Miyakogusa Predicted Gene

Lj0g3v0304169.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0304169.1 tr|A8IMC1|A8IMC1_CHLRE Predicted protein
(Fragment) OS=Chlamydomonas reinhardtii
GN=CHLREDRAFT_14484,55.68,1e-18,Abi,CAAX amino terminal protease;
YHET-RELATED,NULL; ABHYDROLASE DOMAIN-CONTAINING
PROTEIN,NULL,CUFF.20460.1
         (128 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G14270.2 | Symbols:  | CAAX amino terminal protease family pr...   157   2e-39
AT1G14270.4 | Symbols:  | CAAX amino terminal protease family pr...   157   2e-39
AT1G14270.3 | Symbols:  | CAAX amino terminal protease family pr...   157   2e-39
AT1G14270.1 | Symbols:  | CAAX amino terminal protease family pr...   155   7e-39
AT5G60750.1 | Symbols:  | CAAX amino terminal protease family pr...    69   8e-13
AT2G20725.1 | Symbols:  | CAAX amino terminal protease family pr...    58   2e-09

>AT1G14270.2 | Symbols:  | CAAX amino terminal protease family
           protein | chr1:4875099-4876503 REVERSE LENGTH=247
          Length = 247

 Score =  157 bits (397), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 79/129 (61%), Positives = 101/129 (78%), Gaps = 5/129 (3%)

Query: 1   MSFFNEESQETSTRKTDPLVRLLP-VGSSYVRTACVLASTGLLAPLLEETVFRGFVMASL 59
           +S F  E+ E   R+ D L++LLP +GSS + T  ++  TG+LAPLLEETVFRGF M SL
Sbjct: 109 LSVFRTEAPE---REVDSLMKLLPLIGSSNISTLSLVGITGILAPLLEETVFRGFFMVSL 165

Query: 60  TKWVPTPVAVLISAAVFSLCHFTPGVFPWLFVLGTFLGISYAQTRNLLTPITIHAFWNIG 119
           TKWVPTP+A++IS+A F+L HFTPG FP LF+LG+ LG+SYAQTRNL+TP+ IH FWN G
Sbjct: 166 TKWVPTPIAIIISSAAFALAHFTPGEFPQLFILGSVLGLSYAQTRNLITPMVIHGFWNSG 225

Query: 120 -LLVLTLLQ 127
            +L+LT LQ
Sbjct: 226 VILLLTFLQ 234


>AT1G14270.4 | Symbols:  | CAAX amino terminal protease family
           protein | chr1:4875099-4876443 REVERSE LENGTH=227
          Length = 227

 Score =  157 bits (397), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 79/129 (61%), Positives = 101/129 (78%), Gaps = 5/129 (3%)

Query: 1   MSFFNEESQETSTRKTDPLVRLLP-VGSSYVRTACVLASTGLLAPLLEETVFRGFVMASL 59
           +S F  E+ E   R+ D L++LLP +GSS + T  ++  TG+LAPLLEETVFRGF M SL
Sbjct: 89  LSVFRTEAPE---REVDSLMKLLPLIGSSNISTLSLVGITGILAPLLEETVFRGFFMVSL 145

Query: 60  TKWVPTPVAVLISAAVFSLCHFTPGVFPWLFVLGTFLGISYAQTRNLLTPITIHAFWNIG 119
           TKWVPTP+A++IS+A F+L HFTPG FP LF+LG+ LG+SYAQTRNL+TP+ IH FWN G
Sbjct: 146 TKWVPTPIAIIISSAAFALAHFTPGEFPQLFILGSVLGLSYAQTRNLITPMVIHGFWNSG 205

Query: 120 -LLVLTLLQ 127
            +L+LT LQ
Sbjct: 206 VILLLTFLQ 214


>AT1G14270.3 | Symbols:  | CAAX amino terminal protease family
           protein | chr1:4875099-4876443 REVERSE LENGTH=227
          Length = 227

 Score =  157 bits (397), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 79/129 (61%), Positives = 101/129 (78%), Gaps = 5/129 (3%)

