAYRVFEEMPER----NVVSWTAIIAGFAQEWRVDMCLELFHLMRGSE 233
LI R + G A ++ +EM +R +VV++ ++ G +E R+D ++ + M S
Sbjct: 245 LIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG 304
Query: 234 MKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDAL 293
+PN T+ +L + +G +++ GF + N LI + G++ A+
Sbjct: 305 CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAI 364
Query: 294 YIFENM----VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSC 349
I E M + +++N ++ G+ + AI E M+ +G PD VTY ++L++
Sbjct: 365 DILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTAL 424
Query: 350 RHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENM---PVCPNA 406
G V++ N + G P L Y+ ++D L +AG +A ++ M + P+
Sbjct: 425 CKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDT 484
Query: 407 VIWGSLLSSSRLHGNVWIGIEAAE--SRLLLEPGCSATLQQLANLYASVGWWNQVARVRK 464
+ + SL+ G V I+ R+ + P + T + ++
Sbjct: 485 ITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPN-AVTFNSIMLGLCKSRQTDRAIDFLV 543
Query: 465 LMKDKGLKPNPGSSWIEVKSKVHRFEAQD 493
M ++G KPN S I ++ + A++
Sbjct: 544 FMINRGCKPNETSYTILIEGLAYEGMAKE 572
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 159/384 (41%), Gaps = 28/384 (7%)
Query: 47 FCLTNQFFRPFSSQKLPPRRANKELANALRILNLVSPKKSASDIENRRSHLRLIEDMLEN 106
FCL QF R + +R NK L + R +S K + R L +E+
Sbjct: 14 FCLIQQFHREY-------KRGNK-LDVSCRTSGSISSKIPLGSRKRNRLVLVSAASKVES 65
Query: 107 SVINHVGSNLATLKTTTEMSSVMEQELGVDVCFLSHAVSSCGSKR------DLNGGVQYH 160
S +N TL + S+ V+ F V S R +L G ++
Sbjct: 66 SGLNGRAQKFETLSSGYSNSNGNGHYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFL 125
Query: 161 CLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPER----NVVSWTAIIAGFAQE 216
+ G + ++ ++LI + R + A ++ E + +V+++ +I+G+ +
Sbjct: 126 ENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKA 185
Query: 217 WRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVD 276
++ L + M + P+ TY ++L + SG L +++Q + +
Sbjct: 186 GEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITY 242
Query: 277 NALIAMYSKCGVIDDALYIFENMVGR----DVVTWNSMIAGYAQHGLAQEAISLFEEMIK 332
LI + + A+ + + M R DVVT+N ++ G + G EAI +M
Sbjct: 243 TILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPS 302
Query: 333 QGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIRE 392
G P+ +T+ +L S G + + M+ G P + ++ +++ L R GL+
Sbjct: 303 SGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGR 362
Query: 393 ARDFIENMP---VCPNAVIWGSLL 413
A D +E MP PN++ + LL
Sbjct: 363 AIDILEKMPQHGCQPNSLSYNPLL 386
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/232 (19%), Positives = 96/232 (41%), Gaps = 43/232 (18%)
Query: 150 KRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERN----VVS 205
++ ++ ++Y ++ G ++ +++++ + DA + ++ + +++
Sbjct: 392 EKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT 451
Query: 206 WTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQII 265
+ +I G A+ + ++L MR ++KP+ TY+SL+ G L
Sbjct: 452 YNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLV------GGL----------- 494
Query: 266 QMGFHSYLHVDNALIAMYSKCGVIDDALYI---FENMVGR-DVVTWNSMIAGYAQHGLAQ 321
S+ G +D+A+ FE M R + VT+NS++ G +
Sbjct: 495 ------------------SREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTD 536
Query: 322 EAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPK 373
AI MI +G P+ +Y L+ + G+ KE N + G+ K
Sbjct: 537 RAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKK 588
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 163/374 (43%), Gaps = 52/374 (13%)
Query: 129 MEQ-ELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCAL 187
ME+ ++ DV + + + + +++N + G NV +SLI
Sbjct: 246 MEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 305
Query: 188 SGDAYRVFEEMPER----NVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTS 243
DA R+ +M ER NVV+++A+I F +E ++ +L+ M + P+ FTY+S
Sbjct: 306 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 365
Query: 244 LLSA-CMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGR 302
L++ CM H L D+A ++FE M+ +
Sbjct: 366 LINGFCM--------------------HDRL----------------DEAKHMFELMISK 389
Query: 303 D----VVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEG 358
D VVT+N++I G+ + +E + LF EM ++G+ + VTY +L+ G
Sbjct: 390 DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 449
Query: 359 QVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREAR---DFIENMPVCPNAVIWGSLLSS 415
Q F MV GV P + YS ++D L + G + +A ++++ + P+ + ++
Sbjct: 450 QKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEG 509
Query: 416 SRLHGNVWIGIEAAESRLL--LEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKP 473
G V G + S L ++P ++ + G + + + MK+ G P
Sbjct: 510 MCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISG-FCRKGLKEEADALFREMKEDGTLP 568
Query: 474 NPGSSWIEVKSKVH 487
N G+ +++++
Sbjct: 569 NSGTYNTLIRARLR 582
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 128/287 (44%), Gaps = 8/287 (2%)
Query: 125 MSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSR 184
+S ++E+++ +V S + + + L + + I +++ SSLI+ +
Sbjct: 313 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 372
Query: 185 CALSGDAYRVFEEMPER----NVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFT 240
+A +FE M + NVV++ +I GF + RV+ +ELF M + N T
Sbjct: 373 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 432
Query: 241 YTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM- 299
Y +L+ +G + +++ G + + L+ K G ++ AL +FE +
Sbjct: 433 YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 492
Query: 300 ---VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVK 356
+ D+ T+N MI G + G ++ LF + +GV P+ + Y +++S GL +
Sbjct: 493 KSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKE 552
Query: 357 EGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVC 403
E F M E G P Y+ ++ R G + + I+ M C
Sbjct: 553 EADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSC 599
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 112/240 (46%), Gaps = 21/240 (8%)
Query: 190 DAYRVFEEM----PERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLL 245
DA +F EM P ++V + +++ A+ + D+ + L M+ + + ++Y L+
Sbjct: 63 DAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILI 122
Query: 246 SACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMV----G 301
+ L +++++G+ + ++L+ Y I +A+ + + M
Sbjct: 123 NCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQ 182
Query: 302 RDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQV- 360
+ VT+N++I G H A EA++L + M+ +G PD TY ++++ GL K G +
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVN-----GLCKRGDID 237
Query: 361 ----YFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDF---IENMPVCPNAVIWGSLL 413
M + ++ + Y+ I+D L + +A + ++N + PN V + SL+
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 115/270 (42%), Gaps = 14/270 (5%)
Query: 216 EWRVDMCLELFHLMRGSEMKPNYFTYTSLLSAC--MGSGALGYGRGAHCQIIQMGFHSYL 273
+ ++D ++LF M S P+ + LLSA M L G Q +++ + Y
Sbjct: 58 DLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYS 117
Query: 274 HVDNALIAMYSKCGVIDDALYIFENMVG----RDVVTWNSMIAGYAQHGLAQEAISLFEE 329
+ N LI + + + AL + M+ D+VT +S++ GY EA++L ++
Sbjct: 118 Y--NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQ 175
Query: 330 MIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGL 389
M P+ VT+ +L+ E + MV G QP L Y +V+ L + G
Sbjct: 176 MFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD 235
Query: 390 IREARDFIENM---PVCPNAVIWGSLLSSSRLHGNV--WIGIEAAESRLLLEPGCSATLQ 444
I A ++ M + + VI+ +++ + + NV + + + P T
Sbjct: 236 IDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNV-VTYN 294
Query: 445 QLANLYASVGWWNQVARVRKLMKDKGLKPN 474
L + G W+ +R+ M ++ + PN
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKINPN 324
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/215 (19%), Positives = 99/215 (46%), Gaps = 10/215 (4%)
Query: 147 CGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPER----N 202
C +KR + G++ G + N ++LI + A ++F++M +
Sbjct: 406 CKAKR-VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD 464
Query: 203 VVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHC 262
+++++ ++ G + +++ L +F ++ S+M+P+ +TY ++ +G + G C
Sbjct: 465 IITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 524
Query: 263 QIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVV----TWNSMIAGYAQHG 318
+ G + + +I+ + + G+ ++A +F M + T+N++I + G
Sbjct: 525 SLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDG 584
Query: 319 LAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGG 353
+ L +EM G DA T +S++ + H G
Sbjct: 585 DKAASAELIKEMRSCGFVGDAST-ISMVINMLHDG 618
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 124/259 (47%), Gaps = 11/259 (4%)
Query: 167 GFIANVYVGSSLISLYSRCALSGDAYRVFEEMPER----NVVSWTAIIAGFAQEWRVDMC 222
G NV SSLIS DA R+ +M ER NVV++ A+I F +E ++
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEA 349
Query: 223 LELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAM 282
+L+ M + P+ FTY+SL++ L + +I + N LI
Sbjct: 350 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLING 409
Query: 283 YSKCGVIDDALYIFENMVGR----DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPD 338
+ K ID+ + +F M R + VT+ ++I G+ Q A +F++M+ GV P+
Sbjct: 410 FCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPN 469
Query: 339 AVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIE 398
+TY +LL G +++ V F + ++P + Y+ +++ + +AG + + D
Sbjct: 470 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 529
Query: 399 NMP---VCPNAVIWGSLLS 414
++ V P+ +I+ +++S
Sbjct: 530 SLSLKGVKPDVIIYNTMIS 548
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 113/232 (48%), Gaps = 8/232 (3%)
Query: 170 ANVYVGSSLISLYSRCALSGDAYRVFEEMPER----NVVSWTAIIAGFAQEWRVDMCLEL 225
ANV + S++I + DA +F EM + NV++++++I+ R L
Sbjct: 258 ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRL 317
Query: 226 FHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSK 285
M ++ PN T+ +L+ A + G L + ++I+ + ++LI +
Sbjct: 318 LSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 377
Query: 286 CGVIDDALYIFENMVGRD----VVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVT 341
+D+A ++FE M+ +D VVT+N++I G+ + E + LF EM ++G+ + VT
Sbjct: 378 HDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVT 437
Query: 342 YLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREA 393
Y +L+ Q+ F MV GV P + Y+ ++D L + G + +A
Sbjct: 438 YTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 489
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 116/256 (45%), Gaps = 8/256 (3%)
Query: 125 MSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSR 184
+S ++E+++ +V + + + + L + + I +++ SSLI+ +
Sbjct: 318 LSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 377
Query: 185 CALSGDAYRVFEEMPER----NVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFT 240
+A +FE M + NVV++ +I GF + R+D +ELF M + N T
Sbjct: 378 HDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVT 437
Query: 241 YTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM- 299
YT+L+ + + Q++ G H + N L+ K G ++ A+ +FE +
Sbjct: 438 YTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 497
Query: 300 ---VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVK 356
+ + T+N MI G + G ++ LF + +GV PD + Y +++S GL +
Sbjct: 498 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKE 557
Query: 357 EGQVYFNSMVEHGVQP 372
E F M E G P
Sbjct: 558 EADALFRKMREDGPLP 573
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 115/238 (48%), Gaps = 8/238 (3%)
Query: 171 NVYVGSSLISLYSRCALSGDAYRVFEEMPER----NVVSWTAIIAGFAQEWRVDMCLELF 226
NV ++LI + + +A ++++EM +R ++ +++++I GF R+D +F
Sbjct: 329 NVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 388
Query: 227 HLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKC 286
LM + PN TY +L++ + + G ++ Q G LI + +
Sbjct: 389 ELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQA 448
