Miyakogusa Predicted Gene
- Lj0g3v0303639.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0303639.1 Non Chatacterized Hit- tr|I1JX77|I1JX77_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,87.87,0,PPR:
pentatricopeptide repeat domain,Pentatricopeptide repeat;
PPR_2,Pentatricopeptide repeat; PPR,P,gene.g23638.t1.1
(569 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 791 0.0
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 553 e-157
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 503 e-142
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 493 e-139
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 457 e-128
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 444 e-125
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 444 e-124
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 439 e-123
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 437 e-122
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 436 e-122
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 433 e-121
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 432 e-121
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 432 e-121
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 432 e-121
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 430 e-120
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 430 e-120
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 427 e-120
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 426 e-119
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 426 e-119
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 425 e-119
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 423 e-118
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 421 e-118
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 421 e-118
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 419 e-117
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 417 e-117
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 415 e-116
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 414 e-116
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 412 e-115
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 412 e-115
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 411 e-115
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 411 e-115
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 410 e-114
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 405 e-113
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 405 e-113
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 404 e-113
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 404 e-113
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 402 e-112
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 402 e-112
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 402 e-112
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 400 e-111
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 399 e-111
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 399 e-111
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 399 e-111
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 398 e-111
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 396 e-110
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 395 e-110
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 394 e-110
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 392 e-109
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 390 e-108
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 389 e-108
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 388 e-108
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 387 e-107
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 385 e-107
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 384 e-107
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 383 e-106
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 383 e-106
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 383 e-106
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 383 e-106
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 382 e-106
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 382 e-106
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 379 e-105
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 377 e-104
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 374 e-103
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 372 e-103
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 372 e-103
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 372 e-103
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 371 e-103
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 367 e-101
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 366 e-101
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 365 e-101
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 364 e-101
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 363 e-100
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 362 e-100
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 358 5e-99
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 358 6e-99
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 355 6e-98
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 353 2e-97
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 349 2e-96
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 349 4e-96
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 339 3e-93
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 337 2e-92
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 336 3e-92
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 335 6e-92
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 332 4e-91
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 331 7e-91
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 330 2e-90
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 324 1e-88
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 321 8e-88
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 321 9e-88
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 318 7e-87
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 316 2e-86
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 315 5e-86
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 313 2e-85
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 312 3e-85
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 311 6e-85
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 308 5e-84
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 308 6e-84
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 307 1e-83
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 303 2e-82
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 303 2e-82
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 301 6e-82
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 301 7e-82
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 301 7e-82
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 301 1e-81
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 299 3e-81
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 297 1e-80
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 3e-79
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 293 3e-79
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 291 8e-79
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 290 3e-78
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 288 9e-78
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 1e-77
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 287 1e-77
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 2e-77
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 3e-77
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 4e-77
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 7e-77
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 1e-76
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 1e-76
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 2e-76
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 2e-76
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 2e-76
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 280 3e-75
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 279 3e-75
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 279 4e-75
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 279 4e-75
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 279 5e-75
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 8e-75
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 278 1e-74
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 276 2e-74
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 3e-74
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 5e-74
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 6e-74
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 8e-74
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 1e-73
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 274 2e-73
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 2e-73
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 6e-73
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 1e-72
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 270 3e-72
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 9e-72
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 268 1e-71
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 267 1e-71
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 1e-71
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 266 2e-71
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 3e-71
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 6e-71
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 6e-71
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 3e-70
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 7e-70
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 8e-70
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 9e-70
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 9e-70
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 261 1e-69
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 3e-69
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 4e-69
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 5e-69
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 1e-68
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 2e-68
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 2e-68
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 2e-68
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 252 6e-67
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 4e-66
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 5e-66
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 248 7e-66
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 9e-66
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 247 1e-65
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 2e-65
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 2e-65
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 2e-65
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 243 4e-64
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 241 7e-64
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 2e-63
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 5e-63
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 7e-63
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 237 2e-62
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 2e-61
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 5e-61
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 5e-61
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 1e-60
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 5e-60
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 7e-60
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 7e-60
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 9e-60
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 1e-59
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 227 1e-59
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 2e-59
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 4e-59
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 225 6e-59
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 9e-59
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 1e-58
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 2e-57
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 220 3e-57
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 1e-56
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 2e-56
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 4e-55
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 212 6e-55
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 203 2e-52
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 6e-52
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 185 6e-47
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 1e-45
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 168 9e-42
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 2e-41
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 2e-38
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 3e-36
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 132 6e-31
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 3e-29
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 8e-29
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 125 1e-28
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 122 7e-28
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 7e-28
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 9e-28
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 1e-27
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 121 1e-27
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 121 1e-27
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 6e-27
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 7e-27
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 7e-26
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 5e-25
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 112 8e-25
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 111 1e-24
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 5e-24
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 6e-24
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 7e-24
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 1e-23
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 1e-23
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 1e-22
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 104 1e-22
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 104 2e-22
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 103 3e-22
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 6e-22
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 9e-22
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 100 3e-21
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 100 3e-21
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 4e-21
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 5e-21
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 6e-21
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 7e-21
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 9e-21
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 2e-20
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 2e-20
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 2e-20
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 3e-20
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 6e-20
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 8e-20
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 8e-20
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 1e-19
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 1e-19
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 3e-19
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 4e-19
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 5e-19
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 5e-19
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 6e-19
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 1e-18
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 91 2e-18
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 5e-18
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 5e-18
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 7e-18
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 8e-18
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 9e-18
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 89 1e-17
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 2e-17
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 3e-17
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 5e-17
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 5e-17
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 5e-17
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 6e-16
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 6e-16
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 82 7e-16
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 82 7e-16
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 8e-16
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 79 8e-15
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 9e-15
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 1e-14
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 79 1e-14
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 2e-14
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 4e-14
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 8e-14
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 7e-13
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 70 3e-12
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 70 3e-12
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 69 8e-12
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 4e-11
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 67 4e-11
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 65 1e-10
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 65 2e-10
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 63 7e-10
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 62 9e-10
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 62 1e-09
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 61 2e-09
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 61 2e-09
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 59 7e-09
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 59 7e-09
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 5e-08
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 55 1e-07
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 55 1e-07
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 6e-07
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 52 1e-06
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 51 2e-06
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 791 bits (2043), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/570 (64%), Positives = 456/570 (80%), Gaps = 1/570 (0%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAF 60
M+ K+T+TWNS+L +K +A QLF++IPEP+T SYNIML+C++ + A++F
Sbjct: 87 MRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSF 146
Query: 61 FDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAV 120
FDRM KD ASWNTMI+GYA+ G M +A LF M EKN VSW+AM+SGY+ CGDL+ A
Sbjct: 147 FDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKAS 206
Query: 121 ECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSL-KTLVTWNAMIAGYVENGRAE 179
F APVR V+ WTAMITGYMK +VE AE +F++M++ K LVTWNAMI+GYVEN R E
Sbjct: 207 HFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPE 266
Query: 180 DGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLI 239
DGLKLF++MLE G +PN+ L+S LLGCS LSALQLG+Q+HQ+V KS L +D TA TSLI
Sbjct: 267 DGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLI 326
Query: 240 SMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWI 299
SMY KCG+L +AW+LF + +KD+V+WNAMISGYAQHG +KAL LF EM + ++PDWI
Sbjct: 327 SMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWI 386
Query: 300 TFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKS 359
TFVAVLLACNHAGLV++G+ YF MVRD+ ++ +P+HY CMVDLLGRAG+L EA+ LI+S
Sbjct: 387 TFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRS 446
Query: 360 MPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHV 419
MPF+PH A+FGTLLGACR+HKN++LAEFAA+ LL+L+ +A GYVQLAN+YA++NRWE V
Sbjct: 447 MPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDV 506
Query: 420 ARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIHXXXXXXXXXXXXAGYV 479
AR+R+ MKE+ VVK PGYSWIEI ++VH FRSSDR+HPEL SIH AGY
Sbjct: 507 ARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYK 566
Query: 480 PDLEFALHDVGEELKEQLLLWHSEKLAIAYGLLKVPLGLPIRVFKNLRVCGDCHTAIKYI 539
P+LEFALH+V EE KE+LLLWHSEKLA+A+G +K+P G I+VFKNLR+CGDCH AIK+I
Sbjct: 567 PELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFI 626
Query: 540 SAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
S IE REIIVRDTTRFHHFKDG CSC DYW
Sbjct: 627 SEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 133/315 (42%), Gaps = 43/315 (13%)
Query: 104 SAMVSGYVACGDLDAAVECFYAAPVRSVITWTAMITG----------------------- 140
+ +++ V GD+D A+ F+ ++ ITW +++ G
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDT 124
Query: 141 ---------YMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLES 191
Y++ E A+ F M K +WN MI GY G E +LF SM+E
Sbjct: 125 FSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEK 184
Query: 192 GAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEA 251
N +S +++ G L+ ++ +P+ A T++I+ Y K ++ A
Sbjct: 185 ----NEVSWNAMISGYIECGDLEKASHFFKV---APVRG-VVAWTAMITGYMKAKKVELA 236
Query: 252 WELFVQIP-RKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNH 310
+F + K++V+WNAMISGY ++ E L LF M +G++P+ + LL C+
Sbjct: 237 EAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSE 296
Query: 311 AGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFG 370
+ LG Q + +V + ++ + + G L +A L + M K +
Sbjct: 297 LSALQLGRQ-IHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMK-KKDVVAWN 354
Query: 371 TLLGACRIHKNLDLA 385
++ H N D A
Sbjct: 355 AMISGYAQHGNADKA 369
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 553 bits (1426), Expect = e-157, Method: Compositional matrix adjust.
Identities = 267/563 (47%), Positives = 363/563 (64%), Gaps = 1/563 (0%)
Query: 7 VTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEV 66
V+WN +L F KK E ARQ F+ + + VS+N ++ + + AR FD V
Sbjct: 220 VSWNCLLGGFVKKKKIVE-ARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPV 278
Query: 67 KDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYAA 126
+D +W M+SGY Q ++ EA LF MPE+N VSW+AM++GYV ++ A E F
Sbjct: 279 QDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVM 338
Query: 127 PVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFK 186
P R+V TW MITGY + G++ A+ LF +M + V+W AMIAGY ++G + + L+LF
Sbjct: 339 PCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFV 398
Query: 187 SMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCG 246
M G + N S +S L C+++ AL+LGKQ+H + K + G +L+ MY KCG
Sbjct: 399 QMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCG 458
Query: 247 DLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLL 306
++EA +LF ++ KDIVSWN MI+GY++HG GE AL F+ M+ +G+KPD T VAVL
Sbjct: 459 SIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLS 518
Query: 307 ACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHP 366
AC+H GLVD G QYF M +D+G+ +HYACMVDLLGRAG L +A +L+K+MPF+P
Sbjct: 519 ACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDA 578
Query: 367 AIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSM 426
AI+GTLLGA R+H N +LAE AA + ++P ++ YV L+N+YA+ RW V ++R M
Sbjct: 579 AIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRM 638
Query: 427 KENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIHXXXXXXXXXXXXAGYVPDLEFAL 486
++ V K PGYSWIEI ++ H F D HPE I AGYV L
Sbjct: 639 RDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVL 698
Query: 487 HDVGEELKEQLLLWHSEKLAIAYGLLKVPLGLPIRVFKNLRVCGDCHTAIKYISAIEGRE 546
HDV EE KE+++ +HSE+LA+AYG+++V G PIRV KNLRVC DCH AIKY++ I GR
Sbjct: 699 HDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRL 758
Query: 547 IIVRDTTRFHHFKDGFCSCSDYW 569
II+RD RFHHFKDG CSC DYW
Sbjct: 759 IILRDNNRFHHFKDGSCSCGDYW 781
Score = 218 bits (556), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 127/390 (32%), Positives = 216/390 (55%), Gaps = 41/390 (10%)
Query: 5 STVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRM 64
S+V++N ++S + + +G FE AR+LF+++PE + VS+N+M+ ++ + +G AR F+ M
Sbjct: 94 SSVSYNGMISGYLR-NGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIM 152
Query: 65 EVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAV---- 120
+D SWNTM+SGYAQ G + +A +F MPEKN VSW+A++S YV ++ A
Sbjct: 153 PERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFK 212
Query: 121 ---------------------------ECFYAAPVRSVITWTAMITGYMKFGRVESAERL 153
+ F + VR V++W +ITGY + G+++ A +L
Sbjct: 213 SRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQL 272
Query: 154 FREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSAL 213
F E ++ + TW AM++GY++N E+ +LF M E N +S ++L G +
Sbjct: 273 FDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERM 328
Query: 214 QLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGY 273
++ K++ ++ P + +T T +I+ YA+CG + EA LF ++P++D VSW AMI+GY
Sbjct: 329 EMAKELFDVM---PCRNVSTWNT-MITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGY 384
Query: 274 AQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTK 333
+Q G +AL LF +M +G + + +F + L C ++LG Q +V+ G +T
Sbjct: 385 SQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKG-GYETG 443
Query: 334 PEHYACMVDLLGRAGRLPEAVDLIKSMPFK 363
++ + + G + EA DL K M K
Sbjct: 444 CFVGNALLLMYCKCGSIEEANDLFKEMAGK 473
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 172/345 (49%), Gaps = 20/345 (5%)
Query: 32 KIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASML 91
K + + +N+ ++ ++ A F RM + S+N MISGY + G A L
Sbjct: 58 KCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKL 117
Query: 92 FAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAE 151
F MPE++ VSW+ M+ GYV +L A E F P R V +W M++GY + G V+ A
Sbjct: 118 FDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDAR 177
Query: 152 RLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLS 211
+F M K V+WNA+++ YV+N + E+ LFKS E+ A +S +L G
Sbjct: 178 SVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSR-ENWA---LVSWNCLLGGFVKKK 233
Query: 212 ALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMIS 271
+ +Q S D + ++I+ YA+ G + EA +LF + P +D+ +W AM+S
Sbjct: 234 KIVEARQFFD----SMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVS 289
Query: 272 GYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMM-VRDFGI 330
GY Q+ E+A LFD+M + + +++ A+L +++ + F++M R+
Sbjct: 290 GYIQNRMVEEARELFDKM----PERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVST 345
Query: 331 KTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGA 375
+ M+ + G++ EA +L MP K P + ++
Sbjct: 346 ------WNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAG 383
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 503 bits (1296), Expect = e-142, Method: Compositional matrix adjust.
Identities = 253/571 (44%), Positives = 355/571 (62%), Gaps = 3/571 (0%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAF 60
M K+ V+W +L F + G + A +L+E IP+ + ++ M+ V AR
Sbjct: 136 MPEKNKVSWTVMLIGFLQD-GRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREI 194
Query: 61 FDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAV 120
FD M + +W TM++GY Q + +A +F VMPEK VSW++M+ GYV G ++ A
Sbjct: 195 FDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAE 254
Query: 121 ECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAED 180
E F PV+ VI AMI+G + G + A R+F M + +W +I + NG +
Sbjct: 255 ELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELE 314
Query: 181 GLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLIS 240
L LF M + G +P +L S+L C++L++L GKQVH + + D + L++
Sbjct: 315 ALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMT 374
Query: 241 MYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDG-MKPDWI 299
MY KCG+L ++ +F + P KDI+ WN++ISGYA HG GE+AL +F EM G KP+ +
Sbjct: 375 MYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEV 434
Query: 300 TFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKS 359
TFVA L AC++AG+V+ G++ + M FG+K HYACMVD+LGRAGR EA+++I S
Sbjct: 435 TFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDS 494
Query: 360 MPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHV 419
M +P A++G+LLGACR H LD+AEF AK L+E++P ++ Y+ L+N+YA+Q RW V
Sbjct: 495 MTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADV 554
Query: 420 ARIRRSMKENKVVKAPGYSWIEISSEVHEF-RSSDRLHPELASIHXXXXXXXXXXXXAGY 478
A +R+ MK V K+PG SW E+ ++VH F R HPE SI AGY
Sbjct: 555 AELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGY 614
Query: 479 VPDLEFALHDVGEELKEQLLLWHSEKLAIAYGLLKVPLGLPIRVFKNLRVCGDCHTAIKY 538
PD +ALHDV EE K L +HSE+LA+AY LLK+ G+PIRV KNLRVC DCHTAIK
Sbjct: 615 NPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKI 674
Query: 539 ISAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
IS ++ REII+RD RFHHF++G CSC DYW
Sbjct: 675 ISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 176/325 (54%), Gaps = 13/325 (4%)
Query: 4 KSTVTWNSILSAFAKKHGNF--EQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFF 61
KS +WNS+++ + N AR+LF+++P+ N +S+N +++ ++ + + AR F
Sbjct: 46 KSISSWNSMVAGY---FANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVF 102
Query: 62 DRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVE 121
D M ++ SW ++ GY G + A LF MPEKN VSW+ M+ G++ G +D A +
Sbjct: 103 DLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACK 162
Query: 122 CFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDG 181
+ P + I T+MI G K GRV+ A +F EMS ++++TW M+ GY +N R +D
Sbjct: 163 LYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDA 222
Query: 182 LKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISM 241
K+F M E +S TS+L+G ++ +++ +++ P+ A ++IS
Sbjct: 223 RKIFDVMPEK----TEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPV----IACNAMISG 274
Query: 242 YAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITF 301
+ G++ +A +F + ++ SW +I + ++G +AL LF M+ G++P + T
Sbjct: 275 LGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTL 334
Query: 302 VAVLLACNHAGLVDLGVQYFNMMVR 326
+++L C + G Q +VR
Sbjct: 335 ISILSVCASLASLHHGKQVHAQLVR 359
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 148/290 (51%), Gaps = 21/290 (7%)
Query: 73 NTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPVRSVI 132
N I+ +++G + EA LF K+ SW++MV+GY A A + F P R++I
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNII 80
Query: 133 TWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESG 192
+W +++GYMK G ++ A ++F M + +V+W A++ GYV NG+ + LF M E
Sbjct: 81 SWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEK- 139
Query: 193 AKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAW 252
N +S T +L+G + ++++++ D A TS+I K G + EA
Sbjct: 140 ---NKVSWTVMLIGFLQDGRIDDACKLYEMI----PDKDNIARTSMIHGLCKEGRVDEAR 192
Query: 253 ELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAG 312
E+F ++ + +++W M++GY Q+ + A +FD M + +++ ++L+ G
Sbjct: 193 EIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMP----EKTEVSWTSMLMGYVQNG 248
Query: 313 LVDLGVQYFNMMVRDFGIKTKPEHYAC--MVDLLGRAGRLPEAVDLIKSM 360
++ + F +M KP AC M+ LG+ G + +A + SM
Sbjct: 249 RIEDAEELFEVM------PVKPV-IACNAMISGLGQKGEIAKARRVFDSM 291
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 106/242 (43%), Gaps = 17/242 (7%)
Query: 133 TWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESG 192
T IT + G++ A +LF K++ +WN+M+AGY N D KLF M +
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDR- 77
Query: 193 AKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAW 252
N +S ++ G + ++V L+ + + + T+L+ Y G + A
Sbjct: 78 ---NIISWNGLVSGYMKNGEIDEARKVFDLMPE----RNVVSWTALVKGYVHNGKVDVAE 130
Query: 253 ELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAG 312
LF ++P K+ VSW M+ G+ Q G + A L+ EM D D I +++ G
Sbjct: 131 SLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLY-EMIPD---KDNIARTSMIHGLCKEG 186
Query: 313 LVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTL 372
VD + F+ M I + MV G+ R+ +A + MP K + L
Sbjct: 187 RVDEAREIFDEMSERSVIT-----WTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSML 241
Query: 373 LG 374
+G
Sbjct: 242 MG 243
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 493 bits (1268), Expect = e-139, Method: Compositional matrix adjust.
Identities = 246/570 (43%), Positives = 344/570 (60%), Gaps = 2/570 (0%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAF 60
M ++ V+W + G ++AR+L++ +P + V+ M+ V AR
Sbjct: 136 MPERNEVSWTVMFGGLID-DGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLI 194
Query: 61 FDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAV 120
FD M ++ +W TMI+GY Q + A LF VMPEK VSW++M+ GY G ++ A
Sbjct: 195 FDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAE 254
Query: 121 ECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAED 180
E F P++ VI AMI G+ + G + A R+F M + TW MI Y G +
Sbjct: 255 EFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELE 314
Query: 181 GLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLIS 240
L LF M + G +P+ SL S+L C+ L++LQ G+QVH + + D + L++
Sbjct: 315 ALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMT 374
Query: 241 MYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWIT 300
MY KCG+L +A +F + KDI+ WN++ISGYA HG GE+AL +F EM G P+ +T
Sbjct: 375 MYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVT 434
Query: 301 FVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSM 360
+A+L AC++AG ++ G++ F M F + EHY+C VD+LGRAG++ +A++LI+SM
Sbjct: 435 LIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESM 494
Query: 361 PFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVA 420
KP ++G LLGAC+ H LDLAE AAK L E +P +A YV L+++ A++++W VA
Sbjct: 495 TIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVA 554
Query: 421 RIRRSMKENKVVKAPGYSWIEISSEVHEF-RSSDRLHPELASIHXXXXXXXXXXXXAGYV 479
+R++M+ N V K PG SWIE+ +VH F R + HPE A I AGY
Sbjct: 555 VVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYS 614
Query: 480 PDLEFALHDVGEELKEQLLLWHSEKLAIAYGLLKVPLGLPIRVFKNLRVCGDCHTAIKYI 539
PD LHDV EE K L HSE+LA+AYGLLK+P G+PIRV KNLRVCGDCH AIK I
Sbjct: 615 PDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLI 674
Query: 540 SAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
S + REII+RD RFHHF +G CSC DYW
Sbjct: 675 SKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 188 bits (478), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 181/326 (55%), Gaps = 9/326 (2%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAF 60
++ K+ +WNSI+S + +G ++ARQLF+++ E N VS+N +++ ++ + + AR
Sbjct: 43 LQFKAIGSWNSIVSGYFS-NGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNV 101
Query: 61 FDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAV 120
F+ M ++ SW M+ GY Q G++GEA LF MPE+N VSW+ M G + G +D A
Sbjct: 102 FELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKAR 161
Query: 121 ECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAED 180
+ + PV+ V+ T MI G + GRV+ A +F EM + +VTW MI GY +N R +
Sbjct: 162 KLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDV 221
Query: 181 GLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLIS 240
KLF+ M E +S TS+LLG + ++ ++ +++ P+ A ++I
Sbjct: 222 ARKLFEVMPEK----TEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPV----IACNAMIV 273
Query: 241 MYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWIT 300
+ + G++ +A +F + +D +W MI Y + G +AL LF +M+ G++P + +
Sbjct: 274 GFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPS 333
Query: 301 FVAVLLACNHAGLVDLGVQYFNMMVR 326
+++L C + G Q +VR
Sbjct: 334 LISILSVCATLASLQYGRQVHAHLVR 359
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 155/327 (47%), Gaps = 22/327 (6%)
Query: 54 VGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVAC 113
+ AR FFD ++ K SWN+++SGY GL EA LF M E+N VSW+ +VSGY+
Sbjct: 33 INEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKN 92
Query: 114 GDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYV 173
+ A F P R+V++WTAM+ GYM+ G V AE LF M + V+W M G +
Sbjct: 93 RMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLI 152
Query: 174 ENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTT 233
++GR + KL+ M + ++ T+++ G + + L+ +
Sbjct: 153 DDGRIDKARKLYDMM----PVKDVVASTNMIGGLCREGRVDEAR----LIFDEMRERNVV 204
Query: 234 AGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDG 293
T++I+ Y + + A +LF +P K VSW +M+ GY G E A F+ M
Sbjct: 205 TWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVM---P 261
Query: 294 MKPDWITFVAVLLACNHAGLVDLGVQYFNMMV-RDFGIKTKPEHYACMVDLLGRAGRLPE 352
MKP I A+++ G + + F++M RD + M+ R G E
Sbjct: 262 MKP-VIACNAMIVGFGEVGEISKARRVFDLMEDRDNAT------WRGMIKAYERKGFELE 314
Query: 353 AVDLIKSMP---FKPHPAIFGTLLGAC 376
A+DL M +P ++L C
Sbjct: 315 ALDLFAQMQKQGVRPSFPSLISILSVC 341
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 129/249 (51%), Gaps = 12/249 (4%)
Query: 76 ISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPVRSVITWT 135
IS +++G + EA F + K SW+++VSGY + G A + F R+V++W
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWN 83
Query: 136 AMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKP 195
+++GY+K + A +F M + +V+W AM+ GY++ G + LF M E
Sbjct: 84 GLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPER---- 139
Query: 196 NALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELF 255
N +S T + G + + ++++ ++ P+ D A T++I + G + EA +F
Sbjct: 140 NEVSWTVMFGGLIDDGRIDKARKLYDMM---PV-KDVVASTNMIGGLCREGRVDEARLIF 195
Query: 256 VQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVD 315
++ +++V+W MI+GY Q+ + A LF+ M + +++ ++LL +G ++
Sbjct: 196 DEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMP----EKTEVSWTSMLLGYTLSGRIE 251
Query: 316 LGVQYFNMM 324
++F +M
Sbjct: 252 DAEEFFEVM 260
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 132/276 (47%), Gaps = 21/276 (7%)
Query: 101 VSWSAMVSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLK 160
V+ S +S G ++ A + F + +++ +W ++++GY G + A +LF EMS +
Sbjct: 18 VNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSER 77
Query: 161 TLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLG--KQ 218
+V+WN +++GY++N + +F+ M E N +S T+++ G +Q G +
Sbjct: 78 NVVSWNGLVSGYIKNRMIVEARNVFELMPER----NVVSWTAMVKG-----YMQEGMVGE 128
Query: 219 VHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGA 278
L + P + + T + G + +A +L+ +P KD+V+ MI G + G
Sbjct: 129 AESLFWRMP-ERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGR 187
Query: 279 GEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYA 338
++A +FDEMR + +T+ ++ VD+ + F +M + +
Sbjct: 188 VDEARLIFDEMRERNV----VTWTTMITGYRQNNRVDVARKLFEVMPEKTEVS-----WT 238
Query: 339 CMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLG 374
M+ +GR+ +A + + MP KP A ++G
Sbjct: 239 SMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVG 274
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 457 bits (1176), Expect = e-128, Method: Compositional matrix adjust.
Identities = 250/603 (41%), Positives = 352/603 (58%), Gaps = 44/603 (7%)
Query: 10 NSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDT 69
NS+L+ +AK G+ A+ +F+++ + S+N M+A H+ + A A F++M +D
Sbjct: 185 NSLLNMYAK-CGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI 243
Query: 70 ASWNTMISGYAQVGLMGEASMLFAVMP----------------------EKNCVS----- 102
+WN+MISG+ Q G A +F+ M EK C+
Sbjct: 244 VTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHS 303
Query: 103 -------------WSAMVSGYVACGDLDAAVECFYAAPVRS--VITWTAMITGYMKFGRV 147
+A++S Y CG ++ A + + +TA++ GY+K G +
Sbjct: 304 HIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDM 363
Query: 148 ESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGC 207
A+ +F + + +V W AMI GY ++G + + LF+SM+ G +PN+ +L ++L
Sbjct: 364 NQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVA 423
Query: 208 SNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIP-RKDIVSW 266
S+L++L GKQ+H KS + +LI+MYAK G++ A F I +D VSW
Sbjct: 424 SSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSW 483
Query: 267 NAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVR 326
+MI AQHG E+AL LF+ M +G++PD IT+V V AC HAGLV+ G QYF+MM
Sbjct: 484 TSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKD 543
Query: 327 DFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAE 386
I HYACMVDL GRAG L EA + I+ MP +P +G+LL ACR+HKN+DL +
Sbjct: 544 VDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGK 603
Query: 387 FAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEV 446
AA+ LL L+P ++ Y LAN+Y+A +WE A+IR+SMK+ +V K G+SWIE+ +V
Sbjct: 604 VAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKV 663
Query: 447 HEFRSSDRLHPELASIHXXXXXXXXXXXXAGYVPDLEFALHDVGEELKEQLLLWHSEKLA 506
H F D HPE I+ GYVPD LHD+ EE+KEQ+L HSEKLA
Sbjct: 664 HVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLA 723
Query: 507 IAYGLLKVPLGLPIRVFKNLRVCGDCHTAIKYISAIEGREIIVRDTTRFHHFKDGFCSCS 566
IA+GL+ P +R+ KNLRVC DCHTAIK+IS + GREIIVRDTTRFHHFKDGFCSC
Sbjct: 724 IAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCR 783
Query: 567 DYW 569
DYW
Sbjct: 784 DYW 786
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 163/392 (41%), Gaps = 97/392 (24%)
Query: 73 NTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPVRSVI 132
N +++ Y++ G A LF MP + SW+ ++S Y GD+D+ E F P R +
Sbjct: 53 NNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSV 112
Query: 133 TWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESG 192
+WT MI GY G+ A +++ M++ G
Sbjct: 113 SWTTMIVGYKNIGQYHKA-------------------------------IRVMGDMVKEG 141
Query: 193 AKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGD----- 247
+P +LT+VL + ++ GK+VH + K L + + SL++MYAKCGD
Sbjct: 142 IEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAK 201
Query: 248 --------------------------LKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEK 281
+ A F Q+ +DIV+WN+MISG+ Q G +
Sbjct: 202 FVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLR 261
Query: 282 ALHLFDEMRHDG-MKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACM 340
AL +F +M D + PD T +VL AC + + +G Q + +V G +
Sbjct: 262 ALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTT-GFDISGIVLNAL 320
Query: 341 VDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSA 400
+ + R G + A LI+ R K+L + F A LL+
Sbjct: 321 ISMYSRCGGVETARRLIEQ-----------------RGTKDLKIEGFTA--LLD------ 355
Query: 401 TGYVQLANVYAAQNRWEHVARIRRSMKENKVV 432
GY++L ++ A+N I S+K+ VV
Sbjct: 356 -GYIKLGDMNQAKN-------IFVSLKDRDVV 379
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 138/352 (39%), Gaps = 104/352 (29%)
Query: 57 ARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDL 116
AR FD M ++ SWNT++S Y++ G M F +P+++ VSW+ M+ GY G
Sbjct: 68 ARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQY 127
Query: 117 DAAVECF--------------YAAPVRSVITWTAMITG---------------------- 140
A+ + SV M TG
Sbjct: 128 HKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSL 187
Query: 141 ---YMKFGRVESAERLFREMSLKTLVTWNAMIA--------------------------- 170
Y K G A+ +F M ++ + +WNAMIA
Sbjct: 188 LNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWN 247
Query: 171 ----GYVENGRAEDGLKLFKSML-ESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCK 225
G+ + G L +F ML +S P+ +L SVL C+NL L +GKQ+H +
Sbjct: 248 SMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVT 307
Query: 226 SPLSSDTTAGTSLISMYAKC---------------------------------GDLKEAW 252
+ +LISMY++C GD+ +A
Sbjct: 308 TGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAK 367
Query: 253 ELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAV 304
+FV + +D+V+W AMI GY QHG+ +A++LF M G +P+ T A+
Sbjct: 368 NIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAM 419
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 68/141 (48%), Gaps = 12/141 (8%)
Query: 195 PNALSLTSVLLGCSNLSALQLGKQ--------VHQLVCKSPLSSDTTAGTSLISMYAKCG 246
P LSL+++L C+NL + K VH V KS L +L+++Y+K G
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 247 DLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLL 306
A +LF ++P + SWN ++S Y++ G + FD++ + D +++ +++
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLP----QRDSVSWTTMIV 119
Query: 307 ACNHAGLVDLGVQYFNMMVRD 327
+ G ++ MV++
Sbjct: 120 GYKNIGQYHKAIRVMGDMVKE 140
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 444 bits (1143), Expect = e-125, Method: Compositional matrix adjust.
Identities = 227/585 (38%), Positives = 347/585 (59%), Gaps = 34/585 (5%)
Query: 8 TWNSILSAFAK--KHGNFEQARQLFEKIPE--PNTVSYNIMLACHLHHFGVGSARAFFDR 63
T N++++ +AK G+ +F+++P+ N+ ++ + FG+ S R F+
Sbjct: 142 TGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEV 201
Query: 64 MEVKDTASWNTMISGYAQVGL----------MGEASM------LFAVMP---EKNCVSWS 104
M KD S+NT+I+GYAQ G+ MG + L +V+P E V
Sbjct: 202 MPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKG 261
Query: 105 AMVSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVT 164
+ GYV +D+ V ++++ Y K R+E +ER+F + + ++
Sbjct: 262 KEIHGYVIRKGIDS-----------DVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGIS 310
Query: 165 WNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVC 224
WN+++AGYV+NGR + L+LF+ M+ + KP A++ +SV+ C++L+ L LGKQ+H V
Sbjct: 311 WNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVL 370
Query: 225 KSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALH 284
+ S+ ++L+ MY+KCG++K A ++F ++ D VSW A+I G+A HG G +A+
Sbjct: 371 RGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVS 430
Query: 285 LFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLL 344
LF+EM+ G+KP+ + FVAVL AC+H GLVD YFN M + +G+ + EHYA + DLL
Sbjct: 431 LFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLL 490
Query: 345 GRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYV 404
GRAG+L EA + I M +P +++ TLL +C +HKNL+LAE A+ + +D + YV
Sbjct: 491 GRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYV 550
Query: 405 QLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIHX 464
+ N+YA+ RW+ +A++R M++ + K P SWIE+ ++ H F S DR HP + I+
Sbjct: 551 LMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINE 610
Query: 465 XXXXXXXXXXXAGYVPDLEFALHDVGEELKEQLLLWHSEKLAIAYGLLKVPLGLPIRVFK 524
GYV D LHDV EE K +LL HSE+LA+A+G++ G IRV K
Sbjct: 611 FLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTK 670
Query: 525 NLRVCGDCHTAIKYISAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
N+R+C DCH AIK+IS I REIIVRD +RFHHF G CSC DYW
Sbjct: 671 NIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 101/236 (42%), Gaps = 37/236 (15%)
Query: 154 FREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSAL 213
F+ + ++ W ++I + + L F M SG P+ SVL C+ + L
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 214 QLGKQVHQLVCKSPLSSDTTAGTSLISMYAK-----------------------CGD--- 247
+ G+ VH + + + D G +L++MYAK GD
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 248 ----------LKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPD 297
+ +F +PRKD+VS+N +I+GYAQ G E AL + EM +KPD
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241
Query: 298 WITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEA 353
T +VL + V G + ++R GI + + +VD+ ++ R+ ++
Sbjct: 242 SFTLSSVLPIFSEYVDVIKGKEIHGYVIRK-GIDSDVYIGSSLVDMYAKSARIEDS 296
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 444 bits (1141), Expect = e-124, Method: Compositional matrix adjust.
Identities = 239/622 (38%), Positives = 344/622 (55%), Gaps = 76/622 (12%)
Query: 24 EQARQLFEKIPEPNTVSYNIMLACHL-HHFGVGSARAFFDR------------------- 63
E AR++F+++PE +T+ +N M++ + + V S + F D
Sbjct: 171 EDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPA 230
Query: 64 ----------MEVKDTAS----------WNTMISGYAQVGLMGEASMLFAVMPEKNCVSW 103
M++ A+ IS Y++ G + S LF + + V++
Sbjct: 231 VAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAY 290
Query: 104 SAMVSGYVACGDLDAAVECF-----YAAPVRSVI-------------------------- 132
+AM+ GY + G+ + ++ F A +RS
Sbjct: 291 NAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNF 350
Query: 133 -----TWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKS 187
TA+ T Y K +ESA +LF E K+L +WNAMI+GY +NG ED + LF+
Sbjct: 351 LSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFRE 410
Query: 188 MLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGD 247
M +S PN +++T +L C+ L AL LGK VH LV + S T+LI MYAKCG
Sbjct: 411 MQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGS 470
Query: 248 LKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLA 307
+ EA LF + +K+ V+WN MISGY HG G++AL++F EM + G+ P +TF+ VL A
Sbjct: 471 IAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYA 530
Query: 308 CNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPA 367
C+HAGLV G + FN M+ +G + +HYACMVD+LGRAG L A+ I++M +P +
Sbjct: 531 CSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSS 590
Query: 368 IFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMK 427
++ TLLGACRIHK+ +LA ++ L ELDP + +V L+N+++A + A +R++ K
Sbjct: 591 VWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAK 650
Query: 428 ENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIHXXXXXXXXXXXXAGYVPDLEFALH 487
+ K+ KAPGY+ IEI H F S D+ HP++ I+ AGY P+ E ALH
Sbjct: 651 KRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALH 710
Query: 488 DVGEELKEQLLLWHSEKLAIAYGLLKVPLGLPIRVFKNLRVCGDCHTAIKYISAIEGREI 547
DV EE +E ++ HSE+LAIA+GL+ G IR+ KNLRVC DCHT K IS I R I
Sbjct: 711 DVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVI 770
Query: 548 IVRDTTRFHHFKDGFCSCSDYW 569
+VRD RFHHFKDG CSC DYW
Sbjct: 771 VVRDANRFHHFKDGVCSCGDYW 792
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 167/338 (49%), Gaps = 20/338 (5%)
Query: 54 VGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNC--VSWSAMVSGYV 111
V AR FDRM KDT WNTMISGY + + E+ +F + ++C + + ++
Sbjct: 170 VEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILP 229
Query: 112 ACGDLDAAVECFYAAPVRSVIT----------WTAMITGYMKFGRVESAERLFREMSLKT 161
A +L E + S+ T T I+ Y K G+++ LFRE
Sbjct: 230 AVAELQ---ELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPD 286
Query: 162 LVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQ 221
+V +NAMI GY NG E L LFK ++ SGA+ + +L S++ + L L +H
Sbjct: 287 IVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGH---LMLIYAIHG 343
Query: 222 LVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEK 281
KS S + T+L ++Y+K +++ A +LF + P K + SWNAMISGY Q+G E
Sbjct: 344 YCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTED 403
Query: 282 ALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMV 341
A+ LF EM+ P+ +T +L AC G + LG ++ + +VR ++ ++
Sbjct: 404 AISLFREMQKSEFSPNPVTITCILSACAQLGALSLG-KWVHDLVRSTDFESSIYVSTALI 462
Query: 342 DLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIH 379
+ + G + EA L M K + + T++ +H
Sbjct: 463 GMYAKCGSIAEARRLFDLMT-KKNEVTWNTMISGYGLH 499
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 98/179 (54%), Gaps = 1/179 (0%)
Query: 137 MITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSML-ESGAKP 195
++ Y KF RVE A ++F M K + WN MI+GY +N + +++F+ ++ ES +
Sbjct: 160 IVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRL 219
Query: 196 NALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELF 255
+ +L +L + L L+LG Q+H L K+ S T IS+Y+KCG +K LF
Sbjct: 220 DTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALF 279
Query: 256 VQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLV 314
+ + DIV++NAMI GY +G E +L LF E+ G + T V+++ H L+
Sbjct: 280 REFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI 338
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 115/263 (43%), Gaps = 46/263 (17%)
Query: 5 STVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRM 64
S + ++ L+ K E AR+LF++ PE
Sbjct: 352 SHASVSTALTTVYSKLNEIESARKLFDESPE----------------------------- 382
Query: 65 EVKDTASWNTMISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSGYVACGDLDA-A 119
K SWN MISGY Q GL +A LF M + N V+ + ++S AC L A +
Sbjct: 383 --KSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILS---ACAQLGALS 437
Query: 120 VECFYAAPVR------SVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYV 173
+ + VR S+ TA+I Y K G + A RLF M+ K VTWN MI+GY
Sbjct: 438 LGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYG 497
Query: 174 ENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQV-HQLVCKSPLSSDT 232
+G+ ++ L +F ML SG P ++ VL CS+ ++ G ++ + ++ +
Sbjct: 498 LHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSV 557
Query: 233 TAGTSLISMYAKCGDLKEAWELF 255
++ + + G L+ A +
Sbjct: 558 KHYACMVDILGRAGHLQRALQFI 580
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 88/185 (47%), Gaps = 2/185 (1%)
Query: 144 FGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLES-GAKPNALSLTS 202
G + A +F + + +N ++ G+ N L +F + +S KPN+ +
Sbjct: 65 LGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAF 124
Query: 203 VLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKD 262
+ S + G+ +H S+ G++++ MY K +++A ++F ++P KD
Sbjct: 125 AISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKD 184
Query: 263 IVSWNAMISGYAQHGAGEKALHLFDEMRHDG-MKPDWITFVAVLLACNHAGLVDLGVQYF 321
+ WN MISGY ++ +++ +F ++ ++ + D T + +L A + LG+Q
Sbjct: 185 TILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIH 244
Query: 322 NMMVR 326
++ +
Sbjct: 245 SLATK 249
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 439 bits (1129), Expect = e-123, Method: Compositional matrix adjust.
Identities = 230/557 (41%), Positives = 325/557 (58%), Gaps = 9/557 (1%)
Query: 21 GNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYA 80
G A+++F + + NTV YN ++ L + A F ME KD+ SW MI G A
Sbjct: 188 GCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAMIKGLA 246
Query: 81 QVGLMGEASMLFAVMPEKNC-VSWSAMVSGYVACGDLDAAVEC--FYAAPVRS-----VI 132
Q GL EA F M + + S ACG L A E +A +R+ +
Sbjct: 247 QNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIY 306
Query: 133 TWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESG 192
+A+I Y K + A+ +F M K +V+W AM+ GY + GRAE+ +K+F M SG
Sbjct: 307 VGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSG 366
Query: 193 AKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAW 252
P+ +L + C+N+S+L+ G Q H S L T SL+++Y KCGD+ ++
Sbjct: 367 IDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDST 426
Query: 253 ELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAG 312
LF ++ +D VSW AM+S YAQ G + + LFD+M G+KPD +T V+ AC+ AG
Sbjct: 427 RLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAG 486
Query: 313 LVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTL 372
LV+ G +YF +M ++GI HY+CM+DL R+GRL EA+ I MPF P + TL
Sbjct: 487 LVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTL 546
Query: 373 LGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVV 432
L ACR NL++ ++AA++L+ELDP GY L+++YA++ +W+ VA++RR M+E V
Sbjct: 547 LSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVK 606
Query: 433 KAPGYSWIEISSEVHEFRSSDRLHPELASIHXXXXXXXXXXXXAGYVPDLEFALHDVGEE 492
K PG SWI+ ++H F + D P L I+ GY PD F HDV E
Sbjct: 607 KEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEA 666
Query: 493 LKEQLLLWHSEKLAIAYGLLKVPLGLPIRVFKNLRVCGDCHTAIKYISAIEGREIIVRDT 552
+K ++L +HSE+LAIA+GL+ VP G PIRV KNLRVC DCH A K+IS++ GREI+VRD
Sbjct: 667 VKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDA 726
Query: 553 TRFHHFKDGFCSCSDYW 569
RFH FKDG CSC D+W
Sbjct: 727 VRFHRFKDGTCSCGDFW 743
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 183/370 (49%), Gaps = 22/370 (5%)
Query: 8 TWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVK 67
+WN++L A++K G + FEK+P+ + V++N+++ + VG+A ++ M
Sbjct: 74 SWNNLLLAYSKA-GLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRD 132
Query: 68 DTASWN-----TMI-----SGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLD 117
+A+ TM+ +G+ +G ++ + E + S ++ Y G +
Sbjct: 133 FSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVI-KLGFESYLLVGSPLLYMYANVGCIS 191
Query: 118 AAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGR 177
A + FY R+ + + +++ G + G +E A +LFR M K V+W AMI G +NG
Sbjct: 192 DAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAMIKGLAQNGL 250
Query: 178 AEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTS 237
A++ ++ F+ M G K + SVL C L A+ GKQ+H + ++ G++
Sbjct: 251 AKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSA 310
Query: 238 LISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPD 297
LI MY KC L A +F ++ +K++VSW AM+ GY Q G E+A+ +F +M+ G+ PD
Sbjct: 311 LIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPD 370
Query: 298 WITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYAC----MVDLLGRAGRLPEA 353
T + AC + ++ G Q+ + I HY +V L G+ G + ++
Sbjct: 371 HYTLGQAISACANVSSLEEGSQFHGKAITSGLI-----HYVTVSNSLVTLYGKCGDIDDS 425
Query: 354 VDLIKSMPFK 363
L M +
Sbjct: 426 TRLFNEMNVR 435
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 139/351 (39%), Gaps = 66/351 (18%)
Query: 91 LFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESA 150
+ +P ++ +V Y A F P ++ +W ++ Y K G +
Sbjct: 32 IIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEM 91
Query: 151 ERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLES-GAKPNALSLTSVLLGCSN 209
E F ++ + VTWN +I GY +G +K + +M+ A ++L ++L S+
Sbjct: 92 ESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSS 151
Query: 210 LSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAK------------------------- 244
+ LGKQ+H V K S G+ L+ MYA
Sbjct: 152 NGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSL 211
Query: 245 ------CGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDW 298
CG +++A +LF + KD VSW AMI G AQ+G ++A+ F EM+ G+K D
Sbjct: 212 MGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQ 270
Query: 299 ITFVAVLLACNHAGLVDLGVQYFNMMVR--------------DFGIKTKPEHYA------ 338
F +VL AC G ++ G Q ++R D K K HYA
Sbjct: 271 YPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDR 330
Query: 339 ----------CMVDLLGRAGRLPEAVDLIKSMP---FKPHPAIFGTLLGAC 376
MV G+ GR EAV + M P G + AC
Sbjct: 331 MKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISAC 381
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 437 bits (1124), Expect = e-122, Method: Compositional matrix adjust.
Identities = 235/609 (38%), Positives = 338/609 (55%), Gaps = 43/609 (7%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAF 60
M V+ V+WNS++S + G+ A +LF+++PE + VS+ M+ V A
Sbjct: 92 MPVRDVVSWNSMISGCVE-CGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERL 150
Query: 61 FDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAV 120
F +M VKDTA+WN+M+ GY Q G + +A LF MP KN +SW+ M+ G A+
Sbjct: 151 FYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEAL 210
Query: 121 ECF----------YAAPVRSVITWTA-----------------------------MITGY 141
+ F + P VIT A +IT Y
Sbjct: 211 DLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFY 270
Query: 142 MKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLT 201
R+ + ++F E + + W A+++GY N + ED L +F ML + PN +
Sbjct: 271 ANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFA 330
Query: 202 SVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK 261
S L CS L L GK++H + K L +D G SL+ MY+ G++ +A +F++I +K
Sbjct: 331 SGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKK 390
Query: 262 DIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYF 321
IVSWN++I G AQHG G+ A +F +M +PD ITF +L AC+H G ++ G + F
Sbjct: 391 SIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLF 450
Query: 322 NMMVRDFG-IKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHK 380
M I K +HY CMVD+LGR G+L EA +LI+ M KP+ ++ LL ACR+H
Sbjct: 451 YYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHS 510
Query: 381 NLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWI 440
++D E AA + LD S+ YV L+N+YA+ RW +V+++R MK+N ++K PG SW+
Sbjct: 511 DVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWV 570
Query: 441 EISSEVHEFRSSDRLHPELASIHXXXXXXXXXXXXAGYVPDLEFALHDVGEELKEQLLLW 500
I + HEF S D+ P + I+ GY PD ALHDV +E KE++L +
Sbjct: 571 VIRGKKHEFFSGDQ--PHCSRIYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWY 628
Query: 501 HSEKLAIAYGLLKVPLGLPIRVFKNLRVCGDCHTAIKYISAIEGREIIVRDTTRFHHFKD 560
HSE+LAIA+GL+ G + V KNLRVC DCHT IK IS + GREI++RD RFHHFK+
Sbjct: 629 HSERLAIAFGLINTVEGSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKN 688
Query: 561 GFCSCSDYW 569
G CSC DYW
Sbjct: 689 GTCSCGDYW 697
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 114/356 (32%), Positives = 192/356 (53%), Gaps = 2/356 (0%)
Query: 24 EQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVG 83
++AR++F ++P P+ Y M+ + + A FD M V+D SWN+MISG + G
Sbjct: 52 DEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECG 111
Query: 84 LMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYMK 143
M A LF MPE++ VSW+AMV+G G +D A FY PV+ W +M+ GY++
Sbjct: 112 DMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQ 171
Query: 144 FGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSV 203
FG+V+ A +LF++M K +++W MI G +N R+ + L LFK+ML K + T V
Sbjct: 172 FGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCV 231
Query: 204 LLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDI 263
+ C+N A +G QVH L+ K + SLI+ YA C + ++ ++F + + +
Sbjct: 232 ITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQV 291
Query: 264 VSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNM 323
W A++SGY+ + E AL +F M + + P+ TF + L +C+ G +D G + +
Sbjct: 292 AVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGV 351
Query: 324 MVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIH 379
V+ G++T +V + +G + +AV + + FK + +++ C H
Sbjct: 352 AVK-LGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI-FKKSIVSWNSIIVGCAQH 405
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 113/213 (53%), Gaps = 12/213 (5%)
Query: 116 LDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVEN 175
+D A E F P V +T MITGY + R+ A LF EM ++ +V+WN+MI+G VE
Sbjct: 51 IDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVEC 110
Query: 176 GRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGK--QVHQLVCKSPLSSDTT 233
G +KLF M E + +S T+++ GC + GK Q +L + P+ DT
Sbjct: 111 GDMNTAVKLFDEMPER----SVVSWTAMVNGC-----FRSGKVDQAERLFYQMPV-KDTA 160
Query: 234 AGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDG 293
A S++ Y + G + +A +LF Q+P K+++SW MI G Q+ +AL LF M
Sbjct: 161 AWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCC 220
Query: 294 MKPDWITFVAVLLACNHAGLVDLGVQYFNMMVR 326
+K F V+ AC +A +G+Q ++++
Sbjct: 221 IKSTSRPFTCVITACANAPAFHMGIQVHGLIIK 253
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 436 bits (1121), Expect = e-122, Method: Compositional matrix adjust.
Identities = 233/613 (38%), Positives = 339/613 (55%), Gaps = 45/613 (7%)
Query: 2 KVKSTVTWNSILSAFAKKH------GNFEQARQLFEKIPEPNTVS------------YNI 43
+VKS VTWNS++S +A G F R + ++ E + S +
Sbjct: 256 EVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTE 315
Query: 44 MLACHLHHFG---------------------VGSARAFFDRMEVKDTASWNTMISGYAQV 82
L C + +G + + R F + V + SW MISG+ Q
Sbjct: 316 QLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQN 375
Query: 83 GLMGEASMLFAVMPEK----NCVSWSAMVSGYVACGDLDAAVECFYAAPVRSVITWTAMI 138
EA LF+ M K N ++S +++ + + RS TA++
Sbjct: 376 DGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALL 435
Query: 139 TGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNAL 198
Y+K G+VE A ++F + K +V W+AM+AGY + G E +K+F + + G KPN
Sbjct: 436 DAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEF 495
Query: 199 SLTSVLLGCSNLSA-LQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQ 257
+ +S+L C+ +A + GKQ H KS L S ++L++MYAK G+++ A E+F +
Sbjct: 496 TFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKR 555
Query: 258 IPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLG 317
KD+VSWN+MISGYAQHG KAL +F EM+ +K D +TF+ V AC HAGLV+ G
Sbjct: 556 QREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEG 615
Query: 318 VQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACR 377
+YF++MVRD I EH +CMVDL RAG+L +A+ +I++MP I+ T+L ACR
Sbjct: 616 EKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACR 675
Query: 378 IHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGY 437
+HK +L AA+ ++ + P + YV L+N+YA W+ A++R+ M E V K PGY
Sbjct: 676 VHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGY 735
Query: 438 SWIEISSEVHEFRSSDRLHPELASIHXXXXXXXXXXXXAGYVPDLEFALHDVGEELKEQL 497
SWIE+ ++ + F + DR HP I+ GY PD + L D+ +E KE +
Sbjct: 736 SWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAV 795
Query: 498 LLWHSEKLAIAYGLLKVPLGLPIRVFKNLRVCGDCHTAIKYISAIEGREIIVRDTTRFHH 557
L HSE+LAIA+GL+ P G P+ + KNLRVCGDCH IK I+ IE REI+VRD+ RFHH
Sbjct: 796 LAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHH 855
Query: 558 F-KDGFCSCSDYW 569
F DG CSC D+W
Sbjct: 856 FSSDGVCSCGDFW 868
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 196/411 (47%), Gaps = 63/411 (15%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKI----PEPNTVSY--------------- 41
MK ++ VTW +++S +A+ N ++ LF ++ +PN+ ++
Sbjct: 154 MKERNVVTWTTLISGYARNSMN-DEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGR 212
Query: 42 --------------------NIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQ 81
N ++ +L V AR FD+ EVK +WN+MISGYA
Sbjct: 213 GLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAA 272
Query: 82 VGLMGEA-SMLFAVMPEKNCVSWSAMVSGYVACGDLDAA--VECFYAAPVRSVITW---- 134
GL EA M +++ +S S+ S C +L E + + V+ +
Sbjct: 273 NGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI 332
Query: 135 -TAMITGYMKFGRVESAERLFREMS-LKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESG 192
TA++ Y K + A RLF+E+ + +V+W AMI+G+++N E+ + LF M G
Sbjct: 333 RTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG 392
Query: 193 AKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAW 252
+PN + + +L +S +VH V K+ +T GT+L+ Y K G ++EA
Sbjct: 393 VRPNEFTYSVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAA 448
Query: 253 ELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAG 312
++F I KDIV+W+AM++GYAQ G E A+ +F E+ G+KP+ TF ++L C
Sbjct: 449 KVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATN 508
Query: 313 L-VDLGVQYFNMMVRDFGIKTKPEHYAC----MVDLLGRAGRLPEAVDLIK 358
+ G Q+ F IK++ + C ++ + + G + A ++ K
Sbjct: 509 ASMGQGKQFHG-----FAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFK 554
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 135/260 (51%), Gaps = 9/260 (3%)
Query: 57 ARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVM----PEKNCVSWSAMVSGYVA 112
R FD M+ ++ +W T+ISGYA+ + E LF M + N +++A +
Sbjct: 147 GRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAE 206
Query: 113 CG----DLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAM 168
G L +++ ++I Y+K G V A LF + +K++VTWN+M
Sbjct: 207 EGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSM 266
Query: 169 IAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPL 228
I+GY NG + L +F SM + + + S SV+ C+NL L+ +Q+H V K
Sbjct: 267 ISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGF 326
Query: 229 SSDTTAGTSLISMYAKCGDLKEAWELFVQIP-RKDIVSWNAMISGYAQHGAGEKALHLFD 287
D T+L+ Y+KC + +A LF +I ++VSW AMISG+ Q+ E+A+ LF
Sbjct: 327 LFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFS 386
Query: 288 EMRHDGMKPDWITFVAVLLA 307
EM+ G++P+ T+ +L A
Sbjct: 387 EMKRKGVRPNEFTYSVILTA 406
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 133/261 (50%), Gaps = 8/261 (3%)
Query: 56 SARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMP----EKNCVSWSAMVS-GY 110
+A FD+ +D S+ +++ G+++ G EA LF + E +C +S+++
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSA 104
Query: 111 VACGDL---DAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNA 167
C +L +C + V T+++ YMK + ++F EM + +VTW
Sbjct: 105 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTT 164
Query: 168 MIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSP 227
+I+GY N ++ L LF M G +PN+ + + L + G QVH +V K+
Sbjct: 165 LISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG 224
Query: 228 LSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFD 287
L SLI++Y KCG++++A LF + K +V+WN+MISGYA +G +AL +F
Sbjct: 225 LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFY 284
Query: 288 EMRHDGMKPDWITFVAVLLAC 308
MR + ++ +F +V+ C
Sbjct: 285 SMRLNYVRLSESSFASVIKLC 305
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 115/224 (51%), Gaps = 1/224 (0%)
Query: 140 GYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALS 199
G + R+ +A LF + + ++ +++ G+ +GR ++ +LF ++ G + +
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 200 LTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIP 259
+SVL + L G+Q+H K D + GTSL+ Y K + K+ ++F ++
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK 155
Query: 260 RKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQ 319
+++V+W +ISGYA++ ++ L LF M+++G +P+ TF A L G+ G+Q
Sbjct: 156 ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ 215
Query: 320 YFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFK 363
++V++ KT P + +++L + G + +A L K
Sbjct: 216 VHTVVVKNGLDKTIPVSNS-LINLYLKCGNVRKARILFDKTEVK 258
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 433 bits (1113), Expect = e-121, Method: Compositional matrix adjust.
Identities = 246/627 (39%), Positives = 350/627 (55%), Gaps = 62/627 (9%)
Query: 4 KSTVTWNSILSAFAKKHGNFEQARQLFEKI-----PEPNTVSYNIMLAC----------H 48
+ VTWN++LS+ + E L E + P+ T+S +++ AC
Sbjct: 265 RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTIS-SVLPACSHLEMLRTGKE 323
Query: 49 LHHFG-----------VGSA--------------RAFFDRMEVKDTASWNTMISGYAQVG 83
LH + VGSA R FD M + WN MI+GY+Q
Sbjct: 324 LHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNE 383
Query: 84 LMGEASMLFAVMPEK-----NCVSWSAMVSGYVACGDLD--AAVECFYA--APVRSVITW 134
EA +LF M E N + + +V V G A+ F R
Sbjct: 384 HDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQ 443
Query: 135 TAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSM------ 188
++ Y + G+++ A R+F +M + LVTWN MI GYV + ED L L M
Sbjct: 444 NTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERK 503
Query: 189 LESGA-----KPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYA 243
+ GA KPN+++L ++L C+ LSAL GK++H K+ L++D G++L+ MYA
Sbjct: 504 VSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYA 563
Query: 244 KCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVA 303
KCG L+ + ++F QIP+K++++WN +I Y HG G++A+ L M G+KP+ +TF++
Sbjct: 564 KCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFIS 623
Query: 304 VLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFK 363
V AC+H+G+VD G++ F +M D+G++ +HYAC+VDLLGRAGR+ EA L+ MP
Sbjct: 624 VFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRD 683
Query: 364 PHPA-IFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARI 422
+ A + +LLGA RIH NL++ E AA+NL++L+P+ A+ YV LAN+Y++ W+ +
Sbjct: 684 FNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEV 743
Query: 423 RRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIHXXXXXXXXXXXXAGYVPDL 482
RR+MKE V K PG SWIE EVH+F + D HP+ + GYVPD
Sbjct: 744 RRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDT 803
Query: 483 EFALHDVGEELKEQLLLWHSEKLAIAYGLLKVPLGLPIRVFKNLRVCGDCHTAIKYISAI 542
LH+V E+ KE LL HSEKLAIA+G+L G IRV KNLRVC DCH A K+IS I
Sbjct: 804 SCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKI 863
Query: 543 EGREIIVRDTTRFHHFKDGFCSCSDYW 569
REII+RD RFH FK+G CSC DYW
Sbjct: 864 VDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 145/318 (45%), Gaps = 13/318 (4%)
Query: 55 GSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWS-AMVSGYVAC 113
G+ FDR+ ++ SWN++IS A F M ++N S +VS AC
Sbjct: 150 GAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTAC 209
Query: 114 GDLDAAVECFYAAPVRSV---------ITWTAMITGYMKFGRVESAERLFREMSLKTLVT 164
+L V + ++ Y K G++ S++ L + LVT
Sbjct: 210 SNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVT 269
Query: 165 WNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVC 224
WN +++ +N + + L+ + M+ G +P+ +++SVL CS+L L+ GK++H
Sbjct: 270 WNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYAL 329
Query: 225 KS-PLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKAL 283
K+ L ++ G++L+ MY C + +F + + I WNAMI+GY+Q+ ++AL
Sbjct: 330 KNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEAL 389
Query: 284 HLFDEMRHD-GMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVD 342
LF M G+ + T V+ AC +G +V+ G+ ++D
Sbjct: 390 LLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKR-GLDRDRFVQNTLMD 448
Query: 343 LLGRAGRLPEAVDLIKSM 360
+ R G++ A+ + M
Sbjct: 449 MYSRLGKIDIAMRIFGKM 466
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 177/426 (41%), Gaps = 72/426 (16%)
Query: 4 KSTVTWNSILSA---FAKKHGNFEQARQLFEKIPEPNTVSY--------------NIMLA 46
++ V+WNS++S+ F K E R + ++ EP++ + +M+
Sbjct: 162 RNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMG 221
Query: 47 CHLHHFGV-----------------------GSARAFFDRMEVKDTASWNTMISGYAQVG 83
+H +G+ S++ +D +WNT++S Q
Sbjct: 222 KQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNE 281
Query: 84 LMGEA------SMLFAVMPEKNCVSWSAMVSGYVACGDLDA--------AVECFYAAPVR 129
+ EA +L V P++ +S S AC L+ A +
Sbjct: 282 QLLEALEYLREMVLEGVEPDEFTIS-----SVLPACSHLEMLRTGKELHAYALKNGSLDE 336
Query: 130 SVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSML 189
+ +A++ Y +V S R+F M + + WNAMIAGY +N ++ L LF M
Sbjct: 337 NSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGME 396
Query: 190 ES-GAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDL 248
ES G N+ ++ V+ C A + +H V K L D +L+ MY++ G +
Sbjct: 397 ESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKI 456
Query: 249 KEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRH-----------DGMKPD 297
A +F ++ +D+V+WN MI+GY E AL L +M++ +KP+
Sbjct: 457 DIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPN 516
Query: 298 WITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLI 357
IT + +L +C + G + +++ + T + +VD+ + G L + +
Sbjct: 517 SITLMTILPSCAALSALAKGKEIHAYAIKN-NLATDVAVGSALVDMYAKCGCLQMSRKVF 575
Query: 358 KSMPFK 363
+P K
Sbjct: 576 DQIPQK 581
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 102/194 (52%), Gaps = 6/194 (3%)
Query: 128 VRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKS 187
V SV ++ Y K G + ++F +S + V+WN++I+ + E L+ F+
Sbjct: 130 VDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRC 189
Query: 188 MLESGAKPNALSLTSVLLGCSNL---SALQLGKQVHQL-VCKSPLSSDTTAGTSLISMYA 243
ML+ +P++ +L SV+ CSNL L +GKQVH + K L+S +L++MY
Sbjct: 190 MLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII--NTLVAMYG 247
Query: 244 KCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVA 303
K G L + L +D+V+WN ++S Q+ +AL EM +G++PD T +
Sbjct: 248 KLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISS 307
Query: 304 VLLACNHAGLVDLG 317
VL AC+H ++ G
Sbjct: 308 VLPACSHLEMLRTG 321
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 121/246 (49%), Gaps = 15/246 (6%)
Query: 165 WNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVC 224
W ++ V + + + + M+ G KP+ + ++L ++L ++LGKQ+H V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 225 KSPLSSDT-TAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKAL 283
K D+ T +L+++Y KCGD +++F +I ++ VSWN++IS E AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 284 HLFDEMRHDGMKPDWITFVAVLLACNHAGLVD---LGVQYFNMMVRDFGIKTKPEHYACM 340
F M + ++P T V+V+ AC++ + + +G Q V +G++ K E + +
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQ-----VHAYGLR-KGELNSFI 238
Query: 341 VDLL----GRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLE-L 395
++ L G+ G+L + L+ S + L C+ + L+ E+ + +LE +
Sbjct: 239 INTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGV 298
Query: 396 DPSSAT 401
+P T
Sbjct: 299 EPDEFT 304
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 432 bits (1112), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/574 (38%), Positives = 336/574 (58%), Gaps = 38/574 (6%)
Query: 5 STVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRM 64
+ V+WN ILS F + G ++A +F+KI HH G + +
Sbjct: 216 NIVSWNGILSGF-NRSGYHKEAVVMFQKI----------------HHLGFCPDQVTVSSV 258
Query: 65 --EVKDTASWNT--MISGYA-QVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAA 119
V D+ N +I GY + GL+ + ++ SAM+ Y G +
Sbjct: 259 LPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVI------------SAMIDMYGKSGHVYGI 306
Query: 120 VECFYAAPVRSVITWTAMITGYMKFGRVESAER---LFREMSLK-TLVTWNAMIAGYVEN 175
+ F + A ITG + G V+ A LF+E +++ +V+W ++IAG +N
Sbjct: 307 ISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQN 366
Query: 176 GRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAG 235
G+ + L+LF+ M +G KPN +++ S+L C N++AL G+ H + L + G
Sbjct: 367 GKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVG 426
Query: 236 TSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMK 295
++LI MYAKCG + + +F +P K++V WN++++G++ HG ++ + +F+ + +K
Sbjct: 427 SALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLK 486
Query: 296 PDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVD 355
PD+I+F ++L AC GL D G +YF MM ++GIK + EHY+CMV+LLGRAG+L EA D
Sbjct: 487 PDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYD 546
Query: 356 LIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNR 415
LIK MPF+P ++G LL +CR+ N+DLAE AA+ L L+P + YV L+N+YAA+
Sbjct: 547 LIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGM 606
Query: 416 WEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIHXXXXXXXXXXXX 475
W V IR M+ + K PG SWI++ + V+ + D+ HP++ I
Sbjct: 607 WTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRK 666
Query: 476 AGYVPDLEFALHDVGEELKEQLLLWHSEKLAIAYGLLKVPLGLPIRVFKNLRVCGDCHTA 535
+G+ P+L+FALHDV E+ +EQ+L HSEKLA+ +GLL P G P++V KNLR+CGDCH
Sbjct: 667 SGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAV 726
Query: 536 IKYISAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
IK+IS+ GREI +RDT RFHHFKDG CSC D+W
Sbjct: 727 IKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 168/395 (42%), Gaps = 62/395 (15%)
Query: 23 FEQARQLFEKIPEPNTVSYNIML----ACHLHHFGVGSARAFFDRMEVKDTASWNTMISG 78
F A + + IP+P S++ ++ L +G F + D+ +
Sbjct: 66 FNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKV 125
Query: 79 YAQVGLMGEASMLFAVMPEKNCVS------WSAMVSG-----YVACGDLDAAVECFYAAP 127
A++ F V + +CVS A V G Y+ CG + A + F
Sbjct: 126 CAELSA-------FKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMS 178
Query: 128 VRSVITWTAMITGYMKFGRVESAERLFREMSLK----TLVTWNAMIAGYVENGRAEDGLK 183
+ V+T +A++ Y + G +E R+ EM +V+WN +++G+ +G ++ +
Sbjct: 179 DKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVV 238
Query: 184 LFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYA 243
+F+ + G P+ ++++SVL + L +G+ +H V K L D +++I MY
Sbjct: 239 MFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYG 298
Query: 244 KCGDLK----------------------------------EAWELFV-QIPRKDIVSWNA 268
K G + E +ELF Q ++VSW +
Sbjct: 299 KSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTS 358
Query: 269 MISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDF 328
+I+G AQ+G +AL LF EM+ G+KP+ +T ++L AC + + G VR
Sbjct: 359 IIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVR-V 417
Query: 329 GIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFK 363
+ + ++D+ + GR+ + + MP K
Sbjct: 418 HLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK 452
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 134/306 (43%), Gaps = 39/306 (12%)
Query: 137 MITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPN 196
+I Y + A+ + + + T+ +++++I + + +F M G P+
Sbjct: 56 LIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPD 115
Query: 197 ALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFV 256
+ L ++ C+ LSA ++GKQ+H + C S L D S+ MY +CG + +A ++F
Sbjct: 116 SHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFD 175
Query: 257 QIPRKD-----------------------------------IVSWNAMISGYAQHGAGEK 281
++ KD IVSWN ++SG+ + G ++
Sbjct: 176 RMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKE 235
Query: 282 ALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMV 341
A+ +F ++ H G PD +T +VL + + ++++G +++ +K K + M+
Sbjct: 236 AVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCV-ISAMI 294
Query: 342 DLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACR---IHKNLDLAEFAAKNLLELDPS 398
D+ G++G + + L + G R + K L++ E + +EL+
Sbjct: 295 DMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVV 354
Query: 399 SATGYV 404
S T +
Sbjct: 355 SWTSII 360
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 432 bits (1112), Expect = e-121, Method: Compositional matrix adjust.
Identities = 245/664 (36%), Positives = 350/664 (52%), Gaps = 96/664 (14%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIPE-----PNTVSY-NIMLAC------- 47
M V V+WNSI+ ++AK G + A ++F ++ P+ ++ N++ C
Sbjct: 188 MSVWDVVSWNSIIESYAKL-GKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHS 246
Query: 48 ---HLHHFGVGS------------------------ARAFFDRMEVKDTASWNTMISGYA 80
LH F V S A F M VKD SWN M++GY+
Sbjct: 247 LGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYS 306
Query: 81 QVGLMGEASMLFAVMPEK----NCVSWSAMVSGYV------------------------- 111
Q+G +A LF M E+ + V+WSA +SGY
Sbjct: 307 QIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEV 366
Query: 112 -------ACGDLDA-----AVECF---YAAPVRSV------ITWTAMITGYMKFGRVESA 150
C + A + C+ Y +R + +I Y K +V++A
Sbjct: 367 TLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTA 426
Query: 151 ERLFREMSLK--TLVTWNAMIAGYVENGRAEDGLKLFKSMLESG--AKPNALSLTSVLLG 206
+F +S K +VTW MI GY ++G A L+L M E +PNA +++ L+
Sbjct: 427 RAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVA 486
Query: 207 CSNLSALQLGKQVHQLVCKSPLSS-DTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVS 265
C++L+AL++GKQ+H ++ ++ LI MYAKCG + +A +F + K+ V+
Sbjct: 487 CASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVT 546
Query: 266 WNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMV 325
W ++++GY HG GE+AL +FDEMR G K D +T + VL AC+H+G++D G++YFN M
Sbjct: 547 WTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMK 606
Query: 326 RDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLA 385
FG+ PEHYAC+VDLLGRAGRL A+ LI+ MP +P P ++ L CRIH ++L
Sbjct: 607 TVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELG 666
Query: 386 EFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSE 445
E+AA+ + EL + Y L+N+YA RW+ V RIR M+ V K PG SW+E
Sbjct: 667 EYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKG 726
Query: 446 VHEFRSSDRLHPELASIHXXXXXXXXXXXXAGYVPDLEFALHDVGEELKEQLLLWHSEKL 505
F D+ HP I+ GYVP+ FALHDV +E K+ LL HSEKL
Sbjct: 727 TTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKL 786
Query: 506 AIAYGLLKVPLGLPIRVFKNLRVCGDCHTAIKYISAIEGREIIVRDTTRFHHFKDGFCSC 565
A+AYG+L P G IR+ KNLRVCGDCHTA Y+S I +II+RD++RFHHFK+G CSC
Sbjct: 787 ALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSC 846
Query: 566 SDYW 569
YW
Sbjct: 847 KGYW 850
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/379 (29%), Positives = 172/379 (45%), Gaps = 55/379 (14%)
Query: 37 NTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGL------------ 84
N N ++A + + AR FD M V D SWN++I YA++G
Sbjct: 161 NVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMT 220
Query: 85 --------------------------MGEASMLFAVMPE--KNCVSWSAMVSGYVACGDL 116
+G+ FAV E +N + +V Y CG +
Sbjct: 221 NEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMM 280
Query: 117 DAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTL----VTWNAMIAGY 172
D A F V+ V++W AM+ GY + GR E A RLF +M + + VTW+A I+GY
Sbjct: 281 DEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGY 340
Query: 173 VENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLS--- 229
+ G + L + + ML SG KPN ++L SVL GC+++ AL GK++H K P+
Sbjct: 341 AQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRK 400
Query: 230 ----SDTTAGTSLISMYAKCGDLKEAWELFVQIPRK--DIVSWNAMISGYAQHGAGEKAL 283
+ LI MYAKC + A +F + K D+V+W MI GY+QHG KAL
Sbjct: 401 NGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKAL 460
Query: 284 HLFDEMRHDG--MKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMV 341
L EM + +P+ T L+AC + +G Q +R+ C++
Sbjct: 461 ELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLI 520
Query: 342 DLLGRAGRLPEAVDLIKSM 360
D+ + G + +A + +M
Sbjct: 521 DMYAKCGSISDARLVFDNM 539
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 163/320 (50%), Gaps = 22/320 (6%)
Query: 12 ILSAFAKKHGNFEQARQLFEKIPEPNTVSYNI---MLACHLHHFGVGSARAFFDRMEVKD 68
I F K Q + + +K+ ++ N+ +++ ++ + A + R D
Sbjct: 30 ITPPFIHKCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSD 89
Query: 69 TA--SWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWS----AMVSGYVACGDLDAAVEC 122
WN++I Y G + LF +M + +SW+ + ACG++ ++V C
Sbjct: 90 AGVYHWNSLIRSYGDNGCANKCLYLFGLM---HSLSWTPDNYTFPFVFKACGEI-SSVRC 145
Query: 123 FYAAPVRSVITW--------TAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVE 174
+A S++T A++ Y + + A ++F EMS+ +V+WN++I Y +
Sbjct: 146 GESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAK 205
Query: 175 NGRAEDGLKLFKSML-ESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTT 233
G+ + L++F M E G +P+ ++L +VL C++L LGKQ+H S + +
Sbjct: 206 LGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMF 265
Query: 234 AGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDG 293
G L+ MYAKCG + EA +F + KD+VSWNAM++GY+Q G E A+ LF++M+ +
Sbjct: 266 VGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEK 325
Query: 294 MKPDWITFVAVLLACNHAGL 313
+K D +T+ A + GL
Sbjct: 326 IKMDVVTWSAAISGYAQRGL 345
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 432 bits (1110), Expect = e-121, Method: Compositional matrix adjust.
Identities = 229/562 (40%), Positives = 324/562 (57%), Gaps = 47/562 (8%)
Query: 54 VGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFA------VMPEK----NCVS- 102
+ AR FD M +D +WNTMI Y + GL+ EA LF VMP++ N VS
Sbjct: 162 INYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSA 221
Query: 103 ----------------------------WSAMVSGYVACGDLDAAVECFYAAPVRSVITW 134
+A+V+ Y G +D A E F VR++
Sbjct: 222 CGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVS 281
Query: 135 TAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAK 194
TAM++GY K GR++ A+ +F + K LV W MI+ YVE+ ++ L++F+ M SG K
Sbjct: 282 TAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIK 341
Query: 195 PNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWEL 254
P+ +S+ SV+ C+NL L K VH + + L S+ + +LI+MYAKCG L ++
Sbjct: 342 PDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDV 401
Query: 255 FVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLV 314
F ++PR+++VSW++MI+ + HG AL LF M+ + ++P+ +TFV VL C+H+GLV
Sbjct: 402 FEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLV 461
Query: 315 DLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLG 374
+ G + F M ++ I K EHY CMVDL GRA L EA+++I+SMP + I+G+L+
Sbjct: 462 EEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMS 521
Query: 375 ACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKA 434
ACRIH L+L +FAAK +LEL+P V ++N+YA + RWE V IRR M+E V K
Sbjct: 522 ACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKE 581
Query: 435 PGYSWIEISSEVHEFRSSDRLHPELASIHXXXXXXXXXXXXAGYVPDLEFALHDVGEELK 494
G S I+ + + HEF D+ H + I+ AGYVPD L DV EE K
Sbjct: 582 KGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEK 641
Query: 495 EQLLLWHSEKLAIAYGLL-------KVPLGLPIRVFKNLRVCGDCHTAIKYISAIEGREI 547
+ L+LWHSEKLA+ +GL+ K G+ IR+ KNLRVC DCH K +S + REI
Sbjct: 642 KDLVLWHSEKLALCFGLMNEEKEEEKDSCGV-IRIVKNLRVCEDCHLFFKLVSKVYEREI 700
Query: 548 IVRDTTRFHHFKDGFCSCSDYW 569
IVRD TRFH +K+G CSC DYW
Sbjct: 701 IVRDRTRFHCYKNGLCSCRDYW 722
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 144/300 (48%), Gaps = 35/300 (11%)
Query: 135 TAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAK 194
T + Y GR+ A +F EMS + +VTWN MI Y G ++ KLF+ M +S
Sbjct: 150 TGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVM 209
Query: 195 PNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYA----------- 243
P+ + L +++ C ++ + +++ + ++ + DT T+L++MYA
Sbjct: 210 PDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREF 269
Query: 244 --------------------KCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKAL 283
KCG L +A +F Q +KD+V W MIS Y + ++AL
Sbjct: 270 FRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEAL 329
Query: 284 HLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDL 343
+F+EM G+KPD ++ +V+ AC + G++D ++ + + G++++ ++++
Sbjct: 330 RVFEEMCCSGIKPDVVSMFSVISACANLGILD-KAKWVHSCIHVNGLESELSINNALINM 388
Query: 344 LGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLD--LAEFAAKNLLELDPSSAT 401
+ G L D+ + MP + + + +++ A +H L+ FA ++P+ T
Sbjct: 389 YAKCGGLDATRDVFEKMP-RRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVT 447
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 88/201 (43%), Gaps = 1/201 (0%)
Query: 163 VTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQL 222
+ +N + + + ++ + G + + S +L S +SAL G ++H +
Sbjct: 77 IVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGV 136
Query: 223 VCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKA 282
K D T + MYA CG + A +F ++ +D+V+WN MI Y + G ++A
Sbjct: 137 AFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEA 196
Query: 283 LHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVD 342
LF+EM+ + PD + ++ AC G + + ++ + ++ +V
Sbjct: 197 FKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEN-DVRMDTHLLTALVT 255
Query: 343 LLGRAGRLPEAVDLIKSMPFK 363
+ AG + A + + M +
Sbjct: 256 MYAGAGCMDMAREFFRKMSVR 276
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 430 bits (1106), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/521 (41%), Positives = 318/521 (61%), Gaps = 8/521 (1%)
Query: 57 ARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYV-ACGD 115
AR FD M + SWNTMI Y + + EA +F M + +S + ACG
Sbjct: 115 ARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGV 174
Query: 116 LDAAVEC--FYAAPVRSVITW-----TAMITGYMKFGRVESAERLFREMSLKTLVTWNAM 168
A+EC + V++ I TA++ Y K G ++ A ++F M K+ VTW++M
Sbjct: 175 NCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSM 234
Query: 169 IAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPL 228
+AGYV+N E+ L L++ + N +L+SV+ CSNL+AL GKQ+H ++CKS
Sbjct: 235 VAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGF 294
Query: 229 SSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDE 288
S+ +S + MYAKCG L+E++ +F ++ K++ WN +ISG+A+H ++ + LF++
Sbjct: 295 GSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEK 354
Query: 289 MRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAG 348
M+ DGM P+ +TF ++L C H GLV+ G ++F +M +G+ HY+CMVD+LGRAG
Sbjct: 355 MQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAG 414
Query: 349 RLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLAN 408
L EA +LIKS+PF P +I+G+LL +CR++KNL+LAE AA+ L EL+P +A +V L+N
Sbjct: 415 LLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSN 474
Query: 409 VYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIHXXXXX 468
+YAA +WE +A+ R+ +++ V K G SWI+I +VH F + HP + I
Sbjct: 475 IYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDN 534
Query: 469 XXXXXXXAGYVPDLEFALHDVGEELKEQLLLWHSEKLAIAYGLLKVPLGLPIRVFKNLRV 528
GY P +E LHDV KE+LL+ HSEKLA+ +GL+ +P P+R+ KNLR+
Sbjct: 535 LVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRI 594
Query: 529 CGDCHTAIKYISAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
C DCH +K S R IIVRD RFHHF DG CSC D+W
Sbjct: 595 CVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 147/343 (42%), Gaps = 81/343 (23%)
Query: 10 NSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRME---- 65
N +++A++K G E ARQ+F+ + E + VS+N M+ + + A F M
Sbjct: 100 NVLINAYSK-CGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGF 158
Query: 66 ------------------------------VKDTASWN-----TMISGYAQVGLMGEASM 90
VK N ++ YA+ G++ +A
Sbjct: 159 KFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQ 218
Query: 91 LFAVMPEKNCVSWSAMVSGYV--------------------------------ACGDLDA 118
+F M +K+ V+WS+MV+GYV AC +L A
Sbjct: 219 VFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAA 278
Query: 119 AVEC--FYAAPVRS-----VITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAG 171
+E +A +S V ++ + Y K G + + +F E+ K L WN +I+G
Sbjct: 279 LIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISG 338
Query: 172 YVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKS-PLSS 230
+ ++ R ++ + LF+ M + G PN ++ +S+L C + ++ G++ +L+ + LS
Sbjct: 339 FAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSP 398
Query: 231 DTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVS-WNAMISG 272
+ + ++ + + G L EA+EL IP S W ++++
Sbjct: 399 NVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLAS 441
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 1/161 (0%)
Query: 203 VLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKD 262
+L C+ A+ K H + + L D T LI+ Y+KCG ++ A ++F + +
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 263 IVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFN 322
+VSWN MI Y ++ +AL +F EMR++G K T +VL AC L + +
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACG-VNCDALECKKLH 185
Query: 323 MMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFK 363
+ I ++DL + G + +AV + +SM K
Sbjct: 186 CLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDK 226
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 430 bits (1105), Expect = e-120, Method: Compositional matrix adjust.
Identities = 223/522 (42%), Positives = 306/522 (58%), Gaps = 9/522 (1%)
Query: 56 SARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYV-ACG 114
+AR FD M ++ SWN+MI Y Q EA ++F M ++ V G + AC
Sbjct: 289 TARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACA 348
Query: 115 DLDAAVECFYAAPV-------RSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNA 167
DL + + R+V ++I+ Y K V++A +F ++ +TLV+WNA
Sbjct: 349 DLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNA 408
Query: 168 MIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSP 227
MI G+ +NGR D L F M KP+ + SV+ + LS K +H +V +S
Sbjct: 409 MILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSC 468
Query: 228 LSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFD 287
L + T+L+ MYAKCG + A +F + + + +WNAMI GY HG G+ AL LF+
Sbjct: 469 LDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFE 528
Query: 288 EMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRA 347
EM+ +KP+ +TF++V+ AC+H+GLV+ G++ F MM ++ I+ +HY MVDLLGRA
Sbjct: 529 EMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRA 588
Query: 348 GRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLA 407
GRL EA D I MP KP ++G +LGAC+IHKN++ AE AA+ L EL+P +V LA
Sbjct: 589 GRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLA 648
Query: 408 NVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIHXXXX 467
N+Y A + WE V ++R SM + K PG S +EI +EVH F S HP+ I+
Sbjct: 649 NIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLE 708
Query: 468 XXXXXXXXAGYVPDLEFALHDVGEELKEQLLLWHSEKLAIAYGLLKVPLGLPIRVFKNLR 527
AGYVPD L V ++KEQLL HSEKLAI++GLL G I V KNLR
Sbjct: 709 KLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLR 767
Query: 528 VCGDCHTAIKYISAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
VC DCH A KYIS + GREI+VRD RFHHFK+G CSC DYW
Sbjct: 768 VCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 113/364 (31%), Positives = 183/364 (50%), Gaps = 41/364 (11%)
Query: 54 VGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCV-SWSAMVSGYVA 112
V AR FDRM +D SWNT+++GY+Q G+ A + M E+N S+ +VS A
Sbjct: 186 VNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPA 245
Query: 113 CGDLD--AAVECFYAAPVRS-----VITWTAMITGYMKFGRVESAERLFREMSLKTLVTW 165
L + + + +RS V TA++ Y K G +E+A +LF M + +V+W
Sbjct: 246 VSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSW 305
Query: 166 NAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCK 225
N+MI YV+N ++ + +F+ ML+ G KP +S+ L C++L L+ G+ +H+L +
Sbjct: 306 NSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVE 365
Query: 226 SPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHL 285
L + + SLISMY KC ++ A +F ++ + +VSWNAMI G+AQ+G AL+
Sbjct: 366 LGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNY 425
Query: 286 FDEMRHDGMKPDWITFVAVLLA------CNHA--------------------GLVDLGVQ 319
F +MR +KPD T+V+V+ A +HA LVD+ +
Sbjct: 426 FSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAK 485
Query: 320 YFNMMVRDFGIKTKPEHYA----CMVDLLGRAGRLPEAVDLIKSM---PFKPHPAIFGTL 372
+M+ E + M+D G G A++L + M KP+ F ++
Sbjct: 486 CGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSV 545
Query: 373 LGAC 376
+ AC
Sbjct: 546 ISAC 549
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 182/403 (45%), Gaps = 47/403 (11%)
Query: 75 MISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFY------AAPV 128
++S + + G + EA+ +F + K V + M+ G+ DLD A++ F PV
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPV 134
Query: 129 RSVITWTAMITG---------------------------------YMKFGRVESAERLFR 155
T+ + G Y K +V A ++F
Sbjct: 135 VYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFD 194
Query: 156 EMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQL 215
M + LV+WN ++AGY +NG A L++ KSM E KP+ +++ SVL S L + +
Sbjct: 195 RMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISV 254
Query: 216 GKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQ 275
GK++H +S S T+L+ MYAKCG L+ A +LF + +++VSWN+MI Y Q
Sbjct: 255 GKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQ 314
Query: 276 HGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPE 335
+ ++A+ +F +M +G+KP ++ + L AC G ++ G ++ + + + G+
Sbjct: 315 NENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERG-RFIHKLSVELGLDRNVS 373
Query: 336 HYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLD-LAEFAAKNLLE 394
++ + + + A + + + + +LG + + +D L F+
Sbjct: 374 VVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRT 433
Query: 395 LDPSSATGYVQLANVYAA-----QNRWEHVARIRRSMKENKVV 432
+ P + T YV + A +W H +R + +N V
Sbjct: 434 VKPDTFT-YVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFV 475
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 122/226 (53%), Gaps = 1/226 (0%)
Query: 135 TAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAK 194
T +++ + ++G V+ A R+F + K V ++ M+ G+ + + L+ F M +
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVE 132
Query: 195 PNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWEL 254
P + T +L C + + L++GK++H L+ KS S D A T L +MYAKC + EA ++
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKV 192
Query: 255 FVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLV 314
F ++P +D+VSWN +++GY+Q+G AL + M + +KP +IT V+VL A + L+
Sbjct: 193 FDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLI 252
Query: 315 DLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSM 360
+G + +R G + +VD+ + G L A L M
Sbjct: 253 SVGKEIHGYAMRS-GFDSLVNISTALVDMYAKCGSLETARQLFDGM 297
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 154/347 (44%), Gaps = 62/347 (17%)
Query: 4 KSTVTWNSILSAFAKKHGNFEQARQLFEKIPE----PNTVSYNIMLACH----------- 48
++ V+WNS++ A+ + N ++A +F+K+ + P VS +M A H
Sbjct: 300 RNVVSWNSMIDAYVQNE-NPKEAMLIFQKMLDEGVKPTDVS--VMGALHACADLGDLERG 356
Query: 49 --LHHFGV------------------------GSARAFFDRMEVKDTASWNTMISGYAQV 82
+H V +A + F +++ + SWN MI G+AQ
Sbjct: 357 RFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQN 416
Query: 83 GLMGEASMLFAVMPEKNCVSWS-AMVSGYVACGDLDAA--VECFYAAPVRS-----VITW 134
G +A F+ M + + VS A +L + + +RS V
Sbjct: 417 GRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVT 476
Query: 135 TAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAK 194
TA++ Y K G + A +F MS + + TWNAMI GY +G + L+LF+ M + K
Sbjct: 477 TALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIK 536
Query: 195 PNALSLTSVLLGCSNLSALQLGKQVHQLVCKS---PLSSDTTAGTSLISMYAKCGDLKEA 251
PN ++ SV+ CS+ ++ G + ++ ++ LS D +++ + + G L EA
Sbjct: 537 PNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYG--AMVDLLGRAGRLNEA 594
Query: 252 WELFVQIPRKDIVS-WNAMISGYAQHG----AGEKALHLFDEMRHDG 293
W+ +Q+P K V+ + AM+ H A + A LF+ DG
Sbjct: 595 WDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDG 641
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 4/155 (2%)
Query: 207 CSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSW 266
CS+L L +Q+ LV K+ L + T L+S++ + G + EA +F I K V +
Sbjct: 47 CSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLY 103
Query: 267 NAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVR 326
+ M+ G+A+ +KAL F MR+D ++P F +L C + +G + ++V+
Sbjct: 104 HTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVK 163
Query: 327 DFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMP 361
G + ++ + ++ EA + MP
Sbjct: 164 S-GFSLDLFAMTGLENMYAKCRQVNEARKVFDRMP 197
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 427 bits (1099), Expect = e-120, Method: Compositional matrix adjust.
Identities = 221/533 (41%), Positives = 315/533 (59%), Gaps = 20/533 (3%)
Query: 54 VGSARAFFDRMEVKDTASWNTMISGYAQ-VGLMGEASMLFAVM-----PEKNCVSWSAMV 107
V R FDRME SW +I+GY + L EA LF+ M E N ++S
Sbjct: 321 VDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFS--- 377
Query: 108 SGYVACGDL-DAAV------ECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLK 160
S + ACG+L D V + F + ++I+ ++K R+E A+R F +S K
Sbjct: 378 SAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK 437
Query: 161 TLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVH 220
LV++N + G N E KL + E +A + S+L G +N+ +++ G+Q+H
Sbjct: 438 NLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIH 497
Query: 221 QLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGE 280
V K LS + +LISMY+KCG + A +F + ++++SW +MI+G+A+HG
Sbjct: 498 SQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAI 557
Query: 281 KALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACM 340
+ L F++M +G+KP+ +T+VA+L AC+H GLV G ++FN M D IK K EHYACM
Sbjct: 558 RVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACM 617
Query: 341 VDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSA 400
VDLL RAG L +A + I +MPF+ ++ T LGACR+H N +L + AA+ +LELDP+
Sbjct: 618 VDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEP 677
Query: 401 TGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELA 460
Y+QL+N+YA +WE +RR MKE +VK G SWIE+ ++H+F D HP
Sbjct: 678 AAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAH 737
Query: 461 SIHXXXXXXXXXXXXAGYVPDLEFALHDV----GEELKEQLLLWHSEKLAIAYGLLKVPL 516
I+ GYVPD + LH + E KE+LL HSEK+A+A+GL+
Sbjct: 738 QIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSK 797
Query: 517 GLPIRVFKNLRVCGDCHTAIKYISAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
P+RVFKNLRVCGDCH A+KYIS + GREI++RD RFHHFKDG CSC+DYW
Sbjct: 798 SRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 185/396 (46%), Gaps = 30/396 (7%)
Query: 6 TVTWNSILSAFAK----KHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFF 61
+VT++S+L + + + G AR L E EP++V YN +++ + A F
Sbjct: 62 SVTFSSLLKSCIRARDFRLGKLVHAR-LIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVF 120
Query: 62 DRME---VKDTASWNTMISGYAQVGLMGEASMLF------AVMPEKNCVSWSAMV----- 107
+ M +D SW+ M++ Y G +A +F ++P C ++A++
Sbjct: 121 ETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYC--YTAVIRACSN 178
Query: 108 SGYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKF-GRVESAERLFREMSLKTLVTWN 166
S +V G + V ++I ++K E+A ++F +MS +VTW
Sbjct: 179 SDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWT 238
Query: 167 AMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKS 226
MI ++ G + ++ F M+ SG + + +L+SV C+ L L LGKQ+H +S
Sbjct: 239 LMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRS 298
Query: 227 PLSSDTTAGTSLISMYAKC---GDLKEAWELFVQIPRKDIVSWNAMISGYAQH-GAGEKA 282
L D SL+ MYAKC G + + ++F ++ ++SW A+I+GY ++ +A
Sbjct: 299 GLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEA 356
Query: 283 LHLFDEMRHDG-MKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMV 341
++LF EM G ++P+ TF + AC + +G Q + G+ + ++
Sbjct: 357 INLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKR-GLASNSSVANSVI 415
Query: 342 DLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACR 377
+ ++ R+ +A +S+ K + L G CR
Sbjct: 416 SMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCR 451
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 83/156 (53%), Gaps = 4/156 (2%)
Query: 166 NAMIAGYVENGRAEDGLKLFKSMLESGAKP-NALSLTSVLLGCSNLSALQLGKQVHQLVC 224
+ +I ++ G + M G +P ++++ +S+L C +LGK VH +
Sbjct: 30 DRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLI 89
Query: 225 KSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPR---KDIVSWNAMISGYAQHGAGEK 281
+ + D+ SLIS+Y+K GD +A ++F + R +D+VSW+AM++ Y +G
Sbjct: 90 EFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELD 149
Query: 282 ALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLG 317
A+ +F E G+ P+ + AV+ AC+++ V +G
Sbjct: 150 AIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVG 185
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 426 bits (1095), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/575 (37%), Positives = 338/575 (58%), Gaps = 10/575 (1%)
Query: 4 KSTVTWNSILSAFAKKHGNFEQARQLFEKIPEP-NTVSYNIMLACHLHHFGVGSARAFFD 62
K +W ++++ + K +G F+ +L E + + V+YN M++ +++ A
Sbjct: 217 KDERSWTTMMTGYVK-NGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVR 275
Query: 63 RMEVK----DTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSW---SAMVSGYVACGD 115
RM D ++ ++I A GL+ + A + + S+ +++VS Y CG
Sbjct: 276 RMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGK 335
Query: 116 LDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVEN 175
D A F P + +++W A+++GY+ G + A+ +F+EM K +++W MI+G EN
Sbjct: 336 FDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAEN 395
Query: 176 GRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAG 235
G E+GLKLF M G +P + + + C+ L A G+Q H + K S +AG
Sbjct: 396 GFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAG 455
Query: 236 TSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMK 295
+LI+MYAKCG ++EA ++F +P D VSWNA+I+ QHG G +A+ +++EM G++
Sbjct: 456 NALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIR 515
Query: 296 PDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVD 355
PD IT + VL AC+HAGLVD G +YF+ M + I +HYA ++DLL R+G+ +A
Sbjct: 516 PDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAES 575
Query: 356 LIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNR 415
+I+S+PFKP I+ LL CR+H N++L AA L L P Y+ L+N++AA +
Sbjct: 576 VIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQ 635
Query: 416 WEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIHXXXXXXXXXXXX 475
WE VAR+R+ M++ V K SWIE+ ++VH F D HPE +++
Sbjct: 636 WEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRR 695
Query: 476 AGYVPDLEFALHDVGEE-LKEQLLLWHSEKLAIAYGLLKVPLGLPIRVFKNLRVCGDCHT 534
GYVPD F LHDV + KE +L HSEK+A+A+GL+K+P G IR+FKNLR CGDCH
Sbjct: 696 LGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHN 755
Query: 535 AIKYISAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
+++S + R+II+RD RFHHF++G CSC ++W
Sbjct: 756 FFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 118/430 (27%), Positives = 189/430 (43%), Gaps = 81/430 (18%)
Query: 10 NSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEV--K 67
N ++ + K ARQLF++I EP+ ++ M++ + + AR F++ V +
Sbjct: 53 NRLIDVYCKS-SELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMR 111
Query: 68 DTASWNTMISGYAQVGLMGEASMLFAVMP------------------------EKNCVSW 103
DT +N MI+G++ A LF M EK CV +
Sbjct: 112 DTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQF 171
Query: 104 ----------------SAMVSGYVACGD----LDAAVECFYAAPVRSVITWTAMITGYMK 143
+A+VS Y C L +A + F + +WT M+TGY+K
Sbjct: 172 HAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVK 231
Query: 144 FGRVESAERLFREMSLK-TLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTS 202
G + E L M LV +NAMI+GYV G ++ L++ + M+ SG + + + S
Sbjct: 232 NGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPS 291
Query: 203 VLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKD 262
V+ C+ LQLGKQVH V + S SL+S+Y KCG EA +F ++P KD
Sbjct: 292 VIRACATAGLLQLGKQVHAYVLRREDFS-FHFDNSLVSLYYKCGKFDEARAIFEKMPAKD 350
Query: 263 IVSWNAMISGY-------------------------------AQHGAGEKALHLFDEMRH 291
+VSWNA++SGY A++G GE+ L LF M+
Sbjct: 351 LVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKR 410
Query: 292 DGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLP 351
+G +P F + +C G G QY +++ G + ++ + + G +
Sbjct: 411 EGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLK-IGFDSSLSAGNALITMYAKCGVVE 469
Query: 352 EAVDLIKSMP 361
EA + ++MP
Sbjct: 470 EARQVFRTMP 479
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 145/306 (47%), Gaps = 24/306 (7%)
Query: 73 NTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPV--RS 130
N +I Y + + A LF + E + ++ + MVSGY A GD+ A F APV R
Sbjct: 53 NRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRD 112
Query: 131 VITWTAMITGYMKFGRVESAERLFREMSLKTL----VTWNAMIAGYVENGRAEDG-LKLF 185
+ + AMITG+ SA LF +M + T+ +++AG E ++
Sbjct: 113 TVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFH 172
Query: 186 KSMLESGA---KPNALSLTSVLLGC-SNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISM 241
+ L+SGA + +L SV C S+ S L ++V + L D + T++++
Sbjct: 173 AAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEI----LEKDERSWTTMMTG 228
Query: 242 YAKCGDLKEAWELFVQIPRK-DIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWIT 300
Y K G EL + +V++NAMISGY G ++AL + M G++ D T
Sbjct: 229 YVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFT 288
Query: 301 FVAVLLACNHAGLVDLGVQYFNMMVR--DFGIKTKPEHY-ACMVDLLGRAGRLPEAVDLI 357
+ +V+ AC AGL+ LG Q ++R DF H+ +V L + G+ EA +
Sbjct: 289 YPSVIRACATAGLLQLGKQVHAYVLRREDFSF-----HFDNSLVSLYYKCGKFDEARAIF 343
Query: 358 KSMPFK 363
+ MP K
Sbjct: 344 EKMPAK 349
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 66/121 (54%), Gaps = 6/121 (4%)
Query: 187 SMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCG 246
+++ G +P A L ++ S L +Q+ + + D A T+++S Y G
Sbjct: 39 NIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEP----DKIARTTMVSGYCASG 94
Query: 247 DLKEAWELFVQIP--RKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAV 304
D+ A +F + P +D V +NAMI+G++ + G A++LF +M+H+G KPD TF +V
Sbjct: 95 DITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASV 154
Query: 305 L 305
L
Sbjct: 155 L 155
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 426 bits (1094), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/553 (40%), Positives = 312/553 (56%), Gaps = 40/553 (7%)
Query: 57 ARAFFDRMEVKDTASWNTMISGYA-----QVGLMGEASMLFAVMPE---------KNCVS 102
A+ FD + DT WN MI G++ + L+ ML + P K C +
Sbjct: 68 AQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSN 127
Query: 103 WSA-------------------------MVSGYVACGDLDAAVECFYAAPVRSVITWTAM 137
SA +++ Y G+ A F P ++W ++
Sbjct: 128 LSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSV 187
Query: 138 ITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNA 197
I GY+K G+++ A LFR+M+ K ++W MI+GYV+ ++ L+LF M S +P+
Sbjct: 188 IKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDN 247
Query: 198 LSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQ 257
+SL + L C+ L AL+ GK +H + K+ + D+ G LI MYAKCG+++EA E+F
Sbjct: 248 VSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKN 307
Query: 258 IPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLG 317
I +K + +W A+ISGYA HG G +A+ F EM+ G+KP+ ITF AVL AC++ GLV+ G
Sbjct: 308 IKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEG 367
Query: 318 VQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACR 377
F M RD+ +K EHY C+VDLLGRAG L EA I+ MP KP+ I+G LL ACR
Sbjct: 368 KLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACR 427
Query: 378 IHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGY 437
IHKN++L E + L+ +DP YV AN++A +W+ A RR MKE V K PG
Sbjct: 428 IHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGC 487
Query: 438 SWIEISSEVHEFRSSDRLHPELASIHXXXXXXXXXXXXAGYVPDLEFALHD-VGEELKEQ 496
S I + HEF + DR HPE+ I GYVP+LE L D V ++ +E
Sbjct: 488 STISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREA 547
Query: 497 LLLWHSEKLAIAYGLLKVPLGLPIRVFKNLRVCGDCHTAIKYISAIEGREIIVRDTTRFH 556
++ HSEKLAI YGL+K G IR+ KNLRVC DCH K IS I R+I++RD TRFH
Sbjct: 548 IVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFH 607
Query: 557 HFKDGFCSCSDYW 569
HF+DG CSC DYW
Sbjct: 608 HFRDGKCSCGDYW 620
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 125/308 (40%), Gaps = 73/308 (23%)
Query: 10 NSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDT 69
NS+++++A GNF+ A LF++IPEP D
Sbjct: 154 NSLINSYAVT-GNFKLAHLLFDRIPEP-------------------------------DD 181
Query: 70 ASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPVR 129
SWN++I GY + G M A LF M EKN +SW+ M+SGYV A++ F+
Sbjct: 182 VSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNS 241
Query: 130 SV---------------------------------------ITWTAMITGYMKFGRVESA 150
V + +I Y K G +E A
Sbjct: 242 DVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEA 301
Query: 151 ERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNL 210
+F+ + K++ W A+I+GY +G + + F M + G KPN ++ T+VL CS
Sbjct: 302 LEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYT 361
Query: 211 SALQLGKQV-HQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK-DIVSWNA 268
++ GK + + + L ++ + + G L EA ++P K + V W A
Sbjct: 362 GLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGA 421
Query: 269 MISGYAQH 276
++ H
Sbjct: 422 LLKACRIH 429
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 425 bits (1092), Expect = e-119, Method: Compositional matrix adjust.
Identities = 211/468 (45%), Positives = 296/468 (63%), Gaps = 2/468 (0%)
Query: 104 SAMVSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLV 163
+ +V Y GD+ +A + F P RS+++ TAMIT Y K G VE+A LF M + +V
Sbjct: 165 TGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIV 224
Query: 164 TWNAMIAGYVENGRAEDGLKLFKSMLESGA-KPNALSLTSVLLGCSNLSALQLGKQVHQL 222
+WN MI GY ++G D L LF+ +L G KP+ +++ + L CS + AL+ G+ +H
Sbjct: 225 SWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVF 284
Query: 223 VCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKA 282
V S + + T LI MY+KCG L+EA +F PRKDIV+WNAMI+GYA HG + A
Sbjct: 285 VKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDA 344
Query: 283 LHLFDEMRH-DGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMV 341
L LF+EM+ G++P ITF+ L AC HAGLV+ G++ F M +++GIK K EHY C+V
Sbjct: 345 LRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLV 404
Query: 342 DLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSAT 401
LLGRAG+L A + IK+M ++ ++LG+C++H + L + A+ L+ L+ ++
Sbjct: 405 SLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSG 464
Query: 402 GYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELAS 461
YV L+N+YA+ +E VA++R MKE +VK PG S IEI ++VHEFR+ DR H +
Sbjct: 465 IYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKE 524
Query: 462 IHXXXXXXXXXXXXAGYVPDLEFALHDVGEELKEQLLLWHSEKLAIAYGLLKVPLGLPIR 521
I+ GYVP+ L D+ E KEQ L HSE+LAIAYGL+ G P++
Sbjct: 525 IYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLK 584
Query: 522 VFKNLRVCGDCHTAIKYISAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
+FKNLRVC DCHT K IS I GR+I++RD RFHHF DG CSC D+W
Sbjct: 585 IFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 137/271 (50%), Gaps = 12/271 (4%)
Query: 19 KHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISG 78
K G+ A+++F+++PE + VS M+ C+ V +ARA FD M +D SWN MI G
Sbjct: 173 KGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDG 232
Query: 79 YAQVGLMGEASMLFAVM-----PEKNCVSWSAMVSGYVACGDLDAA--VECFY-AAPVR- 129
YAQ G +A MLF + P+ + ++ A +S G L+ + F ++ +R
Sbjct: 233 YAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRL 292
Query: 130 SVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSML 189
+V T +I Y K G +E A +F + K +V WNAMIAGY +G ++D L+LF M
Sbjct: 293 NVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQ 352
Query: 190 E-SGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKS-PLSSDTTAGTSLISMYAKCGD 247
+G +P ++ L C++ + G ++ + + + + L+S+ + G
Sbjct: 353 GITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQ 412
Query: 248 LKEAWELFVQIPRK-DIVSWNAMISGYAQHG 277
LK A+E + D V W++++ HG
Sbjct: 413 LKRAYETIKNMNMDADSVLWSSVLGSCKLHG 443
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 115/255 (45%), Gaps = 37/255 (14%)
Query: 141 YMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSL 200
Y G++ + LF + L + A I NG + L+ +L S PN +
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTF 133
Query: 201 TSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIP- 259
+S+L CS S GK +H V K L D T L+ +YAK GD+ A ++F ++P
Sbjct: 134 SSLLKSCSTKS----GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPE 189
Query: 260 ------------------------------RKDIVSWNAMISGYAQHGAGEKALHLFDEM 289
+DIVSWN MI GYAQHG AL LF ++
Sbjct: 190 RSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKL 249
Query: 290 RHDGM-KPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAG 348
+G KPD IT VA L AC+ G ++ G ++ ++ V+ I+ + ++D+ + G
Sbjct: 250 LAEGKPKPDEITVVAALSACSQIGALETG-RWIHVFVKSSRIRLNVKVCTGLIDMYSKCG 308
Query: 349 RLPEAVDLIKSMPFK 363
L EAV + P K
Sbjct: 309 SLEEAVLVFNDTPRK 323
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 423 bits (1088), Expect = e-118, Method: Compositional matrix adjust.
Identities = 232/576 (40%), Positives = 334/576 (57%), Gaps = 23/576 (3%)
Query: 10 NSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDT 69
S++S + + +G E A ++F+K P + VSY ++ + + +A+ FD + VKD
Sbjct: 173 TSLISMYVQ-NGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDV 231
Query: 70 ASWNTMISGYAQVGLMGEASMLFAVMPEKNC-VSWSAMVSGYVACGDLDAAVECFYAAPV 128
SWN MISGYA+ G EA LF M + N S MV+ AC ++E
Sbjct: 232 VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ-SGSIELG----- 285
Query: 129 RSVITW-------------TAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVEN 175
R V W A+I Y K G +E+A LF + K +++WN +I GY
Sbjct: 286 RQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHM 345
Query: 176 GRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCK--SPLSSDTT 233
++ L LF+ ML SG PN +++ S+L C++L A+ +G+ +H + K +++ ++
Sbjct: 346 NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASS 405
Query: 234 AGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDG 293
TSLI MYAKCGD++ A ++F I K + SWNAMI G+A HG + + LF MR G
Sbjct: 406 LRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIG 465
Query: 294 MKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEA 353
++PD ITFV +L AC+H+G++DLG F M +D+ + K EHY CM+DLLG +G EA
Sbjct: 466 IQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEA 525
Query: 354 VDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQ 413
++I M +P I+ +LL AC++H N++L E A+NL++++P + YV L+N+YA+
Sbjct: 526 EEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASA 585
Query: 414 NRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIHXXXXXXXXXX 473
RW VA+ R + + + K PG S IEI S VHEF D+ HP I+
Sbjct: 586 GRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLL 645
Query: 474 XXAGYVPDLEFALHDVGEELKEQLLLWHSEKLAIAYGLLKVPLGLPIRVFKNLRVCGDCH 533
AG+VPD L ++ EE KE L HSEKLAIA+GL+ G + + KNLRVC +CH
Sbjct: 646 EKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCH 705
Query: 534 TAIKYISAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
A K IS I REII RD TRFHHF+DG CSC+DYW
Sbjct: 706 EATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 190/348 (54%), Gaps = 11/348 (3%)
Query: 26 ARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRM----EVKDTASWNTMISGYAQ 81
A +F+ I EPN + +N M H SA + M + ++ ++ ++ A+
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 82 VGLMGEASMLFAVMPEKNC----VSWSAMVSGYVACGDLDAAVECFYAAPVRSVITWTAM 137
E + + + C ++++S YV G L+ A + F +P R V+++TA+
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTAL 206
Query: 138 ITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNA 197
I GY G +E+A++LF E+ +K +V+WNAMI+GY E G ++ L+LFK M+++ +P+
Sbjct: 207 IKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDE 266
Query: 198 LSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQ 257
++ +V+ C+ +++LG+QVH + S+ +LI +Y+KCG+L+ A LF +
Sbjct: 267 STMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFER 326
Query: 258 IPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLG 317
+P KD++SWN +I GY ++AL LF EM G P+ +T +++L AC H G +D+G
Sbjct: 327 LPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG 386
Query: 318 VQYFNMMV--RDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFK 363
++ ++ + R G+ ++D+ + G + A + S+ K
Sbjct: 387 -RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHK 433
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 421 bits (1083), Expect = e-118, Method: Compositional matrix adjust.
