Miyakogusa Predicted Gene
- Lj0g3v0304009.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0304009.1 tr|Q947K6|Q947K6_MEDSV CDK-activating kinase
OS=Medicago sativa subsp. varia GN=cak PE=2 SV=1,93.48,2e-16,Protein
kinase-like (PK-like),Protein kinase-like domain;
PROTEIN_KINASE_DOM,Protein kinase,
catalyt,NODE_81686_length_292_cov_23.414383.path1.1
(46 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G73690.1 | Symbols: CDKD1;1, AT;CDKD;1, CAK3AT | cyclin-depen... 71 1e-13
AT1G18040.1 | Symbols: CDKD1;3, AT;CDCKD;3, CAK2AT | cyclin-depe... 69 6e-13
AT1G66750.1 | Symbols: CDKD1;2, CAK4AT, AT;CDKD;2, CDKD;2, CAK4 ... 67 3e-12
AT3G14720.1 | Symbols: ATMPK19, MPK19 | MAP kinase 19 | chr3:494... 49 5e-07
AT3G48750.1 | Symbols: CDKA;1, CDC2AAT, CDK2, CDC2, CDC2A, CDKA1... 49 6e-07
AT3G18040.1 | Symbols: MPK9 | MAP kinase 9 | chr3:6174800-617815... 49 8e-07
AT1G73670.1 | Symbols: ATMPK15, MPK15 | MAP kinase 15 | chr1:277... 48 1e-06
AT1G53510.1 | Symbols: ATMPK18, MPK18 | mitogen-activated protei... 48 2e-06
AT1G18150.3 | Symbols: ATMPK8 | Protein kinase superfamily prote... 47 3e-06
AT1G18150.1 | Symbols: ATMPK8 | Protein kinase superfamily prote... 47 3e-06
AT1G18150.2 | Symbols: ATMPK8 | Protein kinase superfamily prote... 47 3e-06
AT2G42880.1 | Symbols: ATMPK20, MPK20 | MAP kinase 20 | chr2:178... 46 5e-06
>AT1G73690.1 | Symbols: CDKD1;1, AT;CDKD;1, CAK3AT |
cyclin-dependent kinase D1;1 | chr1:27715113-27717018
FORWARD LENGTH=398
Length = 398
Score = 70.9 bits (172), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/39 (84%), Positives = 37/39 (94%)
Query: 8 KKVADRYLKREVLGEGTYGVVYKAIDTQTGQTVAIKKIR 46
KKVADRYLKREVLG+GTYGVV+KA DT+ G+TVAIKKIR
Sbjct: 5 KKVADRYLKREVLGQGTYGVVFKATDTKNGETVAIKKIR 43
>AT1G18040.1 | Symbols: CDKD1;3, AT;CDCKD;3, CAK2AT |
cyclin-dependent kinase D1;3 | chr1:6207128-6209299
REVERSE LENGTH=391
Length = 391
Score = 68.9 bits (167), Expect = 6e-13, Method: Composition-based stats.
Identities = 33/39 (84%), Positives = 37/39 (94%)
Query: 8 KKVADRYLKREVLGEGTYGVVYKAIDTQTGQTVAIKKIR 46
KKVADRYLK+EVLG+GTYGVV+KA DT+T QTVAIKKIR
Sbjct: 6 KKVADRYLKQEVLGQGTYGVVFKATDTKTEQTVAIKKIR 44
>AT1G66750.1 | Symbols: CDKD1;2, CAK4AT, AT;CDKD;2, CDKD;2, CAK4 |
CDK-activating kinase 4 | chr1:24894775-24897015
FORWARD LENGTH=348
Length = 348
Score = 66.6 bits (161), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/45 (66%), Positives = 37/45 (82%), Gaps = 4/45 (8%)
Query: 2 AENDPSKKVADRYLKREVLGEGTYGVVYKAIDTQTGQTVAIKKIR 46
+N P DRYL+R++LGEGTYGVVYKA DT+TG+TVA+KKIR
Sbjct: 5 GDNQP----VDRYLRRQILGEGTYGVVYKATDTKTGKTVAVKKIR 45
>AT3G14720.1 | Symbols: ATMPK19, MPK19 | MAP kinase 19 |
chr3:4946057-4948906 FORWARD LENGTH=598
Length = 598
Score = 49.3 bits (116), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/35 (68%), Positives = 29/35 (82%)
Query: 11 ADRYLKREVLGEGTYGVVYKAIDTQTGQTVAIKKI 45
A+RY EV+G+G+YGVV AIDTQTG+ VAIKKI