Query: 287 GVIDDALYIFENMVGR----DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTY 342
D+A +F+ MV +++T+N+++ G ++G ++A+ +FE + + ++P TY
Sbjct: 449 RDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 508
Query: 343 LSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENM 400
++ G V++G F S+ GV+P + Y+ ++ R GL EA M
Sbjct: 509 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKM 566
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 115/262 (43%), Gaps = 18/262 (6%)
Query: 98 RLIEDMLENSVINHVGSNLATLKTTTEMSSVMEQE----------LGVDVCFLSHAVSSC 147
RL+ DM+E + +V + A + + ++E E + D+ S ++
Sbjct: 316 RLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 375
Query: 148 GSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPER----NV 203
L+ L I+ NV ++LI+ + + + +F EM +R N
Sbjct: 376 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNT 435
Query: 204 VSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQ 263
V++T +I GF Q D +F M + PN TY +LL +G L
Sbjct: 436 VTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 495
Query: 264 IIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM----VGRDVVTWNSMIAGYAQHGL 319
+ + ++ N +I K G ++D +F ++ V DV+ +N+MI+G+ + GL
Sbjct: 496 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGL 555
Query: 320 AQEAISLFEEMIKQGVDPDAVT 341
+EA +LF +M + G PD+ T
Sbjct: 556 KEEADALFRKMREDGPLPDSGT 577
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 108/233 (46%), Gaps = 8/233 (3%)
Query: 193 RVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSG 252
R+ + + N+V++ ++ G + +D+ L + M ++++ N Y++++ +
Sbjct: 215 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYR 274
Query: 253 ALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGR----DVVTWN 308
++ G + ++LI+ DA + +M+ R +VVT+N
Sbjct: 275 HEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFN 334
Query: 309 SMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSS-CRHGGLVKEGQVYFNSMVE 367
++I + + G EA L++EMIK+ +DPD TY SL++ C H L E + F M+
Sbjct: 335 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL-DEAKHMFELMIS 393
Query: 368 HGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHG 420
P + Y+ +++ +A I E + M ++ ++ ++ +HG
Sbjct: 394 KDCFPNVVTYNTLINGFCKAKRIDEGVELFREMS--QRGLVGNTVTYTTLIHG 444
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 112/241 (46%), Gaps = 21/241 (8%)
Query: 190 DAYRVFEEM----PERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLL 245
DA +F M P ++ + +++ A+ + D+ + L M+ + N +TY L+
Sbjct: 68 DAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILI 127
Query: 246 SACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGR--- 302
+ + +++++G+ + ++L+ Y I DA+ + + MV
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 187
Query: 303 -DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQV- 360
D +T+ ++I G H A EA++L + M+++G P+ VTY +++ GL K G +
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN-----GLCKRGDID 242
Query: 361 ----YFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDF---IENMPVCPNAVIWGSLL 413
N M ++ + YS ++D L + +A + +EN V PN + + SL+
Sbjct: 243 LAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 302
Query: 414 S 414
S
Sbjct: 303 S 303
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 118/281 (41%), Gaps = 14/281 (4%)
Query: 205 SWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSAC--MGSGALGYGRGAHC 262
+ I+ ++D + LF M S P+ F + LLSA M L G
Sbjct: 52 DYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKM 111
Query: 263 QIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVG----RDVVTWNSMIAGYAQHG 318
Q ++G L+ N LI + + I AL + M+ +VT +S++ GY
Sbjct: 112 Q--RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK 169
Query: 319 LAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYS 378
+A++L ++M++ G PD +T+ +L+ E + MV+ G QP L Y
Sbjct: 170 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 229
Query: 379 CIVDLLGRAGLIREARDFIENM---PVCPNAVIWGSLLSS--SRLHGNVWIGIEAAESRL 433
+V+ L + G I A + + M + N VI+ +++ S H + + +
Sbjct: 230 VVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 289
Query: 434 LLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPN 474
+ P T L + + W+ +R+ M ++ + PN
Sbjct: 290 GVRPNV-ITYSSLISCLCNYERWSDASRLLSDMIERKINPN 329
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 124/297 (41%), Gaps = 45/297 (15%)
Query: 243 SLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVD--------------------NALIAM 282
L C A G G + +I++ G HS D N L++
Sbjct: 35 DLCGMCYWGRAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSA 94
Query: 283 YSKCGVIDDALYIFENM----VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPD 338
+K D + + E M + ++ T+N +I + + A++L +M+K G +P
Sbjct: 95 IAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPS 154
Query: 339 AVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIE 398
VT SLL+ HG + + + MVE G +P ++ ++ L EA ++
Sbjct: 155 IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 214
Query: 399 NM---PVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGW 455
M PN V +G +++ G++ + LL +A ++ +Y++V
Sbjct: 215 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN------LLNKMEAAKIEANVVIYSTV-- 266
Query: 456 WNQVARVR---------KLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRRMSDIL 503
+ + + R M++KG++PN ++ + S + +E ++R +SD++
Sbjct: 267 IDSLCKYRHEDDALNLFTEMENKGVRPNV-ITYSSLISCLCNYERWSDASRLLSDMI 322
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 140/297 (47%), Gaps = 16/297 (5%)
Query: 174 VGSSLISLYSRCALSGDAYRVFEEMPE----RNVVSWTAIIAGFAQEWRVDMCLELFHLM 229
V SL ++ +A F +M + V S A ++ + RVD+ L + M
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 230 RGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVI 289
R ++ PN +T ++S SG L G + ++GF + N LIA + + G++
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLL 289
Query: 290 DDALYIFENMVGR-----DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLS 344
AL + +NM+G+ +VVT+N++I G+ + QEA +F EM V P+ VTY +
Sbjct: 290 SSALKL-KNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNT 348
Query: 345 LLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMP--- 401
L++ G + ++ MV +G+Q + Y+ ++ L + R+A F++ +
Sbjct: 349 LINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKEN 408
Query: 402 VCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQ 458
+ PN+ + +L+ + N G E +S ++ GC +Q N+ S N+
Sbjct: 409 LVPNSSTFSALIMGQCVRKNADRGFELYKS--MIRSGCHPN-EQTFNMLVSAFCRNE 462
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 140/297 (47%), Gaps = 16/297 (5%)
Query: 174 VGSSLISLYSRCALSGDAYRVFEEMPE----RNVVSWTAIIAGFAQEWRVDMCLELFHLM 229
V SL ++ +A F +M + V S A ++ + RVD+ L + M
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 230 RGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVI 289
R ++ PN +T ++S SG L G + ++GF + N LIA + + G++
Sbjct: 230 RRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLL 289
Query: 290 DDALYIFENMVGR-----DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLS 344
AL + +NM+G+ +VVT+N++I G+ + QEA +F EM V P+ VTY +
Sbjct: 290 SSALKL-KNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNT 348
Query: 345 LLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMP--- 401
L++ G + ++ MV +G+Q + Y+ ++ L + R+A F++ +
Sbjct: 349 LINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKEN 408
Query: 402 VCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQ 458
+ PN+ + +L+ + N G E +S ++ GC +Q N+ S N+
Sbjct: 409 LVPNSSTFSALIMGQCVRKNADRGFELYKS--MIRSGCHPN-EQTFNMLVSAFCRNE 462
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 145/336 (43%), Gaps = 16/336 (4%)
Query: 153 LNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPE----RNVVSWTA 208
LN ++ L ++ G ++LI Y + + +A R+ +EM N S+T+
Sbjct: 381 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 440
Query: 209 IIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMG 268
+I D L M M P T+L+S G Q + G
Sbjct: 441 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 500
Query: 269 FHSYLHVDNALIAMYSKCGVIDDALYIFENMVGR----DVVTWNSMIAGYAQHGLAQEAI 324
F NAL+ + G +D+A I + ++GR D V++N++I+G EA
Sbjct: 501 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 560
Query: 325 SLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLL 384
+EM+K+G+ PD TY L+ + V+E +++ +G+ P + YS ++D
Sbjct: 561 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 620
Query: 385 GRAGLIREARDFIENM---PVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSA 441
+A E ++F + M V PN V++ L+ + G + + +E E + G S
Sbjct: 621 CKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRED--MKHKGISP 678
Query: 442 TLQQLANLYASVGWWNQVARVRKL---MKDKGLKPN 474
+L + ++V + L M+ +GL+PN
Sbjct: 679 NSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPN 714
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 124/284 (43%), Gaps = 16/284 (5%)
Query: 164 ITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPER----NVVSWTAIIAGFAQEWRV 219
+ GF+ + ++L+ +A+R+ +E+ R + VS+ +I+G + ++
Sbjct: 497 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 556
Query: 220 DMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNAL 279
D M +KP+ +TY+ L+ + + G ++ + +
Sbjct: 557 DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVM 616
Query: 280 IAMYSKCGVIDDALYIFENMVGRDV----VTWNSMIAGYAQHGLAQEAISLFEEMIKQGV 335
I K ++ F+ M+ ++V V +N +I Y + G A+ L E+M +G+
Sbjct: 617 IDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI 676
Query: 336 DPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARD 395
P++ TY SL+ V+E ++ F M G++P + HY+ ++D G+ G + +
Sbjct: 677 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVEC 736
Query: 396 FIENM---PVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLE 436
+ M V PN + + ++ GNV SRLL E
Sbjct: 737 LLREMHSKNVHPNKITYTVMIGGYARDGNV-----TEASRLLNE 775
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 8/184 (4%)
Query: 300 VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQ 359
V DV + + I + + G +EA+ LF +M + GV P+ VT+ +++ G E
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF 315
Query: 360 VYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMP---VCPNAVIWGSLLSSS 416
++ MVE G++P L YS +V L RA I +A ++ M PN +++ +L+ S
Sbjct: 316 MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF 375
Query: 417 RLHGNVWIGIEAAESRLLLEPG---CSATLQQLANLYASVGWWNQVARVRKLMKDKGLKP 473
G++ IE + L++ G S+T L Y G + R+ K M G
Sbjct: 376 IEAGSLNKAIEIKD--LMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 433
Query: 474 NPGS 477
N GS
Sbjct: 434 NQGS 437
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 110/252 (43%), Gaps = 11/252 (4%)
Query: 190 DAYRVFEEMPERNV----VSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLL 245
+A+ +EM +R + +++ +I G +V+ ++ + + + M P+ +TY+ ++
Sbjct: 558 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 617
Query: 246 SACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM----VG 301
C + G+ +++ V N LI Y + G + AL + E+M +
Sbjct: 618 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 677
Query: 302 RDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVY 361
+ T+ S+I G + +EA LFEEM +G++P+ Y +L+ G + + +
Sbjct: 678 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECL 737
Query: 362 FNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMP---VCPNAVIWGSLLSSSRL 418
M V P Y+ ++ R G + EA + M + P+++ + +
Sbjct: 738 LREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 797
Query: 419 HGNVWIGIEAAE 430
G V + ++
Sbjct: 798 QGGVLEAFKGSD 809
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 91/192 (47%), Gaps = 8/192 (4%)
Query: 163 AITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPER----NVVSWTAIIAGFAQEWR 218
+ G +VY+ ++ I+ + + +A ++F +M E NVV++ +I G R
Sbjct: 251 VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR 310