Identities = 208/533 (39%), Positives = 304/533 (57%), Gaps = 38/533 (7%)
Query: 73 NTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECF--------- 123
N +I+ Y + L+ +A LF MP++N +SW+ M+S Y C A+E
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159
Query: 124 -----YAAPVRS----------------------VITWTAMITGYMKFGRVESAERLFRE 156
Y++ +RS V +A+I + K G E A +F E
Sbjct: 160 PNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDE 219
Query: 157 MSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLG 216
M + WN++I G+ +N R++ L+LFK M +G +LTSVL C+ L+ L+LG
Sbjct: 220 MVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG 279
Query: 217 KQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQH 276
Q H + K D +L+ MY KCG L++A +F Q+ +D+++W+ MISG AQ+
Sbjct: 280 MQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQN 337
Query: 277 GAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEH 336
G ++AL LF+ M+ G KP++IT V VL AC+HAGL++ G YF M + +GI EH
Sbjct: 338 GYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREH 397
Query: 337 YACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELD 396
Y CM+DLLG+AG+L +AV L+ M +P + TLLGACR+ +N+ LAE+AAK ++ LD
Sbjct: 398 YGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALD 457
Query: 397 PSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLH 456
P A Y L+N+YA +W+ V IR M++ + K PG SWIE++ ++H F D H
Sbjct: 458 PEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSH 517
Query: 457 PELASIHXXXXXXXXXXXXAGYVPDLEFALHDVGEELKEQLLLWHSEKLAIAYGLLKVPL 516
P++ + GYVP+ F L D+ E E L HSEKLA+A+GL+ +P+
Sbjct: 518 PQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPI 577
Query: 517 GLPIRVFKNLRVCGDCHTAIKYISAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
IR+ KNLR+CGDCH K S +E R I++RD R+HHF+DG CSC DYW
Sbjct: 578 EKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 140/317 (44%), Gaps = 51/317 (16%)
Query: 1 MKVKSTVTWNSILSAFAK---KHGNFEQARQLFEKIPEPNTVSYNI------------ML 45
M ++ ++W +++SA++K E + PN +Y+ ML
Sbjct: 122 MPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRML 181
Query: 46 ACHLHHFGVGS--------------------ARAFFDRMEVKDTASWNTMISGYAQVGLM 85
C + G+ S A + FD M D WN++I G+AQ
Sbjct: 182 HCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRS 241
Query: 86 GEASMLFAVMPEKNCVSWSAMVSGYV-ACGDLDAAVECFYAAPV------RSVITWTAMI 138
A LF M ++ A ++ + AC L A +E A V + +I A++
Sbjct: 242 DVALELFKRMKRAGFIAEQATLTSVLRACTGL-ALLELGMQAHVHIVKYDQDLILNNALV 300
Query: 139 TGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNAL 198
Y K G +E A R+F +M + ++TW+ MI+G +NG +++ LKLF+ M SG KPN +
Sbjct: 301 DMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYI 360
Query: 199 SLTSVLLGCSNLSALQLG----KQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWEL 254
++ VL CS+ L+ G + + +L P+ +I + K G L +A +L
Sbjct: 361 TIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGC---MIDLLGKAGKLDDAVKL 417
Query: 255 FVQIP-RKDIVSWNAMI 270
++ D V+W ++
Sbjct: 418 LNEMECEPDAVTWRTLL 434
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 421 bits (1081), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/591 (37%), Positives = 328/591 (55%), Gaps = 44/591 (7%)
Query: 23 FEQARQLFEKIPE----PNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISG 78
E+ +++ E I P V +N +L + + AR FD M +D SWN M++G
Sbjct: 101 LEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNG 160
Query: 79 YAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAV------------------ 120
YA+VGL+ EA LF M EK+ SW+AMV+GYV + A+
Sbjct: 161 YAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFT 220
Query: 121 -----------ECF------YAAPVRS-----VITWTAMITGYMKFGRVESAERLFREMS 158
+C + VR+ + W++++ Y K G ++ A +F ++
Sbjct: 221 VSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIV 280
Query: 159 LKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQ 218
K +V+W +MI Y ++ R +G LF ++ S +PN + VL C++L+ +LGKQ
Sbjct: 281 EKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQ 340
Query: 219 VHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGA 278
VH + + + A +SL+ MY KCG+++ A + P+ D+VSW ++I G AQ+G
Sbjct: 341 VHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQ 400
Query: 279 GEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYA 338
++AL FD + G KPD +TFV VL AC HAGLV+ G+++F + + +HY
Sbjct: 401 PDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYT 460
Query: 339 CMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPS 398
C+VDLL R+GR + +I MP KP ++ ++LG C + N+DLAE AA+ L +++P
Sbjct: 461 CLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPE 520
Query: 399 SATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPE 458
+ YV +AN+YAA +WE ++R+ M+E V K PG SW EI + H F ++D HP
Sbjct: 521 NPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPM 580
Query: 459 LASIHXXXXXXXXXXXXAGYVPDLEFALHDVGEELKEQLLLWHSEKLAIAYGLLKVPLGL 518
I GYVP LHDV +E KE+ L++HSEKLA+A+ +L G
Sbjct: 581 YNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGT 640
Query: 519 PIRVFKNLRVCGDCHTAIKYISAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
I+VFKNLR C DCH AIK+IS I R+I VRD+TRFH F++G CSC DYW
Sbjct: 641 AIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 65/112 (58%), Gaps = 3/112 (2%)
Query: 181 GLKLFK---SMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTS 237
G KL + +L KP A + +++ CS AL+ GK+VH+ + S
Sbjct: 66 GQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNR 125
Query: 238 LISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEM 289
L+ MYAKCG L +A ++F ++P +D+ SWN M++GYA+ G E+A LFDEM
Sbjct: 126 LLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEM 177
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 419 bits (1077), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/579 (37%), Positives = 327/579 (56%), Gaps = 13/579 (2%)
Query: 3 VKSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPN----TVSYNIMLACHLHHFGVGSAR 58
V + T+ SIL + G+ E Q+ +I + N ++++ + + +A
Sbjct: 487 VPNQYTYPSILKT-CIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAW 545
Query: 59 AFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYV-ACGDLD 117
R KD SW TMI+GY Q +A F M ++ S ++ V AC L
Sbjct: 546 DILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQ 605
Query: 118 AAVEC--FYAAPVRSVIT-----WTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIA 170
A E +A S + A++T Y + G++E + F + + WNA+++
Sbjct: 606 ALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVS 665
Query: 171 GYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSS 230
G+ ++G E+ L++F M G N + S + S + ++ GKQVH ++ K+ S
Sbjct: 666 GFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDS 725
Query: 231 DTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMR 290
+T +LISMYAKCG + +A + F+++ K+ VSWNA+I+ Y++HG G +AL FD+M
Sbjct: 726 ETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMI 785
Query: 291 HDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRL 350
H ++P+ +T V VL AC+H GLVD G+ YF M ++G+ KPEHY C+VD+L RAG L
Sbjct: 786 HSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLL 845
Query: 351 PEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVY 410
A + I+ MP KP ++ TLL AC +HKN+++ EFAA +LLEL+P + YV L+N+Y
Sbjct: 846 SRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLY 905
Query: 411 AAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIHXXXXXXX 470
A +W+ R+ MKE V K PG SWIE+ + +H F D+ HP IH
Sbjct: 906 AVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLT 965
Query: 471 XXXXXAGYVPDLEFALHDVGEELKEQLLLWHSEKLAIAYGLLKVPLGLPIRVFKNLRVCG 530
GYV D L+++ E K+ ++ HSEKLAI++GLL +P +PI V KNLRVC
Sbjct: 966 KRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCN 1025
Query: 531 DCHTAIKYISAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
DCH IK++S + REIIVRD RFHHF+ G CSC DYW
Sbjct: 1026 DCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 172/363 (47%), Gaps = 16/363 (4%)
Query: 6 TVTWNSILSAFAKKHGNFEQARQLFEKIP----EPNTVSYNIMLACHLHHFGVGSARAFF 61
T+ W +L K +G+ ++ R+L +I + N + +L + A F
Sbjct: 86 TLKW--LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVF 143
Query: 62 DRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYV-ACGDLDAAV 120
D M + +WN MI A L+GE LF M +N SG + AC A
Sbjct: 144 DEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAF 203
Query: 121 EC--------FYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGY 172
+ Y S + +I Y + G V+ A R+F + LK +W AMI+G
Sbjct: 204 DVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGL 263
Query: 173 VENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDT 232
+N + ++LF M G P + +SVL C + +L++G+Q+H LV K SSDT
Sbjct: 264 SKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDT 323
Query: 233 TAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHD 292
+L+S+Y G+L A +F + ++D V++N +I+G +Q G GEKA+ LF M D
Sbjct: 324 YVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLD 383
Query: 293 GMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPE 352
G++PD T ++++AC+ G + G Q + G + + +++L + +
Sbjct: 384 GLEPDSNTLASLVVACSADGTLFRG-QQLHAYTTKLGFASNNKIEGALLNLYAKCADIET 442
Query: 353 AVD 355
A+D
Sbjct: 443 ALD 445
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 179/349 (51%), Gaps = 26/349 (7%)
Query: 25 QARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGL 84
AR L++ + + +TV N ++ + + V AR FD + +KD +SW MISG ++
Sbjct: 210 HARILYQGLRD-STVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNEC 268
Query: 85 MGEASMLF------AVMPEKNCVSWSAMVSGYVACGDLDAAV--ECFYAAPVR-----SV 131
EA LF +MP ++S+++S AC +++ E + ++
Sbjct: 269 EAEAIRLFCDMYVLGIMPTP--YAFSSVLS---ACKKIESLEIGEQLHGLVLKLGFSSDT 323
Query: 132 ITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLES 191
A+++ Y G + SAE +F MS + VT+N +I G + G E ++LFK M
Sbjct: 324 YVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLD 383
Query: 192 GAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEA 251
G +P++ +L S+++ CS L G+Q+H K +S+ +L+++YAKC D++ A
Sbjct: 384 GLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETA 443
Query: 252 WELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHA 311
+ F++ +++V WN M+ Y + +F +M+ + + P+ T+ ++L C
Sbjct: 444 LDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRL 503
Query: 312 GLVDLGVQYFNMMVR-DFGIKTKPEHYAC--MVDLLGRAGRLPEAVDLI 357
G ++LG Q + +++ +F + Y C ++D+ + G+L A D++
Sbjct: 504 GDLELGEQIHSQIIKTNFQLNA----YVCSVLIDMYAKLGKLDTAWDIL 548
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 165/366 (45%), Gaps = 32/366 (8%)
Query: 9 WNSILSAFAKKHGNFEQARQLFEKIPE----PNTVSYNIMLACHLHHFGVGSARAFFDRM 64
++S+LSA KK + E QL + + +T N +++ + H + SA F M
Sbjct: 291 FSSVLSA-CKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNM 349
Query: 65 EVKDTASWNTMISGYAQVGLMGEASMLFAVM------PEKNCVSWSAMVSGYVACGDLDA 118
+D ++NT+I+G +Q G +A LF M P+ N + S VAC A
Sbjct: 350 SQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSN-----TLASLVVACS---A 401
Query: 119 AVECFYAAPVRSVITWT----------AMITGYMKFGRVESAERLFREMSLKTLVTWNAM 168
F + + T A++ Y K +E+A F E ++ +V WN M
Sbjct: 402 DGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVM 461
Query: 169 IAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPL 228
+ Y + ++F+ M PN + S+L C L L+LG+Q+H + K+
Sbjct: 462 LVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNF 521
Query: 229 SSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDE 288
+ + LI MYAK G L AW++ ++ KD+VSW MI+GY Q+ +KAL F +
Sbjct: 522 QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQ 581
Query: 289 MRHDGMKPDWITFVAVLLACNHAGLVDLGV-QYFNMMVRDFGIKTKPEHYACMVDLLGRA 347
M G++ D + + AC AGL L Q + G + +V L R
Sbjct: 582 MLDRGIRSDEVGLTNAVSAC--AGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRC 639
Query: 348 GRLPEA 353
G++ E+
Sbjct: 640 GKIEES 645
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 417 bits (1072), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/618 (36%), Positives = 340/618 (55%), Gaps = 57/618 (9%)
Query: 4 KSTVTWNSILSAFAKKHGNFEQARQLFEKI------PEPNTVSYNIMLACHLHHFGVG-- 55
K +VT+N++++ + +K G + ++ LF K+ P T S + LH F +G
Sbjct: 213 KDSVTFNTLITGY-EKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQ 271
Query: 56 ----SARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYV 111
S F R D + N ++ Y++ + E MLF MPE + VS++ ++S Y
Sbjct: 272 LHALSVTTGFSR----DASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYS 327
Query: 112 ACGDLDAAVECFYAA----------PVRSVITWTA------------------------- 136
+A++ F P ++++ A
Sbjct: 328 QADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILH 387
Query: 137 ----MITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESG 192
++ Y K E AE +F+ + +T V+W A+I+GYV+ G GLKLF M S
Sbjct: 388 VGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSN 447
Query: 193 AKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAW 252
+ + + +VL ++ ++L LGKQ+H + +S + +G+ L+ MYAKCG +K+A
Sbjct: 448 LRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAV 507
Query: 253 ELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAG 312
++F ++P ++ VSWNA+IS +A +G GE A+ F +M G++PD ++ + VL AC+H G
Sbjct: 508 QVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCG 567
Query: 313 LVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTL 372
V+ G +YF M +GI K +HYACM+DLLGR GR EA L+ MPF+P ++ ++
Sbjct: 568 FVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSV 627
Query: 373 LGACRIHKNLDLAEFAAKNLLELDP-SSATGYVQLANVYAAQNRWEHVARIRRSMKENKV 431
L ACRIHKN LAE AA+ L ++ A YV ++N+YAA WE V ++++M+E +
Sbjct: 628 LNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGI 687
Query: 432 VKAPGYSWIEISSEVHEFRSSDRLHPELASIHXXXXXXXXXXXXAGYVPDLEFALHDVGE 491
K P YSW+E++ ++H F S+D+ HP I GY PD + DV E
Sbjct: 688 KKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDE 747
Query: 492 ELKEQLLLWHSEKLAIAYGLLKVPLGLPIRVFKNLRVCGDCHTAIKYISAIEGREIIVRD 551
++K + L +HSE+LA+A+ L+ P G PI V KNLR C DCH AIK IS I REI VRD
Sbjct: 748 QMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRD 807
Query: 552 TTRFHHFKDGFCSCSDYW 569
T+RFHHF +G CSC DYW
Sbjct: 808 TSRFHHFSEGVCSCGDYW 825
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 162/360 (45%), Gaps = 23/360 (6%)
Query: 19 KHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISG 78
+ G AR++++++P NTVS N M++ H+ V SAR FD M + +W ++
Sbjct: 60 RRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGW 119
Query: 79 YAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVA-------CGDL--DAAVECFYAAPVR 129
YA+ EA LF M C S S + +V C D AV +A V+
Sbjct: 120 YARNSHFDEAFKLFRQM----CRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVK 175
Query: 130 -------SVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGL 182
+ ++ Y + R++ A LF E+ K VT+N +I GY ++G + +
Sbjct: 176 LGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESI 235
Query: 183 KLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMY 242
LF M +SG +P+ + + VL L LG+Q+H L + S D + G ++ Y
Sbjct: 236 HLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFY 295
Query: 243 AKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFV 302
+K + E LF ++P D VS+N +IS Y+Q E +LH F EM+ G F
Sbjct: 296 SKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFA 355
Query: 303 AVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYA-CMVDLLGRAGRLPEAVDLIKSMP 361
+L + + +G Q + H +VD+ + EA + KS+P
Sbjct: 356 TMLSIAANLSSLQMGRQLHCQAL--LATADSILHVGNSLVDMYAKCEMFEEAELIFKSLP 413
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 136/303 (44%), Gaps = 46/303 (15%)
Query: 68 DTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAP 127
DT N ++ + G + A ++ MP KN VS + M+SG+V GD+ +A + F A P
Sbjct: 47 DTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMP 106
Query: 128 VRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKS 187
R+V+TWT ++ Y + + A +LFR+M + T
Sbjct: 107 DRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTL---------------------- 144
Query: 188 MLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDT--TAGTSLISMYAKC 245
P+ ++ T++L GC++ QVH K ++ T L+ Y +
Sbjct: 145 -------PDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEV 197
Query: 246 GDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVL 305
L A LF +IP KD V++N +I+GY + G +++HLF +MR G +P TF VL
Sbjct: 198 RRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVL 257
Query: 306 LACNHAGLVD--LGVQYFNMMV-----RDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIK 358
A GL D LG Q + V RD + + ++D + R+ E L
Sbjct: 258 KAV--VGLHDFALGQQLHALSVTTGFSRDASVGNQ------ILDFYSKHDRVLETRMLFD 309
Query: 359 SMP 361
MP
Sbjct: 310 EMP 312
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 415 bits (1067), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/559 (38%), Positives = 325/559 (58%), Gaps = 10/559 (1%)
Query: 21 GNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDT-ASWNTMI--- 76
G+ + A ++F I E + VS+N M+ + A F +ME +D AS TM+
Sbjct: 180 GDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVL 239
Query: 77 SGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSGYVACGDLDAAVECFYAAPVRSVI 132
S A++ + + + + E N +AM+ Y CG ++ A F A + +
Sbjct: 240 SACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNV 299
Query: 133 TWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSM-LES 191
TWT M+ GY E+A + M K +V WNA+I+ Y +NG+ + L +F + L+
Sbjct: 300 TWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQK 359
Query: 192 GAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEA 251
K N ++L S L C+ + AL+LG+ +H + K + + ++LI MY+KCGDL+++
Sbjct: 360 NMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKS 419
Query: 252 WELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHA 311
E+F + ++D+ W+AMI G A HG G +A+ +F +M+ +KP+ +TF V AC+H
Sbjct: 420 REVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHT 479
Query: 312 GLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGT 371
GLVD F+ M ++GI + +HYAC+VD+LGR+G L +AV I++MP P +++G
Sbjct: 480 GLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGA 539
Query: 372 LLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKV 431
LLGAC+IH NL+LAE A LLEL+P + +V L+N+YA +WE+V+ +R+ M+ +
Sbjct: 540 LLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGL 599
Query: 432 VKAPGYSWIEISSEVHEFRSSDRLHPELASIHXXXXXXXXXXXXAGYVPDLEFALHDV-G 490
K PG S IEI +HEF S D HP ++ GY P++ L +
Sbjct: 600 KKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEE 659
Query: 491 EELKEQLLLWHSEKLAIAYGLLKVPLGLPIRVFKNLRVCGDCHTAIKYISAIEGREIIVR 550
EE+KEQ L HSEKLAI YGL+ IRV KNLRVCGDCH+ K IS + REIIVR
Sbjct: 660 EEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVR 719
Query: 551 DTTRFHHFKDGFCSCSDYW 569
D RFHHF++G CSC+D+W
Sbjct: 720 DRYRFHHFRNGQCSCNDFW 738
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 140/297 (47%), Gaps = 14/297 (4%)
Query: 144 FGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSML-ESGAKPNALSLTS 202
F +E A ++F E+ WN +I Y + F M+ ES PN +
Sbjct: 77 FASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPF 136
Query: 203 VLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKD 262
++ + +S+L LG+ +H + KS + SD SLI Y CGDL A ++F I KD
Sbjct: 137 LIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKD 196
Query: 263 IVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFN 322
+VSWN+MI+G+ Q G+ +KAL LF +M + +K +T V VL AC ++ G Q +
Sbjct: 197 VVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCS 256
Query: 323 MMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNL 382
+ + + M+D+ + G + +A L +M K + + T+L I ++
Sbjct: 257 -YIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDN-VTWTTMLDGYAISEDY 314
Query: 383 DLAEFAAKNLLELDPS-SATGYVQLANVYAAQNRWE------HVARIRRSMKENKVV 432
+ AA+ +L P + L + Y + H +++++MK N++
Sbjct: 315 E----AAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQIT 367
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 414 bits (1064), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/519 (41%), Positives = 308/519 (59%), Gaps = 10/519 (1%)
Query: 61 FDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMP----EKNCVSWSAMVSGYVACGDL 116
FDRM V+D SWN++I Y A LF M + +C++ ++ S GD+
Sbjct: 305 FDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDI 364
Query: 117 DA--AVECFYAAP---VRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAG 171
A +V+ F + + A++ Y K G V+SA +F + +++WN +I+G
Sbjct: 365 RACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISG 424
Query: 172 YVENGRAEDGLKLFKSMLESGA-KPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSS 230
Y +NG A + ++++ M E G N + SVL CS AL+ G ++H + K+ L
Sbjct: 425 YAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYL 484
Query: 231 DTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMR 290
D TSL MY KCG L++A LF QIPR + V WN +I+ + HG GEKA+ LF EM
Sbjct: 485 DVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEML 544
Query: 291 HDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRL 350
+G+KPD ITFV +L AC+H+GLVD G F MM D+GI +HY CMVD+ GRAG+L
Sbjct: 545 DEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQL 604
Query: 351 PEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVY 410
A+ IKSM +P +I+G LL ACR+H N+DL + A+++L E++P +V L+N+Y
Sbjct: 605 ETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMY 664
Query: 411 AAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIHXXXXXXX 470
A+ +WE V IR + K PG+S +E+ ++V F + ++ HP ++
Sbjct: 665 ASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQ 724
Query: 471 XXXXXAGYVPDLEFALHDVGEELKEQLLLWHSEKLAIAYGLLKVPLGLPIRVFKNLRVCG 530
GYVPD F L DV ++ KE +L+ HSE+LAIA+ L+ P IR+FKNLRVCG
Sbjct: 725 AKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCG 784
Query: 531 DCHTAIKYISAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
DCH+ K+IS I REIIVRD+ RFHHFK+G CSC DYW
Sbjct: 785 DCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 187/366 (51%), Gaps = 15/366 (4%)
Query: 41 YNIMLACHLHHF-----GVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVM 95
+++ +A L H VG+AR FD M V+D SWN MISGY Q G EA L +
Sbjct: 183 WDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGL 242
Query: 96 PEKNCVSWSAMVSGYVACGDLDAAVECFYAAPVR-----SVITWTAMITGYMKFGRVESA 150
+ V+ +++S GD + V ++ ++ + +I Y +FGR+
Sbjct: 243 RAMDSVTVVSLLSACTEAGDFNRGVT-IHSYSIKHGLESELFVSNKLIDLYAEFGRLRDC 301
Query: 151 ERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNL 210
+++F M ++ L++WN++I Y N + + LF+ M S +P+ L+L S+ S L
Sbjct: 302 QKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQL 361
Query: 211 SALQLGKQVHQLVC-KSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAM 269
++ + V K D T G +++ MYAK G + A +F +P D++SWN +
Sbjct: 362 GDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTI 421
Query: 270 ISGYAQHGAGEKALHLFDEMRHDG-MKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDF 328
ISGYAQ+G +A+ +++ M +G + + T+V+VL AC+ AG + G++ ++++
Sbjct: 422 ISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN- 480
Query: 329 GIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFA 388
G+ + D+ G+ GRL +A+ L +P + + + TL+ H + + A
Sbjct: 481 GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIACHGFHGHGEKAVML 539
Query: 389 AKNLLE 394
K +L+
Sbjct: 540 FKEMLD 545
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 136/268 (50%), Gaps = 12/268 (4%)
Query: 43 IMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVS 102
+ L C+L + V AR FD ++ +D +WN MISGY + G E F++ + ++
Sbjct: 93 VNLYCYLGN--VALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLT 150
Query: 103 --WSAMVSGYVACGDL--DAAVECFYA--APVRSVITWTAMITGYMKFGRVESAERLFRE 156
+ S AC + + C + V ++I Y ++ V +A LF E
Sbjct: 151 PDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDE 210
Query: 157 MSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLG 216
M ++ + +WNAMI+GY ++G A++ L L + +++++ S+L C+ G
Sbjct: 211 MPVRDMGSWNAMISGYCQSGNAKEALTLSNGL----RAMDSVTVVSLLSACTEAGDFNRG 266
Query: 217 KQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQH 276
+H K L S+ LI +YA+ G L++ ++F ++ +D++SWN++I Y +
Sbjct: 267 VTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELN 326
Query: 277 GAGEKALHLFDEMRHDGMKPDWITFVAV 304
+A+ LF EMR ++PD +T +++
Sbjct: 327 EQPLRAISLFQEMRLSRIQPDCLTLISL 354
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 123/254 (48%), Gaps = 15/254 (5%)
Query: 113 CGDLDAAVECFYA-----APVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNA 167
C +L +A +C +A +++V ++ Y G V A F + + + WN
Sbjct: 64 CTNLQSA-KCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNL 122
Query: 168 MIAGYVENGRAEDGLKLFK-SMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKS 226
MI+GY G + + ++ F ML SG P+ + SVL C + G ++H L K
Sbjct: 123 MISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKF 179
Query: 227 PLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLF 286
D SLI +Y++ + A LF ++P +D+ SWNAMISGY Q G ++AL L
Sbjct: 180 GFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLS 239
Query: 287 DEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGR 346
+ +R D +T V++L AC AG + GV + ++ G++++ ++DL
Sbjct: 240 NGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKH-GLESELFVSNKLIDLYAE 294
Query: 347 AGRLPEAVDLIKSM 360
GRL + + M
Sbjct: 295 FGRLRDCQKVFDRM 308
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/413 (25%), Positives = 168/413 (40%), Gaps = 94/413 (22%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIP----EPNTVSYNIMLACHLHHFG--- 53
M V+ ++WNSI+ A+ +A LF+++ +P+ ++ I LA L G
Sbjct: 308 MYVRDLISWNSIIKAYELNEQPL-RAISLFQEMRLSRIQPDCLTL-ISLASILSQLGDIR 365
Query: 54 ----------------------------------VGSARAFFDRMEVKDTASWNTMISGY 79
V SARA F+ + D SWNT+ISGY
Sbjct: 366 ACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGY 425
Query: 80 AQVGLMGEASMLFAVMPEK-----NCVSWSAMVSGYVACGDLDAAVE----CFYAAPVRS 130
AQ G EA ++ +M E+ N +W +++ G L ++
Sbjct: 426 AQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLD 485
Query: 131 VITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLE 190
V T++ Y K GR+E A LF ++ V WN +IA + +G E + LFK ML+
Sbjct: 486 VFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLD 545
Query: 191 SGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKE 250
G KP+ ++ ++L CS+ + G+ C + +D Y LK
Sbjct: 546 EGVKPDHITFVTLLSACSHSGLVDEGQW-----CFEMMQTD----------YGITPSLKH 590
Query: 251 AWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNH 310
+ M+ Y + G E AL M ++PD + A+L AC
Sbjct: 591 ---------------YGCMVDMYGRAGQLETALKFIKSM---SLQPDASIWGALLSACRV 632
Query: 311 AGLVDLGVQYFNMMVRDFGIKTKPEH---YACMVDLLGRAGRLPEAVDLIKSM 360
G VDLG + + + +PEH + + ++ AG+ E VD I+S+
Sbjct: 633 HGNVDLG-----KIASEHLFEVEPEHVGYHVLLSNMYASAGKW-EGVDEIRSI 679
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 8/172 (4%)
Query: 207 CSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSW 266
C+NL Q K +H + S + L+++Y G++ A F I +D+ +W
Sbjct: 64 CTNL---QSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAW 120
Query: 267 NAMISGYAQHGAGEKALHLFDE-MRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMV 325
N MISGY + G + + F M G+ PD+ TF +VL AC + + +
Sbjct: 121 NLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTV----IDGNKIHCLA 176
Query: 326 RDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACR 377
FG A ++ L R + A L MP + + + G C+
Sbjct: 177 LKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQ 228
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 412 bits (1060), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/565 (38%), Positives = 322/565 (56%), Gaps = 9/565 (1%)
Query: 14 SAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVK----DT 69
S F K A +F +I PN +N+++ C A F+ +M D
Sbjct: 58 STFNKPTNLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDN 117
Query: 70 ASWNTMISGYAQVG--LMGEA--SMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYA 125
++ +I +++ L+GE S + + + +++V Y CG + AA F
Sbjct: 118 ITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQ 177
Query: 126 APVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLF 185
R V++WT+M+ GY K G VE+A +F EM + L TW+ MI GY +N E + LF
Sbjct: 178 MGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLF 237
Query: 186 KSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKC 245
+ M G N + SV+ C++L AL+ G++ ++ V KS ++ + GT+L+ M+ +C
Sbjct: 238 EFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRC 297
Query: 246 GDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVL 305
GD+++A +F +P D +SW+++I G A HG KA+H F +M G P +TF AVL
Sbjct: 298 GDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVL 357
Query: 306 LACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPH 365
AC+H GLV+ G++ + M +D GI+ + EHY C+VD+LGRAG+L EA + I M KP+
Sbjct: 358 SACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPN 417
Query: 366 PAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRS 425
I G LLGAC+I+KN ++AE L+++ P + YV L+N+YA +W+ + +R
Sbjct: 418 APILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDM 477
Query: 426 MKENKVVKAPGYSWIEISSEVHEFR-SSDRLHPELASIHXXXXXXXXXXXXAGYVPDLEF 484
MKE V K PG+S IEI ++++F D+ HPE+ I GY +
Sbjct: 478 MKEKLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGD 537
Query: 485 ALHDVGEELKEQLLLWHSEKLAIAYGLLKVPLGLPIRVFKNLRVCGDCHTAIKYISAIEG 544
A DV EE KE + HSEKLAIAYG++K G IR+ KNLRVC DCHT K IS + G
Sbjct: 538 AFFDVDEEEKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYG 597
Query: 545 REIIVRDTTRFHHFKDGFCSCSDYW 569
RE+IVRD RFHHF++G CSC DYW
Sbjct: 598 RELIVRDRNRFHHFRNGVCSCRDYW 622
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 412 bits (1059), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/584 (37%), Positives = 336/584 (57%), Gaps = 35/584 (5%)
Query: 5 STVTWNSILSAFAKKHG----NFEQARQL---FEKIPEPNTVSYNIMLACHLHHFGVGSA 57
S++T + AF+ +HG + E + L +P P +SY A
Sbjct: 28 SSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSY---------------A 72
Query: 58 RAFFDRMEVK-DTASWNTMISGYAQVGLMGEASMLFAVMP-----EKNCVSWSAMVSGYV 111
F ++E + WNT+I GYA++G A L+ M E + ++ ++
Sbjct: 73 HKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVT 132
Query: 112 ACGDLDAAVECFYAAPVRS-----VITWTAMITGYMKFGRVESAERLFREMSLKTLVTWN 166
D+ E ++ +RS + +++ Y G V SA ++F +M K LV WN
Sbjct: 133 TMADVRLG-ETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 167 AMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKS 226
++I G+ ENG+ E+ L L+ M G KP+ ++ S+L C+ + AL LGK+VH + K
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 251
Query: 227 PLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLF 286
L+ + + L+ +YA+CG ++EA LF ++ K+ VSW ++I G A +G G++A+ LF
Sbjct: 252 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 311
Query: 287 DEMRH-DGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLG 345
M +G+ P ITFV +L AC+H G+V G +YF M ++ I+ + EH+ CMVDLL
Sbjct: 312 KYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLA 371
Query: 346 RAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQ 405
RAG++ +A + IKSMP +P+ I+ TLLGAC +H + DLAEFA +L+L+P+ + YV
Sbjct: 372 RAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVL 431
Query: 406 LANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIHXX 465
L+N+YA++ RW V +IR+ M + V K PG+S +E+ + VHEF D+ HP+ +I+
Sbjct: 432 LSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAK 491
Query: 466 XXXXXXXXXXAGYVPDLEFALHDVGEELKEQLLLWHSEKLAIAYGLLKVPLGLPIRVFKN 525
GYVP + DV EE KE +++HSEK+AIA+ L+ P PI V KN
Sbjct: 492 LKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKN 551
Query: 526 LRVCGDCHTAIKYISAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
LRVC DCH AIK +S + REI+VRD +RFHHFK+G CSC DYW
Sbjct: 552 LRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 101/236 (42%), Gaps = 42/236 (17%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKI------PEPNTVSYNIMLAC------- 47
M K V WNS+++ FA ++G E+A L+ ++ P+ T+ +++ AC
Sbjct: 182 MPEKDLVAWNSVINGFA-ENGKPEEALALYTEMNSKGIKPDGFTI-VSLLSACAKIGALT 239
Query: 48 -----HLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVS 102
H++ VG R + S N ++ YA+ G + EA LF M +KN VS
Sbjct: 240 LGKRVHVYMIKVGLTR---------NLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVS 290
Query: 103 WSAMVSGYVACGDLDAAVECF-YAAPVRSV----ITWTAMITGYMKFGRVESAERLFREM 157
W++++ G G A+E F Y + IT+ ++ G V+ FR M
Sbjct: 291 WTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRM 350
Query: 158 SLKTLVT-----WNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCS 208
+ + + M+ G+ + + KSM +PN + ++L C+
Sbjct: 351 REEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSM---PMQPNVVIWRTLLGACT 403
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 411 bits (1057), Expect = e-115, Method: Compositional matrix adjust.
Identities = 220/614 (35%), Positives = 343/614 (55%), Gaps = 59/614 (9%)
Query: 9 WNSILSAFAKKHGNFEQARQLFEKIP----EPNTVSY-NIMLACH-LHHFGVGS---ARA 59
WN+I+ +++ + +F+ A ++ + P++ ++ +++ AC L H +G A+
Sbjct: 87 WNAIIRGYSRNN-HFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQV 145
Query: 60 F---FDRMEVKDTASWNTMISGYAQVGLMGEASMLFA--VMPEKNCVSWSAMVSGYVACG 114
F FD D N +I+ YA+ +G A +F +PE+ VSW+A+VS Y G
Sbjct: 146 FRLGFD----ADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNG 201
Query: 115 DLDAAVECFYAAPVRSVI-TWTAMI----------------------------------- 138
+ A+E F V W A++
Sbjct: 202 EPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI 261
Query: 139 ---TGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKP 195
T Y K G+V +A+ LF +M L+ WNAMI+GY +NG A + + +F M+ +P
Sbjct: 262 SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRP 321
Query: 196 NALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELF 255
+ +S+TS + C+ + +L+ + +++ V +S D ++LI M+AKCG ++ A +F
Sbjct: 322 DTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVF 381
Query: 256 VQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVD 315
+ +D+V W+AMI GY HG +A+ L+ M G+ P+ +TF+ +L+ACNH+G+V
Sbjct: 382 DRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVR 441
Query: 316 LGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGA 375
G +FN M D I + +HYAC++DLLGRAG L +A ++IK MP +P ++G LL A
Sbjct: 442 EGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500
Query: 376 CRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAP 435
C+ H++++L E+AA+ L +DPS+ YVQL+N+YAA W+ VA +R MKE + K
Sbjct: 501 CKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDV 560
Query: 436 GYSWIEISSEVHEFRSSDRLHPELASIHXXXXXXXXXXXXAGYVPDLEFALHDVGEELKE 495
G SW+E+ + FR D+ HP I G+V + + +LHD+ +E E
Sbjct: 561 GCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAE 620
Query: 496 QLLLWHSEKLAIAYGLLKVPLGLPIRVFKNLRVCGDCHTAIKYISAIEGREIIVRDTTRF 555
+ L HSE++AIAYGL+ P G P+R+ KNLR C +CH A K IS + REI+VRDT RF
Sbjct: 621 ETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRF 680
Query: 556 HHFKDGFCSCSDYW 569
HHFKDG CSC DYW
Sbjct: 681 HHFKDGVCSCGDYW 694
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 164/364 (45%), Gaps = 45/364 (12%)
Query: 57 ARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYV--ACG 114
AR FD + WN +I GY++ +A ++++ M VS + ++ AC
Sbjct: 72 ARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLAR-VSPDSFTFPHLLKACS 130
Query: 115 DLD-------AAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSL--KTLVTW 165
L + F V +I Y K R+ SA +F + L +T+V+W
Sbjct: 131 GLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSW 190
Query: 166 NAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCK 225
A+++ Y +NG + L++F M + KP+ ++L SVL + L L+ G+ +H V K
Sbjct: 191 TAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVK 250
Query: 226 SPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHL 285
L + SL +MYAKCG + A LF ++ +++ WNAMISGYA++G +A+ +
Sbjct: 251 MGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDM 310
Query: 286 FDEMRHDGMKPDWITFVAVLLACNHAG--------------------------LVDL--- 316
F EM + ++PD I+ + + AC G L+D+
Sbjct: 311 FHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAK 370
Query: 317 -GVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMP---FKPHPAIFGTL 372
G +V D + ++ M+ G GR EA+ L ++M P+ F L
Sbjct: 371 CGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGL 430
Query: 373 LGAC 376
L AC
Sbjct: 431 LMAC 434
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 118/228 (51%), Gaps = 3/228 (1%)
Query: 135 TAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAK 194
T +I FG + A ++F ++ + WNA+I GY N +D L ++ +M +
Sbjct: 57 TKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVS 116
Query: 195 PNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWEL 254
P++ + +L CS LS LQ+G+ VH V + +D LI++YAKC L A +
Sbjct: 117 PDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTV 176
Query: 255 F--VQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAG 312
F + +P + IVSW A++S YAQ+G +AL +F +MR +KPDW+ V+VL A
Sbjct: 177 FEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQ 236
Query: 313 LVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSM 360
+ G +V+ G++ +P+ + + + G++ A L M
Sbjct: 237 DLKQGRSIHASVVK-MGLEIEPDLLISLNTMYAKCGQVATAKILFDKM 283
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 411 bits (1056), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/563 (39%), Positives = 326/563 (57%), Gaps = 15/563 (2%)
Query: 19 KHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISG 78
K G+F A ++ ++ + N +S NI++ ++ + +AR FD M + +WN MI+G
Sbjct: 6 KLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAG 65
Query: 79 YAQVGLMGEASMLFAVM------PEKNCVSWSAMVSGY-----VACGDLDAAVECFYAAP 127
Q E LF M P++ + ++ SG V+ G Y
Sbjct: 66 LIQFEFNEEGLSLFREMHGLGFSPDE--YTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLE 123
Query: 128 VRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKS 187
+ V+ +++ YM+ G+++ E + R M ++ LV WN +I G +NG E L L+K
Sbjct: 124 LDLVVN-SSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKM 182
Query: 188 MLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGD 247
M SG +PN ++ +VL CS+L+ G+Q+H K SS +SLISMY+KCG
Sbjct: 183 MKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGC 242
Query: 248 LKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEM-RHDGMKPDWITFVAVLL 306
L +A + F + +D V W++MIS Y HG G++A+ LF+ M M+ + + F+ +L
Sbjct: 243 LGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLY 302
Query: 307 ACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHP 366
AC+H+GL D G++ F+MMV +G K +HY C+VDLLGRAG L +A +I+SMP K
Sbjct: 303 ACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDI 362
Query: 367 AIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSM 426
I+ TLL AC IHKN ++A+ K +L++DP+ + YV LANV+A+ RW V+ +R+SM
Sbjct: 363 VIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSM 422
Query: 427 KENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIHXXXXXXXXXXXXAGYVPDLEFAL 486
++ V K G SW E EVH+F+ DR + I+ GY PD L
Sbjct: 423 RDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVL 482
Query: 487 HDVGEELKEQLLLWHSEKLAIAYGLLKVPLGLPIRVFKNLRVCGDCHTAIKYISAIEGRE 546
HD+ EE KE L+ HSEKLA+A+ L+ +P G PIR+ KNLRVC DCH A KYIS I+ RE
Sbjct: 483 HDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNRE 542
Query: 547 IIVRDTTRFHHFKDGFCSCSDYW 569
I +RD +RFHHF +G CSC DYW
Sbjct: 543 ITLRDGSRFHHFINGKCSCGDYW 565
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 119/213 (55%)
Query: 107 VSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWN 166
+S Y GD +AV + ++ ++ +I GY++ G + +A ++F EM + L TWN
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 167 AMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKS 226
AMIAG ++ E+GL LF+ M G P+ +L SV G + L ++ +G+Q+H K
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120
Query: 227 PLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLF 286
L D +SL MY + G L++ + +P +++V+WN +I G AQ+G E L+L+
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY 180
Query: 287 DEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQ 319
M+ G +P+ ITFV VL +C+ + G Q
Sbjct: 181 KMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQ 213
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 410 bits (1054), Expect = e-114, Method: Compositional matrix adjust.
Identities = 229/623 (36%), Positives = 355/623 (56%), Gaps = 56/623 (8%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIML-----ACHLHHFGVG 55
M K +V+WNS+++ ++G F +A + ++ + + + + L +C +
Sbjct: 375 MTDKDSVSWNSMITGL-DQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKL 433
Query: 56 SARAFFDRMEVK---DTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVA 112
+ + +++ + + N +++ YA+ G + E +F+ MPE + VSW++++ G +A
Sbjct: 434 GQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSII-GALA 492
Query: 113 CGD--LDAAVECFYAAP---------------------------------------VRSV 131
+ L AV CF A
Sbjct: 493 RSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEA 552
Query: 132 ITWTAMITGYMKFGRVESAERLFREMS-LKTLVTWNAMIAGYVENGRAEDGLKLFKSMLE 190
T A+I Y K G ++ E++F M+ + VTWN+MI+GY+ N L L ML+
Sbjct: 553 TTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQ 612
Query: 191 SGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKE 250
+G + ++ +VL ++++ L+ G +VH ++ L SD G++L+ MY+KCG L
Sbjct: 613 TGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDY 672
Query: 251 AWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMK-PDWITFVAVLLACN 309
A F +P ++ SWN+MISGYA+HG GE+AL LF+ M+ DG PD +TFV VL AC+
Sbjct: 673 ALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACS 732
Query: 310 HAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIF 369
HAGL++ G ++F M +G+ + EH++CM D+LGRAG L + D I+ MP KP+ I+
Sbjct: 733 HAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIW 792
Query: 370 GTLLGA-CRIH-KNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMK 427
T+LGA CR + + +L + AA+ L +L+P +A YV L N+YAA RWE + + R+ MK
Sbjct: 793 RTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMK 852
Query: 428 ENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIHXXXXXXXXXXXXAGYVPDLEFALH 487
+ V K GYSW+ + VH F + D+ HP+ I+ AGYVP FAL+
Sbjct: 853 DADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALY 912
Query: 488 DVGEELKEQLLLWHSEKLAIAYGL-LKVPLGLPIRVFKNLRVCGDCHTAIKYISAIEGRE 546
D+ +E KE++L +HSEKLA+A+ L + LPIR+ KNLRVCGDCH+A KYIS IEGR+
Sbjct: 913 DLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQ 972
Query: 547 IIVRDTTRFHHFKDGFCSCSDYW 569
II+RD+ RFHHF+DG CSCSD+W
Sbjct: 973 IILRDSNRFHHFQDGACSCSDFW 995
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 157/341 (46%), Gaps = 17/341 (4%)
Query: 37 NTVSYNIMLACHLHHFG-VGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVM 95
+ V N++++ + G VG A F +EVK++ SWN++IS Y+Q G A +F+ M
Sbjct: 138 DAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSM 197
Query: 96 PEKNC----VSWSAMVSGYVACGDLDA----AVECFY--AAPVRSVITWTAMITGYMKFG 145
++ ++V+ + + D + C + + + + +++ + K G
Sbjct: 198 QYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSG 257
Query: 146 RVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLF---KSMLESGAKPNALSLTS 202
+ A ++F +M + VT N ++ G V E+ KLF SM++ + + L+S
Sbjct: 258 SLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSS 317
Query: 203 V-LLGCSNLSALQLGKQVHQLVCKSPLSSDTTA-GTSLISMYAKCGDLKEAWELFVQIPR 260
+ L+ G++VH V + L G L++MYAKCG + +A +F +
Sbjct: 318 FPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTD 377
Query: 261 KDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQY 320
KD VSWN+MI+G Q+G +A+ + MR + P T ++ L +C LG Q
Sbjct: 378 KDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQI 437
Query: 321 FNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMP 361
++ GI ++ L G L E + SMP
Sbjct: 438 HGESLK-LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP 477
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 125/256 (48%), Gaps = 10/256 (3%)
Query: 129 RSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSM 188
+ V +I Y++ G SA ++F EM L+ V+W +++GY NG ++ L + M
Sbjct: 34 KDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDM 93
Query: 189 LESGAKPNALSLTSVLLGCSNLSALQL--GKQVHQLVCKSPLSSDTTAGTSLISMYAKC- 245
++ G N + SVL C + ++ + G+Q+H L+ K + D LISMY KC
Sbjct: 94 VKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCI 153
Query: 246 GDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVA-V 304
G + A F I K+ VSWN++IS Y+Q G A +F M++DG +P TF + V
Sbjct: 154 GSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLV 213
Query: 305 LLACNHAGLVDLGVQYFNMM---VRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMP 361
AC+ L + V+ + ++ G+ T + +V ++G L A + M
Sbjct: 214 TTACS---LTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQME 270
Query: 362 FKPHPAIFGTLLGACR 377
+ + G ++G R
Sbjct: 271 TRNAVTLNGLMVGLVR 286
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 104/434 (23%), Positives = 194/434 (44%), Gaps = 35/434 (8%)
Query: 10 NSILSAFAKKHGNFEQARQLFEKIPEPNTVSYN-IMLACHLHHFGVGSARAFFDRMEVKD 68
+ ++SAFAK G+ AR++F ++ N V+ N +M+ +G + + F D + D
Sbjct: 247 SGLVSAFAKS-GSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMID 305
Query: 69 TA--SWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYAA 126
+ S+ ++S + + L E + + ++ + +V V G+
Sbjct: 306 VSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVIT-TGLVDFMVGIGN----------- 353
Query: 127 PVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFK 186
++ Y K G + A R+F M+ K V+WN+MI G +NG + ++ +K
Sbjct: 354 ---------GLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYK 404
Query: 187 SMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCG 246
SM P + +L S L C++L +LG+Q+H K + + + +L+++YA+ G
Sbjct: 405 SMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETG 464
Query: 247 DLKEAWELFVQIPRKDIVSWNAMISGYAQHGAG-EKALHLFDEMRHDGMKPDWITFVAVL 305
L E ++F +P D VSWN++I A+ +A+ F + G K + ITF +VL
Sbjct: 465 YLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVL 524
Query: 306 LACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPH 365
A + +LG Q + +++ I + ++ G+ G + + M +
Sbjct: 525 SAVSSLSFGELGKQIHGLALKN-NIADEATTENALIACYGKCGEMDGCEKIFSRMAERRD 583
Query: 366 PAIFGTLLGACRIH-----KNLDLAEFAAKNLLELDP-SSATGYVQLANVYAAQNRWE-H 418
+ +++ IH K LDL F + LD AT A+V + E H
Sbjct: 584 NVTWNSMISG-YIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVH 642
Query: 419 VARIRRSMKENKVV 432
+R ++ + VV
Sbjct: 643 ACSVRACLESDVVV 656
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 137/276 (49%), Gaps = 15/276 (5%)
Query: 28 QLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGE 87
+L++ + + N ++ +L SAR FD M +++ SW ++SGY++ G E
Sbjct: 26 RLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKE 85
Query: 88 ASMLFAVMPEKNCVSWS-AMVSGYVACGDLDAAVECF----------YAAPVRSVITWTA 136
A + M ++ S A VS AC ++ + F + V +V++
Sbjct: 86 ALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVS-NV 144
Query: 137 MITGYMK-FGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKP 195
+I+ Y K G V A F ++ +K V+WN++I+ Y + G ++F SM G++P
Sbjct: 145 LISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRP 204
Query: 196 NALSLTSVLLGCSNLSA--LQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWE 253
+ S++ +L+ ++L +Q+ + KS L +D G+ L+S +AK G L A +
Sbjct: 205 TEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARK 264
Query: 254 LFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEM 289
+F Q+ ++ V+ N ++ G + GE+A LF +M
Sbjct: 265 VFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM 300
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 2/109 (1%)
Query: 220 HQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAG 279
H + K+ L D +LI+ Y + GD A ++F ++P ++ VSW ++SGY+++G
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 280 EKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDL--GVQYFNMMVR 326
++AL +M +G+ + FV+VL AC G V + G Q +M +
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFK 132
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 405 bits (1042), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/577 (38%), Positives = 329/577 (57%), Gaps = 21/577 (3%)
Query: 11 SILSAFAKKHGNFEQARQLFEKIPEPNTVSY------NIMLACHLHHFGVGSARAFFDRM 64
S L A K + E R L K+ + +VSY + ++ C+L A FD M
Sbjct: 35 SSLIAAVKSCVSIELCRLLHCKVVK--SVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEM 92
Query: 65 EVKDTASWNTMISGYAQVGLMGEA------SMLFAVMPEKNCVSWSAMVSGYVACGDLDA 118
+D SWN++ISGY+ G +G+ M+ V N V++ +M+S V G +
Sbjct: 93 PERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEE 152
Query: 119 AVECFYAAPVR-----SVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYV 173
C + ++ V A I Y K G + S+ +LF ++S+K LV+WN MI ++
Sbjct: 153 G-RCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHL 211
Query: 174 ENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTT 233
+NG AE GL F G +P+ + +VL C ++ ++L + +H L+ S +
Sbjct: 212 QNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKC 271
Query: 234 AGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDG 293
T+L+ +Y+K G L+++ +F +I D ++W AM++ YA HG G A+ F+ M H G
Sbjct: 272 ITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYG 331
Query: 294 MKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEA 353
+ PD +TF +L AC+H+GLV+ G YF M + + I + +HY+CMVDLLGR+G L +A
Sbjct: 332 ISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDA 391
Query: 354 VDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQ 413
LIK MP +P ++G LLGACR++K+ L AA+ L EL+P YV L+N+Y+A
Sbjct: 392 YGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSAS 451
Query: 414 NRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIHXXXXXXXXXX 473
W+ +RIR MK+ +V+A G S+IE +++H+F D HPE I
Sbjct: 452 GLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKM 511
Query: 474 XXA-GYVPDLEFALHDVGEELKEQLLLWHSEKLAIAYGLLKVPLGLPIRVFKNLRVCGDC 532
GY EF LHDVGE++KE+++ HSEK+A+A+GLL V PI + KNLR+CGDC
Sbjct: 512 KSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDC 571
Query: 533 HTAIKYISAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
H K IS IE R II+RD+ RFHHF DG CSCSDYW
Sbjct: 572 HETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 85/167 (50%), Gaps = 3/167 (1%)
Query: 199 SLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQI 258
+++S++ + +++L + +H V KS G L+ Y + G A +LF ++
Sbjct: 33 NVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEM 92
Query: 259 PRKDIVSWNAMISGYAQHGAGEKALHLFDEM--RHDGMKPDWITFVAVLLACNHAGLVDL 316
P +D+VSWN++ISGY+ G K + M G +P+ +TF++++ AC + G +
Sbjct: 93 PERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEE 152
Query: 317 GVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFK 363
G + + +V FG+ + + ++ G+ G L + L + + K
Sbjct: 153 G-RCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIK 198
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 405 bits (1041), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/521 (40%), Positives = 312/521 (59%), Gaps = 9/521 (1%)
Query: 57 ARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWS-AMVSGYVACGD 115
A F+R D +WN M++GY Q + LFA+M ++ S + + + CG
Sbjct: 471 AEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGF 529
Query: 116 LDAAVEC--FYAAPVRS---VITW--TAMITGYMKFGRVESAERLFREMSLKTLVTWNAM 168
L A + +A ++S + W + ++ Y+K G + +A+ F + + V W M
Sbjct: 530 LFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTM 589
Query: 169 IAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPL 228
I+G +ENG E +F M G P+ ++ ++ S L+AL+ G+Q+H K
Sbjct: 590 ISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNC 649
Query: 229 SSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDE 288
++D GTSL+ MYAKCG + +A+ LF +I +I +WNAM+ G AQHG G++ L LF +
Sbjct: 650 TNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQ 709
Query: 289 MRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAG 348
M+ G+KPD +TF+ VL AC+H+GLV ++ M D+GIK + EHY+C+ D LGRAG
Sbjct: 710 MKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAG 769
Query: 349 RLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLAN 408
+ +A +LI+SM + +++ TLL ACR+ + + + A LLEL+P ++ YV L+N
Sbjct: 770 LVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSN 829
Query: 409 VYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIHXXXXX 468
+YAA ++W+ + R MK +KV K PG+SWIE+ +++H F DR + + I+
Sbjct: 830 MYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKD 889
Query: 469 XXXXXXXAGYVPDLEFALHDVGEELKEQLLLWHSEKLAIAYGLLKVPLGLPIRVFKNLRV 528
GYVP+ +F L DV EE KE+ L +HSEKLA+A+GLL P PIRV KNLRV
Sbjct: 890 MIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRV 949
Query: 529 CGDCHTAIKYISAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
CGDCH A+KYI+ + REI++RD RFH FKDG CSC DYW
Sbjct: 950 CGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 169/395 (42%), Gaps = 26/395 (6%)
Query: 1 MKVKSTVTWNSILSAFAK---KHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSA 57
M + V WN +L A+ + K + + PN ++ ++ G
Sbjct: 206 MPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQV 265
Query: 58 RAFF---DRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNC----VSWSAMVSGY 110
++F D V + N +S Y G FA M E + V++ M++
Sbjct: 266 KSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATA 325
Query: 111 VACGDL--DAAVECFYAAPVRSVI--TWTAMITGYMKFGRVESAERLFREMSLKTLVTWN 166
V L V C ++ ++I Y K + A +F MS + L++WN
Sbjct: 326 VKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWN 385
Query: 167 AMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNL-SALQLGKQVHQLVCK 225
++IAG +NG + + LF +L G KP+ ++TSVL S+L L L KQVH K
Sbjct: 386 SVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIK 445
Query: 226 SPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHL 285
SD+ T+LI Y++ +KEA E+ + D+V+WNAM++GY Q G K L L
Sbjct: 446 INNVSDSFVSTALIDAYSRNRCMKEA-EILFERHNFDLVAWNAMMAGYTQSHDGHKTLKL 504
Query: 286 FDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEH----YACMV 341
F M G + D T V C ++ G Q V + IK+ + + ++
Sbjct: 505 FALMHKQGERSDDFTLATVFKTCGFLFAINQGKQ-----VHAYAIKSGYDLDLWVSSGIL 559
Query: 342 DLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGAC 376
D+ + G + A S+P P + T++ C
Sbjct: 560 DMYVKCGDMSAAQFAFDSIPV-PDDVAWTTMISGC 593
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 153/326 (46%), Gaps = 19/326 (5%)
Query: 1 MKVKSTVTWNSILSAFAKKHG----NFEQARQLFEKIPEPNTVSYNIMLACHLH---HFG 53
M + V+WNSIL+A+A+ N +QA LF + + + + L+ L H G
Sbjct: 100 MPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSG 159
Query: 54 VGSARAFFDRMEVKDTASWNTMISG-----YAQVGLMGEASMLFAVMPEKNCVSWSAMVS 108
A F K + ++G Y + G + E +LF MP ++ V W+ M+
Sbjct: 160 YVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLK 219
Query: 109 GYVACG------DLDAAVECFYAAPVRSVITWTAMITGY-MKFGRVESAERLFREMSLKT 161
Y+ G DL +A P + A I+G G+V+S S+
Sbjct: 220 AYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSE 279
Query: 162 LVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQ 221
++ N ++ Y+ +G+ LK F M+ES + + ++ +L + +L LG+QVH
Sbjct: 280 IIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHC 339
Query: 222 LVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEK 281
+ K L T SLI+MY K A +F + +D++SWN++I+G AQ+G +
Sbjct: 340 MALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVE 399
Query: 282 ALHLFDEMRHDGMKPDWITFVAVLLA 307
A+ LF ++ G+KPD T +VL A
Sbjct: 400 AVCLFMQLLRCGLKPDQYTMTSVLKA 425
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 93/189 (49%), Gaps = 7/189 (3%)
Query: 118 AAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGR 177
A + F P R +I +I+ Y K G + A R+F +M + LV+WN+++A Y ++
Sbjct: 63 ARILTFEENPERFLIN--NLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSE 120
Query: 178 A-----EDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDT 232
+ LF+ + + + ++L+ +L C + + + H CK L D
Sbjct: 121 CVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDE 180
Query: 233 TAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHD 292
+L+++Y K G +KE LF ++P +D+V WN M+ Y + G E+A+ L
Sbjct: 181 FVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSS 240
Query: 293 GMKPDWITF 301
G+ P+ IT
Sbjct: 241 GLNPNEITL 249
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 134/322 (41%), Gaps = 52/322 (16%)
Query: 21 GNFEQARQL-FEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGY 79
G AR L FE+ PE + N +++ + + AR FD+M +D SWN++++ Y
Sbjct: 58 GKCTHARILTFEENPERFLI--NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAY 115
Query: 80 AQ-----VGLMGEASMLFAVMPEKNCVSWSAMV----------SGYVACGDLDAAVECFY 124
AQ V + +A +LF ++ ++ V S M SGYV + C
Sbjct: 116 AQSSECVVENIQQAFLLFRIL-RQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKI 174
Query: 125 AAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKL 184
+ A++ Y+KFG+V+ + LF EM + +V WN M+ Y+E G E+ + L
Sbjct: 175 GLDGDEFVA-GALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL 233
Query: 185 FKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAK 244
+ SG PN ++L +L+ + D+ AG + +A
Sbjct: 234 SSAFHSSGLNPNEITL--------------------RLLARIS-GDDSDAGQ--VKSFAN 270
Query: 245 CGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAV 304
D E I+ N +S Y G L F +M ++ D +TF+ +
Sbjct: 271 GNDASSVSE---------IIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILM 321
Query: 305 LLACNHAGLVDLGVQYFNMMVR 326
L + LG Q M ++
Sbjct: 322 LATAVKVDSLALGQQVHCMALK 343
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 6/158 (3%)
Query: 211 SALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMI 270
S L LGK H + + + +LISMY+KCG L A +F ++P +D+VSWN+++
Sbjct: 53 SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSIL 112
Query: 271 SGYAQHGAG-----EKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMV 325
+ YAQ ++A LF +R D + +T +L C H+G V + F+
Sbjct: 113 AAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV-WASESFHGYA 171
Query: 326 RDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFK 363
G+ +V++ + G++ E L + MP++
Sbjct: 172 CKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYR 209
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 404 bits (1039), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/584 (37%), Positives = 331/584 (56%), Gaps = 19/584 (3%)
Query: 3 VKSTVTWNSILSAFAK-----KHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSA 57
V T+ + ++ F K H + A Q+ ++ +P + N M+ H +
Sbjct: 31 VDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKS 90
Query: 58 RAFFDRM-----EVK-DTASWNTMISGYAQVGL-MGEASMLFAVMP-----EKNCVSWSA 105
F+ R+ ++K D + N ++ A GL M E + M + + +
Sbjct: 91 FDFYRRILSSGNDLKPDNYTVNFLVQ--ACTGLRMRETGLQVHGMTIRRGFDNDPHVQTG 148
Query: 106 MVSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTW 165
++S Y G LD+ + F + P + TAM+T + G V A +LF M + + W
Sbjct: 149 LISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAW 208
Query: 166 NAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCK 225
NAMI+GY + G + + L +F M G K N +++ SVL C+ L AL G+ H + +
Sbjct: 209 NAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIER 268
Query: 226 SPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHL 285
+ + T+L+ +YAKCGD+++A E+F + K++ +W++ ++G A +G GEK L L
Sbjct: 269 NKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLEL 328
Query: 286 FDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLG 345
F M+ DG+ P+ +TFV+VL C+ G VD G ++F+ M +FGI+ + EHY C+VDL
Sbjct: 329 FSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYA 388
Query: 346 RAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQ 405
RAGRL +AV +I+ MP KPH A++ +LL A R++KNL+L A+K +LEL+ ++ YV
Sbjct: 389 RAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVL 448
Query: 406 LANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIHXX 465
L+N+YA N W++V+ +R+SMK V K PG S +E++ EVHEF D+ HP+ I
Sbjct: 449 LSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAV 508
Query: 466 XXXXXXXXXXAGYVPDLEFALHDVGEELKEQLLLWHSEKLAIAYGLLKVPLGLPIRVFKN 525
AGY D + D+ EE KE L HSEK AIA+G++ + +PIR+ KN
Sbjct: 509 WKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKN 568
Query: 526 LRVCGDCHTAIKYISAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
LRVCGDCH IS I REIIVRD RFHHFKDG CSC+ +W
Sbjct: 569 LRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGHCSCNGFW 612
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 404 bits (1038), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/614 (34%), Positives = 341/614 (55%), Gaps = 50/614 (8%)
Query: 5 STVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSA----RAF 60
+ ++ N ++ + K+ G +QA ++ + P+ +Y +++ C H + A R
Sbjct: 45 AKISNNQLIQSLCKE-GKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHI 103
Query: 61 FDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGD----- 115
D +D +I Y+ +G + A +F ++ W+A+ G
Sbjct: 104 LDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVL 163
Query: 116 ---------------------LDAAV--EC----------FYAAPVRS-----VITWTAM 137
L A V EC +A R V T +
Sbjct: 164 GLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTL 223
Query: 138 ITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLES--GAKP 195
+ Y +FG V+ A +F M ++ +V+W+AMIA Y +NG+A + L+ F+ M+ + P
Sbjct: 224 VDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSP 283
Query: 196 NALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELF 255
N++++ SVL C++L+AL+ GK +H + + L S ++L++MY +CG L+ +F
Sbjct: 284 NSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVF 343
Query: 256 VQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVD 315
++ +D+VSWN++IS Y HG G+KA+ +F+EM +G P +TFV+VL AC+H GLV+
Sbjct: 344 DRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVE 403
Query: 316 LGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGA 375
G + F M RD GIK + EHYACMVDLLGRA RL EA +++ M +P P ++G+LLG+
Sbjct: 404 EGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGS 463
Query: 376 CRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAP 435
CRIH N++LAE A++ L L+P +A YV LA++YA W+ V R+++ ++ + K P
Sbjct: 464 CRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLP 523
Query: 436 GYSWIEISSEVHEFRSSDRLHPELASIHXXXXXXXXXXXXAGYVPDLEFALHDVGEELKE 495
G W+E+ +++ F S D +P + IH GY+P + L+++ E KE
Sbjct: 524 GRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKE 583
Query: 496 QLLLWHSEKLAIAYGLLKVPLGLPIRVFKNLRVCGDCHTAIKYISAIEGREIIVRDTTRF 555
+++L HSEKLA+A+GL+ G PIR+ KNLR+C DCH K+IS +EI+VRD RF
Sbjct: 584 RIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRF 643
Query: 556 HHFKDGFCSCSDYW 569
H FK+G CSC DYW
Sbjct: 644 HRFKNGVCSCGDYW 657
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 402 bits (1034), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/581 (38%), Positives = 329/581 (56%), Gaps = 21/581 (3%)
Query: 7 VTWNSILSAFAKKHGNFEQARQLFEKI------PEPNTVSYNIMLACHLHHFGVGSA-RA 59
VTWNS+LS +A K G + A + +++ P +++S + H +G A
Sbjct: 191 VTWNSLLSGYASK-GLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHG 249
Query: 60 FFDRMEV-KDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGY-VAC--GD 115
+ R ++ D T+I Y + G + A M+F +M KN V+W+++VSG AC D
Sbjct: 250 YILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKD 309
Query: 116 LDAAVECFYAAPVR-SVITWTAMITGYMKFGRVESAERLFREMSLK----TLVTWNAMIA 170
+A + ++ ITW ++ +GY G+ E A + +M K +V+W A+ +
Sbjct: 310 AEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFS 369
Query: 171 GYVENGRAEDGLKLFKSMLESGAKPNALSLTSVL--LGCSNLSALQLGKQVHQLVCKSPL 228
G +NG + LK+F M E G PNA +++++L LGC LS L GK+VH + L
Sbjct: 370 GCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGC--LSLLHSGKEVHGFCLRKNL 427
Query: 229 SSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDE 288
D T+L+ MY K GDL+ A E+F I K + SWN M+ GYA G GE+ + F
Sbjct: 428 ICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSV 487
Query: 289 MRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAG 348
M GM+PD ITF +VL C ++GLV G +YF++M +GI EH +CMVDLLGR+G
Sbjct: 488 MLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSG 547
Query: 349 RLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLAN 408
L EA D I++M KP I+G L +C+IH++L+LAE A K L L+P ++ Y+ + N
Sbjct: 548 YLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMIN 607
Query: 409 VYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIHXXXXX 468
+Y+ NRWE V RIR M+ N+V +SWI+I VH F + + HP+ I+
Sbjct: 608 LYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYK 667
Query: 469 XXXXXXXAGYVPDLEFALHDVGEELKEQLLLWHSEKLAIAYGLLKVPLGLPIRVFKNLRV 528
+GYVPD D+ + KE+LL+ H+EKLA+ YGL+K PIRV KN +
Sbjct: 668 LVSEMKKSGYVPDTSCIHQDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNI 727
Query: 529 CGDCHTAIKYISAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
C D HT KY+S + REI++++ R HHF+DG CSC+D W
Sbjct: 728 CSDSHTVAKYMSVLRNREIVLQEGARVHHFRDGKCSCNDSW 768
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 184/400 (46%), Gaps = 20/400 (5%)
Query: 26 ARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLM 85
A +LF+++P+ + +++N ++ +L A F M+ ++++ + QV
Sbjct: 42 ANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSN 101
Query: 86 GEA--------SMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPVRSVITWTAM 137
E + + E N ++++ Y G L+ + + F + R++ +W ++
Sbjct: 102 KEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSI 161
Query: 138 ITGYMKFGRVESAERLFREMSL----KTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGA 193
++ Y K G V+ A L EM + +VTWN++++GY G ++D + + K M +G
Sbjct: 162 LSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGL 221
Query: 194 KPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWE 253
KP+ S++S+L + L+LGK +H + ++ L D T+LI MY K G L A
Sbjct: 222 KPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARM 281
Query: 254 LFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGL 313
+F + K+IV+WN+++SG + + A L M +G+KPD IT+ ++ G
Sbjct: 282 VFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGK 341
Query: 314 VDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMP---FKPHPAIFG 370
+ + M ++ G+ + + + G A+ + M P+ A
Sbjct: 342 PEKALDVIGKM-KEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMS 400
Query: 371 TLLG--AC--RIHKNLDLAEFAAKNLLELDPSSATGYVQL 406
TLL C +H ++ F + L D AT V +
Sbjct: 401 TLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDM 440
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 113/220 (51%), Gaps = 5/220 (2%)
Query: 135 TAMITGYMKF-GRVES---AERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLE 190
T +++ M F GR S A +LF EM + + WN ++ + +G E ++LF+ M
Sbjct: 23 TRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQF 82
Query: 191 SGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKE 250
SGAK ++ +L CSN G+Q+H V + L S+ + SLI MY++ G L+
Sbjct: 83 SGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLEL 142
Query: 251 AWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNH 310
+ ++F + +++ SWN+++S Y + G + A+ L DEM G+KPD +T+ ++L
Sbjct: 143 SRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYAS 202
Query: 311 AGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRL 350
GL + M + G+K + ++ + G L
Sbjct: 203 KGLSKDAIAVLKRM-QIAGLKPSTSSISSLLQAVAEPGHL 241
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 134/325 (41%), Gaps = 81/325 (24%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAF 60
M K+ V WNS++S + AC L A A
Sbjct: 286 MDAKNIVAWNSLVSGLS---------------------------YACLLK-----DAEAL 313
Query: 61 FDRMEVK----DTASWNTMISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSGYVA 112
RME + D +WN++ SGYA +G +A + M EK N VSW+A+ SG
Sbjct: 314 MIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSK 373
Query: 113 CGDLDAAVECFY----------AAPVRSVI-----------------------------T 133
G+ A++ F AA + +++
Sbjct: 374 NGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYV 433
Query: 134 WTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGA 193
TA++ Y K G ++SA +F + K+L +WN M+ GY GR E+G+ F MLE+G
Sbjct: 434 ATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGM 493
Query: 194 KPNALSLTSVLLGCSNLSALQLGKQVHQLV-CKSPLSSDTTAGTSLISMYAKCGDLKEAW 252
+P+A++ TSVL C N +Q G + L+ + + + ++ + + G L EAW
Sbjct: 494 EPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAW 553
Query: 253 ELFVQIPRK-DIVSWNAMISGYAQH 276
+ + K D W A +S H
Sbjct: 554 DFIQTMSLKPDATIWGAFLSSCKIH 578
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 74/147 (50%), Gaps = 2/147 (1%)
Query: 215 LGKQVHQLVCKSPL-SSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGY 273
LG +H + K L +SDT ++ + Y +C L A +LF ++P++D ++WN ++
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 274 AQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTK 333
+ G EKA+ LF EM+ G K T V +L C++ G Q ++R G+++
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLR-LGLESN 123
Query: 334 PEHYACMVDLLGRAGRLPEAVDLIKSM 360
++ + R G+L + + SM
Sbjct: 124 VSMCNSLIVMYSRNGKLELSRKVFNSM 150
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 402 bits (1033), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/524 (39%), Positives = 300/524 (57%), Gaps = 12/524 (2%)
Query: 57 ARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVM----PEKNCVSWSAMVSGYVA 112
AR D M K+ SW MIS Y+Q G EA +FA M + N +++ +++ +
Sbjct: 106 ARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIR 165
Query: 113 CGDLDAAVECFYAAPVR-----SVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNA 167
L + + V+ + ++++ Y K G+++ A +F + + +V+ A
Sbjct: 166 ASGLGLGKQ-IHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTA 224
Query: 168 MIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSP 227
+IAGY + G E+ L++F + G PN ++ S+L S L+ L GKQ H V +
Sbjct: 225 IIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRE 284
Query: 228 LSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFD 287
L SLI MY+KCG+L A LF +P + +SWNAM+ GY++HG G + L LF
Sbjct: 285 LPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFR 344
Query: 288 EMRHDG-MKPDWITFVAVLLACNHAGLVDLGVQYFNMMVR-DFGIKTKPEHYACMVDLLG 345
MR + +KPD +T +AVL C+H + D G+ F+ MV ++G K EHY C+VD+LG
Sbjct: 345 LMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLG 404
Query: 346 RAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQ 405
RAGR+ EA + IK MP KP + G+LLGACR+H ++D+ E + L+E++P +A YV
Sbjct: 405 RAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVI 464
Query: 406 LANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIHXX 465
L+N+YA+ RW V +R M + V K PG SWI+ +H F ++DR HP +
Sbjct: 465 LSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAK 524
Query: 466 XXXXXXXXXXAGYVPDLEFALHDVGEELKEQLLLWHSEKLAIAYGLLKVPLGLPIRVFKN 525
AGYVPDL L+DV EE KE++LL HSEKLA+ +GL+ G+PIRVFKN
Sbjct: 525 MKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKN 584
Query: 526 LRVCGDCHTAIKYISAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
LR+C DCH K S + RE+ +RD RFH DG CSC DYW
Sbjct: 585 LRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 131/228 (57%), Gaps = 3/228 (1%)
Query: 135 TAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAK 194
T ++ Y K +E A ++ EM K +V+W AMI+ Y + G + + L +F M+ S K
Sbjct: 91 TRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGK 150
Query: 195 PNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWEL 254
PN + +VL C S L LGKQ+H L+ K S G+SL+ MYAK G +KEA E+
Sbjct: 151 PNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREI 210
Query: 255 FVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLV 314
F +P +D+VS A+I+GYAQ G E+AL +F + +GM P+++T+ ++L A + L+
Sbjct: 211 FECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALL 270
Query: 315 DLGVQ-YFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMP 361
D G Q + +++ R+ ++ ++D+ + G L A L +MP
Sbjct: 271 DHGKQAHCHVLRRELPFYAVLQN--SLIDMYSKCGNLSYARRLFDNMP 316
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 104/193 (53%), Gaps = 4/193 (2%)
Query: 169 IAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPL 228
I+ NGR ++ L L +ML G + ++L C + AL+ G++VH + K+
Sbjct: 27 ISQLCSNGRLQEAL-LEMAML--GPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRY 83
Query: 229 SSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDE 288
T T L+ Y KC L++A ++ ++P K++VSW AMIS Y+Q G +AL +F E
Sbjct: 84 LPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAE 143
Query: 289 MRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAG 348
M KP+ TF VL +C A + LG Q ++V+ + + + ++D+ +AG
Sbjct: 144 MMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVK-WNYDSHIFVGSSLLDMYAKAG 202
Query: 349 RLPEAVDLIKSMP 361
++ EA ++ + +P
Sbjct: 203 QIKEAREIFECLP 215
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 143/313 (45%), Gaps = 55/313 (17%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKI----PEPNTVSY-NIMLAC-------- 47
M K+ V+W +++S +++ G+ +A +F ++ +PN ++ ++ +C
Sbjct: 113 MPEKNVVSWTAMISRYSQT-GHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGL 171
Query: 48 --HLH----------HFGVGS--------------ARAFFDRMEVKDTASWNTMISGYAQ 81
+H H VGS AR F+ + +D S +I+GYAQ
Sbjct: 172 GKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQ 231
Query: 82 VGLMGEASMLFAVMPEK----NCVSWSAMVSGYVACGDLDAAVECFYAAPVRSV----IT 133
+GL EA +F + + N V+++++++ LD + R + +
Sbjct: 232 LGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVL 291
Query: 134 WTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSML-ESG 192
++I Y K G + A RLF M +T ++WNAM+ GY ++G + L+LF+ M E
Sbjct: 292 QNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKR 351
Query: 193 AKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTS----LISMYAKCGDL 248
KP+A++L +VL GCS+ G + + T GT ++ M + G +
Sbjct: 352 VKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYG--TKPGTEHYGCIVDMLGRAGRI 409
Query: 249 KEAWELFVQIPRK 261
EA+E ++P K
Sbjct: 410 DEAFEFIKRMPSK 422
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 402 bits (1032), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/577 (36%), Positives = 321/577 (55%), Gaps = 56/577 (9%)
Query: 49 LHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVG---LMGEASMLFAVMPE-------- 97
LHH + A F++M ++ SWNT+I G+++ + ++ + +M +
Sbjct: 70 LHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRF 129
Query: 98 ------KNCVS-------------------------WSAMVSGYVACGDLDAAVECFYAA 126
K C S +V YV CG + A FY
Sbjct: 130 TFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKN 189
Query: 127 PVR--------------SVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGY 172
+ ++ W MI GYM+ G ++A LF +M +++V+WN MI+GY
Sbjct: 190 IIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGY 249
Query: 173 VENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDT 232
NG +D +++F+ M + +PN ++L SVL S L +L+LG+ +H S + D
Sbjct: 250 SLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDD 309
Query: 233 TAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHD 292
G++LI MY+KCG +++A +F ++PR+++++W+AMI+G+A HG A+ F +MR
Sbjct: 310 VLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQA 369
Query: 293 GMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPE 352
G++P + ++ +L AC+H GLV+ G +YF+ MV G++ + EHY CMVDLLGR+G L E
Sbjct: 370 GVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDE 429
Query: 353 AVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAA 412
A + I +MP KP I+ LLGACR+ N+++ + A L+++ P + YV L+N+YA+
Sbjct: 430 AEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYAS 489
Query: 413 QNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIHXXXXXXXXX 472
Q W V+ +R MKE + K PG S I+I +HEF D HP+ I+
Sbjct: 490 QGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDK 549
Query: 473 XXXAGYVPDLEFALHDVGEELKEQLLLWHSEKLAIAYGLLKVPLGLPIRVFKNLRVCGDC 532
AGY P L ++ EE KE +L +HSEK+A A+GL+ G PIR+ KNLR+C DC
Sbjct: 550 LRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDC 609
Query: 533 HTAIKYISAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
H++IK IS + R+I VRD RFHHF+DG CSC DYW
Sbjct: 610 HSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 126/268 (47%), Gaps = 14/268 (5%)
Query: 39 VSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPE- 97
V +N+M+ ++ +AR FD+M + SWNTMISGY+ G +A +F M +
Sbjct: 209 VLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKG 268
Query: 98 ---KNCVSWSAMVSGYVACGDLDAAVECFYAAPVRSV----ITWTAMITGYMKFGRVESA 150
N V+ +++ G L+ A + + +A+I Y K G +E A
Sbjct: 269 DIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKA 328
Query: 151 ERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNL 210
+F + + ++TW+AMI G+ +G+A D + F M ++G +P+ ++ ++L CS+
Sbjct: 329 IHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHG 388
Query: 211 SALQLGKQ-VHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK-DIVSWNA 268
++ G++ Q+V L ++ + + G L EA E + +P K D V W A
Sbjct: 389 GLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKA 448
Query: 269 MISGYAQHGAGEKALH----LFDEMRHD 292
++ G E L D + HD
Sbjct: 449 LLGACRMQGNVEMGKRVANILMDMVPHD 476
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 137/280 (48%), Gaps = 22/280 (7%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIPE----PNTVSYNIMLAC--HLHHFGV 54
M+ +S V+WN+++S ++ +G F+ A ++F ++ + PN V+ +L L +
Sbjct: 234 MRQRSVVSWNTMISGYSL-NGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLEL 292
Query: 55 GSARAFF--DRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVA 112
G + D D + +I Y++ G++ +A +F +P +N ++WSAM++G+
Sbjct: 293 GEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAI 352
Query: 113 CGDLDAAVECF---YAAPVR-SVITWTAMITGYMKFGRVESAERLFREM----SLKTLVT 164
G A++CF A VR S + + ++T G VE R F +M L+ +
Sbjct: 353 HGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIE 412
Query: 165 -WNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLV 223
+ M+ +G ++ + +M KP+ + ++L C +++GK+V ++
Sbjct: 413 HYGCMVDLLGRSGLLDEAEEFILNM---PIKPDDVIWKALLGACRMQGNVEMGKRVANIL 469
Query: 224 CKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDI 263
+ D+ A +L +MYA G+ E E+ +++ KDI
Sbjct: 470 MDM-VPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDI 508
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 208 SNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCG----DLKEAWELFVQIPRKDI 263
+N ++ Q+H + KS DT A ++ A DL A ++F Q+P+++
Sbjct: 31 NNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNC 90
Query: 264 VSWNAMISGYAQHGAGEK--ALHLFDEMRHDG-MKPDWITFVAVLLACNHAGLVDLGVQY 320
SWN +I G+++ + A+ LF EM D ++P+ TF +VL AC G + G Q
Sbjct: 91 FSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQI 150
Query: 321 FNMMVR 326
+ ++
Sbjct: 151 HGLALK 156
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 400 bits (1029), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/526 (40%), Positives = 302/526 (57%), Gaps = 16/526 (3%)
Query: 54 VGSARAFFDR--MEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYV 111
V AR F+ + + +N +ISGY + +A+ +F M E S + G V
Sbjct: 104 VADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLV 163
Query: 112 ACGDLDAAV--------ECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLV 163
+ + +C V + IT YMK G VE+ RLF EM +K L+
Sbjct: 164 PLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLI 223
Query: 164 TWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLV 223
TWNA+I+GY +NG A D L+L++ M SG P+ +L SVL C++L A ++G +V +LV
Sbjct: 224 TWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLV 283
Query: 224 CKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKAL 283
+ + + ISMYA+CG+L +A +F +P K +VSW AMI Y HG GE L
Sbjct: 284 ESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGL 343
Query: 284 HLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDL 343
LFD+M G++PD FV VL AC+H+GL D G++ F M R++ ++ PEHY+C+VDL
Sbjct: 344 MLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDL 403
Query: 344 LGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGY 403
LGRAGRL EA++ I+SMP +P A++G LLGAC+IHKN+D+AE A ++E +P++ Y
Sbjct: 404 LGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYY 463
Query: 404 VQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIH 463
V ++N+Y+ E + RIR M+E K PGYS++E VH F + DR H + +H
Sbjct: 464 VLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVH 523
Query: 464 XXXXXXXXXXXXAGYVPDLEFALHDVGEELKEQLLLWHSEKLAIAYGLLKVPLGLPIRVF 523
D D GEE+ HSE+LAIA+G+L G I V
Sbjct: 524 RMLDELETSVMELAGNMDC-----DRGEEVSST-TREHSERLAIAFGILNSIPGTEILVI 577
Query: 524 KNLRVCGDCHTAIKYISAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
KNLRVC DCH +K +S I R+ +VRD +RFH+FKDG CSC DYW
Sbjct: 578 KNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDGVCSCKDYW 623
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 147/312 (47%), Gaps = 25/312 (8%)
Query: 69 TASWNTMISGYAQVGLMGEASMLFAVM------PE--------KNCVSWSAMVSGY-VAC 113
+ WN + A L E+ L+ M P+ K+C S S VSG + C
Sbjct: 18 STPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHC 77
Query: 114 GDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFRE--MSLKTLVTWNAMIAG 171
E P TA+I+ Y K G V A ++F E S + V +NA+I+G
Sbjct: 78 HVTKGGCE---TEP----FVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISG 130
Query: 172 YVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSD 231
Y N + D +F+ M E+G +++++ ++ C+ L LG+ +H K L S+
Sbjct: 131 YTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSE 190
Query: 232 TTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRH 291
S I+MY KCG ++ LF ++P K +++WNA+ISGY+Q+G L L+++M+
Sbjct: 191 VAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKS 250
Query: 292 DGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLP 351
G+ PD T V+VL +C H G +G + +V G + + R G L
Sbjct: 251 SGVCPDPFTLVSVLSSCAHLGAKKIGHE-VGKLVESNGFVPNVFVSNASISMYARCGNLA 309
Query: 352 EAVDLIKSMPFK 363
+A + MP K
Sbjct: 310 KARAVFDIMPVK 321
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 129/305 (42%), Gaps = 16/305 (5%)
Query: 42 NIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKN-C 100
N + ++ V + R FD M VK +WN +ISGY+Q GL + L+ M C
Sbjct: 195 NSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVC 254
Query: 101 VSWSAMVSGYVACGDLDAA---------VECFYAAPVRSVITWTAMITGYMKFGRVESAE 151
+VS +C L A VE P +V A I+ Y + G + A
Sbjct: 255 PDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVP--NVFVSNASISMYARCGNLAKAR 312
Query: 152 RLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLS 211
+F M +K+LV+W AMI Y +G E GL LF M++ G +P+ VL CS+
Sbjct: 313 AVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSG 372
Query: 212 ALQLGKQVHQLVCKS-PLSSDTTAGTSLISMYAKCGDLKEAWELFVQIP-RKDIVSWNAM 269
G ++ + + + L + L+ + + G L EA E +P D W A+
Sbjct: 373 LTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGAL 432
Query: 270 ISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFG 329
+ H + A F ++ +P+ I + ++ G+ +M+R+
Sbjct: 433 LGACKIHKNVDMAELAFAKVIE--FEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERA 490
Query: 330 IKTKP 334
+ KP
Sbjct: 491 FRKKP 495
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 399 bits (1026), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/523 (40%), Positives = 302/523 (57%), Gaps = 9/523 (1%)
Query: 56 SARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGD 115
SA+A F M + S+ +MI+GYA+ GL GEA LF M E+ V+ + C
Sbjct: 349 SAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCA 408
Query: 116 ----LDAAVECFYAAPVRS----VITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNA 167
LD + A++ Y K G ++ AE +F EM +K +++WN
Sbjct: 409 RYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNT 468
Query: 168 MIAGYVENGRAEDGLKLFKSMLESGA-KPNALSLTSVLLGCSNLSALQLGKQVHQLVCKS 226
+I GY +N A + L LF +LE P+ ++ VL C++LSA G+++H + ++
Sbjct: 469 IIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRN 528
Query: 227 PLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLF 286
SD SL+ MYAKCG L A LF I KD+VSW MI+GY HG G++A+ LF
Sbjct: 529 GYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALF 588
Query: 287 DEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGR 346
++MR G++ D I+FV++L AC+H+GLVD G ++FN+M + I+ EHYAC+VD+L R
Sbjct: 589 NQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLAR 648
Query: 347 AGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQL 406
G L +A I++MP P I+G LL CRIH ++ LAE A+ + EL+P + YV +
Sbjct: 649 TGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLM 708
Query: 407 ANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIHXXX 466
AN+YA +WE V R+R+ + + + K PG SWIEI V+ F + D +PE +I
Sbjct: 709 ANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFL 768
Query: 467 XXXXXXXXXAGYVPDLEFALHDVGEELKEQLLLWHSEKLAIAYGLLKVPLGLPIRVFKNL 526
GY P ++AL D E KE+ L HSEKLA+A G++ G IRV KNL
Sbjct: 769 RKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNL 828
Query: 527 RVCGDCHTAIKYISAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
RVCGDCH K++S + REI++RD+ RFH FKDG CSC +W
Sbjct: 829 RVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/325 (32%), Positives = 174/325 (53%), Gaps = 11/325 (3%)
Query: 35 EPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAV 94
E N+V N ++A +L + V SAR FD M +D SWN++I+GY GL + +F
Sbjct: 228 ERNSVG-NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQ 286
Query: 95 MPEKNC-VSWSAMVSGYVACGD--LDAAVECFYAAPVRSVIT-----WTAMITGYMKFGR 146
M + + +VS + C D L + ++ V++ + ++ Y K G
Sbjct: 287 MLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGD 346
Query: 147 VESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLG 206
++SA+ +FREMS +++V++ +MIAGY G A + +KLF+ M E G P+ ++T+VL
Sbjct: 347 LDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNC 406
Query: 207 CSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSW 266
C+ L GK+VH+ + ++ L D +L+ MYAKCG ++EA +F ++ KDI+SW
Sbjct: 407 CARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISW 466
Query: 267 NAMISGYAQHGAGEKALHLFDEMRHDG-MKPDWITFVAVLLACNHAGLVDLGVQYFNMMV 325
N +I GY+++ +AL LF+ + + PD T VL AC D G + ++
Sbjct: 467 NTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIM 526
Query: 326 RDFGIKTKPEHYACMVDLLGRAGRL 350
R+ G + +VD+ + G L
Sbjct: 527 RN-GYFSDRHVANSLVDMYAKCGAL 550
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 164/317 (51%), Gaps = 13/317 (4%)
Query: 57 ARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVM----PEKNCVSWSAMVSGYVA 112
A FD ++++ WN +++ A+ G + LF M E + ++S + + +
Sbjct: 148 ASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSS 207
Query: 113 CGDLDAAVECFYAAPVRSVI-----TWTAMITGYMKFGRVESAERLFREMSLKTLVTWNA 167
+ E + ++S +++ Y+K RV+SA ++F EM+ + +++WN+
Sbjct: 208 LRSVHGG-EQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNS 266
Query: 168 MIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSP 227
+I GYV NG AE GL +F ML SG + + ++ SV GC++ + LG+ VH + K+
Sbjct: 267 IINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKAC 326
Query: 228 LSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFD 287
S + +L+ MY+KCGDL A +F ++ + +VS+ +MI+GYA+ G +A+ LF+
Sbjct: 327 FSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFE 386
Query: 288 EMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFN-MMVRDFGIKTKPEHYACMVDLLGR 346
EM +G+ PD T AVL C L+D G + + D G + ++D+ +
Sbjct: 387 EMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN--ALMDMYAK 444
Query: 347 AGRLPEAVDLIKSMPFK 363
G + EA + M K
Sbjct: 445 CGSMQEAELVFSEMRVK 461
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 120/241 (49%), Gaps = 9/241 (3%)
Query: 141 YMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSL 200
Y G ++ A R+F E+ ++ + WN ++ ++G + LFK M+ SG + ++ +
Sbjct: 139 YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
Query: 201 TSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPR 260
+ V S+L ++ G+Q+H + KS + G SL++ Y K + A ++F ++
Sbjct: 199 SCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTE 258
Query: 261 KDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQY 320
+D++SWN++I+GY +G EK L +F +M G++ D T V+V C + L+ LG
Sbjct: 259 RDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLG--- 315
Query: 321 FNMMVRDFGIKT--KPEHYAC--MVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGAC 376
V G+K E C ++D+ + G L A + + M + + + G
Sbjct: 316 --RAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYA 373
Query: 377 R 377
R
Sbjct: 374 R 374
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 74/145 (51%), Gaps = 2/145 (1%)
Query: 160 KTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQV 219
+++ N + + E+G E+ +KL + P +L SVL C++ +L+ GK+V
Sbjct: 59 RSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEV 116
Query: 220 HQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAG 279
+ + D+ G+ L MY CGDLKEA +F ++ + + WN +++ A+ G
Sbjct: 117 DNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDF 176
Query: 280 EKALHLFDEMRHDGMKPDWITFVAV 304
++ LF +M G++ D TF V
Sbjct: 177 SGSIGLFKKMMSSGVEMDSYTFSCV 201
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 105/243 (43%), Gaps = 26/243 (10%)
Query: 1 MKVKSTVTWNSILSAFAKK-HGNFEQARQLFEKIPEPNTVSYN-IMLACHLHHFGVGSAR 58
M+VK ++WN+I+ ++K + N +A LF + E S + +AC L S
Sbjct: 458 MRVKDIISWNTIIGGYSKNCYAN--EALSLFNLLLEEKRFSPDERTVACVLP--ACASLS 513
Query: 59 AFFDRMEV----------KDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVS 108
AF E+ D N+++ YA+ G + A MLF + K+ VSW+ M++
Sbjct: 514 AFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIA 573
Query: 109 GYVACGDLDAAVECF----YAAPVRSVITWTAMITGYMKFGRVESAERLFR----EMSLK 160
GY G A+ F A I++ +++ G V+ R F E ++
Sbjct: 574 GYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIE 633
Query: 161 TLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVH 220
V A I + R D +K ++ + P+A ++L GC ++L ++V
Sbjct: 634 PTVEHYACIVDML--ARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVA 691
Query: 221 QLV 223
+ V
Sbjct: 692 EKV 694
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 399 bits (1024), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/472 (42%), Positives = 289/472 (61%), Gaps = 9/472 (1%)
Query: 104 SAMVSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLV 163
S++V Y CG L++A F + V++ I+WTAM++GY K GR E A LFR + +K L
Sbjct: 144 SSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLY 203
Query: 164 TWNAMIAGYVENGRAEDGLKLFKSMLESGAKP-NALSLTSVLLGCSNLSALQLGKQVHQL 222
+W A+I+G+V++G+ + +F M + L L+S++ C+NL+A G+QVH L
Sbjct: 204 SWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGL 263
Query: 223 VCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKA 282
V S +LI MYAKC D+ A ++F ++ +D+VSW ++I G AQHG EKA
Sbjct: 264 VIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKA 323
Query: 283 LHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVD 342
L L+D+M G+KP+ +TFV ++ AC+H G V+ G + F M +D+GI+ +HY C++D
Sbjct: 324 LALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLD 383
Query: 343 LLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGAC----RIHKNLDLAEFAAKNLLELDPS 398
LLGR+G L EA +LI +MPF P + LL AC R + +A+ + DPS
Sbjct: 384 LLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPS 443
Query: 399 SATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPE 458
+ Y+ L+N+YA+ + W V+ RR + E +V K PG+S +E+ E F + + HP
Sbjct: 444 T---YILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPL 500
Query: 459 LASI-HXXXXXXXXXXXXAGYVPDLEFALHDVGEELKEQLLLWHSEKLAIAYGLLKVPLG 517
I GYVPD + LHD+ E+ KE+LL WHSE+ A+AYGLLK G
Sbjct: 501 KEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPG 560
Query: 518 LPIRVFKNLRVCGDCHTAIKYISAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
PIR+ KNLRVCGDCH +K+IS I REIIVRD TR+HHFK G CSC+D+W
Sbjct: 561 TPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCNDFW 612
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 136/300 (45%), Gaps = 43/300 (14%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAF 60
++VK+T++W +++S +AK G E+A +LF +P
Sbjct: 166 IRVKNTISWTAMVSGYAKS-GRKEEALELFRILP-------------------------- 198
Query: 61 FDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYV--ACGDLDA 118
VK+ SW +ISG+ Q G EA +F M + +V + AC +L A
Sbjct: 199 -----VKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAA 253
Query: 119 AVECFYAAPV-------RSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAG 171
++ + V A+I Y K V +A+ +F M + +V+W ++I G
Sbjct: 254 SIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVG 313
Query: 172 YVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKS-PLSS 230
++G+AE L L+ M+ G KPN ++ ++ CS++ ++ G+++ Q + K +
Sbjct: 314 MAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRP 373
Query: 231 DTTAGTSLISMYAKCGDLKEAWELFVQIP-RKDIVSWNAMISGYAQHGAGEKALHLFDEM 289
T L+ + + G L EA L +P D +W A++S + G G+ + + D +
Sbjct: 374 SLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHL 433
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 85/187 (45%), Gaps = 30/187 (16%)
Query: 100 CVSWSAMVSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSL 159
C + +V+ Y CG A++ F P R I W +++T + +S
Sbjct: 38 CPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQ-----------ANLSG 86
Query: 160 KTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQV 219
KTL SG +P+ ++++ C+NL ++ G+QV
Sbjct: 87 KTLSV-------------------FSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQV 127
Query: 220 HQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAG 279
H S ++D +SL+ MYAKCG L A +F I K+ +SW AM+SGYA+ G
Sbjct: 128 HCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRK 187
Query: 280 EKALHLF 286
E+AL LF
Sbjct: 188 EEALELF 194
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 74/159 (46%), Gaps = 4/159 (2%)
Query: 207 CSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSW 266
C+ L K +H + K + +L+++Y KCG A ++F ++P +D ++W
Sbjct: 13 CARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAW 72
Query: 267 NAMISGYAQHGAGEKAL-HLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQ-YFNMM 324
++++ Q K L G++PD F A++ AC + G +D G Q + + +
Sbjct: 73 ASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFI 132
Query: 325 VRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFK 363
V ++ + + +VD+ + G L A + S+ K
Sbjct: 133 VSEYANDEVVK--SSLVDMYAKCGLLNSAKAVFDSIRVK 169
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 399 bits (1024), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/530 (40%), Positives = 310/530 (58%), Gaps = 17/530 (3%)
Query: 57 ARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFA-VMPEKN------CVSWSAMVSG 109
AR FD + ++ SW +MI GY G +A LF ++ ++N + +VS
Sbjct: 130 ARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSV 189
Query: 110 YVACGDLDAA--VECFYAAPV-----RSVITWTAMITGYMKFGR--VESAERLFREMSLK 160
AC + A E ++ + R V ++ Y K G V A ++F ++ K
Sbjct: 190 ISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDK 249
Query: 161 TLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKP-NALSLTSVLLGCSNLSALQLGKQV 219
V++N++++ Y ++G + + ++F+ ++++ NA++L++VLL S+ AL++GK +
Sbjct: 250 DRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCI 309
Query: 220 HQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAG 279
H V + L D GTS+I MY KCG ++ A + F ++ K++ SW AMI+GY HG
Sbjct: 310 HDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHA 369
Query: 280 EKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYAC 339
KAL LF M G++P++ITFV+VL AC+HAGL G ++FN M FG++ EHY C
Sbjct: 370 AKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGC 429
Query: 340 MVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSS 399
MVDLLGRAG L +A DLI+ M KP I+ +LL ACRIHKN++LAE + L ELD S+
Sbjct: 430 MVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSN 489
Query: 400 ATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPEL 459
Y+ L+++YA RW+ V R+R MK +VK PG+S +E++ EVH F D HP+
Sbjct: 490 CGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQR 549
Query: 460 ASIHXXXXXXXXXXXXAGYVPDLEFALHDVGEELKEQLLLWHSEKLAIAYGLLKVPLGLP 519
I+ AGYV + HDV EE KE L HSEKLAIA+G++ G
Sbjct: 550 EKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGST 609
Query: 520 IRVFKNLRVCGDCHTAIKYISAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
+ V KNLRVC DCH IK IS I RE +VRD RFHHFKDG CSC DYW
Sbjct: 610 VNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 157/323 (48%), Gaps = 19/323 (5%)
Query: 59 AFFDR-MEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCV-SWSAMVSGYVACGDL 116
F+R ++ D SWN++I+ A+ G EA + F+ M + + + S+ AC L
Sbjct: 30 TLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSL 89
Query: 117 -------DAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMI 169
+ F + +A+I Y G++E A ++F E+ + +V+W +MI
Sbjct: 90 FDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMI 149
Query: 170 AGYVENGRAEDGLKLFKSML------ESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLV 223
GY NG A D + LFK +L + +++ L SV+ CS + A L + +H V
Sbjct: 150 RGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFV 209
Query: 224 CKSPLSSDTTAGTSLISMYAKCGD--LKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEK 281
K + G +L+ YAK G+ + A ++F QI KD VS+N+++S YAQ G +
Sbjct: 210 IKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNE 269
Query: 282 ALHLFDEM-RHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACM 340
A +F + ++ + + IT VLLA +H+G + +G + ++R G++ +
Sbjct: 270 AFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIR-MGLEDDVIVGTSI 328
Query: 341 VDLLGRAGRLPEAVDLIKSMPFK 363
+D+ + GR+ A M K
Sbjct: 329 IDMYCKCGRVETARKAFDRMKNK 351
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 126/247 (51%), Gaps = 23/247 (9%)
Query: 53 GVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMV----- 107
GV AR FD++ KD S+N+++S YAQ G+ EA +F + + V+++A+
Sbjct: 235 GVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVL 294
Query: 108 -----SGYVACGDLDAAVECFYAAPVR-----SVITWTAMITGYMKFGRVESAERLFREM 157
SG + G +C + +R VI T++I Y K GRVE+A + F M
Sbjct: 295 LAVSHSGALRIG------KCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRM 348
Query: 158 SLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLG- 216
K + +W AMIAGY +G A L+LF +M++SG +PN ++ SVL CS+ G
Sbjct: 349 KNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGW 408
Query: 217 KQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK-DIVSWNAMISGYAQ 275
+ + + + + ++ + + G L++A++L ++ K D + W+++++
Sbjct: 409 RWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRI 468
Query: 276 HGAGEKA 282
H E A
Sbjct: 469 HKNVELA 475
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 398 bits (1023), Expect = e-111, Method: Compositional matrix adjust.
Identities = 221/594 (37%), Positives = 319/594 (53%), Gaps = 50/594 (8%)
Query: 26 ARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRM--------------------- 64
AR++F++IPE N + N+M+ ++++ G F M
Sbjct: 93 ARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSC 152
Query: 65 --------EVKDTAS----------WNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAM 106
++ +A+ N ++S Y + G + EA ++ M ++ VSW+++
Sbjct: 153 SGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSL 212
Query: 107 VSGYVACGDLDAAVE-CFYAAPVR---SVITWTAMITGYMKFG--RVESAERLFREMSLK 160
V GY D A+E C V+ T +++ V + +F +M K
Sbjct: 213 VVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKK 272
Query: 161 TLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVH 220
+LV+WN MI Y++N + ++L+ M G +P+A+S+TSVL C + SAL LGK++H
Sbjct: 273 SLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIH 332
Query: 221 QLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGE 280
+ + L + +LI MYAKCG L++A ++F + +D+VSW AMIS Y G G
Sbjct: 333 GYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGC 392
Query: 281 KALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACM 340
A+ LF +++ G+ PD I FV L AC+HAGL++ G F +M + I + EH ACM
Sbjct: 393 DAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACM 452
Query: 341 VDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSA 400
VDLLGRAG++ EA I+ M +P+ ++G LLGACR+H + D+ AA L +L P +
Sbjct: 453 VDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQS 512
Query: 401 TGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELA 460
YV L+N+YA RWE V IR MK + K PG S +E++ +H F DR HP+
Sbjct: 513 GYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSD 572
Query: 461 SIHXXXXXXXXXXXXAGYVPDLEFALHDVGEELKEQLLLWHSEKLAIAYGLLKVP----- 515
I+ GYVPD E ALHDV EE KE L HSEKLAI + L+
Sbjct: 573 EIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEED 632
Query: 516 LGLPIRVFKNLRVCGDCHTAIKYISAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
IR+ KNLR+CGDCH A K IS I REII+RDT RFH F+ G CSC DYW
Sbjct: 633 SNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 141/309 (45%), Gaps = 25/309 (8%)
Query: 137 MITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPN 196
++ Y V SA ++F E+ + ++ N MI YV NG +G+K+F +M +P+
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 197 ALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFV 256
+ VL CS + +G+++H K LSS G L+SMY KCG L EA +
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 257 QIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDL 316
++ R+D+VSWN+++ GYAQ+ + AL + EM + D T ++L A ++ +
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTEN- 258
Query: 317 GVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMP---FKPHPAIFGTLL 373
V Y M G K+ + M+ + + EAV+L M F+P ++L
Sbjct: 259 -VMYVKDMFFKMGKKSLVS-WNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVL 316
Query: 374 GAC----------RIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIR 423
AC +IH ++ + LLE L ++YA E +
Sbjct: 317 PACGDTSALSLGKKIHGYIERKKLIPNLLLE---------NALIDMYAKCGCLEKARDVF 367
Query: 424 RSMKENKVV 432
+MK VV
Sbjct: 368 ENMKSRDVV 376
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/361 (19%), Positives = 141/361 (39%), Gaps = 85/361 (23%)
Query: 22 NFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVK----DTASWNTMIS 77
N + +F K+ + + VS+N+M+ ++ + A + RME D S +++
Sbjct: 258 NVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLP 317
Query: 78 GYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSGYVACGDLDAAVECFYAAPVRSVIT 133
+ + + K N + +A++ Y CG L+ A + F R V++
Sbjct: 318 ACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVS 377
Query: 134 WTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGA 193
WTAMI+ Y G+ +GR D + LF + +SG
Sbjct: 378 WTAMISAY-----------------------------GF--SGRGCDAVALFSKLQDSGL 406
Query: 194 KPNALSLTSVLLGCSNLSALQLGKQVHQLVCKS-PLSSDTTAGTSLISMYAKCGDLKEAW 252
P++++ + L CS+ L+ G+ +L+ ++ ++ + + G +KEA+
Sbjct: 407 VPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAY 466
Query: 253 ELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAG 312
F+Q D+ M+P+ + A+L AC
Sbjct: 467 R-FIQ----DM-----------------------------SMEPNERVWGALLGACRVHS 492
Query: 313 LVDLGVQYFNMMVRDFGIKTKPE---HYACMVDLLGRAGRLPEAV---DLIKSMPFKPHP 366
D+G ++ D + PE +Y + ++ +AGR E +++KS K +P
Sbjct: 493 DTDIG-----LLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNP 547
Query: 367 A 367
Sbjct: 548 G 548
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 70/144 (48%), Gaps = 1/144 (0%)
Query: 217 KQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQH 276
+ VH + L +++ G L+ YA D+ A ++F +IP ++++ N MI Y +
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 277 GAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEH 336
G + + +F M ++PD TF VL AC+ +G + +G + + G+ +
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATK-VGLSSTLFV 177
Query: 337 YACMVDLLGRAGRLPEAVDLIKSM 360
+V + G+ G L EA ++ M
Sbjct: 178 GNGLVSMYGKCGFLSEARLVLDEM 201
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 396 bits (1018), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/455 (42%), Positives = 286/455 (62%), Gaps = 6/455 (1%)
Query: 121 ECFYAAPVRS-----VITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVEN 175
E ++ +RS + +++ Y G V SA ++F +M K LV WN++I G+ EN
Sbjct: 8 ETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAEN 67
Query: 176 GRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAG 235
G+ E+ L L+ M G KP+ ++ S+L C+ + AL LGK+VH + K L+ + +
Sbjct: 68 GKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSS 127
Query: 236 TSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRH-DGM 294
L+ +YA+CG ++EA LF ++ K+ VSW ++I G A +G G++A+ LF M +G+
Sbjct: 128 NVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGL 187
Query: 295 KPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAV 354
P ITFV +L AC+H G+V G +YF M ++ I+ + EH+ CMVDLL RAG++ +A
Sbjct: 188 LPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAY 247
Query: 355 DLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQN 414
+ IKSMP +P+ I+ TLLGAC +H + DLAEFA +L+L+P+ + YV L+N+YA++
Sbjct: 248 EYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQ 307
Query: 415 RWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIHXXXXXXXXXXX 474
RW V +IR+ M + V K PG+S +E+ + VHEF D+ HP+ +I+
Sbjct: 308 RWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLR 367
Query: 475 XAGYVPDLEFALHDVGEELKEQLLLWHSEKLAIAYGLLKVPLGLPIRVFKNLRVCGDCHT 534
GYVP + DV EE KE +++HSEK+AIA+ L+ P PI V KNLRVC DCH
Sbjct: 368 SEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHL 427
Query: 535 AIKYISAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
AIK +S + REI+VRD +RFHHFK+G CSC DYW
Sbjct: 428 AIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 91/151 (60%), Gaps = 1/151 (0%)
Query: 210 LSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAM 269
++ ++LG+ +H +V +S S SL+ +YA CGD+ A+++F ++P KD+V+WN++
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 270 ISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFG 329
I+G+A++G E+AL L+ EM G+KPD T V++L AC G + LG + M++ G
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK-VG 119
Query: 330 IKTKPEHYACMVDLLGRAGRLPEAVDLIKSM 360
+ ++DL R GR+ EA L M
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEM 150
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 114/240 (47%), Gaps = 11/240 (4%)
Query: 54 VGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCV-SWSAMVSGYVA 112
V SA FD+M KD +WN++I+G+A+ G EA L+ M K +VS A
Sbjct: 39 VASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSA 98
Query: 113 CGDLDAA-------VECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTW 165
C + A V R++ + ++ Y + GRVE A+ LF EM K V+W
Sbjct: 99 CAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSW 158
Query: 166 NAMIAGYVENGRAEDGLKLFKSMLES-GAKPNALSLTSVLLGCSNLSALQLG-KQVHQLV 223
++I G NG ++ ++LFK M + G P ++ +L CS+ ++ G + ++
Sbjct: 159 TSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMR 218
Query: 224 CKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIP-RKDIVSWNAMISGYAQHGAGEKA 282
+ + ++ + A+ G +K+A+E +P + ++V W ++ HG + A
Sbjct: 219 EEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 278
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 101/236 (42%), Gaps = 42/236 (17%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKI------PEPNTVSYNIMLAC------- 47
M K V WNS+++ FA ++G E+A L+ ++ P+ T+ +++ AC
Sbjct: 49 MPEKDLVAWNSVINGFA-ENGKPEEALALYTEMNSKGIKPDGFTI-VSLLSACAKIGALT 106
Query: 48 -----HLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVS 102
H++ VG R + S N ++ YA+ G + EA LF M +KN VS
Sbjct: 107 LGKRVHVYMIKVGLTR---------NLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVS 157
Query: 103 WSAMVSGYVACGDLDAAVECF-YAAPVRSV----ITWTAMITGYMKFGRVESAERLFREM 157
W++++ G G A+E F Y + IT+ ++ G V+ FR M
Sbjct: 158 WTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRM 217
Query: 158 SLKTLVT-----WNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCS 208
+ + + M+ G+ + + KSM +PN + ++L C+
Sbjct: 218 REEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSM---PMQPNVVIWRTLLGACT 270
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 395 bits (1014), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/545 (38%), Positives = 319/545 (58%), Gaps = 15/545 (2%)
Query: 28 QLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGE 87
+ + I + V N +L + + AR F++M +D +W T+ISGY+Q +
Sbjct: 85 HILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCD 144
Query: 88 ASMLFAVMPE----KNCVSWSAMVSGYVA-----CGDL--DAAVECFYAAPVRSVITWTA 136
A + F M N + S+++ A CG V+C + + V +A
Sbjct: 145 ALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVH---VGSA 201
Query: 137 MITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPN 196
++ Y ++G ++ A+ +F + + V+WNA+IAG+ E L+LF+ ML G +P+
Sbjct: 202 LLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPS 261
Query: 197 ALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFV 256
S S+ CS+ L+ GK VH + KS AG +L+ MYAK G + +A ++F
Sbjct: 262 HFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFD 321
Query: 257 QIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDL 316
++ ++D+VSWN++++ YAQHG G++A+ F+EMR G++P+ I+F++VL AC+H+GL+D
Sbjct: 322 RLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDE 381
Query: 317 GVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGAC 376
G Y+ +M +D GI + HY +VDLLGRAG L A+ I+ MP +P AI+ LL AC
Sbjct: 382 GWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNAC 440
Query: 377 RIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPG 436
R+HKN +L +AA+++ ELDP +V L N+YA+ RW AR+R+ MKE+ V K P
Sbjct: 441 RMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPA 500
Query: 437 YSWIEISSEVHEFRSSDRLHPELASIHXXXXXXXXXXXXAGYVPDLEFALHDVGEELKEQ 496
SW+EI + +H F ++D HP+ I GYVPD + V ++ +E
Sbjct: 501 CSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREV 560
Query: 497 LLLWHSEKLAIAYGLLKVPLGLPIRVFKNLRVCGDCHTAIKYISAIEGREIIVRDTTRFH 556
L +HSEK+A+A+ LL P G I + KN+RVCGDCHTAIK S + GREIIVRDT RFH
Sbjct: 561 NLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFH 620
Query: 557 HFKDG 561
HFKD
Sbjct: 621 HFKDA 625
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 33/209 (15%)
Query: 201 TSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPR 260
++L C+ L G+ VH + +S D G +L++MYAKCG L+EA ++F ++P+
Sbjct: 64 NTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQ 123
Query: 261 KDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLA--------CNH-- 310
+D V+W +ISGY+QH AL F++M G P+ T +V+ A C H
Sbjct: 124 RDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQL 183
Query: 311 ----------------AGLVDLGVQYFNM----MVRDFGIKTKPEHYACMVDLLGRAGRL 350
+ L+DL +Y M +V D + ++ R
Sbjct: 184 HGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGT 243
Query: 351 PEAVDLIKSM---PFKPHPAIFGTLLGAC 376
+A++L + M F+P + +L GAC
Sbjct: 244 EKALELFQGMLRDGFRPSHFSYASLFGAC 272
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 394 bits (1012), Expect = e-110, Method: Compositional matrix adjust.
Identities = 220/608 (36%), Positives = 321/608 (52%), Gaps = 48/608 (7%)
Query: 9 WNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAF---FDRME 65
+NS+++ F H F + LF I + + L S+R +
Sbjct: 79 YNSLINGFVNNH-LFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLV 137
Query: 66 VK-----DTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAV 120
VK D A+ +++S Y+ G + +A LF +P+++ V+W+A+ SGY G A+
Sbjct: 138 VKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAI 197
Query: 121 ECF-------------YAAPVRSVIT---------W-----------------TAMITGY 141
+ F + V S W T ++ Y
Sbjct: 198 DLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLY 257
Query: 142 MKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLT 201
K G++E A +F M K +VTW+ MI GY N ++G++LF ML+ KP+ S+
Sbjct: 258 AKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIV 317
Query: 202 SVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK 261
L C++L AL LG+ L+ + ++ +LI MYAKCG + +E+F ++ K
Sbjct: 318 GFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEK 377
Query: 262 DIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYF 321
DIV NA ISG A++G + + +F + G+ PD TF+ +L C HAGL+ G+++F
Sbjct: 378 DIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFF 437
Query: 322 NMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKN 381
N + + +K EHY CMVDL GRAG L +A LI MP +P+ ++G LL CR+ K+
Sbjct: 438 NAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKD 497
Query: 382 LDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIE 441
LAE K L+ L+P +A YVQL+N+Y+ RW+ A +R M + + K PGYSWIE
Sbjct: 498 TQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIE 557
Query: 442 ISSEVHEFRSSDRLHPELASIHXXXXXXXXXXXXAGYVPDLEFALHDVGEELKEQLLLWH 501
+ +VHEF + D+ HP I+ G+VP EF DV EE KE++L +H
Sbjct: 558 LEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYH 617
Query: 502 SEKLAIAYGLLKVPLGLPIRVFKNLRVCGDCHTAIKYISAIEGREIIVRDTTRFHHFKDG 561
SEKLA+A GL+ G IRV KNLRVCGDCH +K IS I REI+VRD RFH F +G
Sbjct: 618 SEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNG 677
Query: 562 FCSCSDYW 569
CSC+DYW
Sbjct: 678 SCSCNDYW 685
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 113/217 (52%), Gaps = 1/217 (0%)
Query: 144 FGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSV 203
F + + + LF + +N++I G+V N + L LF S+ + G + + V
Sbjct: 58 FRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLV 117
Query: 204 LLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDI 263
L C+ S+ +LG +H LV K + D A TSL+S+Y+ G L +A +LF +IP + +
Sbjct: 118 LKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSV 177
Query: 264 VSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNM 323
V+W A+ SGY G +A+ LF +M G+KPD V VL AC H G +D G ++
Sbjct: 178 VTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSG-EWIVK 236
Query: 324 MVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSM 360
+ + ++ +V+L + G++ +A + SM
Sbjct: 237 YMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSM 273
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 392 bits (1007), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/617 (35%), Positives = 335/617 (54%), Gaps = 50/617 (8%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKI----PEPNTVSYNIMLAC-HLHHFGVG 55
M V+ +V++N+++ + K E R E + P+ TVS +++ AC HL +
Sbjct: 268 MDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDLLTVS-SVLRACGHLRDLSLA 326
Query: 56 ---------------------------------SARAFFDRMEVKDTASWNTMISGYAQV 82
+AR F+ ME KDT SWN++ISGY Q
Sbjct: 327 KYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQS 386
Query: 83 GLMGEASMLFAVM----PEKNCVSWSAMVSGYVACGDLDAAVECFYAAPVRSVI-----T 133
G + EA LF +M + + +++ ++S DL + ++ ++S I
Sbjct: 387 GDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFG-KGLHSNGIKSGICIDLSV 445
Query: 134 WTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGA 193
A+I Y K G V + ++F M VTWN +I+ V G GL++ M +S
Sbjct: 446 SNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEV 505
Query: 194 KPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWE 253
P+ + L C++L+A +LGK++H + + S+ G +LI MY+KCG L+ +
Sbjct: 506 VPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSR 565
Query: 254 LFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGL 313
+F ++ R+D+V+W MI Y +G GEKAL F +M G+ PD + F+A++ AC+H+GL
Sbjct: 566 VFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGL 625
Query: 314 VDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLL 373
VD G+ F M + I EHYAC+VDLL R+ ++ +A + I++MP KP +I+ ++L
Sbjct: 626 VDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVL 685
Query: 374 GACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVK 433
ACR +++ AE ++ ++EL+P + +N YAA +W+ V+ IR+S+K+ + K
Sbjct: 686 RACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITK 745
Query: 434 APGYSWIEISSEVHEFRSSDRLHPELASIHXXXXXXXXXXXXAGYVPD-LEFALHDVGEE 492
PGYSWIE+ VH F S D P+ +I+ GY+PD E + + EE
Sbjct: 746 NPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEE 805
Query: 493 LKEQLLLWHSEKLAIAYGLLKVPLGLPIRVFKNLRVCGDCHTAIKYISAIEGREIIVRDT 552
K +L+ HSE+LAIA+GLL G P++V KNLRVCGDCH K IS I GREI+VRD
Sbjct: 806 EKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDA 865
Query: 553 TRFHHFKDGFCSCSDYW 569
RFH FKDG CSC D W
Sbjct: 866 NRFHLFKDGTCSCKDRW 882
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 201/420 (47%), Gaps = 51/420 (12%)
Query: 4 KSTVTWNSILSAFAKKHGNFEQARQLFEKIPE----PNTVSY-NIMLACH-LHHFGVGSA 57
K+ WNSI+ AF+K +G F +A + + K+ E P+ ++ +++ AC L +G
Sbjct: 69 KNVYLWNSIIRAFSK-NGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDL 127
Query: 58 --RAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGD 115
D D N ++ Y+++GL+ A +F MP ++ VSW++++SGY + G
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGY 187
Query: 116 LDAAVECFY----------AAPVRSVI-----------------------------TWTA 136
+ A+E ++ + V SV+
Sbjct: 188 YEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNG 247
Query: 137 MITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPN 196
++ Y+KF R A R+F EM ++ V++N MI GY++ E+ +++F L+ KP+
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPD 306
Query: 197 ALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFV 256
L+++SVL C +L L L K ++ + K+ ++T LI +YAKCGD+ A ++F
Sbjct: 307 LLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFN 366
Query: 257 QIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDL 316
+ KD VSWN++ISGY Q G +A+ LF M + D IT++ ++ +
Sbjct: 367 SMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKF 426
Query: 317 GVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGAC 376
G + ++ GI ++D+ + G + +++ + SM + T++ AC
Sbjct: 427 GKGLHSNGIKS-GICIDLSVSNALIDMYAKCGEVGDSLKIFSSMG-TGDTVTWNTVISAC 484
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/406 (25%), Positives = 193/406 (47%), Gaps = 48/406 (11%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEK------IPEPNTVSY------NIMLACH 48
M V+ V+WNS++S ++ HG +E+A +++ + +P+ TVS N+++
Sbjct: 167 MPVRDLVSWNSLISGYSS-HGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQ 225
Query: 49 ---LHHFGV------------------------GSARAFFDRMEVKDTASWNTMISGYAQ 81
LH F + AR FD M+V+D+ S+NTMI GY +
Sbjct: 226 GQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLK 285
Query: 82 VGLMGEASMLFAVMPEKNCVSWSAMVSGYVACG---DLDAAVECF----YAAPVRSVITW 134
+ ++ E+ +F ++ + S ACG DL A + A V
Sbjct: 286 LEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVR 345
Query: 135 TAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAK 194
+I Y K G + +A +F M K V+WN++I+GY+++G + +KLFK M+ +
Sbjct: 346 NILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQ 405
Query: 195 PNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWEL 254
+ ++ ++ + L+ L+ GK +H KS + D + +LI MYAKCG++ ++ ++
Sbjct: 406 ADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKI 465
Query: 255 FVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLV 314
F + D V+WN +IS + G L + +MR + PD TF+ L C
Sbjct: 466 FSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAK 525
Query: 315 DLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSM 360
LG + ++R FG +++ + ++++ + G L + + + M
Sbjct: 526 RLGKEIHCCLLR-FGYESELQIGNALIEMYSKCGCLENSSRVFERM 570
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 153/318 (48%), Gaps = 11/318 (3%)
Query: 55 GSARAFFDRME-VKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYV-A 112
S+ + F R+ K+ WN++I +++ GL EA + + E + A
Sbjct: 56 ASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKA 115
Query: 113 CGDL------DAAVECFYAAPVRS-VITWTAMITGYMKFGRVESAERLFREMSLKTLVTW 165
C L D E S + A++ Y + G + A ++F EM ++ LV+W
Sbjct: 116 CAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSW 175
Query: 166 NAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCK 225
N++I+GY +G E+ L+++ + S P++ +++SVL NL ++ G+ +H K
Sbjct: 176 NSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALK 235
Query: 226 SPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHL 285
S ++S L++MY K +A +F ++ +D VS+N MI GY + E+++ +
Sbjct: 236 SGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRM 295
Query: 286 FDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLG 345
F E D KPD +T +VL AC H + L +N M++ G + ++D+
Sbjct: 296 FLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKA-GFVLESTVRNILIDVYA 353
Query: 346 RAGRLPEAVDLIKSMPFK 363
+ G + A D+ SM K
Sbjct: 354 KCGDMITARDVFNSMECK 371
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 102/182 (56%), Gaps = 1/182 (0%)
Query: 137 MITGYMKFGRVESAERLFREMS-LKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKP 195
+I Y F S+ +FR +S K + WN++I + +NG + L+ + + ES P
Sbjct: 45 LIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSP 104
Query: 196 NALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELF 255
+ + SV+ C+ L ++G V++ + SD G +L+ MY++ G L A ++F
Sbjct: 105 DKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVF 164
Query: 256 VQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVD 315
++P +D+VSWN++ISGY+ HG E+AL ++ E+++ + PD T +VL A + +V
Sbjct: 165 DEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVK 224
Query: 316 LG 317
G
Sbjct: 225 QG 226
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 390 bits (1001), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/529 (39%), Positives = 294/529 (55%), Gaps = 23/529 (4%)
Query: 57 ARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLF------AVMPE--------KNCVS 102
AR F+ M D +N+M GY++ E LF ++P+ K C
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 103 WSAMVSG-YVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKT 161
A+ G + C + ++ +V +I Y + V+SA +F +
Sbjct: 142 AKALEEGRQLHCLSMKLGLD-------DNVYVCPTLINMYTECEDVDSARCVFDRIVEPC 194
Query: 162 LVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQ 221
+V +NAMI GY R + L LF+ M KPN ++L SVL C+ L +L LGK +H+
Sbjct: 195 VVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHK 254
Query: 222 LVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEK 281
K T+LI M+AKCG L +A +F ++ KD +W+AMI YA HG EK
Sbjct: 255 YAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEK 314
Query: 282 ALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMV 341
++ +F+ MR + ++PD ITF+ +L AC+H G V+ G +YF+ MV FGI +HY MV
Sbjct: 315 SMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMV 374
Query: 342 DLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSAT 401
DLL RAG L +A + I +P P P ++ LL AC H NLDLAE ++ + ELD S
Sbjct: 375 DLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGG 434
Query: 402 GYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELAS 461
YV L+N+YA +WE+V +R+ MK+ K VK PG S IE+++ VHEF S D +
Sbjct: 435 DYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTK 494
Query: 462 IHXXXXXXXXXXXXAGYVPDLEFALH-DVGEELKEQLLLWHSEKLAIAYGLLKVPLGLPI 520
+H +GYVPD +H ++ ++ KE L +HSEKLAI +GLL P G I
Sbjct: 495 LHRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTI 554
Query: 521 RVFKNLRVCGDCHTAIKYISAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
RV KNLRVC DCH A K IS I GR++++RD RFHHF+DG CSC D+W
Sbjct: 555 RVVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 111/234 (47%), Gaps = 10/234 (4%)
Query: 54 VGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSG 109
V SAR FDR+ +N MI+GYA+ EA LF M K N ++ +++S
Sbjct: 180 VDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSS 239
Query: 110 YVACGDLDAAVECFYAAPVRSVITW----TAMITGYMKFGRVESAERLFREMSLKTLVTW 165
G LD A S + TA+I + K G ++ A +F +M K W
Sbjct: 240 CALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAW 299
Query: 166 NAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQ-VHQLVC 224
+AMI Y +G+AE + +F+ M +P+ ++ +L CS+ ++ G++ Q+V
Sbjct: 300 SAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVS 359
Query: 225 KSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDI-VSWNAMISGYAQHG 277
K + S++ + ++ G+L++A+E ++P + W +++ + H
Sbjct: 360 KFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHN 413
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 389 bits (998), Expect = e-108, Method: Compositional matrix adjust.
