Miyakogusa Predicted Gene

Lj0g3v0304679.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0304679.1 Non Chatacterized Hit- tr|D7L9M0|D7L9M0_ARALL
Putative uncharacterized protein (Fragment)
OS=Arabido,54.43,0.0000000000005,seg,NULL; TPX2,Xklp2 targeting
protein,CUFF.20497.1
         (117 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G35880.1 | Symbols:  | TPX2 (targeting protein for Xklp2) pro...    50   2e-07

>AT2G35880.1 | Symbols:  | TPX2 (targeting protein for Xklp2)
           protein family | chr2:15063204-15065259 REVERSE
           LENGTH=432
          Length = 432

 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 41/75 (54%), Gaps = 1/75 (1%)

Query: 29  FNANEPQKVQLHTKLKEKAGTEIRKLSQSFCFKARPLPDFYKERPASINETRKNPWPHSE 88
            +A E +K  L  K KE    EI++L +S  FKA P+P FYKE P  + E +K P    +
Sbjct: 268 IHAKEVEKTNLQAKSKESQEEEIKRLRKSLTFKAGPMPSFYKEPPPKV-ELKKIPTTRPK 326

Query: 89  SPKEGRKPIPCMAEG 103
           SPK GR+     A G
Sbjct: 327 SPKLGRRKSSSDATG 341