Query: 219 VDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNA 278
D M M+P TY+ L+ + +G ++ + GF + V N
Sbjct: 311 YDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNN 370
Query: 279 LIAMYSKCGVIDDALYIFENMVGRDV----VTWNSMIAGYAQHGLAQEAISLFEEMIKQG 334
LI + + G ++ A+ I + MV + + T+N++I GY ++G A A L +EM+ G
Sbjct: 371 LIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG 430
Query: 335 VDPDAVTYLSLL 346
+ + ++ S++
Sbjct: 431 FNVNQGSFTSVI 442
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 145/336 (43%), Gaps = 16/336 (4%)
Query: 153 LNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPE----RNVVSWTA 208
LN ++ L ++ G ++LI Y + + +A R+ +EM N S+T+
Sbjct: 381 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 440
Query: 209 IIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMG 268
+I D L M M P T+L+S G Q + G
Sbjct: 441 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 500
Query: 269 FHSYLHVDNALIAMYSKCGVIDDALYIFENMVGR----DVVTWNSMIAGYAQHGLAQEAI 324
F NAL+ + G +D+A I + ++GR D V++N++I+G EA
Sbjct: 501 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 560
Query: 325 SLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLL 384
+EM+K+G+ PD TY L+ + V+E +++ +G+ P + YS ++D
Sbjct: 561 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 620
Query: 385 GRAGLIREARDFIENM---PVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSA 441
+A E ++F + M V PN V++ L+ + G + + +E E + G S
Sbjct: 621 CKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRED--MKHKGISP 678
Query: 442 TLQQLANLYASVGWWNQVARVRKL---MKDKGLKPN 474
+L + ++V + L M+ +GL+PN
Sbjct: 679 NSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPN 714
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 124/284 (43%), Gaps = 16/284 (5%)
Query: 164 ITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPER----NVVSWTAIIAGFAQEWRV 219
+ GF+ + ++L+ +A+R+ +E+ R + VS+ +I+G + ++
Sbjct: 497 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 556
Query: 220 DMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNAL 279
D M +KP+ +TY+ L+ + + G ++ + +
Sbjct: 557 DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVM 616
Query: 280 IAMYSKCGVIDDALYIFENMVGRDV----VTWNSMIAGYAQHGLAQEAISLFEEMIKQGV 335
I K ++ F+ M+ ++V V +N +I Y + G A+ L E+M +G+
Sbjct: 617 IDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI 676
Query: 336 DPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARD 395
P++ TY SL+ V+E ++ F M G++P + HY+ ++D G+ G + +
Sbjct: 677 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVEC 736
Query: 396 FIENM---PVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLE 436
+ M V PN + + ++ GNV SRLL E
Sbjct: 737 LLREMHSKNVHPNKITYTVMIGGYARDGNV-----TEASRLLNE 775
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 8/184 (4%)
Query: 300 VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQ 359
V DV + + I + + G +EA+ LF +M + GV P+ VT+ +++ G E
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF 315
Query: 360 VYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMP---VCPNAVIWGSLLSSS 416
++ MVE G++P L YS +V L RA I +A ++ M PN +++ +L+ S
Sbjct: 316 MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF 375
Query: 417 RLHGNVWIGIEAAESRLLLEPG---CSATLQQLANLYASVGWWNQVARVRKLMKDKGLKP 473
G++ IE + L++ G S+T L Y G + R+ K M G
Sbjct: 376 IEAGSLNKAIEIKD--LMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNV 433
Query: 474 NPGS 477
N GS
Sbjct: 434 NQGS 437
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 110/252 (43%), Gaps = 11/252 (4%)
Query: 190 DAYRVFEEMPERNV----VSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLL 245
+A+ +EM +R + +++ +I G +V+ ++ + + + M P+ +TY+ ++
Sbjct: 558 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 617
Query: 246 SACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM----VG 301
C + G+ +++ V N LI Y + G + AL + E+M +
Sbjct: 618 DGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGIS 677
Query: 302 RDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVY 361
+ T+ S+I G + +EA LFEEM +G++P+ Y +L+ G + + +
Sbjct: 678 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECL 737
Query: 362 FNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMP---VCPNAVIWGSLLSSSRL 418
M V P Y+ ++ R G + EA + M + P+++ + +
Sbjct: 738 LREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 797
Query: 419 HGNVWIGIEAAE 430
G V + ++
Sbjct: 798 QGGVLEAFKGSD 809
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 91/192 (47%), Gaps = 8/192 (4%)
Query: 163 AITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPER----NVVSWTAIIAGFAQEWR 218
+ G +VY+ ++ I+ + + +A ++F +M E NVV++ +I G R
Sbjct: 251 VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGR 310
Query: 219 VDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNA 278
D M M+P TY+ L+ + +G ++ + GF + V N
Sbjct: 311 YDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNN 370
Query: 279 LIAMYSKCGVIDDALYIFENMVGRDV----VTWNSMIAGYAQHGLAQEAISLFEEMIKQG 334
LI + + G ++ A+ I + MV + + T+N++I GY ++G A A L +EM+ G
Sbjct: 371 LIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG 430
Query: 335 VDPDAVTYLSLL 346
+ + ++ S++
Sbjct: 431 FNVNQGSFTSVI 442
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 113/223 (50%), Gaps = 9/223 (4%)
Query: 175 GSSLISLYSRCALSGDAYRVFEEMP----ERNVVSWTAIIAGFAQEWRVDMCLELFHLMR 230
+ +ISLY + + +A +VFEEMP +R+V+S+ A+++ + + D+ ELF+ +
Sbjct: 112 AARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELP 171
Query: 231 GS-EMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVI 289
G +KP+ +Y +L+ A +L +I G + N L+ G
Sbjct: 172 GKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQF 231
Query: 290 DDALYIFENMVGR----DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSL 345
+ I+ MV + D+ T+N+ + G A ++E ++LF E+ G+ PD ++ ++
Sbjct: 232 ELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAM 291
Query: 346 LSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAG 388
+ + G + E + ++ +V+HG +P ++ ++ + +AG
Sbjct: 292 IRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAG 334
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 104/212 (49%), Gaps = 13/212 (6%)
Query: 278 ALIAMYSKCGVIDDALYIF---ENMVGR--DVVTWNSMIAGYAQHGLAQEAISLFEEMIK 332
A+I +Y++ G+ +A +F NM G+ DV+ +N MI Y + L ++A+SLF+ M
Sbjct: 484 AVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKN 543
Query: 333 QGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIRE 392
QG PD TY SL LV E Q M++ G +P Y+ ++ R GL+ +
Sbjct: 544 QGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSD 603
Query: 393 ARDFIENMP---VCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSA---TLQQL 446
A D E M V PN V++GSL++ G V I+ R++ E G + L L
Sbjct: 604 AVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYF--RMMEEHGVQSNHIVLTSL 661
Query: 447 ANLYASVGWWNQVARVRKLMKDKGLKPNPGSS 478
Y+ VG + RV MKD P+ +S
Sbjct: 662 IKAYSKVGCLEEARRVYDKMKDSEGGPDVAAS 693
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 100/206 (48%), Gaps = 15/206 (7%)
Query: 277 NALIAMYSKCGVIDDALYIFENMVGRDVV----TWNSMIAGYAQHGLAQEAISLFEEMIK 332
N+L M + ++D+A I M+ T+ +MIA Y + GL +A+ L+E M K
Sbjct: 554 NSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEK 613
Query: 333 QGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIRE 392
GV P+ V Y SL++ G+V+E YF M EHGVQ + ++ + G + E
Sbjct: 614 TGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEE 673
Query: 393 AR---DFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAES--RLLLEPG-CSA-TLQQ 445
AR D +++ P+ S+LS L ++ I + AES L E G C +
Sbjct: 674 ARRVYDKMKDSEGGPDVAASNSMLS---LCADLGI-VSEAESIFNALREKGTCDVISFAT 729
Query: 446 LANLYASVGWWNQVARVRKLMKDKGL 471
+ LY +G ++ V + M++ GL
Sbjct: 730 MMYLYKGMGMLDEAIEVAEEMRESGL 755
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 141/312 (45%), Gaps = 16/312 (5%)
Query: 176 SSLISLYSRCALSGDAYRVFEEMPERNV----VSWTAIIAGFAQEWRVDMCLELFHLMRG 231
+++I+ Y R L DA ++E M + V V + ++I GFA+ V+ ++ F +M
Sbjct: 589 AAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEE 648
Query: 232 SEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDD 291
++ N+ TSL+ A G L R + ++ + N+++++ + G++ +
Sbjct: 649 HGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSE 708
Query: 292 ALYIFENMVGR---DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSS 348
A IF + + DV+++ +M+ Y G+ EAI + EEM + G+ D ++ +++
Sbjct: 709 AESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMAC 768
Query: 349 CRHGGLVKEGQVYFNSM-VEHGVQPKLDHYSCIVDLLGRAGLIREA-----RDFIENMPV 402
G + E F+ M VE + + + LL + G+ EA + E P+
Sbjct: 769 YAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPL 828
Query: 403 CPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARV 462
A I +L S+ L+ + S + P + Y++ G + +
Sbjct: 829 ATPA-ITATLFSAMGLYAYALESCQELTSGEI--PREHFAYNAVIYTYSASGDIDMALKA 885
Query: 463 RKLMKDKGLKPN 474
M++KGL+P+
Sbjct: 886 YMRMQEKGLEPD 897
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 89/193 (46%), Gaps = 7/193 (3%)
Query: 277 NALIAMYSKCGVIDDALYIFENM----VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIK 332
N LI +Y K G ++DA +F M V D VT+N+MI HG EA SL ++M +
Sbjct: 309 NTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEE 368
Query: 333 QGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIRE 392
+G+ PD TY LLS G ++ Y+ + + G+ P + ++ +L + ++ E
Sbjct: 369 KGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAE 428
Query: 393 ARDFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGC---SATLQQLANL 449
I M + S+ +++ N + ++A + C S TL + ++
Sbjct: 429 VEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDV 488
Query: 450 YASVGWWNQVARV 462
YA G W + V
Sbjct: 489 YAEKGLWVEAETV 501
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 3/115 (2%)
Query: 302 RDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVY 361
R T+N++I Y + G +A +LF EM+K GV D VT+ +++ +C G + E +
Sbjct: 303 RLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESL 362
Query: 362 FNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDF---IENMPVCPNAVIWGSLL 413
M E G+ P Y+ ++ L AG I A ++ I + + P+ V ++L
Sbjct: 363 LKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVL 417
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 111/231 (48%), Gaps = 17/231 (7%)
Query: 202 NVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSA-CMGSGALGYGRGA 260
+V ++ +I G+ +++ D C ++ M + PN +Y +L++ C GS L
Sbjct: 458 SVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLL------ 511
Query: 261 HCQIIQM-----GFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGR----DVVTWNSMI 311
QI++ G + + N LI G I+DA + M+ + ++VT+N++I
Sbjct: 512 EAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLI 571
Query: 312 AGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQ 371
G + G EA L E+ ++G+ PD TY SL+S G V+ + M G++
Sbjct: 572 DGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIK 631
Query: 372 PKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVIWGSLLSSSRLHGNV 422
P L Y ++ L + G+ R F E M + P+ +++ +L +HG++
Sbjct: 632 PTLKTYHLLISLCTKEGIELTERLFGE-MSLKPDLLVYNGVLHCYAVHGDM 681
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 133/325 (40%), Gaps = 22/325 (6%)
Query: 167 GFIANVYVGSSLISLYSRCALSGDAYRVFEEMPER----NVVSWTAIIAGFAQEWRVDMC 222
GF+ + + S L YS + A V+E + N + + ++ +E +++
Sbjct: 314 GFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKA 373
Query: 223 LELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAM 282
E+ + PN Y +++ G L R + + G N LI
Sbjct: 374 EEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRR 433
Query: 283 YSKCGVIDDALYIFENM----VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPD 338
+ + G +++A M V V T+N +I GY + + + +EM G P+
Sbjct: 434 FCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPN 493
Query: 339 AVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIE 398
V+Y +L++ G + E Q+ M + GV PK+ Y+ ++D G I +A F +