Identities = 221/526 (42%), Positives = 308/526 (58%), Gaps = 16/526 (3%)
Query: 60 FFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNC-VSWSAMVSGYVACGDLDA 118
F+ E++D SWN+MI Y Q +A L+ M K + + S A LD
Sbjct: 196 FYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDH 255
Query: 119 AV--ECFYAAPVRSVI-----TWTAMITGYMKFGRVE---SAERLFREMSLKTLVTWNAM 168
+ F+ +++ + +I Y K G + +E++F+E+ LV WN M
Sbjct: 256 LIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTM 315
Query: 169 IAGYVENGR-AEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSP 227
I+GY N +E+ +K F+ M G +P+ S V CSNLS+ KQ+H L KS
Sbjct: 316 ISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSH 375
Query: 228 LSSD-TTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLF 286
+ S+ + +LIS+Y K G+L++A +F ++P + VS+N MI GYAQHG G +AL L+
Sbjct: 376 IPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLY 435
Query: 287 DEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGR 346
M G+ P+ ITFVAVL AC H G VD G +YFN M F I+ + EHY+CM+DLLGR
Sbjct: 436 QRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGR 495
Query: 347 AGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQL 406
AG+L EA I +MP+KP + LLGACR HKN+ LAE AA L+ + P +AT YV L
Sbjct: 496 AGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVML 555
Query: 407 ANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIHXXX 466
AN+YA +WE +A +R+SM+ ++ K PG SWIE+ + H F + D HP + ++
Sbjct: 556 ANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYL 615
Query: 467 XXXXXXXXXAGYVPDLEFAL---HDVGEELKEQLLLWHSEKLAIAYGLLKVPLGLPIRVF 523
GYV D ++A+ + GE +E L HSEKLA+A+GL+ G + V
Sbjct: 616 EEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVV 675
Query: 524 KNLRVCGDCHTAIKYISAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
KNLR+CGDCH AIK++SA+ GREIIVRD RFH FKDG CSC DYW
Sbjct: 676 KNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 177/375 (47%), Gaps = 17/375 (4%)
Query: 3 VKSTVTWNSILSA----FAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSAR 58
VKS V ++ LS K G AR F EPN SYN+++ + + AR
Sbjct: 35 VKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIAR 94
Query: 59 AFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMP----EKNCVSWSAMVSGYVACG 114
FD + DT S+NT+ISGYA A +LF M E + + S +++
Sbjct: 95 QLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRV 154
Query: 115 DLDAAVECFYAA---PVRSVITWTAMITGYMKFGRVESAERLFREMS-LKTLVTWNAMIA 170
DL + CF + S + A +T Y K G + A +F M L+ V+WN+MI
Sbjct: 155 DLIKQLHCFSVSGGFDSYSSVN-NAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIV 213
Query: 171 GYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSS 230
Y ++ L L+K M+ G K + +L SVL ++L L G+Q H + K+
Sbjct: 214 AYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQ 273
Query: 231 DTTAGTSLISMYAKCG---DLKEAWELFVQIPRKDIVSWNAMISGYAQHGA-GEKALHLF 286
++ G+ LI Y+KCG + ++ ++F +I D+V WN MISGY+ + E+A+ F
Sbjct: 274 NSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSF 333
Query: 287 DEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGR 346
+M+ G +PD +FV V AC++ Q + ++ + ++ L +
Sbjct: 334 RQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYK 393
Query: 347 AGRLPEAVDLIKSMP 361
+G L +A + MP
Sbjct: 394 SGNLQDARWVFDRMP 408
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 136/292 (46%), Gaps = 8/292 (2%)
Query: 107 VSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWN 166
V+ Y CG L A FY+ +V ++ ++ Y K ++ A +LF E+ V++N
Sbjct: 50 VNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYN 109
Query: 167 AMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKS 226
+I+GY + + LFK M + G + + +L+ ++ C + + L KQ+H
Sbjct: 110 TLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCD--RVDLIKQLHCFSVSG 167
Query: 227 PLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPR-KDIVSWNAMISGYAQHGAGEKALHL 285
S ++ + ++ Y+K G L+EA +F + +D VSWN+MI Y QH G KAL L
Sbjct: 168 GFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALAL 227
Query: 286 FDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLG 345
+ EM G K D T +VL A + G Q+ +++ G + ++D
Sbjct: 228 YKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKA-GFHQNSHVGSGLIDFYS 286
Query: 346 RAGRLPEAVDLIKSMP--FKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLEL 395
+ G D K P ++ T++ + N +L+E A K+ ++
Sbjct: 287 KCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSM--NEELSEEAVKSFRQM 336
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 69/176 (39%), Gaps = 34/176 (19%)
Query: 216 GKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKE------------------------- 250
GK +H L KS ++S T +++Y+KCG L
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86
Query: 251 ------AWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAV 304
A +LF +IP+ D VS+N +ISGYA A+ LF MR G + D T +
Sbjct: 87 DSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGL 146
Query: 305 LLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSM 360
+ AC VDL Q V G + V + G L EAV + M
Sbjct: 147 IAAC--CDRVDLIKQLHCFSVSG-GFDSYSSVNNAFVTYYSKGGLLREAVSVFYGM 199
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 66/149 (44%), Gaps = 10/149 (6%)
Query: 33 IPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLF 92
IP N +++ + + AR FDRM + S+N MI GYAQ G EA +L+
Sbjct: 376 IPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLY 435
Query: 93 AVMPEK----NCVSWSAMVSGYVACGDLDAAVECFYAAPVRSVIT-----WTAMITGYMK 143
M + N +++ A++S CG +D E F I ++ MI +
Sbjct: 436 QRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGR 495
Query: 144 FGRVESAERLFREMSLKT-LVTWNAMIAG 171
G++E AER M K V W A++
Sbjct: 496 AGKLEEAERFIDAMPYKPGSVAWAALLGA 524
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 388 bits (996), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/609 (35%), Positives = 329/609 (54%), Gaps = 45/609 (7%)
Query: 5 STVTWNSILSAFAKKHGNFEQARQLFEKIP----EPNTVSYNIMLACHLHHFGVGSARAF 60
++VT ++SA AK + E +++ I E N + + ++ ++ + A+
Sbjct: 235 NSVTMVCVISACAKLE-DLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRL 293
Query: 61 FDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPE----------------------- 97
FD + N M S Y + GL EA +F +M +
Sbjct: 294 FDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNI 353
Query: 98 ---KNC---------VSW----SAMVSGYVACGDLDAAVECFYAAPVRSVITWTAMITGY 141
K+C SW +A++ Y+ C D A F ++V+TW +++ GY
Sbjct: 354 LWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGY 413
Query: 142 MKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSML-ESGAKPNALSL 200
++ G V++A F M K +V+WN +I+G V+ E+ +++F SM + G + +++
Sbjct: 414 VENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTM 473
Query: 201 TSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPR 260
S+ C +L AL L K ++ + K+ + D GT+L+ M+++CGD + A +F +
Sbjct: 474 MSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTN 533
Query: 261 KDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQY 320
+D+ +W A I A G E+A+ LFD+M G+KPD + FV L AC+H GLV G +
Sbjct: 534 RDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEI 593
Query: 321 FNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHK 380
F M++ G+ + HY CMVDLLGRAG L EAV LI+ MP +P+ I+ +LL ACR+
Sbjct: 594 FYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQG 653
Query: 381 NLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWI 440
N+++A +AA+ + L P YV L+NVYA+ RW +A++R SMKE + K PG S I
Sbjct: 654 NVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSI 713
Query: 441 EISSEVHEFRSSDRLHPELASIHXXXXXXXXXXXXAGYVPDLEFALHDVGEELKEQLLLW 500
+I + HEF S D HPE+ +I G+VPDL L DV E+ K +L
Sbjct: 714 QIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSR 773
Query: 501 HSEKLAIAYGLLKVPLGLPIRVFKNLRVCGDCHTAIKYISAIEGREIIVRDTTRFHHFKD 560
HSEKLA+AYGL+ G IR+ KNLRVC DCH+ K+ S + REII+RD RFH+ +
Sbjct: 774 HSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQ 833
Query: 561 GFCSCSDYW 569
G CSC D+W
Sbjct: 834 GKCSCGDFW 842
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 153/347 (44%), Gaps = 44/347 (12%)
Query: 56 SARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEK-----NCVSWSAMVSGY 110
SAR FD M ++ SW +MI GYA+ +A LF M N V+ ++S
Sbjct: 187 SARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISAC 246
Query: 111 VACGDLDAAVECFYAAPVRSVI-----TWTAMITGYMKFGRVESAERLFREMSLKTLVTW 165
DL+ E YA S I +A++ YMK ++ A+RLF E L
Sbjct: 247 AKLEDLETG-EKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLC 305
Query: 166 NAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCK 225
NAM + YV G + L +F M++SG +P+ +S+ S + CS L + GK H V +
Sbjct: 306 NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLR 365
Query: 226 SPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHL 285
+ S +LI MY KC A+ +F ++ K +V+WN++++GY ++G + A
Sbjct: 366 NGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWET 425
Query: 286 FDEM--------------------------------RHDGMKPDWITFVAVLLACNHAGL 313
F+ M +G+ D +T +++ AC H G
Sbjct: 426 FETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGA 485
Query: 314 VDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSM 360
+DL ++ + GI+ +VD+ R G A+ + S+
Sbjct: 486 LDLA-KWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL 531
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 135/272 (49%), Gaps = 26/272 (9%)
Query: 57 ARAFFDRMEVKDTA-SWNTMISGYAQVGLMGEASMLFAVM------PEKNCVSWSAMVSG 109
A+ F+ E T +N++I GYA GL EA +LF M P+K + G
Sbjct: 86 AKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPF-----G 140
Query: 110 YVACGDLDAA----------VECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSL 159
AC A V+ YA + + +++ Y + G ++SA ++F EMS
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYA---KDLFVQNSLVHFYAECGELDSARKVFDEMSE 197
Query: 160 KTLVTWNAMIAGYVENGRAEDGLKLFKSML-ESGAKPNALSLTSVLLGCSNLSALQLGKQ 218
+ +V+W +MI GY A+D + LF M+ + PN++++ V+ C+ L L+ G++
Sbjct: 198 RNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEK 257
Query: 219 VHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGA 278
V+ + S + + ++L+ MY KC + A LF + ++ NAM S Y + G
Sbjct: 258 VYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGL 317
Query: 279 GEKALHLFDEMRHDGMKPDWITFVAVLLACNH 310
+AL +F+ M G++PD I+ ++ + +C+
Sbjct: 318 TREALGVFNLMMDSGVRPDRISMLSAISSCSQ 349
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 127/266 (47%), Gaps = 23/266 (8%)
Query: 131 VITWTAMITGYMKFGRVES---AERLFREM-SLKTLVTWNAMIAGYVENGRAEDGLKLFK 186
V T T ++ + G ES A+ +F S T +N++I GY +G + + LF
Sbjct: 64 VSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFL 123
Query: 187 SMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCG 246
M+ SG P+ + L C+ A G Q+H L+ K + D SL+ YA+CG
Sbjct: 124 RMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECG 183
Query: 247 DLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEM-RHDGMKPDWITFVAVL 305
+L A ++F ++ +++VSW +MI GYA+ + A+ LF M R + + P+ +T V V+
Sbjct: 184 ELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVI 243
Query: 306 LACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPH 365
AC ++ G + + +R+ GI+ + +VD+ + A+D+ K + F +
Sbjct: 244 SACAKLEDLETGEKVY-AFIRNSGIEVNDLMVSALVDMYMKCN----AIDVAKRL-FDEY 297
Query: 366 PAIFGTLLGACRIHKNLDLAEFAAKN 391
A NLDL A N
Sbjct: 298 GA------------SNLDLCNAMASN 311
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 135/301 (44%), Gaps = 43/301 (14%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAF 60
M K+ VTWNSI++ + ++G + A + FE +PE N V
Sbjct: 398 MSNKTVVTWNSIVAGYV-ENGEVDAAWETFETMPEKNIV--------------------- 435
Query: 61 FDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSA--MVSGYVACGD--- 115
SWNT+ISG Q L EA +F M + V+ M+S ACG
Sbjct: 436 ----------SWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGA 485
Query: 116 LDAAVECFYAAPVR----SVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAG 171
LD A +Y V T ++ + + G ESA +F ++ + + W A I
Sbjct: 486 LDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGA 545
Query: 172 YVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQV-HQLVCKSPLSS 230
G AE ++LF M+E G KP+ ++ L CS+ +Q GK++ + ++ +S
Sbjct: 546 MAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSP 605
Query: 231 DTTAGTSLISMYAKCGDLKEAWELFVQIPRK-DIVSWNAMISGYAQHGAGEKALHLFDEM 289
+ ++ + + G L+EA +L +P + + V WN++++ G E A + +++
Sbjct: 606 EDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKI 665
Query: 290 R 290
+
Sbjct: 666 Q 666
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 387 bits (993), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/470 (39%), Positives = 284/470 (60%), Gaps = 4/470 (0%)
Query: 104 SAMVSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLV 163
+ M+ YV C +D A + F P R VI+WT +I Y + G +E A LF + K +V
Sbjct: 188 NTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMV 247
Query: 164 TWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLV 223
W AM+ G+ +N + ++ L+ F M +SG + + +++ + C+ L A + + Q+
Sbjct: 248 AWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIA 307
Query: 224 CKSPLS-SD-TTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEK 281
KS S SD G++LI MY+KCG+++EA +F+ + K++ ++++MI G A HG ++
Sbjct: 308 QKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQE 367
Query: 282 ALHLFDEM-RHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACM 340
ALHLF M +KP+ +TFV L+AC+H+GLVD G Q F+ M + FG++ +HY CM
Sbjct: 368 ALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCM 427
Query: 341 VDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSA 400
VDLLGR GRL EA++LIK+M +PH ++G LLGACRIH N ++AE AA++L EL+P
Sbjct: 428 VDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDII 487
Query: 401 TGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSW-IEISSEVHEFRSSDRLHPEL 459
Y+ L+NVYA+ W V R+R+ +KE + K P SW ++ + ++H+F + HP
Sbjct: 488 GNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMS 547
Query: 460 ASIHXXXXXXXXXXXXAGYVPDLEFALHDVGEELKEQLLLWHSEKLAIAYGLLKVPLGLP 519
I GY PDL +DV + K +L+ H+EKLA+A+ LL
Sbjct: 548 NKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEKLALAFSLLTTNRDST 607
Query: 520 IRVFKNLRVCGDCHTAIKYISAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
I + KNLR+C DCH ++ S + G+ II+RD RFHHF+ G CSC D+W
Sbjct: 608 ITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCSCGDFW 657
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 166/348 (47%), Gaps = 36/348 (10%)
Query: 10 NSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDT 69
N+++ + K + + AR++F+++PE + +S+ ++A + + A F+ + KD
Sbjct: 188 NTMIDMYVKCE-SIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDM 246
Query: 70 ASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYV-ACGDL------DAAVEC 122
+W M++G+AQ EA F M + + V+GY+ AC L D AV+
Sbjct: 247 VAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQI 306
Query: 123 FYA---APVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAE 179
+P V+ +A+I Y K G VE A +F M+ K + T+++MI G +GRA+
Sbjct: 307 AQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQ 366
Query: 180 DGLKLFKSML-ESGAKPNALSLTSVLLGCSNLSALQLGKQV----HQLVCKSPLSSDTTA 234
+ L LF M+ ++ KPN ++ L+ CS+ + G+QV +Q P T
Sbjct: 367 EALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTC 426
Query: 235 GTSLISMYAKCGDLKEAWELFVQI---PRKDIVSWNAMISGYAQHGAGE----KALHLFD 287
++ + + G L+EA EL + P + W A++ H E A HLF+
Sbjct: 427 ---MVDLLGRTGRLQEALELIKTMSVEPHGGV--WGALLGACRIHNNPEIAEIAAEHLFE 481
Query: 288 EMRHDGMKPDWITFVAVLLACNHAGLVDL-GVQYFNMMVRDFGIKTKP 334
++PD I +LL+ +A D GV ++++ G+K P
Sbjct: 482 ------LEPDIIGNY-ILLSNVYASAGDWGGVLRVRKLIKEKGLKKTP 522
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 125/292 (42%), Gaps = 46/292 (15%)
Query: 150 AERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSN 209
A R+ + + W A+I GY G+ ++ + ++ M + P + + +++L C
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 210 LSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKC------------------------ 245
+ L LG+Q H + G ++I MY KC
Sbjct: 162 MKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTEL 221
Query: 246 -------GDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDW 298
G+++ A ELF +P KD+V+W AM++G+AQ+ ++AL FD M G++ D
Sbjct: 222 IAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADE 281
Query: 299 ITFVAVLLACNHAG---LVDLGVQYFNMMVRDFGIKTKPEHY---ACMVDLLGRAGRLPE 352
+T + AC G D VQ + + G + +H + ++D+ + G + E
Sbjct: 282 VTVAGYISACAQLGASKYADRAVQ----IAQKSGY-SPSDHVVIGSALIDMYSKCGNVEE 336
Query: 353 AVDLIKSMPFKPHPAIFGTLLGAC---RIHKNLDLAEFAAKNLLELDPSSAT 401
AV++ SM K +LG R + L L + E+ P++ T
Sbjct: 337 AVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQ-TEIKPNTVT 387
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 385 bits (990), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/527 (37%), Positives = 303/527 (57%), Gaps = 18/527 (3%)
Query: 57 ARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPE----KNCVSWSAMVSGYVA 112
AR FD M WNT+ GY + L E+ +L+ M + + ++ +V
Sbjct: 62 ARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQ 121
Query: 113 CGDLDAAVECFYAAPVRSV--------ITWTAMITGYMKFGRVESAERLFREMSLKTLVT 164
GD C +A V I T ++ YMKFG + SAE LF M +K LV
Sbjct: 122 LGDFS----CGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVA 177
Query: 165 WNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVC 224
WNA +A V+ G + L+ F M + ++ ++ S+L C L +L++G++++
Sbjct: 178 WNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRAR 237
Query: 225 KSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALH 284
K + + + + M+ KCG+ + A LF ++ ++++VSW+ MI GYA +G +AL
Sbjct: 238 KEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALT 297
Query: 285 LFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVR--DFGIKTKPEHYACMVD 342
LF M+++G++P+++TF+ VL AC+HAGLV+ G +YF++MV+ D ++ + EHYACMVD
Sbjct: 298 LFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVD 357
Query: 343 LLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATG 402
LLGR+G L EA + IK MP +P I+G LLGAC +H+++ L + A L+E P +
Sbjct: 358 LLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSY 417
Query: 403 YVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASI 462
+V L+N+YAA +W+ V ++R M++ K YS +E ++H F D+ HP+ +I
Sbjct: 418 HVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAI 477
Query: 463 HXXXXXXXXXXXXAGYVPDLEFALHDVGEELKEQLLLWHSEKLAIAYGLLKVPLGLPIRV 522
+ GYVPD HDV E KE L HSEKLAIA+GL+K G PIRV
Sbjct: 478 YEKLDEILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRV 537
Query: 523 FKNLRVCGDCHTAIKYISAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
KNLR C DCH K++S++ EII+RD RFHHF++G CSC ++W
Sbjct: 538 MKNLRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 91/188 (48%)
Query: 135 TAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAK 194
T ++ + G + A ++F EM + WN + GYV N + L L+K M + G +
Sbjct: 47 TQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVR 106
Query: 195 PNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWEL 254
P+ + V+ S L G +H V K T L+ MY K G+L A L
Sbjct: 107 PDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFL 166
Query: 255 FVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLV 314
F + KD+V+WNA ++ Q G AL F++M D ++ D T V++L AC G +
Sbjct: 167 FESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSL 226
Query: 315 DLGVQYFN 322
++G + ++
Sbjct: 227 EIGEEIYD 234
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 13/238 (5%)
Query: 52 FG-VGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVM----PEKNCVSWSAM 106
FG + SA F+ M+VKD +WN ++ Q G A F M + + + +M
Sbjct: 157 FGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSM 216
Query: 107 VSGYVACGDLDAAVECFYAAPVR----SVITWTAMITGYMKFGRVESAERLFREMSLKTL 162
+S G L+ E + A ++I A + ++K G E+A LF EM + +
Sbjct: 217 LSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNV 276
Query: 163 VTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQL 222
V+W+ MI GY NG + + L LF +M G +PN ++ VL CS+ + GK+ L
Sbjct: 277 VSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSL 336
Query: 223 VCKS---PLSSDTTAGTSLISMYAKCGDLKEAWELFVQIP-RKDIVSWNAMISGYAQH 276
+ +S L ++ + + G L+EA+E ++P D W A++ A H
Sbjct: 337 MVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVH 394
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 78/169 (46%), Gaps = 2/169 (1%)
Query: 195 PNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWEL 254
P + S LL S+ QL K++H +V ++ S + T L+ GD+ A ++
Sbjct: 7 PLTKQMLSELLRASSSKPKQL-KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQV 65
Query: 255 FVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLV 314
F ++ + I WN + GY ++ ++L L+ +MR G++PD T+ V+ A + G
Sbjct: 66 FDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDF 125
Query: 315 DLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFK 363
G +V+ +G +V + + G L A L +SM K
Sbjct: 126 SCGFALHAHVVK-YGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVK 173
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 384 bits (987), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/623 (33%), Positives = 319/623 (51%), Gaps = 61/623 (9%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSY----NIMLACH-------- 48
M K ++WNS++++F + + L I +V+Y + + AC
Sbjct: 322 MPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG 381
Query: 49 --LHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAM 106
LH V S F++++ N ++S Y ++G M E+ + MP ++ V+W+A+
Sbjct: 382 RILHGLVVVSG-LFYNQI------IGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNAL 434
Query: 107 VSGYVACGDLDAAVECFYAAPVRSVIT--------------------------------- 133
+ GY D D A+ F V V +
Sbjct: 435 IGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAG 494
Query: 134 -------WTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFK 186
++IT Y K G + S++ LF + + ++TWNAM+A +G E+ LKL
Sbjct: 495 FESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVS 554
Query: 187 SMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCG 246
M G + S + L + L+ L+ G+Q+H L K D+ + MY+KCG
Sbjct: 555 KMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCG 614
Query: 247 DLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLL 306
++ E ++ + + SWN +IS +HG E+ F EM G+KP +TFV++L
Sbjct: 615 EIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLT 674
Query: 307 ACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHP 366
AC+H GLVD G+ Y++M+ RDFG++ EH C++DLLGR+GRL EA I MP KP+
Sbjct: 675 ACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPND 734
Query: 367 AIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSM 426
++ +LL +C+IH NLD AA+NL +L+P + YV +N++A RWE V +R+ M
Sbjct: 735 LVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQM 794
Query: 427 KENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIHXXXXXXXXXXXXAGYVPDLEFAL 486
+ K SW+++ +V F DR HP+ I+ +GYV D AL
Sbjct: 795 GFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQAL 854
Query: 487 HDVGEELKEQLLLWHSEKLAIAYGLLKVPLGLPIRVFKNLRVCGDCHTAIKYISAIEGRE 546
D EE KE L HSE+LA+AY L+ P G +R+FKNLR+C DCH+ K++S + GR
Sbjct: 855 QDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRR 914
Query: 547 IIVRDTTRFHHFKDGFCSCSDYW 569
I++RD RFHHF+ G CSC DYW
Sbjct: 915 IVLRDQYRFHHFERGLCSCKDYW 937
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 167/316 (52%), Gaps = 10/316 (3%)
Query: 54 VGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVM----PEKNCVSWSAMVS- 108
V A FD+M +DT SWN++ + YAQ G + E+ +F++M E N + S ++S
Sbjct: 211 VDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSV 270
Query: 109 -GYVACGDLDAAVECFYAA-PVRSVI-TWTAMITGYMKFGRVESAERLFREMSLKTLVTW 165
G+V + SV+ ++ Y GR A +F++M K L++W
Sbjct: 271 LGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISW 330
Query: 166 NAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCK 225
N+++A +V +GR+ D L L SM+ SG N ++ TS L C + G+ +H LV
Sbjct: 331 NSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVV 390
Query: 226 SPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHL 285
S L + G +L+SMY K G++ E+ + +Q+PR+D+V+WNA+I GYA+ +KAL
Sbjct: 391 SGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAA 450
Query: 286 FDEMRHDGMKPDWITFVAVLLACNHAG-LVDLGVQYFNMMVRDFGIKTKPEHYACMVDLL 344
F MR +G+ ++IT V+VL AC G L++ G + + + G ++ ++ +
Sbjct: 451 FQTMRVEGVSSNYITVVSVLSACLLPGDLLERG-KPLHAYIVSAGFESDEHVKNSLITMY 509
Query: 345 GRAGRLPEAVDLIKSM 360
+ G L + DL +
Sbjct: 510 AKCGDLSSSQDLFNGL 525
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/420 (27%), Positives = 203/420 (48%), Gaps = 67/420 (15%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKI----PEPNTVSYNIMLAC--HLHHFGV 54
M + T++WNSI +A+A ++G+ E++ ++F + E N+ + + +L+ H+ H
Sbjct: 221 MSERDTISWNSIAAAYA-QNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKW 279
Query: 55 GSA------RAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVS 108
G + FD + NT++ YA G EA+++F MP K+ +SW+++++
Sbjct: 280 GRGIHGLVVKMGFDSV----VCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMA 335
Query: 109 GYVACG-DLDA-AVECFYAAPVRSV--ITWT----------------------------- 135
+V G LDA + C + +SV +T+T
Sbjct: 336 SFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFY 395
Query: 136 ------AMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSML 189
A+++ Y K G + + R+ +M + +V WNA+I GY E+ + L F++M
Sbjct: 396 NQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMR 455
Query: 190 ESGAKPNALSLTSVLLGC---SNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCG 246
G N +++ SVL C +L L+ GK +H + + SD SLI+MYAKCG
Sbjct: 456 VEGVSSNYITVVSVLSACLLPGDL--LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCG 513
Query: 247 DLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLL 306
DL + +LF + ++I++WNAM++ A HG GE+ L L +MR G+ D +F L
Sbjct: 514 DLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLS 573
Query: 307 ACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLI-----KSMP 361
A +++ G Q + V+ G + + D+ + G + E V ++ +S+P
Sbjct: 574 AAAKLAVLEEGQQLHGLAVK-LGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLP 632
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 159/329 (48%), Gaps = 25/329 (7%)
Query: 52 FG-VGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGY 110
FG V AR FD M V++ SWNTM+SG +VGL E F M + S +++
Sbjct: 5 FGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASL 64
Query: 111 V-ACGDLDA------AVECFYAAP--VRSVITWTAMITGYMKFGRVESAERLFREMSLKT 161
V ACG + V F A + V TA++ Y +G V + ++F EM +
Sbjct: 65 VTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRN 124
Query: 162 LVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQ 221
+V+W +++ GY + G E+ + ++K M G N S++ V+ C L LG+Q+
Sbjct: 125 VVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIG 184
Query: 222 LVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEK 281
V KS L S SLISM G++ A +F Q+ +D +SWN++ + YAQ+G E+
Sbjct: 185 QVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEE 244
Query: 282 ALHLFDEMR--HDGMKPDWI-TFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYA 338
+ +F MR HD + + T ++VL +H Q + + +K +
Sbjct: 245 SFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDH--------QKWGRGIHGLVVKMGFDSVV 296
Query: 339 CMVDLLGR----AGRLPEAVDLIKSMPFK 363
C+ + L R AGR EA + K MP K
Sbjct: 297 CVCNTLLRMYAGAGRSVEANLVFKQMPTK 325
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 100/461 (21%), Positives = 206/461 (44%), Gaps = 55/461 (11%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAF 60
M V++ V+WN+++S + G + + + F K+ + + ++A + G S F
Sbjct: 18 MPVRNEVSWNTMMSGIVRV-GLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGR-SGSMF 75
Query: 61 FDRMEVKDTASWNTMISG----------YAQVGLMGEASMLFAVMPEKNCVSWSAMVSGY 110
+ ++V + + ++S Y GL+ + +F MP++N VSW++++ GY
Sbjct: 76 REGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGY 135
Query: 111 VACGDLDAAVECFYA--------------------------APVRSVI------------ 132
G+ + ++ + + R +I
Sbjct: 136 SDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKL 195
Query: 133 -TWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLES 191
++I+ G V+ A +F +MS + ++WN++ A Y +NG E+ ++F M
Sbjct: 196 AVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRF 255
Query: 192 GAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEA 251
+ N+ +++++L ++ + G+ +H LV K S +L+ MYA G EA
Sbjct: 256 HDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEA 315
Query: 252 WELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHA 311
+F Q+P KD++SWN++++ + G AL L M G +++TF + L AC
Sbjct: 316 NLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTP 375
Query: 312 GLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGT 371
+ G + + +V G+ +V + G+ G + E+ ++ MP + A +
Sbjct: 376 DFFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVA-WNA 433
Query: 372 LLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAA 412
L+G ++ D A AA + ++ S+ Y+ + +V +A
Sbjct: 434 LIGGYAEDEDPDKA-LAAFQTMRVEGVSSN-YITVVSVLSA 472
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 118/221 (53%), Gaps = 2/221 (0%)
Query: 141 YMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSL 200
Y KFGRV+ A LF M ++ V+WN M++G V G +G++ F+ M + G KP++ +
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 201 TSVLLGCSNL-SALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIP 259
S++ C S + G QVH V KS L SD T+++ +Y G + + ++F ++P
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121
Query: 260 RKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQ 319
+++VSW +++ GY+ G E+ + ++ MR +G+ + + V+ +C LG Q
Sbjct: 122 DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQ 181
Query: 320 YFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSM 360
+V+ G+++K ++ +LG G + A + M
Sbjct: 182 IIGQVVKS-GLESKLAVENSLISMLGSMGNVDYANYIFDQM 221
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 2/122 (1%)
Query: 241 MYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWIT 300
MY K G +K A LF +P ++ VSWN M+SG + G + + F +M G+KP
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 301 FVAVLLACNHAG-LVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKS 359
+++ AC +G + GVQ + + G+ + ++ L G G + + + +
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKS-GLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 119
Query: 360 MP 361
MP
Sbjct: 120 MP 121
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 383 bits (984), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/439 (43%), Positives = 279/439 (63%), Gaps = 1/439 (0%)
Query: 131 VITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLE 190
V ++++ Y K G + A ++F EM + +VTW+ M+ GY + G E+ L LFK L
Sbjct: 151 VFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALF 210
Query: 191 SGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKE 250
N S +SV+ C+N + L+LG+Q+H L KS S + G+SL+S+Y+KCG +
Sbjct: 211 ENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEG 270
Query: 251 AWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNH 310
A+++F ++P K++ WNAM+ YAQH +K + LF M+ GMKP++ITF+ VL AC+H
Sbjct: 271 AYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSH 330
Query: 311 AGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFG 370
AGLVD G YF+ M ++ I+ +HYA +VD+LGRAGRL EA+++I +MP P +++G
Sbjct: 331 AGLVDEGRYYFDQM-KESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWG 389
Query: 371 TLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENK 430
LL +C +HKN +LA FAA + EL P S+ ++ L+N YAA R+E A+ R+ +++
Sbjct: 390 ALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRG 449
Query: 431 VVKAPGYSWIEISSEVHEFRSSDRLHPELASIHXXXXXXXXXXXXAGYVPDLEFALHDVG 490
K G SW+E ++VH F + +R H + I+ AGY+ D + L +V
Sbjct: 450 EKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVD 509
Query: 491 EELKEQLLLWHSEKLAIAYGLLKVPLGLPIRVFKNLRVCGDCHTAIKYISAIEGREIIVR 550
+ K Q + +HSE+LAIA+GL+ P PIRV KNLRVCGDCH AIK++S R IIVR
Sbjct: 510 GDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVR 569
Query: 551 DTTRFHHFKDGFCSCSDYW 569
D RFH F+DG CSC+DYW
Sbjct: 570 DNNRFHRFEDGKCSCNDYW 588
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 103/183 (56%)
Query: 137 MITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPN 196
+I Y K + R F + K+ TW+++I+ + +N L+ K M+ +P+
Sbjct: 56 LINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPD 115
Query: 197 ALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFV 256
L S C+ LS +G+ VH L K+ +D G+SL+ MYAKCG++ A ++F
Sbjct: 116 DHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFD 175
Query: 257 QIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDL 316
++P++++V+W+ M+ GYAQ G E+AL LF E + + + +F +V+ C ++ L++L
Sbjct: 176 EMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLEL 235
Query: 317 GVQ 319
G Q
Sbjct: 236 GRQ 238
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 383 bits (984), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/608 (35%), Positives = 328/608 (53%), Gaps = 45/608 (7%)
Query: 5 STVTWNSILSAFAKKHGNFEQARQLFEKIP----EPNTVSYNIMLACHLHHFGVGSARAF 60
++VT ++SA AK + E +++ I E N + + ++ ++ + A+
Sbjct: 235 NSVTMVCVISACAKLE-DLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRL 293
Query: 61 FDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPE----------------------- 97
FD + N M S Y + GL EA +F +M +
Sbjct: 294 FDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNI 353
Query: 98 ---KNC---------VSW----SAMVSGYVACGDLDAAVECFYAAPVRSVITWTAMITGY 141
K+C SW +A++ Y+ C D A F ++V+TW +++ GY
Sbjct: 354 LWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGY 413
Query: 142 MKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSML-ESGAKPNALSL 200
++ G V++A F M K +V+WN +I+G V+ E+ +++F SM + G + +++
Sbjct: 414 VENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTM 473
Query: 201 TSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPR 260
S+ C +L AL L K ++ + K+ + D GT+L+ M+++CGD + A +F +
Sbjct: 474 MSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTN 533
Query: 261 KDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQY 320
+D+ +W A I A G E+A+ LFD+M G+KPD + FV L AC+H GLV G +
Sbjct: 534 RDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEI 593
Query: 321 FNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHK 380
F M++ G+ + HY CMVDLLGRAG L EAV LI+ MP +P+ I+ +LL ACR+
Sbjct: 594 FYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQG 653
Query: 381 NLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWI 440
N+++A +AA+ + L P YV L+NVYA+ RW +A++R SMKE + K PG S I
Sbjct: 654 NVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSI 713
Query: 441 EISSEVHEFRSSDRLHPELASIHXXXXXXXXXXXXAGYVPDLEFALHDVGEELKEQLLLW 500
+I + HEF S D HPE+ +I G+VPDL L DV E+ K +L
Sbjct: 714 QIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSR 773
Query: 501 HSEKLAIAYGLLKVPLGLPIRVFKNLRVCGDCHTAIKYISAIEGREIIVRDTTRFHHFKD 560
HSEKLA+AYGL+ G IR+ KNLRVC DCH+ K+ S + REII+RD RFH+ +
Sbjct: 774 HSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQ 833
Query: 561 GFCSCSDY 568
G CSC D+
Sbjct: 834 GKCSCGDF 841
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 153/347 (44%), Gaps = 44/347 (12%)
Query: 56 SARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEK-----NCVSWSAMVSGY 110
SAR FD M ++ SW +MI GYA+ +A LF M N V+ ++S
Sbjct: 187 SARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISAC 246
Query: 111 VACGDLDAAVECFYAAPVRSVITW-----TAMITGYMKFGRVESAERLFREMSLKTLVTW 165
DL+ E YA S I +A++ YMK ++ A+RLF E L
Sbjct: 247 AKLEDLETG-EKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLC 305
Query: 166 NAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCK 225
NAM + YV G + L +F M++SG +P+ +S+ S + CS L + GK H V +
Sbjct: 306 NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLR 365
Query: 226 SPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHL 285
+ S +LI MY KC A+ +F ++ K +V+WN++++GY ++G + A
Sbjct: 366 NGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWET 425
Query: 286 FDEM--------------------------------RHDGMKPDWITFVAVLLACNHAGL 313
F+ M +G+ D +T +++ AC H G
Sbjct: 426 FETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGA 485
Query: 314 VDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSM 360
+DL ++ + GI+ +VD+ R G A+ + S+
Sbjct: 486 LDLA-KWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL 531
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 135/272 (49%), Gaps = 26/272 (9%)
Query: 57 ARAFFDRMEVKDTA-SWNTMISGYAQVGLMGEASMLFAVM------PEKNCVSWSAMVSG 109
A+ F+ E T +N++I GYA GL EA +LF M P+K + G
Sbjct: 86 AKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPF-----G 140
Query: 110 YVACGDLDAA----------VECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSL 159
AC A V+ YA + + +++ Y + G ++SA ++F EMS
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYA---KDLFVQNSLVHFYAECGELDSARKVFDEMSE 197
Query: 160 KTLVTWNAMIAGYVENGRAEDGLKLFKSML-ESGAKPNALSLTSVLLGCSNLSALQLGKQ 218
+ +V+W +MI GY A+D + LF M+ + PN++++ V+ C+ L L+ G++
Sbjct: 198 RNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEK 257
Query: 219 VHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGA 278
V+ + S + + ++L+ MY KC + A LF + ++ NAM S Y + G
Sbjct: 258 VYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGL 317
Query: 279 GEKALHLFDEMRHDGMKPDWITFVAVLLACNH 310
+AL +F+ M G++PD I+ ++ + +C+
Sbjct: 318 TREALGVFNLMMDSGVRPDRISMLSAISSCSQ 349
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 127/266 (47%), Gaps = 23/266 (8%)
Query: 131 VITWTAMITGYMKFGRVES---AERLFREM-SLKTLVTWNAMIAGYVENGRAEDGLKLFK 186
V T T ++ + G ES A+ +F S T +N++I GY +G + + LF
Sbjct: 64 VSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFL 123
Query: 187 SMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCG 246
M+ SG P+ + L C+ A G Q+H L+ K + D SL+ YA+CG
Sbjct: 124 RMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECG 183
Query: 247 DLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEM-RHDGMKPDWITFVAVL 305
+L A ++F ++ +++VSW +MI GYA+ + A+ LF M R + + P+ +T V V+
Sbjct: 184 ELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVI 243
Query: 306 LACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPH 365
AC ++ G + + +R+ GI+ + +VD+ + A+D+ K + F +
Sbjct: 244 SACAKLEDLETGEKVY-AFIRNSGIEVNDLMVSALVDMYMKCN----AIDVAKRL-FDEY 297
Query: 366 PAIFGTLLGACRIHKNLDLAEFAAKN 391
A NLDL A N
Sbjct: 298 GA------------SNLDLCNAMASN 311
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 135/301 (44%), Gaps = 43/301 (14%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAF 60
M K+ VTWNSI++ + ++G + A + FE +PE N V
Sbjct: 398 MSNKTVVTWNSIVAGYV-ENGEVDAAWETFETMPEKNIV--------------------- 435
Query: 61 FDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSA--MVSGYVACGD--- 115
SWNT+ISG Q L EA +F M + V+ M+S ACG
Sbjct: 436 ----------SWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGA 485
Query: 116 LDAAVECFYAAPVR----SVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAG 171
LD A +Y V T ++ + + G ESA +F ++ + + W A I
Sbjct: 486 LDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGA 545
Query: 172 YVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQV-HQLVCKSPLSS 230
G AE ++LF M+E G KP+ ++ L CS+ +Q GK++ + ++ +S
Sbjct: 546 MAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSP 605
Query: 231 DTTAGTSLISMYAKCGDLKEAWELFVQIPRK-DIVSWNAMISGYAQHGAGEKALHLFDEM 289
+ ++ + + G L+EA +L +P + + V WN++++ G E A + +++
Sbjct: 606 EDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKI 665
Query: 290 R 290
+
Sbjct: 666 Q 666
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 383 bits (983), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/615 (34%), Positives = 324/615 (52%), Gaps = 49/615 (7%)
Query: 4 KSTVTWNSILSAFAKK---HGNFEQARQLF---EKIPEPNTVSYNIMLACHLHHF--GVG 55
K+ V+WN+++ F+ + HG F+ RQ+ E + N + C F +
Sbjct: 356 KNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLK 415
Query: 56 SARAFFDRME-VKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACG 114
+ + E V + N ++ YA+ G + A +F + K SW+A++ G+
Sbjct: 416 ELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSN 475
Query: 115 D----LDAAVECFYAAPV-----------------------------------RSVITWT 135
D LDA ++ + + R + +
Sbjct: 476 DPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYL 535
Query: 136 AMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKP 195
++++ Y+ G + + + LF M K+LV+WN +I GY++NG + L +F+ M+ G +
Sbjct: 536 SVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQL 595
Query: 196 NALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELF 255
+S+ V CS L +L+LG++ H K L D SLI MYAK G + ++ ++F
Sbjct: 596 CGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVF 655
Query: 256 VQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVD 315
+ K SWNAMI GY HG ++A+ LF+EM+ G PD +TF+ VL ACNH+GL+
Sbjct: 656 NGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIH 715
Query: 316 LGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLI-KSMPFKPHPAIFGTLLG 374
G++Y + M FG+K +HYAC++D+LGRAG+L +A+ ++ + M + I+ +LL
Sbjct: 716 EGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLS 775
Query: 375 ACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKA 434
+CRIH+NL++ E A L EL+P YV L+N+YA +WE V ++R+ M E + K
Sbjct: 776 SCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKD 835
Query: 435 PGYSWIEISSEVHEFRSSDRLHPELASIHXXXXXXXXXXXXAGYVPDLEFALHDVGEELK 494
G SWIE++ +V F +R I GY PD HD+ EE K
Sbjct: 836 AGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEK 895
Query: 495 EQLLLWHSEKLAIAYGLLKVPLGLPIRVFKNLRVCGDCHTAIKYISAIEGREIIVRDTTR 554
+ L HSEKLA+ YGL+K G IRV+KNLR+C DCH A K IS + REI+VRD R
Sbjct: 896 IEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKR 955
Query: 555 FHHFKDGFCSCSDYW 569
FHHFK+G CSC DYW
Sbjct: 956 FHHFKNGVCSCGDYW 970
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 171/363 (47%), Gaps = 56/363 (15%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPN----------TVSYNIMLACHLH 50
M ++ V+WNS++ F+ +G E++ L ++ E N T+ + +
Sbjct: 248 MPERNLVSWNSMIRVFSD-NGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARER 306
Query: 51 HFGVGSAR---AFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMV 107
G+G A R++ K+ N ++ Y++ G + A M+F + KN VSW+ MV
Sbjct: 307 EIGLGKGVHGWAVKLRLD-KELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMV 365
Query: 108 SGYVACGD-------------------------LDAAVECFYAAPVRSV----------- 131
G+ A GD L+A CF+ + + S+
Sbjct: 366 GGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQE 425
Query: 132 -----ITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFK 186
+ A + Y K G + A+R+F + KT+ +WNA+I G+ ++ L
Sbjct: 426 FVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHL 485
Query: 187 SMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCG 246
M SG P++ ++ S+L CS L +L+LGK+VH + ++ L D S++S+Y CG
Sbjct: 486 QMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCG 545
Query: 247 DLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLL 306
+L LF + K +VSWN +I+GY Q+G ++AL +F +M G++ I+ + V
Sbjct: 546 ELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFG 605
Query: 307 ACN 309
AC+
Sbjct: 606 ACS 608
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 165/380 (43%), Gaps = 53/380 (13%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIPE----PNTVSYN-IMLACH-LHHFGV 54
++ K+ WN+++S++++ E E I P+ +Y ++ AC + G+
Sbjct: 146 LRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGI 205
Query: 55 GSA--RAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMV----- 107
G A V+D N ++S Y G + +A LF +MPE+N VSW++M+
Sbjct: 206 GLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSD 265
Query: 108 -----SGYVACGDL-----DAAVECFYAAPV----------------------------R 129
++ G++ D A A V +
Sbjct: 266 NGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDK 325
Query: 130 SVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSML 189
++ A++ Y K G + +A+ +F+ + K +V+WN M+ G+ G + + ML
Sbjct: 326 ELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQML 385
Query: 190 ESG--AKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGD 247
G K + +++ + + C + S L K++H K + + ++ YAKCG
Sbjct: 386 AGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGS 445
Query: 248 LKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLA 307
L A +F I K + SWNA+I G+AQ +L +M+ G+ PD T ++L A
Sbjct: 446 LSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSA 505
Query: 308 CNHAGLVDLGVQYFNMMVRD 327
C+ + LG + ++R+
Sbjct: 506 CSKLKSLRLGKEVHGFIIRN 525
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 119/273 (43%), Gaps = 15/273 (5%)
Query: 57 ARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCV-----SWSAMVSGYV 111
+R FD + K+ WN +IS Y++ L E F M + ++ ++
Sbjct: 139 SRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACA 198
Query: 112 ACGDLDAAVEC----FYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNA 167
D+ + V V A+++ Y G V A +LF M + LV+WN+
Sbjct: 199 GMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNS 258
Query: 168 MIAGYVENGRAEDGLKLFKSMLESGAK----PNALSLTSVLLGCSNLSALQLGKQVHQLV 223
MI + +NG +E+ L M+E P+ +L +VL C+ + LGK VH
Sbjct: 259 MIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWA 318
Query: 224 CKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKAL 283
K L + +L+ MY+KCG + A +F K++VSWN M+ G++ G
Sbjct: 319 VKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTF 378
Query: 284 HLFDEMRHDG--MKPDWITFVAVLLACNHAGLV 314
+ +M G +K D +T + + C H +
Sbjct: 379 DVLRQMLAGGEDVKADEVTILNAVPVCFHESFL 411
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 95/188 (50%), Gaps = 5/188 (2%)
Query: 135 TAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLES-GA 193
T +IT Y G + + +F + K L WNA+I+ Y N ++ L+ F M+ +
Sbjct: 124 TRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDL 183
Query: 194 KPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWE 253
P+ + V+ C+ +S + +G VH LV K+ L D G +L+S Y G + +A +
Sbjct: 184 LPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQ 243
Query: 254 LFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHD----GMKPDWITFVAVLLACN 309
LF +P +++VSWN+MI ++ +G E++ L EM + PD T V VL C
Sbjct: 244 LFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCA 303
Query: 310 HAGLVDLG 317
+ LG
Sbjct: 304 REREIGLG 311
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 80/152 (52%), Gaps = 5/152 (3%)
Query: 213 LQLGKQVHQLVCKSP-LSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMIS 271
+++G+++HQLV S L +D T +I+MYA CG ++ +F + K++ WNA+IS
Sbjct: 100 IEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVIS 159
Query: 272 GYAQHGAGEKALHLFDEM-RHDGMKPDWITFVAVLLACNHAGLVDLGVQY-FNMMVRDFG 329
Y+++ ++ L F EM + PD T+ V+ AC AG+ D+G+ + +V G
Sbjct: 160 SYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKAC--AGMSDVGIGLAVHGLVVKTG 217
Query: 330 IKTKPEHYACMVDLLGRAGRLPEAVDLIKSMP 361
+ +V G G + +A+ L MP
Sbjct: 218 LVEDVFVGNALVSFYGTHGFVTDALQLFDIMP 249
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 383 bits (983), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/487 (40%), Positives = 288/487 (59%), Gaps = 9/487 (1%)
Query: 90 MLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVES 149
+LF + +K+ +++++ Y +CGDL +A F + + + W +++ Y K G ++
Sbjct: 89 LLFGL--DKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDD 146
Query: 150 AERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSML-----ESGAKPNALSLTSVL 204
A +LF EM + +++W+ +I GYV G+ ++ L LF+ M E+ +PN ++++VL
Sbjct: 147 ARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVL 206
Query: 205 LGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQI-PRKDI 263
C L AL+ GK VH + K + D GT+LI MYAKCG L+ A +F + +KD+
Sbjct: 207 SACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDV 266
Query: 264 VSWNAMISGYAQHGAGEKALHLFDEMR-HDGMKPDWITFVAVLLACNHAGLVDLGVQYFN 322
+++AMI A +G ++ LF EM D + P+ +TFV +L AC H GL++ G YF
Sbjct: 267 KAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFK 326
Query: 323 MMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNL 382
MM+ +FGI +HY CMVDL GR+G + EA I SMP +P I+G+LL R+ ++
Sbjct: 327 MMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDI 386
Query: 383 DLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEI 442
E A K L+ELDP ++ YV L+NVYA RW V IR M+ + K PG S++E+
Sbjct: 387 KTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEV 446
Query: 443 SSEVHEFRSSDRLHPELASIHXXXXXXXXXXXXAGYVPDLEFALHDVGEELKEQLLLWHS 502
VHEF D E I+ AGYV D + L D+ E+ KE L +HS
Sbjct: 447 EGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHS 506
Query: 503 EKLAIAYGLLKVPLGLPIRVFKNLRVCGDCHTAIKYISAIEGREIIVRDTTRFHHFKDGF 562
EKLAIA+ L+K G P+R+ KNLR+CGDCH +K IS + REI+VRD RFHHF+DG
Sbjct: 507 EKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGS 566
Query: 563 CSCSDYW 569
CSC D+W
Sbjct: 567 CSCRDFW 573
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 121/265 (45%), Gaps = 48/265 (18%)
Query: 56 SARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGD 115
SA+ FD KD +WN++++ YA+ GL+ +A LF MPE+N +SWS +++GYV CG
Sbjct: 115 SAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGK 174
Query: 116 LDAAVECFY--------AAPVR------------------------------------SV 131
A++ F A VR +
Sbjct: 175 YKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDI 234
Query: 132 ITWTAMITGYMKFGRVESAERLFREM-SLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLE 190
+ TA+I Y K G +E A+R+F + S K + ++AMI G ++ +LF M
Sbjct: 235 VLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTT 294
Query: 191 S-GAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKS-PLSSDTTAGTSLISMYAKCGDL 248
S PN+++ +L C + + GK +++ + ++ ++ +Y + G +
Sbjct: 295 SDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLI 354
Query: 249 KEAWELFVQIPRK-DIVSWNAMISG 272
KEA +P + D++ W +++SG
Sbjct: 355 KEAESFIASMPMEPDVLIWGSLLSG 379
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 118/300 (39%), Gaps = 67/300 (22%)
Query: 154 FREMSLKTLVTWNAMIAGYVEN---GRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNL 210
R + L++ + WN +I V N + + ++ M P+ + +L N
Sbjct: 17 IRHLKLESFL-WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNP 75
Query: 211 SALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMI 270
L LG++ H + L D TSL++MY+ CGDL+ A +F KD+ +WN+++
Sbjct: 76 LHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVV 135
Query: 271 SGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGI 330
+ YA+ G + A LFDEM
Sbjct: 136 NAYAKAGLIDDARKLFDEM----------------------------------------- 154
Query: 331 KTKPEH----YACMVDLLGRAGRLPEAVDLIKSMPF--------KPHPAIFGTLLGACRI 378
PE ++C+++ G+ EA+DL + M +P+ T+L AC
Sbjct: 155 ---PERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGR 211
Query: 379 HKNLDLAE----FAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKA 434
L+ + + K +E+D T L ++YA E R+ ++ K VKA
Sbjct: 212 LGALEQGKWVHAYIDKYHVEIDIVLGTA---LIDMYAKCGSLERAKRVFNALGSKKDVKA 268
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 382 bits (982), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/622 (33%), Positives = 325/622 (52%), Gaps = 64/622 (10%)
Query: 4 KSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLAC---------------H 48
++ V+W S++S A+ +G+F A F ++ V + C
Sbjct: 71 RNVVSWTSLISGLAQ-NGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQ 129
Query: 49 LHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVS 108
+H V R + D + Y + L +A LF +PE+N +W+A +S
Sbjct: 130 IHALAVKCGR-------ILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFIS 182
Query: 109 GYVACGDLDAAVECF--------------YAAPVRSVITW-------------------- 134
V G A+E F + A + + W
Sbjct: 183 NSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDT 242
Query: 135 -----TAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSML 189
+I Y K ++ S+E +F EM K V+W +++A YV+N E L+
Sbjct: 243 DVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSR 302
Query: 190 ESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLK 249
+ + + ++SVL C+ ++ L+LG+ +H K+ + G++L+ MY KCG ++
Sbjct: 303 KDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIE 362
Query: 250 EAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEM--RHDGMKPDWITFVAVLLA 307
++ + F ++P K++V+ N++I GYA G + AL LF+EM R G P+++TFV++L A
Sbjct: 363 DSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSA 422
Query: 308 CNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPA 367
C+ AG V+ G++ F+ M +GI+ EHY+C+VD+LGRAG + A + IK MP +P +
Sbjct: 423 CSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTIS 482
Query: 368 IFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMK 427
++G L ACR+H L AA+NL +LDP + +V L+N +AA RW +R +K
Sbjct: 483 VWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELK 542
Query: 428 ENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIHXXXXXXXXXXXXAGYVPDLEFALH 487
+ K GYSWI + ++VH F++ DR H I AGY PDL+ +L+
Sbjct: 543 GVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLY 602
Query: 488 DVGEELKEQLLLWHSEKLAIAYGLLKVPLGLPIRVFKNLRVCGDCHTAIKYISAIEGREI 547
D+ EE K + HSEKLA+A+GLL +PL +PIR+ KNLR+CGDCH+ K++S REI
Sbjct: 603 DLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREI 662
Query: 548 IVRDTTRFHHFKDGFCSCSDYW 569
IVRD RFH FKDG CSC DYW
Sbjct: 663 IVRDNNRFHRFKDGICSCKDYW 684
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 156/361 (43%), Gaps = 13/361 (3%)
Query: 13 LSAFAKKHGNFEQAR--QLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTA 70
+SA + + G AR + + P P +Y I + L H SAR ++
Sbjct: 17 ISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDH--PESARLVLRLTPARNVV 74
Query: 71 SWNTMISGYAQVGLMGEASMLFAVMPEKNCV--------SWSAMVSGYVACGDLDAAVEC 122
SW ++ISG AQ G A + F M + V ++ A+ S +
Sbjct: 75 SWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALA 134
Query: 123 FYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGL 182
+ V + Y K + A +LF E+ + L TWNA I+ V +GR + +
Sbjct: 135 VKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAI 194
Query: 183 KLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMY 242
+ F PN+++ + L CS+ L LG Q+H LV +S +D + LI Y
Sbjct: 195 EAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFY 254
Query: 243 AKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFV 302
KC ++ + +F ++ K+ VSW ++++ Y Q+ EKA L+ R D ++
Sbjct: 255 GKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMIS 314
Query: 303 AVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPF 362
+VL AC ++LG V+ +T A +VD+ G+ G + ++ MP
Sbjct: 315 SVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSA-LVDMYGKCGCIEDSEQAFDEMPE 373
Query: 363 K 363
K
Sbjct: 374 K 374
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 118/266 (44%), Gaps = 6/266 (2%)
Query: 98 KNCVSWSAMVSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREM 157
KN +S S+M G V + V+ + P + + +I Y K ESA + R
Sbjct: 14 KNAISASSMRLGRVVHARI---VKTLDSPPPPFLANY--LINMYSKLDHPESARLVLRLT 68
Query: 158 SLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGK 217
+ +V+W ++I+G +NG L F M G PN + ++L GK
Sbjct: 69 PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGK 128
Query: 218 QVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHG 277
Q+H L K D G S MY K +A +LF +IP +++ +WNA IS G
Sbjct: 129 QIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDG 188
Query: 278 AGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHY 337
+A+ F E R P+ ITF A L AC+ ++LG+Q +++R G T
Sbjct: 189 RPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRS-GFDTDVSVC 247
Query: 338 ACMVDLLGRAGRLPEAVDLIKSMPFK 363
++D G+ ++ + + M K
Sbjct: 248 NGLIDFYGKCKQIRSSEIIFTEMGTK 273
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 382 bits (980), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/500 (37%), Positives = 292/500 (58%), Gaps = 4/500 (0%)
Query: 74 TMISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSGYVACGDLDAAVECFYAAPVR 129
+++ YA+ G + A +F P++ + + W+ +++GY D+ A F + P R
Sbjct: 166 SLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPER 225
Query: 130 SVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSML 189
+ +W+ +I GY+ G + A++LF M K +V+W +I G+ + G E + + ML
Sbjct: 226 NSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEML 285
Query: 190 ESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLK 249
E G KPN ++ +VL CS AL G ++H + + + D GT+L+ MYAKCG+L
Sbjct: 286 EKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELD 345
Query: 250 EAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACN 309
A +F + KDI+SW AMI G+A HG +A+ F +M + G KPD + F+AVL AC
Sbjct: 346 CAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACL 405
Query: 310 HAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIF 369
++ VDLG+ +F+ M D+ I+ +HY +VDLLGRAG+L EA +L+++MP P +
Sbjct: 406 NSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTW 465
Query: 370 GTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKEN 429
L AC+ HK AE ++NLLELDP Y+ L +A++ + V + R S+++
Sbjct: 466 AALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKR 525
Query: 430 KVVKAPGYSWIEISSEVHEFRSSDRLHPELASIHXXXXXXXXXXXXAGYVPDLEFALHDV 489
++ G+S+IE+ ++++F + D H I GY P ++++HD+
Sbjct: 526 IKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIISLAIQKGYNPGADWSIHDI 585
Query: 490 GEELKEQLLLWHSEKLAIAYGLLKVPLGLPIRVFKNLRVCGDCHTAIKYISAIEGREIIV 549
EE KE + HSEKLA+ G L+ G IR+ KNLR+CGDCH+ +KY+S I R+I++
Sbjct: 586 EEEEKENVTGIHSEKLALTLGFLRTAPGTTIRIIKNLRICGDCHSLMKYVSKISQRDILL 645
Query: 550 RDTTRFHHFKDGFCSCSDYW 569
RD +FHHFKDG CSC DYW
Sbjct: 646 RDARQFHHFKDGRCSCGDYW 665
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 138/293 (47%), Gaps = 13/293 (4%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAF 60
+K +S + WN +++ + + + A LF +PE N+ S++ ++ ++ + A+
Sbjct: 191 IKKESILIWNVLINGYCRAK-DMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQL 249
Query: 61 FDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSGYVACGDL 116
F+ M K+ SW T+I+G++Q G A + M EK N + +A++S G L
Sbjct: 250 FELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGAL 309
Query: 117 DAAVECFYAAPVRSVITW-----TAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAG 171
+ + + + + I TA++ Y K G ++ A +F M+ K +++W AMI G
Sbjct: 310 GSGIR-IHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQG 368
Query: 172 YVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQ-VHQLVCKSPLSS 230
+ +GR ++ F+ M+ SG KP+ + +VL C N S + LG + +
Sbjct: 369 WAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEP 428
Query: 231 DTTAGTSLISMYAKCGDLKEAWELFVQIP-RKDIVSWNAMISGYAQHGAGEKA 282
++ + + G L EA EL +P D+ +W A+ H +A
Sbjct: 429 TLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRA 481
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 108/277 (38%), Gaps = 67/277 (24%)
Query: 153 LFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSA 212
+FR + NA+I G EN R E ++ F ML G KP+ L+ VL S L
Sbjct: 82 IFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGF 141
Query: 213 LQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWE------------------- 253
LG+ +H K+ + D+ SL+ MYAK G LK A++
Sbjct: 142 RWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNV 201
Query: 254 ----------------LFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFD---------- 287
LF +P ++ SW+ +I GY G +A LF+
Sbjct: 202 LINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSW 261
Query: 288 ---------------------EMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVR 326
EM G+KP+ T AVL AC+ +G + G++ ++
Sbjct: 262 TTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYIL- 320
Query: 327 DFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFK 363
D GIK +VD+ + G L A + +M K
Sbjct: 321 DNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHK 357
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 379 bits (972), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/614 (34%), Positives = 324/614 (52%), Gaps = 49/614 (7%)
Query: 4 KSTVTWNSILSAFAKKHGNFEQARQLFEKIPE----PNTVSYNIMLACHL----HHFGVG 55
K V W I+S + + +G FE + +L + PN +++ L + F G
Sbjct: 210 KDIVVWAGIVSCYVE-NGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKG 268
Query: 56 SARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGD 115
V D ++ Y Q+G M +A +F MP+ + V WS M++ + G
Sbjct: 269 VHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGF 328
Query: 116 LDAAVECF------YAAPVR---------------------------------SVITWTA 136
+ AV+ F + P + A
Sbjct: 329 CNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNA 388
Query: 137 MITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPN 196
+I Y K ++++A +LF E+S K V+WN +I GY G +F+ L +
Sbjct: 389 LIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVT 448
Query: 197 ALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFV 256
++ +S L C++L+++ LG QVH L K+ + SLI MYAKCGD+K A +F
Sbjct: 449 EVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFN 508
Query: 257 QIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDL 316
++ D+ SWNA+ISGY+ HG G +AL + D M+ KP+ +TF+ VL C++AGL+D
Sbjct: 509 EMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQ 568
Query: 317 GVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGAC 376
G + F M+RD GI+ EHY CMV LLGR+G+L +A+ LI+ +P++P I+ +L A
Sbjct: 569 GQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSAS 628
Query: 377 RIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPG 436
N + A +A+ +L+++P YV ++N+YA +W +VA IR+SMKE V K PG
Sbjct: 629 MNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPG 688
Query: 437 YSWIEISSEVHEFRSSDRLHPELASIHXXXXXXXXXXXXAGYVPDLEFALHDVGEELKEQ 496
SWIE +VH F HP++ I+ AGYVPD L D+ +E K++
Sbjct: 689 LSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDK 748
Query: 497 LLLWHSEKLAIAYGLLKVPLGLP-IRVFKNLRVCGDCHTAIKYISAIEGREIIVRDTTRF 555
L HSE+LA+AYGL+++P I + KNLR+C DCH+A+K IS+I R++++RD RF
Sbjct: 749 RLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRF 808
Query: 556 HHFKDGFCSCSDYW 569
HHF G CSC D+W
Sbjct: 809 HHFHAGVCSCGDHW 822
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 146/319 (45%), Gaps = 17/319 (5%)
Query: 54 VGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSG 109
V SAR F+ + KD W ++S Y + G ++ L + M N ++ +
Sbjct: 197 VDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKA 256
Query: 110 YVACGDLDAAV--------ECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKT 161
+ G D A C+ P V ++ Y + G + A ++F EM
Sbjct: 257 SIGLGAFDFAKGVHGQILKTCYVLDPRVGV----GLLQLYTQLGDMSDAFKVFNEMPKND 312
Query: 162 LVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQ 221
+V W+ MIA + +NG + + LF M E+ PN +L+S+L GC+ LG+Q+H
Sbjct: 313 VVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHG 372
Query: 222 LVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEK 281
LV K D +LI +YAKC + A +LF ++ K+ VSWN +I GY G G K
Sbjct: 373 LVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGK 432
Query: 282 ALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMV 341
A +F E + + +TF + L AC +DLGVQ + ++ K K ++
Sbjct: 433 AFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAK-KVAVSNSLI 491
Query: 342 DLLGRAGRLPEAVDLIKSM 360
D+ + G + A + M
Sbjct: 492 DMYAKCGDIKFAQSVFNEM 510
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 162/371 (43%), Gaps = 42/371 (11%)
Query: 33 IPEPNTVSYNIMLACHLHHFGVGSARAF----FDRMEVKDTASWNTMISGYAQVGLMGEA 88
IP ++ +Y ML + SA+A + D + N +++ Y + G +A
Sbjct: 44 IPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDA 103
Query: 89 SMLFAVMPEKNCVSWSAMVSGYVACGD-----------------------------LDAA 119
LF MPE+N VS+ + GY AC D LD A
Sbjct: 104 LNLFDEMPERNNVSFVTLAQGY-ACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKA 162
Query: 120 VEC-FYAAPV------RSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGY 172
C + +P+ + A+I Y G V+SA +F + K +V W +++ Y
Sbjct: 163 EICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCY 222
Query: 173 VENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDT 232
VENG ED LKL M +G PN + + L L A K VH + K+ D
Sbjct: 223 VENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDP 282
Query: 233 TAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHD 292
G L+ +Y + GD+ +A+++F ++P+ D+V W+ MI+ + Q+G +A+ LF MR
Sbjct: 283 RVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREA 342
Query: 293 GMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPE 352
+ P+ T ++L C LG Q ++V+ G ++D+ + ++
Sbjct: 343 FVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVK-VGFDLDIYVSNALIDVYAKCEKMDT 401
Query: 353 AVDLIKSMPFK 363
AV L + K
Sbjct: 402 AVKLFAELSSK 412
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 377 bits (968), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/505 (40%), Positives = 297/505 (58%), Gaps = 14/505 (2%)
Query: 73 NTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPVRSVI 132
T+I Y G + A +F M + N V+W+A+++ D+ A E F VR+
Sbjct: 145 TTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHT 204
Query: 133 TWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESG 192
+W M+ GY+K G +ESA+R+F EM + V+W+ MI G NG + F+ + +G
Sbjct: 205 SWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAG 264
Query: 193 AKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAW 252
PN +SLT VL CS + + GK +H V K+ S + +LI MY++CG++ A
Sbjct: 265 MSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMAR 324
Query: 253 ELFVQIPRKD-IVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHA 311
+F + K IVSW +MI+G A HG GE+A+ LF+EM G+ PD I+F+++L AC+HA
Sbjct: 325 LVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHA 384
Query: 312 GLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGT 371
GL++ G YF+ M R + I+ + EHY CMVDL GR+G+L +A D I MP P ++ T
Sbjct: 385 GLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRT 444
Query: 372 LLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKV 431
LLGAC H N++LAE + L ELDP+++ V L+N YA +W+ VA IR+SM ++
Sbjct: 445 LLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRI 504
Query: 432 VKAPGYSWIEISSEVHEFRSSDR-------LHPELASIHXXXXXXXXXXXXAGYVPDLEF 484
K +S +E+ +++F + ++ H +L I AGY P++
Sbjct: 505 KKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEI------ILRLKDEAGYTPEVAS 558
Query: 485 ALHDVGEELKEQLLLWHSEKLAIAYGLLKVPLGLPIRVFKNLRVCGDCHTAIKYISAIEG 544
AL+DV EE KE + HSEKLA+A+ L ++ G IR+ KNLR+C DCH +K S + G
Sbjct: 559 ALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSKVYG 618
Query: 545 REIIVRDTTRFHHFKDGFCSCSDYW 569
EI+VRD RFH FKDG CSC DYW
Sbjct: 619 VEILVRDRNRFHSFKDGSCSCRDYW 643
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 138/304 (45%), Gaps = 42/304 (13%)
Query: 21 GNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYA 80
G E AR++F+++ +PN V++N ++ V AR FD+M V++ SWN M++GY
Sbjct: 155 GCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYI 214
Query: 81 QVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYA------APVRSVIT- 133
+ G + A +F+ MP ++ VSWS M+ G G + + F +P +T
Sbjct: 215 KAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTG 274
Query: 134 ---------------------------W-----TAMITGYMKFGRVESAERLFREMSLK- 160
W A+I Y + G V A +F M K
Sbjct: 275 VLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKR 334
Query: 161 TLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVH 220
+V+W +MIAG +G+ E+ ++LF M G P+ +S S+L CS+ ++ G+
Sbjct: 335 CIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYF 394
Query: 221 QLVCKS-PLSSDTTAGTSLISMYAKCGDLKEAWELFVQIP-RKDIVSWNAMISGYAQHGA 278
+ + + + ++ +Y + G L++A++ Q+P + W ++ + HG
Sbjct: 395 SEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGN 454
Query: 279 GEKA 282
E A
Sbjct: 455 IELA 458
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 100/262 (38%), Gaps = 64/262 (24%)
Query: 165 WNAMIAGYVENGRAEDGLKLFKSMLESG-AKPNALSLTSVLLGCSNLSALQLGKQVHQLV 223
+N ++ GY E+ + + +F M+ G P++ S V+ N +L+ G Q+H
Sbjct: 73 FNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQA 132
Query: 224 CKSPLSSDTTAGTSLISMYAKCG-------------------------------DLKEAW 252
K L S GT+LI MY CG D+ A
Sbjct: 133 LKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAR 192
Query: 253 ELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHD-------------------- 292
E+F ++ ++ SWN M++GY + G E A +F EM H
Sbjct: 193 EIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNE 252
Query: 293 -----------GMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMV 341
GM P+ ++ VL AC+ +G + G + + V G ++
Sbjct: 253 SFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFG-KILHGFVEKAGYSWIVSVNNALI 311
Query: 342 DLLGRAGRLPEAVDLIKSMPFK 363
D+ R G +P A + + M K
Sbjct: 312 DMYSRCGNVPMARLVFEGMQEK 333
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 374 bits (959), Expect = e-103, Method: Compositional matrix adjust.
Identities = 176/426 (41%), Positives = 269/426 (63%), Gaps = 4/426 (0%)
Query: 42 NIMLACHLHHFGVG--SARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKN 99
N ++ C+ G+G A F++M +DT SWN+M+ G + G + +A LF MP+++
Sbjct: 156 NALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRD 215
Query: 100 CVSWSAMVSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSL 159
+SW+ M+ GY C ++ A E F P R+ ++W+ M+ GY K G +E A +F +M L
Sbjct: 216 LISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPL 275
Query: 160 --KTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGK 217
K +VTW +IAGY E G ++ +L M+ SG K +A ++ S+L C+ L LG
Sbjct: 276 PAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGM 335
Query: 218 QVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHG 277
++H ++ +S L S+ +L+ MYAKCG+LK+A+++F IP+KD+VSWN M+ G HG
Sbjct: 336 RIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHG 395
Query: 278 AGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHY 337
G++A+ LF MR +G++PD +TF+AVL +CNHAGL+D G+ YF M + + + + EHY
Sbjct: 396 HGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHY 455
Query: 338 ACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDP 397
C+VDLLGR GRL EA+ ++++MP +P+ I+G LLGACR+H +D+A+ NL++LDP
Sbjct: 456 GCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDP 515
Query: 398 SSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHP 457
Y L+N+YAA WE VA IR MK V K G S +E+ +HEF D+ HP
Sbjct: 516 CDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHP 575
Query: 458 ELASIH 463
+ I+
Sbjct: 576 KSDQIY 581
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 72/142 (50%), Gaps = 2/142 (1%)
Query: 150 AERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSN 209
A R+F ++ + N++I + +N + +F M G + + +L CS
Sbjct: 70 AVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSG 129
Query: 210 LSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDL--KEAWELFVQIPRKDIVSWN 267
S L + K +H + K LSSD +LI Y++CG L ++A +LF ++ +D VSWN
Sbjct: 130 QSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWN 189
Query: 268 AMISGYAQHGAGEKALHLFDEM 289
+M+ G + G A LFDEM
Sbjct: 190 SMLGGLVKAGELRDARRLFDEM 211
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%), Gaps = 4/144 (2%)
Query: 207 CSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSW 266
C+NL+ + KQ+H + + L D LIS + C A +F Q+ ++
Sbjct: 29 CANLNQV---KQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLC 85
Query: 267 NAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVR 326
N++I +AQ+ +A +F EM+ G+ D T+ +L AC+ + + V+ + +
Sbjct: 86 NSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPV-VKMMHNHIE 144
Query: 327 DFGIKTKPEHYACMVDLLGRAGRL 350
G+ + ++D R G L
Sbjct: 145 KLGLSSDIYVPNALIDCYSRCGGL 168
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust.
Identities = 215/618 (34%), Positives = 336/618 (54%), Gaps = 53/618 (8%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFE------KIPEPNTVS-------------- 40
M + VTWNS++ A+ KH ++A +++ +P+ T+S
Sbjct: 125 MSERHIVTWNSLI-AYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKE 183
Query: 41 ------YNIMLACHLHHFGVGSA--------------RAFFDRMEVKDTASWNTMISGYA 80
++L + + VGSA + DR+E KD +I GY+
Sbjct: 184 AQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYS 243
Query: 81 QVGLMGEASMLF-AVMPEKNCVSWSAMVSGYVACGDLD--AAVECFYAAPVRS-----VI 132
Q G EA F +++ EK + S ++CG+L + + V+S +
Sbjct: 244 QKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALA 303
Query: 133 TWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESG 192
+ T+++T Y++ V+ + R+F+ + V+W ++I+G V+NGR E L F+ M+
Sbjct: 304 SQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDS 363
Query: 193 AKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAW 252
KPN+ +L+S L GCSNL+ + G+Q+H +V K D AG+ LI +Y KCG A
Sbjct: 364 IKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMAR 423
Query: 253 ELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAG 312
+F + D++S N MI YAQ+G G +AL LF+ M + G++P+ +T ++VLLACN++
Sbjct: 424 LVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSR 483
Query: 313 LVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTL 372
LV+ G + F+ +D I +HYACMVDLLGRAGRL EA +++ + P ++ TL
Sbjct: 484 LVEEGCELFDSFRKD-KIMLTNDHYACMVDLLGRAGRLEEA-EMLTTEVINPDLVLWRTL 541
Query: 373 LGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVV 432
L AC++H+ +++AE + +LE++P + ++N+YA+ +W V ++ MK+ K+
Sbjct: 542 LSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLK 601
Query: 433 KAPGYSWIEISSEVHEFRSSDRL-HPELASIHXXXXXXXXXXXXAGYVPDLEFALHDVGE 491
K P SW+EI+ E H F + D HP I GYV D D+ E
Sbjct: 602 KNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCVFQDMEE 661
Query: 492 ELKEQLLLWHSEKLAIAYGLLKVPLGLPIRVFKNLRVCGDCHTAIKYISAIEGREIIVRD 551
KE+ L HSEKLAIA+ + + +G IR+ KNLRVC DCH+ IK +S + REII RD
Sbjct: 662 TAKERSLHQHSEKLAIAFAVWR-NVGGSIRILKNLRVCVDCHSWIKIVSRVMKREIICRD 720
Query: 552 TTRFHHFKDGFCSCSDYW 569
+ RFHHF+DG CSC DYW
Sbjct: 721 SKRFHHFRDGSCSCGDYW 738
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 155/322 (48%), Gaps = 10/322 (3%)
Query: 36 PNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVM 95
P +S + ++ L + AR FD M + +WN++I+ + EA ++ +M
Sbjct: 97 PAEISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLM 156
Query: 96 PEKNCVSWSAMVSG-YVACGDLDAAVEC--------FYAAPVRSVITWTAMITGYMKFGR 146
N + +S + A DL E V +V +A++ Y+KFG+
Sbjct: 157 ITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGK 216
Query: 147 VESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLG 206
A+ + + K +V A+I GY + G + +K F+SML +PN + SVL+
Sbjct: 217 TREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLIS 276
Query: 207 CSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSW 266
C NL + GK +H L+ KS S + TSL++MY +C + ++ +F I + VSW
Sbjct: 277 CGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSW 336
Query: 267 NAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVR 326
++ISG Q+G E AL F +M D +KP+ T + L C++ + + G Q ++ +
Sbjct: 337 TSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTK 396
Query: 327 DFGIKTKPEHYACMVDLLGRAG 348
+G + ++DL G+ G
Sbjct: 397 -YGFDRDKYAGSGLIDLYGKCG 417
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 372 bits (955), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/439 (41%), Positives = 272/439 (61%), Gaps = 9/439 (2%)
Query: 135 TAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAK 194
T ++ Y K G + SA +LF EM ++ + +WNA+IAG V RA + ++L+K M G +
Sbjct: 148 TTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIR 207
Query: 195 PNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWEL 254
+ +++ + L CS+L ++ G+ + + + + I MY+KCG + +A+++
Sbjct: 208 RSEVTVVAALGACSHLGDVKEGENIFH----GYSNDNVIVSNAAIDMYSKCGFVDKAYQV 263
Query: 255 FVQIP-RKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGL 313
F Q +K +V+WN MI+G+A HG +AL +FD++ +G+KPD ++++A L AC HAGL
Sbjct: 264 FEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGL 323
Query: 314 VDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLL 373
V+ G+ FN M G++ +HY C+VDLL RAGRL EA D+I SM P P ++ +LL
Sbjct: 324 VEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLL 382
Query: 374 GACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVK 433
GA I+ ++++AE A++ + E+ ++ +V L+NVYAAQ RW+ V R+R M+ +V K
Sbjct: 383 GASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKK 442
Query: 434 APGYSWIEISSEVHEFRSSDRLHPELASIHXXXXXXXXXXXXAGYVPDLEFALHDVGEEL 493
PG S+IE +HEF +SD+ H + I+ GYV LHD+GEE
Sbjct: 443 IPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIREDGYVAQTGLVLHDIGEEE 502
Query: 494 KEQLLLWHSEKLAIAYGLLKVPLG---LPIRVFKNLRVCGDCHTAIKYISAIEGREIIVR 550
KE L +HSEKLA+AYGL+ + P+RV NLR+CGDCH K+IS I REIIVR
Sbjct: 503 KENALCYHSEKLAVAYGLMMMDGADEESPVRVINNLRICGDCHVVFKHISKIYKREIIVR 562
Query: 551 DTTRFHHFKDGFCSCSDYW 569
D RFH FKDG CSC D+W
Sbjct: 563 DRVRFHRFKDGSCSCRDFW 581
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 115/242 (47%), Gaps = 11/242 (4%)
Query: 144 FGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESG------AKPNA 197
FG + A ++FR + WNA+I G+ + ++SML+ + +A
Sbjct: 50 FGDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDA 109
Query: 198 LSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQ 257
L+ + L C+ Q+H + + LS+D+ T+L+ Y+K GDL A++LF +
Sbjct: 110 LTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDE 169
Query: 258 IPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLG 317
+P +D+ SWNA+I+G +A+ L+ M +G++ +T VA L AC+H G V G
Sbjct: 170 MPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEG 229
Query: 318 VQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACR 377
F+ D I + +D+ + G + +A + + K + T++
Sbjct: 230 ENIFHGYSNDNVIVSNA-----AIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFA 284
Query: 378 IH 379
+H
Sbjct: 285 VH 286
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 119/251 (47%), Gaps = 12/251 (4%)
Query: 56 SARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNC-VSWSAMVSGYVAC- 113
SA FD M V+D ASWN +I+G EA L+ M + S +V+ AC
Sbjct: 162 SAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACS 221
Query: 114 --GDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMS-LKTLVTWNAMIA 170
GD+ F+ +VI A I Y K G V+ A ++F + + K++VTWN MI
Sbjct: 222 HLGDVKEGENIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMIT 281
Query: 171 GYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQV-HQLVCKSPLS 229
G+ +G A L++F + ++G KP+ +S + L C + ++ G V + + CK
Sbjct: 282 GFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVER 341
Query: 230 SDTTAGTSLISMYAKCGDLKEAWELFVQ---IPRKDIVSWNAMISGYAQHGAGEKALHLF 286
+ G ++ + ++ G L+EA ++ IP D V W +++ + E A
Sbjct: 342 NMKHYGC-VVDLLSRAGRLREAHDIICSMSMIP--DPVLWQSLLGASEIYSDVEMAEIAS 398
Query: 287 DEMRHDGMKPD 297
E++ G+ D
Sbjct: 399 REIKEMGVNND 409
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 372 bits (954), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/434 (41%), Positives = 261/434 (60%), Gaps = 4/434 (0%)
Query: 137 MITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLE-SGAKP 195
+I MK G A+++ R S + ++TWN MI GYV N + E+ LK K+ML + KP
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP 163
Query: 196 NALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELF 255
N S S L C+ L L K VH L+ S + + ++L+ +YAKCGD+ + E+F
Sbjct: 164 NKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVF 223
Query: 256 VQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVD 315
+ R D+ WNAMI+G+A HG +A+ +F EM + + PD ITF+ +L C+H GL++
Sbjct: 224 YSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLE 283
Query: 316 LGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGA 375
G +YF +M R F I+ K EHY MVDLLGRAGR+ EA +LI+SMP +P I+ +LL +
Sbjct: 284 EGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSS 343
Query: 376 CRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAP 435
R +KN +L E A +N L + + YV L+N+Y++ +WE ++R M + + KA
Sbjct: 344 SRTYKNPELGEIAIQN---LSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAK 400
Query: 436 GYSWIEISSEVHEFRSSDRLHPELASIHXXXXXXXXXXXXAGYVPDLEFALHDVGEELKE 495
G SW+E +H F++ D H E +I+ G+V D + L DV EE KE
Sbjct: 401 GKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEEKE 460
Query: 496 QLLLWHSEKLAIAYGLLKVPLGLPIRVFKNLRVCGDCHTAIKYISAIEGREIIVRDTTRF 555
+ L +HSEKLA+AY +LK G IR+ KN+R+C DCH IK +S + R II+RD RF
Sbjct: 461 ENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIRF 520
Query: 556 HHFKDGFCSCSDYW 569
H F+DG CSC DYW
Sbjct: 521 HRFEDGLCSCRDYW 534
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 119/270 (44%), Gaps = 28/270 (10%)
Query: 36 PNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEA-----SM 90
P + N+++ + G A+ ++ +WN MI GY + EA +M
Sbjct: 96 PGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNM 155
Query: 91 LFAVMPEKNCVSWSAMVSGYVACGDL-----------DAAVECFYAAPVRSVITWTAMIT 139
L + N S+++ ++ GDL D+ +E + I +A++
Sbjct: 156 LSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIEL-------NAILSSALVD 208
Query: 140 GYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALS 199
Y K G + ++ +F + + WNAMI G+ +G A + +++F M P++++
Sbjct: 209 VYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSIT 268
Query: 200 LTSVLLGCSNLSALQLGKQVHQLVCKS-PLSSDTTAGTSLISMYAKCGDLKEAWELFVQI 258
+L CS+ L+ GK+ L+ + + +++ + + G +KEA+EL +
Sbjct: 269 FLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESM 328
Query: 259 P-RKDIVSWNAMISG---YAQHGAGEKALH 284
P D+V W +++S Y GE A+
Sbjct: 329 PIEPDVVIWRSLLSSSRTYKNPELGEIAIQ 358
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 371 bits (953), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/541 (39%), Positives = 302/541 (55%), Gaps = 26/541 (4%)
Query: 54 VGSARAFFDRMEVKDTASWNTMISGYAQ-VGLMGEASMLFAVM-------PEKNCVSWSA 105
V A FD +E + WNT+I A V EA ML+ M P+K+ +
Sbjct: 99 VNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVL 158
Query: 106 MVSGYVACGDLDAAVECFYAAPV--RSVITWTAMITGYMKFGRVESAERLFREMSLKTLV 163
Y+ V C V +I Y G ++ A ++F EM ++LV
Sbjct: 159 KACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLV 218
Query: 164 TWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLV 223
+WN+MI V G + L+LF+ M S +P+ ++ SVL C+ L +L LG H +
Sbjct: 219 SWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFL 277
Query: 224 ---CKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGE 280
C ++ D SLI MY KCG L+ A ++F + ++D+ SWNAMI G+A HG E
Sbjct: 278 LRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAE 337
Query: 281 KALHLFDEM--RHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYA 338
+A++ FD M + + ++P+ +TFV +L+ACNH G V+ G QYF+MMVRD+ I+ EHY
Sbjct: 338 EAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYG 397
Query: 339 CMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGAC-RIHKNLDLAEFAAKNLL--EL 395
C+VDL+ RAG + EA+D++ SMP KP I+ +LL AC + +++L+E A+N++ +
Sbjct: 398 CIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKE 457
Query: 396 DPSSATG-----YVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFR 450
D S+ G YV L+ VYA+ +RW V +R+ M E+ + K PG S IEI+ HEF
Sbjct: 458 DNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFF 517
Query: 451 SSDRLHPELASIHXXXXXXXXXXXXAGYVPDLEFA--LHDVGEELKEQLLLWHSEKLAIA 508
+ D HP+ I+ GY+PD A + + KE L HSE+LAIA
Sbjct: 518 AGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIA 577
Query: 509 YGLLKVPLGLPIRVFKNLRVCGDCHTAIKYISAIEGREIIVRDTTRFHHFKDGFCSCSDY 568
+GL+ +P PIR+FKNLRVC DCH K IS + EIIVRD RFHHFKDG CSC DY
Sbjct: 578 FGLINLPPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDY 637
Query: 569 W 569
W
Sbjct: 638 W 638
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 148/329 (44%), Gaps = 56/329 (17%)
Query: 5 STVTWNSILSAFAKKHGNFEQARQLFEKIPE-----PNTVSYNIMLACHLHHFGVGSARA 59
S+ WN+++ A A E+A L+ K+ E P+ ++ +L + FG +
Sbjct: 113 SSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQ 172
Query: 60 FFDRMEVK-----DTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACG 114
++ VK D N +I Y G + A +F MPE++ VSW++M+ V G
Sbjct: 173 VHCQI-VKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFG 231
Query: 115 DLDAAVECFY---------AAPVRSVI------------TW------------------- 134
+ D+A++ F ++SV+ TW
Sbjct: 232 EYDSALQLFREMQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLV 291
Query: 135 -TAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLE--S 191
++I Y K G + AE++F+ M + L +WNAMI G+ +GRAE+ + F M++
Sbjct: 292 KNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRE 351
Query: 192 GAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKS-PLSSDTTAGTSLISMYAKCGDLKE 250
+PN+++ +L+ C++ + G+Q ++ + + ++ + A+ G + E
Sbjct: 352 NVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITE 411
Query: 251 AWELFVQIPRK-DIVSWNAMISGYAQHGA 278
A ++ + +P K D V W +++ + GA
Sbjct: 412 AIDMVMSMPMKPDAVIWRSLLDACCKKGA 440
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 367 bits (941), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/610 (32%), Positives = 309/610 (50%), Gaps = 49/610 (8%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSY----NIMLACHLHHFGVGS 56
M K ++WNS++++F + + L I +V+Y + + AC F
Sbjct: 305 MPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF-FEK 363
Query: 57 ARAFFDRMEVK----DTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVA 112
R + V + N ++S Y ++G M E+ + MP ++ V+W+A++ GY
Sbjct: 364 GRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAE 423
Query: 113 CGDLDAAVECFYAAPVRSVIT--------------------------------------- 133
D D A+ F V V +
Sbjct: 424 DEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEH 483
Query: 134 -WTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESG 192
++IT Y K G + S++ LF + + ++TWNAM+A +G E+ LKL M G
Sbjct: 484 VKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFG 543
Query: 193 AKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAW 252
+ S + L + L+ L+ G+Q+H L K D+ + MY+KCG++ E
Sbjct: 544 VSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVV 603
Query: 253 ELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAG 312
++ + + SWN +IS +HG E+ F EM G+KP +TFV++L AC+H G
Sbjct: 604 KMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGG 663
Query: 313 LVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTL 372
LVD G+ Y++M+ RDFG++ EH C++DLLGR+GRL EA I MP KP+ ++ +L
Sbjct: 664 LVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSL 723
Query: 373 LGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVV 432
L +C+IH NLD AA+NL +L+P + YV +N++A RWE V +R+ M +
Sbjct: 724 LASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIK 783
Query: 433 KAPGYSWIEISSEVHEFRSSDRLHPELASIHXXXXXXXXXXXXAGYVPDLEFALHDVGEE 492
K SW+++ +V F DR HP+ I+ +GYV D AL D EE
Sbjct: 784 KKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEE 843
Query: 493 LKEQLLLWHSEKLAIAYGLLKVPLGLPIRVFKNLRVCGDCHTAIKYISAIEGREIIVRDT 552
KE L HSE+LA+AY L+ P G +R+FKNLR+C DCH+ K++S + GR I++RD
Sbjct: 844 QKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQ 903
Query: 553 TRFHHFKDGF 562
RFHHF+ G
Sbjct: 904 YRFHHFERGL 913
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 167/316 (52%), Gaps = 10/316 (3%)
Query: 54 VGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVM----PEKNCVSWSAMVS- 108
V A FD+M +DT SWN++ + YAQ G + E+ +F++M E N + S ++S
Sbjct: 194 VDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSV 253
Query: 109 -GYVACGDLDAAVECFYAA-PVRSVI-TWTAMITGYMKFGRVESAERLFREMSLKTLVTW 165
G+V + SV+ ++ Y GR A +F++M K L++W
Sbjct: 254 LGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISW 313
Query: 166 NAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCK 225
N+++A +V +GR+ D L L SM+ SG N ++ TS L C + G+ +H LV
Sbjct: 314 NSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVV 373
Query: 226 SPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHL 285
S L + G +L+SMY K G++ E+ + +Q+PR+D+V+WNA+I GYA+ +KAL
Sbjct: 374 SGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAA 433
Query: 286 FDEMRHDGMKPDWITFVAVLLACNHAG-LVDLGVQYFNMMVRDFGIKTKPEHYACMVDLL 344
F MR +G+ ++IT V+VL AC G L++ G + + + G ++ ++ +
Sbjct: 434 FQTMRVEGVSSNYITVVSVLSACLLPGDLLERG-KPLHAYIVSAGFESDEHVKNSLITMY 492
Query: 345 GRAGRLPEAVDLIKSM 360
+ G L + DL +
Sbjct: 493 AKCGDLSSSQDLFNGL 508
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/420 (27%), Positives = 203/420 (48%), Gaps = 67/420 (15%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKI----PEPNTVSYNIMLAC--HLHHFGV 54
M + T++WNSI +A+A ++G+ E++ ++F + E N+ + + +L+ H+ H
Sbjct: 204 MSERDTISWNSIAAAYA-QNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKW 262
Query: 55 GSA------RAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVS 108
G + FD + NT++ YA G EA+++F MP K+ +SW+++++
Sbjct: 263 GRGIHGLVVKMGFDSV----VCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMA 318
Query: 109 GYVACG-DLDA-AVECFYAAPVRSV--ITWT----------------------------- 135
+V G LDA + C + +SV +T+T
Sbjct: 319 SFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFY 378
Query: 136 ------AMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSML 189
A+++ Y K G + + R+ +M + +V WNA+I GY E+ + L F++M
Sbjct: 379 NQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMR 438
Query: 190 ESGAKPNALSLTSVLLGC---SNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCG 246
G N +++ SVL C +L L+ GK +H + + SD SLI+MYAKCG
Sbjct: 439 VEGVSSNYITVVSVLSACLLPGDL--LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCG 496
Query: 247 DLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLL 306
DL + +LF + ++I++WNAM++ A HG GE+ L L +MR G+ D +F L
Sbjct: 497 DLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLS 556
Query: 307 ACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLI-----KSMP 361
A +++ G Q + V+ G + + D+ + G + E V ++ +S+P
Sbjct: 557 AAAKLAVLEEGQQLHGLAVK-LGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLP 615
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 152/316 (48%), Gaps = 24/316 (7%)
Query: 64 MEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYV-ACGDLDA---- 118
M V++ SWNTM+SG +VGL E F M + S +++ V ACG +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 119 --AVECFYAAP--VRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVE 174
V F A + V TA++ Y +G V + ++F EM + +V+W +++ GY +
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 175 NGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTA 234
G E+ + ++K M G N S++ V+ C L LG+Q+ V KS L S
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180
Query: 235 GTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMR--HD 292
SLISM G++ A +F Q+ +D +SWN++ + YAQ+G E++ +F MR HD
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 240
Query: 293 GMKPDWI-TFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGR----A 347
+ + T ++VL +H Q + + +K + C+ + L R A
Sbjct: 241 EVNSTTVSTLLSVLGHVDH--------QKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGA 292
Query: 348 GRLPEAVDLIKSMPFK 363
GR EA + K MP K
Sbjct: 293 GRSVEANLVFKQMPTK 308
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 100/461 (21%), Positives = 206/461 (44%), Gaps = 55/461 (11%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAF 60
M V++ V+WN+++S + G + + + F K+ + + ++A + G S F
Sbjct: 1 MPVRNEVSWNTMMSGIVRV-GLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGR-SGSMF 58
Query: 61 FDRMEVKDTASWNTMISG----------YAQVGLMGEASMLFAVMPEKNCVSWSAMVSGY 110
+ ++V + + ++S Y GL+ + +F MP++N VSW++++ GY
Sbjct: 59 REGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGY 118
Query: 111 VACGDLDAAVECFYA--------------------------APVRSVI------------ 132
G+ + ++ + + R +I
Sbjct: 119 SDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKL 178
Query: 133 -TWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLES 191
++I+ G V+ A +F +MS + ++WN++ A Y +NG E+ ++F M
Sbjct: 179 AVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRF 238
Query: 192 GAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEA 251
+ N+ +++++L ++ + G+ +H LV K S +L+ MYA G EA
Sbjct: 239 HDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEA 298
Query: 252 WELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHA 311
+F Q+P KD++SWN++++ + G AL L M G +++TF + L AC
Sbjct: 299 NLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTP 358
Query: 312 GLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGT 371
+ G + + +V G+ +V + G+ G + E+ ++ MP + A +
Sbjct: 359 DFFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVA-WNA 416
Query: 372 LLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAA 412
L+G ++ D A AA + ++ S+ Y+ + +V +A
Sbjct: 417 LIGGYAEDEDPDKA-LAAFQTMRVEGVSSN-YITVVSVLSA 455
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 366 bits (939), Expect = e-101, Method: Compositional matrix adjust.