Sbjct: 22 ANRYRILEVIGKGSYGVVCAAIDTQTGEKVAIKKI 56
>AT3G48750.1 | Symbols: CDKA;1, CDC2AAT, CDK2, CDC2, CDC2A, CDKA1
| cell division control 2 | chr3:18072238-18074296
FORWARD LENGTH=294
Length = 294
Score = 48.9 bits (115), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/35 (65%), Positives = 28/35 (80%)
Query: 12 DRYLKREVLGEGTYGVVYKAIDTQTGQTVAIKKIR 46
D+Y K E +GEGTYGVVYKA D T +T+A+KKIR
Sbjct: 2 DQYEKVEKIGEGTYGVVYKARDKVTNETIALKKIR 36
>AT3G18040.1 | Symbols: MPK9 | MAP kinase 9 | chr3:6174800-6178150
FORWARD LENGTH=510
Length = 510
Score = 48.9 bits (115), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 33/53 (62%), Gaps = 12/53 (22%)
Query: 5 DPSKKVA------------DRYLKREVLGEGTYGVVYKAIDTQTGQTVAIKKI 45
DP KKVA RY +EV+G+G+YGVV AIDT +G+ VAIKKI
Sbjct: 2 DPHKKVALETEFFTEYGEASRYQIQEVIGKGSYGVVASAIDTHSGEKVAIKKI 54
>AT1G73670.1 | Symbols: ATMPK15, MPK15 | MAP kinase 15 |
chr1:27700212-27703168 FORWARD LENGTH=576
Length = 576
Score = 47.8 bits (112), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/35 (65%), Positives = 29/35 (82%)
Query: 11 ADRYLKREVLGEGTYGVVYKAIDTQTGQTVAIKKI 45
A+RY +EV+G+G+YGVV AIDT TG+ VAIKKI
Sbjct: 87 ANRYQIQEVVGKGSYGVVGSAIDTHTGERVAIKKI 121
>AT1G53510.1 | Symbols: ATMPK18, MPK18 | mitogen-activated protein
kinase 18 | chr1:19970961-19974158 REVERSE LENGTH=615
Length = 615
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/35 (65%), Positives = 28/35 (80%)
Query: 11 ADRYLKREVLGEGTYGVVYKAIDTQTGQTVAIKKI 45
A+RY EV+G+G+YGVV AIDT TG+ VAIKKI
Sbjct: 22 ANRYRILEVIGKGSYGVVCAAIDTHTGEKVAIKKI 56
>AT1G18150.3 | Symbols: ATMPK8 | Protein kinase superfamily protein
| chr1:6244641-6247582 REVERSE LENGTH=589
Length = 589
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/35 (60%), Positives = 29/35 (82%)
Query: 11 ADRYLKREVLGEGTYGVVYKAIDTQTGQTVAIKKI 45
A+RY +EV+G+G+YGVV A+D+ TG+ VAIKKI
Sbjct: 101 ANRYQIQEVVGKGSYGVVASAVDSHTGERVAIKKI 135
>AT1G18150.1 | Symbols: ATMPK8 | Protein kinase superfamily protein
| chr1:6244641-6247582 REVERSE LENGTH=589
Length = 589
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/35 (60%), Positives = 29/35 (82%)
Query: 11 ADRYLKREVLGEGTYGVVYKAIDTQTGQTVAIKKI 45
A+RY +EV+G+G+YGVV A+D+ TG+ VAIKKI
Sbjct: 101 ANRYQIQEVVGKGSYGVVASAVDSHTGERVAIKKI 135
>AT1G18150.2 | Symbols: ATMPK8 | Protein kinase superfamily protein
| chr1:6244641-6247582 REVERSE LENGTH=589
Length = 589
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/35 (60%), Positives = 29/35 (82%)
Query: 11 ADRYLKREVLGEGTYGVVYKAIDTQTGQTVAIKKI 45
A+RY +EV+G+G+YGVV A+D+ TG+ VAIKKI
Sbjct: 101 ANRYQIQEVVGKGSYGVVASAVDSHTGERVAIKKI 135
>AT2G42880.1 | Symbols: ATMPK20, MPK20 | MAP kinase 20 |
chr2:17840572-17843947 REVERSE LENGTH=606
Length = 606
Score = 46.2 bits (108), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/35 (62%), Positives = 29/35 (82%)
Query: 11 ADRYLKREVLGEGTYGVVYKAIDTQTGQTVAIKKI 45
A+R+ +EV+G+G+YGVV AIDT TG+ VAIKKI
Sbjct: 22 ANRFKVQEVIGKGSYGVVCSAIDTLTGEKVAIKKI 56