Sbjct: 494 VVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSK 553
Query: 399 NM---PVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLE---PGCSATLQQLANLYAS 452
M + N V + +L+ + G + EA + LLLE G + +L +
Sbjct: 554 EMLKKGIELNLVTYNTLIDGLSMTGKLS---EAED--LLLEISRKGLKPDVFTYNSLISG 608
Query: 453 VGWWNQVARVRKL---MKDKGLKPN 474
G+ V R L MK G+KP
Sbjct: 609 YGFAGNVQRCIALYEEMKRSGIKPT 633
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 98/196 (50%), Gaps = 4/196 (2%)
Query: 190 DAYRVFEEMPER----NVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLL 245
DA+R +EM ++ N+V++ +I G + ++ +L + +KP+ FTY SL+
Sbjct: 547 DAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLI 606
Query: 246 SACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVV 305
S +G + + ++ + G L + LI++ +K G+ E + D++
Sbjct: 607 SGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLL 666
Query: 306 TWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSM 365
+N ++ YA HG ++A +L ++MI++ + D TY SL+ G + E + + M
Sbjct: 667 VYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEM 726
Query: 366 VEHGVQPKLDHYSCIV 381
++P+ D Y+ IV
Sbjct: 727 NAREMEPEADTYNIIV 742
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 118/290 (40%), Gaps = 46/290 (15%)
Query: 171 NVYVGSSLISLYSRCALSGDAYRVFEEMPER----NVVSWTAIIAGFAQEWRVDMCLELF 226
+V++ + LI + DA ++F+EM R +++++ +I G+ + + ++
Sbjct: 213 SVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVR 272
Query: 227 HLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKC 286
M+ ++P+ T+ +LL +G + ++ +GF + L YS
Sbjct: 273 ERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSN 332
Query: 287 GVIDDALYIFENMV-------------------------------GRDV--------VTW 307
+ AL ++E V GR++ V +
Sbjct: 333 EKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIY 392
Query: 308 NSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVE 367
N+MI GY + G A E M KQG+ PD + Y L+ G ++ + N M
Sbjct: 393 NTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKL 452
Query: 368 HGVQPKLDHYSCIVDLLGRAGLIREARDFIENMP---VCPNAVIWGSLLS 414
GV P ++ Y+ ++ GR + D ++ M PN V +G+L++
Sbjct: 453 KGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLIN 502
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 116/264 (43%), Gaps = 16/264 (6%)
Query: 223 LELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAM 282
LELF+ M+ + P+ F Y L+ + +++ L N LI
Sbjct: 199 LELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDG 258
Query: 283 YSKCGVIDDALYIFENM----VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPD 338
Y K G + + + E M + ++T+N+++ G + G+ ++A ++ +EM G PD
Sbjct: 259 YCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPD 318
Query: 339 AVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSC--IVDLLGRAGLIREARDF 396
A T+ L + + + V+ GV K++ Y+C +++ L + G I +A +
Sbjct: 319 AFTFSILFDGYSSNEKAEAALGVYETAVDSGV--KMNAYTCSILLNALCKEGKIEKAEEI 376
Query: 397 IEN---MPVCPNAVIWGSLLSSSRLHGNV---WIGIEAAESRLLLEPGCSATLQQLANLY 450
+ + PN VI+ +++ G++ + IEA E + ++P A L +
Sbjct: 377 LGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQ-GMKPDHLA-YNCLIRRF 434
Query: 451 ASVGWWNQVARVRKLMKDKGLKPN 474
+G + MK KG+ P+
Sbjct: 435 CELGEMENAEKEVNKMKLKGVSPS 458
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 84/182 (46%), Gaps = 4/182 (2%)
Query: 205 SWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQI 264
S T ++ + + + + +F + S+ +P+ F Y + A + +G G ++
Sbjct: 146 SLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRM 205
Query: 265 IQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGR----DVVTWNSMIAGYAQHGLA 320
+ + + N LI K ++DA +F+ M+ R ++T+N++I GY + G
Sbjct: 206 KHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNP 265
Query: 321 QEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCI 380
+++ + E M ++P +T+ +LL G+V++ + M + G P +S +
Sbjct: 266 EKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSIL 325
Query: 381 VD 382
D
Sbjct: 326 FD 327
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 126/272 (46%), Gaps = 15/272 (5%)
Query: 164 ITTGFIANVYVGSSLISLYSRCALSGDAYRVFEE------MPERNVVSWTAIIAGFAQEW 217
+ G + Y ++LI+ Y + + A R+ + +P++ ++ ++I G E
Sbjct: 313 VNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQ--FTYRSLIDGLCHEG 370
Query: 218 RVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDN 277
+ L LF+ G +KPN Y +L+ G + ++ + G + N
Sbjct: 371 ETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFN 430
Query: 278 ALIAMYSKCGVIDDALYIFENMVGR----DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQ 333
L+ K G + DA + + M+ + D+ T+N +I GY+ + A+ + + M+
Sbjct: 431 ILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDN 490
Query: 334 GVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREA 393
GVDPD TY SLL+ ++ + +MVE G P L ++ +++ L R + EA
Sbjct: 491 GVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEA 550
Query: 394 RDFIENMP---VCPNAVIWGSLLSSSRLHGNV 422
+E M V P+AV +G+L+ +G++
Sbjct: 551 LGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDL 582
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 108/280 (38%), Gaps = 49/280 (17%)
Query: 167 GFIANVYVGSSLISLYSRCALSGD--AYRVFEEMP----ERNVVSWTAIIAGFAQE---- 216
G +VY S I + S C S A R+ M E NVV++ ++ GF +E
Sbjct: 141 GITPDVY--SFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKA 198
Query: 217 -----------WRVDMCLELFH-----LMRGSEMK---------------PNYFTYTSLL 245
V +CL F+ L + ++K PN FTY +
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFI 258
Query: 246 SACMGSGAL-GYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGR-- 302
G L G R C +I+ G + N LI K +A MV
Sbjct: 259 QGLCQRGELDGAVRMVGC-LIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGL 317
Query: 303 --DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQV 360
D T+N++IAGY + G+ Q A + + + G PD TY SL+ H G
Sbjct: 318 EPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALA 377
Query: 361 YFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENM 400
FN + G++P + Y+ ++ L G+I EA M
Sbjct: 378 LFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEM 417
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 114/280 (40%), Gaps = 15/280 (5%)
Query: 140 LSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP 199
L + + G D +G V+ + I+ G+ +++ + LI YS +A + + M
Sbjct: 432 LVNGLCKMGCVSDADGLVK---VMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVML 488
Query: 200 ER----NVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALG 255
+ +V ++ +++ G + + + +E + M PN FT+ LL + L
Sbjct: 489 DNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLD 548
Query: 256 YGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM-----VGRDVVTWNSM 310
G ++ + LI + K G +D A +F M V T+N +
Sbjct: 549 EALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNII 608
Query: 311 IAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGV 370
I + + A LF+EM+ + + PD TY ++ G V G + M+E+G
Sbjct: 609 IHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGF 668
Query: 371 QPKLDHYSCIVDLLGRAGLIREARDFIENM---PVCPNAV 407
P L +++ L + EA I M + P AV
Sbjct: 669 IPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 122/293 (41%), Gaps = 14/293 (4%)
Query: 209 IIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMG 268
II GFA+ L+L + + + + T S++SA SG ++ Q G
Sbjct: 275 IIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSG 334
Query: 269 FHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVV----TWNSMIAGYAQHGLAQEAI 324
NAL+ Y K G + DA + M R V T++ +I Y G + A
Sbjct: 335 IKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESAR 394
Query: 325 SLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLL 384
+ +EM V P++ + LL+ R G ++ M GV+P Y+ ++D
Sbjct: 395 IVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTF 454
Query: 385 GRAGLIREARDFIENM---PVCPNAVIWGSLLSSSRLHGNVWIG---IEAAESRLLLEPG 438
G+ + A + M + P+ V W +L+ HG + EA E R L
Sbjct: 455 GKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLP-- 512
Query: 439 CSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPN--PGSSWIEVKSKVHRF 489
C+ T + N Y W+ + R+ MK +G+ PN ++ ++V K RF
Sbjct: 513 CATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRF 565
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 128/320 (40%), Gaps = 45/320 (14%)
Query: 166 TGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVV----SWTAIIAGFAQEWRVDM 221
+G ++L+ Y + DA + EM +R V +++ +I + R +
Sbjct: 333 SGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWES 392
Query: 222 CLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIA 281
+ M +++PN F ++ LL+ G ++ +G N +I
Sbjct: 393 ARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVID 452
Query: 282 MYSKCGVIDDALYIFENMVGR----DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDP 337
+ K +D A+ F+ M+ D VTWN++I + +HG A +FE M ++G P
Sbjct: 453 TFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLP 512
Query: 338 DAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFI 397
A TY +++S + + M G+ P + ++ +VD+ G++G +A + +
Sbjct: 513 CATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECL 572
Query: 398 ENMP---VCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASVG 454
E M + P++ ++ +L+ N YA G
Sbjct: 573 EEMKSVGLKPSSTMYNALI----------------------------------NAYAQRG 598
Query: 455 WWNQVARVRKLMKDKGLKPN 474
Q ++M GLKP+
Sbjct: 599 LSEQAVNAFRVMTSDGLKPS 618
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 98/226 (43%), Gaps = 9/226 (3%)
Query: 204 VSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGR--GAH 261
+++ A+I A+ ++ L L MR + ++ Y+ ++ + S + +
Sbjct: 198 LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLY 257
Query: 262 CQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIF----ENMVGRDVVTWNSMIAGYAQH 317
+I + + + N +I ++K G AL + + T S+I+ A
Sbjct: 258 KEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADS 317
Query: 318 GLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHY 377
G EA +LFEE+ + G+ P Y +LL G +K+ + + M + GV P Y
Sbjct: 318 GRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTY 377
Query: 378 SCIVDLLGRAGLIREARDFIENMP---VCPNAVIWGSLLSSSRLHG 420
S ++D AG AR ++ M V PN+ ++ LL+ R G
Sbjct: 378 SLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRG 423
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 8/190 (4%)
Query: 191 AYRVFEEMPERN----VVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLS 246
A +FE M R ++ +I + + R D L M+ + PN T+T+L+
Sbjct: 498 AEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVD 557
Query: 247 ACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGR---- 302
SG ++ +G + NALI Y++ G+ + A+ F M
Sbjct: 558 VYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKP 617
Query: 303 DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYF 362
++ NS+I + + EA ++ + M + GV PD VTY +L+ + ++ V +
Sbjct: 618 SLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVY 677
Query: 363 NSMVEHGVQP 372
M+ G +P
Sbjct: 678 EEMIMSGCKP 687
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 91/220 (41%), Gaps = 11/220 (5%)
Query: 193 RVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSG 252
R+ E E + V+W +I + R + E+F M P TY ++++
Sbjct: 469 RMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQE 528
Query: 253 ALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM----VGRDVVTWN 308
+ ++ G + L+ +Y K G +DA+ E M + +N
Sbjct: 529 RWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYN 588
Query: 309 SMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEH 368
++I YAQ GL+++A++ F M G+ P + SL+++ E M E+
Sbjct: 589 ALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKEN 648
Query: 369 GVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPNAVI 408
GV+P + Y+ ++ L R D + +PV +I
Sbjct: 649 GVKPDVVTYTTLMKALIRV-------DKFQKVPVVYEEMI 681
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 139/296 (46%), Gaps = 16/296 (5%)