Identities = 171/465 (36%), Positives = 280/465 (60%), Gaps = 4/465 (0%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAF 60
M ++ V+WN+++ +A+ G ++A +LF+++PE N VS+N M+ + + A
Sbjct: 135 MPERNVVSWNTMIDGYAQS-GRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNL 193
Query: 61 FDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAV 120
F+RM +D SW M+ G A+ G + EA LF MPE+N +SW+AM++GY +D A
Sbjct: 194 FERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEAD 253
Query: 121 ECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAED 180
+ F P R +W MITG+++ + A LF M K +++W MI GYVEN E+
Sbjct: 254 QLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEE 313
Query: 181 GLKLFKSMLESGA-KPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLI 239
L +F ML G+ KPN + S+L CS+L+ L G+Q+HQL+ KS + ++L+
Sbjct: 314 ALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALL 373
Query: 240 SMYAKCGDLKEAWELFVQ--IPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPD 297
+MY+K G+L A ++F + ++D++SWN+MI+ YA HG G++A+ ++++MR G KP
Sbjct: 374 NMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPS 433
Query: 298 WITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLI 357
+T++ +L AC+HAGLV+ G+++F +VRD + + EHY C+VDL GRAGRL + + I
Sbjct: 434 AVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFI 493
Query: 358 KSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWE 417
+ + +G +L AC +H + +A+ K +LE A YV ++N+YAA + E
Sbjct: 494 NCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKRE 553
Query: 418 HVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASI 462
A +R MKE + K PG SW+++ + H F D+ HP+ ++
Sbjct: 554 EAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEAL 598
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 159/296 (53%), Gaps = 42/296 (14%)
Query: 54 VGSARAFFDRMEVKDTASWNTMISGYAQVGLMGE-------------------------- 87
+ AR FD + +D +W +I+GY ++G M E
Sbjct: 62 IAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLR 121
Query: 88 ------ASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPVRSVITWTAMITGY 141
A MLF MPE+N VSW+ M+ GY G +D A+E F P R++++W +M+
Sbjct: 122 SKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKAL 181
Query: 142 MKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLT 201
++ GR++ A LF M + +V+W AM+ G +NG+ ++ +LF M E N +S
Sbjct: 182 VQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPER----NIISWN 237
Query: 202 SVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK 261
+++ G + + + Q+ Q++ + +S T +I+ + + ++ +A LF ++P K
Sbjct: 238 AMITGYAQNNRIDEADQLFQVMPERDFASWNT----MITGFIRNREMNKACGLFDRMPEK 293
Query: 262 DIVSWNAMISGYAQHGAGEKALHLFDEMRHDG-MKPDWITFVAVLLACNH-AGLVD 315
+++SW MI+GY ++ E+AL++F +M DG +KP+ T+V++L AC+ AGLV+
Sbjct: 294 NVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVE 349
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 128/218 (58%), Gaps = 13/218 (5%)
Query: 75 MISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPVR-SVIT 133
+I +VG + EA LF +PE++ V+W+ +++GY+ GD+ A E F R +V+T
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVT 111
Query: 134 WTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGA 193
WTAM++GY++ ++ AE LF+EM + +V+WN MI GY ++GR + L+LF M E
Sbjct: 112 WTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPER-- 169
Query: 194 KPNALSLTSVLLGCSNLSALQLGK--QVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEA 251
N +S S++ +Q G+ + L + P D + T+++ AK G + EA
Sbjct: 170 --NIVSWNSMVKAL-----VQRGRIDEAMNLFERMP-RRDVVSWTAMVDGLAKNGKVDEA 221
Query: 252 WELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEM 289
LF +P ++I+SWNAMI+GYAQ+ ++A LF M
Sbjct: 222 RRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVM 259
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 19/156 (12%)
Query: 238 LISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPD 297
LI K G + EA +LF +P +D+V+W +I+GY + G +A LFD +
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVT 111
Query: 298 WITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEH----YACMVDLLGRAGRLPEA 353
W V+ L + ++ Q PE + M+D ++GR+ +A
Sbjct: 112 WTAMVSGYLRSKQLSIAEMLFQEM------------PERNVVSWNTMIDGYAQSGRIDKA 159
Query: 354 VDLIKSMPFK---PHPAIFGTLLGACRIHKNLDLAE 386
++L MP + ++ L+ RI + ++L E
Sbjct: 160 LELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFE 195
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/539 (36%), Positives = 302/539 (56%), Gaps = 15/539 (2%)
Query: 43 IMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVS 102
I LAC + F + + D +N++I +++ L + M N
Sbjct: 48 ITLACSAR--AIAYTHLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSP 105
Query: 103 WSAMVSGYV-ACGDLDA-----AVECFYAAPVRSVITWT--AMITGYMKFGRVESAERLF 154
+ + + +C DL A V C + T+ A++T Y K G +E A ++F
Sbjct: 106 SNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVF 165
Query: 155 REMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQ 214
M K++V WN++++G+ +NG A++ +++F M ESG +P++ + S+L C+ A+
Sbjct: 166 DRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVS 225
Query: 215 LGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYA 274
LG VHQ + L + GT+LI++Y++CGD+ +A E+F ++ ++ +W AMIS Y
Sbjct: 226 LGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYG 285
Query: 275 QHGAGEKALHLFDEMRHD-GMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTK 333
HG G++A+ LF++M D G P+ +TFVAVL AC HAGLV+ G + M + + +
Sbjct: 286 THGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPG 345
Query: 334 PEHYACMVDLLGRAGRLPEAVDLIKSMPFK---PHPAIFGTLLGACRIHKNLDLAEFAAK 390
EH+ CMVD+LGRAG L EA I + PA++ +LGAC++H+N DL AK
Sbjct: 346 VEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAK 405
Query: 391 NLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFR 450
L+ L+P + +V L+N+YA + + V+ IR M N + K GYS IE+ ++ + F
Sbjct: 406 RLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFS 465
Query: 451 SSDRLHPELASIHXXXXXXXXXXXXAGYVPDLEFALHDVGEELKEQLLLWHSEKLAIAYG 510
D H E I+ GY P E +H V EE KE L +HSEKLA+A+G
Sbjct: 466 MGDESHQETGEIYRYLETLISRCKEIGYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFG 525
Query: 511 LLKVPLGLPIRVFKNLRVCGDCHTAIKYISAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
LLK + + I + KNLR+C DCH+A KYIS + R+I VRD RFHHF++G CSC DYW
Sbjct: 526 LLKT-VDVAITIVKNLRICEDCHSAFKYISIVSNRQITVRDKLRFHHFQNGSCSCLDYW 583
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 116/278 (41%), Gaps = 45/278 (16%)
Query: 13 LSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASW 72
L F K G+ E ARQ+F+++PE K +W
Sbjct: 148 LVTFYSKCGDMEGARQVFDRMPE-------------------------------KSIVAW 176
Query: 73 NTMISGYAQVGLMGEASMLFAVMPEKNCVSWSA-MVSGYVACGDLDAA-----VECFYAA 126
N+++SG+ Q GL EA +F M E SA VS AC A V + +
Sbjct: 177 NSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIIS 236
Query: 127 P--VRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKL 184
+V TA+I Y + G V A +F +M + W AMI+ Y +G + ++L
Sbjct: 237 EGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVEL 296
Query: 185 FKSMLES-GAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKS-PLSSDTTAGTSLISMY 242
F M + G PN ++ +VL C++ ++ G+ V++ + KS L ++ M
Sbjct: 297 FNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDML 356
Query: 243 AKCGDLKEAWELFVQIPRKDIVS----WNAMISGYAQH 276
+ G L EA++ Q+ + W AM+ H
Sbjct: 357 GRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMH 394
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 89/173 (51%), Gaps = 18/173 (10%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIP----EPNTVSY-NIMLACHLHHFGVG 55
M KS V WNS++S F +++G ++A Q+F ++ EP++ ++ +++ AC G
Sbjct: 168 MPEKSIVAWNSLVSGF-EQNGLADEAIQVFYQMRESGFEPDSATFVSLLSAC--AQTGAV 224
Query: 56 SARAFFDRMEVKDTASWNT-----MISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGY 110
S ++ + + + N +I+ Y++ G +G+A +F M E N +W+AM+S Y
Sbjct: 225 SLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAY 284
Query: 111 VACGDLDAAVECFY-----AAPVRSVITWTAMITGYMKFGRVESAERLFREMS 158
G AVE F P+ + +T+ A+++ G VE +++ M+
Sbjct: 285 GTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMT 337
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 364 bits (935), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/530 (35%), Positives = 303/530 (57%), Gaps = 23/530 (4%)
Query: 57 ARAFFDRMEVK-DTASWNTMISGYAQVG-----LMGEASMLFAVMPEKNCVSWSAMVSGY 110
A+ FD + T+ WN +I G++ ++ ML + + + +++ +
Sbjct: 58 AQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALK-- 115
Query: 111 VACGDLDAAVECF--YAAPVRS-----VITWTAMITGYMKFGRVESAERLFREMSLKTLV 163
+C + + +C + + +RS I T+++ Y G VE A ++F EM ++ LV
Sbjct: 116 -SCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLV 174
Query: 164 TWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLV 223
+WN MI + G L ++K M G ++ +L ++L C+++SAL +G +H++
Sbjct: 175 SWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIA 234
Query: 224 CKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKAL 283
C S +LI MYAKCG L+ A +F + ++D+++WN+MI GY HG G +A+
Sbjct: 235 CDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAI 294
Query: 284 HLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDL 343
F +M G++P+ ITF+ +LL C+H GLV GV++F +M F + +HY CMVDL
Sbjct: 295 SFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDL 354
Query: 344 LGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGY 403
GRAG+L ++++I + P ++ TLLG+C+IH+NL+L E A K L++L+ +A Y
Sbjct: 355 YGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDY 414
Query: 404 VQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIH 463
V + ++Y+A N + A +R+ ++ + + PG+SWIEI +VH+F D++HPE A I+
Sbjct: 415 VLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIY 474
Query: 464 XXXXXXXXXXXXAGYVPDLEFALHDVGEELKEQLL----LWHSEKLAIAYGLLKVPLGLP 519
AGY P+ + L ++ L HSEKLAIAYGL++ G
Sbjct: 475 SELGEVINRAILAGYKPEDS---NRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTT 531
Query: 520 IRVFKNLRVCGDCHTAIKYISAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
+R+ KNLRVC DCH+ KY+S REIIVRD RFHHF DG CSC+DYW
Sbjct: 532 LRITKNLRVCRDCHSFTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 118/243 (48%), Gaps = 10/243 (4%)
Query: 44 MLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVM-PEKNCVS 102
++ C+ + V A FD M V+D SWN MI ++ VGL +A ++ M E C
Sbjct: 148 LVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGD 207
Query: 103 WSAMVSGYVACGDLDA----AVECFYAAPVR---SVITWTAMITGYMKFGRVESAERLFR 155
+V+ +C + A + A +R V A+I Y K G +E+A +F
Sbjct: 208 SYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFN 267
Query: 156 EMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQL 215
M + ++TWN+MI GY +G + + F+ M+ SG +PNA++ +LLGCS+ ++
Sbjct: 268 GMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKE 327
Query: 216 GKQVHQLVCKS-PLSSDTTAGTSLISMYAKCGDLKEAWEL-FVQIPRKDIVSWNAMISGY 273
G + +++ L+ + ++ +Y + G L+ + E+ + +D V W ++
Sbjct: 328 GVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSC 387
Query: 274 AQH 276
H
Sbjct: 388 KIH 390
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 363 bits (932), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/519 (37%), Positives = 292/519 (56%), Gaps = 11/519 (2%)
Query: 57 ARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNC----VSWSAMVSGYVA 112
A F RME KD SW TMISGY L +A + +M + + ++ +A++S
Sbjct: 351 AEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACAT 410
Query: 113 CGDLDAAVE----CFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAM 168
GDLD VE A + VI +I Y K ++ A +F + K +++W ++
Sbjct: 411 LGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSI 470
Query: 169 IAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPL 228
IAG N R + L +F ++ +PNA++LT+ L C+ + AL GK++H V ++ +
Sbjct: 471 IAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGV 529
Query: 229 SSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDE 288
D +L+ MY +CG + AW F +KD+ SWN +++GY++ G G + LFD
Sbjct: 530 GLDDFLPNALLDMYVRCGRMNTAWSQF-NSQKKDVTSWNILLTGYSERGQGSMVVELFDR 588
Query: 289 MRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAG 348
M ++PD ITF+++L C+ + +V G+ YF+ M D+G+ +HYAC+VDLLGRAG
Sbjct: 589 MVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAG 647
Query: 349 RLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLAN 408
L EA I+ MP P PA++G LL ACRIH +DL E +A+++ ELD S Y+ L N
Sbjct: 648 ELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCN 707
Query: 409 VYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIHXXXXX 468
+YA +W VA++RR MKEN + G SW+E+ +VH F S D+ HP+ I+
Sbjct: 708 LYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEG 767
Query: 469 XXXXXXXAGYVPDLEFALHDVGEELKEQLLLWHSEKLAIAYGLLKVPLGLPIRVFKNLRV 528
G E + D E ++++ HSE+ AIA+GL+ G+PI V KNL +
Sbjct: 768 FYEKMSEVGLTKISESSSMDETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSM 827
Query: 529 CGDCHTAIKYISAIEGREIIVRDTTRFHHFKDGFCSCSD 567
C +CH +K+IS REI VRD FHHFKDG CSC D
Sbjct: 828 CENCHDTVKFISKTVRREISVRDAEHFHHFKDGECSCGD 866
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 107/336 (31%), Positives = 169/336 (50%), Gaps = 20/336 (5%)
Query: 42 NIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVM-----P 96
N LA + + A F +M ++ SWN ++ GYA+ G EA L+ M
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 97 EKNCVSWSAMVSGYVACGDLDAAVECFYAAPVR-----SVITWTAMITGYMKFGRVESAE 151
+ + ++ ++ DL E + VR + A+IT Y+K G V+SA
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKE-VHVHVVRYGYELDIDVVNALITMYVKCGDVKSAR 251
Query: 152 RLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLS 211
LF M + +++WNAMI+GY ENG +GL+LF +M P+ ++LTSV+ C L
Sbjct: 252 LLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLG 311
Query: 212 ALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMIS 271
+LG+ +H V + + D + SL MY G +EA +LF ++ RKDIVSW MIS
Sbjct: 312 DRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMIS 371
Query: 272 GYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIK 331
GY + +KA+ + M D +KPD IT AVL AC G +D GV+ + IK
Sbjct: 372 GYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVE-----LHKLAIK 426
Query: 332 TKPEHYAC----MVDLLGRAGRLPEAVDLIKSMPFK 363
+ Y ++++ + + +A+D+ ++P K
Sbjct: 427 ARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRK 462
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 114/239 (47%), Gaps = 15/239 (6%)
Query: 171 GYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSS 230
G NG+ E+ +KL SM E + +++ C A + G +V+ + S S
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 231 DTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMR 290
G + ++M+ + G+L +AW +F ++ +++ SWN ++ GYA+ G ++A+ L+ M
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187
Query: 291 H-DGMKPDWITFVAVLLACNHAGLVDL--GVQYFNMMVRDFGIKTKPEHYACMVDLLGRA 347
G+KPD TF VL C G+ DL G + +VR +G + + ++ + +
Sbjct: 188 WVGGVKPDVYTFPCVLRTC--GGIPDLARGKEVHVHVVR-YGYELDIDVVNALITMYVKC 244
Query: 348 GRLPEAVDLIKSMPFKP----HPAIFGTLL-GACRIHKNLDLAEFAAKNLLELDPSSAT 401
G + A L MP + + I G G C H+ L+L F A L +DP T
Sbjct: 245 GDVKSARLLFDRMPRRDIISWNAMISGYFENGMC--HEGLEL--FFAMRGLSVDPDLMT 299
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 362 bits (928), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/582 (35%), Positives = 321/582 (55%), Gaps = 32/582 (5%)
Query: 13 LSAFAKKHGNFEQARQLFEKIP--EPNTVSYNIMLACHLHHFG--VGSARAFFD----RM 64
L F G A++LF++IP E + V + +L+ +G V S + F + R+
Sbjct: 49 LFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLS-SFSRYGLLVNSMKLFVEMRRKRV 107
Query: 65 EVKDTA-------SWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLD 117
E+ D + G+AQ G G A + + K C +A++ Y CG +
Sbjct: 108 EIDDVSVVCLFGVCAKLEDLGFAQQG-HGVAVKMGVLTSVKVC---NALMDMYGKCGLVS 163
Query: 118 AAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGR 177
F +SV++WT ++ +K+ +E +F EM + V W M+AGY+ G
Sbjct: 164 EVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGF 223
Query: 178 AEDGLKLFKSML-ESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLS------- 229
+ L+L M+ G N ++L S+L C+ L +G+ VH K +
Sbjct: 224 TREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASY 283
Query: 230 SDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEM 289
D GT+L+ MYAKCG++ + +F + ++++V+WNA+ SG A HG G + +F +M
Sbjct: 284 DDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQM 343
Query: 290 RHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGR 349
+ +KPD +TF AVL AC+H+G+VD G + F+ + R +G++ K +HYACMVDLLGRAG
Sbjct: 344 IRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSL-RFYGLEPKVDHYACMVDLLGRAGL 401
Query: 350 LPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANV 409
+ EA L++ MP P+ + G+LLG+C +H +++AE + L+++ P + + ++N+
Sbjct: 402 IEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNM 461
Query: 410 YAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIHXXXXXX 469
Y A+ R + +R S+++ + K PG S I ++ VH F S DR HP I+
Sbjct: 462 YVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEV 521
Query: 470 XXXXXXAGYVPDLE-FALHDVGE-ELKEQLLLWHSEKLAIAYGLLKVPLGLPIRVFKNLR 527
AGYVPD+ H G+ E KEQ L HSEKLA+ +GLL+ P+ VFKNLR
Sbjct: 522 IERIRSAGYVPDVSGLVSHSEGDLEEKEQALCCHSEKLAVCFGLLETKPSTPLLVFKNLR 581
Query: 528 VCGDCHTAIKYISAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
+C DCH+A+K +S + REII+RD RFH FK G CSCSDYW
Sbjct: 582 ICRDCHSAMKIVSKVYDREIIIRDRNRFHQFKGGSCSCSDYW 623
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 137/306 (44%), Gaps = 18/306 (5%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAF 60
M V ++V + L K G + +++FE++ E + VS+ ++L + G+ R
Sbjct: 140 MGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREV 199
Query: 61 FDRMEVKDTASWNTMISGYAQVGLMGE-----ASMLFAVMPEKNCVSWSAMVSGYVACGD 115
F M ++ +W M++GY G E A M+F N V+ +M+S G+
Sbjct: 200 FHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGN 259
Query: 116 LDAA--VECF---------YAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVT 164
L V + A V+ TA++ Y K G ++S+ +FR M + +VT
Sbjct: 260 LVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVT 319
Query: 165 WNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVC 224
WNA+ +G +G+ + +F M+ KP+ L+ T+VL CS+ + G + +
Sbjct: 320 WNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSLR 378
Query: 225 KSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIP-RKDIVSWNAMISGYAQHGAGEKAL 283
L ++ + + G ++EA L ++P + V +++ + HG E A
Sbjct: 379 FYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAE 438
Query: 284 HLFDEM 289
+ E+
Sbjct: 439 RIKREL 444
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 85/166 (51%), Gaps = 7/166 (4%)
Query: 203 VLLGCSNLSALQLGKQVHQLVCKSPL--SSDTTAGTSLISMYAKCGDLKEAWELFVQIP- 259
+L C++ S L+ GK++H ++ S L + + +L YA G++ A +LF +IP
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 260 -RKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLG- 317
KD V W ++S ++++G ++ LF EMR ++ D ++ V + C A L DLG
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVC--AKLEDLGF 129
Query: 318 VQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFK 363
Q + + G+ T + ++D+ G+ G + E + + + K
Sbjct: 130 AQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEK 175
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 358 bits (920), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 195/535 (36%), Positives = 298/535 (55%), Gaps = 32/535 (5%)
Query: 57 ARAFFDRMEVKDTA-----SWNTMISGYAQVGLMGEASMLFAVM----PEKNCVSWSAMV 107
AR FD +V D++ W M GY++ G +A +++ M E S S +
Sbjct: 186 ARKIFD--DVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVAL 243
Query: 108 SGYVACGDLDAAVECFYAAPVR-----SVITWTAMITGYMKFGRVESAERLFREMSLKTL 162
V DL +A V+ + + ++ YM+ G + A ++F MS + +
Sbjct: 244 KACVDLKDLRVG-RGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNV 302
Query: 163 VTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQL 222
VTWN++I+ + R + LF+ M E + +LT++L CS ++AL GK++H
Sbjct: 303 VTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQ 362
Query: 223 VCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKA 282
+ KS D SL+ MY KCG+++ + +F + KD+ SWN M++ YA +G E+
Sbjct: 363 ILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEV 422
Query: 283 LHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVD 342
++LF+ M G+ PD ITFVA+L C+ GL + G+ F M +F + EHYAC+VD
Sbjct: 423 INLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVD 482
Query: 343 LLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATG 402
+LGRAG++ EAV +I++MPFKP +I+G+LL +CR+H N+ + E AAK L L+P +
Sbjct: 483 ILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGN 542
Query: 403 YVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEV--------HEFRSSDR 454
YV ++N+YA W++V +IR MK+ V K G SW+++ ++ +EFR+SD
Sbjct: 543 YVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDE 602
Query: 455 LHPELASIHXXXXXXXXXXXXAGYVPDLEFALHDVGEELKEQLLLWHSEKLAIAYGLLKV 514
+ +GY P+ LHDV EE K + HSE+LA Y L+
Sbjct: 603 YKKVWTELQ-------EAIEKSGYSPNTSVVLHDVDEETKANWVCGHSERLATTYSLIHT 655
Query: 515 PLGLPIRVFKNLRVCGDCHTAIKYISAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
G+PIR+ KNLRVC DCH+ +K +S + R I++RDT RFHHF DG CSC DYW
Sbjct: 656 GEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 710
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 129/260 (49%), Gaps = 10/260 (3%)
Query: 28 QLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGE 87
Q+ ++ + + V YN++L ++ AR FD M ++ +WN++IS ++ + E
Sbjct: 261 QIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHE 320
Query: 88 ASMLFAVMPEKNC-VSWSAMVSGYVACGDLDAAV--ECFYAAPVRS-----VITWTAMIT 139
LF M E+ SW+ + + AC + A + + +A ++S V +++
Sbjct: 321 MFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMD 380
Query: 140 GYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALS 199
Y K G VE + R+F M K L +WN M+ Y NG E+ + LF+ M+ESG P+ ++
Sbjct: 381 MYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGIT 440
Query: 200 LTSVLLGCSNLSALQLGKQV-HQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQI 258
++L GCS+ + G + ++ + +S L+ + + G +KEA ++ +
Sbjct: 441 FVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETM 500
Query: 259 PRKDIVS-WNAMISGYAQHG 277
P K S W ++++ HG
Sbjct: 501 PFKPSASIWGSLLNSCRLHG 520
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 100/225 (44%), Gaps = 23/225 (10%)
Query: 1 MKVKSTVTWNSILSAFAKK---HGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSA 57
M ++ VTWNS++S +KK H F R++ E++ + + +L + +
Sbjct: 297 MSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTG 356
Query: 58 RAFFDRM----EVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVAC 113
+ ++ E D N+++ Y + G + + +F VM K+ SW+ M++ Y
Sbjct: 357 KEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAIN 416
Query: 114 GDLDAAVECFY------AAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVT--- 164
G+++ + F AP IT+ A+++G G E LF M + V+
Sbjct: 417 GNIEEVINLFEWMIESGVAP--DGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPAL 474
Query: 165 --WNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGC 207
+ ++ G+ ++ +K+ ++M KP+A S+L C
Sbjct: 475 EHYACLVDILGRAGKIKEAVKVIETM---PFKPSASIWGSLLNSC 516
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 358 bits (918), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 197/536 (36%), Positives = 294/536 (54%), Gaps = 24/536 (4%)
Query: 54 VGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKN-------------- 99
+ A F R+ + SWN MI+G+ G +A F +M E N
Sbjct: 158 INEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLL 217
Query: 100 --CVSWSAMVSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREM 157
C S + +G G L V + P + IT +++ Y+K G + SA + F ++
Sbjct: 218 KACSSTGMIYAGKQIHGFL---VRSGFHCPSSATIT-GSLVDLYVKCGYLFSARKAFDQI 273
Query: 158 SLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGK 217
KT+++W+++I GY + G + + LFK + E ++ ++ +L+S++ ++ + L+ GK
Sbjct: 274 KEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGK 333
Query: 218 QVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHG 277
Q+ L K P +T+ S++ MY KCG + EA + F ++ KD++SW +I+GY +HG
Sbjct: 334 QMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHG 393
Query: 278 AGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHY 337
G+K++ +F EM ++PD + ++AVL AC+H+G++ G + F+ ++ GIK + EHY
Sbjct: 394 LGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHY 453
Query: 338 ACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDP 397
AC+VDLLGRAGRL EA LI +MP KP+ I+ TLL CR+H +++L + K LL +D
Sbjct: 454 ACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDA 513
Query: 398 SSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHP 457
+ YV ++N+Y W R + K G SW+EI EVH FRS + HP
Sbjct: 514 KNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHP 573
Query: 458 ELASIHXXXXXXXXXXXXA-GYVPDLEFALHDVGEELKEQLLLWHSEKLAIAYGLLKVPL 516
I GYV L+ LHD+ +E KE+ L HSEKLAI L L
Sbjct: 574 LTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGL 633
Query: 517 ---GLPIRVFKNLRVCGDCHTAIKYISAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
G IRVFKNLRVC DCH IK +S I +VRD RFH F+DG CSC DYW
Sbjct: 634 NQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 127/252 (50%), Gaps = 8/252 (3%)
Query: 115 DLDAAVECFY--AAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGY 172
D V C+ + ++IT +I Y K A ++F M + +V+W+A+++G+
Sbjct: 23 DQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGH 82
Query: 173 VENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDT 232
V NG + L LF M G PN + ++ L C L+AL+ G Q+H K
Sbjct: 83 VLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMV 142
Query: 233 TAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHD 292
G SL+ MY+KCG + EA ++F +I + ++SWNAMI+G+ G G KAL F M+
Sbjct: 143 EVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEA 202
Query: 293 GMK--PDWITFVAVLLACNHAGLVDLGVQYFNMMVRD-FGIKTKPEHYACMVDLLGRAGR 349
+K PD T ++L AC+ G++ G Q +VR F + +VDL + G
Sbjct: 203 NIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGY 262
Query: 350 L---PEAVDLIK 358
L +A D IK
Sbjct: 263 LFSARKAFDQIK 274
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 155/321 (48%), Gaps = 17/321 (5%)
Query: 57 ARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYV-ACGD 115
A FD M ++ SW+ ++SG+ G + + LF+ M + S + ACG
Sbjct: 60 AYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGL 119
Query: 116 LDAAVE-------CFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAM 168
L+A + C V +++ Y K GR+ AE++FR + ++L++WNAM
Sbjct: 120 LNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAM 179
Query: 169 IAGYVENGRAEDGLKLFKSMLESGAK--PNALSLTSVLLGCSNLSALQLGKQVHQLVCKS 226
IAG+V G L F M E+ K P+ +LTS+L CS+ + GKQ+H + +S
Sbjct: 180 IAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRS 239
Query: 227 PL---SSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKAL 283
SS T G SL+ +Y KCG L A + F QI K ++SW+++I GYAQ G +A+
Sbjct: 240 GFHCPSSATITG-SLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAM 298
Query: 284 HLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVR-DFGIKTKPEHYACMVD 342
LF ++ + D +++ L+ G Q + V+ G++T +VD
Sbjct: 299 GLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSV--LNSVVD 356
Query: 343 LLGRAGRLPEAVDLIKSMPFK 363
+ + G + EA M K
Sbjct: 357 MYLKCGLVDEAEKCFAEMQLK 377
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 85/167 (50%), Gaps = 2/167 (1%)
Query: 195 PNA-LSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWE 253
PN +L S+L C+ G QVH + KS + LI MY KC + A++
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62
Query: 254 LFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGL 313
+F +P +++VSW+A++SG+ +G + +L LF EM G+ P+ TF L AC
Sbjct: 63 VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNA 122
Query: 314 VDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSM 360
++ G+Q ++ G + E +VD+ + GR+ EA + + +
Sbjct: 123 LEKGLQIHGFCLK-IGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI 168
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 355 bits (910), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 192/526 (36%), Positives = 289/526 (54%), Gaps = 10/526 (1%)
Query: 53 GVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEA-SMLFAVMPEK---NCVSWSAMVS 108
G G A D + D + +++ +SGY + G E +L E N +++ + +
Sbjct: 186 GNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLR 245
Query: 109 GYVACGDLDAAVECFYAAPVR-----SVITWTAMITGYMKFGRVESAERLFREMSLKTLV 163
+ DL+ A++ ++ VR V A+I Y K G+V A+R+F + + +
Sbjct: 246 LFSNLRDLNLALQV-HSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIF 304
Query: 164 TWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLV 223
++ Y ++ E+ L LF M PN + +L + LS L+ G +H LV
Sbjct: 305 LNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLV 364
Query: 224 CKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKAL 283
KS + G +L++MYAK G +++A + F + +DIV+WN MISG + HG G +AL
Sbjct: 365 LKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREAL 424
Query: 284 HLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDL 343
FD M G P+ ITF+ VL AC+H G V+ G+ YFN +++ F ++ +HY C+V L
Sbjct: 425 EAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGL 484
Query: 344 LGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGY 403
L +AG +A D +++ P + + TLL AC + +N L + A+ +E P+ + Y
Sbjct: 485 LSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVY 544
Query: 404 VQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIH 463
V L+N++A WE VA++R M V K PG SWI I ++ H F + D HPE+ I+
Sbjct: 545 VLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIY 604
Query: 464 XXXXXXXXXXXXAGYVPDLEFALHDVGEELKEQLLLWHSEKLAIAYGLLKVPLGLPIRVF 523
GY PD+ A HDV EE +E L +HSEKLA+AYGL+K P P+ V
Sbjct: 605 AKVKEVMSKIKPLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVT 664
Query: 524 KNLRVCGDCHTAIKYISAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
KN+R+C DCH+AIK IS I R I++RD+ RFHHF DG CSC DYW
Sbjct: 665 KNVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 113/217 (52%), Gaps = 2/217 (0%)
Query: 135 TAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESG-A 193
++I Y+K A +LF M + +V+W AM+ GY +G + LKLFKSM SG +
Sbjct: 73 NSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGES 132
Query: 194 KPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWE 253
+PN T V CSN ++ GKQ H K L S +L+ MY+ C EA
Sbjct: 133 RPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIR 192
Query: 254 LFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGL 313
+ +P D+ +++ +SGY + GA ++ L + + ++ + +T+++ L ++
Sbjct: 193 VLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRD 252
Query: 314 VDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRL 350
++L +Q + MVR FG + E ++++ G+ G++
Sbjct: 253 LNLALQVHSRMVR-FGFNAEVEACGALINMYGKCGKV 288
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 152/354 (42%), Gaps = 44/354 (12%)
Query: 67 KDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAV-----E 121
+D N++I+ Y + A LF +MPE+N VSW AM+ GY G D V
Sbjct: 67 EDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSG-FDFEVLKLFKS 125
Query: 122 CFYAAPVR------SVITWTAMITG-----------YMKFGRVE---------------- 148
F++ R +V+ + +G ++K+G +
Sbjct: 126 MFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCS 185
Query: 149 ---SAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLL 205
A R+ ++ L +++ ++GY+E G ++GL + + N L+ S L
Sbjct: 186 GNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLR 245
Query: 206 GCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVS 265
SNL L L QVH + + +++ A +LI+MY KCG + A +F ++I
Sbjct: 246 LFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFL 305
Query: 266 WNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMV 325
++ Y Q + E+AL+LF +M + P+ TF +L + L+ G +++
Sbjct: 306 NTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVL 365
Query: 326 RDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIH 379
+ G + +V++ ++G + +A M F+ + T++ C H
Sbjct: 366 KS-GYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRD-IVTWNTMISGCSHH 417
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 84/167 (50%), Gaps = 5/167 (2%)
Query: 200 LTSVLLGCSNLSALQLGKQVHQ---LVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFV 256
L +L C+N S L++G+ +H + +S + D SLI++Y KC + A +LF
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93
Query: 257 QIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDG-MKPDWITFVAVLLACNHAGLVD 315
+P +++VSW AM+ GY G + L LF M G +P+ V +C+++G ++
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIE 153
Query: 316 LGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPF 362
G Q+ ++ +G+ + +V + EA+ ++ +P+
Sbjct: 154 EGKQFHGCFLK-YGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPY 199
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 353 bits (906), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 196/528 (37%), Positives = 288/528 (54%), Gaps = 15/528 (2%)
Query: 56 SARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGY----- 110
S R F R+ + NTMI ++ E LF + + + + + S +
Sbjct: 65 SCRVFSQRLN-PTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCC 123
Query: 111 VACGDLDAAVEC----FYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWN 166
+ GDL ++ F + + T ++ Y A ++F E+ + V+WN
Sbjct: 124 IKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWN 183
Query: 167 AMIAGYVENGRAEDGLKLFKSM---LESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLV 223
+ + Y+ N R D L LF M ++ KP+ ++ L C+NL AL GKQVH +
Sbjct: 184 VLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFI 243
Query: 224 CKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKAL 283
++ LS +L+SMY++CG + +A+++F + +++VSW A+ISG A +G G++A+
Sbjct: 244 DENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAI 303
Query: 284 HLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVR-DFGIKTKPEHYACMVD 342
F+EM G+ P+ T +L AC+H+GLV G+ +F+ M +F IK HY C+VD
Sbjct: 304 EAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVD 363
Query: 343 LLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATG 402
LLGRA L +A LIKSM KP I+ TLLGACR+H +++L E +L+EL A
Sbjct: 364 LLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGD 423
Query: 403 YVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASI 462
YV L N Y+ +WE V +R MKE ++ PG S IE+ VHEF D HP I
Sbjct: 424 YVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEI 483
Query: 463 HXXXXXXXXXXXXAGYVPDLEFALHDV-GEELKEQLLLWHSEKLAIAYGLLKVPLGLPIR 521
+ AGYV ++ LH++ EE K L +HSEKLAIA+G+L P G IR
Sbjct: 484 YKMLAEINQQLKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIR 543
Query: 522 VFKNLRVCGDCHTAIKYISAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
V KNLR C DCH K++S + R +IVRD +RFHHFK G CSC+D+W
Sbjct: 544 VTKNLRTCVDCHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 349 bits (896), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 197/525 (37%), Positives = 290/525 (55%), Gaps = 22/525 (4%)
Query: 57 ARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYV--ACG 114
A+ FD+M VK + ++ GY Q G +A LF + + V W + V V AC
Sbjct: 238 AKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEG-VEWDSFVFSVVLKACA 296
Query: 115 DLDAAV------ECFYAAPVRSVIT-WTAMITGYMKFGRVESAERLFREMSLKTLVTWNA 167
L+ C + S ++ T ++ Y+K ESA R F+E+ V+W+A
Sbjct: 297 SLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSA 356
Query: 168 MIAGYVENGRAEDGLKLFKSMLESGAKP-NALSLTSVLLGCSNLSALQLGKQVHQLVCKS 226
+I+GY + + E+ +K FKS+ A N+ + TS+ CS L+ +G QVH K
Sbjct: 357 IISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKR 416
Query: 227 PLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLF 286
L ++LI+MY+KCG L +A E+F + DIV+W A ISG+A +G +AL LF
Sbjct: 417 SLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLF 476
Query: 287 DEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGR 346
++M GMKP+ +TF+AVL AC+HAGLV+ G + M+R + + +HY CM+D+ R
Sbjct: 477 EKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYAR 536
Query: 347 AGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQL 406
+G L EA+ +K+MPF+P + L C HKNL+L E A + L +LDP GYV
Sbjct: 537 SGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLP 596
Query: 407 ANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIHXXX 466
N+Y +WE A + + M E + K SWI+ ++H F D+ HP+ I+
Sbjct: 597 FNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKL 656
Query: 467 XXXXXXXXXAGYVPDLEFALHDVGEELKEQLLLWHSEKLAIAYGLLKV--PLGLPIRVFK 524
G++ F + E +EQLL HSE+LAIA+GL+ V PI+VFK
Sbjct: 657 KEFD------GFMEGDMFQCNMT--ERREQLLD-HSERLAIAFGLISVHGNAPAPIKVFK 707
Query: 525 NLRVCGDCHTAIKYISAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
NLR C DCH K++S + G EI++RD+ RFHHFK+G CSC+DYW
Sbjct: 708 NLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 169/338 (50%), Gaps = 12/338 (3%)
Query: 33 IPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLF 92
I P+ + N +L + + A FD M + S TMIS YA+ G++ +A LF
Sbjct: 113 IENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLF 172
Query: 93 AVM----PEKNCVSWSAMVSGYVACGDLDAAVECFYAAPVRS-VITWTAMITG----YMK 143
+ M + ++ ++ V LD + +A +R+ + + T++ TG Y+K
Sbjct: 173 SGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQ-IHAHVIRAGLCSNTSIETGIVNMYVK 231
Query: 144 FGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSV 203
G + A+R+F +M++K V ++ GY + GRA D LKLF ++ G + ++ + V
Sbjct: 232 CGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVV 291
Query: 204 LLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDI 263
L C++L L LGKQ+H V K L S+ + GT L+ Y KC + A F +I +
Sbjct: 292 LKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPND 351
Query: 264 VSWNAMISGYAQHGAGEKALHLFDEMRHDGMKP-DWITFVAVLLACNHAGLVDLGVQYFN 322
VSW+A+ISGY Q E+A+ F +R + T+ ++ AC+ ++G Q
Sbjct: 352 VSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHA 411
Query: 323 MMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSM 360
++ I ++ A ++ + + G L +A ++ +SM
Sbjct: 412 DAIKRSLIGSQYGESA-LITMYSKCGCLDDANEVFESM 448
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 133/302 (44%), Gaps = 42/302 (13%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAF 60
+ ++S V+ + L F K +FE A + F++I EPN V
Sbjct: 314 LGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDV--------------------- 352
Query: 61 FDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNC-----VSWSAMVSGYVACGD 115
SW+ +ISGY Q+ EA F + KN +++++ D
Sbjct: 353 ----------SWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLAD 402
Query: 116 LDAAVECFYAAPVRSVI----TWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAG 171
+ + A RS+I +A+IT Y K G ++ A +F M +V W A I+G
Sbjct: 403 CNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISG 462
Query: 172 YVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQ-VHQLVCKSPLSS 230
+ G A + L+LF+ M+ G KPN+++ +VL CS+ ++ GK + ++ K ++
Sbjct: 463 HAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAP 522
Query: 231 DTTAGTSLISMYAKCGDLKEAWELFVQIP-RKDIVSWNAMISGYAQHGAGEKALHLFDEM 289
+I +YA+ G L EA + +P D +SW +SG H E +E+
Sbjct: 523 TIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEEL 582
Query: 290 RH 291
R
Sbjct: 583 RQ 584
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 349 bits (895), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 189/525 (36%), Positives = 293/525 (55%), Gaps = 15/525 (2%)
Query: 57 ARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVM----PEKNCVSWSAMVSGYVA 112
A + F ++ T +NTMI GY V EA + M E + ++ ++ A
Sbjct: 85 AASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLK---A 141
Query: 113 CGDLDAAVE-------CFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTW 165
C L + E F V ++I Y + G +E + +F ++ KT +W
Sbjct: 142 CTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASW 201
Query: 166 NAMIAGYVENGRAEDGLKLFKSML-ESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVC 224
++M++ G + L LF+ M E+ K + S LL C+N AL LG +H +
Sbjct: 202 SSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLL 261
Query: 225 KSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALH 284
++ + TSL+ MY KCG L +A +F ++ +++ ++++AMISG A HG GE AL
Sbjct: 262 RNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALR 321
Query: 285 LFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLL 344
+F +M +G++PD + +V+VL AC+H+GLV G + F M+++ ++ EHY C+VDLL
Sbjct: 322 MFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLL 381
Query: 345 GRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYV 404
GRAG L EA++ I+S+P + + I+ T L CR+ +N++L + AA+ LL+L + Y+
Sbjct: 382 GRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYL 441
Query: 405 QLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIHX 464
++N+Y+ W+ VAR R + + + PG+S +E+ + H F S DR HP+ I+
Sbjct: 442 LISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYK 501
Query: 465 XXXXXXXXXXXAGYVPDLEFALHDVGEELKEQLLLWHSEKLAIAYGLLKVPLGLPIRVFK 524
GY PDL L +V EE K++ L HS+K+AIA+GLL P G I++ +
Sbjct: 502 MLHQMEWQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIKIAR 561
Query: 525 NLRVCGDCHTAIKYISAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
NLR+C DCHT K IS I REI+VRD RFH FK G CSC DYW
Sbjct: 562 NLRMCSDCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 339 bits (869), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 192/557 (34%), Positives = 297/557 (53%), Gaps = 25/557 (4%)
Query: 36 PNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVM 95
+T + N ++ ++ + +AR FD M + SW ++ISGY +G A +F M
Sbjct: 62 SDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKM 121
Query: 96 PEKNCV--SWSAMVSGYVACG---------DLDAAVECFYAAPVRSVITWTAMITGYMKF 144
E V + S + AC ++ A +E + R+++ ++++ Y K
Sbjct: 122 HEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLE--ISGLRRNIVVSSSLVDMYGKC 179
Query: 145 GRVESAERLFREM--SLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLE--SGAKPNALSL 200
VE+A R+F M + +V+W +MI Y +N R + ++LF+S + + N L
Sbjct: 180 NDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFML 239
Query: 201 TSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPR 260
SV+ CS+L LQ GK H LV + S+T TSL+ MYAKCG L A ++F++I
Sbjct: 240 ASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRC 299
Query: 261 KDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQY 320
++S+ +MI A+HG GE A+ LFDEM + P+++T + VL AC+H+GLV+ G++Y
Sbjct: 300 HSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEY 359
Query: 321 FNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPA--IFGTLLGACRI 378
++M +G+ HY C+VD+LGR GR+ EA +L K++ ++G LL A R+
Sbjct: 360 LSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRL 419
Query: 379 HKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYS 438
H +++ A+K L++ + + Y+ L+N YA WE +R MK + VK S
Sbjct: 420 HGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACS 479
Query: 439 WIEISSEVHEFRSSDRLHPELASIHXXXXXXXXXXXXAGY------VPDLEFALHDVGEE 492
WIE V+ F + D E I G+ + DV EE
Sbjct: 480 WIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERGHRGSSSMITTSSSVFVDVDEE 539
Query: 493 LKEQLLLWHSEKLAIAYGLLKVPLGLPIRVFKNLRVCGDCHTAIKYISAIEGREIIVRDT 552
K++++ H E+LA+AYGLL +P G IR+ NLR+C DCH A K IS I REI+VRD
Sbjct: 540 AKDEMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLISEIVEREIVVRDV 599
Query: 553 TRFHHFKDGFCSCSDYW 569
RFH FK+G C+C DYW
Sbjct: 600 NRFHCFKNGSCTCRDYW 616
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 2/143 (1%)
Query: 219 VHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGA 278
+H L K +SDT L+ Y K ++ A +LF ++ ++VSW ++ISGY G
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 279 GEKALHLFDEMRHDG-MKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHY 337
+ AL +F +M D + P+ TF +V AC+ +G + + + G++
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIG-KNIHARLEISGLRRNIVVS 169
Query: 338 ACMVDLLGRAGRLPEAVDLIKSM 360
+ +VD+ G+ + A + SM
Sbjct: 170 SSLVDMYGKCNDVETARRVFDSM 192
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 337 bits (863), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 186/502 (37%), Positives = 272/502 (54%), Gaps = 48/502 (9%)
Query: 56 SARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGD 115
SARA + MEV D SWN+MI G + GL+GEA +F M E++ + + C
Sbjct: 280 SARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFA 339
Query: 116 LDAAVECFYAAPVRSVITWT----------AMITGYMKFGRVESAERLFREMSLKTLVTW 165
L + E A+ +I T A++ Y K G ++SA ++F M K +++W
Sbjct: 340 L-SRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISW 398
Query: 166 NAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCK 225
A++ G NG ++ LKLF +M G P+ + SVL + L+ L+ G+QVH K
Sbjct: 399 TALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIK 458
Query: 226 SPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHL 285
S S + SL++MY KCG L++A +F + +D+++W +I GYA++G
Sbjct: 459 SGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNG-------- 510
Query: 286 FDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLG 345
L++ +YF+ M +GI PEHYACM+DL G
Sbjct: 511 ---------------------------LLEDAQRYFDSMRTVYGITPGPEHYACMIDLFG 543
Query: 346 RAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQ 405
R+G + L+ M +P ++ +L A R H N++ E AAK L+EL+P++A YVQ
Sbjct: 544 RSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQ 603
Query: 406 LANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIHXX 465
L+N+Y+A R + A +RR MK + K PG SW+E +VH F S DR HP + I+
Sbjct: 604 LSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSK 663
Query: 466 XXXXXXXXXXAGYVPDLEFALHDVGEELKEQLLLWHSEKLAIAYGLLKVPLGLPIRVFKN 525
AGY D+ FALHD+ +E KE L +HSEKLA+A+GLL VP G PIR+ KN
Sbjct: 664 VDEMMLLIKEAGYFADMSFALHDLDKEGKELGLAYHSEKLAVAFGLLVVPSGAPIRIIKN 723
Query: 526 LRVCGDCHTAIKYIS--AIEGR 545
LRVCGDCH+A+K + AIEG+
Sbjct: 724 LRVCGDCHSAMKLLVTFAIEGK 745
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 131/248 (52%), Gaps = 2/248 (0%)
Query: 114 GDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYV 173
G +D A + F P R TW MI Y R+ AE+LFR +K ++WNA+I+GY
Sbjct: 42 GRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYC 101
Query: 174 ENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTT 233
++G + LF M G KPN +L SVL C++L L G+Q+H K+ D
Sbjct: 102 KSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVN 161
Query: 234 AGTSLISMYAKCGDLKEAWELFVQIP-RKDIVSWNAMISGYAQHGAGEKALHLFDEMRHD 292
L++MYA+C + EA LF + K+ V+W +M++GY+Q+G KA+ F ++R +
Sbjct: 162 VVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRRE 221
Query: 293 GMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPE 352
G + + TF +VL AC +GVQ +V+ G KT + ++D+ + +
Sbjct: 222 GNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKS-GFKTNIYVQSALIDMYAKCREMES 280
Query: 353 AVDLIKSM 360
A L++ M
Sbjct: 281 ARALLEGM 288
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 150/302 (49%), Gaps = 21/302 (6%)
Query: 19 KHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISG 78
K G ++ARQ+F+K+PE + ++N M+ + + + A F VK+T SWN +ISG
Sbjct: 40 KSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISG 99
Query: 79 YAQVGLMGEASMLF------AVMPE--------KNCVSWSAMVSGYVACGDLDAAVECFY 124
Y + G EA LF + P + C S ++ G G ++ +
Sbjct: 100 YCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGH---TIKTGF 156
Query: 125 AAPVRSVITWTAMITGYMKFGRVESAERLFREMS-LKTLVTWNAMIAGYVENGRAEDGLK 183
V V AM Y + R+ AE LF M K VTW +M+ GY +NG A ++
Sbjct: 157 DLDVNVVNGLLAM---YAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIE 213
Query: 184 LFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYA 243
F+ + G + N + SVL C+++SA ++G QVH + KS ++ ++LI MYA
Sbjct: 214 CFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYA 273
Query: 244 KCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVA 303
KC +++ A L + D+VSWN+MI G + G +AL +F M MK D T +
Sbjct: 274 KCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPS 333
Query: 304 VL 305
+L
Sbjct: 334 IL 335
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 114/420 (27%), Positives = 190/420 (45%), Gaps = 71/420 (16%)
Query: 3 VKSTVTWNSILSAFAKKHGNFEQARQLFEKIP----EPNTVSY-NIMLAC---------- 47
VK+T++WN+++S + K G+ +A LF ++ +PN + +++ C
Sbjct: 87 VKNTISWNALISGYCKS-GSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGE 145
Query: 48 --HLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMP-EKNCVSWS 104
H H G FD D N +++ YAQ + EA LF M EKN V+W+
Sbjct: 146 QIHGHTIKTG-----FDL----DVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWT 196
Query: 105 AMVSGYVACGDLDAAVECF------------YAAP----------------------VRS 130
+M++GY G A+ECF Y P V+S
Sbjct: 197 SMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKS 256
Query: 131 -----VITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLF 185
+ +A+I Y K +ESA L M + +V+WN+MI G V G + L +F
Sbjct: 257 GFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMF 316
Query: 186 KSMLESGAKPNALSLTSVLLGCSNLS--ALQLGKQVHQLVCKSPLSSDTTAGTSLISMYA 243
M E K + ++ S+ L C LS +++ H L+ K+ ++ +L+ MYA
Sbjct: 317 GRMHERDMKIDDFTIPSI-LNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYA 375
Query: 244 KCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVA 303
K G + A ++F + KD++SW A+++G +G+ ++AL LF MR G+ PD I +
Sbjct: 376 KRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTAS 435
Query: 304 VLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFK 363
VL A L++ G Q ++ G + +V + + G L +A + SM +
Sbjct: 436 VLSASAELTLLEFGQQVHGNYIKS-GFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIR 494
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 336 bits (861), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 186/547 (34%), Positives = 296/547 (54%), Gaps = 12/547 (2%)
Query: 35 EPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAV 94
EP N +L H+ + AR FD + ++ S+ ++ISG+ G EA LF +
Sbjct: 155 EPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKM 214
Query: 95 MPEK--NCVS--WSAMVSGYVACGDLDAAVECFYAAPVRSVITWT----AMITGYMKFGR 146
M E+ +C + ++ M+ G + + A V+ T +I Y K G
Sbjct: 215 MWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGD 274
Query: 147 VESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLG 206
+E A F M KT V WN +IAGY +G +E+ L L M +SG + +L+ ++
Sbjct: 275 IEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRI 334
Query: 207 CSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSW 266
+ L+ L+L KQ H + ++ S+ A T+L+ Y+K G + A +F ++PRK+I+SW
Sbjct: 335 STKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISW 394
Query: 267 NAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVR 326
NA++ GYA HG G A+ LF++M + P+ +TF+AVL AC ++GL + G + F M
Sbjct: 395 NALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSE 454
Query: 327 DFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAE 386
GIK + HYACM++LLGR G L EA+ I+ P K ++ LL ACR+ +NL+L
Sbjct: 455 VHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGR 514
Query: 387 FAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEV 446
A+ L + P YV + N+Y + + A + +++ + P +W+E+ +
Sbjct: 515 VVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQT 574
Query: 447 HEFRSSDRLHPELAS----IHXXXXXXXXXXXXAGYVPDLEFALHDVGEELKEQLLLWHS 502
H F S DR + I+ GY + + L DV E+ +E++ +HS
Sbjct: 575 HSFLSGDRFDSYNETVKRQIYQKVDELMEEISEYGYSEEEQHLLPDVDEKEEERVGRYHS 634
Query: 503 EKLAIAYGLLKVPLGLPIRVFKNLRVCGDCHTAIKYISAIEGREIIVRDTTRFHHFKDGF 562
EKLAIAYGL+ P P+++ +N R+C +CH +++IS + GRE++VRD +RFHHFK+G
Sbjct: 635 EKLAIAYGLVNTPEWNPLQITQNHRICKNCHKVVEFISLVTGREMVVRDASRFHHFKEGK 694
Query: 563 CSCSDYW 569
CSC YW
Sbjct: 695 CSCGGYW 701
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 137/341 (40%), Gaps = 94/341 (27%)
Query: 19 KHGNFEQARQLFEKIPEPNTVSYNIMLA------------------------CHLHHFGV 54
K G AR+LF++IPE N SY +++ C H F V
Sbjct: 170 KCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAV 229
Query: 55 ------GSARAFFDRM---------EVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKN 99
G + + V +T +I Y++ G + +A F MPEK
Sbjct: 230 MLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKT 289
Query: 100 CVSWSAMVSGYVACGDLDAAVECFY----------------------------------A 125
V+W+ +++GY G + A+ Y A
Sbjct: 290 TVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHA 349
Query: 126 APVRS-----VITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAED 180
+ +R+ ++ TA++ Y K+GRV++A +F ++ K +++WNA++ GY +GR D
Sbjct: 350 SLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTD 409
Query: 181 GLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLIS 240
+KLF+ M+ + PN ++ +VL C+ + G ++ LS G +
Sbjct: 410 AVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIF-------LSMSEVHGIKPRA 462
Query: 241 MYAKC--------GDLKEAWELFVQIPRKDIVS-WNAMISG 272
M+ C G L EA + P K V+ W A+++
Sbjct: 463 MHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNA 503
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 101/222 (45%), Gaps = 3/222 (1%)
Query: 148 ESAERLFREMSL-KTLVTWNAMIAGYVENGRAEDGLKLFKSM-LESGAKPNALSLTSVLL 205
ES +++ + + K+ VT + I V R + +LF+ + + K + +++
Sbjct: 72 ESKDQILDDTQISKSGVTICSQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVE 131
Query: 206 GCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVS 265
C L +++ K+V+ + + + ++ M+ KCG + +A LF +IP +++ S
Sbjct: 132 ACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYS 191
Query: 266 WNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMV 325
+ ++ISG+ G +A LF M + + TF +L A G + +G Q ++
Sbjct: 192 YYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQ-LHVCA 250
Query: 326 RDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPA 367
G+ ++D+ + G + +A + MP K A
Sbjct: 251 LKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVA 292
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 115/265 (43%), Gaps = 36/265 (13%)
Query: 4 KSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDR 63
+S + N+ L F K G + AR +F+K+P N +S+N ++ + +H A F++
Sbjct: 357 ESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEK 416
Query: 64 MEVKDTA----SWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVAC------ 113
M + A ++ ++S A GL + +F M E + + AM + AC
Sbjct: 417 MIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAM---HYACMIELLG 473
Query: 114 --GDLDAAVECFYAAPVRSVIT-WTAMITG-----YMKFGRVESAERLFREMSLKTLVTW 165
G LD A+ AP+++ + W A++ ++ GRV AE+L+ M + L +
Sbjct: 474 RDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRV-VAEKLY-GMGPEKLGNY 531
Query: 166 NAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCK 225
M Y G+ + + +++ G S++ C + +++G Q H +
Sbjct: 532 VVMYNMYNSMGKTAEAAGVLETLESKG--------LSMMPAC---TWVEVGDQTHSFLSG 580
Query: 226 SPLSSDTTAGTSLISMYAKCGDLKE 250
D+ T +Y K +L E
Sbjct: 581 DRF--DSYNETVKRQIYQKVDELME 603
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 335 bits (858), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 184/474 (38%), Positives = 269/474 (56%), Gaps = 15/474 (3%)
Query: 5 STVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRM 64
S V S L K GN A+++F+++ + N VS+N ++ C + A F M
Sbjct: 185 SDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMM 244
Query: 65 -EVK---DTASWNTMISGYAQVGLM--GEASMLFAVMPEK---NCVSWSAMVSGYVACGD 115
E + D + ++IS A + + G+ V +K + + +A V Y C
Sbjct: 245 LESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSR 304
Query: 116 LDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVEN 175
+ A F + P+R+VI T+MI+GY ++A +F +M+ + +V+WNA+IAGY +N
Sbjct: 305 IKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQN 364
Query: 176 GRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCK------SPLS 229
G E+ L LF + P S ++L C++L+ L LG Q H V K S
Sbjct: 365 GENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEE 424
Query: 230 SDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEM 289
D G SLI MY KCG ++E + +F ++ +D VSWNAMI G+AQ+G G +AL LF EM
Sbjct: 425 DDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREM 484
Query: 290 RHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGR 349
G KPD IT + VL AC HAG V+ G YF+ M RDFG+ +HY CMVDLLGRAG
Sbjct: 485 LESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGF 544
Query: 350 LPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANV 409
L EA +I+ MP +P I+G+LL AC++H+N+ L ++ A+ LLE++PS++ YV L+N+
Sbjct: 545 LEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNM 604
Query: 410 YAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIH 463
YA +WE V +R+SM++ V K PG SWI+I H F D+ HP IH
Sbjct: 605 YAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIH 658
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 162/304 (53%), Gaps = 5/304 (1%)
Query: 106 MVSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTW 165
++ Y CG L+ + F P R++ TW +++TG K G ++ A+ LFR M + TW
Sbjct: 61 LIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTW 120
Query: 166 NAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCK 225
N+M++G+ ++ R E+ L F M + G N S SVL CS L+ + G QVH L+ K
Sbjct: 121 NSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAK 180
Query: 226 SPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHL 285
SP SD G++L+ MY+KCG++ +A +F ++ +++VSWN++I+ + Q+G +AL +
Sbjct: 181 SPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDV 240
Query: 286 FDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLG 345
F M ++PD +T +V+ AC + +G + +V++ ++ VD+
Sbjct: 241 FQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYA 300
Query: 346 RAGRLPEAVDLIKSMPFKPHPA----IFGTLLGACRIHKNLDLAEFAAKNLLELDPSSAT 401
+ R+ EA + SMP + A I G + A L + A +N++ + A
Sbjct: 301 KCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIA- 359
Query: 402 GYVQ 405
GY Q
Sbjct: 360 GYTQ 363
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 188/350 (53%), Gaps = 41/350 (11%)
Query: 10 NSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDT 69
N ++ A++K G+ E RQ+F+K+P+ N ++N ++ + A + F M +D
Sbjct: 59 NRLIDAYSK-CGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQ 117
Query: 70 ASWNTMISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSGYVACGDLDAAVEC--- 122
+WN+M+SG+AQ EA FA+M ++ N S+++++S D++ V+
Sbjct: 118 CTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSL 177
Query: 123 FYAAPVRS-VITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDG 181
+P S V +A++ Y K G V A+R+F EM + +V+WN++I + +NG A +
Sbjct: 178 IAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEA 237
Query: 182 LKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKS-PLSSDTTAGTSLIS 240
L +F+ MLES +P+ ++L SV+ C++LSA+++G++VH V K+ L +D + +
Sbjct: 238 LDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVD 297
Query: 241 MYAKCGDLKEAWELFVQIP-------------------------------RKDIVSWNAM 269
MYAKC +KEA +F +P +++VSWNA+
Sbjct: 298 MYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNAL 357
Query: 270 ISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQ 319
I+GY Q+G E+AL LF ++ + + P +F +L AC + LG+Q
Sbjct: 358 IAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQ 407
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 83/184 (45%), Gaps = 33/184 (17%)
Query: 208 SNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLK------------------ 249
S LSA+ + + VH V KS S++ LI Y+KCG L+
Sbjct: 32 SKLSAIYV-RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWN 90
Query: 250 -------------EAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKP 296
EA LF +P +D +WN+M+SG+AQH E+AL F M +G
Sbjct: 91 SVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVL 150
Query: 297 DWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDL 356
+ +F +VL AC+ ++ GVQ +++ + + + +VD+ + G + +A +
Sbjct: 151 NEYSFASVLSACSGLNDMNKGVQVHSLIAKS-PFLSDVYIGSALVDMYSKCGNVNDAQRV 209
Query: 357 IKSM 360
M
Sbjct: 210 FDEM 213
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 332 bits (851), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 181/471 (38%), Positives = 270/471 (57%), Gaps = 10/471 (2%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYN------IMLACH-LHHFG 53
M ++ +TW +++ + K G FE LF ++ + V N + AC +
Sbjct: 234 MTERNVITWTAMIDGYFKA-GFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYR 292
Query: 54 VGSA-RAFFDRMEVK-DTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYV 111
GS RM ++ D N+++S Y+++G MGEA +F VM K+ VSW+++++G V
Sbjct: 293 EGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLV 352
Query: 112 ACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAG 171
+ A E F P + +++WT MI G+ G + LF M K +TW AMI+
Sbjct: 353 QRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISA 412
Query: 172 YVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSD 231
+V NG E+ L F ML+ PN+ + +SVL ++L+ L G Q+H V K + +D
Sbjct: 413 FVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVND 472
Query: 232 TTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRH 291
+ SL+SMY KCG+ +A+++F I +IVS+N MISGY+ +G G+KAL LF +
Sbjct: 473 LSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLES 532
Query: 292 DGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLP 351
G +P+ +TF+A+L AC H G VDLG +YF M + I+ P+HYACMVDLLGR+G L
Sbjct: 533 SGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLD 592
Query: 352 EAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYA 411
+A +LI +MP KPH ++G+LL A + H +DLAE AAK L+EL+P SAT YV L+ +Y+
Sbjct: 593 DASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYS 652
Query: 412 AQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASI 462
+ RI K ++ K PG SWI + EVH F + D L I
Sbjct: 653 IIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEI 703
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 121/382 (31%), Positives = 197/382 (51%), Gaps = 17/382 (4%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHH-FGVGSARA 59
M +S V+W +++SA+A+ +G +A Q+F+++P T SYN M+ + + +G A
Sbjct: 76 MSNRSIVSWIAMISAYAE-NGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYE 134
Query: 60 FFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEK--NCVSWSAMVSGYVACGDLD 117
F + K+ S+ TMI+G+ + G EA L+A P K + V+ + ++SGY+ G +
Sbjct: 135 LFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWN 194
Query: 118 AAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGR 177
AV F V+ V++ ++M+ GY K GR+ A LF M+ + ++TW AMI GY + G
Sbjct: 195 EAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGF 254
Query: 178 AEDGLKLFKSMLESG-AKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGT 236
EDG LF M + G K N+ +L + C + + G Q+H LV + PL D G
Sbjct: 255 FEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGN 314
Query: 237 SLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKP 296
SL+SMY+K G + EA +F + KD VSWN++I+G Q +A LF++M
Sbjct: 315 SLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPG----K 370
Query: 297 DWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDL 356
D +++ ++ + G + V+ F MM I + M+ G EA+
Sbjct: 371 DMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNIT-----WTAMISAFVSNGYYEEALCW 425
Query: 357 IKSMPFK---PHPAIFGTLLGA 375
M K P+ F ++L A
Sbjct: 426 FHKMLQKEVCPNSYTFSSVLSA 447
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 104/237 (43%), Gaps = 30/237 (12%)
Query: 130 SVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSM- 188
++ + I+ + + G ++ AE +FR+MS +++V+W AMI+ Y ENG+ ++F M
Sbjct: 49 AIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMP 108
Query: 189 LESGAKPNALSLTSVLLGCSNLSALQLGKQVHQ------------------------LVC 224
+ NA+ + C A +L + + L
Sbjct: 109 VRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYA 168
Query: 225 KSPLS-SDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKAL 283
++P+ D+ A L+S Y + G EA +F + K++VS ++M+ GY + G A
Sbjct: 169 ETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDAR 228
Query: 284 HLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACM 340
LFD M + IT+ A++ AG + G F M ++ +K A M
Sbjct: 229 SLFDRMTERNV----ITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVM 281
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 66/139 (47%), Gaps = 10/139 (7%)
Query: 236 TSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMK 295
S IS +A+ G+L+EA +F Q+ + IVSW AMIS YA++G KA +FDEM
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEM------ 107
Query: 296 PDWITF-VAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAV 354
P +T ++ DLG Y + D K YA M+ RAGR EA
Sbjct: 108 PVRVTTSYNAMITAMIKNKCDLGKAY--ELFCDIPEKNAVS-YATMITGFVRAGRFDEAE 164
Query: 355 DLIKSMPFKPHPAIFGTLL 373
L P K ++ +L
Sbjct: 165 FLYAETPVKFRDSVASNVL 183
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 331 bits (849), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 175/415 (42%), Positives = 253/415 (60%), Gaps = 5/415 (1%)
Query: 52 FG-VGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPE-KNCVSWSAMVSG 109
FG +G AR FD M + SW +ISGY + G + AS LF MP K+ V ++AM+ G
Sbjct: 126 FGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDG 185
Query: 110 YVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMI 169
+V GD+ +A F ++VITWT MI GY +++A +LF M + LV+WN MI
Sbjct: 186 FVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMI 245
Query: 170 AGYVENGRAEDGLKLFKSMLESGA-KPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPL 228
GY +N + ++G++LF+ M + + P+ +++ SVL S+ AL LG+ H V + L
Sbjct: 246 GGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKL 305
Query: 229 SSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDE 288
T+++ MY+KCG++++A +F ++P K + SWNAMI GYA +G AL LF
Sbjct: 306 DKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVT 365
Query: 289 MRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAG 348
M + KPD IT +AV+ ACNH GLV+ G ++F++M R+ G+ K EHY CMVDLLGRAG
Sbjct: 366 MMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHVM-REMGLNAKIEHYGCMVDLLGRAG 423
Query: 349 RLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLAN 408
L EA DLI +MPF+P+ I + L AC +K+++ AE K +EL+P + YV L N
Sbjct: 424 SLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRN 483
Query: 409 VYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIH 463
+YAA RW+ ++ M++N+ K G S IEI+ V EF S D HP SIH
Sbjct: 484 LYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIH 538
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 151/324 (46%), Gaps = 44/324 (13%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIPE-PNTVSYNIMLACHLHHFGVGSARA 59
M +S V+W +++S + + G + A +LF+++P + V YN M+ + + SAR
Sbjct: 139 MPHRSEVSWTALISGYIR-CGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARR 197
Query: 60 FFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYV-------- 111
FD M K +W TMI GY + + A LF MPE+N VSW+ M+ GY
Sbjct: 198 LFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEG 257
Query: 112 --------ACGDLDAA----------------------VECFYAAPV--RSVITWTAMIT 139
A LD CF + V TA++
Sbjct: 258 IRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILD 317
Query: 140 GYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALS 199
Y K G +E A+R+F EM K + +WNAMI GY NG A L LF +M+ KP+ ++
Sbjct: 318 MYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIE-EKPDEIT 376
Query: 200 LTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIP 259
+ +V+ C++ ++ G++ ++ + L++ ++ + + G LKEA +L +P
Sbjct: 377 MLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMP 436
Query: 260 -RKDIVSWNAMISGYAQHGAGEKA 282
+ + ++ +S Q+ E+A
Sbjct: 437 FEPNGIILSSFLSACGQYKDIERA 460
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 148/344 (43%), Gaps = 27/344 (7%)
Query: 35 EPNTVSYNIMLACHLHHFGVGSARAFFD-RMEVKDTASWNTMISGYAQVGLMGEASMLFA 93
E N + L G+G AR FD R + D+ N+MI Y + ++ L+
Sbjct: 7 ETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYR 66
Query: 94 VMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPVRSVITW-----------TAMITGYM 142
+ ++ C + + + C Y W T ++ Y
Sbjct: 67 DLRKETCFAPDNFT--FTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYA 124
Query: 143 KFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSM--LESGAKPNALSL 200
KFG++ A F EM ++ V+W A+I+GY+ G + KLF M ++ NA+
Sbjct: 125 KFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMD 184
Query: 201 TSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPR 260
V G + + H+ V T++I Y D+ A +LF +P
Sbjct: 185 GFVKSGDMTSARRLFDEMTHKTV---------ITWTTMIHGYCNIKDIDAARKLFDAMPE 235
Query: 261 KDIVSWNAMISGYAQHGAGEKALHLFDEMR-HDGMKPDWITFVAVLLACNHAGLVDLGVQ 319
+++VSWN MI GY Q+ ++ + LF EM+ + PD +T ++VL A + G + LG +
Sbjct: 236 RNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLG-E 294
Query: 320 YFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFK 363
+ + V+ + K + ++D+ + G + +A + MP K
Sbjct: 295 WCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEK 338
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 330 bits (845), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 183/456 (40%), Positives = 263/456 (57%), Gaps = 9/456 (1%)
Query: 3 VKSTVTWNSI-----LSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSA 57
+K T W+ + L K G +RQ+F+++P+ ++VSYN M+ ++ + SA
Sbjct: 147 LKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSA 206
Query: 58 RAFFDRM--EVKDTASWNTMISGYAQVGL-MGEASMLFAVMPEKNCVSWSAMVSGYVACG 114
R FD M E+K+ SWN+MISGYAQ + AS LFA MPEK+ +SW++M+ GYV G
Sbjct: 207 RELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHG 266
Query: 115 DLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVE 174
++ A F P R V+TW MI GY K G V A+ LF +M + +V +N+M+AGYV+
Sbjct: 267 RIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQ 326
Query: 175 NGRAEDGLKLFKSM-LESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTT 233
N + L++F M ES P+ +L VL + L L +H + +
Sbjct: 327 NKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGK 386
Query: 234 AGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDG 293
G +LI MY+KCG ++ A +F I K I WNAMI G A HG GE A + ++
Sbjct: 387 LGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLS 446
Query: 294 MKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEA 353
+KPD ITFV VL AC+H+GLV G+ F +M R I+ + +HY CMVD+L R+G + A
Sbjct: 447 LKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELA 506
Query: 354 VDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQ 413
+LI+ MP +P+ I+ T L AC HK + E AK+L+ + + YV L+N+YA+
Sbjct: 507 KNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASF 566
Query: 414 NRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEF 449
W+ V R+R MKE K+ K PG SWIE+ VHEF
Sbjct: 567 GMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEF 602
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 144/318 (45%), Gaps = 42/318 (13%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAF 60
M++K+ ++WNS++S +A+ + A +LF +PE + +S+N M+ ++ H + A+
Sbjct: 215 MEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGL 274
Query: 61 FDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAV 120
FD M +D +W TMI GYA++G + A LF MP ++ V++++M++GYV A+
Sbjct: 275 FDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEAL 334
Query: 121 ECF-------YAAPVRSVITW---------------------------------TAMITG 140
E F + P + + A+I
Sbjct: 335 EIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDM 394
Query: 141 YMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSL 200
Y K G ++ A +F + K++ WNAMI G +G E + + KP+ ++
Sbjct: 395 YSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITF 454
Query: 201 TSVLLGCSNLSALQLGKQVHQLV-CKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIP 259
VL CS+ ++ G +L+ K + ++ + ++ G ++ A L ++P
Sbjct: 455 VGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMP 514
Query: 260 -RKDIVSWNAMISGYAQH 276
+ V W ++ + H
Sbjct: 515 VEPNDVIWRTFLTACSHH 532
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 169/406 (41%), Gaps = 88/406 (21%)
Query: 47 CHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVS---- 102
C H + V S F EV+D WN +I ++ G ++L + +N VS
Sbjct: 68 CVFHEYHVCS----FSFGEVEDPFLWNAVIKSHSH-GKDPRQALLLLCLMLENGVSVDKF 122
Query: 103 ------------------------------WS------AMVSGYVACGDLDAAVECFYAA 126
WS ++ Y+ CG L + + F
Sbjct: 123 SLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRM 182
Query: 127 PVRSVITWTAMITGYMKFGRVESAERLFR--EMSLKTLVTWNAMIAGYVENGRAEDGLKL 184
P R +++ +MI GY+K G + SA LF M +K L++WN+MI+GY + DG+ +
Sbjct: 183 PKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQ---TSDGVDI 239
Query: 185 FKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAK 244
+ + + +S S++ G ++ K + ++ + D ++I YAK
Sbjct: 240 ASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPR----RDVVTWATMIDGYAK 295
Query: 245 CGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDG-MKPDWITFVA 303
G + A LF Q+P +D+V++N+M++GY Q+ +AL +F +M + + PD T V
Sbjct: 296 LGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVI 355
Query: 304 VLLACNHAGLVD-------------------LGVQYFNM----------MVRDFGIKTKP 334
VL A G + LGV +M M+ GI+ K
Sbjct: 356 VLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKS 415
Query: 335 -EHYACMVDLLGRAGRLPEAVDL---IKSMPFKPHPAIFGTLLGAC 376
+H+ M+ L G A D+ I+ + KP F +L AC
Sbjct: 416 IDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNAC 461
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 324 bits (830), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 161/412 (39%), Positives = 240/412 (58%), Gaps = 2/412 (0%)
Query: 54 VGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVAC 113
+ SA F M K+ W +MI+GY + A F + PE++ V W+ M+SGY+
Sbjct: 44 IASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEM 103
Query: 114 GDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYV 173
G++ A F P R V++W ++ GY G +E+ ER+F +M + + +WN +I GY
Sbjct: 104 GNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYA 163
Query: 174 ENGRAEDGLKLFKSMLESGAK-PNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSS-D 231
+NGR + L FK M++ G+ PN ++T VL C+ L A GK VH+ + D
Sbjct: 164 QNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVD 223
Query: 232 TTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRH 291
+LI MY KCG ++ A E+F I R+D++SWN MI+G A HG G +AL+LF EM++
Sbjct: 224 VNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKN 283
Query: 292 DGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLP 351
G+ PD +TFV VL AC H GLV+ G+ YFN M DF I + EH C+VDLL RAG L
Sbjct: 284 SGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLT 343
Query: 352 EAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYA 411
+AV+ I MP K I+ TLLGA +++K +D+ E A + L++L+P + +V L+N+Y
Sbjct: 344 QAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYG 403
Query: 412 AQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIH 463
R++ AR++ +M++ K G SWIE + +F SS HP +
Sbjct: 404 DAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTEELQ 455
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 321 bits (823), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 196/620 (31%), Positives = 313/620 (50%), Gaps = 57/620 (9%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIP---EPNTVSYNIML-AC-HLHHFGVG 55
M + V+WNS++S + F E + +P+ S L AC H++ +G
Sbjct: 191 MPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMG 250
Query: 56 S---ARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVA 112
A R+E D +++ Y++ G + A +F M ++N V+W+ M+ Y
Sbjct: 251 KEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYAR 310
Query: 113 CGDLDAAVECFYAAPVRS-----VITW-------------------------------TA 136
G + A CF ++ VIT TA
Sbjct: 311 NGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLPHMVLETA 370
Query: 137 MITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPN 196
+I Y + G+++SAE +F M+ K +++WN++IA YV+NG+ L+LF+ + +S P+
Sbjct: 371 LIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPD 430
Query: 197 ALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFV 256
+ ++ S+L + +L G+++H + KS S+T SL+ MYA CGDL++A + F
Sbjct: 431 STTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFN 490
Query: 257 QIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDL 316
I KD+VSWN++I YA HG G ++ LF EM + P+ TF ++L AC+ +G+VD
Sbjct: 491 HILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDE 550
Query: 317 GVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGAC 376
G +YF M R++GI EHY CM+DL+GR G A ++ MPF P I+G+LL A
Sbjct: 551 GWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNAS 610
Query: 377 RIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPG 436
R HK++ +AEFAA+ + +++ + YV L N+YA RWE V RI+ M+ + +
Sbjct: 611 RNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSS 670
Query: 437 YSWIEISSEVHEFRSSDRLHPELASIHXXXXXXXXXXXXAGYVPDLEFALHDVGEELKEQ 496
S +E + H F + DR H I+ + V + + +H V E
Sbjct: 671 RSTVEAKGKSHVFTNGDRSHVATNKIY------EVLDVVSRMVGEEDIYVHCVSRLRPET 724
Query: 497 LL-------LWHSEKLAIAYGLLKVPLGLPIRVFKNLRVCGDCHTAIKYISAIEGREIIV 549
L+ HS +LA +GL+ G + V N R+C CH ++ S + REI+V
Sbjct: 725 LVKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEFLEKASRLTRREIVV 784
Query: 550 RDTTRFHHFKDGFCSCSDYW 569
D+ FHHF +G CSC +YW
Sbjct: 785 GDSKIFHHFSNGRCSCGNYW 804
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 156/317 (49%), Gaps = 15/317 (4%)
Query: 57 ARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMP----EKNCVSWSAMVSGYVA 112
A FD M D WN MI G+ GL EA ++ M + + ++ ++
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142
Query: 113 CGDLDAAVE----CFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAM 168
L+ + V V ++I+ YMK G AE++F EM + +V+WN+M
Sbjct: 143 ISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSM 202
Query: 169 IAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPL 228
I+GY+ G L LFK ML+ G KP+ S S L CS++ + ++GK++H +S +
Sbjct: 203 ISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRI 262
Query: 229 SS-DTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFD 287
+ D TS++ MY+K G++ A +F + +++IV+WN MI YA++G A F
Sbjct: 263 ETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQ 322
Query: 288 EM-RHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGR 346
+M +G++PD IT + +L A + +++ + M R F E ++D+ G
Sbjct: 323 KMSEQNGLQPDVITSINLLPA---SAILEGRTIHGYAMRRGFLPHMVLE--TALIDMYGE 377
Query: 347 AGRLPEAVDLIKSMPFK 363
G+L A + M K
Sbjct: 378 CGQLKSAEVIFDRMAEK 394
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 98/176 (55%)
Query: 135 TAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAK 194
T + G+ +E A +LF EM+ WN MI G+ G + ++ + M+ +G K
Sbjct: 68 TRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVK 127
Query: 195 PNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWEL 254
+ + V+ + +S+L+ GK++H +V K SD SLIS+Y K G +A ++
Sbjct: 128 ADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKV 187
Query: 255 FVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNH 310
F ++P +DIVSWN+MISGY G G +L LF EM G KPD + ++ L AC+H
Sbjct: 188 FEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSH 243
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 321 bits (823), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 175/428 (40%), Positives = 256/428 (59%), Gaps = 9/428 (2%)
Query: 21 GNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYA 80
G E A++ F+ I E NTVS+N +L +L + AR FD++ KD SWN +IS YA
Sbjct: 153 GYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYA 212
Query: 81 QVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPVRSVITWTAMITG 140
+ G MG A LF+ MP K+ SW+ ++ GYV C ++ A F A P ++ ++W MI+G
Sbjct: 213 KKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISG 272
Query: 141 YMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGA--KPNAL 198
Y K G V+SAE LFR MS K + ++AMIA Y +NG+ +D LKLF MLE + +P+ +
Sbjct: 273 YTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEI 332
Query: 199 SLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQI 258
+L+SV+ S L G V + + + D TSLI +Y K GD +A+++F +
Sbjct: 333 TLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNL 392
Query: 259 PRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGV 318
+KD VS++AMI G +G +A LF M + P+ +TF +L A +H+GLV G
Sbjct: 393 NKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGY 452
Query: 319 QYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRI 378
+ FN M +D ++ +HY MVD+LGRAGRL EA +LIKSMP +P+ ++G LL A +
Sbjct: 453 KCFNSM-KDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGL 511
Query: 379 HKNLDLAEFAAKNL--LELDPSSATGYV-QLANVYAAQNRWEHVARIRRSMKENKVVKAP 435
H N++ E A + LE DP TGY+ LA +Y++ RW+ +R S+KE K+ K
Sbjct: 512 HNNVEFGEIACSHCVKLETDP---TGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTL 568
Query: 436 GYSWIEIS 443
G SW+E S
Sbjct: 569 GCSWVEGS 576
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 165/360 (45%), Gaps = 44/360 (12%)
Query: 75 MISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPVRSVITW 134
++ Y+++G + A F + EKN VSW++++ GY+ G+LD A F P + ++W
Sbjct: 145 LVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSW 204
Query: 135 TAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAK 194
+I+ Y K G + +A LF M LK+ +WN +I GYV N R +KL ++ ++ +
Sbjct: 205 NLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYV-NCRE---MKLARTYFDAMPQ 260
Query: 195 PNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWEL 254
N +S +++ G Y K GD++ A EL
Sbjct: 261 KNGVSWITMISG-----------------------------------YTKLGDVQSAEEL 285
Query: 255 FVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEM--RHDGMKPDWITFVAVLLACNHAG 312
F + +KD + ++AMI+ Y Q+G + AL LF +M R+ ++PD IT +V+ A + G
Sbjct: 286 FRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLG 345
Query: 313 LVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTL 372
G + + + GIK ++DL + G +A + ++ K + +
Sbjct: 346 NTSFGT-WVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLN-KKDTVSYSAM 403
Query: 373 LGACRIHKNLDLAEFAAKNLLELD-PSSATGYVQLANVYAAQNRWEHVARIRRSMKENKV 431
+ C I+ A ++E P + + L + Y+ + + SMK++ +
Sbjct: 404 IMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNL 463
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 149/319 (46%), Gaps = 43/319 (13%)
Query: 4 KSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDR 63
K V+WN I+S++AKK G+ A LF +P + S+NI++ +++ + AR +FD
Sbjct: 199 KDAVSWNLIISSYAKK-GDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDA 257
Query: 64 MEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECF 123
M K+ SW TMISGY ++G + A LF +M +K+ + + AM++ Y G A++ F
Sbjct: 258 MPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLF 317
Query: 124 --------YAAP----VRSVI------------TW-----------------TAMITGYM 142
Y P + SV+ TW T++I YM
Sbjct: 318 AQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYM 377
Query: 143 KFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTS 202
K G A ++F ++ K V+++AMI G NG A + LF +M+E PN ++ T
Sbjct: 378 KGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTG 437
Query: 203 VLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIP-RK 261
+L S+ +Q G + + L ++ M + G L+EA+EL +P +
Sbjct: 438 LLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQP 497
Query: 262 DIVSWNAMISGYAQHGAGE 280
+ W A++ H E
Sbjct: 498 NAGVWGALLLASGLHNNVE 516
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 75/143 (52%)
Query: 147 VESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLG 206
V +R+ + + +W ++ ++ + ++ + ++ M SG P++ ++TSVL
Sbjct: 54 VTYVKRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRA 113
Query: 207 CSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSW 266
C + + GK +H K+ L T L+ +Y++ G ++ A + F I K+ VSW
Sbjct: 114 CGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSW 173
Query: 267 NAMISGYAQHGAGEKALHLFDEM 289
N+++ GY + G ++A +FD++
Sbjct: 174 NSLLHGYLESGELDEARRVFDKI 196
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 318 bits (815), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 174/565 (30%), Positives = 290/565 (51%), Gaps = 80/565 (14%)
Query: 6 TVTWNSILSAFAKKHGNFEQARQLFEKIPE---PNTVSYNIMLA---------------- 46
V WN+++ ++K + E R + E P++ ++ +L
Sbjct: 99 VVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLH 158
Query: 47 CHLHHFGVGS--------------------ARAFFDRMEVKDTASWNTMISGYAQVGLMG 86
CH+ FG+GS AR FDR +D SWN MISGY ++
Sbjct: 159 CHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYE 218
Query: 87 EASMLFAVMPEKNCVS----------------------------------------WSAM 106
E+ L M E+N VS +A+
Sbjct: 219 ESIELLVEM-ERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENAL 277
Query: 107 VSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWN 166
V+ Y ACG++D AV F + R VI+WT+++ GY++ G ++ A F +M ++ ++W
Sbjct: 278 VNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWT 337
Query: 167 AMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKS 226
MI GY+ G + L++F+ M +G P+ ++ SVL C++L +L++G+ + + K+
Sbjct: 338 IMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKN 397
Query: 227 PLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLF 286
+ +D G +LI MY KCG ++A ++F + ++D +W AM+ G A +G G++A+ +F
Sbjct: 398 KIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVF 457
Query: 287 DEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGR 346
+M+ ++PD IT++ VL ACNH+G+VD ++F M D I+ HY CMVD+LGR
Sbjct: 458 FQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGR 517
Query: 347 AGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQL 406
AG + EA ++++ MP P+ ++G LLGA R+H + +AE AAK +LEL+P + Y L
Sbjct: 518 AGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALL 577
Query: 407 ANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIHXXX 466
N+YA RW+ + +RR + + + K PG+S IE++ HEF + D+ H + I+
Sbjct: 578 CNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKL 637
Query: 467 XXXXXXXXXAGYVPDLEFALHDVGE 491
A Y+PD L + G+
Sbjct: 638 EELAQESTFAAYLPDTSELLFEAGD 662
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 138/326 (42%), Gaps = 44/326 (13%)
Query: 34 PEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFA 93
P P + C V A F ++ D WN MI G+++V GE L+
Sbjct: 64 PNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYL 123
Query: 94 VMPEKNCVSWSAMV----------SGYVACGD-LDAAVECFYAAPVRSVITWTAMITGYM 142
M ++ S G +ACG L V F ++ A++ Y
Sbjct: 124 NMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGS--NLYVQNALVKMYS 181
Query: 143 KFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTS 202
G ++ A +F + + +WN MI+GY E+ ++L M + P +++L
Sbjct: 182 LCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLL 241
Query: 203 VLLGCSNLSALQLGKQVHQLV--CKSPLS-----------------------------SD 231
VL CS + L K+VH+ V CK+ S D
Sbjct: 242 VLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARD 301
Query: 232 TTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRH 291
+ TS++ Y + G+LK A F Q+P +D +SW MI GY + G ++L +F EM+
Sbjct: 302 VISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQS 361
Query: 292 DGMKPDWITFVAVLLACNHAGLVDLG 317
GM PD T V+VL AC H G +++G
Sbjct: 362 AGMIPDEFTMVSVLTACAHLGSLEIG 387
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 111/219 (50%), Gaps = 6/219 (2%)
Query: 145 GRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVL 204
G V A +LF ++ +V WN MI G+ + +G++L+ +ML+ G P++ + +L
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 205 LGCS-NLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDI 263
G + AL GK++H V K L S+ +L+ MY+ CG + A +F + ++D+
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDV 201
Query: 264 VSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNM 323
SWN MISGY + E+++ L EM + + P +T + VL AC+ DL +
Sbjct: 202 FSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEY 261
Query: 324 MVRDFGIKTKPEHY--ACMVDLLGRAGRLPEAVDLIKSM 360
+ KT+P +V+ G + AV + +SM
Sbjct: 262 VSE---CKTEPSLRLENALVNAYAACGEMDIAVRIFRSM 297
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 316 bits (810), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 181/495 (36%), Positives = 274/495 (55%), Gaps = 16/495 (3%)
Query: 7 VTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHL--HHF---GVGSARAFF 61
+T++S+L + +K N E +Q+ I +++S +I L L +F GV A+ F
Sbjct: 341 ITFSSLLPSVSK-FENLEYCKQIHCYIMR-HSISLDIFLTSALIDAYFKCRGVSMAQNIF 398
Query: 62 DRMEVKDTASWNTMISGYAQVGLMGEASMLF------AVMPEKNCVSWSAMVSGYVACGD 115
+ D + MISGY GL ++ +F + P + + V G +
Sbjct: 399 SQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALK 458
Query: 116 LDAAVECFYAAP--VRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYV 173
L + F A+I Y K GR+ A +F +S + +V+WN+MI
Sbjct: 459 LGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCA 518
Query: 174 ENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTT 233
++ + +F+ M SG + +S+++ L C+NL + GK +H + K L+SD
Sbjct: 519 QSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVY 578
Query: 234 AGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEM-RHD 292
+ ++LI MYAKCG+LK A +F + K+IVSWN++I+ HG + +L LF EM
Sbjct: 579 SESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKS 638
Query: 293 GMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPE 352
G++PD ITF+ ++ +C H G VD GV++F M D+GI+ + EHYAC+VDL GRAGRL E
Sbjct: 639 GIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTE 698
Query: 353 AVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAA 412
A + +KSMPF P ++GTLLGACR+HKN++LAE A+ L++LDPS++ YV ++N +A
Sbjct: 699 AYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHAN 758
Query: 413 QNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIHXXXXXXXXX 472
WE V ++R MKE +V K PGYSWIEI+ H F S D HPE + I+
Sbjct: 759 AREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGE 818
Query: 473 XXXAGYVPDLEFALH 487
GY+P LH
Sbjct: 819 LRLEGYIPQPYLPLH 833
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 203/433 (46%), Gaps = 64/433 (14%)
Query: 4 KSTVTWNSILSAFAKKHGNFEQARQLFEKIP----EPNTVSYN-----------IMLACH 48
K V WN +L+ +AK G + + F + PN V+++ I L
Sbjct: 202 KDCVIWNVMLNGYAK-CGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQ 260
Query: 49 LHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVS 108
LH V S F ++ N+++S Y++ G +AS LF +M + V+W+ M+S
Sbjct: 261 LHGLVVVSGVDFEGSIK-------NSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMIS 313
Query: 109 GYVACGDLDAAVECFY----AAPVRSVITWT----------------------------- 135
GYV G ++ ++ FY + + IT++
Sbjct: 314 GYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISL 373
Query: 136 ------AMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSML 189
A+I Y K V A+ +F + + +V + AMI+GY+ NG D L++F+ ++
Sbjct: 374 DIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLV 433
Query: 190 ESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLK 249
+ PN ++L S+L L AL+LG+++H + K + G ++I MYAKCG +
Sbjct: 434 KVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMN 493
Query: 250 EAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACN 309
A+E+F ++ ++DIVSWN+MI+ AQ A+ +F +M G+ D ++ A L AC
Sbjct: 494 LAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACA 553
Query: 310 HAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIF 369
+ G M++ + + + ++D+ + G L A+++ K+M K + +
Sbjct: 554 NLPSESFGKAIHGFMIKH-SLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEK-NIVSW 611
Query: 370 GTLLGACRIHKNL 382
+++ AC H L
Sbjct: 612 NSIIAACGNHGKL 624
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 189/408 (46%), Gaps = 51/408 (12%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKI------PEPNTVSYNIMLACHLHHF-G 53
++ S WNSI+S+F + +G QA + K+ P+ +T + L +F G
Sbjct: 98 LRRSSIRPWNSIISSFVR-NGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKG 156
Query: 54 VG--SARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYV 111
+ S M+ + + +++I Y + G + S LF + +K+CV W+ M++GY
Sbjct: 157 IDFLSDTVSSLGMDCNEFVA-SSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYA 215
Query: 112 ACGDLDAAVECFYAAPVRSV----ITW--------------------------------- 134
CG LD+ ++ F + + +T+
Sbjct: 216 KCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGS 275
Query: 135 --TAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESG 192
++++ Y K GR + A +LFR MS VTWN MI+GYV++G E+ L F M+ SG
Sbjct: 276 IKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSG 335
Query: 193 AKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAW 252
P+A++ +S+L S L+ KQ+H + + +S D ++LI Y KC + A
Sbjct: 336 VLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQ 395
Query: 253 ELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAG 312
+F Q D+V + AMISGY +G +L +F + + P+ IT V++L
Sbjct: 396 NIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILL 455
Query: 313 LVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSM 360
+ LG + +++ G + ++D+ + GR+ A ++ + +
Sbjct: 456 ALKLGRELHGFIIKK-GFDNRCNIGCAVIDMYAKCGRMNLAYEIFERL 502
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 82/259 (31%), Positives = 138/259 (53%), Gaps = 18/259 (6%)
Query: 61 FDRMEVKDTA--SWNTMISGYAQVGLMGEA------SMLFAVMPEKNCVSWSAMVSGYVA 112
F R++++ ++ WN++IS + + GL+ +A + F V P+ + ++ +V VA
Sbjct: 93 FYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVS--TFPCLVKACVA 150
Query: 113 CGDLDAAVECFYAAPVRSV------ITWTAMITGYMKFGRVESAERLFREMSLKTLVTWN 166
+ F + V S+ +++I Y+++G+++ +LF + K V WN
Sbjct: 151 LKNFKGID--FLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWN 208
Query: 167 AMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKS 226
M+ GY + G + +K F M PNA++ VL C++ + LG Q+H LV S
Sbjct: 209 VMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVS 268
Query: 227 PLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLF 286
+ + + SL+SMY+KCG +A +LF + R D V+WN MISGY Q G E++L F
Sbjct: 269 GVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFF 328
Query: 287 DEMRHDGMKPDWITFVAVL 305
EM G+ PD ITF ++L
Sbjct: 329 YEMISSGVLPDAITFSSLL 347
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 104/222 (46%), Gaps = 3/222 (1%)
Query: 141 YMKFGRVESAERLFREMSLK--TLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNAL 198
Y G ++F + L+ ++ WN++I+ +V NG L + ML G P+
Sbjct: 80 YAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVS 139
Query: 199 SLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQI 258
+ ++ C L + + V + + +SLI Y + G + +LF ++
Sbjct: 140 TFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRV 199
Query: 259 PRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGV 318
+KD V WN M++GYA+ GA + + F MR D + P+ +TF VL C L+DLGV
Sbjct: 200 LQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGV 259
Query: 319 QYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSM 360
Q ++V G+ + ++ + + GR +A L + M
Sbjct: 260 QLHGLVVVS-GVDFEGSIKNSLLSMYSKCGRFDDASKLFRMM 300
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
Query: 195 PNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWEL 254
P LSL +L CSN + L+ GKQVH + + +S D+ ++ MYA CG + ++
Sbjct: 35 PRRLSL--LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKM 92
Query: 255 F--VQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLAC 308
F + + R I WN++IS + ++G +AL + +M G+ PD TF ++ AC
Sbjct: 93 FYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKAC 148
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 315 bits (808), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 156/389 (40%), Positives = 236/389 (60%), Gaps = 7/389 (1%)
Query: 56 SARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGD 115
SAR F M ++ SW ++ Y + G + EA +F +MPE+N SW+A+V G V GD
Sbjct: 163 SARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGD 222
Query: 116 LDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVEN 175
L A + F P R +I++T+MI GY K G + SA LF E + W+A+I GY +N
Sbjct: 223 LVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQN 282
Query: 176 GRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQV----HQLVCKSPLSSD 231
G+ + K+F M KP+ + ++ CS + +L ++V HQ + K SS
Sbjct: 283 GQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNK--FSSH 340
Query: 232 TTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRH 291
+LI M AKCG + A +LF ++P++D+VS+ +M+ G A HG G +A+ LF++M
Sbjct: 341 YVV-PALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVD 399
Query: 292 DGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLP 351
+G+ PD + F +L C + LV+ G++YF +M + + I P+HY+C+V+LL R G+L
Sbjct: 400 EGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLK 459
Query: 352 EAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYA 411
EA +LIKSMPF+ H + +G+LLG C +H N ++AE A++L EL+P SA YV L+N+YA
Sbjct: 460 EAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYA 519
Query: 412 AQNRWEHVARIRRSMKENKVVKAPGYSWI 440
A +RW VA +R M EN + K G SWI
Sbjct: 520 ALDRWTDVAHLRDKMNENGITKICGRSWI 548
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 313 bits (803), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 174/495 (35%), Positives = 269/495 (54%), Gaps = 41/495 (8%)
Query: 2 KVKSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFF 61
K +T+ N ++ + K G A ++F+++ N S+N M++ ++ + AR F
Sbjct: 78 KRPNTLLSNHLIGMYMK-CGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVF 136
Query: 62 DRMEVKDTASWNTMISGYAQVGLMGEA--------------------SMLFAVMPEK--- 98
D M +D SWNTM+ GYAQ G + EA +L A + +
Sbjct: 137 DSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQ 196
Query: 99 ----------------NCVSWSAMVSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYM 142
N V +++ Y CG +++A CF V+ + WT +I+GY
Sbjct: 197 LNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYA 256
Query: 143 KFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTS 202
K G +E+AE+LF EM K V+W A+IAGYV G L LF+ M+ G KP + +S
Sbjct: 257 KLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSS 316
Query: 203 VLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELF-VQIPRK 261
L +++++L+ GK++H + ++ + + +SLI MY+K G L+ + +F + +
Sbjct: 317 CLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKH 376
Query: 262 DIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYF 321
D V WN MIS AQHG G KAL + D+M ++P+ T V +L AC+H+GLV+ G+++F
Sbjct: 377 DCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWF 436
Query: 322 NMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKN 381
M GI EHYAC++DLLGRAG E + I+ MPF+P I+ +LG CRIH N
Sbjct: 437 ESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGN 496
Query: 382 LDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIE 441
+L + AA L++LDP S+ Y+ L+++YA +WE V ++R MK+ +V K SWIE
Sbjct: 497 EELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIE 556
Query: 442 ISSEVHEFRSSDRLH 456
I +V F SD H
Sbjct: 557 IEKKVEAFTVSDGSH 571
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 312 bits (800), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 164/451 (36%), Positives = 263/451 (58%), Gaps = 9/451 (1%)
Query: 16 FAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRM-----EVKDTA 70
F K + + A +LF ++ PN YN ++ + H+ + ++ E+ D
Sbjct: 51 FCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRF 110
Query: 71 SWNTMISGYAQVG--LMGEA--SMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYAA 126
++ M A +G +G+ L P + V+ +A++ Y+ DL A + F
Sbjct: 111 TFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEM 170
Query: 127 PVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFK 186
R VI+W ++++GY + G+++ A+ LF M KT+V+W AMI+GY G + + F+
Sbjct: 171 YERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFR 230
Query: 187 SMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCG 246
M +G +P+ +SL SVL C+ L +L+LGK +H + T +LI MY+KCG
Sbjct: 231 EMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCG 290
Query: 247 DLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLL 306
+ +A +LF Q+ KD++SW+ MISGYA HG A+ F+EM+ +KP+ ITF+ +L
Sbjct: 291 VISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLS 350
Query: 307 ACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHP 366
AC+H G+ G++YF+MM +D+ I+ K EHY C++D+L RAG+L AV++ K+MP KP
Sbjct: 351 ACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDS 410
Query: 367 AIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSM 426
I+G+LL +CR NLD+A A +L+EL+P YV LAN+YA +WE V+R+R+ +
Sbjct: 411 KIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMI 470
Query: 427 KENKVVKAPGYSWIEISSEVHEFRSSDRLHP 457
+ + K PG S IE+++ V EF S D P
Sbjct: 471 RNENMKKTPGGSLIEVNNIVQEFVSGDNSKP 501
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 151/351 (43%), Gaps = 58/351 (16%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVG---SA 57
M + ++WNS+LS +A+ G ++A+ LF + + VS+ M++ + G+G A
Sbjct: 170 MYERDVISWNSLLSGYARL-GQMKKAKGLFHLMLDKTIVSWTAMISGYT---GIGCYVEA 225
Query: 58 RAFFDRMEV----KDTASWNTMISGYAQVGL--MGEASMLFAVMPE--KNCVSWSAMVSG 109
FF M++ D S +++ AQ+G +G+ L+A K +A++
Sbjct: 226 MDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEM 285
Query: 110 YVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMI 169
Y CG + A++ F + VI+W+ MI+G
Sbjct: 286 YSKCGVISQAIQLFGQMEGKDVISWSTMISG----------------------------- 316
Query: 170 AGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKS-PL 228
Y +G A ++ F M + KPN ++ +L CS++ Q G + ++ + +
Sbjct: 317 --YAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQI 374
Query: 229 SSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK-DIVSWNAMISGYAQHGAGEKALHLFD 287
LI + A+ G L+ A E+ +P K D W +++S G + AL D
Sbjct: 375 EPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMD 434
Query: 288 EMRHDGMKPDWITFVAVLLACNHAGLVDLG----VQYFNMMVRDFGIKTKP 334
+ ++P+ + VLLA +A DLG V M+R+ +K P
Sbjct: 435 HLVE--LEPEDMGNY-VLLANIYA---DLGKWEDVSRLRKMIRNENMKKTP 479
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 311 bits (798), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 160/440 (36%), Positives = 251/440 (57%), Gaps = 12/440 (2%)
Query: 45 LACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWS 104
L H+ FG G F +++ T+I Y+ G + EA +F MPE++ ++W+
Sbjct: 891 LQAHIWKFGFG----FHVKIQT-------TLIDFYSATGRIREARKVFDEMPERDDIAWT 939
Query: 105 AMVSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVT 164
MVS Y D+D+A ++ T +I GYM G +E AE LF +M +K +++
Sbjct: 940 TMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIIS 999
Query: 165 WNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVC 224
W MI GY +N R + + +F M+E G P+ +++++V+ C++L L++GK+VH
Sbjct: 1000 WTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTL 1059
Query: 225 KSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALH 284
++ D G++L+ MY+KCG L+ A +F +P+K++ WN++I G A HG ++AL
Sbjct: 1060 QNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALK 1119
Query: 285 LFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLL 344
+F +M + +KP+ +TFV+V AC HAGLVD G + + M+ D+ I + EHY MV L
Sbjct: 1120 MFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLF 1179
Query: 345 GRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYV 404
+AG + EA++LI +M F+P+ I+G LL CRIHKNL +AE A L+ L+P ++ Y
Sbjct: 1180 SKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYF 1239
Query: 405 QLANVYAAQNRWEHVARIRRSMKENKVVK-APGYSWIEISSEVHEFRSSDRLHPELASIH 463
L ++YA QNRW VA IR M+E + K PG S I I H F ++D+ H +
Sbjct: 1240 LLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVC 1299
Query: 464 XXXXXXXXXXXXAGYVPDLE 483
AGYV + E
Sbjct: 1300 LLLDEIYDQMGLAGYVQETE 1319
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 141/311 (45%), Gaps = 41/311 (13%)
Query: 7 VTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEV 66
V + L F G +AR++F+++PE + +++ M++ + + SA + ++M
Sbjct: 904 VKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSE 963
Query: 67 KDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYA- 125
K+ A+ N +I+GY +G + +A LF MP K+ +SW+ M+ GY A+ FY
Sbjct: 964 KNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKM 1023
Query: 126 --------------------------------------APVRSVITWTAMITGYMKFGRV 147
V V +A++ Y K G +
Sbjct: 1024 MEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSL 1083
Query: 148 ESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGC 207
E A +F + K L WN++I G +G A++ LK+F M KPNA++ SV C
Sbjct: 1084 ERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTAC 1143
Query: 208 SNLSALQLGKQVHQ-LVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIP-RKDIVS 265
++ + G+++++ ++ + S+ ++ +++K G + EA EL + + V
Sbjct: 1144 THAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVI 1203
Query: 266 WNAMISGYAQH 276
W A++ G H
Sbjct: 1204 WGALLDGCRIH 1214
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 113/288 (39%), Gaps = 65/288 (22%)
Query: 138 ITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNA 197
IT F R++ A +M + +NA+ G+V L+L+ ML P++
Sbjct: 812 ITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSS 871
Query: 198 LSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQ 257
+ +S++ S S + G+ + + K T+LI Y+ G ++EA ++F +
Sbjct: 872 YTYSSLVKASSFAS--RFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDE 929
Query: 258 IPRKDIVSW-------------------------------NAMISGYAQHGAGEKALHLF 286
+P +D ++W N +I+GY G E+A LF
Sbjct: 930 MPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLF 989
Query: 287 DE-------------------------------MRHDGMKPDWITFVAVLLACNHAGLVD 315
++ M +G+ PD +T V+ AC H G+++
Sbjct: 990 NQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLE 1049
Query: 316 LGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFK 363
+G + +M G + +VD+ + G L A+ + ++P K
Sbjct: 1050 IGKE-VHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKK 1096
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 308 bits (790), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 184/574 (32%), Positives = 290/574 (50%), Gaps = 14/574 (2%)
Query: 10 NSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDT 69
N+ L F K + ++ L+E + + V++ M+ ++ V SA F + K+T
Sbjct: 323 NNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNT 382
Query: 70 ASWNTMISGYAQVGLMGEASMLFAVMPEKNC-VSWSAMVSGYVACGDLDAAVE------- 121
++N +++G+ + G +A LF M ++ ++ ++ S ACG +
Sbjct: 383 ITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGF 442
Query: 122 CFYAAPVRSVITWTAMITGYMKFGRVESAERLFRE--MSLKTLVTWNAMIAGYVENGRAE 179
C + TA++ + R+ AE +F + +L + ++I GY NG +
Sbjct: 443 CIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPD 502
Query: 180 DGLKLF-KSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSL 238
+ LF +++ E + +SLT +L C L ++G Q+H K+ SD + G SL
Sbjct: 503 KAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSL 562
Query: 239 ISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDW 298
ISMYAKC D +A ++F + D++SWN++IS Y G++AL L+ M +KPD
Sbjct: 563 ISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDI 622
Query: 299 ITFVAVLLACNHAGLVDLGV--QYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDL 356
IT V+ A + L F M + I+ EHY V +LG G L EA D
Sbjct: 623 ITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDT 682
Query: 357 IKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRW 416
I SMP +P ++ LL +CRIH N +A+ AK +L P + + Y+ +N+Y+A W
Sbjct: 683 INSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFW 742
Query: 417 EHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIHXXXXXXXXXXXXA 476
IR M+E K P SWI +++H F + D HP+ I+
Sbjct: 743 HRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDIYRGLEILIMECLKV 802
Query: 477 GYVPDLEFALHDVGEELKEQLLLWHSEKLAIAYGLLKVPL-GLPIRVFKNLRVCGDCHTA 535
GY P+ E+ L +V E +K+ L HS KLA+ YG+L G P+RV KN+ +CGDCH
Sbjct: 803 GYEPNTEYVLQEVDEFMKKSFLFHHSAKLAVTYGILSSNTRGKPVRVMKNVMLCGDCHEF 862
Query: 536 IKYISAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
KYIS + REI++RD++ FHHF +G CSC D W
Sbjct: 863 FKYISVVVKREIVLRDSSGFHHFVNGKCSCRDLW 896
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 103/199 (51%), Gaps = 10/199 (5%)
Query: 135 TAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESG-A 193
A+I+ Y+K G A +F +S T+V++ A+I+G+ + LK+F M ++G
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV 177
Query: 194 KPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAK-----CGDL 248
+PN + ++L C +S LG Q+H L+ KS + SL+S+Y K C D+
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDV 237
Query: 249 KEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEM-RHDGMKPDWITFVAVLLA 307
+LF +IP++D+ SWN ++S + G KA LF EM R +G D T +L +
Sbjct: 238 ---LKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSS 294
Query: 308 CNHAGLVDLGVQYFNMMVR 326
C + ++ G + +R
Sbjct: 295 CTDSSVLLRGRELHGRAIR 313
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/396 (19%), Positives = 163/396 (41%), Gaps = 76/396 (19%)
Query: 41 YNIMLACHLHHFGVGSA-RAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKN 99
Y + L+ H V A A F ++ + T N +IS Y ++G EA ++F +
Sbjct: 85 YLLRLSAQYHDVEVTKAVHASFLKLREEKTRLGNALISTYLKLGFPREAILVFVSLSSPT 144
Query: 100 CVSWSAMVSGYVACGDLDAAVECFYAAPVRSVI-----TWTAMITGYMKFGRV------- 147
VS++A++SG+ A++ F+ ++ T+ A++T ++ R
Sbjct: 145 VVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIH 204
Query: 148 ------------------------------ESAERLFREMSLKTLVTWNAMIAGYVENGR 177
+ +LF E+ + + +WN +++ V+ G+
Sbjct: 205 GLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGK 264
Query: 178 AEDGLKLFKSMLE-SGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGT 236
+ LF M G ++ +L+++L C++ S L G+++H + L + +
Sbjct: 265 SHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNN 324
Query: 237 SLISMYAKCGDLKE-------------------------------AWELFVQIPRKDIVS 265
+LI Y+K D+K+ A E+F + K+ ++
Sbjct: 325 ALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTIT 384
Query: 266 WNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMV 325
+NA+++G+ ++G G KAL LF +M G++ + + + AC + Q +
Sbjct: 385 YNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCI 444
Query: 326 RDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMP 361
+ FG P ++D+ R R+ +A ++ P
Sbjct: 445 K-FGTAFNPCIQTALLDMCTRCERMADAEEMFDQWP 479
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 308 bits (789), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 169/441 (38%), Positives = 259/441 (58%), Gaps = 38/441 (8%)
Query: 57 ARAF--FDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVM----PEKNCVSWSAMVSGY 110
A AF FD M +D SWN +I+ + Q G E LF M E + ++ +++
Sbjct: 434 AEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILK-- 491
Query: 111 VAC--GDLDAAVECFYAAPVRSVITWTA-----MITGYMKFGRVESAERL---------- 153
AC G L +E +++ V+S + + +I Y K G +E AE++
Sbjct: 492 -ACTGGSLGYGME-IHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANV 549
Query: 154 ------FREMSLKTL----VTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSV 203
+M K L V+WN++I+GYV ++ED LF M+E G P+ + +V
Sbjct: 550 SGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATV 609
Query: 204 LLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDI 263
L C+NL++ LGKQ+H V K L SD ++L+ MY+KCGDL ++ +F + R+D
Sbjct: 610 LDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDF 669
Query: 264 VSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNM 323
V+WNAMI GYA HG GE+A+ LF+ M + +KP+ +TF+++L AC H GL+D G++YF M
Sbjct: 670 VTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYM 729
Query: 324 MVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHK-NL 382
M RD+G+ + HY+ MVD+LG++G++ A++LI+ MPF+ I+ TLLG C IH+ N+
Sbjct: 730 MKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNV 789
Query: 383 DLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEI 442
++AE A LL LDP ++ Y L+NVYA WE V+ +RR+M+ K+ K PG SW+E+
Sbjct: 790 EVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVEL 849
Query: 443 SSEVHEFRSSDRLHPELASIH 463
E+H F D+ HP I+
Sbjct: 850 KDELHVFLVGDKAHPRWEEIY 870
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 119/407 (29%), Positives = 187/407 (45%), Gaps = 53/407 (13%)
Query: 2 KVKSTVTWN-SILSAFAKKHGNFEQARQLFEKIP----EPNTVSYNIMLACHLHHFGVGS 56
+V S T N S + K G E +Q + P T N +L + + S
Sbjct: 42 QVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVS 101
Query: 57 ARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDL 116
A FD+M ++D SWN MI+GY++ M +A+ F +MP ++ VSW++M+SGY+ G+
Sbjct: 102 ASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGES 161
Query: 117 DAAVECF----------------------------------YAAPVR-----SVITWTAM 137
++E F + VR V+ +A+
Sbjct: 162 LKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASAL 221
Query: 138 ITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNA 197
+ Y K R + R+F+ + K V+W+A+IAG V+N LK FK M + A +
Sbjct: 222 LDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQ 281
Query: 198 LSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQ 257
SVL C+ LS L+LG Q+H KS ++D T+ + MYAKC ++++A LF
Sbjct: 282 SIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDN 341
Query: 258 IPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLG 317
+ S+NAMI+GY+Q G KAL LF + G+ D I+ V AC + G
Sbjct: 342 SENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEG 401
Query: 318 VQYFNMMVRDFGIKTKPEHYACM----VDLLGRAGRLPEAVDLIKSM 360
+Q + + IK+ C+ +D+ G+ L EA + M
Sbjct: 402 LQIYGL-----AIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEM 443
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 113/431 (26%), Positives = 191/431 (44%), Gaps = 81/431 (18%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHF-GVGSARA 59
M ++ V+WN +++ ++K + F +A F +P + VS+N ML+ +L + + S
Sbjct: 109 MPLRDVVSWNKMINGYSKSNDMF-KANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEV 167
Query: 60 FFDR----------------------------MEV----------KDTASWNTMISGYAQ 81
F D M++ D + + ++ YA+
Sbjct: 168 FVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAK 227
Query: 82 VGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECF--------------YAAP 127
E+ +F +PEKN VSWSA+++G V L A++ F YA+
Sbjct: 228 GKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASV 287
Query: 128 VRSV-------------------------ITWTAMITGYMKFGRVESAERLFREMSLKTL 162
+RS I TA + Y K ++ A+ LF
Sbjct: 288 LRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNR 347
Query: 163 VTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQL 222
++NAMI GY + L LF ++ SG + +SL+ V C+ + L G Q++ L
Sbjct: 348 QSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGL 407
Query: 223 VCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKA 282
KS LS D + I MY KC L EA+ +F ++ R+D VSWNA+I+ + Q+G G +
Sbjct: 408 AIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYET 467
Query: 283 LHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVD 342
L LF M ++PD TF ++L AC G + G++ + +V+ G+ + ++D
Sbjct: 468 LFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVKS-GMASNSSVGCSLID 525
Query: 343 LLGRAGRLPEA 353
+ + G + EA
Sbjct: 526 MYSKCGMIEEA 536
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 157/327 (48%), Gaps = 34/327 (10%)
Query: 57 ARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSG-YVACGD 115
A+ FD E + S+N MI+GY+Q +A +LF + +SG + AC
Sbjct: 335 AQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACAL 394
Query: 116 LDAAVECF--YAAPVRS-----VITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAM 168
+ E Y ++S V A I Y K + A R+F EM + V+WNA+
Sbjct: 395 VKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAI 454
Query: 169 IAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPL 228
IA + +NG+ + L LF SML S +P+ + S+L C+ +L G ++H + KS +
Sbjct: 455 IAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGM 513
Query: 229 SSDTTAGTSLISMYAKCGDLKEAWELFVQ-IPRKDI-------------------VSWNA 268
+S+++ G SLI MY+KCG ++EA ++ + R ++ VSWN+
Sbjct: 514 ASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNS 573
Query: 269 MISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDF 328
+ISGY E A LF M G+ PD T+ VL C + LG Q +++
Sbjct: 574 IISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKK- 632
Query: 329 GIKTKPEHYAC--MVDLLGRAGRLPEA 353
+ + + Y C +VD+ + G L ++
Sbjct: 633 --ELQSDVYICSTLVDMYSKCGDLHDS 657
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 123/261 (47%), Gaps = 9/261 (3%)
Query: 128 VRSVITWTAMITGYMKFGRVESAE---RLFREMSLKTLVTWNAMIAGYVENGRAEDGLKL 184
RSV+++ +T + + RV S +++ + ++ + + G E G +
Sbjct: 11 TRSVVSFNRCLTEKISYRRVPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQA 70
Query: 185 FKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAK 244
M+ SG +P L +L +N V K PL D + +I+ Y+K
Sbjct: 71 HAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFD---KMPLR-DVVSWNKMINGYSK 126
Query: 245 CGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAV 304
D+ +A F +P +D+VSWN+M+SGY Q+G K++ +F +M +G++ D TF +
Sbjct: 127 SNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAII 186
Query: 305 LLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKP 364
L C+ LG+Q ++VR G T + ++D+ + R E++ + + +P K
Sbjct: 187 LKVCSFLEDTSLGMQIHGIVVR-VGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEK- 244
Query: 365 HPAIFGTLLGACRIHKNLDLA 385
+ + ++ C + L LA
Sbjct: 245 NSVSWSAIIAGCVQNNLLSLA 265
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 98/199 (49%), Gaps = 18/199 (9%)
Query: 7 VTWNSILSAFAKKHGNFEQARQLFEKIPE----PNTVSYNIML--ACHLHHFGVGSA-RA 59
V+WNSI+S + K + E A+ LF ++ E P+ +Y +L +L G+G A
Sbjct: 569 VSWNSIISGYVMKEQS-EDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHA 627
Query: 60 FFDRMEVK-DTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDA 118
+ E++ D +T++ Y++ G + ++ ++F ++ V+W+AM+ GY G +
Sbjct: 628 QVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEE 687
Query: 119 AVECFYAAPVRSV----ITWTAMITGYMKFGRVESAERLF----REMSLK-TLVTWNAMI 169
A++ F + ++ +T+ +++ G ++ F R+ L L ++ M+
Sbjct: 688 AIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMV 747
Query: 170 AGYVENGRAEDGLKLFKSM 188
++G+ + L+L + M
Sbjct: 748 DILGKSGKVKRALELIREM 766
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 307 bits (786), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 168/447 (37%), Positives = 242/447 (54%), Gaps = 39/447 (8%)
Query: 56 SARAFFDRMEVKDTASWNTMISGYAQVG--------------------------LMGEAS 89
+AR FD V+D SWN +I+GY ++G L+ S
Sbjct: 209 NARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCS 268
Query: 90 MLFAVMPEKNCVSW-------------SAMVSGYVACGDLDAAVECFYAAPVRSVITWTA 136
ML + K + +A++ + CGD+ A F R++++WT
Sbjct: 269 MLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTT 328
Query: 137 MITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPN 196
MI+GY + G ++ + +LF +M K +V WNAMI G V+ R +D L LF+ M S KP+
Sbjct: 329 MISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPD 388
Query: 197 ALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFV 256
+++ L CS L AL +G +H+ + K LS + GTSL+ MYAKCG++ EA +F
Sbjct: 389 EITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFH 448
Query: 257 QIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDL 316
I ++ +++ A+I G A HG A+ F+EM G+ PD ITF+ +L AC H G++
Sbjct: 449 GIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQT 508
Query: 317 GVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGAC 376
G YF+ M F + + +HY+ MVDLLGRAG L EA L++SMP + A++G LL C
Sbjct: 509 GRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGC 568
Query: 377 RIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPG 436
R+H N++L E AAK LLELDPS + YV L +Y N WE R RR M E V K PG
Sbjct: 569 RMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPG 628
Query: 437 YSWIEISSEVHEFRSSDRLHPELASIH 463
S IE++ V EF D+ PE I+
Sbjct: 629 CSSIEVNGIVCEFIVRDKSRPESEKIY 655
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 135/303 (44%), Gaps = 66/303 (21%)
Query: 104 SAMVSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLV 163
+A + + +CGD++ A + F +PVR +++W +I GY K G E A
Sbjct: 195 NASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKA------------- 241
Query: 164 TWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLV 223
+ ++K M G KP+ +++ ++ CS L L GK+ ++ V
Sbjct: 242 ------------------IYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYV 283
Query: 224 CKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHG------ 277
++ L +L+ M++KCGD+ EA +F + ++ IVSW MISGYA+ G
Sbjct: 284 KENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSR 343
Query: 278 -------------------------AGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAG 312
G+ AL LF EM+ KPD IT + L AC+ G
Sbjct: 344 KLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLG 403
Query: 313 LVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDL---IKSMPFKPHPAIF 369
+D+G+ + + + + + +VD+ + G + EA+ + I++ + AI
Sbjct: 404 ALDVGI-WIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAII 462
Query: 370 GTL 372
G L
Sbjct: 463 GGL 465
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 112/205 (54%), Gaps = 4/205 (1%)
Query: 152 RLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESG---AKPNALSLTSVLLGCS 208
++ + + + +WN I G+ E+ ++ L+K ML G ++P+ + + C+
Sbjct: 108 KILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCA 167
Query: 209 NLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNA 268
+L LG + V K L + + I M+A CGD++ A ++F + P +D+VSWN
Sbjct: 168 DLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNC 227
Query: 269 MISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDF 328
+I+GY + G EKA++++ M +G+KPD +T + ++ +C+ G ++ G +++ V++
Sbjct: 228 LINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYE-YVKEN 286
Query: 329 GIKTKPEHYACMVDLLGRAGRLPEA 353
G++ ++D+ + G + EA
Sbjct: 287 GLRMTIPLVNALMDMFSKCGDIHEA 311
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 132/287 (45%), Gaps = 16/287 (5%)
Query: 10 NSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDT 69
N+++ F+K G+ +AR++F+ + + VS+ M++ + + +R FD ME KD
Sbjct: 296 NALMDMFSKC-GDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDV 354
Query: 70 ASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWS-AMVSGYVAC---GDLDAAVECF-- 123
WN MI G Q +A LF M N M+ AC G LD +
Sbjct: 355 VLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRY 414
Query: 124 ---YAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAED 180
Y+ + +V T+++ Y K G + A +F + + +T+ A+I G +G A
Sbjct: 415 IEKYSLSL-NVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDAST 473
Query: 181 GLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQ-VHQLVCKSPLSSDTTAGTSLI 239
+ F M+++G P+ ++ +L C + +Q G+ Q+ + L+ + ++
Sbjct: 474 AISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMV 533
Query: 240 SMYAKCGDLKEAWELFVQIPRK-DIVSWNAMISGYAQHGA---GEKA 282
+ + G L+EA L +P + D W A++ G HG GEKA
Sbjct: 534 DLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKA 580
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 303 bits (777), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 172/511 (33%), Positives = 271/511 (53%), Gaps = 49/511 (9%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIP----EPNTVSYNIMLACHLHHFGVGS 56
M + +WN+++S F + G E+A +LF ++ EPN+VS + ++ +
Sbjct: 168 MPERDVASWNTVISCFYQS-GEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLER 226
Query: 57 ARAFFDRMEVK----DTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVA 112
+ + K D + ++ Y + + A +F MP K+ V+W++M+ GYVA
Sbjct: 227 GKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVA 286
Query: 113 CGDLDAAVECF----------------------------------YAAPVRSVITW---- 134
GD + VE + +RSV+
Sbjct: 287 KGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYV 346
Query: 135 -TAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGA 193
++I Y K G AE +F + +WN MI+ Y+ G ++++ M+ G
Sbjct: 347 NCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGV 406
Query: 194 KPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWE 253
KP+ ++ TSVL CS L+AL+ GKQ+H + +S L +D ++L+ MY+KCG+ KEA+
Sbjct: 407 KPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFR 466
Query: 254 LFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGL 313
+F IP+KD+VSW MIS Y HG +AL+ FDEM+ G+KPD +T +AVL AC HAGL
Sbjct: 467 IFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGL 526
Query: 314 VDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPA-IFGTL 372
+D G+++F+ M +GI+ EHY+CM+D+LGRAGRL EA ++I+ P A + TL
Sbjct: 527 IDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTL 586