Query: 1   MSFFNEESQETSTRKTDPLVRLLP-VGSSYVRTACVLASTGLLAPLLEETVFRGFVMASL 59
           +S F  E+ E   R+ D L++LLP +GSS + T  ++  TG+LAPLLEETVFRGF M SL
Sbjct: 89  LSVFRTEAPE---REVDSLMKLLPLIGSSNISTLSLVGITGILAPLLEETVFRGFFMVSL 145

Query: 60  TKWVPTPVAVLISAAVFSLCHFTPGVFPWLFVLGTFLGISYAQTRNLLTPITIHAFWNIG 119
           TKWVPTP+A++IS+A F+L HFTPG FP LF+LG+ LG+SYAQTRNL+TP+ IH FWN G
Sbjct: 146 TKWVPTPIAIIISSAAFALAHFTPGEFPQLFILGSVLGLSYAQTRNLITPMVIHGFWNSG 205

Query: 120 -LLVLTLLQ 127
            +L+LT LQ
Sbjct: 206 VILLLTFLQ 214


>AT1G14270.1 | Symbols:  | CAAX amino terminal protease family
           protein | chr1:4875099-4877195 REVERSE LENGTH=353
          Length = 353

 Score =  155 bits (392), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 79/129 (61%), Positives = 101/129 (78%), Gaps = 5/129 (3%)

Query: 1   MSFFNEESQETSTRKTDPLVRLLP-VGSSYVRTACVLASTGLLAPLLEETVFRGFVMASL 59
           +S F  E+ E   R+ D L++LLP +GSS + T  ++  TG+LAPLLEETVFRGF M SL
Sbjct: 215 LSVFRTEAPE---REVDSLMKLLPLIGSSNISTLSLVGITGILAPLLEETVFRGFFMVSL 271

Query: 60  TKWVPTPVAVLISAAVFSLCHFTPGVFPWLFVLGTFLGISYAQTRNLLTPITIHAFWNIG 119
           TKWVPTP+A++IS+A F+L HFTPG FP LF+LG+ LG+SYAQTRNL+TP+ IH FWN G
Sbjct: 272 TKWVPTPIAIIISSAAFALAHFTPGEFPQLFILGSVLGLSYAQTRNLITPMVIHGFWNSG 331

Query: 120 -LLVLTLLQ 127
            +L+LT LQ
Sbjct: 332 VILLLTFLQ 340


>AT5G60750.1 | Symbols:  | CAAX amino terminal protease family
           protein | chr5:24431072-24433199 FORWARD LENGTH=347
          Length = 347

 Score = 68.9 bits (167), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 57/88 (64%), Gaps = 1/88 (1%)

Query: 40  GLLAPLLEETVFRGFVMASLTKWVPTPVAVLISAAVFSLCHFTPGVFPWLFVLGTFLGIS 99
            + AP+ EE VFRGF++ SLT+++P   A+L+S+  F+L HF       L  LG  LG+ 
Sbjct: 261 SICAPVWEEIVFRGFLLPSLTRYMPVWCAILVSSIAFALAHFNVQRMLPLVFLGVVLGLI 320

Query: 100 YAQTRNLLTPITIHAFWNIGLLVLTLLQ 127
           +A++RNLL  + +H+ WN G + + L++
Sbjct: 321 FARSRNLLPSMLLHSLWN-GFVFMELMR 347


>AT2G20725.1 | Symbols:  | CAAX amino terminal protease family
           protein | chr2:8934113-8935426 REVERSE LENGTH=301
          Length = 301

 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 1/93 (1%)

Query: 25  VGSSYVRTACVLASTGLLAPLLEETVFRGFVMASLTKWVPTPVAVLISAAVFSLCHFTPG 84
           V     R+ C  A   ++AP+LEE V+R F++ SL   +    A++IS+ VF+  HF+  
Sbjct: 203 VSGEVARSGC-FALYCVVAPILEEIVYRRFLLTSLASRMEWWKALVISSGVFAAGHFSGE 261

Query: 85  VFPWLFVLGTFLGISYAQTRNLLTPITIHAFWN 117
            F  LF +G  LG+ Y+ + NL + + +H+ +N
Sbjct: 262 DFVQLFGIGCGLGLCYSWSGNLASSVLVHSLYN 294