Query: 134 GVDVCFLSHA-VSSCGSKRDL-NGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDA 191
GV++ ++++ + +C + +L N +++ TG + + S+++ +YS+ +
Sbjct: 216 GVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEV 275
Query: 192 YRVFEEMP----ERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSA 247
++E + + ++++ + F + D + M+ ++KPN Y +LL A
Sbjct: 276 LSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEA 335
Query: 248 CMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGR----D 303
+G G R ++++ G AL+ +Y K DAL ++E M + D
Sbjct: 336 MGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMD 395
Query: 304 VVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVD--PDAVTYLSLLSSCRHGGLVKEGQVY 361
+ +N+++ A GL +EA LF +M K+ V PD +Y ++L+ GG ++
Sbjct: 396 FILYNTLLNMCADIGLEEEAERLFNDM-KESVQCRPDNFSYTAMLNIYGSGGKAEKAMEL 454
Query: 362 FNSMVEHGVQPKLDHYSCIVDLLGRAGLIREAR---DFIENMPVCPNAVIWGSLLS 414
F M++ GVQ + +C+V LG+A I + D V P+ + G LLS
Sbjct: 455 FEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLS 510
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 8/184 (4%)
Query: 292 ALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRH 351
AL + ++ V D +T++++I + L +AI FE M K G+ PD VTY ++L
Sbjct: 209 ALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSK 268
Query: 352 GGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGL---IREARDFIENMPVCPNAVI 408
G V+E + V G +P +S + + G AG IR +++M V PN V+
Sbjct: 269 SGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVV 328
Query: 409 WGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSA---TLQQLANLYASVGWWNQVARVRKL 465
+ +LL + G G+ + +LE G + TL L +Y W ++ +
Sbjct: 329 YNTLLEAMGRAGKP--GLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEE 386
Query: 466 MKDK 469
MK K
Sbjct: 387 MKAK 390
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 140/300 (46%), Gaps = 14/300 (4%)
Query: 190 DAYRVFEEMPER----NVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLL 245
DA +F+EM + NVV+++++I+ R L M ++ P+ FT+++L+
Sbjct: 274 DALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALI 333
Query: 246 SACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGR--- 302
A + G L + ++++ + ++LI + +D+A +FE MV +
Sbjct: 334 DAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF 393
Query: 303 -DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVY 361
DVVT+N++I G+ ++ +E + +F EM ++G+ + VTY L+ G Q
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 453
Query: 362 FNSMVEHGVQPKLDHYSCIVDLLGRAGLIREAR---DFIENMPVCPNAVIWGSLLSSSRL 418
F MV GV P + Y+ ++D L + G + +A ++++ + P + ++
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513
Query: 419 HGNVWIGIEAAESRLL--LEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPG 476
G V G + + L ++P A ++ + G + + K MK+ G PN G
Sbjct: 514 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISG-FCRKGSKEEADALFKEMKEDGTLPNSG 572
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 127/288 (44%), Gaps = 10/288 (3%)
Query: 125 MSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSR 184
+S ++E+++ DV S + + + L + + + ++ SSLI+ +
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Query: 185 CALSGDAYRVFEEMPER----NVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFT 240
+A ++FE M + +VV++ +I GF + RV+ +E+F M + N T
Sbjct: 374 HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 433
Query: 241 YTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM- 299
Y L+ +G + +++ G + N L+ K G ++ A+ +FE +
Sbjct: 434 YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 493
Query: 300 ---VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSS-CRHGGLV 355
+ + T+N MI G + G ++ LF + +GV PD V Y +++S CR G
Sbjct: 494 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS-K 552
Query: 356 KEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVC 403
+E F M E G P Y+ ++ R G + + I+ M C
Sbjct: 553 EEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSC 600
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 117/241 (48%), Gaps = 21/241 (8%)
Query: 190 DAYRVFEEM----PERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLL 245
DA +F EM P +++ ++ +++ A+ + D+ + L M+ + N++TY+ L+
Sbjct: 64 DAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILI 123
Query: 246 SACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMV----G 301
+ L +++++G+ + ++L+ Y I +A+ + + M
Sbjct: 124 NCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQ 183
Query: 302 RDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQV- 360
+ VT+N++I G H A EA++L + M+ +G PD VTY +++ GL K G
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVN-----GLCKRGDTD 238
Query: 361 ----YFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMP---VCPNAVIWGSLL 413
N M + ++P + Y+ I+D L + + +A + + M + PN V + SL+
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 414 S 414
S
Sbjct: 299 S 299
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 117/264 (44%), Gaps = 11/264 (4%)
Query: 167 GFIANVYVGSSLISLYSRCALSGDAYRVFEEMP----ERNVVSWTAIIAGFAQEWRVDMC 222
G N Y S LI+ + R + A V +M E N+V+ ++++ G+ R+
Sbjct: 111 GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEA 170
Query: 223 LELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAM 282
+ L M + +PN T+ +L+ +++ G L ++
Sbjct: 171 VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNG 230
Query: 283 YSKCGVIDDALYIFENM----VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPD 338
K G D A + M + V+ +N++I G ++ +A++LF+EM +G+ P+
Sbjct: 231 LCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPN 290
Query: 339 AVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIE 398
VTY SL+S + G + + M+E + P + +S ++D + G + EA +
Sbjct: 291 VVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD 350
Query: 399 NM---PVCPNAVIWGSLLSSSRLH 419
M + P+ V + SL++ +H
Sbjct: 351 EMVKRSIDPSIVTYSSLINGFCMH 374
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 90/196 (45%), Gaps = 4/196 (2%)
Query: 144 VSSCGSKRDLNGGVQYHCLAITTGFI--ANVYVGSSLISLYSRCALSGDAYRVFEEMPER 201
+ +C RD G Q H L GFI + Y+ SLI Y DA V ++
Sbjct: 200 LKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNA 259
Query: 202 NVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGY-GRGA 260
N V+W A + +E + F M +K N ++++L AC G G+
Sbjct: 260 NTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQV 319
Query: 261 HCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVVT-WNSMIAGYAQHGL 319
H I++GF S + LI MY K G + DA +F++ V+ WN+M+A Y Q+G+
Sbjct: 320 HANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGI 379
Query: 320 AQEAISLFEEMIKQGV 335
EAI L +M G+
Sbjct: 380 YIEAIKLLYQMKATGI 395
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 111/263 (42%), Gaps = 20/263 (7%)
Query: 178 LISLYSRCALSGDAYRVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELF-----HLMRGS 232
L+ ++ C ++F+ MP R+ SW + G + + LF H +G+
Sbjct: 129 LLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGA 188
Query: 233 EMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGF----HSYLHVDNALIAMYSKCGV 288
P++ +L AC G+ H ++GF SYL +LI Y +
Sbjct: 189 FKIPSWI-LGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYL--SGSLIRFYGEFRC 245
Query: 289 IDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSS 348
++DA + + + V W + + + G QE I F EM G+ + + ++L +
Sbjct: 246 LEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKA 305
Query: 349 C---RHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVCPN 405
C GG + GQ + ++ G + ++++ G+ G +++A ++ +
Sbjct: 306 CSWVSDGG--RSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETS 363
Query: 406 AVIWGSLLSSSRLHGNVWIGIEA 428
W ++++S +G I IEA
Sbjct: 364 VSCWNAMVASYMQNG---IYIEA 383
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 115/244 (47%), Gaps = 8/244 (3%)
Query: 167 GFIANVYVGSSLISLYSRCALSGDAYRVFEEMPER----NVVSWTAIIAGFAQEWRVDMC 222
GF A++ + ++LI + D ++ +M +R +VV+++A+I F +E ++
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREA 336
Query: 223 LELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAM 282
EL M + P+ TYTSL+ L ++ G + N LI
Sbjct: 337 EELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILING 396
Query: 283 YSKCGVIDDALYIFENMVGR----DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPD 338
Y K +IDD L +F M R D VT+N++I G+ + G + A LF+EM+ + V PD
Sbjct: 397 YCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPD 456
Query: 339 AVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIE 398
V+Y LL G ++ F + + ++ + Y+ I+ + A + +A D
Sbjct: 457 IVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFC 516
Query: 399 NMPV 402
++P+
Sbjct: 517 SLPL 520
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 103/219 (47%), Gaps = 8/219 (3%)
Query: 190 DAYRVFEEMP----ERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLL 245
+A+ +F EM + +++ +T +I GF R D +L M ++ P+ +++L+
Sbjct: 265 NAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALI 324
Query: 246 SACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMV----G 301
+ G L H ++IQ G +LI + K +D A ++ + MV G
Sbjct: 325 DCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG 384
Query: 302 RDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVY 361
++ T+N +I GY + L + + LF +M +GV D VTY +L+ G ++ +
Sbjct: 385 PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444
Query: 362 FNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENM 400
F MV V+P + Y ++D L G +A + E +
Sbjct: 445 FQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 107/229 (46%), Gaps = 9/229 (3%)
Query: 193 RVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSG 252
R+ E + N V++ ++ + + + +EL M ++K + Y+ ++ G
Sbjct: 202 RMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDG 261
Query: 253 ALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGR----DVVTWN 308
+L ++ GF + + + LI + G DD + +M+ R DVV ++
Sbjct: 262 SLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFS 321
Query: 309 SMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSS-CRHGGLVKEGQVYFNSMVE 367
++I + + G +EA L +EMI++G+ PD VTY SL+ C+ L K + + MV
Sbjct: 322 ALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHM-LDLMVS 380
Query: 368 HGVQPKLDHYSCIVDLLGRAGLIREARDFIENMP---VCPNAVIWGSLL 413
G P + ++ +++ +A LI + + M V + V + +L+
Sbjct: 381 KGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 119/289 (41%), Gaps = 47/289 (16%)
Query: 164 ITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV----VSWTAIIAGFAQEWRV 219
I +V S+LI + + +A + +EM +R + V++T++I GF +E ++
Sbjct: 309 IKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQL 368
Query: 220 DMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNAL 279
D + LM PN T+ L++ + + G ++ G + N L
Sbjct: 369 DKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTL 428
Query: 280 IAMYSKCGVIDDALYIFENMVGR----DVVTWNSMIAGYAQHGLAQEAISLFEEMIK--- 332
I + + G ++ A +F+ MV R D+V++ ++ G +G ++A+ +FE++ K
Sbjct: 429 IQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM 488
Query: 333 --------------------------------QGVDPDAVTYLSLLSS-CRHGGLVKEGQ 359
+GV PD TY ++ C+ G L E
Sbjct: 489 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSL-SEAD 547
Query: 360 VYFNSMVEHGVQPKLDHYSCIVDL-LGRAGLIREARDFIENMPVCPNAV 407
+ F M E G P Y+ ++ LG + A+ IE + C +V
Sbjct: 548 LLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAK-LIEEIKRCGFSV 595
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 90/215 (41%), Gaps = 35/215 (16%)
Query: 190 DAYRVFEEM----PERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLL 245
DA +F+EM P ++ ++ + + A+ + D+ L+L M + N +T + ++
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 246 SACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVV 305
+ C L A +II++G+ D V
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEP-------------------------------DTV 143
Query: 306 TWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSM 365