Query: 373 LGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVV 432
AC +H L + A+ L+E P A+ Y+ L N+YA+ W+ R+R MKE +
Sbjct: 587 FSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLR 646
Query: 433 KAPGYSWIEISSEVHEFRSSDRLHPELASIH 463
K PG SWIE+S +V F + DR H +++
Sbjct: 647 KKPGCSWIEMSDKVCHFFAEDRSHLRAENVY 677
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/314 (32%), Positives = 162/314 (51%), Gaps = 15/314 (4%)
Query: 61 FDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMP----EKNCVSWSAMVSGYVACGDL 116
FD M +D ASWNT+IS + Q G +A LF M E N VS + +S AC L
Sbjct: 165 FDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAIS---ACSRL 221
Query: 117 -------DAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMI 169
+ +C +A++ Y K +E A +F++M K+LV WN+MI
Sbjct: 222 LWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMI 281
Query: 170 AGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLS 229
GYV G ++ +++ M+ G +P+ +LTS+L+ CS L GK +H V +S ++
Sbjct: 282 KGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVN 341
Query: 230 SDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEM 289
+D SLI +Y KCG+ A +F + + SWN MIS Y G KA+ ++D+M
Sbjct: 342 ADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQM 401
Query: 290 RHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGR 349
G+KPD +TF +VL AC+ ++ G Q ++ + + ++T + ++D+ + G
Sbjct: 402 VSVGVKPDVVTFTSVLPACSQLAALEKGKQ-IHLSISESRLETDELLLSALLDMYSKCGN 460
Query: 350 LPEAVDLIKSMPFK 363
EA + S+P K
Sbjct: 461 EKEAFRIFNSIPKK 474
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 149/280 (53%), Gaps = 14/280 (5%)
Query: 42 NIMLACHLHHFGVGSARAFFDRMEVK-DTASWNTMISGYAQVGLMGEASMLFAVMPEKN- 99
N+ C H SAR F+ +++ D WN+++SGY++ + + +F + +
Sbjct: 47 NVYFTCKDH----CSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSI 102
Query: 100 CV----SWSAMVSGYVACGD--LDAAVECFYAAP--VRSVITWTAMITGYMKFGRVESAE 151
CV ++ ++ Y A G L + V V+ ++++ Y KF E++
Sbjct: 103 CVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSL 162
Query: 152 RLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLS 211
++F EM + + +WN +I+ + ++G AE L+LF M SG +PN++SLT + CS L
Sbjct: 163 QVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLL 222
Query: 212 ALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMIS 271
L+ GK++H+ K D ++L+ MY KC L+ A E+F ++PRK +V+WN+MI
Sbjct: 223 WLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIK 282
Query: 272 GYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHA 311
GY G + + + + M +G +P T ++L+AC+ +
Sbjct: 283 GYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRS 322
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 120/237 (50%), Gaps = 3/237 (1%)
Query: 129 RSVITWTAMITGYMKFGRVESAERLFREMSLKTLV-TWNAMIAGYVENGRAEDGLKLFKS 187
R V+ ++I Y SA +F +++ V WN++++GY +N D L++FK
Sbjct: 37 RDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKR 96
Query: 188 MLE-SGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCG 246
+L S P++ + +V+ L LG+ +H LV KS D +SL+ MYAK
Sbjct: 97 LLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFN 156
Query: 247 DLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLL 306
+ + ++F ++P +D+ SWN +IS + Q G EKAL LF M G +P+ ++ +
Sbjct: 157 LFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAIS 216
Query: 307 ACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFK 363
AC+ ++ G + V+ G + + +VD+ G+ L A ++ + MP K
Sbjct: 217 ACSRLLWLERGKEIHRKCVKK-GFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRK 272
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 68/145 (46%), Gaps = 11/145 (7%)
Query: 200 LTSVLLGCSNLS-ALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQI 258
L S+L C+N + +L+ K VHQ + L D SLI++Y C D A +F
Sbjct: 6 LLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENF 65
Query: 259 P-RKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGM-KPDWITFVAVLLACNHAGLVDL 316
R D+ WN+++SGY+++ L +F + + + PD TF V+ A L
Sbjct: 66 DIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGA-----L 120
Query: 317 GVQYFNMMVRDFGIKTKPEHYACMV 341
G ++ M+ +K+ Y C V
Sbjct: 121 GREFLGRMIHTLVVKSG---YVCDV 142
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 303 bits (776), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 176/513 (34%), Positives = 279/513 (54%), Gaps = 60/513 (11%)
Query: 4 KSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLA------CHLHHFGVG-- 55
+ VTWN+I+ ++ + N +A LF+++ VS LA H+H G
Sbjct: 492 RDNVTWNTIIGSYVQDE-NESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQ 550
Query: 56 ----SARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYV 111
S + DR D + +++I Y++ G++ +A +F+ +PE + VS +A+++GY
Sbjct: 551 VHCLSVKCGLDR----DLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGY- 605
Query: 112 ACGDLDAAVECFYAAPVRSV----ITWTAMITG--------------------------- 140
+ +L+ AV F R V IT+ ++
Sbjct: 606 SQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGE 665
Query: 141 ---------YMKFGRVESAERLFREMSL-KTLVTWNAMIAGYVENGRAEDGLKLFKSMLE 190
YM + A LF E+S K++V W M++G+ +NG E+ LK +K M
Sbjct: 666 YLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRH 725
Query: 191 SGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKE 250
G P+ + +VL CS LS+L+ G+ +H L+ D +LI MYAKCGD+K
Sbjct: 726 DGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKG 785
Query: 251 AWELFVQIPRK-DIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACN 309
+ ++F ++ R+ ++VSWN++I+GYA++G E AL +FD MR + PD ITF+ VL AC+
Sbjct: 786 SSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACS 845
Query: 310 HAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIF 369
HAG V G + F MM+ +GI+ + +H ACMVDLLGR G L EA D I++ KP ++
Sbjct: 846 HAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLW 905
Query: 370 GTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKEN 429
+LLGACRIH + E +A+ L+EL+P +++ YV L+N+YA+Q WE +R+ M++
Sbjct: 906 SSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDR 965
Query: 430 KVVKAPGYSWIEISSEVHEFRSSDRLHPELASI 462
V K PGYSWI++ H F + D+ H E+ I
Sbjct: 966 GVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKI 998
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 179/369 (48%), Gaps = 14/369 (3%)
Query: 5 STVTWNSILSAFAKKHGNFEQARQLFEKIPE----PNTVSYNIMLACHLHHFGVGSARAF 60
+TV W + S + K G E+A +FE++ + P+ +++ ++ ++ + AR
Sbjct: 225 NTVCWTCLFSGYVKA-GLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLL 283
Query: 61 FDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVS------GYVACG 114
F M D +WN MISG+ + G A F M + + S + + G VA
Sbjct: 284 FGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANL 343
Query: 115 DLDAAV--ECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGY 172
DL V E ++ +++++ Y K ++E+A ++F + K V WNAMI GY
Sbjct: 344 DLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGY 403
Query: 173 VENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDT 232
NG + ++LF M SG + + TS+L C+ L++G Q H ++ K L+ +
Sbjct: 404 AHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNL 463
Query: 233 TAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHD 292
G +L+ MYAKCG L++A ++F ++ +D V+WN +I Y Q +A LF M
Sbjct: 464 FVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLC 523
Query: 293 GMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPE 352
G+ D + L AC H + G Q + V+ G+ + ++D+ + G + +
Sbjct: 524 GIVSDGACLASTLKACTHVHGLYQGKQVHCLSVK-CGLDRDLHTGSSLIDMYSKCGIIKD 582
Query: 353 AVDLIKSMP 361
A + S+P
Sbjct: 583 ARKVFSSLP 591
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 111/384 (28%), Positives = 190/384 (49%), Gaps = 15/384 (3%)
Query: 4 KSTVTWNSILSAFAK--KHGNFEQA-RQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAF 60
K WNS+LS ++ K G ++ LFE PN +++I+L+ V R
Sbjct: 123 KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQI 182
Query: 61 FDRMEVKDTASWNTMISG-----YAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGD 115
M +K N+ G YA+ + +A +F + + N V W+ + SGYV G
Sbjct: 183 HCSM-IKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGL 241
Query: 116 LDAAVECFYAAPVR----SVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAG 171
+ AV F + + +I Y++ G+++ A LF EMS +V WN MI+G
Sbjct: 242 PEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISG 301
Query: 172 YVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSD 231
+ + G ++ F +M +S K +L SVL ++ L LG VH K L+S+
Sbjct: 302 HGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASN 361
Query: 232 TTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRH 291
G+SL+SMY+KC ++ A ++F + K+ V WNAMI GYA +G K + LF +M+
Sbjct: 362 IYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKS 421
Query: 292 DGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLP 351
G D TF ++L C + +++G Q+ +++++ K A +VD+ + G L
Sbjct: 422 SGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNA-LVDMYAKCGALE 480
Query: 352 EAVDLIKSMPFKPHPAIFGTLLGA 375
+A + + M + + + T++G+
Sbjct: 481 DARQIFERMCDRDN-VTWNTIIGS 503
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 156/299 (52%), Gaps = 14/299 (4%)
Query: 56 SARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSGYV 111
+A F+ +E K+ WN MI GYA G + LF M + ++++++S
Sbjct: 380 AAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCA 439
Query: 112 ACGDLDAAVECFYAAPVR-----SVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWN 166
A DL+ + F++ ++ ++ A++ Y K G +E A ++F M + VTWN
Sbjct: 440 ASHDLEMGSQ-FHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWN 498
Query: 167 AMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKS 226
+I YV++ + LFK M G + L S L C+++ L GKQVH L K
Sbjct: 499 TIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKC 558
Query: 227 PLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLF 286
L D G+SLI MY+KCG +K+A ++F +P +VS NA+I+GY+Q+ E+A+ LF
Sbjct: 559 GLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLF 617
Query: 287 DEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLG 345
EM G+ P ITF ++ AC+ + LG Q+ + + G ++ E+ + LLG
Sbjct: 618 QEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKR-GFSSEGEYLG--ISLLG 673
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 130/333 (39%), Gaps = 84/333 (25%)
Query: 25 QARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGL 84
++R++F+++P+ ++ I A H +G + N ++ YA+
Sbjct: 60 KSRKVFDEMPQRLALALRIGKAVHSKSLILGID---------SEGRLGNAIVDLYAKCAQ 110
Query: 85 MGEASMLFAVMPEKNCVSWSAMVSGYVACGD----LDAAVECFYAAPVRSVITWT----- 135
+ A F + EK+ +W++M+S Y + G L + V F + T++
Sbjct: 111 VSYAEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLST 169
Query: 136 ------------------------------AMITGYMKFGRVESAERLFREMSLKTLVTW 165
A++ Y K R+ A R+F + V W
Sbjct: 170 CARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCW 229
Query: 166 NAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCK 225
+ +GYV+ G E+ + +F+ M + G +P+ L+ +V
Sbjct: 230 TCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTV---------------------- 267
Query: 226 SPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHL 285
I+ Y + G LK+A LF ++ D+V+WN MISG+ + G A+
Sbjct: 268 -------------INTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEY 314
Query: 286 FDEMRHDGMKPDWITFVAVLLACNHAGLVDLGV 318
F MR +K T +VL A +DLG+
Sbjct: 315 FFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGL 347
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 13/171 (7%)
Query: 183 KLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMY 242
KLFKS P L+L AL++GK VH + S+ G +++ +Y
Sbjct: 57 KLFKSRKVFDEMPQRLAL-----------ALRIGKAVHSKSLILGIDSEGRLGNAIVDLY 105
Query: 243 AKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFV 302
AKC + A + F KD+ +WN+M+S Y+ G K L F + + + P+ TF
Sbjct: 106 AKCAQVSYAEKQF-DFLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFS 164
Query: 303 AVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEA 353
VL C V+ G Q M++ G++ +VD+ + R+ +A
Sbjct: 165 IVLSTCARETNVEFGRQIHCSMIK-MGLERNSYCGGALVDMYAKCDRISDA 214
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 301 bits (772), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 185/588 (31%), Positives = 304/588 (51%), Gaps = 38/588 (6%)
Query: 8 TWNSILSAFAKKHGNFEQARQLFEK------IPEPNTVSYNIMLACHLHHFGVGS-ARAF 60
TW +++S +G QA +F K +P T+ + L GS +
Sbjct: 319 TWTAMISGLIH-NGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSI 377
Query: 61 FDRME-VKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAA 119
+M + D N+++ Y++ G + +A +F + K+ +W++M++GY G A
Sbjct: 378 AVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKA 437
Query: 120 VECF---YAAPVR-SVITWTAMITGYMKFGRVESAERLFREMS-----LKTLVTWNAMIA 170
E F A +R ++ITW MI+GY+K G A LF+ M + TWN +IA
Sbjct: 438 YELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIA 497
Query: 171 GYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSS 230
GY++NG+ ++ L+LF+ M S PN++++ S+L C+NL ++ +++H V + L +
Sbjct: 498 GYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDA 557
Query: 231 DTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMR 290
+L YAK GD++ + +F+ + KDI++WN++I GY HG+ AL LF++M+
Sbjct: 558 IHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMK 617
Query: 291 HDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRL 350
G+ P+ T +++LA G VD G + F + D+ I EH + MV L GRA RL
Sbjct: 618 TQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRL 677
Query: 351 PEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVY 410
EA+ I+ M + I+ + L CRIH ++D+A AA+NL L+P + ++ +Y
Sbjct: 678 EEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIY 737
Query: 411 AAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDR-------LHPELASIH 463
A + + ++N + K G SWIE+ + +H F + D+ L+P + +
Sbjct: 738 ALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQSKLCTDVLYPLVEKMS 797
Query: 464 XXXXXXXXXXXXAGYVPDLEFALHDVGEELKEQLLLWHSEKLAIAYGLLKVPLG--LPIR 521
Y +L + EE +E+ HSEK A+A+GL+ IR
Sbjct: 798 RLDNRSDQ------YNGELW-----IEEEGREETCGIHSEKFAMAFGLISSSGASKTTIR 846
Query: 522 VFKNLRVCGDCHTAIKYISAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
+ KNLR+C DCH KY+S G +I++ DT HHFK+G CSC DYW
Sbjct: 847 ILKNLRMCRDCHDTAKYVSKRYGCDILLEDTRCLHHFKNGDCSCKDYW 894
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 180/428 (42%), Gaps = 81/428 (18%)
Query: 30 FEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEAS 89
F EP+ +L+ + + AR FD M ++ +W+ MI Y++ E +
Sbjct: 107 FGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVA 166
Query: 90 MLF------AVMPEK-----------NCVSWSA----------------------MVSGY 110
LF V+P+ NC A +++ Y
Sbjct: 167 KLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVY 226
Query: 111 VACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLK----TLVTWN 166
CG+LD A + F R VI W +++ Y + G+ E A L +EM + LVTWN
Sbjct: 227 AKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWN 286
Query: 167 -----------------------------------AMIAGYVENGRAEDGLKLFKSMLES 191
AMI+G + NG L +F+ M +
Sbjct: 287 ILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLA 346
Query: 192 GAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEA 251
G PNA+++ S + CS L + G +VH + K D G SL+ MY+KCG L++A
Sbjct: 347 GVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDA 406
Query: 252 WELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHA 311
++F + KD+ +WN+MI+GY Q G KA LF M+ ++P+ IT+ ++
Sbjct: 407 RKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKN 466
Query: 312 GLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFK---PHPAI 368
G + F M +D ++ + ++ + G+ EA++L + M F P+
Sbjct: 467 GDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVT 526
Query: 369 FGTLLGAC 376
+LL AC
Sbjct: 527 ILSLLPAC 534
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 136/276 (49%), Gaps = 6/276 (2%)
Query: 104 SAMVSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLV 163
S + SG + G + A + P V T +++ Y K G + A ++F M + L
Sbjct: 90 SCIDSGSIHLGRILHARFGLFTEP--DVFVETKLLSMYAKCGCIADARKVFDSMRERNLF 147
Query: 164 TWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLV 223
TW+AMI Y R + KLF+ M++ G P+ +L GC+N ++ GK +H +V
Sbjct: 148 TWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVV 207
Query: 224 CKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKAL 283
K +SS S++++YAKCG+L A + F ++ +D+++WN+++ Y Q+G E+A+
Sbjct: 208 IKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAV 267
Query: 284 HLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDL 343
L EM +G+ P +T+ ++ N G D + M FGI + M+
Sbjct: 268 ELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKM-ETFGITADVFTWTAMISG 326
Query: 344 LGRAGRLPEAVDLIKSMPFK---PHPAIFGTLLGAC 376
L G +A+D+ + M P+ + + AC
Sbjct: 327 LIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSAC 362
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 111/249 (44%), Gaps = 13/249 (5%)
Query: 175 NGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQL--VCKSPLSSDT 232
NG + K S+ + G+K + +L C + ++ LG+ +H + P D
Sbjct: 59 NGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLFTEP---DV 115
Query: 233 TAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHD 292
T L+SMYAKCG + +A ++F + +++ +W+AMI Y++ + LF M D
Sbjct: 116 FVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKD 175
Query: 293 GMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPE 352
G+ PD F +L C + G V+ G +++++ G+ + ++ + + G L
Sbjct: 176 GVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIK-LGMSSCLRVSNSILAVYAKCGELDF 234
Query: 353 AVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLE-LDPSSAT------GYVQ 405
A + M + A LL C+ K+ + E + E + P T GY Q
Sbjct: 235 ATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQ 294
Query: 406 LANVYAAQN 414
L AA +
Sbjct: 295 LGKCDAAMD 303
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 301 bits (772), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 159/437 (36%), Positives = 257/437 (58%), Gaps = 19/437 (4%)
Query: 9 WNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKD 68
+N+++ + ++ G E AR LF++IP+ C H G F +R K+
Sbjct: 238 YNTLIVGYGQR-GQVEAARCLFDQIPD----------LCGDDHGG-----EFRERF-CKN 280
Query: 69 TASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPV 128
SWN+MI Y +VG + A +LF M +++ +SW+ M+ GYV ++ A F P
Sbjct: 281 VVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPN 340
Query: 129 RSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSM 188
R +W M++GY G VE A F + K V+WN++IA Y +N ++ + LF M
Sbjct: 341 RDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRM 400
Query: 189 LESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDL 248
G KP+ +LTS+L + L L+LG Q+HQ+V K+ + D +LI+MY++CG++
Sbjct: 401 NIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIP-DVPVHNALITMYSRCGEI 459
Query: 249 KEAWELFVQIP-RKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLA 307
E+ +F ++ ++++++WNAMI GYA HG +AL+LF M+ +G+ P ITFV+VL A
Sbjct: 460 MESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNA 519
Query: 308 CNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPA 367
C HAGLVD F M+ + I+ + EHY+ +V++ G+ EA+ +I SMPF+P
Sbjct: 520 CAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKT 579
Query: 368 IFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMK 427
++G LL ACRI+ N+ LA AA+ + L+P S+T YV L N+YA W+ +++R +M+
Sbjct: 580 VWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNME 639
Query: 428 ENKVVKAPGYSWIEISS 444
++ K G SW++ S+
Sbjct: 640 SKRIKKERGSSWVDSST 656
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 129/438 (29%), Positives = 217/438 (49%), Gaps = 70/438 (15%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGV---GSA 57
++ ++TVTWN+++S + K+ QAR+LF+ +P+ + V++N M++ ++ G+ A
Sbjct: 66 LEARNTVTWNTMISGYVKRR-EMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLEEA 124
Query: 58 RAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLD 117
R FD M +D+ SWNTMISGYA+ +GEA +LF MPE+N VSWSAM++G+ G++D
Sbjct: 125 RKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVD 184
Query: 118 AAVECFYAAPVRS-------------------------------------VITWTAMITG 140
+AV F PV+ V + +I G
Sbjct: 185 SAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVG 244
Query: 141 YMKFGRVESAERL---------------FREMSLKTLVTWNAMIAGYVENGRAEDGLKLF 185
Y + G+VE+A L FRE K +V+WN+MI Y++ G LF
Sbjct: 245 YGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLF 304
Query: 186 KSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKC 245
M + + +S +++ G ++S ++ L + P + D + ++S YA
Sbjct: 305 DQMKDR----DTISWNTMIDGYVHVSRME---DAFALFSEMP-NRDAHSWNMMVSGYASV 356
Query: 246 GDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVL 305
G+++ A F + P K VSWN++I+ Y ++ ++A+ LF M +G KPD T ++L
Sbjct: 357 GNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLL 416
Query: 306 LACNHAGLVD--LGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFK 363
A GLV+ LG+Q ++V+ I P H A ++ + R G + E+ + M K
Sbjct: 417 SAS--TGLVNLRLGMQMHQIVVKTV-IPDVPVHNA-LITMYSRCGEIMESRRIFDEMKLK 472
Query: 364 PHPAIFGTLLGACRIHKN 381
+ ++G H N
Sbjct: 473 REVITWNAMIGGYAFHGN 490
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 168/386 (43%), Gaps = 67/386 (17%)
Query: 54 VGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVAC 113
+ AR F+++E ++T +WNTMISGY + M +A LF VMP+++ V+W+ M+SGYV+C
Sbjct: 56 IAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSC 115
Query: 114 GD---LDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIA 170
G L+ A + F P R +W MI+GY K R+ A LF +M + V+W+AMI
Sbjct: 116 GGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMIT 175
Query: 171 GYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLS--ALQLGK----------- 217
G+ +NG + + LF+ M + P +L + L+ LS A LG+
Sbjct: 176 GFCQNGEVDSAVVLFRKMPVKDSSP-LCALVAGLIKNERLSEAAWVLGQYGSLVSGREDL 234
Query: 218 ---------------QVHQLVC-----------------KSPLSSDTTAGTSLISMYAKC 245
QV C + + + S+I Y K
Sbjct: 235 VYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKV 294
Query: 246 GDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVL 305
GD+ A LF Q+ +D +SWN MI GY E A LF EM + W V+
Sbjct: 295 GDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAH-SWNMMVS-- 351
Query: 306 LACNHAGLVDLGVQYFNMMVRDFGIKTKPEH---YACMVDLLGRAGRLPEAVDLIKSMPF 362
G V+L YF KT +H + ++ + EAVDL M
Sbjct: 352 -GYASVGNVELARHYFE--------KTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNI 402
Query: 363 ---KPHPAIFGTLLGACRIHKNLDLA 385
KP P +LL A NL L
Sbjct: 403 EGEKPDPHTLTSLLSASTGLVNLRLG 428
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 301 bits (772), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 167/467 (35%), Positives = 255/467 (54%), Gaps = 34/467 (7%)
Query: 22 NFEQARQLFEKIPEPNTVSYNIMLACH-----LHHFGVGSARAFFDRMEVKDTASWNTMI 76
N AR +F++ PNT Y +L + LH SA +FF M + N I
Sbjct: 72 NLSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLH---ASSAFSFFRLMVNRSVPRPNHFI 128
Query: 77 ----------------SGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAV 120
+ L L+ V+ S+++ VS + A
Sbjct: 129 YPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVS------HITLAR 182
Query: 121 ECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAED 180
+ F R+V++WTAM++GY + G + +A LF +M + + +WNA++A +NG +
Sbjct: 183 QLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLE 242
Query: 181 GLKLFKSML-ESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLI 239
+ LF+ M+ E +PN +++ VL C+ LQL K +H + LSSD SL+
Sbjct: 243 AVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLV 302
Query: 240 SMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRH---DGMKP 296
+Y KCG+L+EA +F +K + +WN+MI+ +A HG E+A+ +F+EM + +KP
Sbjct: 303 DLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKP 362
Query: 297 DWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDL 356
D ITF+ +L AC H GLV G YF++M FGI+ + EHY C++DLLGRAGR EA+++
Sbjct: 363 DHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEV 422
Query: 357 IKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRW 416
+ +M K AI+G+LL AC+IH +LDLAE A KNL+ L+P++ +AN+Y W
Sbjct: 423 MSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNW 482
Query: 417 EHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIH 463
E R R+ +K K PG+S IEI +EVH+F S D+ HPE I+
Sbjct: 483 EEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIY 529
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 136/286 (47%), Gaps = 14/286 (4%)
Query: 6 TVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRME 65
V ++L ++A + ARQLF+++ E N VS+ ML+ + + +A A F+ M
Sbjct: 161 VVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMP 220
Query: 66 VKDTASWNTMISGYAQVGLMGEASMLFAVMPEK-----NCVSWSAMVSGYVACGDLDAA- 119
+D SWN +++ Q GL EA LF M + N V+ ++S G L A
Sbjct: 221 ERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAK 280
Query: 120 -VECF-YAAPVRS-VITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENG 176
+ F Y + S V +++ Y K G +E A +F+ S K+L WN+MI + +G
Sbjct: 281 GIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHG 340
Query: 177 RAEDGLKLFKSMLE---SGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVC-KSPLSSDT 232
R+E+ + +F+ M++ + KP+ ++ +L C++ + G+ L+ + +
Sbjct: 341 RSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRI 400
Query: 233 TAGTSLISMYAKCGDLKEAWELFVQIPRK-DIVSWNAMISGYAQHG 277
LI + + G EA E+ + K D W ++++ HG
Sbjct: 401 EHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHG 446
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 160/425 (37%), Positives = 246/425 (57%), Gaps = 40/425 (9%)
Query: 73 NTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFY-------- 124
N++ISGY+ GL AS LF +K+ V+W+AM+ G+V G A+ F
Sbjct: 142 NSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVA 201
Query: 125 ------------AAPVRSVITWTAMITGYMKFGRV--------------------ESAER 152
A V V ++ Y++ GRV + A++
Sbjct: 202 ANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQK 261
Query: 153 LFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSA 212
+F EM + +VTW A+IAGYV++ + G+ +F+ ML+S PN +L+SVL C+++ A
Sbjct: 262 VFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGA 321
Query: 213 LQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISG 272
L G++VH + K+ + +TTAGT+LI +Y KCG L+EA +F ++ K++ +W AMI+G
Sbjct: 322 LHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMING 381
Query: 273 YAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKT 332
+A HG A LF M + P+ +TF+AVL AC H GLV+ G + F M F ++
Sbjct: 382 FAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEP 441
Query: 333 KPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNL 392
K +HYACMVDL GR G L EA LI+ MP +P ++G L G+C +HK+ +L ++AA +
Sbjct: 442 KADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRV 501
Query: 393 LELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSS 452
++L PS + Y LAN+Y+ W+ VAR+R+ MK+ +VVK+PG+SWIE+ ++ EF +
Sbjct: 502 IKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAF 561
Query: 453 DRLHP 457
D P
Sbjct: 562 DDKKP 566
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 93/216 (43%), Gaps = 7/216 (3%)
Query: 150 AERLFREMSLKTLVTWNAMIA----GYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLL 205
A RL ++ ++ W+++I G N R ++ M +G P+ + +L
Sbjct: 55 ARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRL--SFLAYRHMRRNGVIPSRHTFPPLLK 112
Query: 206 GCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVS 265
L Q H + K L SD SLIS Y+ G A LF KD+V+
Sbjct: 113 AVFKLRDSN-PFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVT 171
Query: 266 WNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMV 325
W AMI G+ ++G+ +A+ F EM+ G+ + +T V+VL A V G + +
Sbjct: 172 WTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYL 231
Query: 326 RDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMP 361
+K + +VD+ G+ +A + MP
Sbjct: 232 ETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMP 267
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 299 bits (766), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 175/515 (33%), Positives = 268/515 (52%), Gaps = 58/515 (11%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIPEP----NTVSYNIML-ACH-LHHFGV 54
M ++ VTW +I++ G +++ F ++ +T ++ I L AC L
Sbjct: 169 MPFRNAVTWTAIITGLVHA-GRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKY 227
Query: 55 GSA-------RAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMV 107
G A R F + V N++ + Y + G M + LF M E++ VSW++++
Sbjct: 228 GKAIHTHVIVRGFVTTLCVA-----NSLATMYTECGEMQDGLCLFENMSERDVVSWTSLI 282
Query: 108 SGYVACGDLDAAVECFY-------------------AAPVRSVITW-------------- 134
Y G AVE F A S + W
Sbjct: 283 VAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLN 342
Query: 135 ------TAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSM 188
+M+ Y G + SA LF+ M + +++W+ +I GY + G E+G K F M
Sbjct: 343 DSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWM 402
Query: 189 LESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDL 248
+SG KP +L S+L N++ ++ G+QVH L L ++T +SLI+MY+KCG +
Sbjct: 403 RQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSI 462
Query: 249 KEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLAC 308
KEA +F + R DIVS AMI+GYA+HG ++A+ LF++ G +PD +TF++VL AC
Sbjct: 463 KEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTAC 522
Query: 309 NHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAI 368
H+G +DLG YFNMM + ++ EHY CMVDLL RAGRL +A +I M +K +
Sbjct: 523 THSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVV 582
Query: 369 FGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKE 428
+ TLL AC+ +++ AA+ +LELDP+ AT V LAN+Y++ E A +R++MK
Sbjct: 583 WTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKA 642
Query: 429 NKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIH 463
V+K PG+S I+I V F S DR HP+ I+
Sbjct: 643 KGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIY 677
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 145/315 (46%), Gaps = 11/315 (3%)
Query: 56 SARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPE-KNCVSWSAMVSGYV--A 112
+AR FD+M D SW ++I Y EA +LF+ M + VS V V A
Sbjct: 58 AARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKA 117
Query: 113 CGDLD--AAVECFYAAPVR-----SVITWTAMITGYMKFGRVESAERLFREMSLKTLVTW 165
CG A E +A V+ SV ++++ Y + G+++ + R+F EM + VTW
Sbjct: 118 CGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTW 177
Query: 166 NAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCK 225
A+I G V GR ++GL F M S + + L C+ L ++ GK +H V
Sbjct: 178 TAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIV 237
Query: 226 SPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHL 285
+ SL +MY +CG++++ LF + +D+VSW ++I Y + G KA+
Sbjct: 238 RGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVET 297
Query: 286 FDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLG 345
F +MR+ + P+ TF ++ AC + G Q + V G+ M+ +
Sbjct: 298 FIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQ-LHCNVLSLGLNDSLSVSNSMMKMYS 356
Query: 346 RAGRLPEAVDLIKSM 360
G L A L + M
Sbjct: 357 TCGNLVSASVLFQGM 371
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/478 (23%), Positives = 185/478 (38%), Gaps = 113/478 (23%)
Query: 21 GNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTA---------- 70
GN ARQ+F+K+P + VS+ ++ ++ A F M V D A
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 71 -------SWN------------------------TMISGYAQVGLMGEASMLFAVMPEKN 99
S N +++ Y +VG + ++ +F+ MP +N
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRN 173
Query: 100 CVSWSAMVSGYVACGDLDAAVECFYAAP-------------------------------- 127
V+W+A+++G V G + F
Sbjct: 174 AVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHT 233
Query: 128 ---VRSVITW----TAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAED 180
VR +T ++ T Y + G ++ LF MS + +V+W ++I Y G+
Sbjct: 234 HVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVK 293
Query: 181 GLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLIS 240
++ F M S PN + S+ C++LS L G+Q+H V L+ + S++
Sbjct: 294 AVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMK 353
Query: 241 MYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWIT 300
MY+ CG+L A LF + +DI+SW+ +I GY Q G GE+ F MR G KP
Sbjct: 354 MYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFA 413
Query: 301 FVAVLLACNHAGLVDLGVQYF----------NMMVRD------------------FGIKT 332
++L + +++ G Q N VR FG
Sbjct: 414 LASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETD 473
Query: 333 KPE--HYACMVDLLGRAGRLPEAVDLIK---SMPFKPHPAIFGTLLGACRIHKNLDLA 385
+ + M++ G+ EA+DL + + F+P F ++L AC LDL
Sbjct: 474 RDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLG 531
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 156/439 (35%), Positives = 251/439 (57%), Gaps = 21/439 (4%)
Query: 19 KHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISG 78
K G ARQ+F+++P+P +YN M++ +L H V RM + +S
Sbjct: 81 KCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSM 140
Query: 79 YAQVGLMGEASMLFAVMPEKNC----------------VSWSAMVSGYVACGDLDAAVEC 122
+ ++M ++P C V +A+V YV G L++A
Sbjct: 141 VLKASNSRGSTM---ILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTV 197
Query: 123 FYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGR-AEDG 181
F +V+ T+MI+GYM G VE AE +F +K +V +NAM+ G+ +G A+
Sbjct: 198 FETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRS 257
Query: 182 LKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISM 241
+ ++ SM +G PN + SV+ CS L++ ++G+QVH + KS + + G+SL+ M
Sbjct: 258 VDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDM 317
Query: 242 YAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITF 301
YAKCG + +A +F Q+ K++ SW +MI GY ++G E+AL LF M+ ++P+++TF
Sbjct: 318 YAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTF 377
Query: 302 VAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMP 361
+ L AC+H+GLVD G + F M RD+ +K K EHYAC+VDL+GRAG L +A + ++MP
Sbjct: 378 LGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMP 437
Query: 362 FKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATG-YVQLANVYAAQNRWEHVA 420
+P I+ LL +C +H N++LA AA L +L+ G Y+ L+NVYA+ ++W++V+
Sbjct: 438 ERPDSDIWAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVS 497
Query: 421 RIRRSMKENKVVKAPGYSW 439
+IR MK ++ K G SW
Sbjct: 498 KIREVMKRRRISKTIGRSW 516
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 124/275 (45%), Gaps = 37/275 (13%)
Query: 110 YVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMI 169
++ CG L A + F P ++ + MI+GY+K G V+ L + MS
Sbjct: 79 HLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSY---------- 128
Query: 170 AGYVENGRAEDGLKLFKSMLESGAK------PNAL-------------SLTSVLLGCSNL 210
+G DG L + S ++ P +L L VL+
Sbjct: 129 -----SGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVD 183
Query: 211 SALQLGK-QVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAM 269
+ ++ GK + + V ++ + TS+IS Y G +++A E+F KDIV +NAM
Sbjct: 184 TYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAM 243
Query: 270 ISGYAQHG-AGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDF 328
+ G+++ G ++++ ++ M+ G P+ TF +V+ AC+ ++G Q +++
Sbjct: 244 VEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKS- 302
Query: 329 GIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFK 363
G+ T + + ++D+ + G + +A + M K
Sbjct: 303 GVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEK 337
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 4/156 (2%)
Query: 209 NLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNA 268
N A + GK++H + K+ D L+ ++ KCG L A ++F ++P+ + ++N
Sbjct: 46 NSPAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNY 105
Query: 269 MISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDF 328
MISGY +HG ++ L L M + G K D T VL A N G + + +V
Sbjct: 106 MISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHAR 165
Query: 329 GIKTKPE----HYACMVDLLGRAGRLPEAVDLIKSM 360
IK E +VD ++G+L A + ++M
Sbjct: 166 IIKCDVELDDVLITALVDTYVKSGKLESARTVFETM 201
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 293 bits (749), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 162/432 (37%), Positives = 242/432 (56%), Gaps = 10/432 (2%)
Query: 42 NIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVM----PE 97
N +L C+ A F + KD SW+T+I+ Y Q G EA ++F M E
Sbjct: 202 NSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTE 261
Query: 98 KNCVSWSAMVSGYVACGDLDAAVECFYAAPVRSVITW----TAMITGYMKFGRVESAERL 153
N + ++ A DL+ + A + + T TA++ YMK E A +
Sbjct: 262 PNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAV 321
Query: 154 FREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSML-ESGAKPNALSLTSVLLGCSNLSA 212
F + K +V+W A+I+G+ NG A ++ F ML E+ +P+A+ + VL CS L
Sbjct: 322 FSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGF 381
Query: 213 LQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISG 272
L+ K H V K S+ G SL+ +Y++CG L A ++F I KD V W ++I+G
Sbjct: 382 LEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITG 441
Query: 273 YAQHGAGEKALHLFDEM-RHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIK 331
Y HG G KAL F+ M + +KP+ +TF+++L AC+HAGL+ G++ F +MV D+ +
Sbjct: 442 YGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLA 501
Query: 332 TKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKN 391
EHYA +VDLLGR G L A+++ K MPF P P I GTLLGACRIH+N ++AE AK
Sbjct: 502 PNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKK 561
Query: 392 LLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRS 451
L EL+ + A Y+ ++NVY + WE+V ++R S+K+ + K S IEI +VH F +
Sbjct: 562 LFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVA 621
Query: 452 SDRLHPELASIH 463
D LHPE ++
Sbjct: 622 DDELHPEKEPVY 633
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 165/318 (51%), Gaps = 13/318 (4%)
Query: 57 ARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVM--PEKNCVSWSAMVSGYVACG 114
AR F M + WNT++ ++ E F+ M E+ +++ V+ ACG
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVA-LKACG 71
Query: 115 DLDAA-----VECFYAAPV---RSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWN 166
+L + F V + +++I Y+K GR+ A R+F E+ +VTW+
Sbjct: 72 ELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 131
Query: 167 AMIAGYVENGRAEDGLKLFKSM-LESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCK 225
+M++G+ +NG ++ F+ M + S P+ ++L +++ C+ LS +LG+ VH V +
Sbjct: 132 SMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIR 191
Query: 226 SPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHL 285
S+D + SL++ YAK KEA LF I KD++SW+ +I+ Y Q+GA +AL +
Sbjct: 192 RGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLV 251
Query: 286 FDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLG 345
F++M DG +P+ T + VL AC A ++ G + + +R G++T+ + +VD+
Sbjct: 252 FNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRK-GLETEVKVSTALVDMYM 310
Query: 346 RAGRLPEAVDLIKSMPFK 363
+ EA + +P K
Sbjct: 311 KCFSPEEAYAVFSRIPRK 328
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 136/302 (45%), Gaps = 13/302 (4%)
Query: 143 KFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTS 202
KF A ++F EM+ ++L WN ++ + E+ L F M KP+ +L
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65
Query: 203 VLLGCSNLSALQLGKQVHQLVCKS-PLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK 261
L C L + G+ +H V K L SD G+SLI MY KCG + EA +F ++ +
Sbjct: 66 ALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKP 125
Query: 262 DIVSWNAMISGYAQHGAGEKALHLFDEM-RHDGMKPDWITFVAVLLACNHAGLVDLGVQY 320
DIV+W++M+SG+ ++G+ +A+ F M + PD +T + ++ AC LG
Sbjct: 126 DIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCV 185
Query: 321 FNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHK 380
++R G +++ ++ EAV+L K + K I + + AC +
Sbjct: 186 HGFVIRR-GFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEK--DVISWSTVIACYVQN 242
Query: 381 NLDLAEFAAKNLLELD---PSSATGYVQLANVYAA----QNRWEHVARIRRSMK-ENKVV 432
N + D P+ AT L AA Q R H IR+ ++ E KV
Sbjct: 243 GAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVS 302
Query: 433 KA 434
A
Sbjct: 303 TA 304
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 293 bits (749), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 169/505 (33%), Positives = 267/505 (52%), Gaps = 52/505 (10%)
Query: 10 NSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVK-- 67
N +L+ + K G A LF ++P N +S+N+M+ + SA F+ M+ +
Sbjct: 197 NELLTLYPKA-GRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEF 255
Query: 68 --DTASWNTMISGYAQVG------------------LMGEA-SMLFAVMPEKNCVSWSAM 106
D +W +++S ++Q G + GEA ++ F+V E +S +
Sbjct: 256 KPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEK 315
Query: 107 VSGYVACGDLDA--------------------AVECFYAAPVRSVITWTAMITGYMKFGR 146
V GYV G + A F + + +W ++IT ++ G+
Sbjct: 316 VHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGK 375
Query: 147 VESAERLFREMS--------LKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNAL 198
++ A LF E+ +VTW ++I G GR +D L+ F+ M S N++
Sbjct: 376 LDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSV 435
Query: 199 SLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQI 258
++ +L C+ L AL LG+++H V ++ +S + +L++MYAKCG L E +F I
Sbjct: 436 TICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAI 495
Query: 259 PRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGV 318
KD++SWN++I GY HG EKAL +FD M G PD I VAVL AC+HAGLV+ G
Sbjct: 496 RDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGR 555
Query: 319 QYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRI 378
+ F M + FG++ + EHYAC+VDLLGR G L EA +++K+MP +P + G LL +CR+
Sbjct: 556 EIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRM 615
Query: 379 HKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYS 438
HKN+D+AE A L L+P Y+ L+N+Y+A RWE A +R K+ + K G S
Sbjct: 616 HKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSS 675
Query: 439 WIEISSEVHEFRSSDRLHPELASIH 463
WIE+ + ++F S + E +I+
Sbjct: 676 WIEVKKKKYKFSSGSIVQSEFETIY 700
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 102/191 (53%), Gaps = 3/191 (1%)
Query: 137 MITGYMKFGRVESAERLFREMSL---KTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGA 193
+I+ Y + G + A +F +SL L WN+++ V +G E+ L+L++ M + G
Sbjct: 95 LISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGL 154
Query: 194 KPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWE 253
+ L +L C L L + H V + L + L+++Y K G + +A+
Sbjct: 155 TGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYN 214
Query: 254 LFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGL 313
LFV++P ++ +SWN MI G++Q E A+ +F+ M+ + KPD +T+ +VL + G
Sbjct: 215 LFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGK 274
Query: 314 VDLGVQYFNMM 324
+ ++YF++M
Sbjct: 275 FEDVLKYFHLM 285
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 5/154 (3%)
Query: 214 QLGKQVH-QLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPR---KDIVSWNAM 269
Q +QVH Q++ + + +LIS+YA+ G L +A +F + D+ WN++
Sbjct: 70 QQCRQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSI 129
Query: 270 ISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFG 329
+ HG E AL L+ MR G+ D +L AC + G L + F+ V G
Sbjct: 130 LKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGL-CRAFHTQVIQIG 188
Query: 330 IKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFK 363
+K ++ L +AGR+ +A +L MP +
Sbjct: 189 LKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVR 222
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 291 bits (745), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 143/358 (39%), Positives = 214/358 (59%)
Query: 106 MVSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTW 165
M+ Y G+L A + F P R + T MI Y + G ++ A LF+++ +K V W
Sbjct: 164 MMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCW 223
Query: 166 NAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCK 225
AMI G V N L+LF+ M N + VL CS+L AL+LG+ VH V
Sbjct: 224 TAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVEN 283
Query: 226 SPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHL 285
+ G +LI+MY++CGD+ EA +F + KD++S+N MISG A HGA +A++
Sbjct: 284 QRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINE 343
Query: 286 FDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLG 345
F +M + G +P+ +T VA+L AC+H GL+D+G++ FN M R F ++ + EHY C+VDLLG
Sbjct: 344 FRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLG 403
Query: 346 RAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQ 405
R GRL EA I+++P +P + GTLL AC+IH N++L E AK L E + + YV
Sbjct: 404 RVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVL 463
Query: 406 LANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIH 463
L+N+YA+ +W+ IR SM+++ + K PG S IE+ +++HEF D HP +I+
Sbjct: 464 LSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIY 521
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 152/331 (45%), Gaps = 22/331 (6%)
Query: 19 KHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISG 78
K G A+++F+++P+ + V+ +M+ C+ + A F +++KDT W MI G
Sbjct: 170 KSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDG 229
Query: 79 YAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYV--ACGDLDAA-----VECFYAAPVRSV 131
+ M +A LF M +N VS + + V AC DL A V F +
Sbjct: 230 LVRNKEMNKALELFREMQMEN-VSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMEL 288
Query: 132 ITW--TAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSML 189
+ A+I Y + G + A R+FR M K ++++N MI+G +G + + + F+ M+
Sbjct: 289 SNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMV 348
Query: 190 ESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKS-PLSSDTTAGTSLISMYAKCGDL 248
G +PN ++L ++L CS+ L +G +V + + + ++ + + G L
Sbjct: 349 NRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRL 408
Query: 249 KEAWELFVQIP-RKDIVSWNAMISGYAQHGA---GEK-ALHLFDEMRHDGMKPDWITFVA 303
+EA+ IP D + ++S HG GEK A LF + PD T+V
Sbjct: 409 EEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLF-----ESENPDSGTYVL 463
Query: 304 VLLACNHAGLVDLGVQYFNMMVRDFGIKTKP 334
+ +G + M RD GI+ +P
Sbjct: 464 LSNLYASSGKWKESTEIRESM-RDSGIEKEP 493
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 144/323 (44%), Gaps = 46/323 (14%)
Query: 96 PEKNCVSWS---AMVSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYM-----KFGRV 147
P+ N + S ++S +C ++ A V +A +R+ A + + V
Sbjct: 19 PDSNTLRLSRRKTLISVLRSCKNI-AHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSV 77
Query: 148 ESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGC 207
+ A +F +S + + AMI G+V +GR+ DG+ L+ M+ + P+ +TSVL C
Sbjct: 78 DYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC 137
Query: 208 SNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAK----------------------- 244
L++ +++H V K S + G ++ +Y K
Sbjct: 138 D----LKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAAT 193
Query: 245 --------CGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKP 296
CG +KEA ELF + KD V W AMI G ++ KAL LF EM+ + +
Sbjct: 194 VMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSA 253
Query: 297 DWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDL 356
+ T V VL AC+ G ++LG ++ + V + ++ ++++ R G + EA +
Sbjct: 254 NEFTAVCVLSACSDLGALELG-RWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRV 312
Query: 357 IKSMPFKPHPAIFGTLLGACRIH 379
+ M K + + T++ +H
Sbjct: 313 FRVMRDKDVIS-YNTMISGLAMH 334
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 290 bits (741), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 162/437 (37%), Positives = 256/437 (58%), Gaps = 18/437 (4%)
Query: 42 NIMLACHLHHFGVGSARAFFDRME-VKDTASWNTMISGYAQVGLMGEASMLFAVMP---- 96
N M++ + V A+ FD + KD SWN+MI+G+++ L A LF M
Sbjct: 242 NAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWV 301
Query: 97 EKNCVSWSAMVSGYVACGDLDAAV--ECFYAAPVR----SVITWT-AMITGYMKF--GRV 147
E + +++ ++S AC + + + + ++ V + T A+I+ Y++F G +
Sbjct: 302 ETDIYTYTGLLS---ACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTM 358
Query: 148 ESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGC 207
E A LF + K L++WN++I G+ + G +ED +K F + S K + + +++L C
Sbjct: 359 EDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSC 418
Query: 208 SNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK-DIVSW 266
S+L+ LQLG+Q+H L KS S+ +SLI MY+KCG ++ A + F QI K V+W
Sbjct: 419 SDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAW 478
Query: 267 NAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVR 326
NAMI GYAQHG G+ +L LF +M + +K D +TF A+L AC+H GL+ G++ N+M
Sbjct: 479 NAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEP 538
Query: 327 DFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAE 386
+ I+ + EHYA VDLLGRAG + +A +LI+SMP P P + T LG CR +++A
Sbjct: 539 VYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMAT 598
Query: 387 FAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEV 446
A +LLE++P YV L+++Y+ +WE A +++ MKE V K PG+SWIEI ++V
Sbjct: 599 QVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQV 658
Query: 447 HEFRSSDRLHPELASIH 463
F + DR +P I+
Sbjct: 659 KAFNAEDRSNPLCQDIY 675
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 120/514 (23%), Positives = 208/514 (40%), Gaps = 105/514 (20%)
Query: 10 NSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVK-- 67
N IL ++ K G A LF+++P+ ++VS+N M++ + + A F M+
Sbjct: 39 NRILDSYIK-FGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGS 97
Query: 68 --DTASWNTMISG-----------------------------------YAQVGLMGEASM 90
D S++ ++ G YA+ + +A
Sbjct: 98 DVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFE 157
Query: 91 LFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPVRSVITW---------------- 134
F + E N VSW+A+++G+V D+ A +++ +T
Sbjct: 158 AFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPM 217
Query: 135 ------------------------TAMITGYMKFGRVESAERLFREM-SLKTLVTWNAMI 169
AMI+ Y G V A+R+F + K L++WN+MI
Sbjct: 218 FCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMI 277
Query: 170 AGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLS 229
AG+ ++ E +LF M + + + T +L CS GK +H +V K L
Sbjct: 278 AGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLE 337
Query: 230 SDTTAGTSLISMYAK--CGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFD 287
T+A +LISMY + G +++A LF + KD++SWN++I+G+AQ G E A+ F
Sbjct: 338 QVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFS 397
Query: 288 EMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRA 347
+R +K D F A+L +C+ + LG Q + + G + + ++ + +
Sbjct: 398 YLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKS-GFVSNEFVISSLIVMYSKC 456
Query: 348 GRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHK----NLDLAEFAAKNLLELD------- 396
G + A + + K + ++ H +LDL ++LD
Sbjct: 457 GIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAI 516
Query: 397 --PSSATGYVQ--------LANVYAAQNRWEHVA 420
S TG +Q + VY Q R EH A
Sbjct: 517 LTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYA 550
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 158/342 (46%), Gaps = 46/342 (13%)
Query: 66 VKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYA 125
+ D N ++ Y + G +G A+MLF MP+++ VSW+ M+SGY +CG L+ A C +
Sbjct: 32 ISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAW-CLFT 90
Query: 126 APVRS----------------------------------------VITWTAMITGYMKFG 145
RS V ++++ Y K
Sbjct: 91 CMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCE 150
Query: 146 RVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSM-LESGAKPNALSLTSVL 204
RVE A F+E+S V+WNA+IAG+V+ + L M +++ +A + +L
Sbjct: 151 RVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLL 210
Query: 205 LGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQI-PRKDI 263
+ L KQVH V K L + T ++IS YA CG + +A +F + KD+
Sbjct: 211 TLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDL 270
Query: 264 VSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNM 323
+SWN+MI+G+++H E A LF +M+ ++ D T+ +L AC+ G M
Sbjct: 271 ISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGM 330
Query: 324 MVRDFGIKTKPEHYACMVDLLGR--AGRLPEAVDLIKSMPFK 363
+++ G++ ++ + + G + +A+ L +S+ K
Sbjct: 331 VIKK-GLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSK 371
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 111/214 (51%), Gaps = 15/214 (7%)
Query: 119 AVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRA 178
A++C + + ++ Y+KFG + A LF EM + V+WN MI+GY G+
Sbjct: 26 AIKC---GSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 179 EDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSL 238
ED LF M SG+ + S + +L G +++ LG+QVH LV K + G+SL
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 239 ISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHD-GMKPD 297
+ MYAKC +++A+E F +I + VSWNA+I+G+ Q + A L M + D
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMD 202
Query: 298 WITFVAVL------LACN-----HAGLVDLGVQY 320
TF +L + CN HA ++ LG+Q+
Sbjct: 203 AGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQH 236
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 122/269 (45%), Gaps = 49/269 (18%)
Query: 4 KSTVTWNSILSAFAK---KHGNFEQARQLFEKIPEPNTVSYNIML-ACHLHH---FGVGS 56
K ++WNS+++ F+K K FE Q+ E + +Y +L AC FG
Sbjct: 268 KDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSL 327
Query: 57 ARAFFDRMEVKDTASWNTMISGYAQ--VGLMGEASMLFAVMPEKNCVSWSAMVSGYVACG 114
+ + T++ N +IS Y Q G M +A LF + K+ +SW+++++G+ G
Sbjct: 328 HGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKG 387
Query: 115 DLDAAVECF--------------YAAPVRSV-------------------------ITWT 135
+ AV+ F ++A +RS +
Sbjct: 388 LSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVIS 447
Query: 136 AMITGYMKFGRVESAERLFREMSLK-TLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAK 194
++I Y K G +ESA + F+++S K + V WNAMI GY ++G + L LF M K
Sbjct: 448 SLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVK 507
Query: 195 PNALSLTSVLLGCSNLSALQLGKQVHQLV 223
+ ++ T++L CS+ +Q G ++ L+
Sbjct: 508 LDHVTFTAILTACSHTGLIQEGLELLNLM 536
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 2/146 (1%)
Query: 230 SDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEM 289
SD ++ Y K G L A LF ++P++D VSWN MISGY G E A LF M
Sbjct: 33 SDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCM 92
Query: 290 RHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGR 349
+ G D +F +L DLG Q ++++ G + + +VD+ + R
Sbjct: 93 KRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKG-GYECNVYVGSSLVDMYAKCER 151
Query: 350 LPEAVDLIKSMPFKPHPAIFGTLLGA 375
+ +A + K + +P+ + L+
Sbjct: 152 VEDAFEAFKEIS-EPNSVSWNALIAG 176
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 288 bits (736), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 164/467 (35%), Positives = 265/467 (56%), Gaps = 14/467 (2%)
Query: 10 NSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDT 69
NS++ +A G E ++F+++P+ + VS+N +++ ++ + A F RM +
Sbjct: 85 NSLMGMYASL-GKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESN 143
Query: 70 ASWN--TMISGYAQVGLM-----GEASMLFAVMP-EKNCVSWSAMVSGYVACGDLDAAVE 121
++ T++S + + GE F V E + +A+V + CG LD A
Sbjct: 144 LKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGNALVDMFCKCGCLDKARA 203
Query: 122 CFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDG 181
F + ++V WT+M+ GY+ GR++ A LF +K +V W AM+ GYV+ R ++
Sbjct: 204 VFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEA 263
Query: 182 LKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISM 241
L+LF+ M +G +P+ L S+L GC+ AL+ GK +H + ++ ++ D GT+L+ M
Sbjct: 264 LELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDM 323
Query: 242 YAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITF 301
YAKCG ++ A E+F +I +D SW ++I G A +G +AL L+ EM + G++ D ITF
Sbjct: 324 YAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITF 383
Query: 302 VAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMP 361
VAVL ACNH G V G + F+ M ++ K EH +C++DLL RAG L EA +LI M
Sbjct: 384 VAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMR 443
Query: 362 FKPHPA---IFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEH 418
+ ++ +LL A R + N+ +AE A+ L +++ S ++ + LA+VYA+ NRWE
Sbjct: 444 GESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWED 503
Query: 419 VARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRL--HPELASIH 463
V +RR MK+ + K PG S IEI HEF D L HP++ I+
Sbjct: 504 VTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEIN 550
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 127/273 (46%), Gaps = 17/273 (6%)
Query: 161 TLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVH 220
+L+ +N M+ + L LF + G P+ +L VL L + G++VH
Sbjct: 10 SLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVH 69
Query: 221 QLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGE 280
K+ L D+ SL+ MYA G ++ ++F ++P++D+VSWN +IS Y +G E
Sbjct: 70 GYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFE 129
Query: 281 KALHLFDEMRHD-GMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYAC 339
A+ +F M + +K D T V+ L AC+ +++G + + +V +F + + +
Sbjct: 130 DAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGN--A 187
Query: 340 MVDLLGRAGRLPEAVDLIKSMPFKP----HPAIFGTLLGACRIHKNLDLAEFAAKNLLEL 395
+VD+ + G L +A + SM K +FG + RI + A+ L E
Sbjct: 188 LVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFG-YVSTGRIDE--------ARVLFER 238
Query: 396 DP-SSATGYVQLANVYAAQNRWEHVARIRRSMK 427
P + + N Y NR++ + R M+
Sbjct: 239 SPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQ 271
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 175/552 (31%), Positives = 284/552 (51%), Gaps = 56/552 (10%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLF-------EKIPEPNTVSYNIMLACHLHHFG 53
M ++T TW++++S +A + G E+A ++F E+ + + V + +L+
Sbjct: 179 MPERNTYTWSTMVSGYATR-GRVEEAIKVFNLFLREKEEGSDSDYV-FTAVLSSLAATIY 236
Query: 54 VGSARAFFDRMEVKD-----TASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVS 108
VG R + +K+ A N +++ Y++ + EA +F ++N ++WSAMV+
Sbjct: 237 VGLGRQI-HCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVT 295
Query: 109 GYVACGDLDAAVECF---YAAPV------------------------------------R 129
GY G+ AV+ F ++A + R
Sbjct: 296 GYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFER 355
Query: 130 SVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSML 189
+ TA++ Y K G + A + F + + + W ++I+GYV+N E+ L L++ M
Sbjct: 356 HLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMK 415
Query: 190 ESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLK 249
+G PN ++ SVL CS+L+ L+LGKQVH K + G++L +MY+KCG L+
Sbjct: 416 TAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLE 475
Query: 250 EAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACN 309
+ +F + P KD+VSWNAMISG + +G G++AL LF+EM +GM+PD +TFV ++ AC+
Sbjct: 476 DGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACS 535
Query: 310 HAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIF 369
H G V+ G YFNMM G+ K +HYACMVDLL RAG+L EA + I+S ++
Sbjct: 536 HKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLW 595
Query: 370 GTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKEN 429
LL AC+ H +L +A + L+ L ++ YVQL+ +Y A R V R+ + M+ N
Sbjct: 596 RILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRAN 655
Query: 430 KVVKAPGYSWIEISSEVHEFRSSDRLHPELASIHXXXXXXXXXXXXAGYVP--DLEFALH 487
V K G SWIE+ ++ H F D +HP + G+V D F
Sbjct: 656 GVSKEVGCSWIELKNQYHVFVVGDTMHPMIEETKDLVCLVSRQMIEEGFVTVLDSSFVEE 715
Query: 488 DVGEELKEQLLL 499
+ G +L ++
Sbjct: 716 EEGTQLSTSFII 727
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 189/412 (45%), Gaps = 54/412 (13%)
Query: 4 KSTVTWNSILSAFAKKHG--NFEQARQLFEK------IPEPNTVSYNIMLACHLHHFGVG 55
K V+WNS+++ +++ G + QLF + +P T++ L VG
Sbjct: 78 KDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVG 137
Query: 56 -SARAFFDRME-VKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVAC 113
A A +M D +++ Y + GL+ + +FA MPE+N +WS MVSGY
Sbjct: 138 RQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATR 197
Query: 114 GDLDAAVECF----------------------------YAAPVRSVITWT---------- 135
G ++ A++ F Y R + T
Sbjct: 198 GRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVA 257
Query: 136 ---AMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESG 192
A++T Y K + A ++F + +TW+AM+ GY +NG + + +KLF M +G
Sbjct: 258 LSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAG 317
Query: 193 AKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAW 252
KP+ ++ VL CS++ L+ GKQ+H + K A T+L+ MYAK G L +A
Sbjct: 318 IKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADAR 377
Query: 253 ELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAG 312
+ F + +D+ W ++ISGY Q+ E+AL L+ M+ G+ P+ T +VL AC+
Sbjct: 378 KGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLA 437
Query: 313 LVDLGVQYFNMMVR-DFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFK 363
++LG Q ++ FG++ + + + + G L + + + P K
Sbjct: 438 TLELGKQVHGHTIKHGFGLEVPIG--SALSTMYSKCGSLEDGNLVFRRTPNK 487
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 160/314 (50%), Gaps = 16/314 (5%)
Query: 54 VGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEA---SMLFAVMPEKNCVSWSAMVSG- 109
+ A + F+ + KD SWN++I+GY+Q G + + LF M ++ + + ++G
Sbjct: 65 LAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGI 124
Query: 110 YVACGDLDAAVECFYA-------APVRSVITWTAMITGYMKFGRVESAERLFREMSLKTL 162
+ A L ++ A + + T+++ Y K G VE ++F M +
Sbjct: 125 FKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNT 184
Query: 163 VTWNAMIAGYVENGRAEDGLKLFKSML---ESGAKPNALSLTSVLLGCSNLSALQLGKQV 219
TW+ M++GY GR E+ +K+F L E G+ + + T+VL + + LG+Q+
Sbjct: 185 YTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYV-FTAVLSSLAATIYVGLGRQI 243
Query: 220 HQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAG 279
H + K+ L +L++MY+KC L EA ++F ++ ++W+AM++GY+Q+G
Sbjct: 244 HCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGES 303
Query: 280 EKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYAC 339
+A+ LF M G+KP T V VL AC+ ++ G Q + +++ G +
Sbjct: 304 LEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLK-LGFERHLFATTA 362
Query: 340 MVDLLGRAGRLPEA 353
+VD+ +AG L +A
Sbjct: 363 LVDMYAKAGCLADA 376
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 104/197 (52%), Gaps = 7/197 (3%)
Query: 137 MITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDG---LKLFKSMLESGA 193
++ Y K G++ A +F + K +V+WN++I GY +NG ++LF+ M
Sbjct: 55 LVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDI 114
Query: 194 KPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWE 253
PNA +L + S+L + +G+Q H LV K D TSL+ MY K G +++ +
Sbjct: 115 LPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLK 174
Query: 254 LFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFD---EMRHDGMKPDWITFVAVLLACNH 310
+F +P ++ +W+ M+SGYA G E+A+ +F+ + +G D++ F AVL +
Sbjct: 175 VFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYV-FTAVLSSLAA 233
Query: 311 AGLVDLGVQYFNMMVRD 327
V LG Q + +++
Sbjct: 234 TIYVGLGRQIHCITIKN 250
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 14/183 (7%)
Query: 187 SMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCG 246
S ++ P+ +L L S L G+ VH + ++ S+ L++ YAKCG
Sbjct: 4 STFQTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCG 63
Query: 247 DLKEAWELFVQIPRKDIVSWNAMISGYAQHG---AGEKALHLFDEMRHDGMKPDWITFVA 303
L +A +F I KD+VSWN++I+GY+Q+G + + LF EMR + P+ T
Sbjct: 64 KLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAG 123
Query: 304 VLLACNHAGLVDLGVQYFNMMVR-----DFGIKTKPEHYACMVDLLGRAGRLPEAVDLIK 358
+ A + +G Q ++V+ D + T +V + +AG + + + +
Sbjct: 124 IFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTS------LVGMYCKAGLVEDGLKVFA 177
Query: 359 SMP 361
MP
Sbjct: 178 YMP 180
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 287 bits (734), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 160/465 (34%), Positives = 258/465 (55%), Gaps = 32/465 (6%)
Query: 4 KSTVTWNSILSAFAKKHGNFEQARQLFEKIP----EPNTVSYNIMLACHLHHFGVGSARA 59
++TV+W S ++ + +G +A + F + EPN +++ I L F GS
Sbjct: 34 ETTVSWTSRINLLTR-NGRLAEAAKEFSDMTLAGVEPNHITF-IALLSGCGDFTSGSE-- 89
Query: 60 FFDRMEVKDTASWNTMISGYA-QVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDA 118
+ ++ GYA ++GL + + +A++ Y G
Sbjct: 90 -----------ALGDLLHGYACKLGL-----------DRNHVMVGTAIIGMYSKRGRFKK 127
Query: 119 AVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRA 178
A F ++ +TW MI GYM+ G+V++A ++F +M + L++W AMI G+V+ G
Sbjct: 128 ARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQ 187
Query: 179 EDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSL 238
E+ L F+ M SG KP+ +++ + L C+NL AL G VH+ V ++ SL
Sbjct: 188 EEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSL 247
Query: 239 ISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDW 298
I +Y +CG ++ A ++F + ++ +VSWN++I G+A +G ++L F +M+ G KPD
Sbjct: 248 IDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDA 307
Query: 299 ITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIK 358
+TF L AC+H GLV+ G++YF +M D+ I + EHY C+VDL RAGRL +A+ L++
Sbjct: 308 VTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQ 367
Query: 359 SMPFKPHPAIFGTLLGACRIH-KNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWE 417
SMP KP+ + G+LL AC H N+ LAE K+L +L+ S + YV L+N+YAA +WE
Sbjct: 368 SMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWE 427
Query: 418 HVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASI 462
+++RR MK + K PG+S IEI +H F + D H E I
Sbjct: 428 GASKMRRKMKGLGLKKQPGFSSIEIDDCMHVFMAGDNAHVETTYI 472
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 286 bits (733), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 149/439 (33%), Positives = 256/439 (58%), Gaps = 11/439 (2%)
Query: 60 FFDRMEVKDTASWNTMISGYAQVGL-MGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDA 118
F ++VK+ +W T+I+G+ +G +G M ++ E V+ + A +D+
Sbjct: 169 IFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDS 228
Query: 119 AV--ECFYAAPVR-----SVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAG 171
+ +A+ ++ ++ +++ Y + G + A+ F EM K L+TWN +I+
Sbjct: 229 VTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISE 288
Query: 172 YVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSD 231
+E + + L +F+ G PN + TS++ C+N++AL G+Q+H + + + +
Sbjct: 289 -LERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKN 347
Query: 232 TTAGTSLISMYAKCGDLKEAWELFVQI-PRKDIVSWNAMISGYAQHGAGEKALHLFDEMR 290
+LI MYAKCG++ ++ +F +I R+++VSW +M+ GY HG G +A+ LFD+M
Sbjct: 348 VELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMV 407
Query: 291 HDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRL 350
G++PD I F+AVL AC HAGLV+ G++YFN+M ++GI + Y C+VDLLGRAG++
Sbjct: 408 SSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKI 467
Query: 351 PEAVDLIKSMPFKPHPAIFGTLLGACRIHK-NLDLAEFAAKNLLELDPSSATGYVQLANV 409
EA +L++ MPFKP + +G +LGAC+ HK N ++ AA+ ++EL P YV L+ +
Sbjct: 468 GEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYI 527
Query: 410 YAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIHXXXXXX 469
YAA+ +W AR+R+ M+ K G SWI + ++V F SD++ P +S++
Sbjct: 528 YAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLL 587
Query: 470 XXXXXXAGYVPDLEFALHD 488
AGYVP+L+ ++D
Sbjct: 588 IEETREAGYVPELDSLVND 606
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 153/320 (47%), Gaps = 42/320 (13%)
Query: 74 TMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFY--------- 124
+I Y + GL+ EA LF MP+++ V+W+AM++GY + A ECF+
Sbjct: 50 NLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSP 109
Query: 125 -----AAPVRS-----VITWTAMITGYM-KFG--------------------RVESAERL 153
++ ++S V+ + A++ G + K G +E+A +
Sbjct: 110 NEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLI 169
Query: 154 FREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSAL 213
FR++ +K VTW +I G+ G GLK++K ML A+ +T + +++ ++
Sbjct: 170 FRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSV 229
Query: 214 QLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGY 273
GKQ+H V K S+ S++ +Y +CG L EA F ++ KD+++WN +IS
Sbjct: 230 TTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISEL 289
Query: 274 AQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTK 333
+ + E AL +F G P+ TF +++ AC + ++ G Q + R G
Sbjct: 290 ERSDSSE-ALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRR-GFNKN 347
Query: 334 PEHYACMVDLLGRAGRLPEA 353
E ++D+ + G +P++
Sbjct: 348 VELANALIDMYAKCGNIPDS 367
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 104/228 (45%), Gaps = 2/228 (0%)
Query: 127 PVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFK 186
P + I T +I Y + G VE A LF EM + +V W AMI GY + + F
Sbjct: 41 PKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFH 100
Query: 187 SMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCG 246
M++ G PN +L+SVL C N+ L G VH +V K + ++++MYA C
Sbjct: 101 EMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCS 160
Query: 247 -DLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVL 305
++ A +F I K+ V+W +I+G+ G G L ++ +M + + +
Sbjct: 161 VTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAV 220
Query: 306 LACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEA 353
A V G Q +++ G ++ ++DL R G L EA
Sbjct: 221 RASASIDSVTTGKQIHASVIKR-GFQSNLPVMNSILDLYCRCGYLSEA 267
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 146/329 (44%), Gaps = 58/329 (17%)
Query: 1 MKVKSTVTWNSILSAF---AKKHGNFEQARQLF----EKIP------------------- 34
+KVK+ VTW ++++ F G + +Q+ E P
Sbjct: 173 IKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTG 232
Query: 35 ------------EPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQV 82
+ N N +L + + A+ +F ME KD +WNT+IS +
Sbjct: 233 KQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERS 292
Query: 83 GLMGEASMLFAVMPEK----NCVSWSAMVSGYVACGDLDAAVEC--------FYAAPVRS 130
EA ++F + NC +++++V+ AC ++ AA+ C F ++
Sbjct: 293 D-SSEALLMFQRFESQGFVPNCYTFTSLVA---ACANI-AALNCGQQLHGRIFRRGFNKN 347
Query: 131 VITWTAMITGYMKFGRVESAERLFREM-SLKTLVTWNAMIAGYVENGRAEDGLKLFKSML 189
V A+I Y K G + ++R+F E+ + LV+W +M+ GY +G + ++LF M+
Sbjct: 348 VELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMV 407
Query: 190 ESGAKPNALSLTSVLLGCSNLSALQLG-KQVHQLVCKSPLSSDTTAGTSLISMYAKCGDL 248
SG +P+ + +VL C + ++ G K + + + ++ D ++ + + G +
Sbjct: 408 SSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKI 467
Query: 249 KEAWELFVQIPRK-DIVSWNAMISGYAQH 276
EA+EL ++P K D +W A++ H
Sbjct: 468 GEAYELVERMPFKPDESTWGAILGACKAH 496
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 171/513 (33%), Positives = 283/513 (55%), Gaps = 52/513 (10%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIPE----PNTVS-YNIMLAC-HLHHFGV 54
M K+ ++W ++LS + K++ ++A +LF + + P+ + +I+ +C LH G
Sbjct: 310 MPNKNIISWTTLLSGY-KQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGF 368
Query: 55 GS-ARAFFDRMEV-KDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVA 112
G+ A+ + + D+ N++I YA+ + +A +F + + V ++AM+ GY
Sbjct: 369 GTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSR 428
Query: 113 CG---DLDAAVECFYAAPVR----SVITWTAM---------------ITGYM-KFGR--- 146
G +L A+ F R S++T+ ++ I G M K+G
Sbjct: 429 LGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLD 488
Query: 147 ----------------VESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLE 190
++ + +F EM +K LV WN+M AGYV+ E+ L LF +
Sbjct: 489 IFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQL 548
Query: 191 SGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKE 250
S +P+ + +++ NL+++QLG++ H + K L + +L+ MYAKCG ++
Sbjct: 549 SRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPED 608
Query: 251 AWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNH 310
A + F +D+V WN++IS YA HG G+KAL + ++M +G++P++ITFV VL AC+H
Sbjct: 609 AHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSH 668
Query: 311 AGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFG 370
AGLV+ G++ F +M+R FGI+ + EHY CMV LLGRAGRL +A +LI+ MP KP ++
Sbjct: 669 AGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWR 727
Query: 371 TLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENK 430
+LL C N++LAE AA+ + DP + + L+N+YA++ W ++R MK
Sbjct: 728 SLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEG 787
Query: 431 VVKAPGYSWIEISSEVHEFRSSDRLHPELASIH 463
VVK PG SWI I+ EVH F S D+ H + I+
Sbjct: 788 VVKEPGRSWIGINKEVHIFLSKDKSHCKANQIY 820
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/378 (28%), Positives = 181/378 (47%), Gaps = 70/378 (18%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLF-----EKIPEPNT-VSYNIMLAC------- 47
M ++ V+W++++SA HG +E++ +F + PN + + + AC
Sbjct: 105 MPERNLVSWSTMVSA-CNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRG 163
Query: 48 -----HLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVS 102
L F V S FDR D +I Y + G + A ++F +PEK+ V+
Sbjct: 164 RWMVFQLQSFLVKSG---FDR----DVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVT 216
Query: 103 WSAMVSGYVACGDLDAAVECFYAAPVRSVI------------------------------ 132
W+ M+SG V G +++ FY +V+
Sbjct: 217 WTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHIL 276
Query: 133 ---------TWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLK 183
+I Y+K GRV +A +LF M K +++W +++GY +N ++ ++
Sbjct: 277 RYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAME 336
Query: 184 LFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYA 243
LF SM + G KP+ + +S+L C++L AL G QVH K+ L +D+ SLI MYA
Sbjct: 337 LFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYA 396
Query: 244 KCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAG---EKALHLFDEMRHDGMKPDWIT 300
KC L +A ++F D+V +NAMI GY++ G +AL++F +MR ++P +T
Sbjct: 397 KCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLT 456
Query: 301 FVAVLLACNHAGLVDLGV 318
FV++L A A L LG+
Sbjct: 457 FVSLLRA--SASLTSLGL 472
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 148/296 (50%), Gaps = 11/296 (3%)
Query: 35 EPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAV 94
E +T NI++ + G+ AR F++M ++ SW+TM+S G+ E+ ++F
Sbjct: 76 ELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLE 135
Query: 95 M--PEKNCVSWSAMVSGYVACGDLDA-------AVECFYAAP--VRSVITWTAMITGYMK 143
K+ + + S AC LD ++ F R V T +I Y+K
Sbjct: 136 FWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLK 195
Query: 144 FGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSV 203
G ++ A +F + K+ VTW MI+G V+ GR+ L+LF ++E P+ L++V
Sbjct: 196 DGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTV 255
Query: 204 LLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDI 263
L CS L L+ GKQ+H + + L D + LI Y KCG + A +LF +P K+I
Sbjct: 256 LSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNI 315
Query: 264 VSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQ 319
+SW ++SGY Q+ ++A+ LF M G+KPD ++L +C + G Q
Sbjct: 316 ISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQ 371
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 107/230 (46%), Gaps = 4/230 (1%)
Query: 137 MITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGA-KP 195
+I Y + G + A ++F +M + LV+W+ M++ +G E+ L +F + P
Sbjct: 85 LINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSP 144
Query: 196 NALSLTSVLLGCSNLSALQ--LGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWE 253
N L+S + CS L + Q+ + KS D GT LI Y K G++ A
Sbjct: 145 NEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARL 204
Query: 254 LFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGL 313
+F +P K V+W MISG + G +L LF ++ D + PD VL AC+
Sbjct: 205 VFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPF 264
Query: 314 VDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFK 363
++ G Q ++R +G++ ++D + GR+ A L MP K
Sbjct: 265 LEGGKQIHAHILR-YGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNK 313
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 286 bits (731), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 145/378 (38%), Positives = 223/378 (58%), Gaps = 3/378 (0%)
Query: 89 SMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVE 148
S F E + + +++ Y G L A F R V W AMITGY + G ++
Sbjct: 106 SQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMK 165
Query: 149 SAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSM-LESGAKPNALSLTSVLLGC 207
+A LF M K + +W +I+G+ +NG + LK+F M + KPN +++ SVL C
Sbjct: 166 AAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPAC 225
Query: 208 SNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQI-PRKDIVSW 266
+NL L++G+++ ++ + + I MY+KCG + A LF ++ ++++ SW
Sbjct: 226 ANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSW 285
Query: 267 NAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVR 326
N+MI A HG ++AL LF +M +G KPD +TFV +LLAC H G+V G + F M
Sbjct: 286 NSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEE 345
Query: 327 DFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAE 386
I K EHY CM+DLLGR G+L EA DLIK+MP KP ++GTLLGAC H N+++AE
Sbjct: 346 VHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAE 405
Query: 387 FAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSW-IEISSE 445
A++ L +L+P++ V ++N+YAA +W+ V R+R+ MK+ + KA GYS+ +E+ +
Sbjct: 406 IASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVD 465
Query: 446 VHEFRSSDRLHPELASIH 463
VH+F D+ HP I+
Sbjct: 466 VHKFTVEDKSHPRSYEIY 483
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 285 bits (728), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 144/374 (38%), Positives = 232/374 (62%), Gaps = 6/374 (1%)
Query: 73 NTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPVRSVI 132
N +I +A G +G AS LF + + V+WS+M SGY G +D A+ F P + +
Sbjct: 151 NALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQV 210
Query: 133 TWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESG 192
W MITG +K ++SA LF + K +VTWNAMI+GYV G ++ L +FK M ++G
Sbjct: 211 AWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAG 270
Query: 193 AKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKS-PLSSDTTAGT----SLISMYAKCGD 247
P+ +++ S+L C+ L L+ GK++H + ++ +SS GT +LI MYAKCG
Sbjct: 271 EHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGS 330
Query: 248 LKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLA 307
+ A E+F + +D+ +WN +I G A H A E ++ +F+EM+ + P+ +TF+ V+LA
Sbjct: 331 IDRAIEVFRGVKDRDLSTWNTLIVGLALHHA-EGSIEMFEEMQRLKVWPNEVTFIGVILA 389
Query: 308 CNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPA 367
C+H+G VD G +YF++M + I+ +HY CMVD+LGRAG+L EA ++SM +P+
Sbjct: 390 CSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAI 449
Query: 368 IFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMK 427
++ TLLGAC+I+ N++L ++A + LL + + YV L+N+YA+ +W+ V ++R+
Sbjct: 450 VWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFD 509
Query: 428 ENKVVKAPGYSWIE 441
+ +V K G S IE
Sbjct: 510 DTRVKKPTGVSLIE 523
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 137/330 (41%), Gaps = 52/330 (15%)
Query: 13 LSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASW 72
L F G+ A +LF+ + + V+++ M + + + A FD M KD +W
Sbjct: 153 LILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAW 212
Query: 73 NTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVAC------------------- 113
N MI+G + M A LF EK+ V+W+AM+SGYV C
Sbjct: 213 NVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEH 272
Query: 114 ----------------GDLDAA----VECFYAAPVRSVI-----TWTAMITGYMKFGRVE 148
GDL+ + A V S I W A+I Y K G ++
Sbjct: 273 PDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSID 332
Query: 149 SAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCS 208
A +FR + + L TWN +I G + AE +++F+ M PN ++ V+L CS
Sbjct: 333 RAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACS 391
Query: 209 NLSALQLGKQVHQLVCKS-PLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPR--KDIVS 265
+ + G++ L+ + + ++ M + G L+EA+ +FV+ + + +
Sbjct: 392 HSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAF-MFVESMKIEPNAIV 450
Query: 266 WNAMISG---YAQHGAGEKALHLFDEMRHD 292
W ++ Y G+ A MR D
Sbjct: 451 WRTLLGACKIYGNVELGKYANEKLLSMRKD 480
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 128/293 (43%), Gaps = 18/293 (6%)
Query: 145 GRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVL 204
G ++ A +LF E+ + N ++ G ++ + E + L+ M + G P+ + T VL
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 119
Query: 205 LGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIV 264
CS L G H V + + +LI +A CGDL A ELF + V
Sbjct: 120 KACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKV 179
Query: 265 SWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMM 324
+W++M SGYA+ G ++A+ LFDEM + D + + ++ C +D + F+
Sbjct: 180 AWSSMTSGYAKRGKIDEAMRLFDEMPY----KDQVAWNVMITGCLKCKEMDSARELFDRF 235
Query: 325 VRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSM-PFKPHPAIFG--TLLGACRIHKN 381
+ + M+ G EA+ + K M HP + +LL AC + +
Sbjct: 236 TEKDVVT-----WNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGD 290
Query: 382 LDLAEFAAKNLLELDPSSATGYV------QLANVYAAQNRWEHVARIRRSMKE 428
L+ + +LE S++ YV L ++YA + + R +K+
Sbjct: 291 LETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKD 343
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 179/544 (32%), Positives = 285/544 (52%), Gaps = 29/544 (5%)
Query: 51 HFGVGSARAF--FDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNC----VSWS 104
H G + A+ F+ ++ K+ +WN+MI+ + L +A +F M +
Sbjct: 206 HDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLL 265
Query: 105 AMVSGYVACGDL--DAAVEC---FYAAPVRS-VITWTAMITGYMK-----FGRVESAERL 153
+ S DL + +C ++ V+S ++T T + T +K +L
Sbjct: 266 NICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKL 325
Query: 154 FREMS-LKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSA 212
F EMS + +V WN +I + E + LF + + P+ + +SVL C+ L
Sbjct: 326 FMEMSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVT 384
Query: 213 LQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISG 272
+ +H V K +DT SLI YAKCG L +F + +D+VSWN+M+
Sbjct: 385 ARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKA 444
Query: 273 YAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKT 332
Y+ HG + L +F +M + PD TF+A+L AC+HAG V+ G++ F M
Sbjct: 445 YSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLP 501
Query: 333 KPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNL 392
+ HYAC++D+L RA R EA ++IK MP P ++ LLG+CR H N L + AA L
Sbjct: 502 QLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKL 561
Query: 393 LEL-DPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRS 451
EL +P+++ Y+Q++N+Y A+ + + M+ +V K P SW EI ++VHEF S
Sbjct: 562 KELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFAS 621
Query: 452 SDRLHPELASIHXXXXXXXXXXXXAGYVPDLEFALHDVGEELKEQL-LLWHSEKLAIAYG 510
R P+ +++ GYVP++ A D+ +E +E+ LL HSEKLA+A+
Sbjct: 622 GGRHRPDKEAVYRELKRLISWLKEMGYVPEMRSASQDIEDEEQEEDNLLHHSEKLALAFA 681
Query: 511 LLK----VPLGLP-IRVFKNLRVCGDCHTAIKYISAIEGREIIVRDTTRFHHFKDGFCSC 565
+++ G+ I++ KN R+C DCH +K S + G+EI++RD+ RFHHFKD CSC
Sbjct: 682 VMEGRKSSDCGVNLIQIMKNTRICIDCHNFMKLASKLLGKEILMRDSNRFHHFKDSSCSC 741
Query: 566 SDYW 569
+DYW
Sbjct: 742 NDYW 745
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 114/454 (25%), Positives = 204/454 (44%), Gaps = 65/454 (14%)
Query: 25 QARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGL 84
Q++Q + + + N++ +LHH + + ++ N +I+ YA+ G
Sbjct: 57 QSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCY-----SQNVILANFLINMYAKCGN 111
Query: 85 MGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPVR--------------- 129
+ A +F MPE+N VSW+A+++GYV G+ C +++ +
Sbjct: 112 ILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGF-CLFSSMLSHCFPNEFTLSSVLTS 170
Query: 130 --------------------SVITWTAMITGYMKFGRVES------AERLFREMSLKTLV 163
S+ A+I+ Y GR A +F + K LV
Sbjct: 171 CRYEPGKQVHGLALKLGLHCSIYVANAVISMY---GRCHDGAAAYEAWTVFEAIKFKNLV 227
Query: 164 TWNAMIAGYVENGRAEDGLKLFKSMLESGA---KPNALSLTSVLLGCSNLSALQLGK--- 217
TWN+MIA + + + +F M G + L++ S L S+L ++ K
Sbjct: 228 TWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCL 287
Query: 218 QVHQLVCKSPLSSDTTAGTSLISMYAK-CGDLKEAWELFVQIPR-KDIVSWNAMISGYAQ 275
Q+H L KS L + T T+LI +Y++ D + ++LF+++ +DIV+WN +I+ +A
Sbjct: 288 QLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAV 347
Query: 276 HGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLG-VQYFNMMVRDFGIKTKP 334
+ E+A+HLF ++R + + PDW TF +VL AC AGLV + V G
Sbjct: 348 YDP-ERAIHLFGQLRQEKLSPDWYTFSSVLKAC--AGLVTARHALSIHAQVIKGGFLADT 404
Query: 335 EHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLE 394
++ + G L + + M + + + ++L A +H +D + ++
Sbjct: 405 VLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVS-WNSMLKAYSLHGQVD-SILPVFQKMD 462
Query: 395 LDPSSATGYVQLANVYAAQNRWEHVARIRRSMKE 428
++P SAT ++ L + + R E RI RSM E
Sbjct: 463 INPDSAT-FIALLSACSHAGRVEEGLRIFRSMFE 495
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 121/272 (44%), Gaps = 47/272 (17%)
Query: 75 MISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPV------ 128
MI+ +Q+ +V+P + + V GD+ AV FY+APV
Sbjct: 1 MITSLSQISFGTLRRFGSSVLPSALKREFVEGLRTLVRSGDIRRAVSLFYSAPVELQSQQ 60
Query: 129 ---------------------------------RSVITWTAMITGYMKFGRVESAERLFR 155
++VI +I Y K G + A ++F
Sbjct: 61 AYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFD 120
Query: 156 EMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQL 215
M + +V+W A+I GYV+ G ++G LF SML S PN +L+SVL C +
Sbjct: 121 TMPERNVVSWTALITGYVQAGNEQEGFCLFSSML-SHCFPNEFTLSSVLTSCR----YEP 175
Query: 216 GKQVHQLVCKSPLSSDTTAGTSLISMYAKCGD---LKEAWELFVQIPRKDIVSWNAMISG 272
GKQVH L K L ++ISMY +C D EAW +F I K++V+WN+MI+
Sbjct: 176 GKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAA 235
Query: 273 YAQHGAGEKALHLFDEMRHDGMKPDWITFVAV 304
+ G+KA+ +F M DG+ D T + +
Sbjct: 236 FQCCNLGKKAIGVFMRMHSDGVGFDRATLLNI 267
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 103/230 (44%), Gaps = 23/230 (10%)
Query: 4 KSTVTWNSILSAFAKKHGN-----FEQARQLFEKI-PEPNTVSYNIMLACHLHHFGVGSA 57
+ V WN I++AFA F Q RQ EK+ P+ T S +++ AC G+ +A
Sbjct: 333 RDIVAWNGIITAFAVYDPERAIHLFGQLRQ--EKLSPDWYTFS-SVLKACA----GLVTA 385
Query: 58 R-AFFDRMEV------KDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGY 110
R A +V DT N++I YA+ G + +F M ++ VSW++M+ Y
Sbjct: 386 RHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAY 445
Query: 111 VACGDLDAAVECFYAAPVR-SVITWTAMITGYMKFGRVESAERLFREMSLK--TLVTWNA 167
G +D+ + F + T+ A+++ GRVE R+FR M K TL N
Sbjct: 446 SLHGQVDSILPVFQKMDINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNH 505
Query: 168 MIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGK 217
RAE + + + + P+A+ ++L C +LGK
Sbjct: 506 YACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGK 555
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 154/459 (33%), Positives = 261/459 (56%), Gaps = 19/459 (4%)
Query: 21 GNFEQARQLFEKIPEPNTVSYNIMLAC-------HLHHFGVGSARAFFDRMEVKDTASWN 73
G+ A +F P PNT +N M+ + H + R + DT ++
Sbjct: 61 GHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFP 120
Query: 74 TMISGYAQVG-------LMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYAA 126
++ +V + G+ ++F + V+ ++ Y +CG L A + F
Sbjct: 121 FVLKIAVRVSDVWFGRQIHGQV-VVFGFDSSVHVVT--GLIQMYFSCGGLGDARKMFDEM 177
Query: 127 PVRSVITWTAMITGYMKFGRVESAERLFREMS--LKTLVTWNAMIAGYVENGRAEDGLKL 184
V+ V W A++ GY K G ++ A L M ++ V+W +I+GY ++GRA + +++
Sbjct: 178 LVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEV 237
Query: 185 FKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAK 244
F+ ML +P+ ++L +VL C++L +L+LG+++ V ++ + ++I MYAK
Sbjct: 238 FQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAK 297
Query: 245 CGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAV 304
G++ +A ++F + +++V+W +I+G A HG G +AL +F+ M G++P+ +TF+A+
Sbjct: 298 SGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAI 357
Query: 305 LLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKP 364
L AC+H G VDLG + FN M +GI EHY CM+DLLGRAG+L EA ++IKSMPFK
Sbjct: 358 LSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKA 417
Query: 365 HPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRR 424
+ AI+G+LL A +H +L+L E A L++L+P+++ Y+ LAN+Y+ RW+ +R
Sbjct: 418 NAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRN 477
Query: 425 SMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIH 463
MK V K G S IE+ + V++F S D HP++ IH
Sbjct: 478 MMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIH 516
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 126/267 (47%), Gaps = 24/267 (8%)
Query: 3 VKSTVTWNSILSAFAKKHGNFEQARQLFEKI----PEPNTVS-YNIMLAC-HLHHFGVGS 56
V++ V+W ++S +AK G +A ++F+++ EP+ V+ ++ AC L +G
Sbjct: 212 VRNEVSWTCVISGYAKS-GRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGE 270
Query: 57 AR-AFFDRMEVKDTASWNT-MISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACG 114
++ D + S N +I YA+ G + +A +F + E+N V+W+ +++G G
Sbjct: 271 RICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHG 330
Query: 115 DLDAAVECF---YAAPVR-SVITWTAMITGYMKFGRVESAERLFREMSLK-----TLVTW 165
A+ F A VR + +T+ A+++ G V+ +RLF M K + +
Sbjct: 331 HGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHY 390
Query: 166 NAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQ-VHQLVC 224
MI G+ + ++ KSM K NA S+L + L+LG++ + +L+
Sbjct: 391 GCMIDLLGRAGKLREADEVIKSM---PFKANAAIWGSLLAASNVHHDLELGERALSELIK 447
Query: 225 KSPLSSDTTAGTSLISMYAKCGDLKEA 251
P +S L ++Y+ G E+
Sbjct: 448 LEPNNSGNY--MLLANLYSNLGRWDES 472
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 283 bits (725), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 157/429 (36%), Positives = 243/429 (56%), Gaps = 29/429 (6%)
Query: 54 VGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVAC 113
+ SAR FD++E DTASWN +I+G A G EA +F+ M SG++
Sbjct: 321 LNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRS----------SGFIPD 370
Query: 114 GDLDAAVECFYAAPV---------RSVITW---------TAMITGYMKFGRVESAERLFR 155
++ C P+ +I W +++T Y + LF
Sbjct: 371 AISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFE 430
Query: 156 EMSLKT-LVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQ 214
+ V+WN ++ +++ + + L+LFK ML S +P+ +++ ++L GC +S+L+
Sbjct: 431 DFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLK 490
Query: 215 LGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYA 274
LG QVH K+ L+ + LI MYAKCG L +A +F + +D+VSW+ +I GYA
Sbjct: 491 LGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYA 550
Query: 275 QHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKP 334
Q G GE+AL LF EM+ G++P+ +TFV VL AC+H GLV+ G++ + M + GI
Sbjct: 551 QSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTK 610
Query: 335 EHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLE 394
EH +C+VDLL RAGRL EA I M +P ++ TLL AC+ N+ LA+ AA+N+L+
Sbjct: 611 EHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILK 670
Query: 395 LDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDR 454
+DP ++T +V L +++A+ WE+ A +R SMK++ V K PG SWIEI ++H F + D
Sbjct: 671 IDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDI 730
Query: 455 LHPELASIH 463
HPE I+
Sbjct: 731 FHPERDDIY 739
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 173/334 (51%), Gaps = 18/334 (5%)
Query: 8 TWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACH-LHHFG----VGSARAFFD 62
T+ S++ A + + Q R++ + I N Y+ +L H L +G + AR FD
Sbjct: 69 TYISLICACSSSR-SLAQGRKIHDHILNSN-CKYDTILNNHILSMYGKCGSLRDAREVFD 126
Query: 63 RMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCV----SWSAMVSGYVACGDLDA 118
M ++ S+ ++I+GY+Q G EA L+ M +++ V ++ +++ + D+
Sbjct: 127 FMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGL 186
Query: 119 AVECFYAAPVR-----SVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYV 173
+ +A ++ +I A+I Y++F ++ A R+F + +K L++W+++IAG+
Sbjct: 187 GKQ-LHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFS 245
Query: 174 ENGRAEDGLKLFKSMLESGA-KPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDT 232
+ G + L K ML G PN S L CS+L G Q+H L KS L+ +
Sbjct: 246 QLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNA 305
Query: 233 TAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHD 292
AG SL MYA+CG L A +F QI R D SWN +I+G A +G ++A+ +F +MR
Sbjct: 306 IAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSS 365
Query: 293 GMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVR 326
G PD I+ ++L A + G+Q + +++
Sbjct: 366 GFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIK 399
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 183/439 (41%), Gaps = 90/439 (20%)
Query: 6 TVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHH-FGVGSARAFFDRM 64
T+ N ILS + K G+ AR++F+ +PE N VSY ++ + + G + R + +
Sbjct: 102 TILNNHILSMYGKC-GSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKML 160
Query: 65 E-------------VKDTAS-------------------------WNTMISGYAQVGLMG 86
+ +K AS N +I+ Y + M
Sbjct: 161 QEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMS 220
Query: 87 EASMLFAVMPEKNCVSWSAMVSGYV---------------------------------AC 113
+AS +F +P K+ +SWS++++G+ AC
Sbjct: 221 DASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKAC 280
Query: 114 GDL---DAAVE----CFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWN 166
L D + C + + I ++ Y + G + SA R+F ++ +WN
Sbjct: 281 SSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWN 340
Query: 167 AMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKS 226
+IAG NG A++ + +F M SG P+A+SL S+L + AL G Q+H + K
Sbjct: 341 VIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKW 400
Query: 227 PLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK-DIVSWNAMISGYAQHGAGEKALHL 285
+D T SL++MY C DL + LF D VSWN +++ QH + L L
Sbjct: 401 GFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRL 460
Query: 286 FDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKT--KPEHYA--CMV 341
F M +PD IT +L C + LG Q V + +KT PE + ++
Sbjct: 461 FKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQ-----VHCYSLKTGLAPEQFIKNGLI 515
Query: 342 DLLGRAGRLPEAVDLIKSM 360
D+ + G L +A + SM
Sbjct: 516 DMYAKCGSLGQARRIFDSM 534
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 283 bits (725), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 168/506 (33%), Positives = 260/506 (51%), Gaps = 62/506 (12%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLF-----EKIPEPNTVSYNIMLAC-HLHHFGV 54
MK + ++WN+++S + + +G A +F E + + +++ C HL +
Sbjct: 178 MKNRDVISWNTMISGYYR-NGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEM 236
Query: 55 G-------SARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMV 107
G + D++EVK N +++ Y + G M EA +F M ++ ++W+ M+
Sbjct: 237 GRNVHKLVEEKRLGDKIEVK-----NALVNMYLKCGRMDEARFVFDRMERRDVITWTCMI 291
Query: 108 SGYVACGDLDAAVE----------------------------------CFYAAPVRS--- 130
+GY GD++ A+E C + VR
Sbjct: 292 NGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVY 351
Query: 131 --VITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSM 188
+I T++I+ Y K RV+ R+F S W+A+IAG V+N D L LFK M
Sbjct: 352 SDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRM 411
Query: 189 LESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDL 248
+PN +L S+L + L+ L+ +H + K+ S A T L+ +Y+KCG L
Sbjct: 412 RREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTL 471
Query: 249 KEAWELFVQIPRK----DIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAV 304
+ A ++F I K D+V W A+ISGY HG G AL +F EM G+ P+ ITF +
Sbjct: 472 ESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSA 531
Query: 305 LLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKP 364
L AC+H+GLV+ G+ F M+ + + HY C+VDLLGRAGRL EA +LI ++PF+P
Sbjct: 532 LNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEP 591
Query: 365 HPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRR 424
++G LL AC H+N+ L E AA L EL+P + YV LAN+YAA RW+ + ++R
Sbjct: 592 TSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRS 651
Query: 425 SMKENKVVKAPGYSWIEISSEVHEFR 450
M+ + K PG+S IEI S + R
Sbjct: 652 MMENVGLRKKPGHSTIEIRSNSVDTR 677
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 153/307 (49%), Gaps = 21/307 (6%)
Query: 11 SILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTA 70
S LS G+ AR+LFE++P+ + +SYNI++ ++ A + F RM +
Sbjct: 53 STLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGV- 111
Query: 71 SWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPVRS 130
+ GY + A L +M G V G + + ++ R
Sbjct: 112 --KCVPDGYTYPFVAKAAGEL------------KSMKLGLVVHGRI---LRSWFG---RD 151
Query: 131 VITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLE 190
A++ YM FG+VE A +F M + +++WN MI+GY NG D L +F M+
Sbjct: 152 KYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVN 211
Query: 191 SGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKE 250
+ ++ S+L C +L L++G+ VH+LV + L +L++MY KCG + E
Sbjct: 212 ESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDE 271
Query: 251 AWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNH 310
A +F ++ R+D+++W MI+GY + G E AL L M+ +G++P+ +T +++ C
Sbjct: 272 ARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGD 331
Query: 311 AGLVDLG 317
A V+ G
Sbjct: 332 ALKVNDG 338
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 134/337 (39%), Positives = 200/337 (59%)
Query: 145 GRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVL 204
G +++A LFR + ++ L+ WNAMI+GYV+ G ++GL ++ M ++ P+ + SV
Sbjct: 157 GDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVF 216
Query: 205 LGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIV 264
CS L L+ GK+ H ++ K + S+ ++L+ MY KC + +F Q+ ++++
Sbjct: 217 RACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVI 276
Query: 265 SWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMM 324
+W ++ISGY HG + L F++M+ +G +P+ +TF+ VL ACNH GLVD G ++F M
Sbjct: 277 TWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSM 336
Query: 325 VRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDL 384
RD+GI+ + +HYA MVD LGRAGRL EA + + P K HP ++G+LLGACRIH N+ L
Sbjct: 337 KRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKL 396
Query: 385 AEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISS 444
E AA LELDP++ YV AN YA+ E +++RR M+ V K PGYS IE+
Sbjct: 397 LELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQG 456
Query: 445 EVHEFRSSDRLHPELASIHXXXXXXXXXXXXAGYVPD 481
EVH F D H I+ Y PD
Sbjct: 457 EVHRFMKDDTSHRLSEKIYKKVHEMTSFFMDIDYYPD 493
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 108/232 (46%), Gaps = 10/232 (4%)
Query: 56 SARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCV-SWSAMVSGYVACG 114
+A F ++++D WN MISGY Q GL E ++ M + V S + AC
Sbjct: 161 TAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACS 220
Query: 115 DLDAAVECFYAAPV-------RSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNA 167
LD A V ++I +A++ Y K R+F ++S + ++TW +
Sbjct: 221 ALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTS 280
Query: 168 MIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLG-KQVHQLVCKS 226
+I+GY +G+ + LK F+ M E G +PN ++ VL C++ + G + + +
Sbjct: 281 LISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDY 340
Query: 227 PLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVS-WNAMISGYAQHG 277
+ + +++ + G L+EA+E ++ P K+ W +++ HG
Sbjct: 341 GIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHG 392
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 3/161 (1%)
Query: 166 NAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCK 225
+ + G GR ++ + L S SG + + +L C GK++H +
Sbjct: 80 DKTLKGLCVTGRLKEAVGLLWS---SGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFV 136
Query: 226 SPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHL 285
+ + L+ +YA GDL+ A LF + +D++ WNAMISGY Q G ++ L +
Sbjct: 137 VGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFI 196
Query: 286 FDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVR 326
+ +MR + + PD TF +V AC+ ++ G + +M++
Sbjct: 197 YYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIK 237
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 280 bits (715), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 161/405 (39%), Positives = 241/405 (59%), Gaps = 12/405 (2%)
Query: 49 LHHFGV-GSAR---AFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMP-EKNCVSW 103
+H +GV G +R F M V+D SW +I+G+ + GL EA F+ M E N ++
Sbjct: 148 VHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMDVEPNLATY 207
Query: 104 SAMV--SGYVACGDLDAAVE--CFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSL 159
++ SG V C L + A + S+ T A+I Y+K ++ A R+F E+
Sbjct: 208 VCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEK 267
Query: 160 KTLVTWNAMIAGYVENGRAEDGLKLFKSM-LESGAKPNALSLTSVLLGCSNLSALQLGKQ 218
K V+WN+MI+G V R+++ + LF M SG KP+ LTSVL C++L A+ G+
Sbjct: 268 KDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRW 327
Query: 219 VHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGA 278
VH+ + + + DT GT+++ MYAKCG ++ A E+F I K++ +WNA++ G A HG
Sbjct: 328 VHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGH 387
Query: 279 GEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFN-MMVRDFGIKTKPEHY 337
G ++L F+EM G KP+ +TF+A L AC H GLVD G +YF+ M R++ + K EHY
Sbjct: 388 GLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHY 447
Query: 338 ACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNL-DLAEFAAKNLLELD 396
CM+DLL RAG L EA++L+K+MP KP I G +L AC+ L +L + + L+++
Sbjct: 448 GCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIE 507
Query: 397 PSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIE 441
+ YV L+N++AA RW+ VARIRR MK + K PG S+IE
Sbjct: 508 FEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 109/247 (44%), Gaps = 37/247 (14%)
Query: 164 TWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLV 223
++N +++ Y + + +K+ + +G P+ + V C S ++ GKQ+H +V
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIV 132
Query: 224 CKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKAL 283
K D SL+ Y CG+ + A ++F ++P +D+VSW +I+G+ + G ++AL
Sbjct: 133 TKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEAL 192
Query: 284 HLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMV------------------ 325
F +M ++P+ T+V VL++ G + LG +++
Sbjct: 193 DTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMY 249
Query: 326 ----------RDFGIKTKPEHYA--CMVDLLGRAGRLPEAVDLIKSMP----FKPHPAIF 369
R FG K + + M+ L R EA+DL M KP I
Sbjct: 250 VKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHIL 309
Query: 370 GTLLGAC 376
++L AC
Sbjct: 310 TSVLSAC 316
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 279 bits (714), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 152/444 (34%), Positives = 249/444 (56%), Gaps = 10/444 (2%)
Query: 3 VKSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFD 62
V S V S L + K G AR++F+++PE N ++N M+ ++ + A F+
Sbjct: 77 VCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFE 136
Query: 63 RMEV-KDTASWNTMISGYAQVGLMGEASMLFAVMP--EKNCVSWSAMVSGYVACGDLDAA 119
+ V ++T +W MI GY + + +A LF MP KN +WS M+ YV ++ A
Sbjct: 137 EISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDA 196
Query: 120 VECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAE 179
+ F P ++ W+ M++GY + G V A +F + + LV WN +IAGY +NG ++
Sbjct: 197 RKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSD 256
Query: 180 DGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLI 239
D + F +M G +P+A++++S+L C+ L +G++VH L+ + + +LI
Sbjct: 257 DAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALI 316
Query: 240 SMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWI 299
MYAKCGDL+ A +F I + + N+MIS A HG G++AL +F M +KPD I
Sbjct: 317 DMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEI 376
Query: 300 TFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKS 359
TF+AVL AC H G + G++ F+ M + +K +H+ C++ LLGR+G+L EA L+K
Sbjct: 377 TFIAVLTACVHGGFLMEGLKIFSEM-KTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKE 435
Query: 360 MPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQ-----LANVYAAQN 414
M KP+ + G LLGAC++H + ++AE K ++E S Y + ++N+YA
Sbjct: 436 MHVKPNDTVLGALLGACKVHMDTEMAEQVMK-IIETAGSITNSYSENHLASISNLYAHTE 494
Query: 415 RWEHVARIRRSMKENKVVKAPGYS 438
RW+ +R M++ + K+PG S
Sbjct: 495 RWQTAEALRVEMEKRGLEKSPGLS 518
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 50/88 (56%)
Query: 215 LGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYA 274
LGK +H K + SD G+SLISMY KCG + A ++F ++P +++ +WNAMI GY
Sbjct: 64 LGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYM 123
Query: 275 QHGAGEKALHLFDEMRHDGMKPDWITFV 302
+G A LF+E+ WI +
Sbjct: 124 SNGDAVLASGLFEEISVCRNTVTWIEMI 151
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 279 bits (714), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 153/436 (35%), Positives = 245/436 (56%), Gaps = 10/436 (2%)
Query: 8 TWNSILSAFAKKHGNFEQARQLFEKI---PE-PNTVSYNIMLACHLHHFGVGSARA---- 59
T NS++ A+A E A +F ++ P P+ S+ +L G R
Sbjct: 107 THNSVIRAYANS-STPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGL 165
Query: 60 FFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAA 119
F V D NT+++ Y + G A + MP ++ VSW++++S Y+ G +D A
Sbjct: 166 FIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEA 225
Query: 120 VECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAE 179
F R+V +W MI+GY G V+ A+ +F M ++ +V+WNAM+ Y G
Sbjct: 226 RALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYN 285
Query: 180 DGLKLFKSMLE-SGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSL 238
+ L++F ML+ S KP+ +L SVL C++L +L G+ VH + K + + T+L
Sbjct: 286 EVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATAL 345
Query: 239 ISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDW 298
+ MY+KCG + +A E+F ++D+ +WN++IS + HG G+ AL +F EM ++G KP+
Sbjct: 346 VDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNG 405
Query: 299 ITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIK 358
ITF+ VL ACNH G++D + F MM + ++ EHY CMVDLLGR G++ EA +L+
Sbjct: 406 ITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVN 465
Query: 359 SMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEH 418
+P + +LLGAC+ L+ AE A LLEL+ ++GY Q++N+YA+ RWE
Sbjct: 466 EIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEK 525
Query: 419 VARIRRSMKENKVVKA 434
V RR+M+ +V ++
Sbjct: 526 VIDGRRNMRAERVNRS 541
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 138/278 (49%), Gaps = 29/278 (10%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAF 60
M V+ V+WNS+LSA+ +K G ++AR LF+++ E N S+N M++ + V A+
Sbjct: 201 MPVRDAVSWNSLLSAYLEK-GLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEV 259
Query: 61 FDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSA--MVSGYVACGDLDA 118
FD M V+D SWN M++ YA VG E +F M + + +VS AC L +
Sbjct: 260 FDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGS 319
Query: 119 ----------------AVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTL 162
+E F A TA++ Y K G+++ A +FR S + +
Sbjct: 320 LSQGEWVHVYIDKHGIEIEGFLA---------TALVDMYSKCGKIDKALEVFRATSKRDV 370
Query: 163 VTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQL 222
TWN++I+ +G +D L++F M+ G KPN ++ VL C+++ L +++ ++
Sbjct: 371 STWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEM 430
Query: 223 VCKSPLSSDTTAGTS-LISMYAKCGDLKEAWELFVQIP 259
+ T ++ + + G ++EA EL +IP
Sbjct: 431 MSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIP 468
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 279 bits (713), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 156/447 (34%), Positives = 256/447 (57%), Gaps = 17/447 (3%)
Query: 30 FEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEAS 89
F ++P V N ++ + V + F M +D SWNTMIS + Q GL E
Sbjct: 348 FRELP---IVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGL 404
Query: 90 MLFAVMPEK----NCVSWSAMVSGYVACGDLDAAVECFYAAPVRSVITWTAM----ITGY 141
ML M ++ + ++ +A++S + + + +A +R I + M I Y
Sbjct: 405 MLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQT-HAFLIRQGIQFEGMNSYLIDMY 463
Query: 142 MKFGRVESAERLFREMSL--KTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALS 199
K G + +++LF + TWN+MI+GY +NG E +F+ MLE +PNA++
Sbjct: 464 SKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVT 523
Query: 200 LTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIP 259
+ S+L CS + ++ LGKQ+H + L + ++L+ MY+K G +K A ++F Q
Sbjct: 524 VASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTK 583
Query: 260 RKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQ 319
++ V++ MI GY QHG GE+A+ LF M+ G+KPD ITFVAVL AC+++GL+D G++
Sbjct: 584 ERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLK 643
Query: 320 YFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPA-IFGTLLGACRI 378
F M + I+ EHY C+ D+LGR GR+ EA + +K + + + A ++G+LLG+C++
Sbjct: 644 IFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKL 703
Query: 379 HKNLDLAEFAAKNLLELDP-SSATGY-VQLANVYAAQNRWEHVARIRRSMKENKVVKAPG 436
H L+LAE ++ L + D + +GY V L+N+YA + +W+ V ++RR M+E + K G
Sbjct: 704 HGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVG 763
Query: 437 YSWIEISSEVHEFRSSDRLHPELASIH 463
S IEI+ V+ F S D+ HP + I+
Sbjct: 764 RSGIEIAGYVNCFVSRDQEHPHSSEIY 790
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 185/407 (45%), Gaps = 53/407 (13%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQL-----FEKIPEPNT----------------- 38
M+ K+ V WN+++S + K N E RQ E P P +
Sbjct: 174 MRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKA 233
Query: 39 -VSYNIMLACHLHH----FGVGSA-------------RAFFDRMEVKDTASWNTMISGYA 80
V Y +ML + F V SA R FD ++ WNTMI Y
Sbjct: 234 NVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYV 293
Query: 81 QVGLMGEASMLF-AVMPEKNCVS------WSAMVSGYVACGDLDAAVECFYAAPVRS--V 131
Q + E+ LF + K VS +A + +L F + R +
Sbjct: 294 QNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPI 353
Query: 132 ITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLES 191
+ +++ Y + G V + +F M + +V+WN MI+ +V+NG ++GL L M +
Sbjct: 354 VIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 413
Query: 192 GAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEA 251
G K + +++T++L SNL ++GKQ H + + + + + LI MY+K G ++ +
Sbjct: 414 GFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGM-NSYLIDMYSKSGLIRIS 472
Query: 252 WELF--VQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACN 309
+LF +D +WN+MISGY Q+G EK +F +M ++P+ +T ++L AC+
Sbjct: 473 QKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACS 532
Query: 310 HAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDL 356
G VDLG Q +R + + + +VD+ +AG + A D+
Sbjct: 533 QIGSVDLGKQLHGFSIRQY-LDQNVFVASALVDMYSKAGAIKYAEDM 578
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 154/305 (50%), Gaps = 19/305 (6%)
Query: 58 RAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVM----PEKNCVSWSAMVSGYVAC 113
R FD M K+ +WNT+IS Y + G EA F +M + + VS+ +
Sbjct: 168 RKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSIS 227
Query: 114 GDLDAAVECFYA-------APVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWN 166
+ A FY V+ + ++ I+ Y + G +ES+ R+F + + WN
Sbjct: 228 RSIKKA-NVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWN 286
Query: 167 AMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQ---LGKQVHQLV 223
MI YV+N + ++LF + G+K + LL S +SALQ LG+Q H V
Sbjct: 287 TMIGVYVQNDCLVESIELFLEAI--GSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFV 344
Query: 224 CKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKAL 283
K+ SL+ MY++CG + +++ +F+ + +D+VSWN MIS + Q+G ++ L
Sbjct: 345 SKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGL 404
Query: 284 HLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDL 343
L EM+ G K D+IT A+L A ++ ++G Q ++R GI+ + + + ++D+
Sbjct: 405 MLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQ-GIQFEGMN-SYLIDM 462
Query: 344 LGRAG 348
++G
Sbjct: 463 YSKSG 467
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 147/339 (43%), Gaps = 52/339 (15%)
Query: 11 SILSAFAK--KHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKD 68
SI S +K + GN + ARQLF+ IP+P TV
Sbjct: 41 SIRSRLSKICQDGNPQLARQLFDAIPKPTTVL---------------------------- 72
Query: 69 TASWNTMISGYAQVGLMGEASMLFAVM----PEKNC--VSWSAMVSGYVACGDLDA--AV 120
WNT+I G+ L EA + ++ M P NC ++S+ + +L A AV
Sbjct: 73 ---WNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAV 129
Query: 121 ECFYAAPVR--SVITWTAMITGYMKFGRV------ESAERLFREMSLKTLVTWNAMIAGY 172
C ++ S + +++ Y+ + ++F M K +V WN +I+ Y
Sbjct: 130 HCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWY 189
Query: 173 VENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCK--SPLSS 230
V+ GR + + F M+ KP+ +S +V S +++ + L+ K
Sbjct: 190 VKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVK 249
Query: 231 DTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDE-M 289
D +S ISMYA+ GD++ + +F ++I WN MI Y Q+ +++ LF E +
Sbjct: 250 DLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAI 309
Query: 290 RHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDF 328
+ D +T++ A + V+LG Q+ + ++F
Sbjct: 310 GSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNF 348
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 146/336 (43%), Gaps = 58/336 (17%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIML-----ACHLHHFGVG 55
M+ + V+WN+++SAF + + E ++E + + Y + A +L + +G
Sbjct: 379 MRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIG 438
Query: 56 -SARAFFDRMEV---------------------------------KDTASWNTMISGYAQ 81
AF R + +D A+WN+MISGY Q
Sbjct: 439 KQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQ 498
Query: 82 VGLMGEASMLFAVMPEK----NCVSWSAMVSGYVACGDLDAAVECFYAAPVR-----SVI 132
G + ++F M E+ N V+ ++++ G +D + + +R +V
Sbjct: 499 NGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQ-LHGFSIRQYLDQNVF 557
Query: 133 TWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESG 192
+A++ Y K G ++ AE +F + + VT+ MI GY ++G E + LF SM ESG
Sbjct: 558 VASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESG 617
Query: 193 AKPNALSLTSVLLGCSNL----SALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDL 248
KP+A++ +VL CS L++ +++ ++ P S + M + G +
Sbjct: 618 IKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCC---ITDMLGRVGRV 674
Query: 249 KEAWELFVQIPRKDIVS--WNAMISGYAQHGAGEKA 282
EA+E + + ++ W +++ HG E A
Sbjct: 675 NEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELA 710
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 279 bits (713), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 160/405 (39%), Positives = 229/405 (56%), Gaps = 12/405 (2%)
Query: 54 VGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCV-SWSAMVSGYVA 112
VG AR FD + +DT SWN+MISGY++ G +A LF M E+ +VS A
Sbjct: 183 VGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGA 242
Query: 113 C---GDLDAAVECFYAAPVR----SVITWTAMITGYMKFGRVESAERLFREMSLKTLVTW 165
C GDL A + S + +I+ Y K G ++SA R+F +M K V W
Sbjct: 243 CSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAW 302
Query: 166 NAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCK 225
AMI Y +NG++ + KLF M ++G P+A +L++VL C ++ AL+LGKQ+ +
Sbjct: 303 TAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASE 362
Query: 226 SPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHL 285
L + T L+ MY KCG ++EA +F +P K+ +WNAMI+ YA G ++AL L
Sbjct: 363 LSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLL 422
Query: 286 FDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLG 345
FD M + P ITF+ VL AC HAGLV G +YF+ M FG+ K EHY ++DLL
Sbjct: 423 FDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLS 479
Query: 346 RAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLEL-DPSSATGYV 404
RAG L EA + ++ P KP + +LGAC K++ + E A + L+E+ + +A YV
Sbjct: 480 RAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYV 539
Query: 405 QLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEF 449
+NV A W+ A++R M++ VVK PG SWIEI E+ EF
Sbjct: 540 ISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEF 584
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/353 (32%), Positives = 177/353 (50%), Gaps = 25/353 (7%)
Query: 25 QARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGL 84
QA+ L + +PN + I A L F S F E + S+N MI G
Sbjct: 57 QAQMLLHSVEKPN---FLIPKAVELGDFNYSSF--LFSVTEEPNHYSFNYMIRGLTNTWN 111
Query: 85 MGEASM-LFAVM------PEKNCVSWSAMVSGYVACGDLDAA-------VECFYAAPVRS 130
EA++ L+ M P+K ++ ++AC L+ F R
Sbjct: 112 DHEAALSLYRRMKFSGLKPDKFTYNFV-----FIACAKLEEIGVGRSVHSSLFKVGLERD 166
Query: 131 VITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLE 190
V ++I Y K G+V A +LF E++ + V+WN+MI+GY E G A+D + LF+ M E
Sbjct: 167 VHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEE 226
Query: 191 SGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKE 250
G +P+ +L S+L CS+L L+ G+ + ++ + T G+ LISMY KCGDL
Sbjct: 227 EGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDS 286
Query: 251 AWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNH 310
A +F Q+ +KD V+W AMI+ Y+Q+G +A LF EM G+ PD T VL AC
Sbjct: 287 ARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGS 346
Query: 311 AGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFK 363
G ++LG Q + ++ +VD+ G+ GR+ EA+ + ++MP K
Sbjct: 347 VGALELGKQ-IETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVK 398
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 151/355 (42%), Gaps = 58/355 (16%)
Query: 4 KSTVTWNSILSAFAKKHGNFEQARQLFEKIP----EPNTVSYNIML-AC-HLHHFGVG-- 55
+ TV+WNS++S +++ G + A LF K+ EP+ + ML AC HL G
Sbjct: 196 RDTVSWNSMISGYSEA-GYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRL 254
Query: 56 -------------------------------SARAFFDRMEVKDTASWNTMISGYAQVGL 84
SAR F++M KD +W MI+ Y+Q G
Sbjct: 255 LEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGK 314
Query: 85 MGEASMLF------AVMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPV---RSVITWT 135
EA LF V P+ +S G V +L +E +A+ + ++ T
Sbjct: 315 SSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIET-HASELSLQHNIYVAT 373
Query: 136 AMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKP 195
++ Y K GRVE A R+F M +K TWNAMI Y G A++ L LF M P
Sbjct: 374 GLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPP 430
Query: 196 NALSLTSVLLGCSNLSALQLG-KQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWEL 254
+ ++ VL C + + G + H++ L T++I + ++ G L EAWE
Sbjct: 431 SDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEF 490
Query: 255 FVQIPRK-DIVSWNAMISGYAQH---GAGEKALHLFDEMRHDGMKPDWITFVAVL 305
+ P K D + A++ + EKA+ + EM+ +++ VL
Sbjct: 491 MERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVL 545
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 278 bits (711), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 151/424 (35%), Positives = 242/424 (57%), Gaps = 15/424 (3%)
Query: 54 VGSARAFFDRM-EVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCV----SWSAMVS 108
V A+ FD + + D+ WN +++GY+Q+ +A ++F+ M E+ + ++++S
Sbjct: 211 VEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLS 270
Query: 109 GYVACGDLDAAVECFYAAPVRS-----VITWTAMITGYMKFGRVESAERLFREMSLKTLV 163
+ GD+D + V++ ++ A+I Y K +E A +F M + L
Sbjct: 271 AFTVSGDIDNG-RSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLF 329
Query: 164 TWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLV 223
TWN+++ + G + L LF+ ML SG +P+ ++LT+VL C L++L+ G+++H +
Sbjct: 330 TWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYM 389
Query: 224 CKSPL----SSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAG 279
S L SS+ SL+ MY KCGDL++A +F + KD SWN MI+GY G
Sbjct: 390 IVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCG 449
Query: 280 EKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYAC 339
E AL +F M G+KPD ITFV +L AC+H+G ++ G + M + I +HYAC
Sbjct: 450 ELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYAC 509
Query: 340 MVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSS 399
++D+LGRA +L EA +L S P +P ++ ++L +CR+H N DLA A K L EL+P
Sbjct: 510 VIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEH 569
Query: 400 ATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPEL 459
GYV ++NVY ++E V +R +M++ V K PG SWI + + VH F + ++ HPE
Sbjct: 570 CGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEF 629
Query: 460 ASIH 463
SIH
Sbjct: 630 KSIH 633
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 122/227 (53%), Gaps = 4/227 (1%)
Query: 135 TAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAK 194
T+++ Y K G + A +F S + + +NA+I+G+V NG D ++ ++ M +G
Sbjct: 100 TSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGIL 158
Query: 195 PNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWEL 254
P+ + S+L G S+ L K+VH L K SD G+ L++ Y+K +++A ++
Sbjct: 159 PDKYTFPSLLKG-SDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKV 217
Query: 255 FVQIP-RKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGL 313
F ++P R D V WNA+++GY+Q E AL +F +MR +G+ T +VL A +G
Sbjct: 218 FDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGD 277
Query: 314 VDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSM 360
+D G + V+ G + ++D+ G++ L EA + ++M
Sbjct: 278 IDNGRSIHGLAVKT-GSGSDIVVSNALIDMYGKSKWLEEANSIFEAM 323
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 2/122 (1%)
Query: 196 NALSLTSVLLGCSNLSALQLGKQVHQ-LVCKSPLSSDTTAGTSLISMYAKCGDLKEAWEL 254
N + + L C+ G+Q+H +V K L AGTSL++MYAKCG ++ A +
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 255 FVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLV 314
F R D+ +NA+ISG+ +G+ A+ + EMR +G+ PD TF ++L + L
Sbjct: 119 FGGSER-DVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELS 177
Query: 315 DL 316
D+
Sbjct: 178 DV 179
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 157/479 (32%), Positives = 252/479 (52%), Gaps = 26/479 (5%)
Query: 3 VKSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFD 62
+ TVT + +L+ + A +F +I N +N ++ G +R+ F
Sbjct: 54 ISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIR--------GFSRSSFP 105
Query: 63 RMEVK--------------DTASWNTMISGYAQVGLMGEASMLFAVMP----EKNCVSWS 104
M + ++ ++ Y ++G + L ++ E + +
Sbjct: 106 EMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRN 165
Query: 105 AMVSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVT 164
M+ YV CG L A F V+ W +MI G+ K G ++ A+ LF EM + V+
Sbjct: 166 TMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVS 225
Query: 165 WNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVC 224
WN+MI+G+V NGR +D L +F+ M E KP+ ++ S+L C+ L A + G+ +H+ +
Sbjct: 226 WNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIV 285
Query: 225 KSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALH 284
++ ++ T+LI MY KCG ++E +F P+K + WN+MI G A +G E+A+
Sbjct: 286 RNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMD 345
Query: 285 LFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLL 344
LF E+ G++PD ++F+ VL AC H+G V ++F +M + I+ +HY MV++L
Sbjct: 346 LFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVL 405
Query: 345 GRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYV 404
G AG L EA LIK+MP + I+ +LL ACR N+++A+ AAK L +LDP GYV
Sbjct: 406 GGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYV 465
Query: 405 QLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIH 463
L+N YA+ +E R MKE ++ K G S IE+ EVHEF S HP+ A I+
Sbjct: 466 LLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGGTHPKSAEIY 524
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 116/271 (42%), Gaps = 24/271 (8%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLH---HFGVGSA 57
M ++ V+WNS++S F ++G F+ A +F ++ E + + L+ + G
Sbjct: 218 MPQRNGVSWNSMISGFV-RNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQ 276
Query: 58 RAFFDRMEVKDTASWNT-----MISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVA 112
+ V++ N+ +I Y + G + E +F P+K W++M+ G
Sbjct: 277 GRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLAN 336
Query: 113 CGDLDAAVECFYAAPVRSV----ITWTAMITGYMKFGRVESAERLFREMSLKTLVT---- 164
G + A++ F + +++ ++T G V A+ FR M K ++
Sbjct: 337 NGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIK 396
Query: 165 -WNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLV 223
+ M+ G E+ L K+M + + + +S+L C + +++ K+ +
Sbjct: 397 HYTLMVNVLGGAGLLEEAEALIKNM---PVEEDTVIWSSLLSACRKIGNVEMAKRAAK-- 451
Query: 224 CKSPLSSDTTAGTSLIS-MYAKCGDLKEAWE 253
C L D T G L+S YA G +EA E
Sbjct: 452 CLKKLDPDETCGYVLLSNAYASYGLFEEAVE 482
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 115/267 (43%), Gaps = 28/267 (10%)
Query: 187 SMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDT-TAGTSLISMYAKC 245
+M SG+ L + CS + L KQ+H + K+ L SDT TA L A
Sbjct: 15 AMPSSGSLSGNTYLRLIDTQCSTMREL---KQIHASLIKTGLISDTVTASRVLAFCCASP 71
Query: 246 GDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEM--RHDGMKPDWITFVA 303
D+ A+ +F +I K+ WN +I G+++ E A+ +F +M +KP +T+ +
Sbjct: 72 SDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPS 131
Query: 304 VLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFK 363
V A G G Q M++++ G++ M+ + G L EA
Sbjct: 132 VFKAYGRLGQARDGRQLHGMVIKE-GLEDDSFIRNTMLHMYVTCGCLIEAW--------- 181
Query: 364 PHPAIFGTLLGACRIHKNLDLAEFA-------AKNLL-ELDPSSATGYVQLANVYAAQNR 415
IF ++G + N + FA A+NL E+ + + + + + R
Sbjct: 182 ---RIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGR 238
Query: 416 WEHVARIRRSMKENKVVKAPGYSWIEI 442
++ + R M+E K VK G++ + +
Sbjct: 239 FKDALDMFREMQE-KDVKPDGFTMVSL 264
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 151/397 (38%), Positives = 224/397 (56%), Gaps = 12/397 (3%)
Query: 57 ARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVS------GY 110
AR FD K+ +W+ MI GY + ++ EA +F M + V+ V+ G
Sbjct: 259 ARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGC 318
Query: 111 VACGDLDAA--VECF--YAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWN 166
GDL V C+ A + + +I+ Y K+G + A R F E+ LK ++++N
Sbjct: 319 ARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYN 378
Query: 167 AMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKS 226
++I G V N R E+ +LF M SG +P+ +L VL CS+L+AL G H
Sbjct: 379 SLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVH 438
Query: 227 PLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLF 286
+ +T+ +L+ MY KCG L A +F + ++DIVSWN M+ G+ HG G++AL LF
Sbjct: 439 GYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLF 498
Query: 287 DEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVR-DFGIKTKPEHYACMVDLLG 345
+ M+ G+ PD +T +A+L AC+H+GLVD G Q FN M R DF + + +HY CM DLL
Sbjct: 499 NSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLA 558
Query: 346 RAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQ 405
RAG L EA D + MPF+P + GTLL AC +KN +L +K + L ++ + V
Sbjct: 559 RAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLGETTES-LVL 617
Query: 406 LANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEI 442
L+N Y+A RWE ARIR K+ ++K PGYSW+++
Sbjct: 618 LSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 154/312 (49%), Gaps = 14/312 (4%)
Query: 61 FDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVS--WSAMVSGYVACGDLDA 118
FD M +D +WN MISG++ + + LF M + +S S +V + A G A
Sbjct: 161 FDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGA 220
Query: 119 AVE-------CFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAG 171
E C ++ T ++ Y K + A R+F K VTW+AMI G
Sbjct: 221 LREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGG 280
Query: 172 YVENGRAEDGLKLFKSML--ESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLS 229
YVEN ++ ++F ML ++ A +++ +L+GC+ L G+ VH K+
Sbjct: 281 YVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFI 340
Query: 230 SDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEM 289
D T ++IS YAK G L +A+ F +I KD++S+N++I+G + E++ LF EM
Sbjct: 341 LDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEM 400
Query: 290 RHDGMKPDWITFVAVLLACNHAGLVDLGVQ-YFNMMVRDFGIKTKPEHYACMVDLLGRAG 348
R G++PD T + VL AC+H + G + +V + + T + ++D+ + G
Sbjct: 401 RTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICN--ALMDMYTKCG 458
Query: 349 RLPEAVDLIKSM 360
+L A + +M
Sbjct: 459 KLDVAKRVFDTM 470
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 96/175 (54%), Gaps = 3/175 (1%)
Query: 141 YMKFGRVESAERLFREMSLKTL--VTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNAL 198
Y VE A +F E+ + + W+ MI Y N AE L L+ ML SG +P
Sbjct: 45 YASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKY 104
Query: 199 SLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQI 258
+ VL C+ L A+ GK +H V S ++D T+L+ YAKCG+L+ A ++F ++
Sbjct: 105 TYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEM 164
Query: 259 PRKDIVSWNAMISGYAQHGAGEKALHLFDEMRH-DGMKPDWITFVAVLLACNHAG 312
P++D+V+WNAMISG++ H + LF +MR DG+ P+ T V + A AG
Sbjct: 165 PKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAG 219
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 128/288 (44%), Gaps = 28/288 (9%)
Query: 5 STVTWNSILSAFAKKHGNFEQARQLFEKIPEP--NTVSYNIMLACHLHHFGVGSARAFFD 62
STV N L+ E AR +F++IP P N +++++M+ + + A +
Sbjct: 35 STVLVN--LTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYY 92
Query: 63 RMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVEC 122
+M + + Y ++ + L A+ K ++ +V C D
Sbjct: 93 KM-----LNSGVRPTKYTYPFVLKACAGLRAIDDGK-------LIHSHVNCSDF------ 134
Query: 123 FYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGL 182
+ TA++ Y K G +E A ++F EM + +V WNAMI+G+ + D +
Sbjct: 135 -----ATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVI 189
Query: 183 KLFKSMLE-SGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISM 241
LF M G PN ++ + AL+ GK VH + S+D T ++ +
Sbjct: 190 GLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDV 249
Query: 242 YAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEM 289
YAK + A +F +K+ V+W+AMI GY ++ ++A +F +M
Sbjct: 250 YAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQM 297
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 86/166 (51%), Gaps = 10/166 (6%)
Query: 202 SVLLGCSNLSALQLGKQVHQLVCKSPLS-SDTTAGTSLISMYAKCGDLKEAWELFVQI-- 258
S+L C L LG+ +HQ + K L+ S +T +L +YA C +++ A +F +I
Sbjct: 4 SLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPH 63
Query: 259 PRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLG- 317
PR + ++W+ MI YA + EKAL L+ +M + G++P T+ VL AC +D G
Sbjct: 64 PRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGK 123
Query: 318 VQYFNMMVRDFGIKTKPEHYAC--MVDLLGRAGRLPEAVDLIKSMP 361
+ + ++ DF + Y C +VD + G L A+ + MP
Sbjct: 124 LIHSHVNCSDFA----TDMYVCTALVDFYAKCGELEMAIKVFDEMP 165
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 119/253 (47%), Gaps = 28/253 (11%)
Query: 10 NSILSAFAKKHGNFEQARQLFEKIPEPNTVSYN-IMLACHLHHFGVGSARAFFDRMEVKD 68
N+I+S +AK +G+ A + F +I + +SYN ++ C ++ S R F +
Sbjct: 347 NTIISFYAK-YGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGI 405
Query: 69 TASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPV 128
T++ G++ S L A+ +C + +V GY V
Sbjct: 406 RPDITTLL------GVLTACSHLAALGHGSSCHGY-CVVHGY----------------AV 442
Query: 129 RSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSM 188
+ I A++ Y K G+++ A+R+F M + +V+WN M+ G+ +G ++ L LF SM
Sbjct: 443 NTSIC-NALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSM 501
Query: 189 LESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLS--SDTTAGTSLISMYAKCG 246
E+G P+ ++L ++L CS+ + GKQ+ + + + + + A+ G
Sbjct: 502 QETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAG 561
Query: 247 DLKEAWELFVQIP 259
L EA++ ++P
Sbjct: 562 YLDEAYDFVNKMP 574
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 161/475 (33%), Positives = 248/475 (52%), Gaps = 20/475 (4%)
Query: 4 KSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDR 63
++ VTW S+L A+ FE A +F ++P+ ++NIM++ H H + S + F
Sbjct: 136 RNEVTWCSLLFAYMNAE-QFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKE 194
Query: 64 M---EVK-DTASWNTMISG-YAQVGLMGEASMLFAVMPEKNCVSWSAMV-------SGYV 111
M E K D +++++++ A + M+ AVM + WS+ V S Y
Sbjct: 195 MLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNG---WSSAVEAKNSVLSFYT 251
Query: 112 ACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAG 171
G D A+ + V + ++W ++I MK G E A +F K +VTW MI G
Sbjct: 252 KLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITG 311
Query: 172 YVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSD 231
Y NG E L+ F M++SG + + +VL CS L+ L GK +H +
Sbjct: 312 YGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGY 371
Query: 232 TTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRH 291
G +L+++YAKCGD+KEA F I KD+VSWN M+ + HG ++AL L+D M
Sbjct: 372 AYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIA 431
Query: 292 DGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLP 351
G+KPD +TF+ +L C+H+GLV+ G F MV+D+ I + +H CM+D+ GR G L
Sbjct: 432 SGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLA 491
Query: 352 EAVDLIKS----MPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLA 407
EA DL + + + + + TLLGAC H + +L +K L +PS +V L+
Sbjct: 492 EAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLS 551
Query: 408 NVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASI 462
N+Y + RW+ +RR M E + K PG SWIE+ ++V F D HP L +
Sbjct: 552 NLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEEL 606
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 114/385 (29%), Positives = 181/385 (47%), Gaps = 59/385 (15%)
Query: 19 KHGNFEQARQLFEKIPEPNTVSYNIMLACH----LHHFGVGSARAFFDRMEVKDTA---- 70
K G ARQ+F+ +PE +TV++N ML + LH A A F ++ D
Sbjct: 16 KSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQ----EAIALFTQLRFSDAKPDDY 71
Query: 71 SWNTMISGYAQVGLMGEASMLFA-VMPEKNCVSW---SAMVSGYVACGDLDAAVECF--Y 124
S+ ++S A +G + + + V+ C S ++++ Y C D +A + F
Sbjct: 72 SFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDM 131
Query: 125 AAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKL 184
R+ +TW +++ YM + E+A +F EM + WN MI+G+ G+ E L L
Sbjct: 132 CCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSL 191
Query: 185 FKSMLESGAKPNALSLTSVLLGCS-NLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYA 243
FK MLES KP+ + +S++ CS + S + G+ VH ++ K+ SS A S++S Y
Sbjct: 192 FKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYT 251
Query: 244 -------------------------------KCGDLKEAWELFVQIPRKDIVSWNAMISG 272
K G+ ++A E+F P K+IV+W MI+G
Sbjct: 252 KLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITG 311
Query: 273 YAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKT 332
Y ++G GE+AL F EM G+ D + AVL AC +GL LG M+ I
Sbjct: 312 YGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHAC--SGLALLG---HGKMIHGCLIHC 366
Query: 333 KPEHYA----CMVDLLGRAGRLPEA 353
+ YA +V+L + G + EA
Sbjct: 367 GFQGYAYVGNALVNLYAKCGDIKEA 391
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 99/212 (46%), Gaps = 33/212 (15%)
Query: 131 VITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLE 190
++ T+ I K GR+ SA ++F M V WN M+ Y G ++ + LF +
Sbjct: 4 LVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRF 63
Query: 191 SGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGD--- 247
S AKP+ S T++L C++L ++ G+++ LV +S + SLI MY KC D
Sbjct: 64 SDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLS 123
Query: 248 ------------------------------LKEAWELFVQIPRKDIVSWNAMISGYAQHG 277
+ A ++FV++P++ +WN MISG+A G
Sbjct: 124 ANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCG 183
Query: 278 AGEKALHLFDEMRHDGMKPDWITFVAVLLACN 309
E L LF EM KPD TF +++ AC+
Sbjct: 184 KLESCLSLFKEMLESEFKPDCYTFSSLMNACS 215
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 127/296 (42%), Gaps = 58/296 (19%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAF 60
++V + V+WNSI+ A K G E+A ++F PE N V
Sbjct: 266 IEVLTQVSWNSIIDA-CMKIGETEKALEVFHLAPEKNIV--------------------- 303
Query: 61 FDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYV--ACGDL-- 116
+W TMI+GY + G GE ++ F V K+ V G V AC L
Sbjct: 304 ----------TWTTMITGYGRNG-DGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLAL 352
Query: 117 --------DAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAM 168
+ C + A++ Y K G ++ A+R F +++ K LV+WN M
Sbjct: 353 LGHGKMIHGCLIHCGFQG---YAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTM 409
Query: 169 IAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKS-- 226
+ + +G A+ LKL+ +M+ SG KP+ ++ +L CS+ ++ G + + + K
Sbjct: 410 LFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYR 469
Query: 227 -PLSSDTTAGTSLISMYAKCGDLKEAWELFVQ-----IPRKDIVSWNAMISGYAQH 276
PL D T +I M+ + G L EA +L + SW ++ + H
Sbjct: 470 IPLEVDHV--TCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTH 523
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 275 bits (704), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 140/327 (42%), Positives = 208/327 (63%), Gaps = 2/327 (0%)
Query: 128 VRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKS 187
+ V ++++ Y G VE+A ++F EM + +V+W AMI+G+ + R + LKL+
Sbjct: 152 ISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSK 211
Query: 188 MLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGD 247
M +S + PN + T++L C+ AL G+ VH L S SLISMY KCGD
Sbjct: 212 MRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGD 271
Query: 248 LKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMR-HDGMKPDWITFVAVLL 306
LK+A+ +F Q KD+VSWN+MI+GYAQHG +A+ LF+ M G KPD IT++ VL
Sbjct: 272 LKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLS 331
Query: 307 ACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHP 366
+C HAGLV G ++FN+M + G+K + HY+C+VDLLGR G L EA++LI++MP KP+
Sbjct: 332 SCRHAGLVKEGRKFFNLMA-EHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNS 390
Query: 367 AIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSM 426
I+G+LL +CR+H ++ AA+ L L+P A +VQLAN+YA+ W+ A +R+ M
Sbjct: 391 VIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLM 450
Query: 427 KENKVVKAPGYSWIEISSEVHEFRSSD 453
K+ + PG SWIEI++ V F++ D
Sbjct: 451 KDKGLKTNPGCSWIEINNYVFMFKAED 477
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 146/319 (45%), Gaps = 61/319 (19%)
Query: 66 VKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYA 125
+ D ++++ Y G + A +F MPE+N VSW+AM+SG+ +D ++ Y+
Sbjct: 152 ISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLK-LYS 210
Query: 126 APVRSV-----ITWTAMITG-----------------------------------YMKFG 145
+S T+TA+++ Y K G
Sbjct: 211 KMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCG 270
Query: 146 RVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSML-ESGAKPNALSLTSVL 204
++ A R+F + S K +V+WN+MIAGY ++G A ++LF+ M+ +SG KP+A++ VL
Sbjct: 271 DLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVL 330
Query: 205 LGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK-DI 263
C + ++ G++ L+ + L + + L+ + + G L+EA EL +P K +
Sbjct: 331 SSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNS 390
Query: 264 VSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDL--GVQYF 321
V W +++ HG + +E ++PD A H L +L V Y+
Sbjct: 391 VIWGSLLFSCRVHGDVWTGIRAAEERLM--LEPD--------CAATHVQLANLYASVGYW 440
Query: 322 N------MMVRDFGIKTKP 334
+++D G+KT P
Sbjct: 441 KEAATVRKLMKDKGLKTNP 459
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 86/177 (48%), Gaps = 1/177 (0%)
Query: 187 SMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCG 246
S+ G +A L+S + C + G H L K SD G+SL+ +Y G
Sbjct: 110 SVKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSG 169
Query: 247 DLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLL 306
+++ A+++F ++P +++VSW AMISG+AQ + L L+ +MR P+ TF A+L
Sbjct: 170 EVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLS 229
Query: 307 ACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFK 363
AC +G + G + + G+K+ ++ + + G L +A + K
Sbjct: 230 ACTGSGALGQG-RSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNK 285
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 122/269 (45%), Gaps = 24/269 (8%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKI----PEPNTVSYNIMLACHLHHFGVGS 56
M ++ V+W +++S FA++ + +L+ K+ +PN ++ +L+ +G
Sbjct: 181 MPERNVVSWTAMISGFAQEW-RVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQ 239
Query: 57 ARAFFDRMEVKDTASW----NTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVA 112
R+ + S+ N++IS Y + G + +A +F K+ VSW++M++GY
Sbjct: 240 GRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQ 299
Query: 113 CGDLDAAVECFYAAPVRS-----VITWTAMITGYMKFGRVESAERLFREMS---LK-TLV 163
G A+E F +S IT+ +++ G V+ + F M+ LK L
Sbjct: 300 HGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELN 359
Query: 164 TWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLV 223
++ ++ G ++ L+L ++M KPN++ S+L C + G + +
Sbjct: 360 HYSCLVDLLGRFGLLQEALELIENM---PMKPNSVIWGSLLFSCRVHGDVWTGIRAAEE- 415
Query: 224 CKSPLSSDTTAG-TSLISMYAKCGDLKEA 251
+ L D A L ++YA G KEA
Sbjct: 416 -RLMLEPDCAATHVQLANLYASVGYWKEA 443
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 275 bits (703), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 173/523 (33%), Positives = 269/523 (51%), Gaps = 71/523 (13%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLF------EKIPEPNTVSYNIMLACH------ 48
M + TWN++LS F + G+ ++A LF E P+ TV I A
Sbjct: 113 MPERDATTWNAMLSGFCQS-GHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKL 171
Query: 49 ---LHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMP--EKNCVSW 103
+H G+ ++V+ T + NT IS Y + G + A ++F + ++ VSW
Sbjct: 172 LEAMHAVGIRLG------VDVQVTVA-NTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSW 224
Query: 104 SAMVSGYVACGD-----------------------LDAAVEC----------------FY 124
++M Y G+ ++ A C +
Sbjct: 225 NSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIH 284
Query: 125 AAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKL 184
+ + I+ Y K SA LF M+ +T V+W MI+GY E G ++ L L
Sbjct: 285 LGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALAL 344
Query: 185 FKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLV----CKSPLSSDTTAGTSLIS 240
F +M++SG KP+ ++L S++ GC +L+ GK + CK + +LI
Sbjct: 345 FHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKR---DNVMICNALID 401
Query: 241 MYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWIT 300
MY+KCG + EA ++F P K +V+W MI+GYA +G +AL LF +M KP+ IT
Sbjct: 402 MYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHIT 461
Query: 301 FVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSM 360
F+AVL AC H+G ++ G +YF++M + + I +HY+CMVDLLGR G+L EA++LI++M
Sbjct: 462 FLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNM 521
Query: 361 PFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVA 420
KP I+G LL AC+IH+N+ +AE AA++L L+P A YV++AN+YAA W+ A
Sbjct: 522 SAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFA 581
Query: 421 RIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIH 463
RIR MK+ + K PG S I+++ + H F + H E I+
Sbjct: 582 RIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIY 624
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 155/338 (45%), Gaps = 18/338 (5%)
Query: 38 TVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPE 97
T + ++ + C+ V A F+RM +D +WN M+SG+ Q G +A LF M
Sbjct: 91 TATVDMFVKCN----SVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRL 146
Query: 98 KNCVSWSAMVSGYVACGDLDAA---VECFYAAPVR-----SVITWTAMITGYMKFGRVES 149
S V + + + +E +A +R V I+ Y K G ++S
Sbjct: 147 NEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDS 206
Query: 150 AERLFREMSL--KTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGC 207
A+ +F + +T+V+WN+M Y G A D L+ ML KP+ + ++ C
Sbjct: 207 AKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASC 266
Query: 208 SNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWN 267
N L G+ +H D A + ISMY+K D A LF + + VSW
Sbjct: 267 QNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWT 326
Query: 268 AMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRD 327
MISGYA+ G ++AL LF M G KPD +T ++++ C G ++ G ++ +
Sbjct: 327 VMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETG-KWIDARADI 385
Query: 328 FGIKTKPEHYAC--MVDLLGRAGRLPEAVDLIKSMPFK 363
+G K + C ++D+ + G + EA D+ + P K
Sbjct: 386 YGCK-RDNVMICNALIDMYSKCGSIHEARDIFDNTPEK 422
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 90/179 (50%), Gaps = 11/179 (6%)
Query: 152 RLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLS 211
RL+R L ++ WN I V + L LF+ M G +PN + V C+ L+
Sbjct: 7 RLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLA 66
Query: 212 ALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMIS 271
+ + VH + KSP SD GT+ + M+ KC + A ++F ++P +D +WNAM+S
Sbjct: 67 DVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLS 126
Query: 272 GYAQHGAGEKALHLFDEMRHDGMKPDWITFVAV-----------LLACNHAGLVDLGVQ 319
G+ Q G +KA LF EMR + + PD +T + + LL HA + LGV
Sbjct: 127 GFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVD 185
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 94/182 (51%), Gaps = 2/182 (1%)
Query: 131 VITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLE 190
V TA + ++K V+ A ++F M + TWNAM++G+ ++G + LF+ M
Sbjct: 87 VFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRL 146
Query: 191 SGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKE 250
+ P+++++ +++ S +L+L + +H + + + T + IS Y KCGDL
Sbjct: 147 NEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDS 206
Query: 251 AWELFVQIPRKD--IVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLAC 308
A +F I R D +VSWN+M Y+ G A L+ M + KPD TF+ + +C
Sbjct: 207 AKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASC 266
Query: 309 NH 310
+
Sbjct: 267 QN 268
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 275 bits (702), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 165/484 (34%), Positives = 256/484 (52%), Gaps = 47/484 (9%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQA----RQLFEKIPEPNTVSYNIMLACHLHHFGVGS 56
MK KSTV+WN+++ A+++ G E+A + +FEK E + V+ +L+ H+ H +
Sbjct: 212 MKDKSTVSWNTMIGAYSQS-GLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPLHC 270
Query: 57 ARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDL 116
V D + +++ Y++ G + A L+A + + V +++VS Y GD+
Sbjct: 271 LVVKCGM--VNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDM 328
Query: 117 DAAVECF----------------------------------YAAPVRS-----VITWTAM 137
D AV F + ++S + +
Sbjct: 329 DIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGL 388
Query: 138 ITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLF-KSMLESGAKPN 196
IT Y KF VE+ LF ++ L++WN++I+G V++GRA ++F + ML G P+
Sbjct: 389 ITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPD 448
Query: 197 ALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFV 256
A+++ S+L GCS L L LGK++H ++ ++ T+LI MYAKCG+ +A +F
Sbjct: 449 AITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFK 508
Query: 257 QIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDL 316
I +WN+MISGY+ G +AL + EMR G+KPD ITF+ VL ACNH G VD
Sbjct: 509 SIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDE 568
Query: 317 GVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGAC 376
G F M+++FGI +HYA MV LLGRA EA+ LI M KP A++G LL AC
Sbjct: 569 GKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSAC 628
Query: 377 RIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPG 436
IH+ L++ E+ A+ + LD + YV ++N+YA + W+ V R+R MK+N G
Sbjct: 629 IIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLG 688
Query: 437 YSWI 440
S I
Sbjct: 689 VSQI 692
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 164/328 (50%), Gaps = 15/328 (4%)
Query: 54 VGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNC----VSWSAMVSG 109
+GSA F M+ K T SWNTMI Y+Q GL EA +F M EKN V+ ++S
Sbjct: 202 LGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSA 261
Query: 110 YVACGDLDA-AVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAM 168
+V+ L V+C V + T+++ Y + G + SAERL+ ++V ++
Sbjct: 262 HVSHEPLHCLVVKC---GMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSI 318
Query: 169 IAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPL 228
++ Y E G + + F + K +A++L +L GC S + +G +H KS L
Sbjct: 319 VSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGL 378
Query: 229 SSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDE 288
+ T LI+MY+K D++ LF Q+ ++SWN++ISG Q G A +F +
Sbjct: 379 CTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQ 438
Query: 289 MR-HDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYAC--MVDLLG 345
M G+ PD IT ++L C+ ++LG + +R+ + E++ C ++D+
Sbjct: 439 MMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRN---NFENENFVCTALIDMYA 495
Query: 346 RAGRLPEAVDLIKSMPFKPHPAIFGTLL 373
+ G +A + KS+ P A + +++
Sbjct: 496 KCGNEVQAESVFKSIK-APCTATWNSMI 522
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 151/304 (49%), Gaps = 27/304 (8%)
Query: 44 MLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKN-CVS 102
+L +L V SA+ FD M +DT WN +I GY++ G +A LF VM ++ S
Sbjct: 91 LLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPS 150
Query: 103 WSAMVSGYVACGDLDAAVECFYAAPVRSV-------------ITWTAMITGYMKFGRVES 149
+ +V+ CG +C + + RSV A+I+ Y K + S
Sbjct: 151 ATTLVNLLPFCG------QCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGS 204
Query: 150 AERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSN 209
AE LFREM K+ V+WN MI Y ++G E+ + +FK+M E + + +++ ++
Sbjct: 205 AEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINL------ 258
Query: 210 LSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAM 269
LSA + +H LV K + +D + TSL+ Y++CG L A L+ + IV ++
Sbjct: 259 LSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSI 318
Query: 270 ISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFG 329
+S YA+ G + A+ F + R MK D + V +L C + +D+G+ ++ G
Sbjct: 319 VSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKS-G 377
Query: 330 IKTK 333
+ TK
Sbjct: 378 LCTK 381
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 98/179 (54%)
Query: 129 RSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSM 188
R V T+++ Y+K G V SA+ LF EM + V WNA+I GY NG D KLF M
Sbjct: 83 RFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVM 142
Query: 189 LESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDL 248
L+ G P+A +L ++L C + G+ VH + KS L D+ +LIS Y+KC +L
Sbjct: 143 LQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAEL 202
Query: 249 KEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLA 307
A LF ++ K VSWN MI Y+Q G E+A+ +F M ++ +T + +L A
Sbjct: 203 GSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSA 261
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 105/233 (45%), Gaps = 11/233 (4%)
Query: 146 RVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLL 205
R+ L+R++S +++++ + + + +F+ +L S PN ++ S+ L
Sbjct: 2 RITKPITLYRDLSY-----FHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTM-SIFL 55
Query: 206 GCSNLSALQLGKQVHQL---VCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKD 262
+ S QV Q+ + KS L TSL+++Y K G + A LF ++P +D
Sbjct: 56 QATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERD 115
Query: 263 IVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFN 322
V WNA+I GY+++G A LF M G P T V +L C G V G
Sbjct: 116 TVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHG 175
Query: 323 MMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGA 375
+ + G++ + ++ + L A L + M K + + T++GA
Sbjct: 176 VAAKS-GLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVS-WNTMIGA 226
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 153/449 (34%), Positives = 249/449 (55%), Gaps = 16/449 (3%)
Query: 56 SARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPE----KNCVSWSAMVSGYV 111
S R FD M ++ + +ISG + L + LF++M N V++ +S
Sbjct: 208 SGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTY---LSALA 264
Query: 112 ACGDLDAAVE------CFYAAPVRS-VITWTAMITGYMKFGRVESAERLFREMSLKTLVT 164
AC VE + + S + +A++ Y K G +E A +F + V+
Sbjct: 265 ACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVS 324
Query: 165 WNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNL-SALQLGKQVHQLV 223
++ G +NG E+ ++ F ML++G + +A ++ S +LG S + ++L LGKQ+H LV
Sbjct: 325 MTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDA-NVVSAVLGVSFIDNSLGLGKQLHSLV 383
Query: 224 CKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKAL 283
K S +T LI+MY+KCGDL ++ +F ++P+++ VSWN+MI+ +A+HG G AL
Sbjct: 384 IKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAAL 443
Query: 284 HLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDL 343
L++EM +KP +TF+++L AC+H GL+D G + N M GI+ + EHY C++D+
Sbjct: 444 KLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDM 503
Query: 344 LGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGY 403
LGRAG L EA I S+P KP I+ LLGAC H + ++ E+AA+ L + P S++ +
Sbjct: 504 LGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAH 563
Query: 404 VQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIH 463
+ +AN+Y+++ +W+ A+ + MK V K G S IEI + H F D+LHP+ +I+
Sbjct: 564 ILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIY 623
Query: 464 XXXXXXXXXXXXAGYVPDLEFALHDVGEE 492
GY PD F L G++
Sbjct: 624 DVLSGLFPVMVDEGYRPDKRFILCYTGDD 652
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 184/401 (45%), Gaps = 37/401 (9%)
Query: 7 VTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEV 66
V WNS+LS +AK G A +LF+++P + +S NI+ L + S RM
Sbjct: 91 VVWNSLLSLYAKC-GKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLG 149
Query: 67 K---DTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECF 123
D A+ ++S M+ A+ A++SGY
Sbjct: 150 SGGFDHATLTIVLSVCDTPEFCLVTKMIHAL----------AILSGYD------------ 187
Query: 124 YAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLK 183
+ + +IT Y K G S +F MS + ++T A+I+G +EN EDGL+
Sbjct: 188 -----KEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLR 242
Query: 184 LFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYA 243
LF M PN+++ S L CS + G+Q+H L+ K + S+ ++L+ MY+
Sbjct: 243 LFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYS 302
Query: 244 KCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVA 303
KCG +++AW +F D VS ++ G AQ+G+ E+A+ F M G++ D A
Sbjct: 303 KCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSA 362
Query: 304 VLLACNHAGLVDLGVQYFNMMV-RDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPF 362
VL + LG Q ++++ R F T + ++++ + G L ++ + + MP
Sbjct: 363 VLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNN--GLINMYSKCGDLTDSQTVFRRMPK 420
Query: 363 KPHPAIFGTLLGACRIHKN--LDLAEFAAKNLLELDPSSAT 401
+ + + + +++ A H + L + LE+ P+ T
Sbjct: 421 RNYVS-WNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVT 460
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 121/230 (52%), Gaps = 2/230 (0%)
Query: 130 SVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSML 189
+++ W ++++ Y K G++ A +LF EM ++ +++ N + G++ N E G L K ML
Sbjct: 89 ALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRML 148
Query: 190 ESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLK 249
SG +A +LT VL C + K +H L S + + G LI+ Y KCG
Sbjct: 149 GSGGFDHA-TLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSV 207
Query: 250 EAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACN 309
+F + +++++ A+ISG ++ E L LF MR + P+ +T+++ L AC+
Sbjct: 208 SGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACS 267
Query: 310 HAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKS 359
+ + G Q + ++ +GI+++ + ++D+ + G + +A + +S
Sbjct: 268 GSQRIVEG-QQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFES 316
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 116/288 (40%), Gaps = 41/288 (14%)
Query: 3 VKSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFD 62
++S + S L K G+ E A +FE E + VS ++L + A FF
Sbjct: 287 IESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFI 346
Query: 63 RMEVKDTASWNTMISGYAQVGL----MGEASMLFAVMPEK----NCVSWSAMVSGYVACG 114
RM ++S V +G L +++ ++ N + +++ Y CG
Sbjct: 347 RMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCG 406
Query: 115 DLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVE 174
DL + F P R+ ++W +MI + + G +A +L+ EM
Sbjct: 407 DLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEM----------------- 449
Query: 175 NGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQ-VHQLVCKSPLSSDTT 233
+ LE KP ++ S+L CS++ + G++ ++++ + T
Sbjct: 450 ------------TTLE--VKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTE 495
Query: 234 AGTSLISMYAKCGDLKEAWELFVQIPRK-DIVSWNAMISGYAQHGAGE 280
T +I M + G LKEA +P K D W A++ + HG E
Sbjct: 496 HYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTE 543
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 274 bits (700), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 153/470 (32%), Positives = 244/470 (51%), Gaps = 38/470 (8%)
Query: 10 NSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDT 69
NS L K G+ A + E+I EP+ S + +++ + + V +R FDR +
Sbjct: 225 NSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCV 284
Query: 70 ASWNTMISGYAQVGLMGEASMLFAVMPEK------------------------------- 98
WN+MISGY + EA +LF M +
Sbjct: 285 ILWNSMISGYIANNMKMEALVLFNEMRNETREDSRTLAAVINACIGLGFLETGKQMHCHA 344
Query: 99 -------NCVSWSAMVSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAE 151
+ V S ++ Y CG A + F I +MI Y GR++ A+
Sbjct: 345 CKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAK 404
Query: 152 RLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLS 211
R+F + K+L++WN+M G+ +NG + L+ F M + + +SL+SV+ C+++S
Sbjct: 405 RVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASIS 464
Query: 212 ALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMIS 271
+L+LG+QV L SD +SLI +Y KCG ++ +F + + D V WN+MIS
Sbjct: 465 SLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMIS 524
Query: 272 GYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIK 331
GYA +G G +A+ LF +M G++P ITF+ VL ACN+ GLV+ G + F M D G
Sbjct: 525 GYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFV 584
Query: 332 TKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKN 391
EH++CMVDLL RAG + EA++L++ MPF +++ ++L C + + + AA+
Sbjct: 585 PDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEK 644
Query: 392 LLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIE 441
++EL+P ++ YVQL+ ++A WE A +R+ M+EN V K PG SW +
Sbjct: 645 IIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSSWTD 694
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/315 (32%), Positives = 161/315 (51%), Gaps = 36/315 (11%)
Query: 73 NTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPVRSVI 132
N ++ Y++ G MG A LF MP++N SW+ M+ GY+ G+ ++ F P R
Sbjct: 66 NHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGY 125
Query: 133 TWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESG 192
+W +++G+ K G + A RLF M K +VT N+++ GY+ NG AE+ L+LFK E
Sbjct: 126 SWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFK---ELN 182
Query: 193 AKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAW 252
+A++LT+VL C+ L AL+ GKQ+H + + D+ +SL+++YAKCGDL+ A
Sbjct: 183 FSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMAS 242
Query: 253 ELFVQIPRKD-------------------------------IVSWNAMISGYAQHGAGEK 281
+ QI D ++ WN+MISGY + +
Sbjct: 243 YMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKME 302
Query: 282 ALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMV 341
AL LF+EMR++ + D T AV+ AC G ++ G Q + FG+ + ++
Sbjct: 303 ALVLFNEMRNE-TREDSRTLAAVINACIGLGFLETGKQMHCHACK-FGLIDDIVVASTLL 360
Query: 342 DLLGRAGRLPEAVDL 356
D+ + G EA L
Sbjct: 361 DMYSKCGSPMEACKL 375
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/501 (23%), Positives = 205/501 (40%), Gaps = 133/501 (26%)
Query: 7 VTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEV 66
+ N +L +++ G AR LF+++P+ N S+N M+ +++ G++ FFD M
Sbjct: 63 IVANHLLQMYSRS-GKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPE 121
Query: 67 KDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECF--- 123
+D SWN ++SG+A+ G + A LF MPEK+ V+ ++++ GY+ G + A+ F
Sbjct: 122 RDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL 181
Query: 124 -YAAPVRSVITW--------------------------------TAMITGYMKFGRVESA 150
++A ++ T ++++ Y K G + A
Sbjct: 182 NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMA 241
Query: 151 ERLFREM------SLKTLVT-------------------------WNAMIAGYVENGRAE 179
+ ++ SL L++ WN+MI+GY+ N
Sbjct: 242 SYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKM 301
Query: 180 DGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLI 239
+ L LF M + + ++ +L +V+ C L L+ GKQ+H CK L D ++L+
Sbjct: 302 EALVLFNEM-RNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLL 360
Query: 240 SMYAKCGDLKEAWELFVQ-------------------------------IPRKDIVSWNA 268
MY+KCG EA +LF + I K ++SWN+
Sbjct: 361 DMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNS 420
Query: 269 MISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYF------- 321
M +G++Q+G + L F +M + D ++ +V+ AC ++LG Q F
Sbjct: 421 MTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVG 480
Query: 322 -----------------------NMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIK 358
V D +K+ + M+ G+ EA+DL K
Sbjct: 481 LDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFK 540
Query: 359 SMP---FKPHPAIFGTLLGAC 376
M +P F +L AC
Sbjct: 541 KMSVAGIRPTQITFMVVLTAC 561
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 77/179 (43%), Gaps = 18/179 (10%)
Query: 203 VLLGCSNLSALQLGKQVHQLVCKSP-LSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK 261
+L CS+ + L +Q + L+ K LSS L+ MY++ G + A LF ++P +
Sbjct: 32 LLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDR 91
Query: 262 DIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYF 321
+ SWN MI GY G +L FD M + D ++ V+ AG + + + F
Sbjct: 92 NYFSWNTMIEGYMNSGEKGTSLRFFDMMP----ERDGYSWNVVVSGFAKAGELSVARRLF 147
Query: 322 NMMVRDFGIKTKPEHYACMVDLLGRA----GRLPEAVDLIKSMPFKPHPAIFGTLLGAC 376
N M PE ++ L G EA+ L K + F T+L AC
Sbjct: 148 NAM---------PEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADAITLTTVLKAC 197
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 119/281 (42%), Gaps = 23/281 (8%)
Query: 4 KSTVTWNSILSAFAKKHGNFEQARQLFE----KIPEPNTVSYNIMLAC-HLHHFGVGS-- 56
KS ++WNS+ + F++ E + +P +++ AC + +G
Sbjct: 413 KSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQV 472
Query: 57 -ARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGD 115
ARA ++ S +++I Y + G + +F M + + V W++M+SGY G
Sbjct: 473 FARATIVGLDSDQVVS-SSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQ 531
Query: 116 LDAAVECFYAAPVRSV----ITWTAMITGYMKFGRVESAERLFREMSLKTLVT-----WN 166
A++ F V + IT+ ++T G VE +LF M + ++
Sbjct: 532 GFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFS 591
Query: 167 AMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKS 226
M+ G E+ + L + M + +S+L GC +GK+ + + +
Sbjct: 592 CMVDLLARAGYVEEAINLVEEM---PFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIEL 648
Query: 227 PLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWN 267
++ A L +++A GD E+ L ++ R++ V+ N
Sbjct: 649 E-PENSVAYVQLSAIFATSGDW-ESSALVRKLMRENNVTKN 687
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 151/468 (32%), Positives = 260/468 (55%), Gaps = 15/468 (3%)
Query: 9 WNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHH-FGVGSARAFFDRMEVK 67
WNS++ F + GNF A ++F ++P P+ S+N+M+ + F + + + +F +
Sbjct: 169 WNSLVK-FYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDG 227
Query: 68 DTASWNTMISGYAQVGLMGEASMLFAV---------MPEKNCVSWSAMVSGYVACGDLDA 118
T++S G + + + V + N + +A++ Y C +
Sbjct: 228 IEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGL 287
Query: 119 AVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRA 178
A F A + + +W M+ G+++ G +E+A+ +F +M + LV+WN+++ GY + G
Sbjct: 288 AKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCD 347
Query: 179 EDGLK-LFKSM-LESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGT 236
+ ++ LF M + KP+ +++ S++ G +N L G+ VH LV + L D +
Sbjct: 348 QRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSS 407
Query: 237 SLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKP 296
+LI MY KCG ++ A+ +F KD+ W +MI+G A HG G++AL LF M+ +G+ P
Sbjct: 408 ALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTP 467
Query: 297 DWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDL 356
+ +T +AVL AC+H+GLV+ G+ FN M FG + EHY +VDLL RAGR+ EA D+
Sbjct: 468 NNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDI 527
Query: 357 I-KSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNR 415
+ K MP +P +++G++L ACR ++++ AE A LL+L+P GYV L+N+YA R
Sbjct: 528 VQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGR 587
Query: 416 WEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRL-HPELASI 462
W + + R +M+ V K GYS + +H F ++++ HP I
Sbjct: 588 WGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQNHPRWTEI 635
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 80/158 (50%), Gaps = 6/158 (3%)
Query: 161 TLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVH 220
+ +N MI+ + + L+ SM+ P+ + ++ S LS + KQ+H
Sbjct: 99 NVFVYNTMISAV--SSSKNECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEV---KQIH 153
Query: 221 -QLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAG 279
++ LS SL+ Y + G+ A ++F ++P D+ S+N MI GYA+ G
Sbjct: 154 CHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFS 213
Query: 280 EKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLG 317
+AL L+ +M DG++PD T +++L+ C H + LG
Sbjct: 214 LEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLG 251
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 82/174 (47%), Gaps = 15/174 (8%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLF------EKIPEPNTVSYNIMLACHLHHFGV 54
M + V+WNS+L ++KK + R+LF EK+ +P+ V+ +++ ++ +
Sbjct: 326 MPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKV-KPDRVTMVSLISGAANNGEL 384
Query: 55 GSAR---AFFDRMEVKDTASWNT-MISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGY 110
R R+++K A ++ +I Y + G++ A M+F EK+ W++M++G
Sbjct: 385 SHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGL 444
Query: 111 VACGDLDAAVECFYAAPVRSV----ITWTAMITGYMKFGRVESAERLFREMSLK 160
G+ A++ F V +T A++T G VE +F M K
Sbjct: 445 AFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDK 498
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 271 bits (694), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 144/363 (39%), Positives = 215/363 (59%), Gaps = 7/363 (1%)
Query: 99 NCVSWSAMVSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMS 158
N SA+++ YV L A CF +V++ T +I+GY+K E A LFR M
Sbjct: 127 NVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMP 186
Query: 159 LKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAK-PNALSLTSVLLGCSNLSALQLGK 217
+++VTWNA+I G+ + GR E+ + F ML G PN + + SN+++ GK
Sbjct: 187 ERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGK 246
Query: 218 QVHQLVCKSPLSS-DTTAGTSLISMYAKCGDLKEAWELFVQIP--RKDIVSWNAMISGYA 274
+H K + SLIS Y+KCG+++++ F ++ +++IVSWN+MI GYA
Sbjct: 247 SIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYA 306
Query: 275 QHGAGEKALHLFDEMRHD-GMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKT- 332
+G GE+A+ +F++M D ++P+ +T + VL ACNHAGL+ G YFN V D+
Sbjct: 307 HNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNL 366
Query: 333 -KPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKN 391
+ EHYACMVD+L R+GR EA +LIKSMP P + LLG C+IH N LA+ AA
Sbjct: 367 LELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASK 426
Query: 392 LLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRS 451
+LELDP + YV L+N Y+A W++V+ IRR MKE + + G SWIE+ ++ F +
Sbjct: 427 ILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKETGLKRFTGCSWIEVRDQIRVFVN 486
Query: 452 SDR 454
+D+
Sbjct: 487 ADK 489
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 129/277 (46%), Gaps = 21/277 (7%)
Query: 19 KHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISG 78
K AR+ F+ +PN VS +++ +L A + F M + +WN +I G
Sbjct: 140 KLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGG 199
Query: 79 YAQVGLMGEASMLFAVMPEKNCV--SWSAMVSGYVACGDLDA--AVECFYAAPVR----- 129
++Q G EA F M + V + S A ++ + A + +A ++
Sbjct: 200 FSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKR 259
Query: 130 -SVITWTAMITGYMKFGRVESAERLFR--EMSLKTLVTWNAMIAGYVENGRAEDGLKLFK 186
+V W ++I+ Y K G +E + F E + +V+WN+MI GY NGR E+ + +F+
Sbjct: 260 FNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFE 319
Query: 187 SML-ESGAKPNALSLTSVLLGCSNLSALQLG-----KQVHQLVCKSPLSSDTTAGTSLIS 240
M+ ++ +PN +++ VL C++ +Q G K V+ + L + A ++
Sbjct: 320 KMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYA--CMVD 377
Query: 241 MYAKCGDLKEAWELFVQIP-RKDIVSWNAMISGYAQH 276
M ++ G KEA EL +P I W A++ G H
Sbjct: 378 MLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIH 414
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 95/196 (48%), Gaps = 32/196 (16%)
Query: 147 VESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLG 206
+ +A ++F E+ +++ A+I +V+ R + + FK +L G +PN + +V+
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGS 102
Query: 207 CSNLSALQLGKQVHQLVCKSPLSSDTTAG------------------------------- 235
+ ++LGKQ+H K L+S+ G
Sbjct: 103 STTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSI 162
Query: 236 TSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMK 295
T+LIS Y K + +EA LF +P + +V+WNA+I G++Q G E+A++ F +M +G+
Sbjct: 163 TNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVV 222
Query: 296 -PDWITFVAVLLACNH 310
P+ TF + A ++
Sbjct: 223 IPNESTFPCAITAISN 238
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 164/503 (32%), Positives = 256/503 (50%), Gaps = 50/503 (9%)
Query: 9 WNSILSAFAKKHGNFEQARQLF----EKIPEPNTVSYNIMLAC----HLHHFGVGSARAF 60
WN++++A+A+ + A LF +K P++ + + +++C L+++G
Sbjct: 341 WNAMVAAYAENDYGY-SALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAEL 399
Query: 61 FDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAV 120
F R + + +++ Y++ G +A ++F M EK+ V+W +++SG G A+
Sbjct: 400 FKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEAL 459
Query: 121 ECF-----------------------------------------YAAPVRSVITWTAMIT 139
+ F V +V +++I
Sbjct: 460 KVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLID 519
Query: 140 GYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALS 199
Y K G E A ++F MS + +V WN+MI+ Y N E + LF ML G P+++S
Sbjct: 520 LYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVS 579
Query: 200 LTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIP 259
+TSVL+ S+ ++L GK +H + + SDT +LI MY KCG K A +F ++
Sbjct: 580 ITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQ 639
Query: 260 RKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQ 319
K +++WN MI GY HG AL LFDEM+ G PD +TF++++ ACNH+G V+ G
Sbjct: 640 HKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKN 699
Query: 320 YFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIH 379
F M +D+GI+ EHYA MVDLLGRAG L EA IK+MP + +I+ LL A R H
Sbjct: 700 IFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTH 759
Query: 380 KNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSW 439
N++L +A+ LL ++P + YVQL N+Y A++ MKE + K PG SW
Sbjct: 760 HNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSW 819
Query: 440 IEISSEVHEFRSSDRLHPELASI 462
IE+S + F S P A I
Sbjct: 820 IEVSDRTNVFFSGGSSSPMKAEI 842
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 163/320 (50%), Gaps = 11/320 (3%)
Query: 54 VGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVAC 113
VG A F + K WN M++ YA+ A LF M +K+ + S +S ++C
Sbjct: 323 VGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISC 382
Query: 114 GDL-------DAAVECFYAAPVRSVITW-TAMITGYMKFGRVESAERLFREMSLKTLVTW 165
+ + + P++S T +A++T Y K G A +F+ M K +V W
Sbjct: 383 CSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAW 442
Query: 166 NAMIAGYVENGRAEDGLKLFKSML--ESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLV 223
++I+G +NG+ ++ LK+F M + KP++ +TSV C+ L AL+ G QVH +
Sbjct: 443 GSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSM 502
Query: 224 CKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKAL 283
K+ L + G+SLI +Y+KCG + A ++F + +++V+WN+MIS Y+++ E ++
Sbjct: 503 IKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSI 562
Query: 284 HLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDL 343
LF+ M G+ PD ++ +VL+A + + G +R GI + ++D+
Sbjct: 563 DLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLR-LGIPSDTHLKNALIDM 621
Query: 344 LGRAGRLPEAVDLIKSMPFK 363
+ G A ++ K M K
Sbjct: 622 YVKCGFSKYAENIFKKMQHK 641
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 187/410 (45%), Gaps = 56/410 (13%)
Query: 4 KSTVTWNSILSAFAKKHGNFEQARQLFEKI------PEPNTVSYNIMLACHLHHFGVGSA 57
+ WNS++ + K F++ F ++ P+ ++S + + C +F
Sbjct: 131 RDVTVWNSMIDGYFKFR-RFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEG 189
Query: 58 RAFFDRM--EVKDTASW--NTMISGYAQVGLMGEASMLFAVMPEK-NCVSWSAMVSGYVA 112
+ M DT S+ +I Y + GL +A +F + +K N V W+ M+ G+
Sbjct: 190 KQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGG 249
Query: 113 CGDLDAAVECFYAAPVRSV---------------------------------------IT 133
G +++++ + A SV
Sbjct: 250 SGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYV 309
Query: 134 WTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGA 193
T++++ Y K G V AE +F + K L WNAM+A Y EN L LF M +
Sbjct: 310 CTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSV 369
Query: 194 KPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWE 253
P++ +L++V+ CS L GK VH + K P+ S +T ++L+++Y+KCG +A+
Sbjct: 370 LPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYL 429
Query: 254 LFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMR--HDGMKPDWITFVAVLLACNHA 311
+F + KD+V+W ++ISG ++G ++AL +F +M+ D +KPD +V AC
Sbjct: 430 VFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGL 489
Query: 312 GLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPE-AVDLIKSM 360
+ G+Q M++ G+ + ++DL + G LPE A+ + SM
Sbjct: 490 EALRFGLQVHGSMIKT-GLVLNVFVGSSLIDLYSKCG-LPEMALKVFTSM 537
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 153/329 (46%), Gaps = 20/329 (6%)
Query: 64 MEVKDTASWNTMISGYAQVGLMGEAS------MLFAVMPEKNCVSWSAMVSGYVACGDLD 117
+ +D WN+MI GY + E ++F V P+ S S +VS V C + +
Sbjct: 128 VSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPD--AFSLSIVVS--VMCKEGN 183
Query: 118 AAVE---CFYAAPVRSVITW-----TAMITGYMKFGRVESAERLFREMSLKT-LVTWNAM 168
E + +R+ + TA+I Y KFG A R+F E+ K+ +V WN M
Sbjct: 184 FRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVM 243
Query: 169 IAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPL 228
I G+ +G E L L+ + K + S T L CS G+Q+H V K L
Sbjct: 244 IVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGL 303
Query: 229 SSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDE 288
+D TSL+SMY+KCG + EA +F + K + WNAM++ YA++ G AL LF
Sbjct: 304 HNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGF 363
Query: 289 MRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAG 348
MR + PD T V+ C+ GL + G + + I++ + ++ L + G
Sbjct: 364 MRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKR-PIQSTSTIESALLTLYSKCG 422
Query: 349 RLPEAVDLIKSMPFKPHPAIFGTLLGACR 377
P+A + KSM K A + G C+
Sbjct: 423 CDPDAYLVFKSMEEKDMVAWGSLISGLCK 451
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 125/254 (49%), Gaps = 30/254 (11%)
Query: 104 SAMVSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLV 163
+++V+ YV CG LD AV+ F W+ +G +S + +
Sbjct: 99 TSLVNMYVKCGFLDYAVQVFDG--------WSQSQSG----------------VSARDVT 134
Query: 164 TWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLT---SVLLGCSNLSALQLGKQVH 220
WN+MI GY + R ++G+ F+ ML G +P+A SL+ SV+ N + GKQ+H
Sbjct: 135 VWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREE-GKQIH 193
Query: 221 QLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK-DIVSWNAMISGYAQHGAG 279
+ ++ L +D+ T+LI MY K G +AW +FV+I K ++V WN MI G+ G
Sbjct: 194 GFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGIC 253
Query: 280 EKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYAC 339
E +L L+ +++ +K +F L AC+ + G Q +V+ G+ P
Sbjct: 254 ESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVK-MGLHNDPYVCTS 312
Query: 340 MVDLLGRAGRLPEA 353
++ + + G + EA
Sbjct: 313 LLSMYSKCGMVGEA 326
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 110/253 (43%), Gaps = 19/253 (7%)
Query: 166 NAMIAGYVENGRAEDGLKLFKSMLESGAKP---NALSLTSVLLGCSNLSALQLGKQVHQL 222
N+ I ++ G L L+ G+ P + + S+L CS L+ L GK +H
Sbjct: 28 NSGIRALIQKGEYLQALHLYSK--HDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 223 VCKSPLSSDTTAGTSLISMYAKCGDLKEAWELF-------VQIPRKDIVSWNAMISGYAQ 275
V D TSL++MY KCG L A ++F + +D+ WN+MI GY +
Sbjct: 86 VVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFK 145
Query: 276 HGAGEKALHLFDEMRHDGMKPDWITF-VAVLLACNHAGL-VDLGVQYFNMMVRDFGIKTK 333
++ + F M G++PD + + V + C + G Q M+R+ + T
Sbjct: 146 FRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRN-SLDTD 204
Query: 334 PEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLL----GACRIHKNLDLAEFAA 389
++D+ + G +A + + K + ++ ++ G+ +LDL A
Sbjct: 205 SFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAK 264
Query: 390 KNLLELDPSSATG 402
N ++L +S TG
Sbjct: 265 NNSVKLVSTSFTG 277
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 270 bits (689), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 170/516 (32%), Positives = 267/516 (51%), Gaps = 58/516 (11%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHH--------- 51
M K+ VTW S++ + + +G+ +A +LF ++PE N VS+ M++ +
Sbjct: 226 MSEKNVVTWTSMVYGYCR-YGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALML 284
Query: 52 ----------------------FGVGSARAFFDRMEVKDTAS-----WNT---------- 74
+ G F R+ + A W T
Sbjct: 285 FLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKS 344
Query: 75 MISGYAQVGLMGEA-SMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECF-YAAPVRSVI 132
++ YA GL+ A S+L ++C + +++ Y+ GDL+ A F + +
Sbjct: 345 LVHMYASSGLIASAQSLLNESFDLQSC---NIIINRYLKNGDLERAETLFERVKSLHDKV 401
Query: 133 TWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESG 192
+WT+MI GY++ G V A LF+++ K VTW MI+G V+N + L M+ G
Sbjct: 402 SWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCG 461
Query: 193 AKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSP--LSSDTTAGTSLISMYAKCGDLKE 250
KP + + +L S L GK +H ++ K+ D SL+SMYAKCG +++
Sbjct: 462 LKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIED 521
Query: 251 AWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNH 310
A+E+F ++ +KD VSWN+MI G + HG +KAL+LF EM G KP+ +TF+ VL AC+H
Sbjct: 522 AYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSH 581
Query: 311 AGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFG 370
+GL+ G++ F M + I+ +HY M+DLLGRAG+L EA + I ++PF P ++G
Sbjct: 582 SGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYG 641
Query: 371 TLLGACRIH-KNLD---LAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSM 426
LLG C ++ ++ D +AE AA LLELDP +A G+V L NVYA R + +R+ M
Sbjct: 642 ALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEM 701
Query: 427 KENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASI 462
V K PG SW+ ++ + F S D+ E A +
Sbjct: 702 GIKGVKKTPGCSWVVVNGRANVFLSGDKSASEAAQM 737
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 121/421 (28%), Positives = 190/421 (45%), Gaps = 51/421 (12%)
Query: 3 VKSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVG------- 55
+ V W S+LS +AK G ++AR LFE +PE N V+ N ML ++ +
Sbjct: 74 INRVVYWTSLLSKYAKT-GYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFR 132
Query: 56 -----------------------SARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLF 92
A FD M ++ SWNT+++G + G M +A +F
Sbjct: 133 EMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVF 192
Query: 93 AVMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAER 152
MP ++ VSW+AM+ GY+ ++ A F ++V+TWT+M+ GY ++G V A R
Sbjct: 193 DAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYR 252
Query: 153 LFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLE--SGAKPNALSLTSVLLGCSNL 210
LF EM + +V+W AMI+G+ N + L LF M + PN +L S+ C L
Sbjct: 253 LFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGL 312
Query: 211 SA--LQLGKQVHQLVCKS---PLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVS 265
+LG+Q+H V + + D SL+ MYA G + A L + D+ S
Sbjct: 313 GVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNE--SFDLQS 370
Query: 266 WNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMV 325
N +I+ Y ++G E+A LF+ ++ K W + + L AG V F +
Sbjct: 371 CNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYL---EAGDVSRAFGLFQKLH 427
Query: 326 RDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSM---PFKPHPAIFGTLLGACRIHKNL 382
G+ + M+ L + EA L+ M KP + + LL + NL
Sbjct: 428 DKDGVT-----WTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNL 482
Query: 383 D 383
D
Sbjct: 483 D 483
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 147/272 (54%), Gaps = 15/272 (5%)
Query: 48 HLHHFGVGSARAFFDRM----EVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSW 103
L G+ AR D++ + W +++S YA+ G + EA +LF VMPE+N V+
Sbjct: 52 RLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTC 111
Query: 104 SAMVSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLV 163
+AM++GYV C ++ A F P ++V++WT M+T GR E A LF EM + +V
Sbjct: 112 NAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVV 170
Query: 164 TWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLV 223
+WN ++ G + NG E ++F +M + +S +++ G ++ K L+
Sbjct: 171 SWNTLVTGLIRNGDMEKAKQVFDAM----PSRDVVSWNAMIKGYIENDGMEEAK----LL 222
Query: 224 CKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKAL 283
+ TS++ Y + GD++EA+ LF ++P ++IVSW AMISG+A + +AL
Sbjct: 223 FGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREAL 282
Query: 284 HLFDEMRH--DGMKPDWITFVAVLLACNHAGL 313
LF EM+ D + P+ T +++ AC G+
Sbjct: 283 MLFLEMKKDVDAVSPNGETLISLAYACGGLGV 314
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 268 bits (684), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 150/452 (33%), Positives = 227/452 (50%), Gaps = 40/452 (8%)
Query: 42 NIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVM------ 95
N M+ + + SAR FD M +D SWN+MISGY+Q G + ++ M
Sbjct: 171 NGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDF 230
Query: 96 -PE--------KNCVSWSAMVSG-------------------------YVACGDLDAAVE 121
P + C S ++ G Y CG LD A
Sbjct: 231 KPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARA 290
Query: 122 CFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDG 181
F + +T+ A+I+GYM G V+ A LF EM L TWNAMI+G ++N E+
Sbjct: 291 LFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEV 350
Query: 182 LKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISM 241
+ F+ M+ G++PN ++L+S+L + S L+ GK++H ++ ++ TS+I
Sbjct: 351 INSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDN 410
Query: 242 YAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITF 301
YAK G L A +F + +++W A+I+ YA HG + A LFD+M+ G KPD +T
Sbjct: 411 YAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTL 470
Query: 302 VAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMP 361
AVL A H+G D+ F+ M+ + I+ EHYACMV +L RAG+L +A++ I MP
Sbjct: 471 TAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMP 530
Query: 362 FKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVAR 421
P ++G LL + +L++A FA L E++P + Y +AN+Y RWE
Sbjct: 531 IDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEM 590
Query: 422 IRRSMKENKVVKAPGYSWIEISSEVHEFRSSD 453
+R MK + K PG SWIE + F + D
Sbjct: 591 VRNKMKRIGLKKIPGTSWIETEKGLRSFIAKD 622
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 100/322 (31%), Positives = 154/322 (47%), Gaps = 29/322 (9%)
Query: 11 SILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTA 70
S L +F + F QA +F++I N SYN +L + S +FD +
Sbjct: 61 SKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYT------SREMYFDAFSL--FL 112
Query: 71 SWNTMISGYAQVGLMGEASMLFAVMPEKNCV-----SWSAMVSGYVACGDLDAAVECFYA 125
SW + S+ + C S + V G+V G D+
Sbjct: 113 SWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDS------- 165
Query: 126 APVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLF 185
V MIT Y K +ESA ++F EMS + +V+WN+MI+GY ++G ED K++
Sbjct: 166 ----DVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMY 221
Query: 186 KSMLE-SGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAK 244
K+ML S KPN +++ SV C S L G +VH+ + ++ + D + ++I YAK
Sbjct: 222 KAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAK 281
Query: 245 CGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAV 304
CG L A LF ++ KD V++ A+ISGY HG ++A+ LF EM G+ W ++
Sbjct: 282 CGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLST-WNAMISG 340
Query: 305 LLACNHAGLVDLGVQYFNMMVR 326
L+ NH V + F M+R
Sbjct: 341 LMQNNHHEEV---INSFREMIR 359
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 122/255 (47%), Gaps = 12/255 (4%)
Query: 135 TAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLES--- 191
+ +I+ Y + R A +F E++++ ++NA++ Y D LF S + S
Sbjct: 61 SKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCY 120
Query: 192 ---GAKPNALSLTSVLL---GCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKC 245
A+P+++S++ VL GC + L +QVH V + SD G +I+ Y KC
Sbjct: 121 SSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKC 180
Query: 246 GDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRH-DGMKPDWITFVAV 304
+++ A ++F ++ +D+VSWN+MISGY+Q G+ E ++ M KP+ +T ++V
Sbjct: 181 DNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISV 240
Query: 305 LLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKP 364
AC + + G++ M+ + I+ ++ + G L A L M K
Sbjct: 241 FQACGQSSDLIFGLEVHKKMIENH-IQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKD 299
Query: 365 HPAIFGTLLGACRIH 379
+G ++ H
Sbjct: 300 -SVTYGAIISGYMAH 313
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 138/294 (46%), Gaps = 14/294 (4%)
Query: 15 AFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNT 74
F K G+ + AR LF+++ E ++V+Y +++ ++ H V A A F ME ++WN
Sbjct: 277 GFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNA 336
Query: 75 MISGYAQVGLMGEASMLFAVM----PEKNCVSWSAMVSGYVACGDLDAAVECFYAAPVR- 129
MISG Q E F M N V+ S+++ +L E +A +R
Sbjct: 337 MISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKE-IHAFAIRN 395
Query: 130 ----SVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLF 185
++ T++I Y K G + A+R+F ++L+ W A+I Y +G ++ LF
Sbjct: 396 GADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLF 455
Query: 186 KSMLESGAKPNALSLTSVLLGCSNLSALQLGKQV-HQLVCKSPLSSDTTAGTSLISMYAK 244
M G KP+ ++LT+VL ++ + + + ++ K + ++S+ ++
Sbjct: 456 DQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSR 515
Query: 245 CGDLKEAWELFVQIPRKDIVS-WNAMISGYAQHGAGEKALHLFDEMRHDGMKPD 297
G L +A E ++P I W A+++G + G E A D + M+P+
Sbjct: 516 AGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFE--MEPE 567
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 166/461 (36%), Positives = 245/461 (53%), Gaps = 43/461 (9%)
Query: 23 FEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQV 82
+ AR+LF+++PE N V++N+ML + + A FD++ KD SW TMI G +
Sbjct: 224 LKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRK 283
Query: 83 GLMGEASMLFAVM------PEK----NCVSWSAMVSG----------------------- 109
+ EA + + M P + + +S SA G
Sbjct: 284 NQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQ 343
Query: 110 ------YVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLV 163
Y D+ A++ F A+ + + A+I G++K G VE A +F + K +
Sbjct: 344 ATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIF 403
Query: 164 TWNAMIAGYVENGRAEDGLKLFKSMLESG-AKPNALSLTSVLLGCSNLSALQLGKQVHQL 222
+WNAMI+GY ++ + L LF+ M+ S KP+A+++ SV S+L +L+ GK+ H
Sbjct: 404 SWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDY 463
Query: 223 VCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQ---IPRKDIVSWNAMISGYAQHGAG 279
+ S + + ++I MYAKCG ++ A +F Q I I WNA+I G A HG
Sbjct: 464 LNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHA 523
Query: 280 EKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYAC 339
+ AL L+ +++ +KP+ ITFV VL AC HAGLV+LG YF M D GI+ +HY C
Sbjct: 524 KLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGC 583
Query: 340 MVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSS 399
MVDLLG+AGRL EA ++IK MP K I+G LL A R H N+++AE AA L +DPS
Sbjct: 584 MVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSH 643
Query: 400 ATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWI 440
V L+NVYA RWE VA +R M+ V + +S +
Sbjct: 644 GGCKVMLSNVYADAGRWEDVALVREEMRTRDVEWSRAFSGV 684
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 132/500 (26%), Positives = 207/500 (41%), Gaps = 98/500 (19%)
Query: 10 NSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDT 69
NS+L+ +AK A +F + ++ S+NIM+ ++ + A FD M +
Sbjct: 80 NSVLNMYAKCRL-LADAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSC 138
Query: 70 ASWNTMISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSG---------------- 109
S+ T+I GYAQ EA LF M N V+ + ++S
Sbjct: 139 VSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSL 198
Query: 110 -------------------YVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESA 150
Y C L A + F P R+++TW M+ GY K G +E A
Sbjct: 199 AIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQA 258
Query: 151 ERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNL 210
E LF +++ K +V+W MI G + + ++ L + ML G KP+ + + +L +
Sbjct: 259 EELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARS 318
Query: 211 SALQLGKQVHQLVCKS----------------PLSSD---------------TTAGTSLI 239
G Q+H + K +S+D + +LI
Sbjct: 319 VGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALI 378
Query: 240 SMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEM-RHDGMKPDW 298
+ + K G +++A E+F Q KDI SWNAMISGYAQ + + ALHLF EM +KPD
Sbjct: 379 AGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDA 438
Query: 299 ITFVAVLLACNHAGLVDLGVQ---YFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVD 355
IT V+V A + G ++ G + Y N I A ++D+ + G + A++
Sbjct: 439 ITMVSVFSAISSLGSLEEGKRAHDYLNFST----IPPNDNLTAAIIDMYAKCGSIETALN 494
Query: 356 L------IKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSAT-------- 401
+ I S P AI A H L L ++ L + P+S T
Sbjct: 495 IFHQTKNISSSTISPWNAIICG--SATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSAC 552
Query: 402 ---GYVQLANVYAAQNRWEH 418
G V+L Y + +H
Sbjct: 553 CHAGLVELGKTYFESMKSDH 572
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 128/251 (50%), Gaps = 17/251 (6%)
Query: 108 SGYVACGDLDAAVECFYAAPVRSVI---------TWTAMITGYMKFGRVESAERLFREMS 158
+GY+ L+ +C A SV ++ M+ GY++ R+ A +LF M
Sbjct: 75 NGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMP 134
Query: 159 LKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQ 218
++ V++ +I GY +N + + ++LF+ M G N ++L +V+ CS+L + +
Sbjct: 135 ERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRM 194
Query: 219 VHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGA 278
+ L K L T+L+ MY C LK+A +LF ++P +++V+WN M++GY++ G
Sbjct: 195 LQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGL 254
Query: 279 GEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYA 338
E+A LFD++ + D +++ ++ C +D + Y+ M+R KP
Sbjct: 255 IEQAEELFDQI----TEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLR---CGMKPSEVM 307
Query: 339 CMVDLLGRAGR 349
MVDLL + R
Sbjct: 308 -MVDLLSASAR 317
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 36/168 (21%)
Query: 199 SLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEA------- 251
+L S L C++ + + G+Q+H V KS L S+ S+++MYAKC L +A
Sbjct: 43 ALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDH 102
Query: 252 ---------------------WE---LFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFD 287
W+ LF +P + VS+ +I GYAQ+ +A+ LF
Sbjct: 103 AKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFR 162
Query: 288 EMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPE 335
EMR+ G+ + +T V+ AC+H LG + M++ IK K E
Sbjct: 163 EMRNLGIMLNEVTLATVISACSH-----LGGIWDCRMLQSLAIKLKLE 205
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 154/479 (32%), Positives = 264/479 (55%), Gaps = 20/479 (4%)
Query: 4 KSTVTWNSILSAFAKKHGNFEQARQL-----FEKIP-EPNTVSYNIMLACHLHHFGVG-S 56
K VTWN I+S + ++ G E A + EK+ + T++ + A + +G
Sbjct: 338 KDVVTWNLIISGYVQQ-GLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKE 396
Query: 57 ARAFFDRMEVK-DTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGD 115
+ + R + D +T++ YA+ G + +A +F EK+ + W+ +++ Y G
Sbjct: 397 VQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGL 456
Query: 116 LDAAVECFYAAPVR----SVITWTAMITGYMKFGRVESAERLFREMS----LKTLVTWNA 167
A+ FY + +VITW +I ++ G+V+ A+ +F +M + L++W
Sbjct: 457 SGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTT 516
Query: 168 MIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKS- 226
M+ G V+NG +E+ + + M ESG +PNA S+T L C++L++L +G+ +H + ++
Sbjct: 517 MMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNL 576
Query: 227 PLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLF 286
SS + TSL+ MYAKCGD+ +A ++F ++ NAMIS YA +G ++A+ L+
Sbjct: 577 QHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALY 636
Query: 287 DEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGR 346
+ G+KPD IT VL ACNHAG ++ ++ F +V +K EHY MVDLL
Sbjct: 637 RSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLAS 696
Query: 347 AGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQL 406
AG +A+ LI+ MPFKP + +L+ +C + +L ++ ++ LLE +P ++ YV +
Sbjct: 697 AGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTI 756
Query: 407 ANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSE--VHEFRSSDRLHPELASIH 463
+N YA + W+ V ++R MK + K PG SWI+I+ E VH F ++D+ H + I
Sbjct: 757 SNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQ 815
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 167/333 (50%), Gaps = 16/333 (4%)
Query: 57 ARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEK----------NCVSWSAM 106
A FD + ++ +WN ++ GY Q G EA LF+ M ++ C+S SA
Sbjct: 227 ASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASAN 286
Query: 107 VSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWN 166
+ G V G A+ + +++ T+++ Y K G +E AE +F M K +VTWN
Sbjct: 287 MGG-VEEGKQSHAIAIVNGMELDNILG-TSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWN 344
Query: 167 AMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKS 226
+I+GYV+ G ED + + + M K + ++L +++ + L+LGK+V +
Sbjct: 345 LIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRH 404
Query: 227 PLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLF 286
SD ++++ MYAKCG + +A ++F KD++ WN +++ YA+ G +AL LF
Sbjct: 405 SFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLF 464
Query: 287 DEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGR 346
M+ +G+ P+ IT+ ++L+ G VD F + ++ GI + M++ + +
Sbjct: 465 YGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMF-LQMQSSGIIPNLISWTTMMNGMVQ 523
Query: 347 AGRLPEAVDLIKSMP---FKPHPAIFGTLLGAC 376
G EA+ ++ M +P+ L AC
Sbjct: 524 NGCSEEAILFLRKMQESGLRPNAFSITVALSAC 556
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 166/338 (49%), Gaps = 32/338 (9%)
Query: 57 ARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPE--------------KNC-- 100
A F ++ V++ SW +I ++GL A M F M E K C
Sbjct: 126 AEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGA 185
Query: 101 VSWSAM---VSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREM 157
+ WS V GYV L+ +C + A +++ Y K G ++ A ++F E+
Sbjct: 186 LKWSRFGRGVHGYVVKSGLE---DCVFVA--------SSLADMYGKCGVLDDASKVFDEI 234
Query: 158 SLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGK 217
+ V WNA++ GYV+NG+ E+ ++LF M + G +P +++++ L +N+ ++ GK
Sbjct: 235 PDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGK 294
Query: 218 QVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHG 277
Q H + + + D GTSL++ Y K G ++ A +F ++ KD+V+WN +ISGY Q G
Sbjct: 295 QSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQG 354
Query: 278 AGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHY 337
E A+++ MR + +K D +T ++ A + LG + +R ++
Sbjct: 355 LVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIR-HSFESDIVLA 413
Query: 338 ACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGA 375
+ ++D+ + G + +A + S + ++ TLL A
Sbjct: 414 STVMDMYAKCGSIVDAKKVFDS-TVEKDLILWNTLLAA 450
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 116/230 (50%), Gaps = 8/230 (3%)
Query: 123 FYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGL 182
FYA R+ T ++ Y K +E AE LF ++ ++ + +W A+I G E L
Sbjct: 102 FYA---RNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGAL 158
Query: 183 KLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMY 242
F MLE+ P+ + +V C L + G+ VH V KS L +SL MY
Sbjct: 159 MGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMY 218
Query: 243 AKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFV 302
KCG L +A ++F +IP ++ V+WNA++ GY Q+G E+A+ LF +MR G++P +T
Sbjct: 219 GKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVS 278
Query: 303 AVLLACNHAGLVDLGVQ-----YFNMMVRDFGIKTKPEHYACMVDLLGRA 347
L A + G V+ G Q N M D + T ++ C V L+ A
Sbjct: 279 TCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYA 328
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 92/219 (42%), Gaps = 11/219 (5%)
Query: 169 IAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSP- 227
++ +NG ++ L L M + +L GC L GKQ+H + K+
Sbjct: 42 VSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGD 101
Query: 228 -LSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLF 286
+ + T L+ YAKC L+ A LF ++ +++ SW A+I + G E AL F
Sbjct: 102 FYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGF 161
Query: 287 DEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEH----YACMVD 342
EM + + PD V AC L F V + +K+ E + + D
Sbjct: 162 VEMLENEIFPDNFVVPNVCKACGA-----LKWSRFGRGVHGYVVKSGLEDCVFVASSLAD 216
Query: 343 LLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKN 381
+ G+ G L +A + +P + A ++G + KN
Sbjct: 217 MYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKN 255
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 267 bits (682), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 141/410 (34%), Positives = 229/410 (55%), Gaps = 9/410 (2%)
Query: 57 ARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYV-ACGD 115
A F +M +D W TM++G+AQ G +A + M + ++ G + A GD
Sbjct: 170 AEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGD 229
Query: 116 L-DAAVE------CFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAM 168
L D + + +V+ T+++ Y K G +E A R+F M KT V+W ++
Sbjct: 230 LGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSL 289
Query: 169 IAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPL 228
I+G+ +NG A + M G +P+ ++L VL+ CS + +L+ G+ VH + K +
Sbjct: 290 ISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHV 349
Query: 229 SSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDE 288
TA T+L+ MY+KCG L + E+F + RKD+V WN MIS Y HG G++ + LF +
Sbjct: 350 LDRVTA-TALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLK 408
Query: 289 MRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAG 348
M ++PD TF ++L A +H+GLV+ G +F++M+ + I+ +HY C++DLL RAG
Sbjct: 409 MTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAG 468
Query: 349 RLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLAN 408
R+ EA+D+I S I+ LL C H+NL + + AA +L+L+P S ++N
Sbjct: 469 RVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSN 528
Query: 409 VYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPE 458
+A N+W+ VA++R+ M+ + K PGYS IE++ E+ F D H E
Sbjct: 529 FFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHE 578
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 145/306 (47%), Gaps = 25/306 (8%)
Query: 13 LSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASW 72
L A + G AR++F+++P+ YN M+ + +D+M +
Sbjct: 56 LIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPD 115
Query: 73 NTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSG-YVACGDLDAAVECFYAAPVRSV 131
++ + M K C+S + G V C +D + V
Sbjct: 116 SSTFT-----------------MTIKACLSGLVLEKGEAVWCKAVDFGYK-------NDV 151
Query: 132 ITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLES 191
++++ YMK G+++ AE LF +M+ + ++ W M+ G+ + G++ ++ ++ M
Sbjct: 152 FVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNE 211
Query: 192 GAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEA 251
G + + + +L +L ++G+ VH + ++ L + TSL+ MYAK G ++ A
Sbjct: 212 GFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVA 271
Query: 252 WELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHA 311
+F ++ K VSW ++ISG+AQ+G KA EM+ G +PD +T V VL+AC+
Sbjct: 272 SRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQV 331
Query: 312 GLVDLG 317
G + G
Sbjct: 332 GSLKTG 337
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 109/227 (48%), Gaps = 1/227 (0%)
Query: 137 MITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPN 196
+I + G + A ++F E+ + + +N+MI Y ++ L+L+ M+ +P+
Sbjct: 56 LIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPD 115
Query: 197 ALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFV 256
+ + T + C + L+ G+ V +D +S++++Y KCG + EA LF
Sbjct: 116 SSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFG 175
Query: 257 QIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDL 316
++ ++D++ W M++G+AQ G KA+ + EM+++G D + + +L A G +
Sbjct: 176 KMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKM 235
Query: 317 GVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFK 363
G + R G+ +VD+ + G + A + M FK
Sbjct: 236 GRSVHGYLYRT-GLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFK 281
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 84/171 (49%), Gaps = 2/171 (1%)
Query: 218 QVHQLVCKS-PLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQH 276
Q+H V + L + ++ LI+ + G++ A ++F ++P++ + +N+MI Y++
Sbjct: 35 QIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRG 94
Query: 277 GAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEH 336
++ L L+D+M + ++PD TF + AC +++ G + V DFG K
Sbjct: 95 KNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAV-DFGYKNDVFV 153
Query: 337 YACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEF 387
+ +++L + G++ EA L M + + G + K+L EF
Sbjct: 154 CSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEF 204
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 112/262 (42%), Gaps = 30/262 (11%)
Query: 1 MKVKSTVTWNSILSAFAKK---HGNFEQARQLFEKIPEPNTVSY-NIMLACHLHHFGVGS 56
M K+ V+W S++S FA+ + FE ++ +P+ V+ +++AC VGS
Sbjct: 278 MMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACS----QVGS 333
Query: 57 ARA------FFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGY 110
+ + + V D + ++ Y++ G + + +F + K+ V W+ M+S Y
Sbjct: 334 LKTGRLVHCYILKRHVLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCY 393
Query: 111 VACGDLDAAVECFYAAPVRSV----ITWTAMITGYMKFGRVESAERLFREMSLKTLVT-- 164
G+ V F ++ T+ ++++ G VE + F M K +
Sbjct: 394 GIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPS 453
Query: 165 ---WNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSL-TSVLLGCSNLSALQLGKQVH 220
+ +I GR E+ L M+ S NAL + ++L GC N L +G
Sbjct: 454 EKHYVCLIDLLARAGRVEEAL----DMINSEKLDNALPIWVALLSGCINHRNLSVGDIAA 509
Query: 221 QLVCKSPLSSDTTAGTSLISMY 242
+ + L+ D+ +L+S +
Sbjct: 510 NKILQ--LNPDSIGIQTLVSNF 529
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 156/462 (33%), Positives = 255/462 (55%), Gaps = 27/462 (5%)
Query: 13 LSAFAKKHG---NFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDT 69
L A+ KHG N + L + + N L C++ RAF RM KD
Sbjct: 408 LHAYVIKHGWDSNLQVGNTLIDMYSKCN-------LTCYM-------GRAFL-RMHDKDL 452
Query: 70 ASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYV--ACGDLDA-----AVEC 122
SW T+I+GYAQ EA LF + +K + M+ G + A L + + C
Sbjct: 453 ISWTTVIAGYAQNDCHVEALELFRDVAKKR-MEIDEMILGSILRASSVLKSMLIVKEIHC 511
Query: 123 -FYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDG 181
+ + ++ Y K + A R+F + K +V+W +MI+ NG +
Sbjct: 512 HILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEA 571
Query: 182 LKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISM 241
++LF+ M+E+G ++++L +L ++LSAL G+++H + + + + +++ M
Sbjct: 572 VELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDM 631
Query: 242 YAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITF 301
YA CGDL+ A +F +I RK ++ + +MI+ Y HG G+ A+ LFD+MRH+ + PD I+F
Sbjct: 632 YACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISF 691
Query: 302 VAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMP 361
+A+L AC+HAGL+D G + +M ++ ++ PEHY C+VD+LGRA + EA + +K M
Sbjct: 692 LALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMK 751
Query: 362 FKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVAR 421
+P ++ LL ACR H ++ E AA+ LLEL+P + V ++NV+A Q RW V +
Sbjct: 752 TEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEK 811
Query: 422 IRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIH 463
+R MK + + K PG SWIE+ +VH+F + D+ HPE I+
Sbjct: 812 VRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIY 853
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 145/279 (51%), Gaps = 16/279 (5%)
Query: 42 NIMLACHLHHFGVGSARAFFDRMEVK-DTASWNTMISGYAQVGLMGEASMLFAVM----P 96
N +++ + + + +AR FD + K D WN+++S Y+ G E LF M P
Sbjct: 221 NALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGP 280
Query: 97 EKNCVSWSAMVSGYVACGDLDAAV--ECFYAAPVRS------VITWTAMITGYMKFGRVE 148
N + +VS AC A + +A+ ++S + A+I Y + G++
Sbjct: 281 APNSYT---IVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMP 337
Query: 149 SAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCS 208
AER+ R+M+ +VTWN++I GYV+N ++ L+ F M+ +G K + +S+TS++
Sbjct: 338 QAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASG 397
Query: 209 NLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNA 268
LS L G ++H V K S+ G +LI MY+KC F+++ KD++SW
Sbjct: 398 RLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTT 457
Query: 269 MISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLA 307
+I+GYAQ+ +AL LF ++ M+ D + ++L A
Sbjct: 458 VIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRA 496
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 144/291 (49%), Gaps = 25/291 (8%)
Query: 19 KHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISG 78
K G+ + A ++F+++P+ ++N M+ ++ + SA A + WN + G
Sbjct: 128 KCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALY----------WNMRVEG 177
Query: 79 YAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPVRSVITWTAMI 138
+GL ++L A ++ S S + S V G A++
Sbjct: 178 -VPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTG------------FIVNALV 224
Query: 139 TGYMKFGRVESAERLFREMSLK-TLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNA 197
+ Y K + +A RLF K V WN++++ Y +G++ + L+LF+ M +G PN+
Sbjct: 225 SMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNS 284
Query: 198 LSLTSVLLGCSNLSALQLGKQVHQLVCKSPL-SSDTTAGTSLISMYAKCGDLKEAWELFV 256
++ S L C S +LGK++H V KS SS+ +LI+MY +CG + +A +
Sbjct: 285 YTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILR 344
Query: 257 QIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLA 307
Q+ D+V+WN++I GY Q+ ++AL F +M G K D ++ +++ A
Sbjct: 345 QMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 395
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 109/223 (48%), Gaps = 5/223 (2%)
Query: 141 YMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSL 200
Y K G ++ AE++F EM +T WN MI YV NG L L+ +M G S
Sbjct: 126 YGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSF 185
Query: 201 TSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPR 260
++L C+ L ++ G ++H L+ K S +L+SMYAK DL A LF
Sbjct: 186 PALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQE 245
Query: 261 K-DIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQ 319
K D V WN+++S Y+ G + L LF EM G P+ T V+ L AC+ LG +
Sbjct: 246 KGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKE 305
Query: 320 YFNMMVRDFGIKTKPEHYAC--MVDLLGRAGRLPEAVDLIKSM 360
+++ E Y C ++ + R G++P+A +++ M
Sbjct: 306 IHASVLK--SSTHSSELYVCNALIAMYTRCGKMPQAERILRQM 346
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 65/126 (51%), Gaps = 3/126 (2%)
Query: 203 VLLGCSNLSALQLGKQVHQLVCKS--PLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPR 260
VL C A+ G+Q+H + K+ D AG L+ MY KCG L +A ++F ++P
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAG-KLVFMYGKCGSLDDAEKVFDEMPD 144
Query: 261 KDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQY 320
+ +WN MI Y +G AL L+ MR +G+ +F A+L AC + G +
Sbjct: 145 RTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSEL 204
Query: 321 FNMMVR 326
+++V+
Sbjct: 205 HSLLVK 210
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 153/455 (33%), Positives = 247/455 (54%), Gaps = 34/455 (7%)
Query: 37 NTVSYNIMLACHLH------HFGVGSARAFFDRMEVKDTASWNTMISGYAQVGL--MGEA 88
NT + + +L LH HF S+ FD +E+ ++ ++TMI ++ +G
Sbjct: 42 NTYAISKLLTAFLHLPNLNKHFHYASS--IFDSIEIPNSFVYDTMIRICSRSSQPHLGLR 99
Query: 89 SMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVE 148
L V E+ ++ S + ++ L A CF++ + + W ++ G V+
Sbjct: 100 YFLLMVKEEEEDITPSYLTFHFLIVACLKA---CFFSVG-KQIHCWVVKNGVFLSDGHVQ 155
Query: 149 S--------------AERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAK 194
+ A ++F E+ +V W+ ++ GYV G +GL++FK ML G +
Sbjct: 156 TGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIE 215
Query: 195 PNALSLTSVLLGCSNLSALQLGKQVHQLVCKSP-LSSDTTAGTSLISMYAKCGDLKEAWE 253
P+ S+T+ L C+ + AL GK +H+ V K + SD GT+L+ MYAKCG ++ A E
Sbjct: 216 PDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVE 275
Query: 254 LFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEM-RHDGMKPDWITFVAVLLACNHAG 312
+F ++ R+++ SW A+I GYA +G +KA D + R DG+KPD + + VL AC H G
Sbjct: 276 VFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGG 335
Query: 313 LVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTL 372
++ G M +GI K EHY+C+VDL+ RAGRL +A+DLI+ MP KP +++G L
Sbjct: 336 FLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGAL 395
Query: 373 LGACRIHKNLDLAEFAAKNLLELDPSSA----TGYVQLANVYAAQNRWEHVARIRRSMKE 428
L CR HKN++L E A +NLL+L+ + VQL+N+Y + R ++R +++
Sbjct: 396 LNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQ 455
Query: 429 NKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIH 463
+ K PG+S +E+ V +F S D HP L IH
Sbjct: 456 RGIRKTPGWSLLEVDGIVTKFVSGDVSHPNLLQIH 490
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 265 bits (678), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 156/517 (30%), Positives = 269/517 (52%), Gaps = 60/517 (11%)
Query: 1 MKVKSTVTWNSILSAFAKKHG-NFEQA---RQLFEKIPEPNTVSYN--IMLACHLHHF-- 52
M K ++WNS+LS +++ FE R + + E + VS+ I CH
Sbjct: 235 MSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKL 294
Query: 53 -----GVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMV 107
G+ R + +EV N ++S Y++ G++ +F M E+N VSW+ M+
Sbjct: 295 ARQIHGLCIKRGYESLLEVG-----NILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI 349
Query: 108 SGY-----------------------------VACGD-----LDAAVECFYAAPVRSVIT 133
S V C + L C V
Sbjct: 350 SSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSV 409
Query: 134 WTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGA 193
+ IT Y KF +E A++ F +++ + +++WNAMI+G+ +NG + + LK+F S +
Sbjct: 410 GNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSA-AAET 468
Query: 194 KPNALSLTSVL--LGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEA 251
PN + SVL + + +++ G++ H + K L+S ++L+ MYAK G++ E+
Sbjct: 469 MPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDES 528
Query: 252 WELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHA 311
++F ++ +K+ W ++IS Y+ HG E ++LF +M + + PD +TF++VL ACN
Sbjct: 529 EKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRK 588
Query: 312 GLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGT 371
G+VD G + FNMM+ + ++ EHY+CMVD+LGRAGRL EA +L+ +P P ++ +
Sbjct: 589 GMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQS 648
Query: 372 LLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKV 431
+LG+CR+H N+ + A+ +E+ P + YVQ+ N+YA + W+ A IR++M++ V
Sbjct: 649 MLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNV 708
Query: 432 VKAPGYSWIEI-----SSEVHEFRSSDRLHPELASIH 463
K G+SWI++ S + F S D+ HP+ I+
Sbjct: 709 SKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIY 745
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 153/316 (48%), Gaps = 16/316 (5%)
Query: 56 SARAFFDRMEVKDTASWNTMISGY--AQVGL-----MGEASMLFAVMPEKNCVSWSAMVS 108
+A F+ + D SWNT++SG+ Q+ L M A ++F +S+
Sbjct: 129 NALCIFENLVDPDVVSWNTILSGFDDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSE 188
Query: 109 GYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAM 168
G++ L + V ++ + IT Y + G A R+F EMS K +++WN++
Sbjct: 189 GFLLGLQLQSTV--VKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSL 246
Query: 169 IAGYVENGR-AEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSP 227
++G + G + + +F+ M+ G + + +S TSV+ C + + L+L +Q+H L K
Sbjct: 247 LSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRG 306
Query: 228 LSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFD 287
S G L+S Y+KCG L+ +F Q+ +++VSW MIS + A+ +F
Sbjct: 307 YESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNK-----DDAVSIFL 361
Query: 288 EMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRA 347
MR DG+ P+ +TFV ++ A + G++ + ++ G ++P + L +
Sbjct: 362 NMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKT-GFVSEPSVGNSFITLYAKF 420
Query: 348 GRLPEAVDLIKSMPFK 363
L +A + + F+
Sbjct: 421 EALEDAKKAFEDITFR 436
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 171/339 (50%), Gaps = 21/339 (6%)
Query: 57 ARAFFDRMEVKDTASWNTMISGYAQVGLMG-EASMLFAVM----PEKNCVSWSAMVSGYV 111
AR FD M KD SWN+++SG +Q G G EA ++F M E + VS++++++
Sbjct: 228 ARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCC 287
Query: 112 ACGDLDAAVE----CFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNA 167
DL A + C + +++ Y K G +E+ + +F +MS + +V+W
Sbjct: 288 HETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTT 347
Query: 168 MIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSP 227
MI+ +D + +F +M G PN ++ ++ ++ G ++H L K+
Sbjct: 348 MIS-----SNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTG 402
Query: 228 LSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFD 287
S+ + G S I++YAK L++A + F I ++I+SWNAMISG+AQ+G +AL +F
Sbjct: 403 FVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFL 462
Query: 288 EMRHDGMKPDWITFVAVLLACNHAGLVDLGV---QYFNMMVRDFGIKTKPEHYACMVDLL 344
+ M P+ TF +VL A A D+ V Q + + G+ + P + ++D+
Sbjct: 463 SAAAETM-PNEYTFGSVLNAIAFAE--DISVKQGQRCHAHLLKLGLNSCPVVSSALLDMY 519
Query: 345 GRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLD 383
+ G + E+ + M + + ++ +++ A H + +
Sbjct: 520 AKRGNIDESEKVFNEMS-QKNQFVWTSIISAYSSHGDFE 557
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 105/197 (53%), Gaps = 4/197 (2%)
Query: 131 VITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLE 190
V A++ Y K GR ++A +F + +V+WN +++G+ +N A L M
Sbjct: 111 VCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQIA---LNFVVRMKS 167
Query: 191 SGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKE 250
+G +A + ++ L C LG Q+ V K+ L SD G S I+MY++ G +
Sbjct: 168 AGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRG 227
Query: 251 AWELFVQIPRKDIVSWNAMISGYAQHGA-GEKALHLFDEMRHDGMKPDWITFVAVLLACN 309
A +F ++ KD++SWN+++SG +Q G G +A+ +F +M +G++ D ++F +V+ C
Sbjct: 228 ARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCC 287
Query: 310 HAGLVDLGVQYFNMMVR 326
H + L Q + ++
Sbjct: 288 HETDLKLARQIHGLCIK 304
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 92/218 (42%), Gaps = 10/218 (4%)
Query: 150 AERLFREMSLKTLVT-WNAMIAGYVENGRAEDGLKLFKSMLE---SGAKPNALSLTSVLL 205
A +LF S + T N I+ + L +FK L+ G + ++L L
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALK 86
Query: 206 GCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVS 265
C L+ G Q+H S +S +++ MY K G A +F + D+VS
Sbjct: 87 ACR--GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVS 144
Query: 266 WNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMV 325
WN ++SG+ + + AL+ M+ G+ D T+ L C + LG+Q + +V
Sbjct: 145 WNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVV 201
Query: 326 RDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFK 363
+ G+++ + + R+G A + M FK
Sbjct: 202 KT-GLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFK 238
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 265 bits (677), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 165/525 (31%), Positives = 261/525 (49%), Gaps = 35/525 (6%)
Query: 57 ARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYV-ACGD 115
A F M + SW T+I G G + + L M ++ +SG + AC
Sbjct: 380 ASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSK 439
Query: 116 LDAA--VECFYAAPVR-----SVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAM 168
L V +A +R ++ +++ Y +V+ A + R M + +T+ ++
Sbjct: 440 LRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSL 499
Query: 169 IAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPL 228
+ + E G+ E L + M G + + LSL + +NL AL+ GK +H KS
Sbjct: 500 VTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGF 559
Query: 229 SSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDE 288
S + SL+ MY+KCG L++A ++F +I D+VSWN ++SG A +G AL F+E
Sbjct: 560 SGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEE 619
Query: 289 MRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAG 348
MR +PD +TF+ +L AC++ L DLG++YF +M + + I+ + EHY +V +LGRAG
Sbjct: 620 MRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAG 679
Query: 349 RLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLAN 408
RL EA ++++M KP+ IF TLL ACR NL L E A L L PS Y+ LA+
Sbjct: 680 RLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLAD 739
Query: 409 VYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIHXXXXX 468
+Y + E + R M E ++ K G S +E+ +VH F S D + +
Sbjct: 740 LYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSEDVTRVDKTN------- 792
Query: 469 XXXXXXXAGYVPDLEFALHDVGEELKE--------QLLLWHSEKLAIAYGLLKVPLGLPI 520
G ++E + EE+K + +HS K A+ YG + P+
Sbjct: 793 --------GIYAEIE----SIKEEIKRFGSPYRGNENASFHSAKQAVVYGFIYASPEAPV 840
Query: 521 RVFKNLRVCGDCHTAIKYISAIEGREIIVRDTTRFHHFKDGFCSC 565
V KN +C DCH + ++ + ++I VRD + H FK+G CSC
Sbjct: 841 HVVKNKILCKDCHEFVSILTRLVDKKITVRDGNQVHIFKNGECSC 885
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 116/223 (52%), Gaps = 2/223 (0%)
Query: 137 MITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPN 196
+++ Y+K + +A +LF EMS +T+ W MI+ + ++ L LF+ M+ SG PN
Sbjct: 64 LLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPN 123
Query: 197 ALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFV 256
+ +SV+ C+ L + G +VH V K+ ++ G+SL +Y+KCG KEA ELF
Sbjct: 124 EFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFS 183
Query: 257 QIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDL 316
+ D +SW MIS +AL + EM G+ P+ TFV +L A + GL
Sbjct: 184 SLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFG 243
Query: 317 GVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKS 359
+ N++VR GI +VD + ++ +AV ++ S
Sbjct: 244 KTIHSNIIVR--GIPLNVVLKTSLVDFYSQFSKMEDAVRVLNS 284
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 155/360 (43%), Gaps = 56/360 (15%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKI----PEPNTVSYN-IMLACH-LHHFGV 54
M ++ W ++SAF K F A LFE++ PN +++ ++ +C L
Sbjct: 84 MSHRTVFAWTVMISAFTKSQ-EFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISY 142
Query: 55 GSARAFFDRMEVKDTASWNTMISG-----YAQVGLMGEASMLFAVMPEKNCVSWSAMVSG 109
G +K N+++ Y++ G EA LF+ + + +SW+ M+S
Sbjct: 143 GGR---VHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISS 199
Query: 110 YVACGDLDAAVECFYAAPVRS--------------------------------------- 130
V A++ FY+ V++
Sbjct: 200 LVGARKWREALQ-FYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPLN 258
Query: 131 VITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLE 190
V+ T+++ Y +F ++E A R+ + + W ++++G+V N RA++ + F M
Sbjct: 259 VVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRS 318
Query: 191 SGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLK- 249
G +PN + +++L CS + +L GKQ+H K T G +L+ MY KC +
Sbjct: 319 LGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEV 378
Query: 250 EAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACN 309
EA +F + ++VSW +I G HG + L EM ++P+ +T VL AC+
Sbjct: 379 EASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACS 438
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 142/316 (44%), Gaps = 22/316 (6%)
Query: 42 NIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVM----PE 97
N +L+ +L G+ +AR FD M + +W MIS + + A LF M
Sbjct: 62 NNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTH 121
Query: 98 KNCVSWSAMVSGYVACGDLDAAVECFYAAPVRSVITWTAM----ITG------YMKFGRV 147
N ++S++V D+ Y V + T + G Y K G+
Sbjct: 122 PNEFTFSSVVRSCAGLRDIS------YGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQF 175
Query: 148 ESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGC 207
+ A LF + ++W MI+ V + + L+ + M+++G PN + LLG
Sbjct: 176 KEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVK-LLGA 234
Query: 208 SNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWN 267
S+ L+ GK +H + + + TSL+ Y++ +++A + +D+ W
Sbjct: 235 SSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWT 294
Query: 268 AMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRD 327
+++SG+ ++ ++A+ F EMR G++P+ T+ A+L C+ +D G Q + ++
Sbjct: 295 SVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIK- 353
Query: 328 FGIKTKPEHYACMVDL 343
G + + +VD+
Sbjct: 354 VGFEDSTDVGNALVDM 369
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 10/166 (6%)
Query: 199 SLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQI 258
S +L C + S+ ++G +H V K L + +L+S+Y K + A +LF ++
Sbjct: 26 SCIRILSFCESNSS-RIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEM 84
Query: 259 PRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGV 318
+ + +W MIS + + AL LF+EM G P+ TF +V+ +C AGL D+
Sbjct: 85 SHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSC--AGLRDIS- 141
Query: 319 QYFNMMVRDFGIKTKPEHYAC----MVDLLGRAGRLPEAVDLIKSM 360
+ V IKT E + + DL + G+ EA +L S+
Sbjct: 142 --YGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSL 185
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 152/455 (33%), Positives = 250/455 (54%), Gaps = 34/455 (7%)
Query: 37 NTVSYNIMLACHLH------HFGVGSARAFFDRMEVKDTASWNTMISGYAQVGL--MGEA 88
NT + + +L LH HF S+ FD +E+ ++ ++TMI ++ +G
Sbjct: 42 NTYAISKLLTAFLHLPNLNKHFHYASS--IFDSIEIPNSFVYDTMIRICSRSSQPHLGLR 99
Query: 89 SMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPVRSVITW-------------- 134
L V E+ ++ S + ++ L A CF++ + + W
Sbjct: 100 YFLLMVKEEEEDIAPSYLTFHFLIVACLKA---CFFSVG-KQIHCWVVKNGVFLSDSHVQ 155
Query: 135 TAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAK 194
T ++ Y++ + A ++F E+ +V W+ ++ GYV G +GL++F+ ML G +
Sbjct: 156 TGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLE 215
Query: 195 PNALSLTSVLLGCSNLSALQLGKQVHQLVCK-SPLSSDTTAGTSLISMYAKCGDLKEAWE 253
P+ S+T+ L C+ + AL GK +H+ V K S + SD GT+L+ MYAKCG ++ A E
Sbjct: 216 PDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVE 275
Query: 254 LFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEM-RHDGMKPDWITFVAVLLACNHAG 312
+F ++ R+++ SW A+I GYA +G +KA+ + + R DG+KPD + + VL AC H G
Sbjct: 276 VFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGG 335
Query: 313 LVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTL 372
++ G M + I K EHY+C+VDL+ RAGRL +A++LI+ MP KP +++G L
Sbjct: 336 FLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGAL 395
Query: 373 LGACRIHKNLDLAEFAAKNLLELDPSSA----TGYVQLANVYAAQNRWEHVARIRRSMKE 428
L CR HKN++L E A KNLL+L+ + VQL+N+Y + R +++R +++
Sbjct: 396 LNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQ 455
Query: 429 NKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIH 463
V K PG+S +E+ V +F S D HP L IH
Sbjct: 456 RGVRKTPGWSVLEVDGNVTKFVSGDVSHPNLLQIH 490
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 261 bits (668), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 137/356 (38%), Positives = 207/356 (58%), Gaps = 4/356 (1%)
Query: 104 SAMVSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLV 163
+ ++ Y + D +A + F P ++++TW +++ Y K G V SA +F EMS + +V
Sbjct: 147 NTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVV 206
Query: 164 TWNAMIAGYVENGRAEDGLKLFKSMLESGA-KPNALSLTSVLLGCSNLSALQLGKQVHQL 222
TW++MI GYV+ G L++F M+ G+ K N +++ SV+ C++L AL GK VH+
Sbjct: 207 TWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRY 266
Query: 223 VCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQ--IPRKDIVSWNAMISGYAQHGAGE 280
+ L TSLI MYAKCG + +AW +F + + D + WNA+I G A HG
Sbjct: 267 ILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIR 326
Query: 281 KALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACM 340
++L LF +MR + PD ITF+ +L AC+H GLV +F + ++ G + K EHYACM
Sbjct: 327 ESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSL-KESGAEPKSEHYACM 385
Query: 341 VDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSA 400
VD+L RAG + +A D I MP KP ++ G LL C H NL+LAE K L+EL P +
Sbjct: 386 VDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHND 445
Query: 401 TGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLH 456
YV LANVYA ++ +R +M++ V K G+S +++ H F + D+ H
Sbjct: 446 GRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTH 501
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 138/296 (46%), Gaps = 16/296 (5%)
Query: 3 VKSTVTWN-SILSAFAKKHGNFEQ---ARQLFEKIPEPNTVSYNIMLACHLHHFGVGSAR 58
VKS + W+ I + +G+F AR+LF+++P N V++N +L + V SAR
Sbjct: 135 VKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSAR 194
Query: 59 AFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWS--AMVSGYVACGDL 116
FD M +D +W++MI GY + G +A +F M + MVS AC L
Sbjct: 195 LVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHL 254
Query: 117 DA----AVECFYAAPVR---SVITWTAMITGYMKFGRVESAERLFREMSLKTL--VTWNA 167
A Y V +VI T++I Y K G + A +F S+K + WNA
Sbjct: 255 GALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNA 314
Query: 168 MIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSP 227
+I G +G + L+LF M ES P+ ++ +L CS+ ++ + + +S
Sbjct: 315 IIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESG 374
Query: 228 LSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSW-NAMISGYAQHGAGEKA 282
+ ++ + ++ G +K+A + ++P K S A+++G HG E A
Sbjct: 375 AEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELA 430
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 129/313 (41%), Gaps = 40/313 (12%)
Query: 132 ITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLES 191
++ T + G V+ A + ++S WN +I G+ + E + ++ ML
Sbjct: 43 VSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRF 102
Query: 192 GAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEA 251
G P+ ++ ++ S LS +LG +H V KS L D +LI MY D A
Sbjct: 103 GLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASA 162
Query: 252 WELFVQIPRKDIVSWN-------------------------------AMISGYAQHGAGE 280
+LF ++P K++V+WN +MI GY + G
Sbjct: 163 RKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYN 222
Query: 281 KALHLFDE-MRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYAC 339
KAL +FD+ MR K + +T V+V+ AC H G ++ G + + + D +
Sbjct: 223 KALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRG-KTVHRYILDVHLPLTVILQTS 281
Query: 340 MVDLLGRAGRLPEAVDLIKSMPFKPHP-----AIFGTLLGACRIHKNLDLAEFAAKNLLE 394
++D+ + G + +A + K AI G L I ++L L F +
Sbjct: 282 LIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQL--FHKMRESK 339
Query: 395 LDPSSATGYVQLA 407
+DP T LA
Sbjct: 340 IDPDEITFLCLLA 352
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 261 bits (668), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 148/435 (34%), Positives = 239/435 (54%), Gaps = 22/435 (5%)
Query: 22 NFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQ 81
N + A ++F I PN + +N M+ C+ + +FF M K W Y
Sbjct: 51 NSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSM--KSRGIW---ADEYTY 105
Query: 82 VGLMGEASMLFAVMPEKNCVSWSAMVSG--------------YVACGDLDAAVECFYAAP 127
L+ S L + K CV + +G Y + G + A + F
Sbjct: 106 APLLKSCSSLSDLRFGK-CVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMS 164
Query: 128 VRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKS 187
R+V+ W MI G+ G VE LF++MS +++V+WN+MI+ + GR + L+LF
Sbjct: 165 ERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCE 224
Query: 188 MLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSD-TTAGTSLISMYAKCG 246
M++ G P+ ++ +VL ++L L GK +H S L D T G +L+ Y K G
Sbjct: 225 MIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSG 284
Query: 247 DLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDG-MKPDWITFVAVL 305
DL+ A +F ++ R+++VSWN +ISG A +G GE + LFD M +G + P+ TF+ VL
Sbjct: 285 DLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVL 344
Query: 306 LACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPH 365
C++ G V+ G + F +M+ F ++ + EHY MVDL+ R+GR+ EA +K+MP +
Sbjct: 345 ACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNAN 404
Query: 366 PAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRS 425
A++G+LL ACR H ++ LAE AA L++++P ++ YV L+N+YA + RW+ V ++R
Sbjct: 405 AAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTL 464
Query: 426 MKENKVVKAPGYSWI 440
MK+N++ K+ G S I
Sbjct: 465 MKKNRLRKSTGQSTI 479
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 129/269 (47%), Gaps = 12/269 (4%)
Query: 21 GNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYA 80
G A+++F+++ E N V +N+M+ V F +M + SWN+MIS +
Sbjct: 151 GRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLS 210
Query: 81 QVGLMGEASMLFAVM------PEKNCVSWSAMVSGYVACGDLDAAVECFYAAP--VRSVI 132
+ G EA LF M P++ V +S + D + + + I
Sbjct: 211 KCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFI 270
Query: 133 T-WTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLES 191
T A++ Y K G +E+A +FR+M + +V+WN +I+G NG+ E G+ LF +M+E
Sbjct: 271 TVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEE 330
Query: 192 G-AKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKS-PLSSDTTAGTSLISMYAKCGDLK 249
G PN + VL CS ++ G+++ L+ + L + T +++ + ++ G +
Sbjct: 331 GKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRIT 390
Query: 250 EAWELFVQIP-RKDIVSWNAMISGYAQHG 277
EA++ +P + W +++S HG
Sbjct: 391 EAFKFLKNMPVNANAAMWGSLLSACRSHG 419
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 101/243 (41%), Gaps = 37/243 (15%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKI------PEPNTVSYNIMLACHLHHFGV 54
M +S V+WNS++S+ + K G +A +LF ++ P+ TV + ++ L
Sbjct: 194 MSERSIVSWNSMISSLS-KCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDT 252
Query: 55 G--------SARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAM 106
G S+ F D + V N ++ Y + G + A+ +F M +N VSW+ +
Sbjct: 253 GKWIHSTAESSGLFKDFITVG-----NALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTL 307
Query: 107 VSGYVACGD-------LDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSL 159
+SG G DA +E AP + Y G+VE E LF M
Sbjct: 308 ISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYT--GQVERGEELFGLMME 365
Query: 160 KTLVT-----WNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQ 214
+ + + AM+ +GR + K K+M NA S+L C + ++
Sbjct: 366 RFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNM---PVNANAAMWGSLLSACRSHGDVK 422
Query: 215 LGK 217
L +
Sbjct: 423 LAE 425
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 261 bits (667), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 158/461 (34%), Positives = 243/461 (52%), Gaps = 44/461 (9%)
Query: 42 NIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVM----PE 97
N +++ + +G AR FDRM +D SWN +I+ YA G+ EA LF M E
Sbjct: 183 NALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVE 242
Query: 98 KNCVSWSAMVSG------YVACGDLDAAVECFYAA--PVRSVITWTA------------- 136
+ ++W+ + G YV L + + F + PV +I A
Sbjct: 243 VSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEI 302
Query: 137 ------------------MITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRA 178
+IT Y K + A +FR+ +L TWN++I+GY + ++
Sbjct: 303 HGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKS 362
Query: 179 EDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSD-TTAGTS 237
E+ L + ML +G +PN+++L S+L C+ ++ LQ GK+ H + + D T S
Sbjct: 363 EEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNS 422
Query: 238 LISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPD 297
L+ +YAK G + A ++ + ++D V++ ++I GY G G AL LF EM G+KPD
Sbjct: 423 LVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPD 482
Query: 298 WITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLI 357
+T VAVL AC+H+ LV G + F M ++GI+ +H++CMVDL GRAG L +A D+I
Sbjct: 483 HVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDII 542
Query: 358 KSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWE 417
+MP+KP A + TLL AC IH N + ++AA+ LLE+ P + YV +AN+YAA W
Sbjct: 543 HNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWS 602
Query: 418 HVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPE 458
+A +R M++ V K PG +WI+ S F D PE
Sbjct: 603 KLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPE 643
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 152/343 (44%), Gaps = 49/343 (14%)
Query: 57 ARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSGYVA 112
A++ + ++ WN +I+ YA+ L E + M K + ++ +++ A
Sbjct: 97 AQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLK---A 153
Query: 113 CGD-LDAAVECFYAAPVR------SVITWTAMITGYMKFGRVESAERLFREMSLKTLVTW 165
CG+ LD A + S+ A+I+ Y +F + A RLF M + V+W
Sbjct: 154 CGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSW 213
Query: 166 NAMIAGYVENGRAEDGLKLFKSMLESGAK------------------------------- 194
NA+I Y G + +LF M SG +
Sbjct: 214 NAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRN 273
Query: 195 -PNALSLTSVLLG---CSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKE 250
P +L ++++G CS + A++LGK++H L S +LI+MY+KC DL+
Sbjct: 274 FPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRH 333
Query: 251 AWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNH 310
A +F Q + +WN++ISGYAQ E+A HL EM G +P+ IT ++L C
Sbjct: 334 ALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCAR 393
Query: 311 AGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEA 353
+ G ++ ++R K + +VD+ ++G++ A
Sbjct: 394 IANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAA 436
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 108/250 (43%), Gaps = 35/250 (14%)
Query: 137 MITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPN 196
++T Y F A+ + + + WN +IA Y +N E+ + +K M+ G +P+
Sbjct: 84 LVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPD 143
Query: 197 ALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFV 256
A + SVL C + G+ VH + S S +LISMY + ++ A LF
Sbjct: 144 AFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFD 203
Query: 257 QIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDL 316
++ +D VSWNA+I+ YA G +A LFD+M G++ IT+ + C G
Sbjct: 204 RMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTG---- 259
Query: 317 GVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFG----TL 372
+Y + L+ R P ++D P I G +L
Sbjct: 260 -------------------NYVGALGLISRMRNFPTSLD--------PVAMIIGLKACSL 292
Query: 373 LGACRIHKNL 382
+GA R+ K +
Sbjct: 293 IGAIRLGKEI 302
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 101/231 (43%), Gaps = 20/231 (8%)
Query: 4 KSTVTWNSILSAFAKKHGNFEQARQLFEKIP---EPNTVSYNIMLACHLHHFGVGSARAF 60
S TWNSI+S +A+ + + E + L E + +PN+++ +L + + F
Sbjct: 344 NSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEF 403
Query: 61 ----FDRMEVKD-TASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGD 115
R KD T WN+++ YA+ G + A + +M +++ V++++++ GY G+
Sbjct: 404 HCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGE 463
Query: 116 LDAAVECFYAAPVRSV----ITWTAMITGYMKFGRVESAERLFREMSLK-----TLVTWN 166
A+ F + +T A+++ V ERLF +M + L ++
Sbjct: 464 GGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFS 523
Query: 167 AMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGK 217
M+ Y G + +M KP+ + ++L C Q+GK
Sbjct: 524 CMVDLYGRAGFLAKAKDIIHNM---PYKPSGATWATLLNACHIHGNTQIGK 571
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 261 bits (667), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 148/421 (35%), Positives = 239/421 (56%), Gaps = 16/421 (3%)
Query: 35 EPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASM---- 90
E T+ N + + G+A F+ +E KD +WNTMIS Y Q L G+++M
Sbjct: 320 EKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKL-GKSAMSVYK 378
Query: 91 ---LFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPVRSVITWT-AMITGYMKFGR 146
+ V P++ ++ ++++ + L+ C + S I + A+I+ Y K G+
Sbjct: 379 RMHIIGVKPDE--FTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQ 436
Query: 147 VESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAK--PNALSLTSVL 204
+E A+ LF K L++WNA+I+G+ NG +GL+ F +LES + P+A +L+++L
Sbjct: 437 IEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLL 496
Query: 205 LGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIV 264
C + S+L LG Q H V + +T G +LI+MY++CG ++ + E+F Q+ KD+V
Sbjct: 497 SICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVV 556
Query: 265 SWNAMISGYAQHGAGEKALHLFDEMRHDG-MKPDWITFVAVLLACNHAGLVDLGVQYFNM 323
SWN++IS Y++HG GE A++ + M+ +G + PD TF AVL AC+HAGLV+ G++ FN
Sbjct: 557 SWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNS 616
Query: 324 MVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIK--SMPFKPHPAIFGTLLGACRIHKN 381
MV G+ +H++C+VDLLGRAG L EA L+K ++ L AC H +
Sbjct: 617 MVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGD 676
Query: 382 LDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIE 441
L L + AK L+E + + YVQL+N+YA W+ RR++ +K G SW+
Sbjct: 677 LKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCSWMR 736
Query: 442 I 442
+
Sbjct: 737 L 737
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 174/363 (47%), Gaps = 30/363 (8%)
Query: 10 NSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRM-EVKD 68
N++LS + ++ GN ++ F++I EP+ S+ +L+ + A FD+M E D
Sbjct: 96 NTLLSLY-ERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDD 154
Query: 69 TASWNTMISGYAQVGLMGEASMLFAVMPE---KNCVSWSAMVSGYVACGDLDAAVEC--- 122
A WN MI+G + G + LF M + ++ A + G LD +
Sbjct: 155 VAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGSLDFGKQVHSL 214
Query: 123 -----FYAAPVRSVITWTAMITGYMKFGRVESAERLFRE--MSLKTLVTWNAMIAGYVEN 175
F+ A SV+ A+IT Y V A +F E ++++ VT+N +I G
Sbjct: 215 VIKAGFFIAS--SVVN--ALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGF 270
Query: 176 GRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAG 235
R E L +F+ MLE+ +P L+ SV+ CS +G QVH L K+ T
Sbjct: 271 KRDE-SLLVFRKMLEASLRPTDLTFVSVMGSCS---CAAMGHQVHGLAIKTGYEKYTLVS 326
Query: 236 TSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMK 295
+ ++MY+ D A ++F + KD+V+WN MIS Y Q G+ A+ ++ M G+K
Sbjct: 327 NATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVK 386
Query: 296 PDWITFVAVLLACNHAGLVDLGV-QYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAV 354
PD TF ++L A +DL V + + FG+ +K E ++ + G++ +A
Sbjct: 387 PDEFTFGSLL-----ATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKA- 440
Query: 355 DLI 357
DL+
Sbjct: 441 DLL 443
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 84/184 (45%), Gaps = 5/184 (2%)
Query: 161 TLVTWNAMIAGYVENGRAEDGLKLFKSMLE-SGAKPNALSLTSVLLGCSNLSALQLGKQV 219
TL+ N + G +G + LKLF + + +P+ S++ + +L G QV
Sbjct: 20 TLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQV 79
Query: 220 HQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAG 279
H +S L + +L+S+Y + G+L + F +I D+ SW ++S + G
Sbjct: 80 HCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDI 139
Query: 280 EKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYAC 339
E A +FD+M + D + A++ C +G + V+ F M G++ +A
Sbjct: 140 EYAFEVFDKMPE---RDDVAIWNAMITGCKESGYHETSVELFREM-HKLGVRHDKFGFAT 195
Query: 340 MVDL 343
++ +
Sbjct: 196 ILSM 199
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 124/287 (43%), Gaps = 55/287 (19%)
Query: 10 NSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHH-FGVGSARAFFDRME--- 65
N+++SA++K +G E+A LFE+ N +S+N +++ H+ F F +E
Sbjct: 425 NALISAYSK-NGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEV 483
Query: 66 --VKDTASWNTMISGYAQVGLMGEASMLFAVMPE----KNCVSWSAMVSGYVACGDLDAA 119
+ D + +T++S + S A + K + +A+++ Y CG + +
Sbjct: 484 RILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNS 543
Query: 120 VECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMS-----LKTLVTWNAMIAGYVE 174
+E F + V++W ++I+ Y + G E+A ++ M + T++A+++
Sbjct: 544 LEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSH 603
Query: 175 NGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTA 234
G E+GL++F SM+E V+ + V C
Sbjct: 604 AGLVEEGLEIFNSMVE---------FHGVI------------RNVDHFSC---------- 632
Query: 235 GTSLISMYAKCGDLKEAWELFVQIPRKDIVS----WNAMISGYAQHG 277
L+ + + G L EA E V+I K I S W A+ S A HG
Sbjct: 633 ---LVDLLGRAGHLDEA-ESLVKISEKTIGSRVDVWWALFSACAAHG 675
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 119/269 (44%), Gaps = 21/269 (7%)
Query: 4 KSTVTWNSILSAFAKKHGNFEQARQ---LFEK----IPEPNTVSYNIMLACHLHHFGVGS 56
K+ ++WN+I+S F FE + L E +P+ T+S + + +GS
Sbjct: 450 KNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGS 509
Query: 57 -ARAFFDRM-EVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACG 114
A+ R + K+T N +I+ Y+Q G + + +F M EK+ VSW++++S Y G
Sbjct: 510 QTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHG 569
Query: 115 DLDAAVECFYAAP-----VRSVITWTAMITGYMKFGRVESAERLFREM-----SLKTLVT 164
+ + AV + + T++A+++ G VE +F M ++ +
Sbjct: 570 EGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDH 629
Query: 165 WNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVC 224
++ ++ G ++ L K + E ++ C+ L+LGK V +L+
Sbjct: 630 FSCLVDLLGRAGHLDEAESLVK-ISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLM 688
Query: 225 KSPLSSDTTAGTSLISMYAKCGDLKEAWE 253
+ D + L ++YA G KEA E
Sbjct: 689 EKE-KDDPSVYVQLSNIYAGAGMWKEAEE 716
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 139/400 (34%), Positives = 226/400 (56%), Gaps = 30/400 (7%)
Query: 60 FFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVM------PEKN--------CVSWSA 105
F + KD A W +MISG+ + G + EA LF+ M P+++ C S +
Sbjct: 507 LFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPS 566
Query: 106 M-----VSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLK 160
+ + GY +D ++ +A++ Y K G ++ A +++ +
Sbjct: 567 LPRGKEIHGYTLRAGIDKGMD-----------LGSALVNMYSKCGSLKLARQVYDRLPEL 615
Query: 161 TLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVH 220
V+ +++I+GY ++G +DG LF+ M+ SG ++ +++S+L + LG QVH
Sbjct: 616 DPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVH 675
Query: 221 QLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGE 280
+ K L ++ + G+SL++MY+K G + + + F QI D+++W A+I+ YAQHG
Sbjct: 676 AYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKAN 735
Query: 281 KALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACM 340
+AL +++ M+ G KPD +TFV VL AC+H GLV+ + N MV+D+GI+ + HY CM
Sbjct: 736 EALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCM 795
Query: 341 VDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSA 400
VD LGR+GRL EA I +M KP ++GTLL AC+IH ++L + AAK +EL+PS A
Sbjct: 796 VDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDA 855
Query: 401 TGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWI 440
Y+ L+N+ A W+ V R+ MK V K PG+S +
Sbjct: 856 GAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 135/272 (49%), Gaps = 15/272 (5%)
Query: 54 VGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMP----EKNCVSWSAMVSG 109
+ A FD + D S N MISGY Q L E+ F+ M E N +S+ +++S
Sbjct: 100 MADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVIS- 158
Query: 110 YVACGDLDAA----VECFYAAPVRSV---ITWTAMITGYMKFGRVESAERLFREMSLKTL 162
AC L A + C + + + +A+I + K R E A ++FR+ +
Sbjct: 159 --ACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANV 216
Query: 163 VTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQL 222
WN +IAG + N LF M KP++ + +SVL C++L L+ GK V
Sbjct: 217 YCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQAR 276
Query: 223 VCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKA 282
V K + D T+++ +YAKCG + EA E+F +IP +VSW M+SGY + A
Sbjct: 277 VIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSA 335
Query: 283 LHLFDEMRHDGMKPDWITFVAVLLACNHAGLV 314
L +F EMRH G++ + T +V+ AC +V
Sbjct: 336 LEIFKEMRHSGVEINNCTVTSVISACGRPSMV 367
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 171/395 (43%), Gaps = 66/395 (16%)
Query: 19 KHGNFEQARQLFEK---IPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTM 75
K G+ + + Q+FE I N V N+M+ G A F RM
Sbjct: 398 KSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRM----------- 444
Query: 76 ISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPVRSVITWT 135
Q GL + + +++ +C++ V GY L V + +
Sbjct: 445 ----LQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGL-----------VLDLTVGS 489
Query: 136 AMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKP 195
++ T Y K G +E + +LF+ + K W +MI+G+ E G + + LF ML+ G P
Sbjct: 490 SLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSP 549
Query: 196 NALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELF 255
+ +L +VL CS+ +L GK++H ++ + G++L++MY+KCG LK A +++
Sbjct: 550 DESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVY 609
Query: 256 VQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVD 315
++P D VS +++ISGY+QHG + LF +M G D ++L A +
Sbjct: 610 DRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESS 669
Query: 316 LGVQYFNMMVRDFGIKTKPEHYACMV----------------------DLL--------- 344
LG Q + + G+ T+P + ++ DL+
Sbjct: 670 LGAQ-VHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASY 728
Query: 345 ---GRAGRLPEAVDLIKSMPFKPHPAIFGTLLGAC 376
G+A + +L+K FKP F +L AC
Sbjct: 729 AQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSAC 763
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 190/417 (45%), Gaps = 74/417 (17%)
Query: 7 VTWNSILSAFAKKHGNFEQARQLFEKIP----EPNTVSYNIMLA---------------C 47
V+ N ++S + K+H FE++ + F K+ E N +SY +++ C
Sbjct: 116 VSCNIMISGY-KQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCC 174
Query: 48 HLHHFG------VGSARA--------FFDRMEV-KDTAS-----WNTMISGYAQVGLMGE 87
H G V SA F D +V +D+ S WNT+I+G + G
Sbjct: 175 HTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGA 234
Query: 88 ASMLFAVM----PEKNCVSWSAMVSGYVACGDLDA----------AVECFYAAPVRSVIT 133
LF M + + ++S++++ AC L+ ++C V
Sbjct: 235 VFDLFHEMCVGFQKPDSYTYSSVLA---ACASLEKLRFGKVVQARVIKC----GAEDVFV 287
Query: 134 WTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGA 193
TA++ Y K G + A +F + ++V+W M++GY ++ A L++FK M SG
Sbjct: 288 CTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGV 347
Query: 194 KPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDL---KE 250
+ N ++TSV+ C S + QVH V KS D++ +LISMY+K GD+ ++
Sbjct: 348 EINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQ 407