T++++I G G EA+ L + M++ G P +T +L++ G V + + + M
Sbjct: 144 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRM 203
Query: 366 VEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENM 400
VE G QP Y ++ ++ ++G A + + M
Sbjct: 204 VETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKM 238
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 149/335 (44%), Gaps = 51/335 (15%)
Query: 167 GFIANVYVGSSLISLYSRCALSGDAYRVFEEMPER----NVVSWTAIIAGFAQEWRVDMC 222
G +V+ SSLIS DA R+ +M ER NVV+++A+I F +E ++
Sbjct: 288 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 347
Query: 223 LELFHLMRGSEMKPNYFTYTSLLSA-CMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIA 281
+L+ M + P+ FTY+SL++ CM H L
Sbjct: 348 EKLYDEMIKRSIDPDIFTYSSLINGFCM--------------------HDRL-------- 379
Query: 282 MYSKCGVIDDALYIFENMVGRD----VVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDP 337
D+A ++FE M+ +D VVT++++I G+ + +E + LF EM ++G+
Sbjct: 380 --------DEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVG 431
Query: 338 DAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREAR--- 394
+ VTY +L+ Q+ F MV GV P + Y+ ++D L + G + +A
Sbjct: 432 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF 491
Query: 395 DFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLL--LEPGCSATLQQLANLYAS 452
++++ + P+ + ++ G V G E + L + P A ++ +
Sbjct: 492 EYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISG-FCR 550
Query: 453 VGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVH 487
G + + K MK+ G PN G+ +++++
Sbjct: 551 KGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLR 585
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 152/347 (43%), Gaps = 15/347 (4%)
Query: 165 TTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP----ERNVVSWTAIIAGFAQEWRVD 220
T G ++Y S I+ + R + A V +M E ++V+ ++++ G+ R+
Sbjct: 111 TLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRIS 170
Query: 221 MCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALI 280
+ L M KP+ FT+T+L+ Q++Q G L ++
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 230
Query: 281 AMYSKCGVIDDALYIFENM----VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVD 336
K G ID AL + + M + DVV +N++I G ++ +A++LF EM +G+
Sbjct: 231 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIR 290
Query: 337 PDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDF 396
PD TY SL+S + G + + M+E + P + +S ++D + G + EA
Sbjct: 291 PDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 350
Query: 397 IENM---PVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLEPGCSATLQQLANLYASV 453
+ M + P+ + SL++ +H + E L++ C + + L
Sbjct: 351 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE--LMISKDCFPNVVTYSTLIKGF 408
Query: 454 GWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHR-FEAQDKSNRRM 499
+V +L ++ + G++ + + +H F+A+D N +M
Sbjct: 409 CKAKRVEEGMELFREMSQRGLVGNT-VTYTTLIHGFFQARDCDNAQM 454
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 130/288 (45%), Gaps = 10/288 (3%)
Query: 125 MSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSR 184
+S ++E+++ +V S + + + L + + I +++ SSLI+ +
Sbjct: 316 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 375
Query: 185 CALSGDAYRVFEEMPER----NVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFT 240
+A +FE M + NVV+++ +I GF + RV+ +ELF M + N T
Sbjct: 376 HDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 435
Query: 241 YTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFE--- 297
YT+L+ + + Q++ +G H + N L+ K G + A+ +FE
Sbjct: 436 YTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ 495
Query: 298 -NMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSS-CRHGGLV 355
+ + D+ T+N MI G + G ++ LF + +GV P+ + Y +++S CR G
Sbjct: 496 RSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGS-K 554
Query: 356 KEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVC 403
+E M E G P Y+ ++ R G + + I+ M C
Sbjct: 555 EEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSC 602
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 115/241 (47%), Gaps = 21/241 (8%)
Query: 190 DAYRVFEEM----PERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLL 245
DA +F +M P ++V + +++ A+ + ++ + L M+ + + +TY+ +
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 246 SACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMV----G 301
+ L +++++G+ + ++L+ Y I DA+ + + MV
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185
Query: 302 RDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQV- 360
D T+ ++I G H A EA++L ++M+++G PD VTY ++++ GL K G +
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN-----GLCKRGDID 240
Query: 361 ----YFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDF---IENMPVCPNAVIWGSLL 413
M + ++ + Y+ I+D L + + +A + ++N + P+ + SL+
Sbjct: 241 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300
Query: 414 S 414
S
Sbjct: 301 S 301
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 97/215 (45%), Gaps = 10/215 (4%)
Query: 147 CGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPE----RN 202
C +KR + G++ G + N ++LI + + +A VF++M N
Sbjct: 409 CKAKR-VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 467
Query: 203 VVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHC 262
++++ ++ G + ++ + +F ++ S M+P+ +TY ++ +G + G C
Sbjct: 468 ILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFC 527
Query: 263 QIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDVV----TWNSMIAGYAQHG 318
+ G + N +I+ + + G ++A + + M + T+N++I + G
Sbjct: 528 NLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDG 587
Query: 319 LAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGG 353
+ + L +EM G DA T + L+++ H G
Sbjct: 588 DREASAELIKEMRSCGFAGDAST-IGLVTNMLHDG 621
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 123/295 (41%), Gaps = 51/295 (17%)
Query: 167 GFIANVYVGSSLISLYSRCALSGDAYRVFEEMPER----NVVSWTAIIAGFAQEWRV--- 219
G+ +VY +S+IS + +A V ++M R N V++ +I+ +E +V
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384
Query: 220 --------------DMC------------------LELFHLMRGSEMKPNYFTYTSLLSA 247
D+C +ELF MR +P+ FTY L+ +
Sbjct: 385 TELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDS 444
Query: 248 CMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM----VGRD 303
G L Q+ G + N LI + K +A IF+ M V R+
Sbjct: 445 LCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRN 504
Query: 304 VVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFN 363
VT+N++I G + ++A L ++MI +G PD TY SLL+ GG +K+
Sbjct: 505 SVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQ 564
Query: 364 SMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENM--------PVCPNAVIWG 410
+M +G +P + Y ++ L +AG + A + ++ P N VI G
Sbjct: 565 AMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQG 619
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 111/270 (41%), Gaps = 47/270 (17%)
Query: 191 AYRVFEEMPERNV----VSWTAIIAGFAQEWRVDMCLELFHLMRGSE-MKPNYFTYTSLL 245
A R+ E+M E VS I+ GF +E RV+ L M + P+ +T+ +L+
Sbjct: 243 ALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV 302
Query: 246 SACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRD-- 303
+ +G + + ++Q G+ ++ N++I+ K G + +A+ + + M+ RD
Sbjct: 303 NGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS 362
Query: 304 -------------------------------------VVTWNSMIAGYAQHGLAQEAISL 326
V T+NS+I G + A+ L
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422
Query: 327 FEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGR 386
FEEM +G +PD TY L+ S G + E M G + Y+ ++D +
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482
Query: 387 AGLIREARDFIENMP---VCPNAVIWGSLL 413
A REA + + M V N+V + +L+
Sbjct: 483 ANKTREAEEIFDEMEVHGVSRNSVTYNTLI 512
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 124/281 (44%), Gaps = 15/281 (5%)
Query: 202 NVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAH 261
+V ++ +I + ++ + + M + P+ T+T+++ + G L
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIR 247
Query: 262 CQIIQMGFHSYLHVD-NALIAMYSKCGVIDDALYIFENMVGRD-----VVTWNSMIAGYA 315
Q+++ G S+ +V N ++ + K G ++DAL + M +D T+N+++ G
Sbjct: 248 EQMVEFGC-SWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306
Query: 316 QHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLD 375
+ G + AI + + M+++G DPD TY S++S G VKE + M+ P
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTV 366
Query: 376 HYSCIVDLLGRAGLIREARDF---IENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESR 432
Y+ ++ L + + EA + + + + P+ + SL+ L N + +E E
Sbjct: 367 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEE- 425
Query: 433 LLLEPGCSA---TLQQLANLYASVGWWNQVARVRKLMKDKG 470
+ GC T L + S G ++ + K M+ G
Sbjct: 426 -MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSG 465
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 127/285 (44%), Gaps = 15/285 (5%)
Query: 125 MSSVMEQELGVDVCFLSHAVSSCGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSR 184
+S ++E+++ +V S + + + L + + I +++ SSLI+ +
Sbjct: 314 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 373
Query: 185 CALSGDAYRVFEEMPER----NVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFT 240
+A +FE M + NVV++ +I GF + RVD +ELF M + N T
Sbjct: 374 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT 433
Query: 241 YTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENM- 299
YT+L+ + + Q++ G + + L+ G ++ AL +FE +
Sbjct: 434 YTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQ 493
Query: 300 ---VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVK 356
+ D+ T+N MI G + G ++ LF + +GV P+ VTY +++S GL +
Sbjct: 494 RSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKE 553
Query: 357 EGQVYFNSMVEHGVQPKLDHYSCIV-------DLLGRAGLIREAR 394
E F M E G P Y+ ++ D A LIRE R
Sbjct: 554 EADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 598
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 137/301 (45%), Gaps = 14/301 (4%)
Query: 190 DAYRVFEEMPER----NVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLL 245
DA +F EM + NVV++ ++I R L M ++ PN T+++L+
Sbjct: 274 DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 333
Query: 246 SACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRD-- 303
A + G L + ++I+ + ++LI + +D+A ++FE M+ +D
Sbjct: 334 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 393
Query: 304 --VVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVY 361
VVT+N++I G+ + E + LF EM ++G+ + VTY +L+ Q+
Sbjct: 394 PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIV 453
Query: 362 FNSMVEHGVQPKLDHYSCIVDLLGRAGLIREAR---DFIENMPVCPNAVIWGSLLSSSRL 418
F MV GV P + YS ++D L G + A ++++ + P+ + ++
Sbjct: 454 FKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCK 513
Query: 419 HGNVWIGIEAAESRLL--LEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPG 476
G V G + S L ++P T + + + G + + + MK++G P+ G
Sbjct: 514 AGKVEDGWDLFCSLSLKGVKPNV-VTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSG 572
Query: 477 S 477
+
Sbjct: 573 T 573
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 115/240 (47%), Gaps = 21/240 (8%)
Query: 190 DAYRVFEEM----PERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLL 245
DA +F +M P ++V ++ +++ A+ + D+ + L M+ + N +TY+ L+
Sbjct: 64 DAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILI 123
Query: 246 SACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGR--- 302
+ L +++++G+ + N+L+ + I DA+ + MV
Sbjct: 124 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQ 183
Query: 303 -DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQV- 360
D T+N++I G +H A EA++L + M+ +G PD VTY +++ GL K G +
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVN-----GLCKRGDID 238
Query: 361 ----YFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDF---IENMPVCPNAVIWGSLL 413