Query: 251 AWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVL--LAC 308
+E I R++IV N MI+ ++Q KA+ LF M +G++ D + ++L L C
Sbjct: 408 VFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDC 465
Query: 309 NHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPH 365
+ G G + +V D + + + L + G L E+ L + +PFK +
Sbjct: 466 LNLGKQVHGYTLKSGLVLDLTVGSS------LFTLYSKCGSLEESYKLFQGIPFKDN 516
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 111/237 (46%), Gaps = 14/237 (5%)
Query: 128 VRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKS 187
+S+++W Y G + A +LF + +V+ N MI+GY ++ E+ L+ F
Sbjct: 87 TKSLLSW------YSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSK 140
Query: 188 MLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGD 247
M G + N +S SV+ CS L A + V K ++LI +++K
Sbjct: 141 MHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLR 200
Query: 248 LKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLA 307
++A+++F ++ WN +I+G ++ LF EM KPD T+ +VL A
Sbjct: 201 FEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAA 260
Query: 308 CNHAGLVDLGVQYFNMMVRDFGIKTKPEH-YAC--MVDLLGRAGRLPEAVDLIKSMP 361
C A L L F +V+ IK E + C +VDL + G + EA+++ +P
Sbjct: 261 C--ASLEKL---RFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIP 312
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 48/79 (60%)
Query: 231 DTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMR 290
D SL+S Y+ G + +A +LF IP+ D+VS N MISGY QH E++L F +M
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 291 HDGMKPDWITFVAVLLACN 309
G + + I++ +V+ AC+
Sbjct: 143 FLGFEANEISYGSVISACS 161
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 259 bits (663), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 138/396 (34%), Positives = 225/396 (56%), Gaps = 9/396 (2%)
Query: 56 SARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKN-CVSWSAMVSGYVACG 114
SA+ FD + V+++ W ++ GY + E LF +M + + ++ ACG
Sbjct: 162 SAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACG 221
Query: 115 DLDAAV--ECFYAAPVR------SVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWN 166
++ A +C + +R S ++I Y+K +++A +LF + +V W
Sbjct: 222 NVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWT 281
Query: 167 AMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKS 226
+I+G+ + RA + LF+ ML PN +L ++L+ CS+L +L+ GK VH + ++
Sbjct: 282 TLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRN 341
Query: 227 PLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLF 286
+ D TS I MYA+CG+++ A +F +P ++++SW++MI+ + +G E+AL F
Sbjct: 342 GIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCF 401
Query: 287 DEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGR 346
+M+ + P+ +TFV++L AC+H+G V G + F M RD+G+ + EHYACMVDLLGR
Sbjct: 402 HKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGR 461
Query: 347 AGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQL 406
AG + EA I +MP KP + +G LL ACRIHK +DLA A+ LL ++P ++ YV L
Sbjct: 462 AGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLL 521
Query: 407 ANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEI 442
+N+YA WE V +RR M K G S E+
Sbjct: 522 SNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATEV 557
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 157/331 (47%), Gaps = 40/331 (12%)
Query: 57 ARAFFDRMEV--KDTASWNTMISGYAQVGLMGEASMLF----------------AVMPEK 98
A + F+R+ ++ SWNT++SGY++ + +L V K
Sbjct: 58 ATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIK 117
Query: 99 NCVSWSAMVSGYVACG-------DLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAE 151
CV + +G + G D D Y AP +++ Y + G +ESA+
Sbjct: 118 ACVGLGLLENGILIHGLAMKNGLDKDD-----YVAP--------SLVEMYAQLGTMESAQ 164
Query: 152 RLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLS 211
++F E+ ++ V W ++ GY++ + + +LF M ++G +AL+L ++ C N+
Sbjct: 165 KVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVF 224
Query: 212 ALQLGKQVHQL-VCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMI 270
A ++GK VH + + +S + S+I MY KC L A +LF +++V W +I
Sbjct: 225 AGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLI 284
Query: 271 SGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGI 330
SG+A+ +A LF +M + + P+ T A+L++C+ G + G M+R+ GI
Sbjct: 285 SGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRN-GI 343
Query: 331 KTKPEHYACMVDLLGRAGRLPEAVDLIKSMP 361
+ ++ +D+ R G + A + MP
Sbjct: 344 EMDAVNFTSFIDMYARCGNIQMARTVFDMMP 374
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 107/233 (45%), Gaps = 4/233 (1%)
Query: 131 VITWTAMITGYMKFGRVESAERLFREMSL--KTLVTWNAMIAGYVENGRA--EDGLKLFK 186
V+ +++ Y++ R++ A F + + +WN +++GY ++ D L L+
Sbjct: 39 VVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYN 98
Query: 187 SMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCG 246
M ++ +L + C L L+ G +H L K+ L D SL+ MYA+ G
Sbjct: 99 RMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLG 158
Query: 247 DLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLL 306
++ A ++F +IP ++ V W ++ GY ++ + LF MR G+ D +T + ++
Sbjct: 159 TMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVK 218
Query: 307 ACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKS 359
AC + +G + +R I A ++D+ + L A L ++
Sbjct: 219 ACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFET 271
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 129/294 (43%), Gaps = 40/294 (13%)
Query: 4 KSTVTWNSILSAFAKKH---GNFEQARQLFEKIPEPNTVSY-NIMLACHLHHFGVGSAR- 58
++ V W +++S FAK F+ RQ+ + PN + I+++C +GS R
Sbjct: 275 RNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCS----SLGSLRH 330
Query: 59 -----AFFDRMEVK-DTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVA 112
+ R ++ D ++ + I YA+ G + A +F +MPE+N +SWS+M++ +
Sbjct: 331 GKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGI 390
Query: 113 CGDLDAAVECFYAAPVRSV----ITWTAMITGYMKFGRVESAERLFREMSLKTLVT---- 164
G + A++CF+ ++V +T+ ++++ G V+ + F M+ V
Sbjct: 391 NGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEE 450
Query: 165 -WNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQL-GKQVHQL 222
+ M+ G + +M KP A + ++L C + L G+ +L
Sbjct: 451 HYACMVDLLGRAGEIGEAKSFIDNM---PVKPMASAWGALLSACRIHKEVDLAGEIAEKL 507
Query: 223 VCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQH 276
+ P ++ L ++YA G WE+ + RK I GY +H
Sbjct: 508 LSMEP--EKSSVYVLLSNIYADAG----MWEMVNCVRRK------MGIKGYRKH 549
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 259 bits (661), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 151/516 (29%), Positives = 257/516 (49%), Gaps = 58/516 (11%)
Query: 4 KSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDR 63
+ V+WNS++S + + G E+ L K+ L L + F ++
Sbjct: 212 RDQVSWNSLISGYVRV-GAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEK 270
Query: 64 ------------MEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYV 111
ME D ++ YA+ G + EA LF++MP KN V+++AM+SG++
Sbjct: 271 GMAIHCYTAKLGMEF-DIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFL 329
Query: 112 ACGDL--DAAVECF--------------------------------YAAPVRSVI----- 132
++ +A+ E F Y + ++I
Sbjct: 330 QMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNF 389
Query: 133 -----TWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKS 187
+A+I Y G E + F S + + +W +MI +V+N + E LF+
Sbjct: 390 QSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQ 449
Query: 188 MLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGD 247
+ S +P +++ ++ C++ +AL G+Q+ KS + + T+ TS ISMYAK G+
Sbjct: 450 LFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGN 509
Query: 248 LKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLA 307
+ A ++F+++ D+ +++AMIS AQHG+ +AL++F+ M+ G+KP+ F+ VL+A
Sbjct: 510 MPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIA 569
Query: 308 CNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPA 367
C H GLV G++YF M D+ I +H+ C+VDLLGR GRL +A +LI S F+ HP
Sbjct: 570 CCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPV 629
Query: 368 IFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMK 427
+ LL +CR++K+ + + A+ L+EL+P ++ YV L N+Y +R M+
Sbjct: 630 TWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMR 689
Query: 428 ENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIH 463
+ V K P SWI I ++ H F +D HP I+
Sbjct: 690 DRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIY 725
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 99/291 (34%), Positives = 147/291 (50%), Gaps = 18/291 (6%)
Query: 54 VGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVA- 112
+G AR FDRM ++ S+N++ISGY Q+G +A LF E N +G +
Sbjct: 98 LGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGF 157
Query: 113 CG---DLDAAVECFYAAPV-----RSVITWTAMITGYMKFGRVESAERLFREMSLKTLVT 164
CG DLD E + V + V +I Y K G+++ A LF + V+
Sbjct: 158 CGERCDLDLG-ELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVS 216
Query: 165 WNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCS---NLSALQLGKQVHQ 221
WN++I+GYV G AE+ L L M G +L SVL C N ++ G +H
Sbjct: 217 WNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHC 276
Query: 222 LVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHG---- 277
K + D T+L+ MYAK G LKEA +LF +P K++V++NAMISG+ Q
Sbjct: 277 YTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITD 336
Query: 278 -AGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRD 327
A +A LF +M+ G++P TF VL AC+ A ++ G Q ++ ++
Sbjct: 337 EASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKN 387
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/439 (24%), Positives = 200/439 (45%), Gaps = 68/439 (15%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPN----TVSY--------------- 41
M ++ +++NS++S + + G +EQA +LF + E N +Y
Sbjct: 108 MPERNIISFNSLISGYTQM-GFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDL 166
Query: 42 --------------------NIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQ 81
N+++ + + A + FDR + +D SWN++ISGY +
Sbjct: 167 GELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVR 226
Query: 82 VGLMGEASMLFAVMPEKNCVSWSAMVSGYV---ACGDLDA-------AVECFYA--APVR 129
VG E L A M ++ ++ + G V C +L+ A+ C+ A
Sbjct: 227 VGAAEEPLNLLAKM-HRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEF 285
Query: 130 SVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAED-----GLKL 184
++ TA++ Y K G ++ A +LF M K +VT+NAMI+G+++ D KL
Sbjct: 286 DIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKL 345
Query: 185 FKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAK 244
F M G +P+ + + VL CS L+ G+Q+H L+CK+ SD G++LI +YA
Sbjct: 346 FMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYAL 405
Query: 245 CGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAV 304
G ++ + F ++DI SW +MI + Q+ E A LF ++ ++P+ T +
Sbjct: 406 MGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLM 465
Query: 305 LLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACM----VDLLGRAGRLPEAVDLIKSM 360
+ AC + G Q ++ + IK+ + + + + + ++G +P A + +
Sbjct: 466 MSACADFAALSSGEQ-----IQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEV 520
Query: 361 PFKPHPAIFGTLLGACRIH 379
P A + ++ + H
Sbjct: 521 Q-NPDVATYSAMISSLAQH 538
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 135/285 (47%), Gaps = 16/285 (5%)
Query: 141 YMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSL 200
Y K + A +LF M + ++++N++I+GY + G E ++LF E+ K + +
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTY 151
Query: 201 TSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPR 260
L C L LG+ +H LV + LS LI MY+KCG L +A LF +
Sbjct: 152 AGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDE 211
Query: 261 KDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACN---HAGLVDLG 317
+D VSWN++ISGY + GA E+ L+L +M DG+ +VL AC + G ++ G
Sbjct: 212 RDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKG 271
Query: 318 VQ---YFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLG 374
+ Y + +F I + ++D+ + G L EA+ L MP K + G
Sbjct: 272 MAIHCYTAKLGMEFDIVVR----TALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISG 327
Query: 375 ACRIHKNLDLAEFAAKNLL------ELDPSSATGYVQLANVYAAQ 413
++ + D A A L L+PS +T V L AA+
Sbjct: 328 FLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAK 372
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 79/142 (55%), Gaps = 1/142 (0%)
Query: 215 LGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYA 274
LGK H + KS L+ +L++MY KC +L A +LF ++P ++I+S+N++ISGY
Sbjct: 65 LGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYT 124
Query: 275 QHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKP 334
Q G E+A+ LF E R +K D T+ L C +DLG ++V + G+ +
Sbjct: 125 QMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVN-GLSQQV 183
Query: 335 EHYACMVDLLGRAGRLPEAVDL 356
++D+ + G+L +A+ L
Sbjct: 184 FLINVLIDMYSKCGKLDQAMSL 205
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 259 bits (661), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 141/377 (37%), Positives = 221/377 (58%), Gaps = 8/377 (2%)
Query: 73 NTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPVR--- 129
+++I Y++ G +G A +F+ + E++ V ++AM+SGY D A+ +
Sbjct: 156 SSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIK 215
Query: 130 -SVITWTAMITGYMKFGRVESAERLFREMSLK----TLVTWNAMIAGYVENGRAEDGLKL 184
VITW A+I+G+ E + M L +V+W ++I+G V N + E
Sbjct: 216 PDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDA 275
Query: 185 FKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAK 244
FK ML G PN+ ++ ++L C+ L+ ++ GK++H + L ++L+ MY K
Sbjct: 276 FKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGK 335
Query: 245 CGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAV 304
CG + EA LF + P+K V++N+MI YA HG +KA+ LFD+M G K D +TF A+
Sbjct: 336 CGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAI 395
Query: 305 LLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKP 364
L AC+HAGL DLG F +M + I + EHYACMVDLLGRAG+L EA ++IK+M +P
Sbjct: 396 LTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEP 455
Query: 365 HPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRR 424
++G LL ACR H N++LA AAK+L EL+P ++ + L ++YA WE V R+++
Sbjct: 456 DLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESVVRMKK 515
Query: 425 SMKENKVVKAPGYSWIE 441
+K+ + + G SW+E
Sbjct: 516 MIKKKRFRRFLGSSWVE 532
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 125/243 (51%), Gaps = 4/243 (1%)
Query: 137 MITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPN 196
++T Y++ G+V A ++F EM + + MI NG ++ L F+ M + G K +
Sbjct: 57 LVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLD 116
Query: 197 ALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFV 256
A + S+L NL + GK +H LV K SD +SLI MY+K G++ A ++F
Sbjct: 117 AFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFS 176
Query: 257 QIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDL 316
+ +D+V +NAMISGYA + ++AL+L +M+ G+KPD IT+ A++ +H +
Sbjct: 177 DLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEK 236
Query: 317 GVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSM---PFKPHPAIFGTLL 373
+ +M D G K + ++ L + +A D K M P+ A TLL
Sbjct: 237 VSEILELMCLD-GYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLL 295
Query: 374 GAC 376
AC
Sbjct: 296 PAC 298
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 108/239 (45%), Gaps = 7/239 (2%)
Query: 216 GKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQ 275
G+ +H + S ++ T L++ Y +CG + +A ++F ++P++DI MI A+
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACAR 94
Query: 276 HGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPE 335
+G +++L F EM DG+K D ++L A + + G + + +V F ++
Sbjct: 95 NGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFG-KMIHCLVLKFSYESDAF 153
Query: 336 HYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKN--LL 393
+ ++D+ + G + A + + + +F ++ + D A K+ LL
Sbjct: 154 IVSSLIDMYSKFGEVGNARKVFSDLG-EQDLVVFNAMISGYANNSQADEALNLVKDMKLL 212
Query: 394 ELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIE-ISSEVHEFRS 451
+ P T + L + ++ E V+ I M + K SW IS VH F++
Sbjct: 213 GIKPDVIT-WNALISGFSHMRNEEKVSEILELMCLDG-YKPDVVSWTSIISGLVHNFQN 269
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 152/482 (31%), Positives = 252/482 (52%), Gaps = 46/482 (9%)
Query: 10 NSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVK-- 67
NS+L +AK + A +F ++PE N VS+NIM+ + + F RM
Sbjct: 288 NSLLEIYAKNK-DMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGF 346
Query: 68 --DTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECF-- 123
+ + +++ + G + +F+ +P+ + +W+AM+SGY + A+ F
Sbjct: 347 QPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQ 406
Query: 124 --------------------------------YAAPVRSVIT-----WTAMITGYMKFGR 146
+ +R+ I+ + +I Y + +
Sbjct: 407 MQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEK 466
Query: 147 VESAERLFRE-MSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAK-PNALSLTSVL 204
+E +E +F + ++ + WN+MI+G+ N L LF+ M ++ PN S +VL
Sbjct: 467 MEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVL 526
Query: 205 LGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIV 264
CS L +L G+Q H LV KS SD+ T+L MY KCG++ A + F + RK+ V
Sbjct: 527 SSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTV 586
Query: 265 SWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMM 324
WN MI GY +G G++A+ L+ +M G KPD ITFV+VL AC+H+GLV+ G++ + M
Sbjct: 587 IWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSM 646
Query: 325 VRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDL 384
R GI+ + +HY C+VD LGRAGRL +A L ++ P+K ++ LL +CR+H ++ L
Sbjct: 647 QRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSL 706
Query: 385 AEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISS 444
A A+ L+ LDP S+ YV L+N Y++ +W+ A ++ M +N+V K PG SW +
Sbjct: 707 ARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSWTTYGN 766
Query: 445 EV 446
++
Sbjct: 767 DL 768
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 172/383 (44%), Gaps = 79/383 (20%)
Query: 57 ARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDL 116
AR FD M V+D SWN ++ +VG +GEA +F MPE++ VSW+ M+S V G
Sbjct: 60 ARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFE 119
Query: 117 DAAVEC-------------FYAAPV--------------------------RSVITWTAM 137
+ A+ F A V +++ A+
Sbjct: 120 EKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNAL 179
Query: 138 ITGYMKFGR-VESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPN 196
++ Y K G V+ R+F +S V++ A+I G + + +++F+ M E G + +
Sbjct: 180 LSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVD 239
Query: 197 ALSLTSVLL------GCSNLSAL---QLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGD 247
++ L+++L GC +LS + +LGKQ+H L + D SL+ +YAK D
Sbjct: 240 SVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKD 299
Query: 248 LKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLA 307
+ A +F ++P ++VSWN MI G+ Q +K++ MR G +P+ +T ++VL A
Sbjct: 300 MNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGA 359
Query: 308 CNHAGLVDLGVQYF-----------NMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDL 356
C +G V+ G + F N M+ + + EHY EA+
Sbjct: 360 CFRSGDVETGRRIFSSIPQPSVSAWNAMLSGY---SNYEHY-------------EEAISN 403
Query: 357 IKSMPF---KPHPAIFGTLLGAC 376
+ M F KP +L +C
Sbjct: 404 FRQMQFQNLKPDKTTLSVILSSC 426
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 113/462 (24%), Positives = 196/462 (42%), Gaps = 91/462 (19%)
Query: 4 KSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDR 63
K+ N++LS +AK + ++FE + +PN VSY ++ V A F
Sbjct: 171 KNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRL 230
Query: 64 MEVK----DTASWNTMISGYA-------------------------QVGLMGE------- 87
M K D+ + ++S A ++G G+
Sbjct: 231 MCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSL 290
Query: 88 ------------ASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPVR------ 129
A ++FA MPE N VSW+ M+ G+ D +VE + +R
Sbjct: 291 LEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVE--FLTRMRDSGFQP 348
Query: 130 SVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSML 189
+ +T +++ + G VE+ R+F + ++ WNAM++GY E+ + F+ M
Sbjct: 349 NEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQ 408
Query: 190 ESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLK 249
KP+ +L+ +L C+ L L+ GKQ+H +V ++ +S ++ + LI++Y++C ++
Sbjct: 409 FQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKME 468
Query: 250 EAWELFVQ-IPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDG-MKPDWITFVAVLLA 307
+ +F I DI WN+MISG+ + KAL LF M + P+ +F VL +
Sbjct: 469 ISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSS 528
Query: 308 CNHAGLVDLGVQYFNMMVR-----DFGIKTKPEHYAC----------------------- 339
C+ + G Q+ ++V+ D ++T C
Sbjct: 529 CSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIW 588
Query: 340 --MVDLLGRAGRLPEAVDLIKSMPF---KPHPAIFGTLLGAC 376
M+ G GR EAV L + M KP F ++L AC
Sbjct: 589 NEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTAC 630
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 101/197 (51%), Gaps = 1/197 (0%)
Query: 110 YVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMI 169
Y+ CGD D A + F VR V +W A +T K G + A +F M + +V+WN MI
Sbjct: 51 YIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMI 110
Query: 170 AGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLS 229
+ V G E L ++K M+ G P+ +L SVL CS + G + H + K+ L
Sbjct: 111 SVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLD 170
Query: 230 SDTTAGTSLISMYAKCGDLKE-AWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDE 288
+ G +L+SMYAKCG + + +F + + + VS+ A+I G A+ +A+ +F
Sbjct: 171 KNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRL 230
Query: 289 MRHDGMKPDWITFVAVL 305
M G++ D + +L
Sbjct: 231 MCEKGVQVDSVCLSNIL 247
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 53/125 (42%), Gaps = 31/125 (24%)
Query: 216 GKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNA------- 268
GK +H + + + SDT L+ +Y +CGD A ++F ++ +D+ SWNA
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 269 ------------------------MISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAV 304
MIS + G EKAL ++ M DG P T +V
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 305 LLACN 309
L AC+
Sbjct: 145 LSACS 149
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 145/467 (31%), Positives = 250/467 (53%), Gaps = 31/467 (6%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIPEP---NTVSYNIMLACHLHHFGVGSA 57
M K ++WN+IL AFA F+ L + E ++V+ +L ++ G+G
Sbjct: 392 MSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKV 451
Query: 58 RAFFDRMEVKDTASWNTMISGYA-QVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDL 116
+ + GY+ + GL+ + E+ +A++ Y CG++
Sbjct: 452 KE----------------VHGYSVKAGLLHD---------EEEPKLGNALLDAYAKCGNV 486
Query: 117 DAAVECFYA-APVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVEN 175
+ A + F + R+++++ ++++GY+ G + A+ LF EMS L TW+ M+ Y E+
Sbjct: 487 EYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAES 546
Query: 176 GRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAG 235
+ + +F+ + G +PN +++ ++L C+ L++L L +Q H + + L G
Sbjct: 547 CCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGDIRLKG 606
Query: 236 TSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMK 295
T L+ +YAKCG LK A+ +F R+D+V + AM++GYA HG G++AL ++ M +K
Sbjct: 607 T-LLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIK 665
Query: 296 PDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVD 355
PD + +L AC HAGL+ G+Q ++ + G+K E YAC VDL+ R GRL +A
Sbjct: 666 PDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYS 725
Query: 356 LIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNR 415
+ MP +P+ I+GTLL AC + +DL A +LL+ + +V ++N+YAA +
Sbjct: 726 FVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAK 785
Query: 416 WEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASI 462
WE V +R MK+ ++ K G SW+E+ + + F S D HP SI
Sbjct: 786 WEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSI 832
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 140/262 (53%), Gaps = 14/262 (5%)
Query: 61 FDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVM-PEKNCVSWSAMVSGYVACGDLDAA 119
FD + KD SWN +I+G+++ +M +A F +M E +++ + + C +D
Sbjct: 181 FDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKN 240
Query: 120 VECFYAAPVRSVI---TW--------TAMITGYMKFGRVESAERLFREMSLKTLVTWNAM 168
+ C + S + +W ++++ Y++ GR+E A LF M K LV+WN +
Sbjct: 241 IACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVV 300
Query: 169 IAGYVENGRAEDGLKLFKSMLESG-AKPNALSLTSVLLGCSNLSALQLGKQVHQLVCK-S 226
IAGY N +LF +++ G P+++++ S+L C+ L+ L GK++H + + S
Sbjct: 301 IAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHS 360
Query: 227 PLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLF 286
L DT+ G +LIS YA+ GD A+ F + KDI+SWNA++ +A + L+L
Sbjct: 361 YLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLL 420
Query: 287 DEMRHDGMKPDWITFVAVLLAC 308
+ ++ + D +T +++L C
Sbjct: 421 HHLLNEAITLDSVTILSLLKFC 442
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/450 (22%), Positives = 190/450 (42%), Gaps = 103/450 (22%)
Query: 4 KSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSY----NIMLACHL--HHFGVGSA 57
K V+WN+I++ F++ + + R + EP +Y N++ C + S
Sbjct: 187 KDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSG 246
Query: 58 RAFFDRMEVKDTASW--------NTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSG 109
R + + SW N+++S Y +VG + EA+ LF M K+ VSW+ +++G
Sbjct: 247 RQIHSYVVQR---SWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAG 303
Query: 110 YVACGDLDAAVECFY-----------------AAPVRSVIT------------------- 133
Y + + A + F+ PV + +T
Sbjct: 304 YASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLL 363
Query: 134 -----WTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSM 188
A+I+ Y +FG +A F MS K +++WNA++ + ++ + L L +
Sbjct: 364 EDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHL 423
Query: 189 LESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTA---GTSLISMYAKC 245
L +++++ S+L C N+ + K+VH K+ L D G +L+ YAKC
Sbjct: 424 LNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKC 483
Query: 246 GDLKEAWELFVQIP-RKDIVSWNAMISGYAQHGAGEKALHLFDEM--------------- 289
G+++ A ++F+ + R+ +VS+N+++SGY G+ + A LF EM
Sbjct: 484 GNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIY 543
Query: 290 ----------------RHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVR----DFG 329
+ GM+P+ +T + +L C + L Q ++R D
Sbjct: 544 AESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGDIR 603
Query: 330 IKTKPEHYACMVDLLGRAGRLPEAVDLIKS 359
+K ++D+ + G L A + +S
Sbjct: 604 LK------GTLLDVYAKCGSLKHAYSVFQS 627
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 116/234 (49%), Gaps = 8/234 (3%)
Query: 136 AMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGY-VENGRAEDGLKLFKSM-LESGA 193
+++ Y K R++ +++FR+M V WN ++ G V GR + ++ FK+M
Sbjct: 61 SVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGR--ETMRFFKAMHFADEP 118
Query: 194 KPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDL-KEAW 252
KP++++ VL C L GK +H + K+ L DT G +L+SMYAK G + +A+
Sbjct: 119 KPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAY 178
Query: 253 ELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLAC---N 309
F I KD+VSWNA+I+G++++ A F M + +P++ T VL C +
Sbjct: 179 TAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMD 238
Query: 310 HAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFK 363
G Q + +V+ ++T +V R GR+ EA L M K
Sbjct: 239 KNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSK 292
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 189 LESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDL 248
L SG + V+ C+++S L G+ +H V K + + S+++MYAKC +
Sbjct: 13 LLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRM 72
Query: 249 KEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRH-DGMKPDWITFVAVLLA 307
+ ++F Q+ D V WN +++G + G + + F M D KP +TF VL
Sbjct: 73 DDCQKMFRQMDSLDPVVWNIVLTGLSV-SCGRETMRFFKAMHFADEPKPSSVTFAIVLPL 131
Query: 308 CNHAGLVDLGVQYFNMMVRDFGIKTKPE 335
C V LG Y + + IK E
Sbjct: 132 C-----VRLGDSYNGKSMHSYIIKAGLE 154
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 139/395 (35%), Positives = 208/395 (52%), Gaps = 42/395 (10%)
Query: 183 KLFKS---MLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLI 239
+L+K +L+ GA P+ + C+NL +L+ K+VH +S D +I
Sbjct: 219 RLYKDAIELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVI 278
Query: 240 SMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWI 299
SM+ +C + +A +F + KD+ SW+ M+ Y+ +G G+ ALHLF+EM G+KP+
Sbjct: 279 SMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEE 338
Query: 300 TFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKS 359
TF+ V LAC G ++ +F+ M + GI K EHY ++ +LG+ G L EA I+
Sbjct: 339 TFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRD 398
Query: 360 MPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHV 419
+PF+P + + R+H ++DL ++ + ++++DPS A
Sbjct: 399 LPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDPSKAV------------------ 440
Query: 420 ARIRRSMKENKVVKAPGYSWIEIS-----SEVHEFRSSDRLHPELASIHXXXXXXXXXXX 474
NK+ P S+ E + S + EFR+ + +
Sbjct: 441 --------INKIPTPPPKSFKETNMVTSKSRILEFRN--------LTFYKDEAKEMAAKK 484
Query: 475 XAGYVPDLEFALHDVGEELKEQLLLWHSEKLAIAYGLLKVPLGLPIRVFKNLRVCGDCHT 534
YVPD F LHD+ +E KEQ LL+HSE+LAIAYG++ P + + KNLRVCGDCH
Sbjct: 485 GVVYVPDTRFVLHDIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHN 544
Query: 535 AIKYISAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
IK +S I GR +IVRD RFHHFKDG CSC DYW
Sbjct: 545 FIKIMSKIIGRVLIVRDNKRFHHFKDGKCSCGDYW 579
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 2/143 (1%)
Query: 137 MITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPN 196
+I+ + + + A+R+F M K + +W+ M+ Y +NG +D L LF+ M + G KPN
Sbjct: 277 VISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPN 336
Query: 197 ALSLTSVLLGCSNLSALQLG-KQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELF 255
+ +V L C+ + ++ + + +S T ++ + KCG L EA +
Sbjct: 337 EETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYI 396
Query: 256 VQIPRKDIVS-WNAMISGYAQHG 277
+P + W AM + HG
Sbjct: 397 RDLPFEPTADFWEAMRNYARLHG 419
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 156/490 (31%), Positives = 251/490 (51%), Gaps = 46/490 (9%)
Query: 19 KHGNFEQARQLFEK--IPEPNTVSYNIMLACHLHHFGVGSARAFFDRM-EVKDTASWNTM 75
K G F++ +F + ++V+ N M+A + + A + F R E+ DT SWNT+
Sbjct: 172 KCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTL 231
Query: 76 ISGYAQVGLMGEASMLFAVMPEKNCVSW-------------------------------- 103
I+GYAQ G EA + AV E+N + W
Sbjct: 232 IAGYAQNGYEEEA-LKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNG 290
Query: 104 --------SAMVSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFR 155
S +V Y CG++ A ++ + ++MI GY G++ A+RLF
Sbjct: 291 SYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFD 350
Query: 156 EMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAK-PNALSLTSVLLGCSNLSALQ 214
+S K LV W AM GY+ + + L+L ++ + + P++L + SVL CS + ++
Sbjct: 351 SLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYME 410
Query: 215 LGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYA 274
GK++H ++ + D T+ + MY+KCG+++ A +F +D V +NAMI+G A
Sbjct: 411 PGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCA 470
Query: 275 QHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKP 334
HG K+ F++M G KPD ITF+A+L AC H GLV G +YF M+ + I +
Sbjct: 471 HHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPET 530
Query: 335 EHYACMVDLLGRAGRLPEAVDLIKSM-PFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLL 393
HY CM+DL G+A RL +A++L++ + + I G L AC +KN +L + + LL
Sbjct: 531 GHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLL 590
Query: 394 ELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSD 453
++ S+ + Y+Q+AN YA+ RW+ + RIR M+ ++ G SW I + H F SSD
Sbjct: 591 VIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSD 650
Query: 454 RLHPELASIH 463
H E +I+
Sbjct: 651 ISHYETEAIY 660
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 113/455 (24%), Positives = 196/455 (43%), Gaps = 84/455 (18%)
Query: 5 STVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFF--D 62
+ V+ N +++ ++K G +AR +F+++ E N S+N ++A ++ V AR F D
Sbjct: 22 TAVSSNQLVNLYSKS-GLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESD 80
Query: 63 RMEVKDTASWNTMISGYAQV-GLMGEASMLFAVM--PEKNCV------------------ 101
E +D ++NT++SG+A+ G EA +F M EK+ +
Sbjct: 81 NCE-RDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLT 139
Query: 102 ----------------------SWSAMVSGYVACGDLDAAVECFYAAPVRSV--ITWTAM 137
+ S+++ Y CG F + V V + AM
Sbjct: 140 NVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAM 199
Query: 138 ITGYMKFGRVESAERLF-REMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPN 196
I Y + G ++ A +F R L ++WN +IAGY +NG E+ LK+ SM E+G K +
Sbjct: 200 IAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWD 259
Query: 197 ALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLK------- 249
S +VL S+L +L++GK+VH V K+ S+ + ++ +Y KCG++K
Sbjct: 260 EHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHL 319
Query: 250 ------------------------EAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHL 285
EA LF + K++V W AM GY + L L
Sbjct: 320 LYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLEL 379
Query: 286 FDE-MRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLL 344
+ ++ PD + V+VL AC+ ++ G + +R GI + VD+
Sbjct: 380 ARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRT-GILMDKKLVTAFVDMY 438
Query: 345 GRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIH 379
+ G + A + S F+ ++ ++ C H
Sbjct: 439 SKCGNVEYAERIFDS-SFERDTVMYNAMIAGCAHH 472
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 252 bits (643), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 136/399 (34%), Positives = 212/399 (53%), Gaps = 13/399 (3%)
Query: 54 VGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMP----EKNCVSWSAMVSG 109
+ +AR F+ D W MI GY G + EA LF M + NCV+ ++++SG
Sbjct: 293 ISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSG 352
Query: 110 YVACGDLDAAVECFYAAPVRSVITW-----TAMITGYMKFGRVESAERLFREMSLKTLVT 164
+L+ + ++ V W A++ Y K + A+ +F S K +V
Sbjct: 353 CGLIENLELG-RSVHGLSIK-VGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVA 410
Query: 165 WNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVC 224
WN++I+G+ +NG + L LF M PN +++ S+ C++L +L +G +H
Sbjct: 411 WNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSV 470
Query: 225 KSPL--SSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKA 282
K SS GT+L+ YAKCGD + A +F I K+ ++W+AMI GY + G +
Sbjct: 471 KLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGS 530
Query: 283 LHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVD 342
L LF+EM KP+ TF ++L AC H G+V+ G +YF+ M +D+ +HY CMVD
Sbjct: 531 LELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVD 590
Query: 343 LLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATG 402
+L RAG L +A+D+I+ MP +P FG L C +H DL E K +L+L P A+
Sbjct: 591 MLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASY 650
Query: 403 YVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIE 441
YV ++N+YA+ RW +R MK+ + K G+S +E
Sbjct: 651 YVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 172/338 (50%), Gaps = 17/338 (5%)
Query: 32 KIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASML 91
K+P + V +L + + SA F+ + +++ W +MI+GY + L E +L
Sbjct: 170 KVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVL 229
Query: 92 FAVMPEKNCV----SWSAMVSGYVACGDLDAAVEC--FYAAPVRSVITW-----TAMITG 140
F M E N + ++ ++ +AC L A + F+ V+S I T+++
Sbjct: 230 FNRMRENNVLGNEYTYGTLI---MACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDM 286
Query: 141 YMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSL 200
Y+K G + +A R+F E S LV W AMI GY NG + L LF+ M KPN +++
Sbjct: 287 YVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTI 346
Query: 201 TSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPR 260
SVL GC + L+LG+ VH L K + DT +L+ MYAKC ++A +F
Sbjct: 347 ASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESE 405
Query: 261 KDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQY 320
KDIV+WN++ISG++Q+G+ +AL LF M + + P+ +T ++ AC G + +G
Sbjct: 406 KDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSL 465
Query: 321 FNMMVRDFGIKTKPEHYA-CMVDLLGRAGRLPEAVDLI 357
V+ + + H ++D + G P++ LI
Sbjct: 466 HAYSVKLGFLASSSVHVGTALLDFYAKCGD-PQSARLI 502
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 152/311 (48%), Gaps = 29/311 (9%)
Query: 11 SILSAFAKKHGNF---EQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVK 67
SI + +G F + AR +F++IPEP+ + +ML C+ + +D +
Sbjct: 77 SIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLL--- 133
Query: 68 DTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVEC-FYAA 126
M G+ ++ ++ K C + +G + C
Sbjct: 134 -------MKHGFRYDDIVFSKAL-------KACTELQDLDNG--------KKIHCQLVKV 171
Query: 127 PVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFK 186
P + T ++ Y K G ++SA ++F +++L+ +V W +MIAGYV+N E+GL LF
Sbjct: 172 PSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFN 231
Query: 187 SMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCG 246
M E+ N + ++++ C+ LSAL GK H + KS + + TSL+ MY KCG
Sbjct: 232 RMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCG 291
Query: 247 DLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLL 306
D+ A +F + D+V W AMI GY +G+ +AL LF +M+ +KP+ +T +VL
Sbjct: 292 DISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLS 351
Query: 307 ACNHAGLVDLG 317
C ++LG
Sbjct: 352 GCGLIENLELG 362
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 133/284 (46%), Gaps = 34/284 (11%)
Query: 135 TAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAK 194
T +++ Y FG + A +F ++ W M+ Y N + + +KL+ +++ G +
Sbjct: 80 TKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFR 139
Query: 195 PNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWEL 254
+ + + L C+ L L GK++H + K P S D T L+ MYAKCG++K A ++
Sbjct: 140 YDDIVFSKALKACTELQDLDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKV 198
Query: 255 FVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACN----- 309
F I +++V W +MI+GY ++ E+ L LF+ MR + + + T+ +++AC
Sbjct: 199 FNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSAL 258
Query: 310 ------HAGLVDLGVQYFNMMVR---DFGIKTKP---------EH-------YACMVDLL 344
H LV G++ + +V D +K EH + M+
Sbjct: 259 HQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGY 318
Query: 345 GRAGRLPEAVDLIKSMP---FKPHPAIFGTLLGACRIHKNLDLA 385
G + EA+ L + M KP+ ++L C + +NL+L
Sbjct: 319 THNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELG 362
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 123/273 (45%), Gaps = 30/273 (10%)
Query: 4 KSTVTWNSILSAFAKKHGNFEQARQLFEKIPE----PNTVSY-NIMLAC-HLHHFGVGSA 57
K V WNSI+S F+ ++G+ +A LF ++ PN V+ ++ AC L VGS+
Sbjct: 406 KDIVAWNSIISGFS-QNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSS 464
Query: 58 -RAFFDRMEVKDTASWNT---MISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVAC 113
A+ ++ ++S + ++ YA+ G A ++F + EKN ++WSAM+ GY
Sbjct: 465 LHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQ 524
Query: 114 GDLDAAVECF------YAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVT--- 164
GD ++E F P S T+T++++ G V ++ F M T
Sbjct: 525 GDTIGSLELFEEMLKKQQKPNES--TFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPST 582
Query: 165 --WNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQL 222
+ M+ G E L + + M +P+ + L GC S LG+ V +
Sbjct: 583 KHYTCMVDMLARAGELEQALDIIEKM---PIQPDVRCFGAFLHGCGMHSRFDLGEIVIKK 639
Query: 223 VCKSPLSSDTTAGTSLIS-MYAKCGDLKEAWEL 254
+ L D + L+S +YA G +A E+
Sbjct: 640 MLD--LHPDDASYYVLVSNLYASDGRWNQAKEV 670
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 3/124 (2%)
Query: 203 VLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKD 262
+L C+N+ +L +Q H ++ + L D + T L+S+Y G K+A +F QIP D
Sbjct: 50 LLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 263 IVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFN 322
W M+ Y + + + L+D + G + D I F L AC +D G +
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHC 166
Query: 323 MMVR 326
+V+
Sbjct: 167 QLVK 170
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 249 bits (636), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 159/492 (32%), Positives = 232/492 (47%), Gaps = 65/492 (13%)
Query: 4 KSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDR 63
+S WNSI+ A+AK H F LF +I +T N AC AR F +
Sbjct: 69 RSVFLWNSIIRAYAKAH-QFTTVLSLFSQILRSDTRPDNFTYAC--------LARGFSES 119
Query: 64 MEVK----------------DTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMV 107
+ K D + ++ Y++ GL+ EAS LF +P+ + W+ M+
Sbjct: 120 FDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMI 179
Query: 108 SGYVACGDLDAAVECF---------------------YAAPVRSVITWT----------- 135
GY CG D + F P ++ W+
Sbjct: 180 LGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLD 239
Query: 136 -------AMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSM 188
A++ Y + + SA +F +S LV +++I GY G ++ L LF +
Sbjct: 240 SHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAEL 299
Query: 189 LESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDL 248
SG KP+ + + VL C+ LS GK+VH V + L D ++LI MY+KCG L
Sbjct: 300 RMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLL 359
Query: 249 KEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLAC 308
K A LF IP K+IVS+N++I G HG A F E+ G+ PD ITF A+L C
Sbjct: 360 KCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTC 419
Query: 309 NHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAI 368
H+GL++ G + F M +FGI+ + EHY MV L+G AG+L EA + + S+ I
Sbjct: 420 CHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGI 479
Query: 369 FGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGY-VQLANVYAAQNRWEHVARIRRSMK 427
G LL C +H+N LAE A+N+ + + Y V L+NVYA RW+ V R+R +
Sbjct: 480 LGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGIS 539
Query: 428 ENKVVKAPGYSW 439
E+ K PG SW
Sbjct: 540 ESYGGKLPGISW 551
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 154/328 (46%), Gaps = 11/328 (3%)
Query: 56 SARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNC----VSWSAMVSGYV 111
SAR FD + WN++I YA+ LF+ + + +++ + G+
Sbjct: 58 SARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFS 117
Query: 112 ACGDLDAAVECFYAAPVRS-----VITWTAMITGYMKFGRVESAERLFREMSLKTLVTWN 166
D + C + + S I +A++ Y K G + A +LF + L WN
Sbjct: 118 ESFD-TKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWN 176
Query: 167 AMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKS 226
MI GY G + G+ LF M G +PN ++ ++ G + S L + VH K
Sbjct: 177 VMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKI 236
Query: 227 PLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLF 286
L S + G +L++MY++C + A +F I D+V+ +++I+GY++ G ++ALHLF
Sbjct: 237 NLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLF 296
Query: 287 DEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGR 346
E+R G KPD + VL +C G + + ++R G++ + + ++D+ +
Sbjct: 297 AELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIR-LGLELDIKVCSALIDMYSK 355
Query: 347 AGRLPEAVDLIKSMPFKPHPAIFGTLLG 374
G L A+ L +P K + +LG
Sbjct: 356 CGLLKCAMSLFAGIPEKNIVSFNSLILG 383
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 217 KQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQH 276
+++H V KS L+ D T L YA DL A +LF P + + WN++I YA+
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKA 84
Query: 277 GAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVD----LGVQYFNMMVRDFGIKT 332
L LF ++ +PD T+ AC G + G++ + + G+
Sbjct: 85 HQFTTVLSLFSQILRSDTRPDNFTY-----ACLARGFSESFDTKGLRCIHGIAIVSGLGF 139
Query: 333 KPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLL---GAC 376
+ +V +AG + EA L S+P P A++ ++ G C
Sbjct: 140 DQICGSAIVKAYSKAGLIVEASKLFCSIP-DPDLALWNVMILGYGCC 185
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 249 bits (635), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 152/484 (31%), Positives = 248/484 (51%), Gaps = 57/484 (11%)
Query: 8 TWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFG----VGSARAF--- 60
+W SI+++ A+ G+ E++ +F ++ ++++C ++ G V +AF
Sbjct: 298 SWTSIIASLARS-GDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGF 356
Query: 61 -FDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEK-NCVSWSAMVSGYVACGDLDA 118
D+ N+++S Y + L+ A LF + E+ N +W+ M+ GY G +
Sbjct: 357 VIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGY---GKMKC 413
Query: 119 AVECFY-------------AAPVRSVIT-----------------------------WTA 136
V+C +A SVI+ +
Sbjct: 414 HVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNS 473
Query: 137 MITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPN 196
+I Y K G + A R+F E ++TWNAMIA YV ++E + LF M+ KP+
Sbjct: 474 LIDLYGKMGDLTVAWRMFCEAD-TNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPS 532
Query: 197 ALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFV 256
+++L ++L+ C N +L+ G+ +H+ + ++ + + +LI MYAKCG L+++ ELF
Sbjct: 533 SITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFD 592
Query: 257 QIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDL 316
+KD V WN MISGY HG E A+ LFD+M +KP TF+A+L AC HAGLV+
Sbjct: 593 AGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQ 652
Query: 317 GVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGAC 376
G + F + + + +K +HY+C+VDLL R+G L EA + SMPF P I+GTLL +C
Sbjct: 653 GKKLF-LKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSC 711
Query: 377 RIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPG 436
H ++ A+ + DP + Y+ LAN+Y+A +WE R R M+E+ V K G
Sbjct: 712 MTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAG 771
Query: 437 YSWI 440
+S +
Sbjct: 772 HSVV 775
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 176/404 (43%), Gaps = 68/404 (16%)
Query: 9 WNSILSAFAKKHGNFEQARQLFEKI------PEPNTVSYNIMLACHLHHFGVGS------ 56
WNSI+ A +G++ ++ F + P+ T + L F VG+
Sbjct: 93 WNSIIKAHFS-NGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLV 151
Query: 57 -ARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYV---- 111
FDR +TA + + Y++ G + +A ++F MP+++ V+W+A++SG+V
Sbjct: 152 LKHGGFDR----NTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGE 207
Query: 112 -------------------------------ACGDLDAAVE--CFYAAPVR-----SVIT 133
AC +L A E C + V+ S
Sbjct: 208 SEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFV 267
Query: 134 WTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGA 193
++M + Y K G A FRE+ + + +W ++IA +G E+ +F M G
Sbjct: 268 QSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGM 327
Query: 194 KPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWE 253
P+ + ++ ++ + + GK H V + S D+T SL+SMY K L A +
Sbjct: 328 HPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEK 387
Query: 254 LFVQIPRK-DIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAG 312
LF +I + + +WN M+ GY + K + LF ++++ G++ D + +V+ +C+H G
Sbjct: 388 LFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIG 447
Query: 313 LVDLGVQYFNMMVR---DFGIKTKPEHYACMVDLLGRAGRLPEA 353
V LG +V+ D I ++DL G+ G L A
Sbjct: 448 AVLLGKSLHCYVVKTSLDLTISVVNS----LIDLYGKMGDLTVA 487
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 111/229 (48%), Gaps = 5/229 (2%)
Query: 129 RSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSM 188
++ + +I+ Y +G+ + R+F ++ + + WN++I + NG L F SM
Sbjct: 57 ENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSM 116
Query: 189 LESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCK-SPLSSDTTAGTSLISMYAKCGD 247
L SG P+ + V+ C+ L +G VH LV K +T G S + Y+KCG
Sbjct: 117 LLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGF 176
Query: 248 LKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGM---KPDWITFVAV 304
L++A +F ++P +D+V+W A+ISG+ Q+G E L +M G KP+ T
Sbjct: 177 LQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECG 236
Query: 305 LLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEA 353
AC++ G + G V++ G+ + + M ++G EA
Sbjct: 237 FQACSNLGALKEGRCLHGFAVKN-GLASSKFVQSSMFSFYSKSGNPSEA 284
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 69/160 (43%), Gaps = 1/160 (0%)
Query: 202 SVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK 261
SV+L C +L+ ++ + L+ LS + + LIS YA G + +F + R+
Sbjct: 30 SVIL-CDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRR 88
Query: 262 DIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYF 321
DI WN++I + +G ++L F M G PD T V+ AC +G
Sbjct: 89 DIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVH 148
Query: 322 NMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMP 361
++++ G A V + G L +A + MP
Sbjct: 149 GLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMP 188
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 248 bits (634), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 148/417 (35%), Positives = 219/417 (52%), Gaps = 21/417 (5%)
Query: 46 ACHLHHF----GVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNC- 100
C LH + V F+ + + +W ++ISG+ +A F M
Sbjct: 146 TCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVK 205
Query: 101 VSWSAMVSGYVACGDLDAAV--------------ECFYAAPVR-SVITWTAMITGYMKFG 145
+ + MV VACG V + ++ + V +VI T++I Y K G
Sbjct: 206 ANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCG 265
Query: 146 RVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLL 205
+ +A LF M +TLV+WN++I GY +NG AE+ L +F ML+ G P+ ++ SV+
Sbjct: 266 DLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIR 325
Query: 206 GCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVS 265
QLG+ +H V K+ D +L++MYAK GD + A + F + +KD ++
Sbjct: 326 ASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIA 385
Query: 266 WNAMISGYAQHGAGEKALHLFDEMRHDG-MKPDWITFVAVLLACNHAGLVDLGVQYFNMM 324
W +I G A HG G +AL +F M+ G PD IT++ VL AC+H GLV+ G +YF M
Sbjct: 386 WTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEM 445
Query: 325 VRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDL 384
G++ EHY CMVD+L RAGR EA L+K+MP KP+ I+G LL C IH+NL+L
Sbjct: 446 RDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLEL 505
Query: 385 AEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIE 441
+ + E + + YV L+N+YA RW V IR SMK +V K G+S +E
Sbjct: 506 TDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVE 562
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/423 (26%), Positives = 189/423 (44%), Gaps = 29/423 (6%)
Query: 57 ARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYV--ACG 114
AR+ F+ ++ WN+MI GY+ +A + + M K S YV AC
Sbjct: 60 ARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKG-YSPDYFTFPYVLKACS 118
Query: 115 DLDAAV--ECFYAAPVRS-----VITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNA 167
L C + V++ + T ++ YM G V R+F ++ +V W +
Sbjct: 119 GLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGS 178
Query: 168 MIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLV---- 223
+I+G+V N R D ++ F+ M +G K N + +L+ C + GK H +
Sbjct: 179 LISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLG 238
Query: 224 ----CKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAG 279
+S + + TSLI MYAKCGDL+ A LF +P + +VSWN++I+GY+Q+G
Sbjct: 239 FDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDA 298
Query: 280 EKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYAC 339
E+AL +F +M G+ PD +TF++V+ A G LG Q + V G
Sbjct: 299 EEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLG-QSIHAYVSKTGFVKDAAIVCA 357
Query: 340 MVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLG-ACRIHKNLDLAEFAAKNLLELDPS 398
+V++ + G A + + K A ++G A H N L+ F + + E +
Sbjct: 358 LVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIF--QRMQEKGNA 415
Query: 399 SATGYVQLANVYA------AQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSS 452
+ G L +YA + + A +R V+ G ++I S F +
Sbjct: 416 TPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYG-CMVDILSRAGRFEEA 474
Query: 453 DRL 455
+RL
Sbjct: 475 ERL 477
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 130/278 (46%), Gaps = 26/278 (9%)
Query: 39 VSYNIMLACHLHHF-----GVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLF- 92
V +N++LA L + +AR FD M + SWN++I+GY+Q G EA +F
Sbjct: 247 VGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFL 306
Query: 93 -----AVMPEKNC---VSWSAMVSGYVACGDLDAAVECFYAAP--VRSVITWTAMITGYM 142
+ P+K V ++M+ G C L ++ + + V+ A++ Y
Sbjct: 307 DMLDLGIAPDKVTFLSVIRASMIQG---CSQLGQSIHAYVSKTGFVKDAAIVCALVNMYA 363
Query: 143 KFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESG-AKPNALSLT 201
K G ESA++ F ++ K + W +I G +G + L +F+ M E G A P+ ++
Sbjct: 364 KTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYL 423
Query: 202 SVLLGCSNLSALQLGKQVH-QLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPR 260
VL CS++ ++ G++ ++ L ++ + ++ G +EA L +P
Sbjct: 424 GVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPV 483
Query: 261 KDIVS-WNAMISGYAQHGAGEKALHLFDEMRHDGMKPD 297
K V+ W A+++G H + L L D +R +P+
Sbjct: 484 KPNVNIWGALLNGCDIH----ENLELTDRIRSMVAEPE 517
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 69/151 (45%), Gaps = 15/151 (9%)
Query: 188 MLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCG- 246
M++ KP + S L C +L L Q+H L+ KS + + + LI C
Sbjct: 1 MMKKHYKP----ILSQLENCRSLVELN---QLHGLMIKSSVIRNVIPLSRLIDFCTTCPE 53
Query: 247 --DLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAV 304
+L A +F I + WN+MI GY+ +KAL + EM G PD+ TF V
Sbjct: 54 TMNLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYV 113
Query: 305 LLACNHAGLVDLGVQYFNMMVRDFGIKTKPE 335
L AC +GL D+ F V F +KT E
Sbjct: 114 LKAC--SGLRDI---QFGSCVHGFVVKTGFE 139
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 123/267 (46%), Gaps = 29/267 (10%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIPE----PNTVSY-NIMLACHLH---HF 52
M ++ V+WNSI++ ++ ++G+ E+A +F + + P+ V++ +++ A +
Sbjct: 277 MPERTLVSWNSIITGYS-QNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQL 335
Query: 53 GVGSARAFFDRME-VKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYV 111
G S A+ + VKD A +++ YA+ G A F + +K+ ++W+ ++ G
Sbjct: 336 G-QSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLA 394
Query: 112 ACGDLDAAVECFY-------AAPVRSVITWTAMITGYMKFGRVESAERLFREMS-----L 159
+ G + A+ F A P IT+ ++ G VE +R F EM
Sbjct: 395 SHGHGNEALSIFQRMQEKGNATP--DGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLE 452
Query: 160 KTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQV 219
T+ + M+ GR E+ +L K+M KPN ++L GC L+L ++
Sbjct: 453 PTVEHYGCMVDILSRAGRFEEAERLVKTM---PVKPNVNIWGALLNGCDIHENLELTDRI 509
Query: 220 HQLVCKSPLSSDTTAGTSLISMYAKCG 246
+V + P + L ++YAK G
Sbjct: 510 RSMVAE-PEELGSGIYVLLSNIYAKAG 535
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 248 bits (632), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 154/506 (30%), Positives = 262/506 (51%), Gaps = 49/506 (9%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKI------PEPNTVSYNI----------- 43
M+ + V+WN+++S +A GN + +L ++ P+ T ++
Sbjct: 205 MEQRDMVSWNTMISGYASV-GNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEM 263
Query: 44 --MLACHLHHFG-----------------VGSARAFFDRMEV---KDTASWNTMISGYAQ 81
ML C + G G A + +E KD W MISG +
Sbjct: 264 GRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMR 323
Query: 82 VGLMGEASMLFAVMPEKNC-VSWSAMVSGYVACG-----DLDAAVECFYAAPVRSVIT-- 133
+G +A ++F+ M + +S A+ S +C DL A+V + ++ T
Sbjct: 324 LGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPA 383
Query: 134 WTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSM-LESG 192
++IT Y K G ++ + +F M+ + LV+WNA+I+GY +N L LF+ M ++
Sbjct: 384 LNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTV 443
Query: 193 AKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAW 252
+ ++ ++ S+L CS+ AL +GK +H +V +S + + T+L+ MY+KCG L+ A
Sbjct: 444 QQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQ 503
Query: 253 ELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAG 312
F I KD+VSW +I+GY HG G+ AL ++ E H GM+P+ + F+AVL +C+H G
Sbjct: 504 RCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNG 563
Query: 313 LVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTL 372
+V G++ F+ MVRDFG++ EH AC+VDLL RA R+ +A K +P + G +
Sbjct: 564 MVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGII 623
Query: 373 LGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVV 432
L ACR + ++ + ++++EL P A YV+L + +AA RW+ V+ M+ +
Sbjct: 624 LDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLK 683
Query: 433 KAPGYSWIEISSEVHEFRSSDRLHPE 458
K PG+S IE++ + F + H +
Sbjct: 684 KLPGWSKIEMNGKTTTFFMNHTSHSD 709
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 125/350 (35%), Positives = 188/350 (53%), Gaps = 13/350 (3%)
Query: 45 LACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVM------PEK 98
L C H VG A+ FD+ME +D SWNTMISGYA VG M E L M P++
Sbjct: 188 LYCKCDH--VGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQ 245
Query: 99 NCVSWSAMVSGYVACGDLDAAVECFYAAPVRSVITW--TAMITGYMKFGRVESAERLFRE 156
S VSG + ++ + C V TA+IT Y+K G+ E++ R+
Sbjct: 246 QTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLET 305
Query: 157 MSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLG 216
+ K +V W MI+G + GRAE L +F ML+SG+ ++ ++ SV+ C+ L + LG
Sbjct: 306 IPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLG 365
Query: 217 KQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQH 276
VH V + + DT A SLI+MYAKCG L ++ +F ++ +D+VSWNA+ISGYAQ+
Sbjct: 366 ASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQN 425
Query: 277 GAGEKALHLFDEMRHDGMKP-DWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPE 335
KAL LF+EM+ ++ D T V++L AC+ AG + +G +++R F I+
Sbjct: 426 VDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSF-IRPCSL 484
Query: 336 HYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLA 385
+VD+ + G L A S+ +K + +G L+ H D+A
Sbjct: 485 VDTALVDMYSKCGYLEAAQRCFDSISWKDVVS-WGILIAGYGFHGKGDIA 533
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 144/313 (46%), Gaps = 14/313 (4%)
Query: 57 ARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNC----VSWSAMVSGYVA 112
AR F+ M +D W MI Y++ G++GEA L M + V+ M+SG +
Sbjct: 100 ARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLE 159
Query: 113 CGDLDAAVECFYAAPVR-----SVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNA 167
L +C + V + +M+ Y K V A+ LF +M + +V+WN
Sbjct: 160 ITQL----QCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNT 215
Query: 168 MIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSP 227
MI+GY G + LKL M G +P+ + + L + L++G+ +H + K+
Sbjct: 216 MISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTG 275
Query: 228 LSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFD 287
D T+LI+MY KCG + ++ + IP KD+V W MISG + G EKAL +F
Sbjct: 276 FDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFS 335
Query: 288 EMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRA 347
EM G +V+ +C G DLG ++R G ++ + +
Sbjct: 336 EMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRH-GYTLDTPALNSLITMYAKC 394
Query: 348 GRLPEAVDLIKSM 360
G L +++ + + M
Sbjct: 395 GHLDKSLVIFERM 407
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 111/229 (48%), Gaps = 4/229 (1%)
Query: 135 TAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAK 194
++++ Y KFG + A ++F EM + +V W AMI Y G + L M G K
Sbjct: 85 SSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIK 144
Query: 195 PNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWEL 254
P ++L +L G ++ LQ +H D S++++Y KC + +A +L
Sbjct: 145 PGPVTLLEMLSGVLEITQLQC---LHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDL 201
Query: 255 FVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLV 314
F Q+ ++D+VSWN MISGYA G + L L MR DG++PD TF A L +
Sbjct: 202 FDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDL 261
Query: 315 DLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFK 363
++G +V+ G ++ + + G+ + +++++P K
Sbjct: 262 EMGRMLHCQIVKT-GFDVDMHLKTALITMYLKCGKEEASYRVLETIPNK 309
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 100/197 (50%), Gaps = 6/197 (3%)
Query: 165 WNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVC 224
+N+ I +G + L F SML + P+ + S+L C++L L G +HQ V
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 225 KSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALH 284
+ SSD +SL+++YAK G L A ++F ++ +D+V W AMI Y++ G +A
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133
Query: 285 LFDEMRHDGMKPDWITFVAVLLACNHAGLVDLG-VQYFNMMVRDFGIKTKPEHYACMVDL 343
L +EMR G+KP +T + +L +G++++ +Q + +G M++L
Sbjct: 134 LVNEMRFQGIKPGPVTLLEML-----SGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNL 188
Query: 344 LGRAGRLPEAVDLIKSM 360
+ + +A DL M
Sbjct: 189 YCKCDHVGDAKDLFDQM 205
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 142/440 (32%), Positives = 220/440 (50%), Gaps = 34/440 (7%)
Query: 26 ARQLFEKIPEPNTVSYN-IMLACHLHHFGVGSARAFFDRME------------------- 65
A +F I P+T +N I+ C LH S++ FF M
Sbjct: 67 ATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACA 126
Query: 66 VKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYA 125
K + + + Q G S LF + + ++ Y +D+A++ F
Sbjct: 127 AKKNGDLTLVKTLHCQALRFGLLSDLFTL---------NTLIRVYSLIAPIDSALQLFDE 177
Query: 126 APVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLF 185
P R V+T+ +I G +K + A LF M L+ LV+WN++I+GY + + +KLF
Sbjct: 178 NPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLF 237
Query: 186 KSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKC 245
M+ G KP+ +++ S L C+ Q GK +H + L D+ T L+ YAKC
Sbjct: 238 DEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKC 297
Query: 246 GDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVL 305
G + A E+F K + +WNAMI+G A HG GE + F +M G+KPD +TF++VL
Sbjct: 298 GFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVL 357
Query: 306 LACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMP---- 361
+ C+H+GLVD F+ M + + + +HY CM DLLGRAG + EA ++I+ MP
Sbjct: 358 VGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGG 417
Query: 362 FKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVAR 421
+ + LLG CRIH N+++AE AA + L P Y + +YA RWE V +
Sbjct: 418 NREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVK 477
Query: 422 IRRSM-KENKVVKAPGYSWI 440
+R + ++ KV K G+S +
Sbjct: 478 VREIIDRDKKVKKNVGFSKV 497
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 137/273 (50%), Gaps = 14/273 (5%)
Query: 24 EQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVG 83
+ A QLF++ P+ + V+YN+++ + + AR FD M ++D SWN++ISGYAQ+
Sbjct: 169 DSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMN 228
Query: 84 LMGEASMLFAVMP----EKNCVSWSAMVSGYVACGDLDAAVECF-YAAPVRSVIT---WT 135
EA LF M + + V+ + +S GD Y R I T
Sbjct: 229 HCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLAT 288
Query: 136 AMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKP 195
++ Y K G +++A +F S KTL TWNAMI G +G E + F+ M+ SG KP
Sbjct: 289 GLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKP 348
Query: 196 NALSLTSVLLGCSNLSALQLGKQV-HQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWEL 254
+ ++ SVL+GCS+ + + + Q+ ++ + + + + G ++EA E+
Sbjct: 349 DGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEM 408
Query: 255 FVQIP-----RKDIVSWNAMISGYAQHGAGEKA 282
Q+P R+ +++W+ ++ G HG E A
Sbjct: 409 IEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIA 441
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 124/278 (44%), Gaps = 28/278 (10%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIP----EPNTVSYNIMLACHLHHFGVGS 56
M ++ V+WNS++S +A+ + + +A +LF+++ +P+ V+ L+
Sbjct: 209 MPLRDLVSWNSLISGYAQMN-HCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQK 267
Query: 57 ARAFFDRMEVK----DTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVA 112
+A D + K D+ ++ YA+ G + A +F + +K +W+AM++G
Sbjct: 268 GKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAM 327
Query: 113 CGDLDAAVECFYAAPVRSV----ITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAM 168
G+ + V+ F + +T+ +++ G G V+ A LF +M ++L N
Sbjct: 328 HGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQM--RSLYDVNRE 385
Query: 169 IAGY-------VENGRAEDGLKLFKSMLESGA-KPNALSLTSVLLGCSNLSALQLGKQVH 220
+ Y G E+ ++ + M + G + L+ + +L GC +++ ++
Sbjct: 386 MKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAA 445
Query: 221 QLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQI 258
V K+ D ++ MYA E WE V++
Sbjct: 446 NRV-KALSPEDGGVYKVMVEMYANA----ERWEEVVKV 478
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 153/455 (33%), Positives = 247/455 (54%), Gaps = 21/455 (4%)
Query: 10 NSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVK-- 67
N+++S + K+ G + AR+LF+++ E + VS+N ++ C+ +G A DRM +
Sbjct: 223 NALISMY-KRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGV 281
Query: 68 --DTASWNTMISGYAQVGLMGEASMLFAVMPEKNC---VSWSAMVSGYVACGDLDAAV-- 120
+WNT+ G + G L V+ +NC + AM++G AC + A
Sbjct: 282 EASIVTWNTIAGGCLEAG--NYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWG 339
Query: 121 ECFYAAPVRSVI-------TWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYV 173
+ F+ +RS ++IT Y + + A +F+++ +L TWN++I+G+
Sbjct: 340 KVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFA 399
Query: 174 ENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDT- 232
N R+E+ L K ML SG PN ++L S+L + + LQ GK+ H + + D
Sbjct: 400 YNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCL 459
Query: 233 TAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHD 292
SL+ MYAK G++ A +F + ++D V++ ++I GY + G GE AL F +M
Sbjct: 460 ILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRS 519
Query: 293 GMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPE 352
G+KPD +T VAVL AC+H+ LV G F M FGI+ + EHY+CMVDL RAG L +
Sbjct: 520 GIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDK 579
Query: 353 AVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAA-KNLLELDPSSATGYVQLANVYA 411
A D+ ++P++P A+ TLL AC IH N ++ E+AA K LLE P Y+ LA++YA
Sbjct: 580 ARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYA 639
Query: 412 AQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEV 446
W + ++ + + V KA ++ +E SE+
Sbjct: 640 VTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSEL 674
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 85/176 (48%)
Query: 137 MITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPN 196
++T Y F ++ A+ + + + WN +I Y+ N R ++ + ++K M+ G + +
Sbjct: 124 LVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRAD 183
Query: 197 ALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFV 256
+ SV+ C+ L G+ VH + S + +LISMY + G + A LF
Sbjct: 184 EFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFD 243
Query: 257 QIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAG 312
++ +D VSWNA+I+ Y +A L D M G++ +T+ + C AG
Sbjct: 244 RMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 153/455 (33%), Positives = 247/455 (54%), Gaps = 21/455 (4%)
Query: 10 NSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVK-- 67
N+++S + K+ G + AR+LF+++ E + VS+N ++ C+ +G A DRM +
Sbjct: 223 NALISMY-KRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGV 281
Query: 68 --DTASWNTMISGYAQVGLMGEASMLFAVMPEKNC---VSWSAMVSGYVACGDLDAAV-- 120
+WNT+ G + G L V+ +NC + AM++G AC + A
Sbjct: 282 EASIVTWNTIAGGCLEAG--NYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWG 339
Query: 121 ECFYAAPVRSVI-------TWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYV 173
+ F+ +RS ++IT Y + + A +F+++ +L TWN++I+G+
Sbjct: 340 KVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFA 399
Query: 174 ENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDT- 232
N R+E+ L K ML SG PN ++L S+L + + LQ GK+ H + + D
Sbjct: 400 YNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCL 459
Query: 233 TAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHD 292
SL+ MYAK G++ A +F + ++D V++ ++I GY + G GE AL F +M
Sbjct: 460 ILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRS 519
Query: 293 GMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPE 352
G+KPD +T VAVL AC+H+ LV G F M FGI+ + EHY+CMVDL RAG L +
Sbjct: 520 GIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDK 579
Query: 353 AVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAA-KNLLELDPSSATGYVQLANVYA 411
A D+ ++P++P A+ TLL AC IH N ++ E+AA K LLE P Y+ LA++YA
Sbjct: 580 ARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYA 639
Query: 412 AQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEV 446
W + ++ + + V KA ++ +E SE+
Sbjct: 640 VTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSEL 674
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 85/176 (48%)
Query: 137 MITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPN 196
++T Y F ++ A+ + + + WN +I Y+ N R ++ + ++K M+ G + +
Sbjct: 124 LVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRAD 183
Query: 197 ALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFV 256
+ SV+ C+ L G+ VH + S + +LISMY + G + A LF
Sbjct: 184 EFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFD 243
Query: 257 QIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAG 312
++ +D VSWNA+I+ Y +A L D M G++ +T+ + C AG
Sbjct: 244 RMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 153/494 (30%), Positives = 259/494 (52%), Gaps = 52/494 (10%)
Query: 4 KSTVTWNSILSAFAKKHGNFEQARQLFEKIP---EPNTVS-YNIMLACHLHHFGV----G 55
K+ V+W +++S++ + + + R E I EPN V+ Y+++ +C L G+
Sbjct: 266 KNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGL--IGLIREGK 323
Query: 56 SARAFFDRMEVKDTASWNTM--ISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVAC 113
S F R E+ ++ + YA+ G + + + V+ ++N V+W++++S Y
Sbjct: 324 SVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHR 383
Query: 114 GDLDAAVECF----------------------------------YAAPVRSVIT----WT 135
G + A+ F + +R+ ++
Sbjct: 384 GMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQN 443
Query: 136 AMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKP 195
++I Y K G V+SA +F ++ +++VTWN+M+ G+ +NG + + + LF M S +
Sbjct: 444 SLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEM 503
Query: 196 NALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELF 255
N ++ +V+ CS++ +L+ GK VH + S L D T+LI MYAKCGDL A +F
Sbjct: 504 NEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVF 562
Query: 256 VQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVD 315
+ + IVSW++MI+ Y HG A+ F++M G KP+ + F+ VL AC H+G V+
Sbjct: 563 RAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVE 622
Query: 316 LGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGA 375
G YFN+M + FG+ EH+AC +DLL R+G L EA IK MPF +++G+L+
Sbjct: 623 EGKYYFNLM-KSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNG 681
Query: 376 CRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAP 435
CRIH+ +D+ + +L ++ Y L+N+YA + WE R+R +MK + + K P
Sbjct: 682 CRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVP 741
Query: 436 GYSWIEISSEVHEF 449
GYS IEI +V F
Sbjct: 742 GYSAIEIDQKVFRF 755
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 174/343 (50%), Gaps = 32/343 (9%)
Query: 21 GNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYA 80
G+ + +R +FE P P++ Y +++ C++ + +A + R+ +S
Sbjct: 48 GSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRL-----------VSETT 96
Query: 81 QVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACG--DLDAAVECFYAAPVRSVITWTAMI 138
Q+ S+L A + +S V G + G D DA +E T+++
Sbjct: 97 QISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIE-------------TSLL 143
Query: 139 TGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNAL 198
Y + G + AE++F M ++ LV W+ +++ +ENG L++FK M++ G +P+A+
Sbjct: 144 CMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAV 203
Query: 199 SLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQI 258
++ SV+ GC+ L L++ + VH + + D T SL++MY+KCGDL + +F +I
Sbjct: 204 TMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKI 263
Query: 259 PRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGV 318
+K+ VSW AMIS Y + EKAL F EM G++P+ +T +VL +C GL+ G
Sbjct: 264 AKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGK 323
Query: 319 QYFNMMVRDFGIKTKPEHYA---CMVDLLGRAGRLPEAVDLIK 358
VR + P + + +V+L G+L + +++
Sbjct: 324 SVHGFAVRR---ELDPNYESLSLALVELYAECGKLSDCETVLR 363
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 177/352 (50%), Gaps = 28/352 (7%)
Query: 10 NSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLH-HFGVGSARAFFDRMEVKD 68
NS+L+ ++K G+ + ++FEKI + N VS+ M++ + F + R+F + ++
Sbjct: 241 NSLLTMYSK-CGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGI 299
Query: 69 TASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPV 128
+ T+ S + GL+G + V G+ +LD E
Sbjct: 300 EPNLVTLYSVLSSCGLIG-------------LIREGKSVHGFAVRRELDPNYESLS---- 342
Query: 129 RSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSM 188
A++ Y + G++ E + R +S + +V WN++I+ Y G L LF+ M
Sbjct: 343 ------LALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQM 396
Query: 189 LESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDL 248
+ KP+A +L S + C N + LGKQ+H V ++ + SD SLI MY+K G +
Sbjct: 397 VTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDV-SDEFVQNSLIDMYSKSGSV 455
Query: 249 KEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLAC 308
A +F QI + +V+WN+M+ G++Q+G +A+ LFD M H ++ + +TF+AV+ AC
Sbjct: 456 DSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQAC 515
Query: 309 NHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSM 360
+ G ++ G + ++ G+K A ++D+ + G L A + ++M
Sbjct: 516 SSIGSLEKGKWVHHKLIIS-GLKDLFTDTA-LIDMYAKCGDLNAAETVFRAM 565
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 148/283 (52%), Gaps = 11/283 (3%)
Query: 54 VGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMP----EKNCVSWSAMVSG 109
+ A FD M V+D +W+T++S + G + +A +F M E + V+ ++V G
Sbjct: 152 LSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEG 211
Query: 110 YVACGDLDAAVECFYAAPVRSVITW-----TAMITGYMKFGRVESAERLFREMSLKTLVT 164
G L A + R + +++T Y K G + S+ER+F +++ K V+
Sbjct: 212 CAELGCLRIA-RSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVS 270
Query: 165 WNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVC 224
W AMI+ Y +E L+ F M++SG +PN ++L SVL C + ++ GK VH
Sbjct: 271 WTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAV 330
Query: 225 KSPLSSD-TTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKAL 283
+ L + + +L+ +YA+CG L + + + ++IV+WN++IS YA G +AL
Sbjct: 331 RRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQAL 390
Query: 284 HLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVR 326
LF +M +KPD T + + AC +AGLV LG Q ++R
Sbjct: 391 GLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIR 433
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 125/307 (40%), Positives = 186/307 (60%), Gaps = 2/307 (0%)
Query: 135 TAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAK 194
+ IT Y K G E+A ++F E + L +WNA+I G GRA + +++F M SG +
Sbjct: 156 SGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLE 215
Query: 195 PNALSLTSVLLGCSNLSALQLGKQVHQLV--CKSPLSSDTTAGTSLISMYAKCGDLKEAW 252
P+ ++ SV C L L L Q+H+ V K+ SD SLI MY KCG + A
Sbjct: 216 PDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLAS 275
Query: 253 ELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAG 312
+F ++ ++++VSW++MI GYA +G +AL F +MR G++P+ ITFV VL AC H G
Sbjct: 276 HIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGG 335
Query: 313 LVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTL 372
LV+ G YF MM +F ++ HY C+VDLL R G+L EA +++ MP KP+ ++G L
Sbjct: 336 LVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCL 395
Query: 373 LGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVV 432
+G C ++++AE+ A ++EL+P + YV LANVYA + W+ V R+R+ MK KV
Sbjct: 396 MGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVA 455
Query: 433 KAPGYSW 439
K P YS+
Sbjct: 456 KIPAYSY 462
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 116/252 (46%), Gaps = 14/252 (5%)
Query: 43 IMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVS 102
I L C F +AR FD + SWN +I G G EA +F M
Sbjct: 159 ITLYCKAGEFE--NARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEP 216
Query: 103 WS-AMVSGYVACG---DLDAAVE---CFYAAPVR---SVITWTAMITGYMKFGRVESAER 152
MVS +CG DL A + C A ++ ++I Y K GR++ A
Sbjct: 217 DDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASH 276
Query: 153 LFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSA 212
+F EM + +V+W++MI GY NG + L+ F+ M E G +PN ++ VL C +
Sbjct: 277 IFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGL 336
Query: 213 LQLGKQVHQLV-CKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK-DIVSWNAMI 270
++ GK ++ + L + ++ + ++ G LKEA ++ ++P K +++ W ++
Sbjct: 337 VEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLM 396
Query: 271 SGYAQHGAGEKA 282
G + G E A
Sbjct: 397 GGCEKFGDVEMA 408
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 99/200 (49%), Gaps = 7/200 (3%)
Query: 165 WNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVC 224
WN ++ Y+ + D ++++ M+ S P+ SL V+ + LGK++H +
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 225 KSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALH 284
+ D + I++Y K G+ + A ++F + P + + SWNA+I G G +A+
Sbjct: 145 RLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVE 204
Query: 285 LFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACM---- 340
+F +M+ G++PD T V+V +C G + L Q +++ KT+ + M
Sbjct: 205 MFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQ---AKTEEKSDIMMLNSL 261
Query: 341 VDLLGRAGRLPEAVDLIKSM 360
+D+ G+ GR+ A + + M
Sbjct: 262 IDMYGKCGRMDLASHIFEEM 281
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 243 bits (619), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 153/513 (29%), Positives = 242/513 (47%), Gaps = 84/513 (16%)
Query: 10 NSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARA-----FFDRM 64
N +L A+ K F+ A +LF+++P N V++NI++ + G + RA + R+
Sbjct: 75 NKLLQAYTKIR-EFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRI 133
Query: 65 EVKD---------------TASWN------------------------TMISGYAQVGLM 85
D T S N +++ Y + GL+
Sbjct: 134 LFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLI 193
Query: 86 GEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAV------------------------- 120
EA +F + +++ V W+A+VS YV G +D A
Sbjct: 194 VEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLS 253
Query: 121 EC------------FYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAM 168
C F + + TA++ Y K + A F M ++ +V+WNAM
Sbjct: 254 ACRIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAM 313
Query: 169 IAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPL 228
I G+ +NG + ++LF ML +P+ L+ SVL C+ SA+ KQV +V K
Sbjct: 314 IVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGS 373
Query: 229 SSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDE 288
+ + SLIS Y++ G+L EA F I D+VSW ++I A HG E++L +F+
Sbjct: 374 ADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFES 433
Query: 289 MRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAG 348
M ++PD ITF+ VL AC+H GLV G++ F M + I+ + EHY C++DLLGRAG
Sbjct: 434 MLQK-LQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAG 492
Query: 349 RLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLAN 408
+ EA D++ SMP +P G C IH+ + ++ AK LLE++P+ Y L+N
Sbjct: 493 FIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSN 552
Query: 409 VYAAQNRWEHVARIRRSMKENKV-VKAPGYSWI 440
Y ++ W A +R+ + N K PG SW+
Sbjct: 553 AYVSEGHWNQAALLRKRERRNCYNPKTPGCSWL 585
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 128/283 (45%), Gaps = 36/283 (12%)
Query: 130 SVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVE-----NGRAEDGLKL 184
S+ ++ Y K + A++LF EM L+ +VTWN +I G ++ N RA G
Sbjct: 70 SLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCY 129
Query: 185 FKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAK 244
+L + + +S ++ C++ + ++ G Q+H L+ K L S TSL+ Y K
Sbjct: 130 LSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGK 189
Query: 245 CGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDG--MKPDWITFV 302
CG + EA +F + +D+V WNA++S Y +G ++A L M D + D+ TF
Sbjct: 190 CGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFS 249
Query: 303 AVLLACN-------HAGLVDLGVQY--------FNMMVRDFGIKTKPEHYACMVD----- 342
++L AC HA L + Q+ NM + + E + MV
Sbjct: 250 SLLSACRIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVS 309
Query: 343 ----LLGRA--GRLPEAVDLIKSM---PFKPHPAIFGTLLGAC 376
++G A G EA+ L M +P F ++L +C
Sbjct: 310 WNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSC 352
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 96/257 (37%), Gaps = 45/257 (17%)
Query: 217 KQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQH 276
KQ H + K + + L+ Y K + +A +LF ++P ++IV+WN +I G Q
Sbjct: 56 KQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQR 115
Query: 277 -GAGEKALHL----FDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIK 331
G HL + + D ++F+ ++ C + + G+Q +MV+ G++
Sbjct: 116 DGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQ-GLE 174
Query: 332 TKPEHYACMVDLLGRA-------------------------------GRLPEAVDLIKSM 360
+ +V G+ G + EA L+K M
Sbjct: 175 SSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLM 234
Query: 361 -----PFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNR 415
F+ F +LL ACRI + + K + D AT L N+YA N
Sbjct: 235 GSDKNRFRGDYFTFSSLLSACRIEQGKQIHAILFKVSYQFDIPVATA---LLNMYAKSNH 291
Query: 416 WEHVARIRRSMKENKVV 432
SM VV
Sbjct: 292 LSDARECFESMVVRNVV 308
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 241 bits (616), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 133/395 (33%), Positives = 216/395 (54%), Gaps = 14/395 (3%)
Query: 57 ARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYV--ACG 114
AR FD M D W ++S +++ L EA LF M + G V ACG
Sbjct: 217 ARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACG 276
Query: 115 DL-------DAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNA 167
+L + + +V+ ++++ Y K G V A ++F MS K V+W+A
Sbjct: 277 NLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSA 336
Query: 168 MIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSP 227
++ GY +NG E +++F+ M E + +VL C+ L+A++LGK++H +
Sbjct: 337 LLGGYCQNGEHEKAIEIFREMEE----KDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRG 392
Query: 228 LSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFD 287
+ ++LI +Y K G + A ++ ++ +++++WNAM+S AQ+G GE+A+ F+
Sbjct: 393 CFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFN 452
Query: 288 EMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRA 347
+M G+KPD+I+F+A+L AC H G+VD G YF +M + +GIK EHY+CM+DLLGRA
Sbjct: 453 DMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRA 512
Query: 348 GRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLD-LAEFAAKNLLELDPSSATGYVQL 406
G EA +L++ + +++G LLG C + + +AE AK ++EL+P YV L
Sbjct: 513 GLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLL 572
Query: 407 ANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIE 441
+N+Y A R IR+ M V K G SWI+
Sbjct: 573 SNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWID 607
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 152/321 (47%), Gaps = 16/321 (4%)
Query: 53 GVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMP----EKNCVSWSAMVS 108
G+ R FD VKD SW +M+SGY +A +F M + N + S+ V
Sbjct: 112 GMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVK 171
Query: 109 GYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKF-----GRVESAERLFREMSLKTLV 163
G++ CF+ + W I+ + + A R+F EM ++
Sbjct: 172 ACSELGEVRLG-RCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVI 230
Query: 164 TWNAMIAGYVENGRAEDGLKLFKSMLES-GAKPNALSLTSVLLGCSNLSALQLGKQVHQL 222
W A+++ + +N E+ L LF +M G P+ + +VL C NL L+ GK++H
Sbjct: 231 CWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGK 290
Query: 223 VCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKA 282
+ + + S+ +SL+ MY KCG ++EA ++F + +K+ VSW+A++ GY Q+G EKA
Sbjct: 291 LITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKA 350
Query: 283 LHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVD 342
+ +F EM + D F VL AC V LG + VR G + ++D
Sbjct: 351 IEIFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRR-GCFGNVIVESALID 405
Query: 343 LLGRAGRLPEAVDLIKSMPFK 363
L G++G + A + M +
Sbjct: 406 LYGKSGCIDSASRVYSKMSIR 426
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 146/324 (45%), Gaps = 63/324 (19%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEK-------IPEPNTVSYNIMLACHLHHFG 53
M + W ++LSAF+ K+ +E+A LF +P+ +T ++ AC
Sbjct: 224 MPEPDVICWTAVLSAFS-KNDLYEEALGLFYAMHRGKGLVPDGSTFG-TVLTAC------ 275
Query: 54 VGSARAFFDRMEV----------KDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSW 103
G+ R E+ + ++++ Y + G + EA +F M +KN VSW
Sbjct: 276 -GNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSW 334
Query: 104 SAMVSGYVACGDLDAAVECFYA-------------------APVR--------------- 129
SA++ GY G+ + A+E F A VR
Sbjct: 335 SALLGGYCQNGEHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCF 394
Query: 130 -SVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSM 188
+VI +A+I Y K G ++SA R++ +MS++ ++TWNAM++ +NGR E+ + F M
Sbjct: 395 GNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDM 454
Query: 189 LESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKS-PLSSDTTAGTSLISMYAKCGD 247
++ G KP+ +S ++L C + + G+ L+ KS + T + +I + + G
Sbjct: 455 VKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGL 514
Query: 248 LKEAWELFVQIP-RKDIVSWNAMI 270
+EA L + R D W ++
Sbjct: 515 FEEAENLLERAECRNDASLWGVLL 538
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 120/245 (48%), Gaps = 3/245 (1%)
Query: 135 TAMITGYMKFG-RVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGA 193
++++ Y K G + R+F +K ++W +M++GYV L++F M+ G
Sbjct: 100 NSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGL 159
Query: 194 KPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWE 253
N +L+S + CS L ++LG+ H +V + ++L +Y + +A
Sbjct: 160 DANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARR 219
Query: 254 LFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEM-RHDGMKPDWITFVAVLLACNHAG 312
+F ++P D++ W A++S ++++ E+AL LF M R G+ PD TF VL AC +
Sbjct: 220 VFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLR 279
Query: 313 LVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTL 372
+ G + ++ + GI + + ++D+ G+ G + EA + M K + L
Sbjct: 280 RLKQGKEIHGKLITN-GIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALL 338
Query: 373 LGACR 377
G C+
Sbjct: 339 GGYCQ 343
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 1/151 (0%)
Query: 176 GRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAG 235
G+ + +++ S S S+L C+ + + G Q H V KS L +D G
Sbjct: 40 GQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVG 99
Query: 236 TSLISMYAKCG-DLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGM 294
SL+S+Y K G ++E +F KD +SW +M+SGY KAL +F EM G+
Sbjct: 100 NSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGL 159
Query: 295 KPDWITFVAVLLACNHAGLVDLGVQYFNMMV 325
+ T + + AC+ G V LG + +++
Sbjct: 160 DANEFTLSSAVKACSELGEVRLGRCFHGVVI 190
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 150/505 (29%), Positives = 254/505 (50%), Gaps = 83/505 (16%)
Query: 19 KHGNFEQARQLFEKIPEPNTVSYNIMLA----CHLH------------------HFGVGS 56
K G+ + AR+LF++I + + VS+ M++ C H F GS
Sbjct: 59 KQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGS 118
Query: 57 AR-------AFFDRMEV-----KDTASWN-----TMISGYAQVGLMGEASMLFAVMPEKN 99
+ M++ K + N ++S YA+ G M EA + F M E++
Sbjct: 119 VLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERD 178
Query: 100 CVSWSAMVSGYVA--CGDLDAAV-----------ECFYAAPV------------------ 128
VSW+AM+ GY A C D ++ +CF +
Sbjct: 179 LVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHG 238
Query: 129 --------RSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVE-NGRAE 179
RS +++ Y+K G + +A +L + L++ A+I G+ + N
Sbjct: 239 LAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTS 298
Query: 180 DGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSP-LSSDTTAGTSL 238
D +FK M+ K + + ++S+L C+ ++++ +G+Q+H KS + D G SL
Sbjct: 299 DAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSL 358
Query: 239 ISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDW 298
I MYAK G++++A F ++ KD+ SW ++I+GY +HG EKA+ L++ M H+ +KP+
Sbjct: 359 IDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPND 418
Query: 299 ITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIK 358
+TF+++L AC+H G +LG + ++ M+ GI+ + EH +C++D+L R+G L EA LI+
Sbjct: 419 VTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIR 478
Query: 359 SMP--FKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRW 416
S + +G L ACR H N+ L++ AA LL ++P Y+ LA+VYAA W
Sbjct: 479 SKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAW 538
Query: 417 EHVARIRRSMKEN-KVVKAPGYSWI 440
++ R+ MKE+ KAPGYS +
Sbjct: 539 DNALNTRKLMKESGSCNKAPGYSLV 563
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 157/332 (47%), Gaps = 11/332 (3%)
Query: 42 NIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCV 101
++++ +L V AR FDR+ +D SW MIS +++ G +A +LF M ++ V
Sbjct: 51 DMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHRED-V 109
Query: 102 SWSAMVSGYV--ACGDLDAAVECFY-------AAPVRSVITWTAMITGYMKFGRVESAER 152
+ G V +C DL E ++I +A+++ Y + G++E A
Sbjct: 110 KANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARL 169
Query: 153 LFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSA 212
F M + LV+WNAMI GY N A+ LF+ ML G KP+ + S+L +
Sbjct: 170 QFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKC 229
Query: 213 LQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISG 272
L++ ++H L K + SL++ Y KCG L AW+L ++D++S A+I+G
Sbjct: 230 LEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITG 289
Query: 273 YA-QHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIK 331
++ Q+ A +F +M K D + ++L C V +G Q ++ I+
Sbjct: 290 FSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIR 349
Query: 332 TKPEHYACMVDLLGRAGRLPEAVDLIKSMPFK 363
++D+ ++G + +AV + M K
Sbjct: 350 FDVALGNSLIDMYAKSGEIEDAVLAFEEMKEK 381
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 239 bits (609), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 151/445 (33%), Positives = 242/445 (54%), Gaps = 18/445 (4%)
Query: 10 NSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRM----- 64
S++S +++ G + A ++FEK+P + V+YN ++ + + + + F+ M
Sbjct: 168 TSLVSMYSR-CGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSS 226
Query: 65 -EVKDTASWNTMISGYAQVGLMGEASMLFAVMPEK---NCVSWSAMVSGYVACGDLDAAV 120
E D N + + + + L + VM ++ + +A++ Y C +A
Sbjct: 227 EEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAY 286
Query: 121 ECFYA-APVRSVITWTAMITGYMKFGRVESAERLFREMSLKTL----VTWNAMIAGYVEN 175
F R++I+W ++I+G M G+ E+A LF ++ + L TWN++I+G+ +
Sbjct: 287 IVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQL 346
Query: 176 GRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAG 235
G+ + K F+ ML P+ LTS+L CS++ L+ GK++H V K+ D
Sbjct: 347 GKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVL 406
Query: 236 TSLISMYAKCGDLKEAWELFVQI-PR-KDIVSWNAMISGYAQHGAGEKALHLFDEMRHDG 293
TSLI MY KCG A +F + P+ KD V WN MISGY +HG E A+ +F+ +R +
Sbjct: 407 TSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEK 466
Query: 294 MKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEA 353
++P TF AVL AC+H G V+ G Q F +M ++G K EH CM+DLLGR+GRL EA
Sbjct: 467 VEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREA 526
Query: 354 VDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQ 413
++I M +LLG+CR H + L E AA L EL+P + +V L+++YAA
Sbjct: 527 KEVIDQMSEPSSSVYS-SLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAAL 585
Query: 414 NRWEHVARIRRSMKENKVVKAPGYS 438
RWE V IR+ + + ++VK PG S
Sbjct: 586 ERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 167/323 (51%), Gaps = 21/323 (6%)
Query: 19 KHGNFEQARQLFEKIPEP----NTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNT 74
K G+ Q R L ++ + + + +++ ++ V A D M + AS N
Sbjct: 43 KLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNA 102
Query: 75 MISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVA-----CGDLDAAVECFYAAPVR 129
+SG + G +A +F VS S M S VA CGD++ ++ + ++
Sbjct: 103 AVSGLLENGFCRDAFRMFG----DARVSGSGMNSVTVASVLGGCGDIEGGMQ-LHCLAMK 157
Query: 130 S-----VITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKL 184
S V T++++ Y + G A R+F ++ K++VT+NA I+G +ENG +
Sbjct: 158 SGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSV 217
Query: 185 FKSMLE-SGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYA 243
F M + S +PN ++ + + C++L LQ G+Q+H LV K +T GT+LI MY+
Sbjct: 218 FNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYS 277
Query: 244 KCGDLKEAWELFVQIP-RKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFV 302
KC K A+ +F ++ ++++SWN++ISG +G E A+ LF+++ +G+KPD T+
Sbjct: 278 KCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWN 337
Query: 303 AVLLACNHAGLVDLGVQYFNMMV 325
+++ + G V ++F M+
Sbjct: 338 SLISGFSQLGKVIEAFKFFERML 360
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 113/204 (55%), Gaps = 5/204 (2%)
Query: 131 VITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLE 190
V T TA+++ YMK +V A ++ EM + + + NA ++G +ENG D ++F
Sbjct: 66 VFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARV 125
Query: 191 SGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKE 250
SG+ N++++ SVL GC ++ G Q+H L KS + GTSL+SMY++CG+
Sbjct: 126 SGSGMNSVTVASVLGGCGDIEG---GMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVL 182
Query: 251 AWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRH-DGMKPDWITFVAVLLACN 309
A +F ++P K +V++NA ISG ++G +F+ MR +P+ +TFV + AC
Sbjct: 183 AARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACA 242
Query: 310 HAGLVDLGVQYFNM-MVRDFGIKT 332
+ G Q + M ++F +T
Sbjct: 243 SLLNLQYGRQLHGLVMKKEFQFET 266
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 80/169 (47%), Gaps = 4/169 (2%)
Query: 195 PNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWEL 254
PN + +L C+ L + G+ +H V K+ D T+L+SMY K + +A ++
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 255 FVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLV 314
++P + I S NA +SG ++G A +F + R G + +T +VL C G +
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDI 145
Query: 315 DLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFK 363
+ G+Q + ++ G + + +V + R G A + + +P K
Sbjct: 146 EGGMQLHCLAMKS-GFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHK 193
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 238 bits (608), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 141/438 (32%), Positives = 229/438 (52%), Gaps = 31/438 (7%)
Query: 7 VTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEV 66
++ LS++A + GN EQA LF ++ S+ + L H+ + S A F R +
Sbjct: 13 ISLTKQLSSYANQ-GNHEQALNLFLQMHS----SFALPLDAHVFSLALKSCAAAF-RPVL 66
Query: 67 KDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYAA 126
+ +++ S + +G A++ Y C + A + F
Sbjct: 67 GGSVHAHSVKSNFLSNPFVG-----------------CALLDMYGKCLSVSHARKLFDEI 109
Query: 127 PVRSVITWTAMITGYMKFGRVESAERLFREMS-LKTLVTWNAMIAGYVENGRAEDG---- 181
P R+ + W AMI+ Y G+V+ A L+ M + ++NA+I G V EDG
Sbjct: 110 PQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGT---EDGSYRA 166
Query: 182 LKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISM 241
++ ++ M+E KPN ++L +++ CS + A +L K++H ++ + + L+
Sbjct: 167 IEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEA 226
Query: 242 YAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITF 301
Y +CG + +F + +D+V+W+++IS YA HG E AL F EM + PD I F
Sbjct: 227 YGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAF 286
Query: 302 VAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMP 361
+ VL AC+HAGL D + YF M D+G++ +HY+C+VD+L R GR EA +I++MP
Sbjct: 287 LNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMP 346
Query: 362 FKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVAR 421
KP +G LLGACR + ++LAE AA+ LL ++P + YV L +Y + R E R
Sbjct: 347 EKPTAKTWGALLGACRNYGEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAER 406
Query: 422 IRRSMKENKVVKAPGYSW 439
+R MKE+ V +PG SW
Sbjct: 407 LRLKMKESGVKVSPGSSW 424
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 86/175 (49%), Gaps = 24/175 (13%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIP----EPNTVSY-NIMLACHLHHFGVG 55
M+ + V W+S++SA+A HG+ E A + F+++ P+ +++ N++ AC H G+
Sbjct: 243 MEDRDVVAWSSLISAYA-LHGDAESALKTFQEMELAKVTPDDIAFLNVLKAC--SHAGLA 299
Query: 56 S-ARAFFDRME-------VKDTASWNTMISGYAQVGLMGEASMLFAVMPEK-NCVSWSAM 106
A +F RM+ KD ++ ++ ++VG EA + MPEK +W A+
Sbjct: 300 DEALVYFKRMQGDYGLRASKD--HYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGAL 357
Query: 107 VSGYVACGDLD----AAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREM 157
+ G+++ AA E P + + + YM GR E AERL +M
Sbjct: 358 LGACRNYGEIELAEIAARELLMVEP-ENPANYVLLGKIYMSVGRQEEAERLRLKM 411
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/305 (38%), Positives = 182/305 (59%)
Query: 136 AMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKP 195
A++ Y G++ A LF + L TWN ++A Y + + ++ + +P
Sbjct: 155 ALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRP 214
Query: 196 NALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELF 255
N LSL +++ C+NL G H V K+ L+ + GTSLI +Y+KCG L A ++F
Sbjct: 215 NELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVF 274
Query: 256 VQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVD 315
++ ++D+ +NAMI G A HG G++ + L+ + G+ PD TFV + AC+H+GLVD
Sbjct: 275 DEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVD 334
Query: 316 LGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGA 375
G+Q FN M +GI+ K EHY C+VDLLGR+GRL EA + IK MP KP+ ++ + LG+
Sbjct: 335 EGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGS 394
Query: 376 CRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAP 435
+ H + + E A K+LL L+ ++ YV L+N+YA NRW V + R MK+++V K+P
Sbjct: 395 SQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSP 454
Query: 436 GYSWI 440
G S +
Sbjct: 455 GISTL 459
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 118/239 (49%), Gaps = 16/239 (6%)
Query: 57 ARAFFDRMEVKDTASWNTMISGYA---QVGLMGEASMLFAVMPEK-NCVSWSAMVSGYVA 112
AR+ F+R+ D A+WNT+++ YA ++ E +LF M + N +S A++ +
Sbjct: 169 ARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIK---S 225
Query: 113 CGDLDAAVECFYAAP--VRSVITW-----TAMITGYMKFGRVESAERLFREMSLKTLVTW 165
C +L V +A +++ +T T++I Y K G + A ++F EMS + + +
Sbjct: 226 CANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCY 285
Query: 166 NAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQV-HQLVC 224
NAMI G +G ++G++L+KS++ G P++ + + CS+ + G Q+ + +
Sbjct: 286 NAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKA 345
Query: 225 KSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK-DIVSWNAMISGYAQHGAGEKA 282
+ L+ + + G L+EA E ++P K + W + + HG E+
Sbjct: 346 VYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERG 404
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 89/182 (48%), Gaps = 17/182 (9%)
Query: 150 AERLFREMSLKTLVTWNAMIAGYVENGRAED---GLKLFKSMLESGA---KPNALSLTSV 203
A + R++ ++ +N +I+ V N + L+ +L S + +PN + S
Sbjct: 59 ALSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPS- 117
Query: 204 LLGCSNLSAL--QLGKQVHQLVCK--SPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIP 259
L S A + G+ +H V K P++ D +L+ YA CG L+EA LF +I
Sbjct: 118 LFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIR 177
Query: 260 RKDIVSWNAMISGYAQH---GAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDL 316
D+ +WN +++ YA + E+ L LF M+ ++P+ ++ VA++ +C + G
Sbjct: 178 EPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQ---VRPNELSLVALIKSCANLGEFVR 234
Query: 317 GV 318
GV
Sbjct: 235 GV 236
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 130/395 (32%), Positives = 215/395 (54%), Gaps = 12/395 (3%)
Query: 56 SARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYV--AC 113
++ + F M ++ SWN +I +++ G ++ LF M ++CV + AC
Sbjct: 85 TSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRAC 144
Query: 114 --------GDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTW 165
GDL V C S+ +A++ Y+ G++ A +LF +M ++ V +
Sbjct: 145 SASREAKSGDL-IHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLY 203
Query: 166 NAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCK 225
AM GYV+ G A GL +F+ M SG +++ + S+L+ C L AL+ GK VH +
Sbjct: 204 TAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIR 263
Query: 226 SPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHL 285
G ++ MY KC L A +FV + R+D++SW+++I GY G + L
Sbjct: 264 RCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKL 323
Query: 286 FDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLG 345
FDEM +G++P+ +TF+ VL AC H GLV+ YF +M +++ I + +HYA + D +
Sbjct: 324 FDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLM-QEYNIVPELKHYASVADCMS 382
Query: 346 RAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQ 405
RAG L EA ++ MP KP A+ G +L C+++ N+++ E A+ L++L P A+ YV
Sbjct: 383 RAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVT 442
Query: 406 LANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWI 440
LA +Y+A R++ +R+ MKE ++ K PG S I
Sbjct: 443 LAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 139/426 (32%), Positives = 231/426 (54%), Gaps = 16/426 (3%)
Query: 42 NIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNC- 100
N ++ + F V SA FD ++ SWN++++G+ EA +F +M ++
Sbjct: 266 NSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVE 325
Query: 101 VSWSAMVSGYVACGDLDAAVEC--FYAAPVR-----SVITWTAMITGYMKFGRVESAERL 153
V +VS C + + C + +R + + +++I Y V+ A +
Sbjct: 326 VDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTV 385
Query: 154 FREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSAL 213
M+ K +V+ + MI+G GR+++ + +F M ++ PNA+++ S+L CS + L
Sbjct: 386 LDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT---PNAITVISLLNACSVSADL 442
Query: 214 QLGKQVHQLVCKSPLS-SDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISG 272
+ K H + + L+ +D + GTS++ YAKCG ++ A F QI K+I+SW +IS
Sbjct: 443 RTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISA 502
Query: 273 YAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKT 332
YA +G +KAL LFDEM+ G P+ +T++A L ACNH GLV G+ F MV + K
Sbjct: 503 YAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEE-DHKP 561
Query: 333 KPEHYACMVDLLGRAGRLPEAVDLIKSMP--FKPHPAIFGTLLGACRIH-KNLDLAEFAA 389
+HY+C+VD+L RAG + AV+LIK++P K + +G +L CR K L +
Sbjct: 562 SLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVV 621
Query: 390 KNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEF 449
+LEL+P ++GY+ ++ +AA+ WE VA +RR +KE KV GYS + + F
Sbjct: 622 AEVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRF 681
Query: 450 RSSDRL 455
+ D+L
Sbjct: 682 LAGDKL 687
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 134/265 (50%), Gaps = 15/265 (5%)
Query: 56 SARAFFDRMEVKDTASWNTMISGYAQ-----VGLMGEASMLFAVMPEKNCVSWSAMVSGY 110
SAR FD M +D SW+ +I Y Q VGL M+ E +CV+ ++++
Sbjct: 177 SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKAC 236
Query: 111 VACGDLDAAVECFYAAPVR------SVITWTAMITGYMKFGRVESAERLFREMSLKTLVT 164
D+D + +R V ++I Y K V+SA R+F E + + +V+
Sbjct: 237 TVMEDIDVG-RSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVS 295
Query: 165 WNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVC 224
WN+++AG+V N R ++ L++F M++ + + +++ S+L C K +H ++
Sbjct: 296 WNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVII 355
Query: 225 KSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALH 284
+ S+ A +SLI Y C + +A + + KD+VS + MISG A G ++A+
Sbjct: 356 RRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAIS 415
Query: 285 LFDEMRHDGMKPDWITFVAVLLACN 309
+F MR P+ IT +++L AC+
Sbjct: 416 IFCHMRD---TPNAITVISLLNACS 437
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/436 (22%), Positives = 172/436 (39%), Gaps = 108/436 (24%)
Query: 61 FDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMP----EKNCVSWSAMV--------- 107
FD M +D+ SWN ++ G G E F+ + E N + ++
Sbjct: 84 FDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSLWFD 143
Query: 108 ----------SGYVACGDLDAAVECFYA-------------APVRSVITWTAMITGYMKF 144
SG+ + ++ C YA R VI+W+ +I Y
Sbjct: 144 GEKIHGYVIRSGFCGISSVQNSILCMYADSDSLSARKLFDEMSERDVISWSVVIRSY--- 200
Query: 145 GRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSML-ESGAKPNALSLTSV 203
V+S E + GLKLFK M+ E+ +P+ +++TSV
Sbjct: 201 --VQSKEPVV--------------------------GLKLFKEMVHEAKTEPDCVTVTSV 232
Query: 204 LLGCSNLSALQLGKQVHQLVCKSPLS-SDTTAGTSLISMYAKCGDLKEAWELFVQIPRKD 262
L C+ + + +G+ VH + +D SLI MY+K D+ A+ +F + ++
Sbjct: 233 LKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRN 292
Query: 263 IVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLAC-------------- 308
IVSWN++++G+ + ++AL +F M + ++ D +T V++L C
Sbjct: 293 IVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHG 352
Query: 309 ---------NHAGLVDLGVQYFNM-MVRDFGIKTKPEHY------ACMVDLLGRAGRLPE 352
N L L Y + +V D G Y + M+ L AGR E
Sbjct: 353 VIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDE 412
Query: 353 AVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFA---------AKNLLELDPSSATGY 403
A+ + M P+ +LL AC + +L +++A A N + + S Y
Sbjct: 413 AISIFCHMRDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAY 472
Query: 404 VQLANVYAAQNRWEHV 419
+ + A+ ++ +
Sbjct: 473 AKCGAIEMARRTFDQI 488
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 95/187 (50%), Gaps = 4/187 (2%)
Query: 141 YMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSL 200
YMK G + S R F M+ + V+WN ++ G ++ G E+GL F + G +PN +L
Sbjct: 71 YMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTL 130
Query: 201 TSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPR 260
V+ C +L G+++H V +S ++ S++ MYA L A +LF ++
Sbjct: 131 VLVIHACRSL--WFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFDEMSE 187
Query: 261 KDIVSWNAMISGYAQHGAGEKALHLFDEMRHDG-MKPDWITFVAVLLACNHAGLVDLGVQ 319
+D++SW+ +I Y Q L LF EM H+ +PD +T +VL AC +D+G
Sbjct: 188 RDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRS 247
Query: 320 YFNMMVR 326
+R
Sbjct: 248 VHGFSIR 254
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 136/317 (42%), Gaps = 49/317 (15%)
Query: 4 KSTVTWNSILSAFAKKHGNFEQARQLF--------------------------EKIP--- 34
++ V+WNSIL+ F +++A ++F + +P
Sbjct: 291 RNIVSWNSILAGFVHNQ-RYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKS 349
Query: 35 ----------EPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGL 84
E N V+ + ++ + V A D M KD S +TMISG A G
Sbjct: 350 IHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGR 409
Query: 85 MGEASMLFAVMPEK-NCVSWSAMVSGYVACGDLDAA-----VECFYAAPVRSVITWTAMI 138
EA +F M + N ++ ++++ DL + + + + + T+++
Sbjct: 410 SDEAISIFCHMRDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIV 469
Query: 139 TGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNAL 198
Y K G +E A R F +++ K +++W +I+ Y NG + L LF M + G PNA+
Sbjct: 470 DAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAV 529
Query: 199 SLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQI 258
+ + L C++ ++ G + + + + + ++ M ++ G++ A EL +
Sbjct: 530 TYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNL 589
Query: 259 P---RKDIVSWNAMISG 272
P + +W A++SG
Sbjct: 590 PEDVKAGASAWGAILSG 606
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%)
Query: 235 GTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGM 294
G S+ Y KCGDL F + +D VSWN ++ G +G E+ L F ++R G
Sbjct: 64 GNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGF 123
Query: 295 KPDWITFVAVLLAC 308
+P+ T V V+ AC
Sbjct: 124 EPNTSTLVLVIHAC 137
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 116/326 (35%), Positives = 200/326 (61%), Gaps = 12/326 (3%)
Query: 135 TAMITGYMKFGRVESAERLFREMSLK-TLVTWNAMIAGYVENGRAEDGLKLFKSMLESGA 193
T+++ Y G V+ A ++F E K +V W AMI+ Y EN + + ++LFK M
Sbjct: 104 TSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKI 163
Query: 194 KPNALSLTSVLLGCSNLSALQLGKQVHQ--LVCKSPLSSDTTAGTSLISMYAKCGDLKEA 251
+ + + +T L C++L A+Q+G++++ + K L+ D T SL++MY K G+ ++A
Sbjct: 164 ELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKA 223
Query: 252 WELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLF------DEMRHDGMKPDWITFVAVL 305
+LF + RKD+ ++ +MI GYA +G +++L LF D+ + + P+ +TF+ VL
Sbjct: 224 RKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVL 283
Query: 306 LACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPH 365
+AC+H+GLV+ G ++F M+ D+ +K + H+ CMVDL R+G L +A + I MP KP+
Sbjct: 284 MACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPN 343
Query: 366 PAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRS 425
I+ TLLGAC +H N++L E + + ELD YV L+N+YA++ W+ +++R
Sbjct: 344 TVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDR 403
Query: 426 MKENKVVKAPGYSWIEISSEVHEFRS 451
+++ ++ PG SWIE+ S ++EF S
Sbjct: 404 VRKRRM---PGKSWIELGSIINEFVS 426
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 11/178 (6%)
Query: 154 FREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSAL 213
F SLK+ N + Y+E+G L F+ P+ + SVL SA
Sbjct: 24 FHTKSLKS----NHTLKQYLESGEPIKALLDFRHRFRQS--PSFVDSFSVLFAIKVSSAQ 77
Query: 214 QL----GKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK-DIVSWNA 268
+ G+Q+H LV K ++ TSL+ Y+ GD+ A ++F + P K +IV W A
Sbjct: 78 KASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTA 137
Query: 269 MISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVR 326
MIS Y ++ +A+ LF M + ++ D + L AC G V +G + ++ ++
Sbjct: 138 MISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIK 195
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 128/289 (44%), Gaps = 38/289 (13%)
Query: 5 STVTWNSILSAFAKKHGNFEQARQLFEKIPEP-NTVSYNIMLACHLHHFGVGSARAFFDR 63
+ + + L F G+ + ARQ+F++ PE N V + M++ + + A F R
Sbjct: 98 AVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKR 157
Query: 64 MEVK----DTASWNTMISGYAQVGL--MGEASMLFAVMPEK----NCVSWSAMVSGYVAC 113
ME + D +S A +G MGE ++ ++ + +++++ YV
Sbjct: 158 MEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKS 217
Query: 114 GDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYV 173
G+ + A + F + + V T+T+MI GY G+ + + LF++M KT+
Sbjct: 218 GETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKM--KTI----------- 264
Query: 174 ENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQ-VHQLVCKSPLSSDT 232
+++D + PN ++ VL+ CS+ ++ GK+ ++ L
Sbjct: 265 --DQSQDTV----------ITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPRE 312
Query: 233 TAGTSLISMYAKCGDLKEAWELFVQIPRK-DIVSWNAMISGYAQHGAGE 280
++ ++ + G LK+A E Q+P K + V W ++ + HG E
Sbjct: 313 AHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVE 361
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 121/349 (34%), Positives = 197/349 (56%), Gaps = 5/349 (1%)
Query: 97 EKNCVSWSAMVSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFRE 156
E + +A+V Y+ G++ A + F P R+ +TW MITG G E A +
Sbjct: 155 ESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEK 214
Query: 157 MSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGA-KPNALSLTSVLLGCSNLSALQL 215
M +T+V+W +I GY + ++ + LF M+ A KPN +++ ++L NL L++
Sbjct: 215 MPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKM 274
Query: 216 GKQVHQLVCKSP-LSSDTTAGTSLISMYAKCGDLKEAWELFVQIP--RKDIVSWNAMISG 272
VH V K + D SLI YAKCG ++ A++ F++IP RK++VSW MIS
Sbjct: 275 CGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISA 334
Query: 273 YAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLG-VQYFNMMVRDFGIK 331
+A HG G++A+ +F +M G+KP+ +T ++VL AC+H GL + +++FN MV ++ I
Sbjct: 335 FAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKIT 394
Query: 332 TKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKN 391
+HY C+VD+L R GRL EA + +P + ++ LLGAC ++ + +LAE +
Sbjct: 395 PDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRK 454
Query: 392 LLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWI 440
L+EL+ S YV ++N++ R+ R R+ M V K PG+S +
Sbjct: 455 LMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 139/278 (50%), Gaps = 17/278 (6%)
Query: 21 GNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYA 80
GN A ++F+++PE N V++N+M+ + A F ++M + SW T+I GYA
Sbjct: 172 GNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYA 231
Query: 81 QVGLMGEASMLFAVMP-----EKNCVSWSAMVSGYVACGDLD--AAVECFYA----APVR 129
+V EA +LF+ M + N ++ A++ GDL +V + P
Sbjct: 232 RVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCD 291
Query: 130 SVITWTAMITGYMKFGRVESAERLFREM--SLKTLVTWNAMIAGYVENGRAEDGLKLFKS 187
+T ++I Y K G ++SA + F E+ K LV+W MI+ + +G ++ + +FK
Sbjct: 292 IRVT-NSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKD 350
Query: 188 MLESGAKPNALSLTSVLLGCSN--LSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKC 245
M G KPN +++ SVL CS+ L+ + + + +V + ++ D L+ M +
Sbjct: 351 MERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRK 410
Query: 246 GDLKEAWELFVQIP-RKDIVSWNAMISGYAQHGAGEKA 282
G L+EA ++ ++IP + V W ++ + + E A
Sbjct: 411 GRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELA 448
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 229 bits (583), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 125/363 (34%), Positives = 187/363 (51%), Gaps = 11/363 (3%)
Query: 207 CSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSW 266
C LQ K VH + S D ++ L+ MY+ CG EA +F ++ K++ +W
Sbjct: 264 CGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETW 323
Query: 267 NAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVR 326
+I +A++G GE A+ +F + +G PD F + AC G VD G+ +F M R
Sbjct: 324 CIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSR 383
Query: 327 DFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAE 386
D+GI E Y +V++ G L EA++ ++ MP +P+ ++ TL+ R+H NL+L +
Sbjct: 384 DYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGD 443
Query: 387 FAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEV 446
+ A+ + LDP+ Q+R E ++ S E + +K + S +
Sbjct: 444 YCAEVVEFLDPTRLN----------KQSR-EGFIPVKASDVEKESLKKRSGILHGVKSSM 492
Query: 447 HEFRSSDRLHPELASIHXXXXXXXXXXXXAGYVPDLEFALHDVGEELKEQLLLWHSEKLA 506
EFR+ D PE + GYV + ALHD+ +E KE LLL HSE++A
Sbjct: 493 QEFRAGDTNLPENDELFQLLRNLKMHMVEVGYVAETRMALHDIDQESKETLLLGHSERIA 552
Query: 507 IAYGLLKVPLGLPIRVFKNLRVCGDCHTAIKYISAIEGREIIVRDTTRFHHFKDGFCSCS 566
A +L P V KNLRVC DCH A+K +S I GRE+I RD RFH K+G C+C
Sbjct: 553 FARAVLNSAPRKPFTVIKNLRVCVDCHNALKIMSDIVGREVITRDIKRFHQMKNGACTCK 612
Query: 567 DYW 569
DYW
Sbjct: 613 DYW 615
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 2/143 (1%)
Query: 137 MITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPN 196
++ Y G A +F +MS K L TW +I + +NG ED + +F E G P+
Sbjct: 295 LLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPD 354
Query: 197 ALSLTSVLLGCSNLSALQLGKQVHQLVCKS-PLSSDTTAGTSLISMYAKCGDLKEAWELF 255
+ C L + G + + + ++ SL+ MYA G L EA E
Sbjct: 355 GQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFV 414
Query: 256 VQIPRK-DIVSWNAMISGYAQHG 277
++P + ++ W +++ HG
Sbjct: 415 ERMPMEPNVDVWETLMNLSRVHG 437
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 228 bits (582), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 123/360 (34%), Positives = 194/360 (53%), Gaps = 8/360 (2%)
Query: 94 VMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERL 153
V+P +N +++ Y CG LD A + F P R +++W ++I G ++ G V +A +L
Sbjct: 152 VLPVQN-----SLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKL 206
Query: 154 FREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSAL 213
F EM K +++WN MI+ Y+ + LF+ M+ +G + N +L +L C + L
Sbjct: 207 FDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARL 266
Query: 214 QLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGY 273
+ G+ VH + ++ L+S T+LI MY KC ++ A +F + ++ V+WN MI +
Sbjct: 267 KEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAH 326
Query: 274 AQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTK 333
HG E L LF+ M + ++PD +TFV VL C AGLV G Y+++MV +F IK
Sbjct: 327 CLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPN 386
Query: 334 PEHYACMVDLLGRAGRLPEAVDLIKSMP---FKPHPAIFGTLLGACRIHKNLDLAEFAAK 390
H CM +L AG EA + +K++P P + LL + R N L E AK
Sbjct: 387 FGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAK 446
Query: 391 NLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFR 450
+L+E DP + Y L N+Y+ RWE V R+R +KE K+ + PG +++ VH R
Sbjct: 447 SLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVHGLR 506
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 125/253 (49%), Gaps = 9/253 (3%)
Query: 21 GNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYA 80
G + A++LF +IP+ + VS+N ++A + + V +A FD M K+ SWN MIS Y
Sbjct: 167 GALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYL 226
Query: 81 QVGLMGEASMLFAVMPEKNCV-SWSAMVSGYVACGDLDAAVE--CFYAAPVR-----SVI 132
G + LF M + S +V ACG E +A+ +R SV+
Sbjct: 227 GANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVV 286
Query: 133 TWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESG 192
TA+I Y K V A R+F +S++ VTWN MI + +GR E GL+LF++M+
Sbjct: 287 IDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGM 346
Query: 193 AKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKS-PLSSDTTAGTSLISMYAKCGDLKEA 251
+P+ ++ VL GC+ + G+ + L+ + + + ++Y+ G +EA
Sbjct: 347 LRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEA 406
Query: 252 WELFVQIPRKDIV 264
E +P +D+
Sbjct: 407 EEALKNLPDEDVT 419
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 120/276 (43%), Gaps = 14/276 (5%)
Query: 85 MGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECF--YAAPVRSVITWTA-----M 137
M +AS + + + V + ++ G+ D ++ F +A + S W + +
Sbjct: 1 MAKASSIRQFVTSRFIVPGTGLLKGFKLVEDSNSITHLFQVHARLITSGNFWDSSWAIRL 60
Query: 138 ITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNA 197
+ +FG ++R S+ L N + Y+ + + L + +L G P++
Sbjct: 61 LKSSSRFGDSSYTVSIYR--SIGKLYCANPVFKAYLVSSSPKQALGFYFDILRFGFVPDS 118
Query: 198 LSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQ 257
+ S++ + GK H K SL+ MY CG L A +LFV+
Sbjct: 119 YTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVE 178
Query: 258 IPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLG 317
IP++DIVSWN++I+G ++G A LFDEM D W ++ L N+ G +
Sbjct: 179 IPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEM-PDKNIISWNIMISAYLGANNPG---VS 234
Query: 318 VQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEA 353
+ F MVR G + +++ GR+ RL E
Sbjct: 235 ISLFREMVRA-GFQGNESTLVLLLNACGRSARLKEG 269
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 228 bits (582), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 154/535 (28%), Positives = 255/535 (47%), Gaps = 90/535 (16%)
Query: 4 KSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLA----CHLHHFGVGSARA 59
K+T+TWN L K +G A LF+++PE + VS+N M++ C H +G+ R
Sbjct: 68 KNTITWNVCLKGLFK-NGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGI---RV 123
Query: 60 FFD--RMEVKDT----------------------------------ASWNTMISGYAQVG 83
FFD R E++ T WN+++ Y ++G
Sbjct: 124 FFDMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLG 183
Query: 84 LMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVE---------------------- 121
+ A +F M +++ VSW+ ++ G+ + A++
Sbjct: 184 VFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVS 243
Query: 122 -----------------CFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVT 164
C + + I A I + K R++ + +LFRE+ V
Sbjct: 244 ICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVL 303
Query: 165 WNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQL--GKQVHQL 222
N+MI Y + ED L+LF + +P+ + +SVL S+++A+ L G VH L
Sbjct: 304 CNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVL---SSMNAVMLDHGADVHSL 360
Query: 223 VCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKA 282
V K DT TSL+ MY K G + A +F + KD++ WN +I G A++ ++
Sbjct: 361 VIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVES 420
Query: 283 LHLFDEM-RHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMV 341
L +F+++ + +KPD +T + +L+AC +AG V+ G+Q F+ M + G+ EHYAC++
Sbjct: 421 LAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACII 480
Query: 342 DLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSAT 401
+LL R G + EA D+ +PF+P I+ +L A + LAE AK +LE +P S+
Sbjct: 481 ELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSF 540
Query: 402 GYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLH 456
Y+ L +Y RWE+ ++R +M E+K+ A G S I I S V F +D+L
Sbjct: 541 PYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSFE-ADQLQ 594
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 155/327 (47%), Gaps = 7/327 (2%)
Query: 6 TVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRME 65
T W + K G+ A QLF+ IP+ NT+++N+ L + + +A FD M
Sbjct: 38 TTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMP 97
Query: 66 VKDTASWNTMISGYAQVGLMGEASMLF------AVMPEKNCVSWSAMVSGYVACGDLDAA 119
+D SWNTMISG G +F + P + S A + V G+
Sbjct: 98 ERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQIHG 157
Query: 120 VECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAE 179
+++ W +++ Y + G + A +F M + +V+WN +I ++G E
Sbjct: 158 NAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKE 217
Query: 180 DGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLI 239
L F M E +P+ +++ V+ CS+L L GKQ L K S++ + I
Sbjct: 218 VALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGI 277
Query: 240 SMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWI 299
M++KC L ++ +LF ++ + D V N+MI Y+ H GE AL LF ++PD
Sbjct: 278 DMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKF 337
Query: 300 TFVAVLLACNHAGLVDLGVQYFNMMVR 326
TF +VL + N A ++D G +++++
Sbjct: 338 TFSSVLSSMN-AVMLDHGADVHSLVIK 363
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
Query: 215 LGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYA 274
L K VH + ++ T G + +Y K G + A +LF IP K+ ++WN + G
Sbjct: 22 LAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLF 81
Query: 275 QHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVR 326
++G AL LFDEM + W T ++ L++C G + G++ F M R
Sbjct: 82 KNGYLNNALDLFDEMPERDV-VSWNTMISGLVSC---GFHEYGIRVFFDMQR 129
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 228 bits (581), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 140/412 (33%), Positives = 210/412 (50%), Gaps = 26/412 (6%)
Query: 70 ASWNTMISGYAQVGLMGEASMLFAVMPE--------------KNCVSWSAMVSGYVACGD 115
++WN + GY+ E+ +++ M K C S+ + +G
Sbjct: 79 STWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGR----- 133
Query: 116 LDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVEN 175
VE V +I Y + A ++F EM+ + +V+WN+++ VEN
Sbjct: 134 -QIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVEN 192
Query: 176 GRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAG 235
G+ + F M+ P+ ++ +L C L LGK VH V L + G
Sbjct: 193 GKLNLVFECFCEMIGKRFCPDETTMVVLLSACGG--NLSLGKLVHSQVMVRELELNCRLG 250
Query: 236 TSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEM-RHDGM 294
T+L+ MYAK G L+ A +F ++ K++ +W+AMI G AQ+G E+AL LF +M + +
Sbjct: 251 TALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSV 310
Query: 295 KPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAV 354