M + ++P + Y+ I+D L + +A + ++N + PN V + SL+
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 115/264 (43%), Gaps = 11/264 (4%)
Query: 167 GFIANVYVGSSLISLYSRCALSGDAYRVFEEMP----ERNVVSWTAIIAGFAQEWRVDMC 222
G N+Y S LI+ + R + A V +M E ++V+ +++ GF R+
Sbjct: 111 GISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 170
Query: 223 LELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAM 282
+ L M +P+ FT+ +L+ +++ G L ++
Sbjct: 171 VSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNG 230
Query: 283 YSKCGVIDDALYIFENM----VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPD 338
K G ID AL + + M + VV +N++I + +A++LF EM +G+ P+
Sbjct: 231 LCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPN 290
Query: 339 AVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIE 398
VTY SL+ + G + + M+E + P + +S ++D + G + EA +
Sbjct: 291 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 350
Query: 399 NM---PVCPNAVIWGSLLSSSRLH 419
M + P+ + SL++ +H
Sbjct: 351 EMIKRSIDPDIFTYSSLINGFCMH 374
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 113/269 (42%), Gaps = 10/269 (3%)
Query: 215 QEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLH 274
+ ++D + LF M S P+ ++ LLSA Q+ +G L+
Sbjct: 58 NDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 117
Query: 275 VDNALIAMYSKCGVIDDALYIFENMVG----RDVVTWNSMIAGYAQHGLAQEAISLFEEM 330
+ LI + + + AL + M+ D+VT NS++ G+ +A+SL +M
Sbjct: 118 TYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQM 177
Query: 331 IKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLI 390
++ G PD+ T+ +L+ E + MV G QP L Y +V+ L + G I
Sbjct: 178 VEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDI 237
Query: 391 REARDFIENM---PVCPNAVIWGSLLSSSRLHGNV--WIGIEAAESRLLLEPGCSATLQQ 445
A ++ M + P VI+ +++ + + NV + + + P T
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNV-VTYNS 296
Query: 446 LANLYASVGWWNQVARVRKLMKDKGLKPN 474
L + G W+ +R+ M ++ + PN
Sbjct: 297 LIRCLCNYGRWSDASRLLSDMIERKINPN 325
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 136/331 (41%), Gaps = 57/331 (17%)
Query: 165 TTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMP----ERNVVSWTAIIAGFAQEWRVD 220
+TG I +V + L+ Y + + + +++EM E N ++ +I+G + VD
Sbjct: 813 STGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVD 872
Query: 221 MCLELFH-LMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNAL 279
L+L++ LM + P TY L+
Sbjct: 873 DALDLYYDLMSDRDFSPTACTYGPLIDG-------------------------------- 900
Query: 280 IAMYSKCGVIDDALYIFENMVG----RDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGV 335
SK G + +A +FE M+ + +N +I G+ + G A A +LF+ M+K+GV
Sbjct: 901 ---LSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGV 957
Query: 336 DPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARD 395
PD TY L+ G V EG YF + E G+ P + Y+ I++ LG++ + EA
Sbjct: 958 RPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALV 1017
Query: 396 FIENMP----VCPNAVIWGSLLSSSRLHGNVWIGIEAAE-----SRLLLEPGCSATLQQL 446
M + P+ + SL+ + + G V EA + R LEP T L
Sbjct: 1018 LFNEMKTSRGITPDLYTYNSLILNLGIAGMVE---EAGKIYNEIQRAGLEPNV-FTFNAL 1073
Query: 447 ANLYASVGWWNQVARVRKLMKDKGLKPNPGS 477
Y+ G V + M G PN G+
Sbjct: 1074 IRGYSLSGKPEHAYAVYQTMVTGGFSPNTGT 1104
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 123/275 (44%), Gaps = 11/275 (4%)
Query: 151 RDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNVV----SW 206
RDL+ Q+ G + +V + L+ + G+A+ + M ++ ++ ++
Sbjct: 342 RDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTY 401
Query: 207 TAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQ 266
+I G + R+D LELF M +KP +TY + SG ++
Sbjct: 402 NTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKT 461
Query: 267 MGFHSYLHVDNALIAMYSKCGVIDDALYIFENM--VG--RDVVTWNSMIAGYAQHGLAQE 322
G + NA + +K G +A IF + +G D VT+N M+ Y++ G E
Sbjct: 462 KGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDE 521
Query: 323 AISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVD 382
AI L EM++ G +PD + SL+++ V E F M E ++P + Y+ ++
Sbjct: 522 AIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLA 581
Query: 383 LLGRAGLIREARDFIENM---PVCPNAVIWGSLLS 414
LG+ G I+EA + E M PN + + +L
Sbjct: 582 GLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFD 616
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 145/359 (40%), Gaps = 53/359 (14%)
Query: 167 GFIANVYVGSSLISLYSRCALSGDAYRVFEEMPER----NVVSWTAIIAGFAQEWRVDMC 222
G Y I Y + S A FE+M + N+V+ A + A+ R
Sbjct: 428 GVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREA 487
Query: 223 LELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAM 282
++F+ ++ + P+ TY ++ G + ++++ G + V N+LI
Sbjct: 488 KQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINT 547
Query: 283 YSKCGVIDDALYIFENM----VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPD 338
K +D+A +F M + VVT+N+++AG ++G QEAI LFE M+++G P+
Sbjct: 548 LYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPN 607
Query: 339 AVTYLSLLSS-CRHG-----------------------------GLVKEGQV-----YFN 363
+T+ +L C++ GLVK GQV +F+
Sbjct: 608 TITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFH 667
Query: 364 SMVEHGVQPKLDHYSCIVDLLGRAGLIREA----RDFIENMPVCPNAVIWGSLLSSSRLH 419
M + V P ++ + +A LI +A +F+ N P + W L+ S
Sbjct: 668 QM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAE 726
Query: 420 GNVWIGIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVR----KLMKDKGLKPN 474
+ + +E RL+ C L + N V+ R K KD G++P
Sbjct: 727 AGIDNAVSFSE-RLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPK 784
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 131/324 (40%), Gaps = 20/324 (6%)
Query: 167 GFIANVYVGSSLISLYSRCALSGDAYRVFEEMP----ERNVVSWTAIIAGFAQEWRVDMC 222
GF+ N Y + LI L + +A V+ M ++ ++++++ G + +D
Sbjct: 183 GFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSV 242
Query: 223 LELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAM 282
+ L M +KPN +T+T + +G + ++ G + LI
Sbjct: 243 MGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDA 302
Query: 283 YSKCGVIDDALYIFENM-VGR---DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPD 338
+D A +FE M GR D VT+ +++ ++ + + EM K G PD
Sbjct: 303 LCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPD 362
Query: 339 AVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIE 398
VT+ L+ + G E + M + G+ P L Y+ ++ L R + +A +
Sbjct: 363 VVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFG 422
Query: 399 NMP---VCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLL--LEP---GCSATLQQLANLY 450
NM V P A + + G+ +E E + P C+A+L L
Sbjct: 423 NMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSL---- 478
Query: 451 ASVGWWNQVARVRKLMKDKGLKPN 474
A G + ++ +KD GL P+
Sbjct: 479 AKAGRDREAKQIFYGLKDIGLVPD 502
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 9/209 (4%)
Query: 178 LISLYSRCALSGDAYRVFEEMPE----RNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSE 233
LI S+ +A ++FE M + N + +I GF + D LF M
Sbjct: 897 LIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG 956
Query: 234 MKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDAL 293
++P+ TY+ L+ G + G ++ + G + + N +I K +++AL
Sbjct: 957 VRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEAL 1016
Query: 294 YIFENM-----VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSS 348
+F M + D+ T+NS+I G+ +EA ++ E+ + G++P+ T+ +L+
Sbjct: 1017 VLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRG 1076
Query: 349 CRHGGLVKEGQVYFNSMVEHGVQPKLDHY 377
G + + +MV G P Y
Sbjct: 1077 YSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 119/300 (39%), Gaps = 48/300 (16%)
Query: 171 NVYVGSSLISLYSRCALSGDAYRVFEEMPER----NVVSWTAIIAGFAQEWRVDMCLELF 226
+V V +SLI+ + +A+++F M E VV++ ++AG + ++ +ELF
Sbjct: 537 DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELF 596
Query: 227 HLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKC 286
M PN T+ +L + + +++ MG + N +I K
Sbjct: 597 EGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKN 656
Query: 287 GVIDDALYIFENM---VGRDVVTWNSMIAGYAQHGLAQEA-------------------- 323
G + +A+ F M V D VT +++ G + L ++A
Sbjct: 657 GQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFW 716
Query: 324 ----------------ISLFEEMIKQGV--DPDAVTYLSLLSSCRHGGLVKEGQVYFNSM 365
+S E ++ G+ D D++ + SC+H + ++
Sbjct: 717 EDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFT 776
Query: 366 VEHGVQPKLDHYSCIVDLLGRAGLIREARDF---IENMPVCPNAVIWGSLLSSSRLHGNV 422
+ GVQPKL Y+ ++ L A +I A+D +++ P+ + LL + G +
Sbjct: 777 KDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKI 836
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 109/292 (37%), Gaps = 57/292 (19%)
Query: 234 MKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVI---- 289
++P TY L+ + + + + Q+ G + N L+ Y K G I
Sbjct: 781 VQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELF 840
Query: 290 -------------------------------DDALYIFEN-MVGRD----VVTWNSMIAG 313
DDAL ++ + M RD T+ +I G
Sbjct: 841 ELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDG 900
Query: 314 YAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPK 373
++ G EA LFE M+ G P+ Y L++ G F MV+ GV+P
Sbjct: 901 LSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPD 960
Query: 374 LDHYSCIVDLLGRAGLIREARDFIENMP--------VCPNAVIWGSLLSSSRLHGNVWIG 425
L YS +VD L G + E + + + VC N +I G L S RL + +
Sbjct: 961 LKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIING-LGKSHRLEEALVLF 1019
Query: 426 IEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKL---MKDKGLKPN 474
E SR G + L +L ++G V K+ ++ GL+PN
Sbjct: 1020 NEMKTSR-----GITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPN 1066
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 140/344 (40%), Gaps = 38/344 (11%)
Query: 164 ITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPE----RNVVSWTAIIAGFAQEWRV 219
I GFI + S +++ + A+ +FEEM +V ++T ++ F + +
Sbjct: 475 IGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLI 534
Query: 220 DMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNAL 279
+ + F+ MR PN TYT+L+ A + + + Y ++ G + +AL
Sbjct: 535 EQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSAL 594
Query: 280 IAMYSKCGVIDDALYIFENMVGR--------------------DVVTWNSMIAGYAQHGL 319
I + K G ++ A IFE M G +VVT+ +++ G+ +
Sbjct: 595 IDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHR 654
Query: 320 AQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSC 379
+EA L + M +G +P+ + Y +L+ G + E Q M EHG L YS
Sbjct: 655 VEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSS 714
Query: 380 IVDLLGRAGLIREARDFIENM---PVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLL- 435
++D + A + M PN VI+ ++ G +G +L+
Sbjct: 715 LIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMID-----GLCKVGKTDEAYKLMQM 769
Query: 436 --EPGCS---ATLQQLANLYASVGWWNQVARVRKLMKDKGLKPN 474
E GC T + + + +G + + M KG+ PN
Sbjct: 770 MEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPN 813
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 114/247 (46%), Gaps = 19/247 (7%)
Query: 171 NVYVGSSLISLYSRCALSGDAYRVFEEMPER----NVVSWTAIIAGFAQEWRVDMCLELF 226
NV + + +I + + +AY++ + M E+ NVV++TA+I GF +++ CLEL
Sbjct: 743 NVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELL 802
Query: 227 HLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSK- 285
M + PNY TY L+ C +GAL ++ Q + ++ +I ++K
Sbjct: 803 ERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE 862
Query: 286 ----CGVIDDALYIFENMVGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQG---VDPD 338
G++D+ I ++ + + +I + + A+ L EE+ VD
Sbjct: 863 FIESLGLLDE---IGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYS 919
Query: 339 AVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREA---RD 395
+ TY SL+ S V+ F+ M + GV P++ + ++ L R I EA D
Sbjct: 920 S-TYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 978
Query: 396 FIENMPV 402
FI +M +
Sbjct: 979 FISHMEI 985
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 100/245 (40%), Gaps = 43/245 (17%)
Query: 292 ALYIFENM----VGRDVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLS 347
A +FE M + DV T+ M+ + + GL ++A F EM + G P+ VTY +L+
Sbjct: 502 AFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIH 561
Query: 348 SCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVC---- 403
+ V F +M+ G P + YS ++D +AG + +A E M C
Sbjct: 562 AYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM--CGSKD 619
Query: 404 -----------------PNAVIWGSLLSS-SRLHGNVWIGIEAAESRLLLEP----GCSA 441
PN V +G+LL + H E+R LL+ GC
Sbjct: 620 VPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSH-------RVEEARKLLDAMSMEGCEP 672
Query: 442 ---TLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVHRFEAQDKSNRR 498
L + VG ++ V+ M + G P ++ + + + + QD +++
Sbjct: 673 NQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGF-PATLYTYSSLIDRYFKVKRQDLASKV 731
Query: 499 MSDIL 503
+S +L
Sbjct: 732 LSKML 736
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 136/298 (45%), Gaps = 11/298 (3%)
Query: 200 ERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRG 259
E +VV + II G + +D +LF+ M +KP+ FTY L+S G
Sbjct: 247 EADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASR 306
Query: 260 AHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGR-----DVVTWNSMIAGY 314
+++ + L NALI + K G + +A +++ MV DVV +N++I G+
Sbjct: 307 LLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGF 366
Query: 315 AQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKL 374
++ +E + +F EM ++G+ + VTY +L+ Q+ F MV GV P +
Sbjct: 367 CKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDI 426
Query: 375 DHYSCIVDLLGRAGLIREAR---DFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAES 431
Y+ ++D L G + A ++++ + + V + +++ + G V G + S
Sbjct: 427 MTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCS 486
Query: 432 RLL--LEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKGLKPNPGSSWIEVKSKVH 487
L ++P T + + + G + + MK+ G PN G+ +++++
Sbjct: 487 LSLKGVKPNV-VTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLR 543
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 110/237 (46%), Gaps = 9/237 (3%)
Query: 176 SSLISLYSRCALSGDAYRVFEEMPER-----NVVSWTAIIAGFAQEWRVDMCLELFHLMR 230
++LI + + +A ++++EM + +VV++ +I GF + RV+ +E+F M
Sbjct: 324 NALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMS 383
Query: 231 GSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVID 290
+ N TYT+L+ + + Q++ G H + N L+ G ++
Sbjct: 384 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVE 443
Query: 291 DALYIFENMVGRD----VVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLL 346
AL +FE M RD +VT+ +MI + G ++ LF + +GV P+ VTY +++
Sbjct: 444 TALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMM 503
Query: 347 SSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMPVC 403
S GL +E F M E G P Y+ ++ R G + + I+ M C
Sbjct: 504 SGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSC 560
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 132/285 (46%), Gaps = 19/285 (6%)
Query: 165 TTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV----VSWTAIIAGFAQEWRVD 220
T G +V+ + LIS DA R+ +M E+N+ V + A+I F +E ++
Sbjct: 278 TKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLV 337
Query: 221 MCLELF-HLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNAL 279
+L+ +++ P+ Y +L+ + G ++ Q G L
Sbjct: 338 EAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTL 397
Query: 280 IAMYSKCGVIDDALYIFENMVGR----DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGV 335
I + + D+A +F+ MV D++T+N ++ G +G + A+ +FE M K+ +
Sbjct: 398 IHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDM 457
Query: 336 DPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREAR- 394
D VTY +++ + G V++G F S+ GV+P + Y+ ++ R GL EA
Sbjct: 458 KLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 517
Query: 395 ---DFIENMPVCPNAVIWGSLLSSSRLHGNVWIGIEAAESRLLLE 436
+ E+ P+ PN+ + +L+ + G+ EAA + L+ E
Sbjct: 518 LFVEMKEDGPL-PNSGTYNTLIRARLRDGD-----EAASAELIKE 556
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 114/241 (47%), Gaps = 21/241 (8%)
Query: 190 DAYRVFEEM----PERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLL 245
DA +F +M P ++V ++ +++ A+ + D+ + L M+ + N +TY+ +
Sbjct: 58 DAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFI 117
Query: 246 SACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGR--- 302
+ L +++++G+ + N+L+ + I +A+ + + MV
Sbjct: 118 NYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 177
Query: 303 -DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQV- 360
D VT+ +++ G QH A EA++L E M+ +G PD VTY ++++ GL K G+
Sbjct: 178 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN-----GLCKRGEPD 232
Query: 361 ----YFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMP---VCPNAVIWGSLL 413
N M + ++ + Y+ I+D L + + +A D M + P+ + L+
Sbjct: 233 LALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLI 292
Query: 414 S 414
S
Sbjct: 293 S 293
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 114/270 (42%), Gaps = 12/270 (4%)
Query: 215 QEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLH 274
Q+ ++D + LF M S P+ ++ LLSA Q+ +G L+
Sbjct: 52 QDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 111
Query: 275 VDNALIAMYSKCGVIDDALYIFENMV----GRDVVTWNSMIAGYAQHGLAQEAISLFEEM 330
+ I + + + AL I M+ G +VT NS++ G+ EA++L ++M
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 331 IKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLI 390
++ G PD VT+ +L+ E MV G QP L Y +++ L + G
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231
Query: 391 REARDFIENM---PVCPNAVIWGSL---LSSSRLHGNVWIGIEAAESRLLLEPGCSATLQ 444
A + + M + + VI+ ++ L + + + E++ ++P T
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETK-GIKPDV-FTYN 289
Query: 445 QLANLYASVGWWNQVARVRKLMKDKGLKPN 474
L + + G W+ +R+ M +K + P+
Sbjct: 290 PLISCLCNYGRWSDASRLLSDMLEKNINPD 319
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 88/195 (45%), Gaps = 9/195 (4%)
Query: 167 GFIANVYVGSSLISLYSRCALSGDAYRVFEEMPER----NVVSWTAIIAGFAQEWRVDMC 222
G + N ++LI + + +A VF++M +++++ ++ G V+
Sbjct: 386 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETA 445
Query: 223 LELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAM 282
L +F M+ +MK + TYT+++ A +G + G C + G + +++
Sbjct: 446 LVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSG 505
Query: 283 YSKCGVIDDALYIFENMVGRDVV----TWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPD 338
+ + G+ ++A +F M + T+N++I + G + L +EM G D
Sbjct: 506 FCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGD 565
Query: 339 AVTYLSLLSSCRHGG 353
A T+ L+++ H G
Sbjct: 566 ASTF-GLVTNMLHDG 579
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 114/245 (46%), Gaps = 10/245 (4%)
Query: 167 GFIANVYVGSSLISLYSRCALSGDAYRVFEEMPER----NVVSWTAIIAGFAQEWRVDMC 222
GF A++ ++LI + D ++ +M +R NVV+++ +I F +E ++
Sbjct: 293 GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREA 352
Query: 223 LELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFHSYLHVDNALIAM 282
+L M + PN TY SL+ L +I G + N LI
Sbjct: 353 DQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILING 412
Query: 283 YSKCGVIDDALYIFENMVGRDV----VTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPD 338
Y K IDD L +F M R V VT+N+++ G+ Q G + A LF+EM+ + V PD
Sbjct: 413 YCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPD 472
Query: 339 AVTYLSLLSS-CRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFI 397
V+Y LL C +G L K ++ F + + ++ + Y I+ + A + +A D
Sbjct: 473 IVSYKILLDGLCDNGELEKALEI-FGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLF 531
Query: 398 ENMPV 402
++P+
Sbjct: 532 CSLPL 536
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 127/290 (43%), Gaps = 15/290 (5%)
Query: 153 LNGGVQYHCLAIT----TGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPERNV----V 204
LNG V + I TGF N ++++ + + A + +M ERN+ V
Sbjct: 205 LNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAV 264
Query: 205 SWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQI 264
++ II G ++ +D LF+ M K + TY +L+ +G G +
Sbjct: 265 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDM 324
Query: 265 IQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGRDV----VTWNSMIAGYAQHGLA 320
I+ + + LI + K G + +A + + M+ R + +T+NS+I G+ +
Sbjct: 325 IKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRL 384
Query: 321 QEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNSMVEHGVQPKLDHYSCI 380
+EAI + + MI +G DPD +T+ L++ + +G F M GV Y+ +
Sbjct: 385 EEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTL 444
Query: 381 VDLLGRAGLIREARDFIENM---PVCPNAVIWGSLLSSSRLHGNVWIGIE 427
V ++G + A+ + M V P+ V + LL +G + +E
Sbjct: 445 VQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALE 494
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 117/279 (41%), Gaps = 43/279 (15%)
Query: 165 TTGFIANVYVGSSLISLYSRCALSGDAY----RVFEEMPERNVVSWTAIIAGFAQEWRVD 220
+ G ++Y S +I+ + RC A+ ++ + E + V + ++ G E RV
Sbjct: 116 SKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVS 175
Query: 221 MCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHCQIIQMGFH----SYLHVD 276
LEL M KP T +L++ +G + ++++ GF +Y V
Sbjct: 176 EALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVL 235
Query: 277 NAL-------IAM-----------------YS-------KCGVIDDALYIFENMVGR--- 302
N + +AM YS K G +D+A +F M +
Sbjct: 236 NVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFK 295
Query: 303 -DVVTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVY 361
D++T+N++I G+ G + L +MIK+ + P+ VT+ L+ S G ++E
Sbjct: 296 ADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQL 355
Query: 362 FNSMVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENM 400
M++ G+ P Y+ ++D + + EA ++ M
Sbjct: 356 LKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 91/206 (44%), Gaps = 13/206 (6%)
Query: 147 CGSKRDLNGGVQYHCLAITTGFIANVYVGSSLISLYSRCALSGDAYRVFEEMPER----N 202
C R L +Q L I+ G ++ + LI+ Y + D +F EM R N
Sbjct: 379 CKENR-LEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIAN 437
Query: 203 VVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSGALGYGRGAHC 262
V++ ++ GF Q ++++ +LF M ++P+ +Y LL +G L
Sbjct: 438 TVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFG 497
Query: 263 QIIQMGFHSYLHVDNALIAMYSKCGV--IDDALYIFENM----VGRDVVTWNSMIAGYAQ 316
+I + L + +I ++ C +DDA +F ++ V D +N MI+ +
Sbjct: 498 KIEKSKME--LDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCR 555
Query: 317 HGLAQEAISLFEEMIKQGVDPDAVTY 342
+A LF +M ++G PD +TY
Sbjct: 556 KDSLSKADILFRKMTEEGHAPDELTY 581
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 120/304 (39%), Gaps = 37/304 (12%)
Query: 193 RVFEEMPERNVVSWTAIIAGFAQEWRVDMCLELFHLMRGSEMKPNYFTYTSLLSACMGSG 252
R F +RN+ + +G + D ++LF M S P + L SA +
Sbjct: 44 RGFSTFSDRNLSYRDKLSSGLVG-IKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTK 102
Query: 253 ALGYGRGAHCQIIQMGFHSYLHVDNALIAMYSKCGVIDDALYIFENMVGR--------DV 304
Q+ G ++ + +I + +C + Y F M G+ D
Sbjct: 103 QYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLS---YAFSTM-GKIMKLGYEPDT 158
Query: 305 VTWNSMIAGYAQHGLAQEAISLFEEMIKQGVDPDAVTYLSLLSSCRHGGLVKEGQVYFNS 364
V +N+++ G EA+ L + M++ G P +T +L++ G V + V +
Sbjct: 159 VIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDR 218
Query: 365 MVEHGVQPKLDHYSCIVDLLGRAGLIREARDFIENMP---VCPNAVIW----------GS 411
MVE G QP Y +++++ ++G A + + M + +AV + GS
Sbjct: 219 MVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGS 278
Query: 412 LLSSSRLHGNVWI-GIEAAESRLLLEPGCSATLQQLANLYASVGWWNQVARVRKLMKDKG 470
L ++ L + I G +A T L + + G W+ A++ + M +
Sbjct: 279 LDNAFNLFNEMEIKGFKAD----------IITYNTLIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 471 LKPN 474
+ PN
Sbjct: 329 ISPN 332