+P+++TF+ VL AC+H GLVD G +YF+ M + IK HY MVD+LGRAGRL EA
Sbjct: 311 RPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAY 370
Query: 355 DLIKSMPFKPHPAIFGTLLGACRIHKNLD---LAEFAAKNLLELDPSSATGYVQLANVYA 411
D IK MPF+P ++ TLL AC IH + D + E K L+EL+P + V +AN +A
Sbjct: 371 DFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFA 430
Query: 412 AQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIH 463
W A +RR MKE K+ K G S +E+ H F S E SI+
Sbjct: 431 EARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFFSGYDPRSEYVSIY 482
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 114/253 (45%), Gaps = 19/253 (7%)
Query: 49 LHHFGV----GSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKN-CVSW 103
+H +G AR FD M ++ SWN++++ + G + F M K C
Sbjct: 155 IHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDE 214
Query: 104 SAMVSGYVAC-GDLDAAVECFYAAPVRSV----ITWTAMITGYMKFGRVESAERLFREMS 158
+ MV AC G+L VR + TA++ Y K G +E A +F M
Sbjct: 215 TTMVVLLSACGGNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMV 274
Query: 159 LKTLVTWNAMIAGYVENGRAEDGLKLFKSML-ESGAKPNALSLTSVLLGCSNLSALQLG- 216
K + TW+AMI G + G AE+ L+LF M+ ES +PN ++ VL CS+ + G
Sbjct: 275 DKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGY 334
Query: 217 KQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIP-RKDIVSWNAMISGYAQ 275
K H++ + +++ + + G L EA++ ++P D V W ++S +
Sbjct: 335 KYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSI 394
Query: 276 H------GAGEKA 282
H G GEK
Sbjct: 395 HHDEDDEGIGEKV 407
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 5/205 (2%)
Query: 150 AERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSN 209
A L S T TWN + GY + + + ++ M G KPN L+ +L C++
Sbjct: 66 ARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACAS 125
Query: 210 LSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAM 269
L G+Q+ V K D G +LI +Y C +A ++F ++ +++VSWN++
Sbjct: 126 FLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSI 185
Query: 270 ISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLG-VQYFNMMVRDF 328
++ ++G F EM PD T V +L AC G + LG + + +MVR+
Sbjct: 186 MTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSAC--GGNLSLGKLVHSQVMVREL 243
Query: 329 GIKTKPEHYACMVDLLGRAGRLPEA 353
+ + +VD+ ++G L A
Sbjct: 244 ELNCRLG--TALVDMYAKSGGLEYA 266
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 129/381 (33%), Positives = 217/381 (56%), Gaps = 17/381 (4%)
Query: 57 ARAFFDRMEVKDTA--SWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYV-AC 113
A FDRM +D++ +WN++ISGYA++G +A L+ M E + AC
Sbjct: 146 AHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKAC 205
Query: 114 GDLDAAV--ECFYAAPVR-----SVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWN 166
G + + E + V+ V A++ Y K G + A +F + K V+WN
Sbjct: 206 GGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWN 265
Query: 167 AMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKS 226
+M+ GY+ +G + L +F+ M+++G +P+ ++++SVL + + + + G+Q+H V +
Sbjct: 266 SMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRR 322
Query: 227 PLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLF 286
+ + + +LI +Y+K G L +A +F Q+ +D VSWNA+IS ++++ G L F
Sbjct: 323 GMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNG---LKYF 379
Query: 287 DEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGR 346
++M KPD ITFV+VL C + G+V+ G + F++M +++GI K EHYACMV+L GR
Sbjct: 380 EQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGR 439
Query: 347 AGRLPEAVDLI-KSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQ 405
AG + EA +I + M + P ++G LL AC +H N D+ E AA+ L EL+P + +
Sbjct: 440 AGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFEL 499
Query: 406 LANVYAAQNRWEHVARIRRSM 426
L +Y+ R E V R+R+ M
Sbjct: 500 LIRIYSKAKRAEDVERVRQMM 520
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 99/173 (57%), Gaps = 2/173 (1%)
Query: 135 TAMITGYMKFGRVESAERLFREMSLK--TLVTWNAMIAGYVENGRAEDGLKLFKSMLESG 192
+ ++ Y G E A +F MS + + WN++I+GY E G+ ED + L+ M E G
Sbjct: 131 SKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDG 190
Query: 193 AKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAW 252
KP+ + VL C + ++Q+G+ +H+ + K D +L+ MYAKCGD+ +A
Sbjct: 191 VKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKAR 250
Query: 253 ELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVL 305
+F IP KD VSWN+M++GY HG +AL +F M +G++PD + +VL
Sbjct: 251 NVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL 303
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 127/251 (50%), Gaps = 16/251 (6%)
Query: 189 LESGAKPNALSLT------SVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMY 242
LE+ A+ +SLT S+L C +L A+ G +VH L+ L ++ + L+ +Y
Sbjct: 79 LETSAQ-KGISLTEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLY 137
Query: 243 AKCGDLKEAWELFVQIPRKDI--VSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWIT 300
A CG + A E+F ++ ++D +WN++ISGYA+ G E A+ L+ +M DG+KPD T
Sbjct: 138 ASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFT 197
Query: 301 FVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSM 360
F VL AC G V +G +V++ G +V + + G + +A ++ +
Sbjct: 198 FPRVLKACGGIGSVQIGEAIHRDLVKE-GFGYDVYVLNALVVMYAKCGDIVKARNVFDMI 256
Query: 361 PFKPHPAIFGTLLGACR---IHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQN-RW 416
P K + + L G +H+ LD+ +N +E D + + LA V + ++ R
Sbjct: 257 PHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSV--LARVLSFKHGRQ 314
Query: 417 EHVARIRRSMK 427
H IRR M+
Sbjct: 315 LHGWVIRRGME 325
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 136/420 (32%), Positives = 223/420 (53%), Gaps = 28/420 (6%)
Query: 61 FDRMEVKDTASWNTMISGYAQVGLMGEASMLF------AVMPEKNCVSWSAMVSGYVACG 114
F R+ + SWN++ISG ++ G GE +ML P + ++SA +S
Sbjct: 358 FGRIHNPNLVSWNSIISGCSENGF-GEQAMLMYRRLLRMSTPRPDEYTFSAAISA----- 411
Query: 115 DLDAAVECFYAAPV-----------RSVITWTAMITGYMKFGRVESAERLFREMSLKTLV 163
A E F + RSV T +++ Y K ESA+++F M + +V
Sbjct: 412 --TAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVV 469
Query: 164 TWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLV 223
W MI G+ G +E ++ F M + + SL+SV+ CS+++ L+ G+ H L
Sbjct: 470 LWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLA 529
Query: 224 CKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKAL 283
++ + +L+ MY K G + A +F D+ WN+M+ Y+QHG EKAL
Sbjct: 530 IRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKAL 589
Query: 284 HLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDL 343
F+++ +G PD +T++++L AC+H G G +N M ++ GIK +HY+CMV+L
Sbjct: 590 SFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQM-KEQGIKAGFKHYSCMVNL 648
Query: 344 LGRAGRLPEAVDLI-KSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATG 402
+ +AG + EA++LI +S P ++ TLL AC +NL + +AA+ +L+LDP
Sbjct: 649 VSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTAT 708
Query: 403 YVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEI-SSEVHEFRSSDRLHPELAS 461
++ L+N+YA RWE VA +RR ++ K PG SWIE+ ++ F S D+ +PE+ S
Sbjct: 709 HILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGDQSNPEVVS 768
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 137/276 (49%), Gaps = 41/276 (14%)
Query: 73 NTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGD-------LDAAVECFYA 125
N +IS Y + G + +A +F MP +N VS++A+ S Y D L + Y
Sbjct: 136 NNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYV 195
Query: 126 APVRS---------------------------------VITWTAMITGYMKFGRVESAER 152
P S V+ T+++ Y G +ESA R
Sbjct: 196 KPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARR 255
Query: 153 LFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSA 212
+F ++ + V WN MI G ++N + EDGL F++ML SG P + + VL GCS L +
Sbjct: 256 IFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGS 315
Query: 213 LQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISG 272
LGK +H + S +D +L+ MY CGD++EA+ +F +I ++VSWN++ISG
Sbjct: 316 YSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISG 375
Query: 273 YAQHGAGEKALHLFDE-MRHDGMKPDWITFVAVLLA 307
+++G GE+A+ ++ +R +PD TF A + A
Sbjct: 376 CSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISA 411
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 149/325 (45%), Gaps = 48/325 (14%)
Query: 10 NSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDT 69
N+++S + + + EQAR++F+K+P+ N V+ FG+ A F+ + +
Sbjct: 26 NNLISMYVR-CSSLEQARKVFDKMPQRNIVTL----------FGLS---AVFEYVSMGS- 70
Query: 70 ASWNTMISGYAQVGLMGEASMLFAVMP-----------EKNCVSWSAM-----VSGYVAC 113
S ++Q+ +G M+F MP + CVS + + + V
Sbjct: 71 -------SLHSQIIKLGSFQMIF-FMPLNEIASSVVELTRKCVSITVLKRARQIHALVLT 122
Query: 114 GDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYV 173
AA E YA +I+ Y++ G +E A ++F +M + +V++NA+ + Y
Sbjct: 123 AGAGAATESPYAN--------NNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYS 174
Query: 174 ENGR-AEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDT 232
N A L M KPN+ + TS++ C+ L + +G ++ + K S +
Sbjct: 175 RNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNV 234
Query: 233 TAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHD 292
TS++ MY+ CGDL+ A +F + +D V+WN MI G ++ E L F M
Sbjct: 235 VVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMS 294
Query: 293 GMKPDWITFVAVLLACNHAGLVDLG 317
G+ P T+ VL C+ G LG
Sbjct: 295 GVDPTQFTYSIVLNGCSKLGSYSLG 319
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 129/405 (31%), Positives = 213/405 (52%), Gaps = 21/405 (5%)
Query: 61 FDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCV-SWSAMVSGYVACGDLDAA 119
FD+MEVK+ SW MISG LF M +N + ++S AC +L+
Sbjct: 208 FDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELN-- 265
Query: 120 VECFYAAPVRSVITWT-------------AMITGYMKFGRVESAERLFREMSLKTLVTWN 166
+ ++ V+ + ++ A +T Y + G V + LF ++ +V W+
Sbjct: 266 ---YGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWS 322
Query: 167 AMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKS 226
+MI+GY E G + + L M + G + N+++L +++ C+N + L VH + K
Sbjct: 323 SMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKC 382
Query: 227 PLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLF 286
S G +LI MYAKCG L A E+F ++ KD+VSW++MI+ Y HG G +AL +F
Sbjct: 383 GFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIF 442
Query: 287 DEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGR 346
M G + D + F+A+L ACNHAGLV+ F + + + EHYAC ++LLGR
Sbjct: 443 KGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGK-YHMPVTLEHYACYINLLGR 501
Query: 347 AGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLA-EFAAKNLLELDPSSATGYVQ 405
G++ +A ++ +MP KP I+ +LL AC H LD+A + A L++ +P + YV
Sbjct: 502 FGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVL 561
Query: 406 LANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFR 450
L+ ++ + +RR M+ K+ K G+S IE ++ +++
Sbjct: 562 LSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIEPELQIEDYQ 606
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 170/338 (50%), Gaps = 12/338 (3%)
Query: 37 NTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMP 96
+TV N +++ + + R FD M +DT S+ ++I+ Q GL+ EA L M
Sbjct: 81 DTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMY 140
Query: 97 EKNCVSWSAMVSGYVAC----GDLDAAVECFYAAPV------RSVITWTAMITGYMKFGR 146
+ S +V+ +A G F+A + SV+ TA++ Y+KF
Sbjct: 141 FYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDD 200
Query: 147 VESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLG 206
+A +F +M +K V+W AMI+G V N E G+ LF++M +PN ++L SVL
Sbjct: 201 HAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPA 260
Query: 207 CSNLS-ALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVS 265
C L+ L K++H + +D + ++MY +CG++ + LF +D+V
Sbjct: 261 CVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVM 320
Query: 266 WNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMV 325
W++MISGYA+ G + ++L ++MR +G++ + +T +A++ AC ++ L+ + ++
Sbjct: 321 WSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQIL 380
Query: 326 RDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFK 363
+ G + ++D+ + G L A ++ + K
Sbjct: 381 K-CGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEK 417
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 96/189 (50%), Gaps = 2/189 (1%)
Query: 122 CFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDG 181
C A + ++I+ Y KF R + ++F EM + V++ ++I ++G +
Sbjct: 73 CLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEA 132
Query: 182 LKLFKSMLESGAKPNALSLTSVLLGCSNL-SALQLGKQVHQLV-CKSPLSSDTTAGTSLI 239
+KL K M G P + + S+L C+ + S+ ++ + H LV + T+L+
Sbjct: 133 MKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALV 192
Query: 240 SMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWI 299
MY K D A+ +F Q+ K+ VSW AMISG + E + LF M+ + ++P+ +
Sbjct: 193 DMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRV 252
Query: 300 TFVAVLLAC 308
T ++VL AC
Sbjct: 253 TLLSVLPAC 261
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 2/173 (1%)
Query: 155 REMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLES-GAKPNALSLTSVLLGCS-NLSA 212
R +S + + + G V + ++ L+L+K + S G L SV+ C+
Sbjct: 3 RALSSRLNLELGNKLKGLVSDQFYDEALRLYKLKIHSLGTNGFTAILPSVIKACAFQQEP 62
Query: 213 LQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISG 272
LG Q+H L K+ DT SLISMYAK ++F ++ +D VS+ ++I+
Sbjct: 63 FLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINS 122
Query: 273 YAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMV 325
Q G +A+ L EM G P ++L C G + F+ +V
Sbjct: 123 CCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALV 175
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 137/472 (29%), Positives = 243/472 (51%), Gaps = 37/472 (7%)
Query: 4 KSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVS-------YNIMLACHLHH---FG 53
+ V+WNS++SAF++ +G +A+ LF+++ + S I+ +C FG
Sbjct: 458 RDLVSWNSMISAFSQ-NGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFG 516
Query: 54 ---------VGSARAFFDRMEV----KDTASWNTMISGYAQVGLMGEASMLFAVMPEKNC 100
+G + F R+E +D SWN++ISG A G E+ F M +
Sbjct: 517 KSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGK 576
Query: 101 VSWS--AMVSGYVACGDLDAAVE--CFYAAPVRSVITW-----TAMITGYMKFGRVESAE 151
+ ++ A G+L ++ CF+ ++S+ +IT Y + +ESA
Sbjct: 577 IRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAV 636
Query: 152 RLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLS 211
++F +S L +WN +I+ +N + +LF+++ +PN ++ +L + L
Sbjct: 637 KVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNL---KLEPNEITFVGLLSASTQLG 693
Query: 212 ALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMIS 271
+ G Q H + + ++ +L+ MY+ CG L+ ++F I +WN++IS
Sbjct: 694 STSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVIS 753
Query: 272 GYAQHGAGEKALHLFDEMRHDG-MKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGI 330
+ HG GEKA+ LF E+ + M+P+ +F+++L AC+H+G +D G+ Y+ M FG+
Sbjct: 754 AHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGV 813
Query: 331 KTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAK 390
K EH +VD+LGRAG+L EA + I + ++G LL AC H + L + A+
Sbjct: 814 KPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAE 873
Query: 391 NLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEI 442
L E++P +A+ Y+ LAN Y WE R+R+ +++N + K PGYS I++
Sbjct: 874 VLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVIDV 925
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 154/319 (48%), Gaps = 11/319 (3%)
Query: 56 SARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEK-NCVSWSAMVSGYVACG 114
S+ FD ++ KD WN+MI+ Q G A LF M K N + ++ A
Sbjct: 140 SSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALS 199
Query: 115 DLDAAVEC-------FYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNA 167
L + +C V A++ Y K + SAE +F M + +V+WN
Sbjct: 200 SLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNT 259
Query: 168 MIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSP 227
++ + NG L+ FKSM SG + + ++ + V+ CS++ L LG+ +H LV KS
Sbjct: 260 IMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSG 319
Query: 228 LSSD--TTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHL 285
S + + G S+ISMY+KCGD + A +F ++ +D++S NA+++G+A +G E+A +
Sbjct: 320 YSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGI 379
Query: 286 FDEMRH-DGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLL 344
++M+ D ++PD T V++ C G VR E ++D+
Sbjct: 380 LNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMY 439
Query: 345 GRAGRLPEAVDLIKSMPFK 363
G+ G +A L K+ +
Sbjct: 440 GKCGLTTQAELLFKTTTHR 458
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 137/281 (48%), Gaps = 20/281 (7%)
Query: 54 VGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMP----EKNCVSWSAMVSG 109
+ SA F ME +D SWNT+++ G ++ F M E + V++S ++S
Sbjct: 239 LSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVIS- 297
Query: 110 YVACGDLDAAV--ECFYAAPVRS-------VITWTAMITGYMKFGRVESAERLFREMSLK 160
AC ++ E + ++S V ++I+ Y K G E+AE +F E+ +
Sbjct: 298 --ACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCR 355
Query: 161 TLVTWNAMIAGYVENGRAEDGLKLFKSMLE-SGAKPNALSLTSVLLGCSNLSALQLGKQV 219
+++ NA++ G+ NG E+ + M +P+ ++ S+ C +LS + G+ V
Sbjct: 356 DVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAV 415
Query: 220 HQLVCKSPLSSDT-TAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGA 278
H + + S S+I MY KCG +A LF +D+VSWN+MIS ++Q+G
Sbjct: 416 HGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGF 475
Query: 279 GEKALHLFDEM--RHDGMKPDWITFVAVLLACNHAGLVDLG 317
KA +LF E+ + K T +A+L +C+ + + G
Sbjct: 476 THKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFG 516
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 107/210 (50%), Gaps = 2/210 (0%)
Query: 119 AVECF--YAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENG 176
+V CF ++ + T + ++T Y + G + S+ LF E+ K ++ WN+MI +NG
Sbjct: 108 SVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNG 167
Query: 177 RAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGT 236
R + LF M+ G + ++ +L S+L + +H L ++ L D++
Sbjct: 168 RYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCN 227
Query: 237 SLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKP 296
+L+++YAK +L A +F + +DIVSWN +++ +G K+L F M G +
Sbjct: 228 ALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEA 287
Query: 297 DWITFVAVLLACNHAGLVDLGVQYFNMMVR 326
D +TF V+ AC+ + LG ++++
Sbjct: 288 DTVTFSCVISACSSIEELTLGESLHGLVIK 317
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%)
Query: 217 KQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQH 276
+ VH K L D + L++ Y + G+L + LF ++ KD++ WN+MI+ Q+
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQN 166
Query: 277 GAGEKALHLFDEMRHDGMKPD 297
G A+ LF EM H G + D
Sbjct: 167 GRYIAAVGLFIEMIHKGNEFD 187
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 225 bits (574), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 144/402 (35%), Positives = 210/402 (52%), Gaps = 19/402 (4%)
Query: 54 VGSARAFFDRM-EVKDTASWNTMISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVS 108
+ AR FD M + D +++T+++GY QV A LF +M + N + + +S
Sbjct: 176 ISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLS 235
Query: 109 GYVACGDLDAA----VECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVT 164
GDL A V C + TA+I Y K G + SA R+F K +VT
Sbjct: 236 AISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVT 295
Query: 165 WNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVC 224
WN MI Y + G E+ + L + M KPN+ + +L C+ A +G+ V L+
Sbjct: 296 WNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLE 355
Query: 225 KSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALH 284
+ ++ D GT+L+ MYAK G L++A E+F ++ KD+ SW AMISGY HG +A+
Sbjct: 356 EERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVT 415
Query: 285 LFDEMRHDGMK--PDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVD 342
LF++M + K P+ ITF+ VL AC+H GLV G++ F MV + K EHY C+VD
Sbjct: 416 LFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVD 475
Query: 343 LLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATG 402
LLGRAG+L EA +LI+++P + LL ACR++ N DL E L E+ +
Sbjct: 476 LLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPAD 535
Query: 403 YVQLANVYAAQNRWEHVARIRRSMKE--NKVVKAPGYSWIEI 442
+ LA +A E +S+ NK K GYS IEI
Sbjct: 536 AILLAGTHAVAGNPE------KSLDNELNKGRKEAGYSAIEI 571
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 121/274 (44%), Gaps = 21/274 (7%)
Query: 53 GVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMP-EKNCVSWSAMVSGYV 111
G+ SAR FD KD +WN MI YA+ GL+ E L M EK + S V
Sbjct: 277 GISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLS 336
Query: 112 ACGDLDAAVECFYAAPV-------RSVITWTAMITGYMKFGRVESAERLFREMSLKTLVT 164
+C +AA A + I TA++ Y K G +E A +F M K + +
Sbjct: 337 SCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKS 396
Query: 165 WNAMIAGYVENGRAEDGLKLFKSMLESGAK--PNALSLTSVLLGCSNLSALQLG-KQVHQ 221
W AMI+GY +G A + + LF M E K PN ++ VL CS+ + G + +
Sbjct: 397 WTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKR 456
Query: 222 LVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIP-RKDIVSWNAMISG---YAQHG 277
+V + ++ + + G L+EA+EL +P D +W A+++ Y
Sbjct: 457 MVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNAD 516
Query: 278 AGEKALHLFDEMRHDGMKPDWITFVAVLLACNHA 311
GE + EM + D A+LLA HA
Sbjct: 517 LGESVMMRLAEM-GETHPAD-----AILLAGTHA 544
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 131/324 (40%), Gaps = 43/324 (13%)
Query: 147 VESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLG 206
+ A +F +S L +N MI GY + E +F + G + S + L
Sbjct: 75 IRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKS 134
Query: 207 CSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK-DIVS 265
CS + +G+ +H + +S T +LI Y CG + +A ++F ++P+ D V+
Sbjct: 135 CSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVT 194
Query: 266 WNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLA----------------CN 309
++ +++GY Q AL LF MR + + T ++ L A C
Sbjct: 195 FSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCI 254
Query: 310 HAGLVDLGVQYFNMMVRDFG---------------IKTKPEHYACMVDLLGRAGRLPEAV 354
GL DL + ++ +G I+ + CM+D + G L E V
Sbjct: 255 KIGL-DLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECV 313
Query: 355 DLIKSMPF---KPHPAIFGTLLGACRIHK----NLDLAEFAAKNLLELDPSSATGYVQLA 407
L++ M + KP+ + F LL +C + +A+ + + LD T L
Sbjct: 314 WLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTA---LV 370
Query: 408 NVYAAQNRWEHVARIRRSMKENKV 431
++YA E I MK+ V
Sbjct: 371 DMYAKVGLLEKAVEIFNRMKDKDV 394
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 98/221 (44%), Gaps = 9/221 (4%)
Query: 189 LESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDL 248
LES P L + L C + + ++H + K+ L D A + L++ ++ D+
Sbjct: 20 LESLLSPQCQKLINDLRSCRDTVEVS---RIHGYMVKTGLDKDDFAVSKLLA-FSSVLDI 75
Query: 249 KEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLAC 308
+ A +F + ++ +N MI GY+ E+A +F+++R G+ D +F+ L +C
Sbjct: 76 RYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSC 135
Query: 309 NHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAI 368
+ V +G + +R G + ++ G++ +A + MP
Sbjct: 136 SRELCVSIGEGLHGIALRS-GFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVT 194
Query: 369 FGTLL-GACRIHKN---LDLAEFAAKNLLELDPSSATGYVQ 405
F TL+ G ++ K LDL K+ + ++ S+ ++
Sbjct: 195 FSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLS 235
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 224 bits (572), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 135/394 (34%), Positives = 212/394 (53%), Gaps = 28/394 (7%)
Query: 61 FDRMEVKDTASWNTMISGYAQVGLMGEA------SMLFAVMPEKNCVSWSAMVSGYVACG 114
F+R+ +KD ++N + GY Q+G +A L V P+ + M+ C
Sbjct: 459 FERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSR--TMVGMLQTCAFCS 516
Query: 115 DLDAAVECFYAAPVR-----SVITWTAMITGYMKFGRVESAERLFREMSL-KTLVTWNAM 168
D A C Y ++ A+I + K + +A LF + K+ V+WN M
Sbjct: 517 DY-ARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIM 575
Query: 169 IAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPL 228
+ GY+ +G+AE+ + F+ M +PNA++ +++ + LSAL++G VH + +
Sbjct: 576 MNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGF 635
Query: 229 SSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDE 288
S T G SL+ MYAKCG ++ + + F++I K IVSWN M+S YA HG A+ LF
Sbjct: 636 CSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLS 695
Query: 289 MRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAG 348
M+ + +KPD ++F++VL AC HAGLV+ G + F M I+ + EHYACMVDLLG+AG
Sbjct: 696 MQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAG 755
Query: 349 RLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLAN 408
EAV++++ M K ++G LL + R+H NL L+ A L++L+P + + Y Q
Sbjct: 756 LFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSHYSQDRR 815
Query: 409 VYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEI 442
+ N V+RI+ K P SWIE+
Sbjct: 816 LGEVNN----VSRIK---------KVPACSWIEV 836
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 126/451 (27%), Positives = 214/451 (47%), Gaps = 55/451 (12%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIP----EPNTVS-YNIMLA--------- 46
M VK VTWN+++S A+ +G A LF + + + VS YN++ A
Sbjct: 161 MHVKDVVTWNTMVSGLAQ-NGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDV 219
Query: 47 CHLHH-----------FGVG------------SARAFFDRMEVKDTASWNTMISGYAQVG 83
C H F G +A + F+ + KD +SW TM++ YA G
Sbjct: 220 CRCLHGLVIKKGFIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNG 279
Query: 84 LMGEASMLFAVMP----EKNCVSWSAMVSGYVACGDL-------DAAVECFYAAPVRSVI 132
E LF +M N V+ ++ + GDL D AV+ + V
Sbjct: 280 FFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQ---QGLIGDVS 336
Query: 133 TWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESG 192
T++++ Y K G +E AE+LF + + +V+W+AMIA Y + G+ ++ + LF+ M+
Sbjct: 337 VATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIH 396
Query: 193 AKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAW 252
KPNA++LTSVL GC+ ++A +LGK +H K+ + S+ T++ISMYAKCG A
Sbjct: 397 IKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPAL 456
Query: 253 ELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAG 312
+ F ++P KD V++NA+ GY Q G KA ++ M+ G+ PD T V +L C
Sbjct: 457 KAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCS 516
Query: 313 LVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTL 372
G + +++ G ++ ++++ + L A+ L F+ + +
Sbjct: 517 DYARGSCVYGQIIKH-GFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIM 575
Query: 373 LGACRIHKNLD--LAEFAAKNLLELDPSSAT 401
+ +H + +A F + + P++ T
Sbjct: 576 MNGYLLHGQAEEAVATFRQMKVEKFQPNAVT 606
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 161/331 (48%), Gaps = 11/331 (3%)
Query: 56 SARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGY----- 110
SAR FD+M VKD +WNTM+SG AQ G A +LF M ++C VS Y
Sbjct: 153 SARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDM--RSCCVDIDHVSLYNLIPA 210
Query: 111 VACGDLDAAVECFYAAPVRSVITW---TAMITGYMKFGRVESAERLFREMSLKTLVTWNA 167
V+ + C + ++ + + +I Y + +AE +F E+ K +W
Sbjct: 211 VSKLEKSDVCRCLHGLVIKKGFIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGT 270
Query: 168 MIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSP 227
M+A Y NG E+ L+LF M + N ++ S L + + L G +H +
Sbjct: 271 MMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQG 330
Query: 228 LSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFD 287
L D + TSL+SMY+KCG+L+ A +LF+ I +D+VSW+AMI+ Y Q G ++A+ LF
Sbjct: 331 LIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFR 390
Query: 288 EMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRA 347
+M +KP+ +T +VL C LG ++ I+++ E ++ + +
Sbjct: 391 DMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKA-DIESELETATAVISMYAKC 449
Query: 348 GRLPEAVDLIKSMPFKPHPAIFGTLLGACRI 378
GR A+ + +P K A G +I
Sbjct: 450 GRFSPALKAFERLPIKDAVAFNALAQGYTQI 480
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/464 (24%), Positives = 192/464 (41%), Gaps = 83/464 (17%)
Query: 57 ARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVS---WSAMVSGYVAC 113
+R FD + WN+MI GY + GL EA F M E+ + +S +
Sbjct: 52 SRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACA 111
Query: 114 GDLDAAVECFYAAPVR------------SVITWTAMITGYMKFGRVESAERLFREMSLKT 161
G +D + +R V TA++ Y K + SA ++F +M +K
Sbjct: 112 GSMD------FKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKD 165
Query: 162 LVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQ 221
+VTWN M++G +NG + L LF M + +SL +++ S L + + +H
Sbjct: 166 VVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHG 225
Query: 222 LVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEK 281
LV K ++G LI MY C DL A +F ++ RKD SW M++ YA +G E+
Sbjct: 226 LVIKKGFIFAFSSG--LIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEE 283
Query: 282 ALHLFDEMR------------------------------HD-----GMKPDWITFVAVLL 306
L LFD MR HD G+ D +++
Sbjct: 284 VLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMS 343
Query: 307 ACNHAGLVDLGVQYF-NMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSM---PF 362
+ G +++ Q F N+ RD ++ M+ +AG+ EA+ L + M
Sbjct: 344 MYSKCGELEIAEQLFINIEDRDV------VSWSAMIASYEQAGQHDEAISLFRDMMRIHI 397
Query: 363 KPHPAIFGTLLGAC------RIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRW 416
KP+ ++L C R+ K++ +A K +E + +AT + + YA R+
Sbjct: 398 KPNAVTLTSVLQGCAGVAASRLGKSIHC--YAIKADIESELETATAVISM---YAKCGRF 452
Query: 417 EHVARIRRSMKENKVVK----APGYSWIEISSEVHEFRSSDRLH 456
+ + V A GY+ I +++ + + +LH
Sbjct: 453 SPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLH 496
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 86/166 (51%), Gaps = 1/166 (0%)
Query: 137 MITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLES-GAKP 195
+I Y F R + + +F + +V WN+MI GY G + L F M E G P
Sbjct: 39 LINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDP 98
Query: 196 NALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELF 255
+ S T L C+ + G ++H L+ + L SD GT+L+ MY K DL A ++F
Sbjct: 99 DKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVF 158
Query: 256 VQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITF 301
++ KD+V+WN M+SG AQ+G AL LF +MR + D ++
Sbjct: 159 DKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSL 204
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 116/260 (44%), Gaps = 44/260 (16%)
Query: 29 LFEKIP-EPNTVSYNIMLACHLHHFGVGSARAFFDRMEVK----DTASWNTMISGYAQ-- 81
LF+K E +TVS+NIM+ +L H A A F +M+V+ + ++ ++ A+
Sbjct: 559 LFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELS 618
Query: 82 ---VGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPVRSVITWTAMI 138
VG+ +S++ + V +++V Y CG ++++ +CF + +++W M+
Sbjct: 619 ALRVGMSVHSSLIQCGFCSQTPVG-NSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTML 677
Query: 139 TGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNAL 198
+ Y +G A + LF SM E+ KP+++
Sbjct: 678 S-------------------------------AYAAHGLASCAVSLFLSMQENELKPDSV 706
Query: 199 SLTSVLLGCSNLSALQLGKQV-HQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQ 257
S SVL C + ++ GK++ ++ + + ++ ++ + K G EA E+ +
Sbjct: 707 SFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRR 766
Query: 258 IPRKDIVS-WNAMISGYAQH 276
+ K V W A+++ H
Sbjct: 767 MRVKTSVGVWGALLNSSRMH 786
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 13/166 (7%)
Query: 4 KSTVTWNSILSAFAKKHGNFEQARQLFEKIP----EPNTVSY-NIM-LACHLHHFGVGSA 57
KSTV+WN +++ + HG E+A F ++ +PN V++ NI+ A L VG +
Sbjct: 567 KSTVSWNIMMNGYL-LHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMS 625
Query: 58 --RAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGD 115
+ T N+++ YA+ G++ + F + K VSW+ M+S Y A G
Sbjct: 626 VHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGL 685
Query: 116 LDAAVECFYAAPVRSV----ITWTAMITGYMKFGRVESAERLFREM 157
AV F + + +++ ++++ G VE +R+F EM
Sbjct: 686 ASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEM 731
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 137/454 (30%), Positives = 243/454 (53%), Gaps = 14/454 (3%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIPE----PNTVSYNIMLAC--HLHHFGV 54
M ++WNS++S + + G F++ LF ++ PN S+ LA LH +
Sbjct: 116 MPDPDVISWNSLVSGYVQS-GRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPL 174
Query: 55 GS---ARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYV 111
G+ ++ +E + N +I Y + G M +A ++F M EK+ VSW+A+V+
Sbjct: 175 GACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCS 234
Query: 112 ACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAG 171
G L+ + F+ P +T+ +I ++K G +A ++ +M +WN ++ G
Sbjct: 235 RNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTG 294
Query: 172 YVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSD 231
YV + ++ + + F M SG + + SL+ VL + L+ + G +H K L S
Sbjct: 295 YVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSR 354
Query: 232 TTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRH 291
++LI MY+KCG LK A +F +PRK+++ WN MISGYA++G +A+ LF++++
Sbjct: 355 VVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQ 414
Query: 292 DG-MKPDWITFVAVLLACNHAGL-VDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGR 349
+ +KPD TF+ +L C+H + +++ + YF MM+ ++ IK EH ++ +G+ G
Sbjct: 415 ERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGE 474
Query: 350 LPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATG--YVQLA 407
+ +A +I+ F + LLGAC K+L A+ A ++EL + Y+ ++
Sbjct: 475 VWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMS 534
Query: 408 NVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIE 441
N+YA RW V +IR+ M+E+ V+K G SWI+
Sbjct: 535 NLYAYHERWREVGQIRKIMRESGVLKEVGSSWID 568
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 136/285 (47%), Gaps = 27/285 (9%)
Query: 57 ARAFFDRMEVKDTAS---WNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVS----- 108
+ AF R V TAS W+T++ A+ G +G ++ + S +V
Sbjct: 6 SNAFTTRSHVGSTASSNSWSTIVPALARFGSIGVLRAAVELINDGEKPDASPLVHLLRVS 65
Query: 109 ---GYVA-CGDLDAAVECFYAAPVRSVITWTAMITGYMKFGR----VESAERLFREMSLK 160
GYV+ C L V ++ T + M+F + +E A ++F EM
Sbjct: 66 GNYGYVSLCRQLHGYV------TKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDP 119
Query: 161 TLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVH 220
+++WN++++GYV++GR ++G+ LF + S PN S T+ L C+ L LG +H
Sbjct: 120 DVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIH 179
Query: 221 QLVCKSPLS-SDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAG 279
+ K L + G LI MY KCG + +A +F + KD VSWNA+++ +++G
Sbjct: 180 SKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKL 239
Query: 280 EKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMM 324
E L F +M + PD +T+ ++ A +G + Q + M
Sbjct: 240 ELGLWFFHQMPN----PDTVTYNELIDAFVKSGDFNNAFQVLSDM 280
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 131/279 (46%), Gaps = 34/279 (12%)
Query: 188 MLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGD 247
++ G KP+A L +L N + L +Q+H V K S+T SL+ Y
Sbjct: 46 LINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDS 105
Query: 248 LKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLA 307
L++A ++F ++P D++SWN+++SGY Q G ++ + LF E+ + P+ +F A L A
Sbjct: 106 LEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAA 165
Query: 308 CN-----------HAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDL 356
C H+ LV LG++ N++V + C++D+ G+ G + +AV +
Sbjct: 166 CARLHLSPLGACIHSKLVKLGLEKGNVVVGN-----------CLIDMYGKCGFMDDAVLV 214
Query: 357 IKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRW 416
+ M K + + ++ +C + L+L + + +P + T Y +L + + +
Sbjct: 215 FQHMEEKDTVS-WNAIVASCSRNGKLELGLWFFHQM--PNPDTVT-YNELIDAFVKSGDF 270
Query: 417 EHVARIRRSMKE------NKVVKAPGYSWIEISSEVHEF 449
+ ++ M N ++ GY E S E EF
Sbjct: 271 NNAFQVLSDMPNPNSSSWNTILT--GYVNSEKSGEATEF 307
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 144/468 (30%), Positives = 227/468 (48%), Gaps = 81/468 (17%)
Query: 5 STVTWNSILSAFAKKHGNFEQARQLFEKI-----PEPNTVSYNIMLACH----------L 49
S V+WN I+ + + N E F+ + P +TVS ++MLAC +
Sbjct: 227 SDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVS-SVMLACSRSLALEVGKVI 285
Query: 50 HHFGVG------------------------SARAFFDRMEVKDTASWNTMISGYAQVGLM 85
H V SAR FD+ KD SW + +SGYA GL
Sbjct: 286 HAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLT 345
Query: 86 GEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVE-----------------------C 122
EA LF +MPE+N VSW+AM+ GYV + D A++ C
Sbjct: 346 REARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVC 405
Query: 123 FYAAPVR----------------SVITWTAMITGYMKFGRVESAERLFREMS-LKTLVTW 165
+ V+ +VI A++ Y K G ++SA FR+MS L+ V+W
Sbjct: 406 SGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSW 465
Query: 166 NAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCK 225
NA++ G GR+E L F+ M + AKP+ +L ++L GC+N+ AL LGK +H + +
Sbjct: 466 NALLTGVARVGRSEQALSFFEGM-QVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIR 524
Query: 226 SPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHL 285
D +++ MY+KC A E+F + +D++ WN++I G ++G ++ L
Sbjct: 525 DGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFEL 584
Query: 286 FDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLG 345
F + ++G+KPD +TF+ +L AC G V+LG QYF+ M + I + EHY CM++L
Sbjct: 585 FMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYC 644
Query: 346 RAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLL 393
+ G L + + + MPF P + + AC+ ++ L +AAK L+
Sbjct: 645 KYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRLM 692
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 171/371 (46%), Gaps = 11/371 (2%)
Query: 26 ARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGY---AQV 82
AR++F++I P+ VS+N+++ +L A F +M + N +S
Sbjct: 216 ARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSR 275
Query: 83 GLMGEASMLFAVMPEKNCVSWSAMVSG-----YVACGDLDAAVECFYAAPVRSVITWTAM 137
L E + + K V +VS YV C L++A F + + +WT+
Sbjct: 276 SLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSA 335
Query: 138 ITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNA 197
++GY G A LF M + +V+WNAM+ GYV ++ L M + +
Sbjct: 336 MSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDN 395
Query: 198 LSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQ 257
++L +L CS +S +Q+GKQ H + + ++ +L+ MY KCG L+ A F Q
Sbjct: 396 VTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQ 455
Query: 258 IPR-KDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDL 316
+ +D VSWNA+++G A+ G E+AL F+ M+ + KP T +L C + ++L
Sbjct: 456 MSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNL 514
Query: 317 GVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGAC 376
G ++RD G K MVD+ + A+++ K + + G C
Sbjct: 515 GKAIHGFLIRD-GYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCC 573
Query: 377 RIHKNLDLAEF 387
R ++ ++ E
Sbjct: 574 RNGRSKEVFEL 584
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 171/397 (43%), Gaps = 47/397 (11%)
Query: 54 VGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYV-A 112
V AR F+ M +D SWN +I+ AQ G+ E +F M + +G + +
Sbjct: 112 VDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKS 171
Query: 113 CG---DLD-------AAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTL 162
CG DL A V+ Y+ +V T+++ Y K + A R+F E+ +
Sbjct: 172 CGLILDLRLLRQLHCAVVKYGYSG---NVDLETSIVDVYGKCRVMSDARRVFDEIVNPSD 228
Query: 163 VTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQL 222
V+WN ++ Y+E G ++ + +F MLE +P +++SV+L CS AL++GK +H +
Sbjct: 229 VSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAI 288
Query: 223 VCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKA 282
K + +DT TS+ MY KC L+ A +F Q KD+ SW + +SGYA G +A
Sbjct: 289 AVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREA 348
Query: 283 LHLFD-------------------------------EMRHDGMKPDWITFVAVLLACNHA 311
LFD MR + D +T V +L C+
Sbjct: 349 RELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGI 408
Query: 312 GLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMP-FKPHPAIFG 370
V +G Q + R G T ++D+ G+ G L A + M + +
Sbjct: 409 SDVQMGKQAHGFIYRH-GYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNA 467
Query: 371 TLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLA 407
L G R+ ++ F +E PS T LA
Sbjct: 468 LLTGVARVGRSEQALSFFEGMQVEAKPSKYTLATLLA 504
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 99/192 (51%)
Query: 126 APVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLF 185
+P+ + I Y K G V+ A LF EM + +WNA+I +NG +++ ++F
Sbjct: 91 SPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMF 150
Query: 186 KSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKC 245
+ M G + S VL C + L+L +Q+H V K S + TS++ +Y KC
Sbjct: 151 RRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKC 210
Query: 246 GDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVL 305
+ +A +F +I VSWN ++ Y + G ++A+ +F +M ++P T +V+
Sbjct: 211 RVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVM 270
Query: 306 LACNHAGLVDLG 317
LAC+ + +++G
Sbjct: 271 LACSRSLALEVG 282
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 220 bits (560), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 128/399 (32%), Positives = 200/399 (50%), Gaps = 26/399 (6%)
Query: 176 GRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAG 235
G+ + +++ KS G + L + C + ALQ K VH+ + S SD +A
Sbjct: 160 GKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAY 219
Query: 236 TSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMK 295
S+I MY+ CG +++A +F +P +++ +W +I +A++G GE A+ F + +G K
Sbjct: 220 NSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNK 279
Query: 296 PDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVD 355
PD F + AC G ++ G+ +F M +++GI EHY +V +L G L EA+
Sbjct: 280 PDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALR 339
Query: 356 LIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPS-----SATGYVQLANVY 410
++SM +P+ ++ TL+ R+H +L L + + +LD S S G V + +
Sbjct: 340 FVESM--EPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDASRLNKESKAGLVPVKSSD 397
Query: 411 AAQNRWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIHXXXXXXX 470
+ + + +A K P Y + + D PE ++
Sbjct: 398 LVKEKLQRMA------------KGPNYG-------IRYMAAGDISRPENRELYMALKSLK 438
Query: 471 XXXXXAGYVPDLEFALHDVGEELKEQLLLWHSEKLAIAYGLLKVPLGLPIRVFKNLRVCG 530
GYVP + ALHDV +E K++ L H+E+ A L P IRV KNLRVC
Sbjct: 439 EHMIEIGYVPLSKLALHDVDQESKDENLFNHNERFAFISTFLDTPARSLIRVMKNLRVCA 498
Query: 531 DCHTAIKYISAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
DCH A+K +S I GRE+I RD RFHH KDG CSC +YW
Sbjct: 499 DCHNALKLMSKIVGRELISRDAKRFHHMKDGVCSCREYW 537
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 71/180 (39%), Gaps = 23/180 (12%)
Query: 113 CGDLDAAVEC-----FYAAPV--RSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTW 165
CGD A E F + V + + ++I Y G VE A +F M + L TW
Sbjct: 191 CGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETW 250
Query: 166 NAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLG--------K 217
+I + +NG+ ED + F + G KP+ + C L + G K
Sbjct: 251 CGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYK 310
Query: 218 QVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHG 277
+ + C SL+ M A+ G L EA FV+ ++ W +++ HG
Sbjct: 311 EYGIIPCMEHY-------VSLVKMLAEPGYLDEALR-FVESMEPNVDLWETLMNLSRVHG 362
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 124/377 (32%), Positives = 206/377 (54%), Gaps = 48/377 (12%)
Query: 9 WNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKD 68
WN ++S + K GN E+A +LF+ +PE + VS+ +M+ + +AR +FDRM K
Sbjct: 170 WNVMISGYWK-WGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKS 228
Query: 69 TASWNTMISGYAQVGLMGEASMLF------AVMPEK------------------------ 98
SWN M+SGYAQ G +A LF V P +
Sbjct: 229 VVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVK 288
Query: 99 ---------NCVSWSAMVSGYVACGDLDAAVECFYA-APVRSVITWTAMITGYMKFGRVE 148
NC +A++ + C D+ +A F R+++TW AMI+GY + G +
Sbjct: 289 LIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMS 348
Query: 149 SAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESG-AKPNALSLTSVLLGC 207
SA +LF M + +V+WN++IAGY NG+A ++ F+ M++ G +KP+ +++ SVL C
Sbjct: 349 SARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSAC 408
Query: 208 SNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWN 267
+++ L+LG + + K+ + + + SLI MYA+ G+L EA +F ++ +D+VS+N
Sbjct: 409 GHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYN 468
Query: 268 AMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRD 327
+ + +A +G G + L+L +M+ +G++PD +T+ +VL ACN AGL+ G + F +
Sbjct: 469 TLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRNP 528
Query: 328 FGIKTKPEHYACMVDLL 344
+HYACM DLL
Sbjct: 529 LA-----DHYACM-DLL 539
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 164/330 (49%), Gaps = 40/330 (12%)
Query: 67 KDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYAA 126
KD N ++ Y + + A +F + ++ W+ M+SGY G+ + A + F
Sbjct: 134 KDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMM 193
Query: 127 PVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFK 186
P V++WT MITG+ K +E+A + F M K++V+WNAM++GY +NG ED L+LF
Sbjct: 194 PENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFN 253
Query: 187 SMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKC- 245
ML G +PN + V+ CS + L + + +L+ + + + T+L+ M+AKC
Sbjct: 254 DMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCR 313
Query: 246 -------------------------------GDLKEAWELFVQIPRKDIVSWNAMISGYA 274
GD+ A +LF +P++++VSWN++I+GYA
Sbjct: 314 DIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYA 373
Query: 275 QHGAGEKALHLFDEMRHDG-MKPDWITFVAVLLACNHAGLVDLG---VQYFNMMVRDFGI 330
+G A+ F++M G KPD +T ++VL AC H ++LG V Y +R I
Sbjct: 374 HNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDY----IRKNQI 429
Query: 331 KTKPEHYACMVDLLGRAGRLPEAVDLIKSM 360
K Y ++ + R G L EA + M
Sbjct: 430 KLNDSGYRSLIFMYARGGNLWEAKRVFDEM 459
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 100/245 (40%), Gaps = 25/245 (10%)
Query: 153 LFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSA 212
+F ++ + N+M + + A D L+L++ G P+A S V+ SA
Sbjct: 62 IFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIK-----SA 116
Query: 213 LQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISG 272
+ G LV K D ++ MY K ++ A ++F QI ++ WN MISG
Sbjct: 117 GRFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISG 176
Query: 273 YAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKT 332
Y + G E+A LFD M + D +++ ++ ++ +YF+ M
Sbjct: 177 YWKWGNKEEACKLFDMMPEN----DVVSWTVMITGFAKVKDLENARKYFDRM-------- 224
Query: 333 KPEH----YACMVDLLGRAGRLPEAVDLIKSM---PFKPHPAIFGTLLGACRIHKNLDLA 385
PE + M+ + G +A+ L M +P+ + ++ AC + L
Sbjct: 225 -PEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLT 283
Query: 386 EFAAK 390
K
Sbjct: 284 RSLVK 288
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 118/340 (34%), Positives = 191/340 (56%), Gaps = 5/340 (1%)
Query: 104 SAMVSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLV 163
++ V Y GDL+++ + F V+ +++ + G ++ A F+ M + +V
Sbjct: 125 TSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVV 184
Query: 164 TWNAMIAGYVENGRAEDGLKLFKSMLESG---AKPNALSLTSVLLGCSNLS--ALQLGKQ 218
+W +I G+ + G L +F M+++ PN + SVL C+N ++LGKQ
Sbjct: 185 SWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQ 244
Query: 219 VHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGA 278
+H V + TT GT+L+ MY K GDL+ A +F QI K + +WNA+IS A +G
Sbjct: 245 IHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGR 304
Query: 279 GEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYA 338
++AL +F+ M+ + P+ IT +A+L AC + LVDLG+Q F+ + ++ I EHY
Sbjct: 305 PKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYG 364
Query: 339 CMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPS 398
C+VDL+GRAG L +A + I+S+PF+P ++ G LLGAC+IH+N +L K L+ L P
Sbjct: 365 CVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNTVGKQLIGLQPQ 424
Query: 399 SATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYS 438
YV L+ A + W ++R++M E + K P YS
Sbjct: 425 HCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 109/222 (49%), Gaps = 13/222 (5%)
Query: 16 FAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTM 75
F + G+ E +R++F+ I P V+ N +L + + A +F RM V D SW T+
Sbjct: 130 FYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTV 189
Query: 76 ISGYAQVGLMGEASMLFAVMPEKN----CVSWSAMVSGYVACGDLDAA-------VECFY 124
I+G+++ GL +A M+F M + + + VS +C + D + +
Sbjct: 190 INGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYV 249
Query: 125 AAP--VRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGL 182
+ + + TA++ Y K G +E A +F ++ K + WNA+I+ NGR + L
Sbjct: 250 MSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQAL 309
Query: 183 KLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVC 224
++F+ M S PN ++L ++L C+ + LG Q+ +C
Sbjct: 310 EMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSIC 351
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 139/434 (32%), Positives = 225/434 (51%), Gaps = 24/434 (5%)
Query: 24 EQARQ----LFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGY 79
E RQ + ++ E T+S ++ + + + + F+ +E KD SWN ++SG+
Sbjct: 101 ETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGF 160
Query: 80 AQVGLMGEASMLFAVM-PEKNCVSWSAMVSGYVACGDLD-----AAVECFYAAPVRS-VI 132
+ G EA +FA M E+ +S + S C L V R V+
Sbjct: 161 LRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDLVV 220
Query: 133 TWTAMITGYMKFGRVESAERLFREMSLKT-LVTWNAMIAGYVENGRAEDGLKLFKSMLES 191
TAMI+ Y G + A +++ +++ T V N++I+G + N ++ +L S
Sbjct: 221 LGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAF-----LLMS 275
Query: 192 GAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEA 251
+PN L+S L GCS+ S L +GKQ+H + ++ SD+ L+ MY KCG + +A
Sbjct: 276 RQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQA 335
Query: 252 WELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHD--GMKPDWITFVAVLLACN 309
+F IP K +VSW +MI YA +G G KAL +F EM + G+ P+ +TF+ V+ AC
Sbjct: 336 RTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACA 395
Query: 310 HAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHP--- 366
HAGLV G + F MM + + EHY C +D+L +AG E L++ M +
Sbjct: 396 HAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIP 455
Query: 367 -AIFGTLLGACRIHKNLDLAEFAAKNLL-ELDPSSATGYVQLANVYAAQNRWEHVARIRR 424
AI+ +L AC ++ +L E+ A+ L+ E P +A+ YV ++N YAA +W+ V +R
Sbjct: 456 CAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRG 515
Query: 425 SMKENKVVKAPGYS 438
+K +VK G+S
Sbjct: 516 KLKNKGLVKTAGHS 529
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 120/235 (51%), Gaps = 8/235 (3%)
Query: 150 AERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSN 209
A+ LF E+ + L + N+ ++ ++ +G D L LF + + ++ + T VL CS
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSL 96
Query: 210 LSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAM 269
LS + G+QVH L+ K + T + T+LI MY+K G L ++ +F + KD+VSWNA+
Sbjct: 97 LSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNAL 156
Query: 270 ISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMV---R 326
+SG+ ++G G++AL +F M + ++ T +V+ C ++ G Q M+V R
Sbjct: 157 LSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGR 216
Query: 327 DFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKN 381
D + M+ G + EA+ + S+ + +L+ C ++N
Sbjct: 217 DLVVLGTA-----MISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRN 266
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 167/344 (48%), Gaps = 18/344 (5%)
Query: 30 FEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEAS 89
F ++ S N++L C A FD + +D +S N+ +S + + G +
Sbjct: 10 FIRLGNVTVKSTNLVLRCVFIRNFATHADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTL 69
Query: 90 MLFAVM----PEKNCVSWSAMVSG-----YVACGDLDAAVECFYAAPVRSVITWTAMITG 140
LF + P+ + +++ ++ Y G A+ A I+ TA+I
Sbjct: 70 ALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAET-GTISKTALIDM 128
Query: 141 YMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSL 200
Y K+G + + R+F + K LV+WNA+++G++ NG+ ++ L +F +M + + +L
Sbjct: 129 YSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTL 188
Query: 201 TSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIP- 259
+SV+ C++L LQ GKQVH +V + GT++IS Y+ G + EA +++ +
Sbjct: 189 SSVVKTCASLKILQQGKQVHAMVVVTG-RDLVVLGTAMISFYSSVGLINEAMKVYNSLNV 247
Query: 260 RKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQ 319
D V N++ISG ++ ++A L R P+ + L C+ + +G Q
Sbjct: 248 HTDEVMLNSLISGCIRNRNYKEAFLLMSRQR-----PNVRVLSSSLAGCSDNSDLWIGKQ 302
Query: 320 YFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFK 363
+ +R+ G + + ++D+ G+ G++ +A + +++P K
Sbjct: 303 IHCVALRN-GFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSK 345
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 212 bits (539), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 119/327 (36%), Positives = 176/327 (53%), Gaps = 16/327 (4%)
Query: 130 SVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVE-----NGRAEDGLKL 184
S + T ++ Y K G + A ++F EM +T VTWNAMI GY N A + L
Sbjct: 146 SELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVL 205
Query: 185 FK--SMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSS--DTTAGTSLIS 240
F+ S SG +P ++ VL S L++G VH + K + D GT+L+
Sbjct: 206 FRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVD 265
Query: 241 MYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWIT 300
MY+KCG L A+ +F + K++ +W +M +G A +G G + +L + M G+KP+ IT
Sbjct: 266 MYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEIT 325
Query: 301 FVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSM 360
F ++L A H GLV+ G++ F M FG+ EHY C+VDLLG+AGR+ EA I +M
Sbjct: 326 FTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAM 385
Query: 361 PFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLE-------LDPSSATGYVQLANVYAAQ 413
P KP + +L AC I+ + E K LLE L S YV L+NV A +
Sbjct: 386 PIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHK 445
Query: 414 NRWEHVARIRRSMKENKVVKAPGYSWI 440
+W V ++R+ MKE ++ PGYS++
Sbjct: 446 GKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 126/280 (45%), Gaps = 34/280 (12%)
Query: 11 SILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGS-----ARAFFDRME 65
+ L F K+G+ AR++F+++PE +V++N M+ + H G+ A F R
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFS 210
Query: 66 -----VKDT-ASWNTMISGYAQVGLMGEASML------FAVMPEKNCVSWSAMVSGYVAC 113
V+ T + ++S +Q GL+ S++ PE + +A+V Y C
Sbjct: 211 CCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKC 270
Query: 114 GDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTL----VTWNAMI 169
G L+ A F V++V TWT+M TG GR L M+ + +T+ +++
Sbjct: 271 GCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLL 330
Query: 170 AGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVL--LGC--SNLSALQLGKQVHQLVCK 225
+ Y G E+G++LFKSM +T V+ GC L ++ +Q +
Sbjct: 331 SAYRHIGLVEEGIELFKSM------KTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILA 384
Query: 226 SPLSSDTTAGTSL---ISMYAKCGDLKEAWELFVQIPRKD 262
P+ D SL S+Y + +E + ++I R+D
Sbjct: 385 MPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIERED 424
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 102/309 (33%), Positives = 174/309 (56%), Gaps = 1/309 (0%)
Query: 132 ITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLES 191
I + ++ + G ++ A +LF + K ++ ++ +I G V++G LF+ +++
Sbjct: 378 IVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKL 437
Query: 192 GAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEA 251
G + ++++L CS+L++L GKQ+H L K S+ T+L+ MY KCG++
Sbjct: 438 GLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNG 497
Query: 252 WELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHA 311
LF + +D+VSW +I G+ Q+G E+A F +M + G++P+ +TF+ +L AC H+
Sbjct: 498 VVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHS 557
Query: 312 GLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGT 371
GL++ M ++G++ EHY C+VDLLG+AG EA +LI MP +P I+ +
Sbjct: 558 GLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTS 617
Query: 372 LLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKV 431
LL AC HKN L A+ LL+ P + Y L+N YA W+ ++++R + K+
Sbjct: 618 LLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREAAKKLG- 676
Query: 432 VKAPGYSWI 440
K G SWI
Sbjct: 677 AKESGMSWI 685
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 185/399 (46%), Gaps = 46/399 (11%)
Query: 21 GNFEQARQLFEKIPEPN----TVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMI 76
G+ + ++E+I + N V N ++ ++ + + A + F + + SWNT+I
Sbjct: 121 GDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLI 180
Query: 77 SGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGD----------------LDA-A 119
SGY + GLM EA LF MP+ N VSW+ ++SG+V G LD A
Sbjct: 181 SGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFA 240
Query: 120 VEC----------------FYAAPVRSVI-----TWTAMITGYMKFGRVESAERLFREMS 158
+ C + V+S + +A+I Y G + A +F +
Sbjct: 241 LPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEK 300
Query: 159 L---KTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQL 215
L ++ WN+M++G++ N E L L + +S ++ +L+ L C N L+L
Sbjct: 301 LAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRL 360
Query: 216 GKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQ 275
G QVH LV S D G+ L+ ++A G++++A +LF ++P KDI++++ +I G +
Sbjct: 361 GLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVK 420
Query: 276 HGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPE 335
G A +LF E+ G+ D +L C+ + G Q + ++ G +++P
Sbjct: 421 SGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKK-GYESEPV 479
Query: 336 HYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLG 374
+VD+ + G + V L M + + G ++G
Sbjct: 480 TATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVG 518
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 182/442 (41%), Gaps = 60/442 (13%)
Query: 17 AKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTASWNTMI 76
A K G QA + + I + N N +++ ++ + A FD M ++ +W TM+
Sbjct: 20 AFKRGESIQAHVIKQGISQ-NVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMV 78
Query: 77 SGYAQVGLMGEASMLFAVMPE---------------KNC--------------------- 100
SGY G +A L+ M + K C
Sbjct: 79 SGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENL 138
Query: 101 ----VSWSAMVSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFRE 156
V +++V YV G L A F S +W +I+GY K G ++ A LF
Sbjct: 139 RGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHR 198
Query: 157 MSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLG 216
M +V+WN +I+G+V+ G L+ M G + +L L CS L +G
Sbjct: 199 MPQPNVVSWNCLISGFVDKGSPR-ALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMG 257
Query: 217 KQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQ---IPRKDIVSWNAMISGY 273
KQ+H V KS L S A ++LI MY+ CG L A ++F Q + WN+M+SG+
Sbjct: 258 KQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGF 317
Query: 274 AQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTK 333
+ E AL L ++ + D T L C + + LG+Q +++V G +
Sbjct: 318 LINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVS-GYELD 376
Query: 334 PEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACR--------------IH 379
+ +VDL G + +A L +P K A G + G + I
Sbjct: 377 YIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIK 436
Query: 380 KNLDLAEFAAKNLLELDPSSAT 401
LD +F N+L++ S A+
Sbjct: 437 LGLDADQFIVSNILKVCSSLAS 458
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 4/173 (2%)
Query: 207 CSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSW 266
C + A + G+ + V K +S + ++ISMY L +A ++F ++ ++IV+W
Sbjct: 15 CGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTW 74
Query: 267 NAMISGYAQHGAGEKALHLFDEM-RHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMV 325
M+SGY G KA+ L+ M + + + AVL AC G + LG+ + +
Sbjct: 75 TTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIG 134
Query: 326 RDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLL-GACR 377
++ ++ +VD+ + GRL EA K + +P + TL+ G C+
Sbjct: 135 KE-NLRGDVVLMNSVVDMYVKNGRLIEANSSFKEI-LRPSSTSWNTLISGYCK 185
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 119/256 (46%), Gaps = 23/256 (8%)
Query: 11 SILSAFAKKHGNFEQARQLFEKIPEPNTVSYN-IMLACHLHHFGVGSARAFFDRMEV--- 66
SIL GN + A +LF ++P + ++++ ++ C F + F + +++
Sbjct: 381 SILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLD 440
Query: 67 KDTASWNTMISGYAQVGLMGEASMLFAVMPEKNC----VSWSAMVSGYVACGDLDAAVEC 122
D + ++ + + +G + + +K V+ +A+V YV CG++D V
Sbjct: 441 ADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVL 500
Query: 123 FYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTL----VTWNAMIAGYVENGRA 178
F R V++WT +I G+ + GRVE A R F +M + VT+ +++ +G
Sbjct: 501 FDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLL 560
Query: 179 EDGLKLFKSML-ESGAKPNALSLTSV--LLGCSNLSALQLGKQVHQLVCKSPLSSDTTAG 235
E+ ++M E G +P V LLG + L ++ ++L+ K PL D T
Sbjct: 561 EEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLF-----QEANELINKMPLEPDKTIW 615
Query: 236 TSLISMYAKCGDLKEA 251
TSL++ CG K A
Sbjct: 616 TSLLT---ACGTHKNA 628
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 202 bits (513), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 126/396 (31%), Positives = 204/396 (51%), Gaps = 45/396 (11%)
Query: 14 SAFAKKHGNFEQARQLFEKIPEPNTVSYNIM---LACHLHHFG-VGSARAFFDRMEVKDT 69
S F + NF Q +Q+ KI + N + ++ L FG A F++++ T
Sbjct: 24 SYFLRTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPST 83
Query: 70 ASWNTMISGYAQVGLMGEASMLFAVM---------------PEKNCVSWSAMVSG----- 109
+WN MI + EA +LF +M K C++ S++ G
Sbjct: 84 FTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHG 143
Query: 110 --------------------YVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVES 149
Y CG D+ + F P RS+++WT M+ G + +++S
Sbjct: 144 LAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDS 203
Query: 150 AERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSN 209
AE +F +M ++ +V+W AMI YV+N R ++ +LF+ M KPN ++ ++L +
Sbjct: 204 AEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQ 263
Query: 210 LSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAM 269
L +L +G+ VH K+ D GT+LI MY+KCG L++A ++F + K + +WN+M
Sbjct: 264 LGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSM 323
Query: 270 ISGYAQHGAGEKALHLFDEMRHDG-MKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDF 328
I+ HG GE+AL LF+EM + ++PD ITFV VL AC + G V G++YF M++ +
Sbjct: 324 ITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVY 383
Query: 329 GIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKP 364
GI EH ACM+ LL +A + +A +L++SM P
Sbjct: 384 GISPIREHNACMIQLLEQALEVEKASNLVESMDSDP 419
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 96/230 (41%), Gaps = 11/230 (4%)
Query: 204 LLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDI 263
L CSN S L KQ+H + K L++D LIS+ + G+ + A +F Q+
Sbjct: 27 LRTCSNFSQL---KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPST 83
Query: 264 VSWNAMISGYAQHGAGEKALHLFDEM--RHDGMKPDWITFVAVLLACNHAGLVDLGVQYF 321
+WN MI + + +AL LF M H + D TF V+ AC + + LG Q
Sbjct: 84 FTWNLMIRSLSVNHKPREALLLFILMMISHQS-QFDKFTFPFVIKACLASSSIRLGTQVH 142
Query: 322 NMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKN 381
+ ++ G ++DL + G+ + MP + + + T+L +
Sbjct: 143 GLAIKA-GFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVS-WTTMLYGLVSNSQ 200
Query: 382 LDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKV 431
LD AE ++ + + + Y R + ++ R M+ + V
Sbjct: 201 LDSAEIVFN---QMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDV 247
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 113/378 (29%), Positives = 191/378 (50%), Gaps = 6/378 (1%)
Query: 4 KSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDR 63
++ + + L F K GN E +R F+ I + N V +N +L+ + + G F
Sbjct: 348 ETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPICLSLFLQM 407
Query: 64 MEV---KDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDL-DAA 119
+++ +++T + L S++ + E N S+++ Y + DA
Sbjct: 408 LQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDAL 467
Query: 120 VECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAE 179
+ +A+ SV+ + Y + G+ + +L + V+WN IA + E
Sbjct: 468 LLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHE 527
Query: 180 DGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLS-SDTTAGTSL 238
+ ++LFK ML+S +P+ + S+L CS L L LG +H L+ K+ S +DT L
Sbjct: 528 EVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVL 587
Query: 239 ISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDW 298
I MY KCG ++ ++F + K++++W A+IS HG G++AL F E G KPD
Sbjct: 588 IDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDR 647
Query: 299 ITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIK 358
++F+++L AC H G+V G+ F M +D+G++ + +HY C VDLL R G L EA LI+
Sbjct: 648 VSFISILTACRHGGMVKEGMGLFQKM-KDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIR 706
Query: 359 SMPFKPHPAIFGTLLGAC 376
MPF ++ T L C
Sbjct: 707 EMPFPADAPVWRTFLDGC 724
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 147/307 (47%), Gaps = 8/307 (2%)
Query: 54 VGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVAC 113
V A FD+M ++ S+NT+I GY++ G + +A +F+ M + + VSG ++C
Sbjct: 65 VSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSC 124
Query: 114 GDLDA-------AVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWN 166
LD + Y + T ++ Y + +E AE++F +M K+L TWN
Sbjct: 125 ASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWN 184
Query: 167 AMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKS 226
M++ G ++ + F+ ++ GA S VL G S + L + KQ+H K
Sbjct: 185 HMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKK 244
Query: 227 PLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLF 286
L + + SLIS Y KCG+ A +F DIVSWNA+I A+ KAL LF
Sbjct: 245 GLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLF 304
Query: 287 DEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGR 346
M G P+ T+V+VL + L+ G Q M++++ G +T ++D +
Sbjct: 305 VSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKN-GCETGIVLGNALIDFYAK 363
Query: 347 AGRLPEA 353
G L ++
Sbjct: 364 CGNLEDS 370
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 164/357 (45%), Gaps = 54/357 (15%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIPE----PNTVSYNIMLAC--------- 47
M ++ V++N+I+ ++K +G+ ++A +F ++ PN + + +L+C
Sbjct: 75 MPERNKVSFNTIIKGYSK-YGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLDVRAGT 133
Query: 48 HLH----HFGVGSARAF---------------------FDRMEVKDTASWNTMISGYAQV 82
LH +G+ A AF F+ M K +WN M+S
Sbjct: 134 QLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHR 193
Query: 83 GLMGEASMLF-------AVMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPVRS----V 131
G + E F A + E S+ ++ G DLD + + +A + +
Sbjct: 194 GFLKECMFFFRELVRMGASLTES---SFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEI 250
Query: 132 ITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLES 191
++I+ Y K G AER+F++ +V+WNA+I ++ LKLF SM E
Sbjct: 251 SVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEH 310
Query: 192 GAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEA 251
G PN + SVL S + L G+Q+H ++ K+ + G +LI YAKCG+L+++
Sbjct: 311 GFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDS 370
Query: 252 WELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLAC 308
F I K+IV WNA++SGYA G L LF +M G +P TF L +C
Sbjct: 371 RLCFDYIRDKNIVCWNALLSGYANKD-GPICLSLFLQMLQMGFRPTEYTFSTALKSC 426
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 94/193 (48%), Gaps = 3/193 (1%)
Query: 128 VRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKS 187
++ V +I+ Y K G V A ++F +M + V++N +I GY + G + +F
Sbjct: 46 LQPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSE 105
Query: 188 MLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPL-SSDTTAGTSLISMYAKCG 246
M G PN S S LL C++L ++ G Q+H L K L +D GT L+ +Y +
Sbjct: 106 MRYFGYLPNQ-STVSGLLSCASLD-VRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLD 163
Query: 247 DLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLL 306
L+ A ++F +P K + +WN M+S G ++ + F E+ G +F+ VL
Sbjct: 164 LLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLK 223
Query: 307 ACNHAGLVDLGVQ 319
+ +D+ Q
Sbjct: 224 GVSCVKDLDISKQ 236
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 73/129 (56%), Gaps = 4/129 (3%)
Query: 236 TSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMK 295
++IS+Y K G++ A ++F Q+P ++ VS+N +I GY+++G +KA +F EMR+ G
Sbjct: 53 NNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYL 112
Query: 296 PDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYA-CMVDLLGRAGRLPEAV 354
P+ T V+ LL+C V G Q + ++ +G+ C++ L GR L A
Sbjct: 113 PNQST-VSGLLSCASLD-VRAGTQLHGLSLK-YGLFMADAFVGTCLLCLYGRLDLLEMAE 169
Query: 355 DLIKSMPFK 363
+ + MPFK
Sbjct: 170 QVFEDMPFK 178
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/432 (28%), Positives = 206/432 (47%), Gaps = 23/432 (5%)
Query: 140 GYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALS 199
+++ RV S ++ T+ T++A+ + + + L++ + + G +
Sbjct: 59 SFVQCRRVSSYAQMVNNHQSVTIETFDAL----CKQVKIREALEVIDILEDKGYIVDFPR 114
Query: 200 LTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIP 259
L + C + AL+ + VH C +PL D + ++I MY+ C +A +F ++P
Sbjct: 115 LLGLAKLCGEVEALEEARVVHD--CITPL--DARSYHTVIEMYSGCRSTDDALNVFNEMP 170
Query: 260 RKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQ 319
+++ +W MI A++G GE+A+ +F +G KPD F AV AC G ++ G+
Sbjct: 171 KRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLL 230
Query: 320 YFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIH 379
+F M RD+G+ E Y ++++L G L EA+D ++ M +P ++ TL+ C +
Sbjct: 231 HFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQ 290
Query: 380 KNLDLAEFAAKNLLELDPS--SATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGY 437
L+L + A+ + +LD S S L A+ + E + +R + P
Sbjct: 291 GYLELGDRFAELIKKLDASRMSKESNAGLVAAKASDSAMEKLKELRYC---QMIRDDP-- 345
Query: 438 SWIEISSEVHEFRSSDRLHPELASIHXXXXXXXXXXXXAGYVPDLEFALHDVGEELKEQL 497
+HEFR+ D H S G+VP V EE KE+
Sbjct: 346 -----KKRMHEFRAGDTSHLGTVS---AFRSLKVQMLDIGFVPATRVCFVTVEEEEKEEQ 397
Query: 498 LLWHSEKLAIAYGLLKVPLGLPIRVFKNLRVCGDCHTAIKYISAIEGREIIVRDTTRFHH 557
LL+ S KLA A+ ++ P+ V +N+R C D H K IS I GR +I RD ++H
Sbjct: 398 LLFRSNKLAFAHAIINSEARRPLTVLQNMRTCIDGHNTFKMISLITGRALIQRDKKKYHF 457
Query: 558 FKDGFCSCSDYW 569
+K+G CSC DYW
Sbjct: 458 YKNGVCSCKDYW 469
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 69/178 (38%), Gaps = 16/178 (8%)
Query: 113 CGDLDAAVE------CFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWN 166
CG+++A E C RS T M +G + A +F EM + TW
Sbjct: 122 CGEVEALEEARVVHDCITPLDARSYHTVIEMYSGCRS---TDDALNVFNEMPKRNSETWG 178
Query: 167 AMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLG-KQVHQLVCK 225
MI +NG E + +F +E G KP+ +V C ++ + G +
Sbjct: 179 TMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYRD 238
Query: 226 SPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVS-WNAM-----ISGYAQHG 277
+ ++I M A CG L EA + ++ + V W + + GY + G
Sbjct: 239 YGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLELG 296
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 168 bits (426), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 98/321 (30%), Positives = 157/321 (48%), Gaps = 39/321 (12%)
Query: 75 MISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECF-------YAAP 127
+I Y + G M +F ++N +SW+A++SGY A G D A+ +
Sbjct: 358 LIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPD 417
Query: 128 VRSVITW--------------------------------TAMITGYMKFGRVESAERLFR 155
V ++ T T+++ Y K G E RLF
Sbjct: 418 VVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFD 477
Query: 156 EMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQL 215
+ + + W AMI YVEN G+++F+ ML S +P+++++ VL CS+L AL+L
Sbjct: 478 RLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKL 537
Query: 216 GKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQ 275
GK++H + K S +I MY KCGDL+ A F + K ++W A+I Y
Sbjct: 538 GKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGC 597
Query: 276 HGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPE 335
+ A++ F++M G P+ TF AVL C+ AG VD ++FN+M+R + ++ E
Sbjct: 598 NELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEE 657
Query: 336 HYACMVDLLGRAGRLPEAVDL 356
HY+ +++LL R GR+ EA L
Sbjct: 658 HYSLVIELLNRCGRVEEAQRL 678
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 139/290 (47%), Gaps = 19/290 (6%)
Query: 37 NTVSYNIMLACHLHHF-----GVGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASML 91
N + N L L H V A+ FD + SWN ++ G G +L
Sbjct: 140 NGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVL 199
Query: 92 --FAVMPEK----NCVSWSAMVSGYVACGDLDAAVECFYAAPVR-----SVITWTAMITG 140
F M E N S S + + L ++ +A ++ SV T+++
Sbjct: 200 STFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKT-HALAIKNGLFNSVFLKTSLVDM 258
Query: 141 YMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSML-ESGAKPNALS 199
Y K G+V A R+F E+ + +V W AMIAG N R + L LF++M+ E PN++
Sbjct: 259 YFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVI 318
Query: 200 LTSVLLGCSNLSALQLGKQVHQLVCKSP-LSSDTTAGTSLISMYAKCGDLKEAWELFVQI 258
LT++L ++ AL+LGK+VH V KS + LI +Y KCGD+ +F
Sbjct: 319 LTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGS 378
Query: 259 PRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLAC 308
+++ +SW A++SGYA +G ++AL M+ +G +PD +T VL C
Sbjct: 379 KQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVC 428
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 146/311 (46%), Gaps = 13/311 (4%)
Query: 54 VGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVM-------PEKNCVSWSAM 106
VG AR FD + +D W MI+G A EA LF M P ++
Sbjct: 265 VGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILP 324
Query: 107 VSGYVACGDLDAAVECFYAAP---VRSVITWTAMITGYMKFGRVESAERLFREMSLKTLV 163
V G V L V V + +I Y K G + S R+F + +
Sbjct: 325 VLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAI 384
Query: 164 TWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLV 223
+W A+++GY NGR + L+ M + G +P+ +++ +VL C+ L A++ GK++H
Sbjct: 385 SWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYA 444
Query: 224 CKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKAL 283
K+ + + TSL+ MY+KCG + LF ++ ++++ +W AMI Y ++ +
Sbjct: 445 LKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGI 504
Query: 284 HLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQ-YFNMMVRDFGIKTKPEHYACMVD 342
+F M +PD +T VL C+ + LG + + +++ ++F ++ P A ++
Sbjct: 505 EVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEF--ESIPFVSARIIK 562
Query: 343 LLGRAGRLPEA 353
+ G+ G L A
Sbjct: 563 MYGKCGDLRSA 573
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 109/217 (50%), Gaps = 3/217 (1%)
Query: 135 TAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENG--RAEDGLKLFKSMLESG 192
T ++ Y G V+ A+++F E + + +WNA++ G V +G R +D L F M E G
Sbjct: 150 TKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELG 209
Query: 193 AKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAW 252
N SL++V + SAL+ G + H L K+ L + TSL+ MY KCG + A
Sbjct: 210 VDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLAR 269
Query: 253 ELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEM-RHDGMKPDWITFVAVLLACNHA 311
+F +I +DIV W AMI+G A + +AL LF M + + P+ + +L
Sbjct: 270 RVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDV 329
Query: 312 GLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAG 348
+ LG + +++ +P ++ ++DL + G
Sbjct: 330 KALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCG 366
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 84/184 (45%), Gaps = 3/184 (1%)
Query: 169 IAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPL 228
I + E L + + + G NA + +++L C +L GKQVH + + L
Sbjct: 83 IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGL 142
Query: 229 SSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAG--EKALHLF 286
S+ T L+ MY CG +K+A ++F + ++ SWNA++ G G + L F
Sbjct: 143 ESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTF 202
Query: 287 DEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGR 346
EMR G+ + + V + A + G++ + +++ G+ +VD+ +
Sbjct: 203 TEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKN-GLFNSVFLKTSLVDMYFK 261
Query: 347 AGRL 350
G++
Sbjct: 262 CGKV 265
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 184/395 (46%), Gaps = 16/395 (4%)
Query: 175 NGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTA 234
G + +++ + G + + L + C AL+ + VH+ + D A
Sbjct: 97 QGNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGA 156
Query: 235 GTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGM 294
++I MY+ C + +A ++F ++P + + M+ + +G GE+A+ LF + +G
Sbjct: 157 RNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGN 216
Query: 295 KPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAV 354
KP+ F V C G V G F M R++GI EHY + +L +G L EA+
Sbjct: 217 KPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEAL 276
Query: 355 DLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQN 414
+ ++ MP +P ++ TL+ R+H +++L + A+ + +LD ++ V A + A
Sbjct: 277 NFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLD-ATRLDKVSSAGLVA--- 332
Query: 415 RWEHVARIRRSMKENKVVKAPGYSWIEISSEVHEFRSSDRLHPELASIHXXXXXXXXXXX 474
+ +K+ ++ Y + FR D HP++ I+
Sbjct: 333 -----TKASDFVKKEPSTRSEPYFY-------STFRPVDSSHPQMNIIYETLMSLRSQLK 380
Query: 475 XAGYVPDLEFALHDVGEELKEQLLLWHSEKLAIAYGLLKVPLGLPIRVFKNLRVCGDCHT 534
GYVPD + + ++ + + E++A+ LLK I + N+R+ GDCH
Sbjct: 381 EMGYVPDTRYYRSLIMAMENKEQIFGYREEIAVVESLLKSKPRSAITLLTNIRIVGDCHD 440
Query: 535 AIKYISAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
+K +S I GR++I RD +H FK+G C C++ W
Sbjct: 441 MMKLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 202/399 (50%), Gaps = 12/399 (3%)
Query: 55 GSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVM----PEKNCVSWSAMVSGY 110
GS R+F + + KD SWN+++S A G + ++ LF+ M + + + ++
Sbjct: 267 GSMRSF-NAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFC 325
Query: 111 VACGDLDAA--VECFY---AAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTW 165
D+ + + C+ V S+ +A+I Y K +E++ L++ + L
Sbjct: 326 SRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECC 385
Query: 166 NAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVL--LGCSNLSALQLGKQVHQLV 223
N+++ + G +D +++F M++ G + ++L++VL L S +L VH
Sbjct: 386 NSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCA 445
Query: 224 CKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKAL 283
KS ++D SLI Y K G + + ++F ++ +I ++I+GYA++G G +
Sbjct: 446 IKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCV 505
Query: 284 HLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDL 343
+ EM + PD +T ++VL C+H+GLV+ G F+ + +GI + YACMVDL
Sbjct: 506 KMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDL 565
Query: 344 LGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSSATGY 403
LGRAG + +A L+ + +LL +CRIH+N + AA+ L+ L+P + Y
Sbjct: 566 LGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVY 625
Query: 404 VQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYSWIEI 442
+Q++ Y +E +IR ++++ GYS + +
Sbjct: 626 IQVSKFYFEIGDFEISRQIREIAASRELMREIGYSSVVV 664
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 148/321 (46%), Gaps = 21/321 (6%)
Query: 56 SARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCV-SWSAMVSGYVACG 114
SA FD M V+D ++N +ISG ++ G A L+A M S S S C
Sbjct: 64 SAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCS 123
Query: 115 DLDAAVECFYAAPVR------------SVITWTAMITGYMKFGRVESAERLFREMSLKTL 162
D E F ++ ++ +A++ Y V+ A +LF EM + L
Sbjct: 124 D-----ELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNL 178
Query: 163 VTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQL 222
N ++ + + G ++ +++ M G N L+ ++ GCS+ + GKQ+H L
Sbjct: 179 AVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSL 238
Query: 223 VCKSPLS-SDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEK 281
V KS + S+ L+ Y+ CGDL + F +P KD++SWN+++S A +G+
Sbjct: 239 VVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLD 298
Query: 282 ALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHY-ACM 340
+L LF +M+ G +P F++ L C+ + G Q + V G H + +
Sbjct: 299 SLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQ-IHCYVLKMGFDVSSLHVQSAL 357
Query: 341 VDLLGRAGRLPEAVDLIKSMP 361
+D+ G+ + + L +S+P
Sbjct: 358 IDMYGKCNGIENSALLYQSLP 378
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 148/336 (44%), Gaps = 36/336 (10%)
Query: 127 PVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFK 186
P V T I +K G + SA F EMS++ +VT+N +I+G G + ++L+
Sbjct: 42 PSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYA 101
Query: 187 SMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCG 246
M+ G + +A + SVL CS+ + G QVH V + ++L+ +YA
Sbjct: 102 EMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLR 161
Query: 247 DLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLL 306
+ A +LF ++ +++ N ++ + Q G ++ ++ M +G+ + +T+ ++
Sbjct: 162 LVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIR 221
Query: 307 ACNHAGLVDLGVQYFNMMVRD-------FGIKTKPEHYACMVDLLGRA------------ 347
C+H LV G Q +++V+ F ++Y+ DL G
Sbjct: 222 GCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVI 281
Query: 348 ------------GRLPEAVDLIKSMPF---KPHPAIFGTLLGACRIHKNLDLAEFAAKNL 392
G + +++DL M F +P F + L C + ++ + +
Sbjct: 282 SWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYV 341
Query: 393 LELDPSSATGYVQ--LANVYAAQNRWEHVARIRRSM 426
L++ ++ +VQ L ++Y N E+ A + +S+
Sbjct: 342 LKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSL 377
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 200/427 (46%), Gaps = 55/427 (12%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEK-IPEPNTVSYNIMLACHLHHFGVGSARA 59
M K+TVTW +++ + K +G ++A LFE + + M C L+ + S RA
Sbjct: 143 MPEKNTVTWTAMIDGYLK-YGLEDEAFALFEDYVKHGIRFTNERMFVCLLN---LCSRRA 198
Query: 60 FFD----------RMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSG 109
F+ ++ V + ++++ YAQ G + A F +M EK+ +SW+A++S
Sbjct: 199 EFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISA 258
Query: 110 --------------------------YVACGDLDAAVE---CFYAAPVRS---------- 130
+ C L A E + V S
Sbjct: 259 CSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTD 318
Query: 131 VITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLE 190
V T+++ Y K G + ++F MS + VTW ++IA + G E+ + LF+ M
Sbjct: 319 VFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKR 378
Query: 191 SGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKE 250
N L++ S+L C ++ AL LGK++H + K+ + + G++L+ +Y KCG+ ++
Sbjct: 379 RHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRD 438
Query: 251 AWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNH 310
A+ + Q+P +D+VSW AMISG + G +AL EM +G++P+ T+ + L AC +
Sbjct: 439 AFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACAN 498
Query: 311 AGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPAIFG 370
+ + +G ++ ++ + A ++ + + G + EA + SMP K +
Sbjct: 499 SESLLIGRSIHSIAKKNHALSNVFVGSA-LIHMYAKCGFVSEAFRVFDSMPEKNLVSWKA 557
Query: 371 TLLGACR 377
++G R
Sbjct: 558 MIMGYAR 564
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 141/263 (53%), Gaps = 8/263 (3%)
Query: 54 VGSARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWS-AMVSGYVA 112
+ R FD M ++T +W ++I+ +A+ G EA LF +M ++ ++ + +VS A
Sbjct: 335 ISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRA 394
Query: 113 CGDLDAAV-------ECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTW 165
CG + A + + + ++V + ++ Y K G A + +++ + +V+W
Sbjct: 395 CGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSW 454
Query: 166 NAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCK 225
AMI+G G + L K M++ G +PN + +S L C+N +L +G+ +H + K
Sbjct: 455 TAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKK 514
Query: 226 SPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHL 285
+ S+ G++LI MYAKCG + EA+ +F +P K++VSW AMI GYA++G +AL L
Sbjct: 515 NHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKL 574
Query: 286 FDEMRHDGMKPDWITFVAVLLAC 308
M +G + D F +L C
Sbjct: 575 MYRMEAEGFEVDDYIFATILSTC 597
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 148/326 (45%), Gaps = 71/326 (21%)
Query: 106 MVSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFRE--------- 156
++S V GDL A + F + P ++ +TWTAMI GY+K+G + A LF +
Sbjct: 123 LISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFT 182
Query: 157 ------------------------------MSLKTLVTWNAMIAGYVENGRAEDGLKLFK 186
+ + L+ ++++ Y + G L+ F
Sbjct: 183 NERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRAFD 242
Query: 187 SMLES-----------------GAK--------------PNALSLTSVLLGCSNLSALQL 215
M E G K PN ++ S+L CS AL+
Sbjct: 243 MMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRF 302
Query: 216 GKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQ 275
G+QVH LV K + +D GTSL+ MYAKCG++ + ++F + ++ V+W ++I+ +A+
Sbjct: 303 GRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAR 362
Query: 276 HGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPE 335
G GE+A+ LF M+ + + +T V++L AC G + LG + ++++ I+
Sbjct: 363 EGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKN-SIEKNVY 421
Query: 336 HYACMVDLLGRAGRLPEAVDLIKSMP 361
+ +V L + G +A ++++ +P
Sbjct: 422 IGSTLVWLYCKCGESRDAFNVLQQLP 447
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 114/258 (44%), Gaps = 50/258 (19%)
Query: 1 MKVKSTVTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFG-VGS--- 56
M ++TVTW SI++A A++ G E+A LF + + ++ N+ + L G VG+
Sbjct: 345 MSNRNTVTWTSIIAAHARE-GFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLL 403
Query: 57 -----ARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYV 111
A+ + +E K+ +T++ Y + G +A + +P ++ VSW+AM+SG
Sbjct: 404 GKELHAQIIKNSIE-KNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCS 462
Query: 112 ACGDLDAAVECF--------------YAAPVRS-------------------------VI 132
+ G A++ Y++ +++ V
Sbjct: 463 SLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVF 522
Query: 133 TWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESG 192
+A+I Y K G V A R+F M K LV+W AMI GY NG + LKL M G
Sbjct: 523 VGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEG 582
Query: 193 AKPNALSLTSVLLGCSNL 210
+ + ++L C ++
Sbjct: 583 FEVDDYIFATILSTCGDI 600
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
Query: 211 SALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMI 270
+ ++L K++H + K G +LIS + GDL A ++F +P K+ V+W AMI
Sbjct: 96 NGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMI 155
Query: 271 SGYAQHGAGEKALHLFDEMRHDGMK-PDWITFVAVLLACNHAGLVDLGVQYFNMMVR 326
GY ++G ++A LF++ G++ + FV +L C+ +LG Q MV+
Sbjct: 156 DGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVK 212
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 60/94 (63%), Positives = 74/94 (78%)
Query: 476 AGYVPDLEFALHDVGEELKEQLLLWHSEKLAIAYGLLKVPLGLPIRVFKNLRVCGDCHTA 535
AGYVP+ ++ LHD+ EE KE+ L+ HSE+LAIA+G++ P G IRV KNLR+CGDCH
Sbjct: 146 AGYVPETKYVLHDIDEEAKEKALMHHSERLAIAFGIINTPPGTTIRVMKNLRICGDCHNF 205
Query: 536 IKYISAIEGREIIVRDTTRFHHFKDGFCSCSDYW 569
IK +S+IE REIIVRD RFHHF+DG CSC DYW
Sbjct: 206 IKILSSIEDREIIVRDNKRFHHFRDGNCSCGDYW 239
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 164/316 (51%), Gaps = 27/316 (8%)
Query: 7 VTWNSILSAFAKKHGNFEQARQLFEKIP----EPNTVSYNIMLACHLHHFG--VGSARAF 60
+ +N+I+ K + + + A LF+++ PN V+Y+ +++C L ++G ++R
Sbjct: 257 LIYNTIIDGLCK-YKHMDDALNLFKEMETKGIRPNVVTYSSLISC-LCNYGRWSDASRLL 314
Query: 61 FDRMEVK---DTASWNTMISGYAQVGLMGEASMLFAVMPEKNC----VSWSAMVSGYVAC 113
D +E K D +++ +I + + G + EA L+ M +++ V++S++++G+
Sbjct: 315 SDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMH 374
Query: 114 GDLDAAVECFYAAPVR----SVITWTAMITGYMKFGRVESAERLFREMSLKTLV----TW 165
LD A + F + V+T+ +I G+ K+ RVE +FREMS + LV T+
Sbjct: 375 DRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 434
Query: 166 NAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCK 225
N +I G + G + ++FK M+ G PN ++ ++L G L+ V + + +
Sbjct: 435 NILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 494
Query: 226 SPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK----DIVSWNAMISGYAQHGAGEK 281
S + +I K G +++ W+LF + K D+V++N MISG+ + G+ E+
Sbjct: 495 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEE 554
Query: 282 ALHLFDEMRHDGMKPD 297
A LF EM+ DG P+
Sbjct: 555 ADALFKEMKEDGTLPN 570
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 186/399 (46%), Gaps = 31/399 (7%)
Query: 5 STVTWNSILSAFAKKHGNFEQARQLFEKIP----EPNTVSYNIMLACHLHHFGVGSARAF 60
+TVT+N+++ H +A L +++ +P+ V+Y +++ A
Sbjct: 185 NTVTFNTLIHGLFL-HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNL 243
Query: 61 FDRMEVKDTAS----WNTMISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSGYVA 112
++ME +NT+I G + M +A LF M K N V++S+++S
Sbjct: 244 LNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCN 303
Query: 113 CGDLDAAVECFYAAPVR----SVITWTAMITGYMKFGRVESAERLFREMSLKTL----VT 164
G A R V T++A+I ++K G++ AE+L+ EM +++ VT
Sbjct: 304 YGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVT 363
Query: 165 WNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVC 224
++++I G+ + R ++ ++F+ M+ P+ ++ +++ G ++ G +V + +
Sbjct: 364 YSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMS 423
Query: 225 KSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK----DIVSWNAMISGYAQHGAGE 280
+ L +T LI + GD A E+F ++ +I+++N ++ G ++G E
Sbjct: 424 QRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLE 483
Query: 281 KALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYF-NMMVRDFGIKTKPEHYAC 339
KA+ +F+ ++ M+P T+ ++ AG V+ G F N+ ++ G+K Y
Sbjct: 484 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK--GVKPDVVAYNT 541
Query: 340 MVDLLGRAGRLPEAVDLIKSMPFK---PHPAIFGTLLGA 375
M+ R G EA L K M P+ + TL+ A
Sbjct: 542 MISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/453 (20%), Positives = 180/453 (39%), Gaps = 79/453 (17%)
Query: 35 EPNTVSYNIMLACHLHHFGVGSARAFFDRMEVK----DTASWNTMISGYAQVGLMGEASM 90
EPN V+ + +L + H + A A D+M V +T ++NT+I G EA
Sbjct: 148 EPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMA 207
Query: 91 LFAVMPEKNC----VSWSAMVSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGR 146
L M K C V++ +V+G GD D A + M+ G+
Sbjct: 208 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN----------------LLNKMEQGK 251
Query: 147 VESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLG 206
+E ++ +N +I G + +D L LFK M G +PN ++ +S++
Sbjct: 252 LEPG-----------VLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 207 CSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK----- 261
N ++ + + ++ D ++LI + K G L EA +L+ ++ ++
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 262 ----------------------------------DIVSWNAMISGYAQHGAGEKALHLFD 287
D+V++N +I G+ ++ E+ + +F
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 420
Query: 288 EMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRA 347
EM G+ + +T+ ++ AG D+ + F MV D G+ Y ++D L +
Sbjct: 421 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD-GVPPNIMTYNTLLDGLCKN 479
Query: 348 GRLPEAVDLIKSMP-FKPHPAIFG---TLLGACRIHKNLDLAEFAAKNLLELDPSSATGY 403
G+L +A+ + + + K P I+ + G C+ K D + L+ Y
Sbjct: 480 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAY 539
Query: 404 VQLANVYAAQNRWEHVARIRRSMKENKVVKAPG 436
+ + + + E + + MKE+ + G
Sbjct: 540 NTMISGFCRKGSKEEADALFKEMKEDGTLPNSG 572
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 161/327 (49%), Gaps = 27/327 (8%)
Query: 6 TVTWNSILSAFAKKHGNFEQARQLFEKIP----EPNTVSYNIMLACHLHHFG--VGSARA 59
V + +I+ A + N A LF ++ PN V+YN ++ C L ++G ++R
Sbjct: 255 VVIYTTIIDALCN-YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC-LCNYGRWSDASRL 312
Query: 60 FFDRMEVK---DTASWNTMISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSGYVA 112
D +E K + +++ +I + + G + EA L+ M ++ + ++S++++G+
Sbjct: 313 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 372
Query: 113 CGDLDAAVECFYAAPVR----SVITWTAMITGYMKFGRVESAERLFREMSLKTLV----T 164
LD A F + +V+T+ +I G+ K RVE LFREMS + LV T
Sbjct: 373 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 432
Query: 165 WNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVC 224
+N +I G + G + K+FK M+ G P+ ++ + +L G L+ V + +
Sbjct: 433 YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 492
Query: 225 KSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK----DIVSWNAMISGYAQHGAGE 280
KS + D +I K G +++ W+LF + K +++ + MISG+ + G E
Sbjct: 493 KSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKE 552
Query: 281 KALHLFDEMRHDGMKPDWITFVAVLLA 307
+A LF EM+ DG P+ T+ ++ A
Sbjct: 553 EADALFREMKEDGTLPNSGTYNTLIRA 579
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 188/402 (46%), Gaps = 36/402 (8%)
Query: 7 VTWNSILSAFAKKHGN-----FEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFF 61
VT +S+L+ + HG Q+F +PNTV++N ++ H A A
Sbjct: 151 VTLSSLLNGYC--HGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALI 208
Query: 62 DRMEVK----DTASWNTMISGYAQVGLMGEASMLFAVMP----EKNCVSWSAMVSGYVAC 113
DRM + D ++ T+++G + G + A L M E + V ++ ++
Sbjct: 209 DRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNY 268
Query: 114 GDLDAAVECFYAAPVR----SVITWTAMITGYMKFGRVESAERLFREMSLKTL----VTW 165
+++ A+ F + +V+T+ ++I +GR A RL +M + + VT+
Sbjct: 269 KNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTF 328
Query: 166 NAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCK 225
+A+I +V+ G+ + KL+ M++ P+ + +S++ G L K + +L+
Sbjct: 329 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 388
Query: 226 SPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK----DIVSWNAMISGYAQHGAGEK 281
+ +LI + K ++E ELF ++ ++ + V++N +I G Q G +
Sbjct: 389 KDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDM 448
Query: 282 ALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPE--HYAC 339
A +F +M DG+ PD IT+ +L G ++ + F + + K +P+ Y
Sbjct: 449 AQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS---KMEPDIYTYNI 505
Query: 340 MVDLLGRAGRLPEAVDLIKSMPF---KPHPAIFGTLL-GACR 377
M++ + +AG++ + DL S+ KP+ I+ T++ G CR
Sbjct: 506 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCR 547
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 174/395 (44%), Gaps = 64/395 (16%)
Query: 8 TWNSILSAFAKKHGNFEQARQLFEKIP----EPNTVSYNIMLACHLHHFGVGSARAFFDR 63
T+ ++++ K+ G+ + A L +K+ E + V Y ++ ++ V A F
Sbjct: 222 TYGTVVNGLCKR-GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTE 280
Query: 64 MEVK----DTASWNTMISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSGYVACGD 115
M+ K + ++N++I G +AS L + M E+ N V++SA++ +V G
Sbjct: 281 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 340
Query: 116 LDAAVECFYAAPVRSV----ITWTAMITGYMKFGRVESAERLFREMSLK----TLVTWNA 167
L A + + RS+ T++++I G+ R++ A+ +F M K +VT+N
Sbjct: 341 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 400
Query: 168 MIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSP 227
+I G+ + R E+G++LF+ M + G
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRG----------------------------------- 425
Query: 228 LSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK----DIVSWNAMISGYAQHGAGEKAL 283
L +T +LI + GD A ++F ++ DI++++ ++ G ++G EKAL
Sbjct: 426 LVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL 485
Query: 284 HLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDL 343
+F+ ++ M+PD T+ ++ AG V+ G F + G+K Y M+
Sbjct: 486 VVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK-GVKPNVIIYTTMISG 544
Query: 344 LGRAGRLPEAVDLIKSMPFK---PHPAIFGTLLGA 375
R G EA L + M P+ + TL+ A
Sbjct: 545 FCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 579
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 124/284 (43%), Gaps = 19/284 (6%)
Query: 162 LVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGC-SNLSALQLGKQVH 220
+VT ++++ GY R + + L M +PN ++ +++ G + A + +
Sbjct: 150 IVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALID 209
Query: 221 QLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPR----KDIVSWNAMISGYAQH 276
++V + T GT +++ K GD+ A L ++ + D+V + +I +
Sbjct: 210 RMVARGCQPDLFTYGT-VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNY 268
Query: 277 GAGEKALHLFDEMRHDGMKPDWITFVAVLLA-CNHAGLVDLGVQYFNMMVRDFGIKTKPE 335
AL+LF EM + G++P+ +T+ +++ CN+ D +M+ R K P
Sbjct: 269 KNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER----KINPN 324
Query: 336 --HYACMVDLLGRAGRLPEAVDLIKSM---PFKPHPAIFGTLLGACRIHKNLDLAEFAAK 390
++ ++D + G+L EA L M P + +L+ +H LD A+ +
Sbjct: 325 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 384
Query: 391 NLLELD--PSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVV 432
++ D P+ T Y L + R E + R M + +V
Sbjct: 385 LMISKDCFPNVVT-YNTLIKGFCKAKRVEEGMELFREMSQRGLV 427
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 166/328 (50%), Gaps = 27/328 (8%)
Query: 5 STVTWNSILSAFAKKHGNFEQARQLFEKIPE----PNTVSYNIMLACHLHHFG--VGSAR 58
V +++++ + K + + + A LF ++ P+ +Y+ +++C L ++G ++R
Sbjct: 239 DVVIYSTVIDSLCK-YRHVDDALNLFTEMDNKGIRPDVFTYSSLISC-LCNYGRWSDASR 296
Query: 59 AFFDRMEVK---DTASWNTMISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSGYV 111
D +E K + ++N++I +A+ G + EA LF M ++ N V+++++++G+
Sbjct: 297 LLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFC 356
Query: 112 ACGDLDAAVECFYAAPVRS----VITWTAMITGYMKFGRVESAERLFREMSLKTLV---- 163
LD A + F + V+T+ +I G+ K +V LFR+MS + LV
Sbjct: 357 MHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTV 416
Query: 164 TWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLV 223
T+ +I G+ + ++ +FK M+ G PN ++ ++L G L+ V + +
Sbjct: 417 TYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 476
Query: 224 CKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK----DIVSWNAMISGYAQHGAG 279
KS + D + K G +++ W+LF + K D++++N MISG+ + G
Sbjct: 477 QKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLK 536
Query: 280 EKALHLFDEMRHDGMKPDWITFVAVLLA 307
E+A LF +M+ DG PD T+ ++ A
Sbjct: 537 EEAYTLFIKMKEDGPLPDSGTYNTLIRA 564
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 185/406 (45%), Gaps = 40/406 (9%)
Query: 5 STVTWNSILSAFAKKHGN-FEQARQLFEKIPE----PNTVSYNIMLACHLHHFGVGSARA 59
S VT NS+L+ F HGN +A L +++ E P+TV++ ++ H A A
Sbjct: 134 SIVTLNSLLNGFC--HGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVA 191
Query: 60 FFDRMEVK----DTASWNTMISGYAQVGLMGEASMLFAVMP----EKNCVSWSAMVSGYV 111
+RM VK D ++ +I+G + G A L M E + V +S ++
Sbjct: 192 LVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLC 251
Query: 112 ACGDLDAAVECFYAAPVR----SVITWTAMITGYMKFGRVESAERLFREMSLKTL----V 163
+D A+ F + V T++++I+ +GR A RL +M + + V
Sbjct: 252 KYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVV 311
Query: 164 TWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLV 223
T+N++I + + G+ + KLF M++ PN ++ S++ G L +Q+ L+
Sbjct: 312 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM 371
Query: 224 CKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK----DIVSWNAMISGYAQHGAG 279
D +LI+ + K + + ELF + R+ + V++ +I G+ Q
Sbjct: 372 VSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDC 431
Query: 280 EKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPE---- 335
+ A +F +M DG+ P+ +T+ +L GL G M+V ++ K+K E
Sbjct: 432 DNAQMVFKQMVSDGVHPNIMTYNTLL-----DGLCKNGKLEKAMVVFEYLQKSKMEPDIY 486
Query: 336 HYACMVDLLGRAGRLPEAVDLIKSMPF---KPHPAIFGTLL-GACR 377
Y M + + +AG++ + DL S+ KP + T++ G C+
Sbjct: 487 TYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCK 532
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 160/327 (48%), Gaps = 28/327 (8%)
Query: 7 VTWNSILSAFAKKHGNFEQARQLFEKIP----EPNTVSYNIMLACHLHHFGVGSARAFFD 62
VT+ ++++ K+ G + A L K+ E + V YN ++ + + A F+
Sbjct: 216 VTYGAVINGLCKR-GEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFN 274
Query: 63 RMEVK----DTASWNTMISGYAQVGLMGEASMLFAVMPEKNC----VSWSAMVSGYVACG 114
+ME K D ++N +IS G +AS L + M EKN V ++A++ +V G
Sbjct: 275 KMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEG 334
Query: 115 DLDAAVECFYAAPVRS------VITWTAMITGYMKFGRVESAERLFREMSLKTLV----T 164
L A E Y V+S V+ + +I G+ K+ RVE +FREMS + LV T
Sbjct: 335 KLVEA-EKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 393
Query: 165 WNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVC 224
+ +I G+ + ++ +FK M+ G P+ ++ +L G N ++ V + +
Sbjct: 394 YTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQ 453
Query: 225 KSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK----DIVSWNAMISGYAQHGAGE 280
K + D T++I K G +++ W+LF + K ++V++ M+SG+ + G E
Sbjct: 454 KRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKE 513
Query: 281 KALHLFDEMRHDGMKPDWITFVAVLLA 307
+A LF EM+ DG P+ T+ ++ A
Sbjct: 514 EADALFVEMKEDGPLPNSGTYNTLIRA 540
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 114/451 (25%), Positives = 204/451 (45%), Gaps = 40/451 (8%)
Query: 5 STVTWNSILSAFAKKHGN-FEQARQLFEKIPE----PNTVSYNIMLACHLHHFGVGSARA 59
S VT NS+L+ F HGN +A L +++ E P+TV++ ++ H A A
Sbjct: 144 SIVTLNSLLNGFC--HGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVA 201
Query: 60 FFDRMEVK----DTASWNTMISGYAQVGLMGEASMLFAVMP----EKNCVSWSAMVSGYV 111
+RM VK D ++ +I+G + G A L M E + V ++ ++ G
Sbjct: 202 LVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLC 261
Query: 112 ACGDLDAAVECFYAAPVR----SVITWTAMITGYMKFGRVESAERLFREMSLKT----LV 163
+D A + F + V T+ +I+ +GR A RL +M K LV
Sbjct: 262 KYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLV 321
Query: 164 TWNAMIAGYVENGRAEDGLKLFKSMLESG-AKPNALSLTSVLLGCSNLSALQLGKQVHQL 222
+NA+I +V+ G+ + KL+ M++S P+ ++ +++ G ++ G +V +
Sbjct: 322 FFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFRE 381
Query: 223 VCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK----DIVSWNAMISGYAQHGA 278
+ + L +T T+LI + + D A +F Q+ DI+++N ++ G +G
Sbjct: 382 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGN 441
Query: 279 GEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYA 338
E AL +F+ M+ MK D +T+ ++ A AG V+ G F + G+K Y
Sbjct: 442 VETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK-GVKPNVVTYT 500
Query: 339 CMVDLLGRAGRLPEA----VDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLE 394
M+ R G EA V++ + P P+ + TL+ A R+ D E A+ L++
Sbjct: 501 TMMSGFCRKGLKEEADALFVEMKEDGPL-PNSGTYNTLIRA-RLR---DGDEAASAELIK 555
Query: 395 LDPSSATGYVQLANVYAAQNRWEHVARIRRS 425
+ G+ A+ + H R+ +S
Sbjct: 556 --EMRSCGFAGDASTFGLVTNMLHDGRLDKS 584
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 161/328 (49%), Gaps = 23/328 (7%)
Query: 5 STVTWNSILSAFAKKH---GNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFF 61
+ VT+N+++ + K F+ R + K EPN +SYN+++ +
Sbjct: 239 NVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVL 298
Query: 62 DRMEVK----DTASWNTMISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSGYVAC 113
M + D ++NT+I GY + G +A ++ A M + +++++++
Sbjct: 299 TEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA 358
Query: 114 GDLDAAVECFYAAPVRSVI----TWTAMITGYMKFGRVESAERLFREMSLK----TLVTW 165
G+++ A+E VR + T+T ++ G+ + G + A R+ REM+ ++VT+
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418
Query: 166 NAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCK 225
NA+I G+ G+ ED + + + M E G P+ +S ++VL G + +V + + +
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE 478
Query: 226 SPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPR----KDIVSWNAMISGYAQHGAGEK 281
+ DT +SLI + + KEA +L+ ++ R D ++ A+I+ Y G EK
Sbjct: 479 KGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEK 538
Query: 282 ALHLFDEMRHDGMKPDWITFVAVLLACN 309
AL L +EM G+ PD +T+ ++ N
Sbjct: 539 ALQLHNEMVEKGVLPDVVTYSVLINGLN 566
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/433 (21%), Positives = 195/433 (45%), Gaps = 65/433 (15%)
Query: 7 VTWNSILSAFAKKHGNFEQARQLFEKIPE----PNTVSYNIMLACHLHHFGVGSARAFFD 62
+++N++L A + N A +F+++ E PN +YNI++ + A FD
Sbjct: 170 LSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFD 229
Query: 63 RMEVK----DTASWNTMISGYAQV-----------------------------------G 83
+ME K + ++NT+I GY ++ G
Sbjct: 230 KMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREG 289
Query: 84 LMGEASMLFAVMPEK----NCVSWSAMVSGYVACGDLDAAVECFYAAPVR-----SVITW 134
M E S + M + + V+++ ++ GY G+ A+ +A +R SVIT+
Sbjct: 290 RMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQAL-VMHAEMLRHGLTPSVITY 348
Query: 135 TAMITGYMKFGRVESAERLFREMSLKTLV----TWNAMIAGYVENGRAEDGLKLFKSMLE 190
T++I K G + A +M ++ L T+ ++ G+ + G + ++ + M +
Sbjct: 349 TSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMND 408
Query: 191 SGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKE 250
+G P+ ++ +++ G ++ V + + + LS D + ++++S + + D+ E
Sbjct: 409 NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDE 468
Query: 251 AWELFVQIPRK----DIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLL 306
A + ++ K D ++++++I G+ + ++A L++EM G+ PD T+ A++
Sbjct: 469 ALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALIN 528
Query: 307 ACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFK--- 363
A G ++ +Q N MV G+ Y+ +++ L + R EA L+ + ++
Sbjct: 529 AYCMEGDLEKALQLHNEMVEK-GVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESV 587
Query: 364 PHPAIFGTLLGAC 376
P + TL+ C
Sbjct: 588 PSDVTYHTLIENC 600
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 136/315 (43%), Gaps = 50/315 (15%)
Query: 130 SVITWTAMITGYMKFGRVESAERLFREMSLK----TLVTWNAMIAGYVENGRAEDGLKLF 185
+V T+ +I G+ G ++ A LF +M K +VT+N +I GY + + +DG KL
Sbjct: 204 NVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLL 263
Query: 186 KSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKC 245
+SM G +PN +S V+ G +C+
Sbjct: 264 RSMALKGLEPNLISYNVVING----------------LCRE------------------- 288
Query: 246 GDLKEAWELFVQIPRK----DIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITF 301
G +KE + ++ R+ D V++N +I GY + G +AL + EM G+ P IT+
Sbjct: 289 GRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITY 348
Query: 302 VAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMP 361
+++ + AG ++ +++ + M R G+ Y +VD + G + EA +++ M
Sbjct: 349 TSLIHSMCKAGNMNRAMEFLDQM-RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMN 407
Query: 362 ---FKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLE--LDPSSATGYVQLANVYAAQNRW 416
F P + L+ + ++ A +++ E L P Y + + +
Sbjct: 408 DNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSP-DVVSYSTVLSGFCRSYDV 466
Query: 417 EHVARIRRSMKENKV 431
+ R++R M E +
Sbjct: 467 DEALRVKREMVEKGI 481
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 147/337 (43%), Gaps = 44/337 (13%)
Query: 5 STVTWNSILSAFAKKHGNFEQARQLFEKIPE----PNTVSYNIMLACHLHHFGVGSA--- 57
S VT+N++++ G E A + E + E P+ VSY+ +L+ + V A
Sbjct: 414 SVVTYNALINGHCVT-GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRV 472
Query: 58 -RAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVM------PEKNCVSWSAMVSGY 110
R ++ DT +++++I G+ + EA L+ M P++ +++A+++ Y
Sbjct: 473 KREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDE--FTYTALINAY 530
Query: 111 VACGDLDAAV----ECFYAAPVRSVITWTAMITGYMKFGRVESAERL----FREMSLKTL 162
GDL+ A+ E + V+T++ +I G K R A+RL F E S+ +
Sbjct: 531 CMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSD 590
Query: 163 VTWN---------------AMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGC 207
VT++ ++I G+ G + ++F+SML KP+ + ++ G
Sbjct: 591 VTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGH 650
Query: 208 SNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVS-- 265
++ +++ + KS T +L+ K G + E + V + R +S
Sbjct: 651 CRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEA 710
Query: 266 --WNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWIT 300
++ + G + L + EM DG P+ I+
Sbjct: 711 EQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 164/328 (50%), Gaps = 27/328 (8%)
Query: 5 STVTWNSILSAFAKKHGNFEQARQLFEKIP----EPNTVSYNIMLACHLHHFG--VGSAR 58
V +N+I+ + K + + + A LF+++ PN V+Y+ +++C L +G +++
Sbjct: 259 DVVIFNTIIDSLCK-YRHVDDALNLFKEMETKGIRPNVVTYSSLISC-LCSYGRWSDASQ 316
Query: 59 AFFDRMEVK---DTASWNTMISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSGYV 111
D +E K + ++N +I + + G EA L+ M ++ + +++++V+G+
Sbjct: 317 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC 376
Query: 112 ACGDLDAAVECFYAAPVRS----VITWTAMITGYMKFGRVESAERLFREMSLKTLV---- 163
LD A + F + V+T+ +I G+ K RVE LFREMS + LV
Sbjct: 377 MHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 436
Query: 164 TWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLV 223
T+ +I G +G ++ K+FK M+ G P+ ++ + +L G N L+ +V +
Sbjct: 437 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496
Query: 224 CKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK----DIVSWNAMISGYAQHGAG 279
KS + D T++I K G + + W+LF + K ++V++N MISG
Sbjct: 497 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 556
Query: 280 EKALHLFDEMRHDGMKPDWITFVAVLLA 307
++A L +M+ DG P+ T+ ++ A
Sbjct: 557 QEAYALLKKMKEDGPLPNSGTYNTLIRA 584
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/451 (23%), Positives = 205/451 (45%), Gaps = 32/451 (7%)
Query: 8 TWNSILSAFAKKHGNFEQARQLFEKIP----EPNTVSYNIMLACHLHHFGVGSARAFFDR 63
T+N +++ F ++ A L K+ EP+ V+ + +L + H + A A D+
Sbjct: 122 TYNILINCFCRR-SQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 64 M----EVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNC----VSWSAMVSGYVACGD 115
M DT ++ T+I G EA L M ++ C V++ +V+G GD
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 116 LDAAVECFY---AAPVRS-VITWTAMITGYMKFGRVESAERLFREMSLK----TLVTWNA 167
D A+ AA + + V+ + +I K+ V+ A LF+EM K +VT+++
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 300
Query: 168 MIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSP 227
+I+ GR D +L M+E PN ++ +++ ++++ + K
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 228 LSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKD----IVSWNAMISGYAQHGAGEKAL 283
+ D SL++ + L +A ++F + KD +V++N +I G+ + E
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420
Query: 284 HLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDL 343
LF EM H G+ D +T+ ++ H G D + F MV D G+ Y+ ++D
Sbjct: 421 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDG 479
Query: 344 LGRAGRLPEAV---DLIKSMPFKPHPAIFGTLL-GACRIHKNLDLAE-FAAKNLLELDPS 398
L G+L +A+ D ++ K I+ T++ G C+ K D + F + +L + P+
Sbjct: 480 LCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 539
Query: 399 SATGYVQLANVYAAQNRWEHVARIRRSMKEN 429
T ++ + + + E A +++ MKE+
Sbjct: 540 VVTYNTMISGLCSKRLLQEAYALLKK-MKED 569
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 163/327 (49%), Gaps = 27/327 (8%)
Query: 6 TVTWNSILSAFAKKHGNFEQARQLFEKIPE----PNTVSYNIMLACHLHHFG--VGSARA 59
V +N+I+ A + N A LF ++ PN V+YN ++ C L ++G ++R
Sbjct: 256 VVIYNTIIDALCN-YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC-LCNYGRWSDASRL 313
Query: 60 FFDRMEVK---DTASWNTMISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSGYVA 112
D +E K + +++ +I + + G + EA L+ M ++ + ++S++++G+
Sbjct: 314 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 373
Query: 113 CGDLDAAVECFYAAPVR----SVITWTAMITGYMKFGRVESAERLFREMSLKTLV----T 164
LD A F + +V+T+ +I G+ K RV+ LFREMS + LV T
Sbjct: 374 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT 433
Query: 165 WNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVC 224
+ +I G+ + ++ +FK M+ G P+ ++ + +L G N ++ V + +
Sbjct: 434 YTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQ 493
Query: 225 KSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK----DIVSWNAMISGYAQHGAGE 280
+S + D +I K G +++ W+LF + K ++V++ M+SG+ + G E
Sbjct: 494 RSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKE 553
Query: 281 KALHLFDEMRHDGMKPDWITFVAVLLA 307
+A LF EM+ +G PD T+ ++ A
Sbjct: 554 EADALFREMKEEGPLPDSGTYNTLIRA 580
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 176/398 (44%), Gaps = 68/398 (17%)
Query: 7 VTWNSILSAFAKKHGNFEQARQLFEKIP----EPNTVSYNIMLACHLHHFGVGSARAFFD 62
VT+ +++ K+ G+ + A L +K+ EP V YN ++ ++ V A F
Sbjct: 222 VTYGIVVNGLCKR-GDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFT 280
Query: 63 RMEVK----DTASWNTMISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSGYVACG 114
M+ K + ++N++I G +AS L + M E+ N V++SA++ +V G
Sbjct: 281 EMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG 340
Query: 115 DLDAAVECFYAAPVRSV----ITWTAMITGYMKFGRVESAERLFREMSLK----TLVTWN 166
L A + + RS+ T++++I G+ R++ A+ +F M K +VT+N
Sbjct: 341 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 400
Query: 167 AMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLG------CSNLSALQLGKQVH 220
+I G+ + R ++G++LF+ M + G N ++ T+++ G C N
Sbjct: 401 TLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDN----------A 450
Query: 221 QLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGE 280
Q+V K +S +P DI++++ ++ G +G E
Sbjct: 451 QIVFKQMVSDGV-------------------------LP--DIMTYSILLDGLCNNGKVE 483
Query: 281 KALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACM 340
AL +F+ ++ M+PD T+ ++ AG V+ G F + G+K Y M
Sbjct: 484 TALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK-GVKPNVVTYTTM 542
Query: 341 VDLLGRAGRLPEAVDLIKSMPFK---PHPAIFGTLLGA 375
+ R G EA L + M + P + TL+ A
Sbjct: 543 MSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRA 580
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 152/344 (44%), Gaps = 25/344 (7%)
Query: 5 STVTWNSILSAFAKKHGNFEQARQLFEKIPE----PNTVSYNIMLACHLHHFGVGSARAF 60
S V ++ +LSA AK + F+ L E++ N +Y+I++ C + A A
Sbjct: 80 SIVEFSKLLSAIAKMN-KFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 61 FDRMEV----KDTASWNTMISGYAQVGLMGEASMLFAVMPE----KNCVSWSAMVSGYVA 112
+M D + N++++G+ + +A L M E + +++ ++ G
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
Query: 113 CGDLDAAVECFYAAPVR----SVITWTAMITGYMKFGRVESAERLFREMSLKTL----VT 164
AV V+ ++T+ ++ G K G ++ A L ++M + V
Sbjct: 199 HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVI 258
Query: 165 WNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVC 224
+N +I D L LF M G +PN ++ S++ N ++ +
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 318
Query: 225 KSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK----DIVSWNAMISGYAQHGAGE 280
+ ++ + ++LI + K G L EA +L+ ++ ++ DI +++++I+G+ H +
Sbjct: 319 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 378
Query: 281 KALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMM 324
+A H+F+ M P+ +T+ ++ A VD G++ F M
Sbjct: 379 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM 422
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 157/341 (46%), Gaps = 23/341 (6%)
Query: 5 STVTWNSILSAFAKKHGNFEQARQLFEKIPE----PNTVSYNIMLACHLHHFGVGSA--- 57
V +++I+ K G+ A+ LF ++ E PN +YN M+ FG S
Sbjct: 295 DVVIYSAIIDRLCKD-GHHSDAQYLFSEMLEKGIAPNVFTYNCMID-GFCSFGRWSDAQR 352
Query: 58 --RAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSGYV 111
R +R D ++N +IS + G + EA L M + + V++++M+ G+
Sbjct: 353 LLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFC 412
Query: 112 ACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLV----TWNA 167
D A F V+T+ +I Y + RV+ +L RE+S + LV T+N
Sbjct: 413 KHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 472
Query: 168 MIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSP 227
+I G+ E LF+ M+ G P+ ++ +L G L+ ++ +++ S
Sbjct: 473 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 532
Query: 228 LSSDTTAGTSLISMYAKCGDLKEAWELFVQIP----RKDIVSWNAMISGYAQHGAGEKAL 283
+ DT A +I K + EAW+LF +P D+ ++N MISG+ A A
Sbjct: 533 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 592
Query: 284 HLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMM 324
LF +M+ +G +PD T+ ++ C AG +D ++ + M
Sbjct: 593 VLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 167/408 (40%), Gaps = 50/408 (12%)
Query: 32 KIPEPNTVSYNIMLACHLHHFGVGSARAFFDRME----VKDTASWNTMISGYAQVGLMGE 87
+IP N S+NI++ C + + + F ++ D ++NT++ G + E
Sbjct: 136 RIP-LNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISE 194
Query: 88 ASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFY---------------AAPVR--- 129
A LF M E + A+ V G L V F AA V
Sbjct: 195 ALALFGYMVETGFLEAVALFDQMVEIG-LTPVVITFNTLINGLCLEGRVLEAAALVNKMV 253
Query: 130 ------SVITWTAMITGYMKFGRVESAERLFREMSLK----TLVTWNAMIAGYVENGRAE 179
V+T+ ++ G K G +SA L +M +V ++A+I ++G
Sbjct: 254 GKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHS 313
Query: 180 DGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLI 239
D LF MLE G PN + ++ G + +++ + + + ++ D +LI
Sbjct: 314 DAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 373
Query: 240 SMYAKCGDLKEAWELFVQIPRK----DIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMK 295
S K G L EA +L ++ + D V++N+MI G+ +H + A H+FD M
Sbjct: 374 SASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----AS 429
Query: 296 PDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVD 355
PD +TF ++ A VD G+Q + R G+ Y ++ L A D
Sbjct: 430 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRR-GLVANTTTYNTLIHGFCEVDNLNAAQD 488
Query: 356 LIKSM---PFKPHPAIFGTLL-GAC---RIHKNLDLAEFAAKNLLELD 396
L + M P LL G C ++ + L+L E + ++LD
Sbjct: 489 LFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD 536
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 156/340 (45%), Gaps = 59/340 (17%)
Query: 7 VTWNSILSAFAKKHGNFEQARQLFEKIP----EPNTVSYNIMLACHLHHFGVGSARAFFD 62
VT+N+++ A K F+Q + F+++ +P+ +++N +LA +AR FD
Sbjct: 304 VTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFD 363
Query: 63 RMEVK----DTASWNTMISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSGYVACG 114
M + D S+NT++ + G M A + A MP K N VS+S ++ G+ G
Sbjct: 364 EMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAG 423
Query: 115 DLDAAVECF----YAAPVRSVITWTAMITGYMKFGRVESAERLFREMS----LKTLVTWN 166
D A+ F Y +++ +++ Y K GR E A + REM+ K +VT+N
Sbjct: 424 RFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYN 483
Query: 167 AMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKS 226
A++ GY + G+ ++ K+F M PN L+
Sbjct: 484 ALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTY-------------------------- 517
Query: 227 PLSSDTTAGTSLISMYAKCGDLKEAWELFVQIP----RKDIVSWNAMISGYAQHGAGEKA 282
++LI Y+K G KEA E+F + R D+V ++A+I ++G A
Sbjct: 518 ---------STLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSA 568
Query: 283 LHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFN 322
+ L DEM +G+ P+ +T+ +++ A + +D Y N
Sbjct: 569 VSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSN 608
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 122/255 (47%), Gaps = 17/255 (6%)
Query: 135 TAMITGYMKFGRVESAERLFREMSL-----KTLVTWNAMIAGYVENGRAEDGLKLFKSML 189
+AMI+ ++G+V A+R+F E + T+ ++A+I+ Y +G E+ + +F SM
Sbjct: 237 SAMISTLGRYGKVTIAKRIF-ETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMK 295
Query: 190 ESGAKPNALSLTSVLLGCSN--LSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGD 247
E G +PN ++ +V+ C + Q+ K ++ ++ + D SL+++ ++ G
Sbjct: 296 EYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQ-RNGVQPDRITFNSLLAVCSRGGL 354
Query: 248 LKEAWELFVQIPRK----DIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVA 303
+ A LF ++ + D+ S+N ++ + G + A + +M + P+ +++
Sbjct: 355 WEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYST 414
Query: 304 VLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMP-- 361
V+ AG D + F M R GI Y ++ + + GR EA+D+++ M
Sbjct: 415 VIDGFAKAGRFDEALNLFGEM-RYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV 473
Query: 362 -FKPHPAIFGTLLGA 375
K + LLG
Sbjct: 474 GIKKDVVTYNALLGG 488
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 93/201 (46%), Gaps = 7/201 (3%)
Query: 233 TAGTSLISMYAKCGDLKEAWEL-FVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRH 291
+A S + Y K K +E F + +++A+IS Y + G E+A+ +F+ M+
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 292 DGMKPDWITFVAVLLACNHAGLVDLGV-QYFNMMVRDFGIKTKPEHYACMVDLLGRAGRL 350
G++P+ +T+ AV+ AC G+ V ++F+ M R+ G++ + ++ + R G
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRN-GVQPDRITFNSLLAVCSRGGLW 355
Query: 351 PEAVDLIKSMP---FKPHPAIFGTLLGACRIHKNLDLA-EFAAKNLLELDPSSATGYVQL 406
A +L M + + TLL A +DLA E A+ ++ + Y +
Sbjct: 356 EAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTV 415
Query: 407 ANVYAAQNRWEHVARIRRSMK 427
+ +A R++ + M+
Sbjct: 416 IDGFAKAGRFDEALNLFGEMR 436
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 159/339 (46%), Gaps = 23/339 (6%)
Query: 7 VTWNSILSAFAKKHGNFEQARQLFEKIPE----PNTVSYNIMLACHLHHFG--VGSARAF 60
V +++I+ K G+ A+ LF ++ E PN +YN M+ FG + R
Sbjct: 297 VIYSAIIDRLCKD-GHHSDAQYLFSEMLEKGIAPNVFTYNCMID-GFCSFGRWSDAQRLL 354
Query: 61 FDRMEVK---DTASWNTMISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSGYVAC 113
D +E + D ++N +IS + G + EA L M + + V++++M+ G+
Sbjct: 355 RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKH 414
Query: 114 GDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLV----TWNAMI 169
D A F V+T+ +I Y + RV+ +L RE+S + LV T+N +I
Sbjct: 415 NRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI 474
Query: 170 AGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLS 229
G+ E LF+ M+ G P+ ++ +L G L+ ++ +++ S +
Sbjct: 475 HGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKID 534
Query: 230 SDTTAGTSLISMYAKCGDLKEAWELFVQIP----RKDIVSWNAMISGYAQHGAGEKALHL 285
DT A +I K + EAW+LF +P D+ ++N MISG+ A A L
Sbjct: 535 LDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVL 594
Query: 286 FDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMM 324
F +M+ +G +PD T+ ++ C AG +D ++ + M
Sbjct: 595 FHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 167/408 (40%), Gaps = 50/408 (12%)
Query: 32 KIPEPNTVSYNIMLACHLHHFGVGSARAFFDRME----VKDTASWNTMISGYAQVGLMGE 87
+IP N S+NI++ C + + + F ++ D ++NT++ G + E
Sbjct: 136 RIP-LNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISE 194
Query: 88 ASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFY---------------AAPVR--- 129
A LF M E + A+ V G L V F AA V
Sbjct: 195 ALALFGYMVETGFLEAVALFDQMVEIG-LTPVVITFNTLINGLCLEGRVLEAAALVNKMV 253
Query: 130 ------SVITWTAMITGYMKFGRVESAERLFREMSLK----TLVTWNAMIAGYVENGRAE 179
V+T+ ++ G K G +SA L +M +V ++A+I ++G
Sbjct: 254 GKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHS 313
Query: 180 DGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLI 239
D LF MLE G PN + ++ G + +++ + + + ++ D +LI
Sbjct: 314 DAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 373
Query: 240 SMYAKCGDLKEAWELFVQIPRK----DIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMK 295
S K G L EA +L ++ + D V++N+MI G+ +H + A H+FD M
Sbjct: 374 SASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----AS 429
Query: 296 PDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVD 355
PD +TF ++ A VD G+Q + R G+ Y ++ L A D
Sbjct: 430 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRR-GLVANTTTYNTLIHGFCEVDNLNAAQD 488
Query: 356 LIKSM---PFKPHPAIFGTLL-GAC---RIHKNLDLAEFAAKNLLELD 396
L + M P LL G C ++ + L+L E + ++LD
Sbjct: 489 LFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD 536
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 177/383 (46%), Gaps = 45/383 (11%)
Query: 7 VTWNSILSAFAKKHGNFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRME- 65
+T+ +++ K G + A+ LF +IP+P V +N ++ + H + A+A M
Sbjct: 323 ITYGYLMNGLCKI-GRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVT 381
Query: 66 ----VKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVE 121
V D ++N++I GY + GL+G A + M K C
Sbjct: 382 SYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKP------------------- 422
Query: 122 CFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTL----VTWNAMIAGYVENGR 177
+V ++T ++ G+ K G+++ A + EMS L V +N +I+ + + R
Sbjct: 423 --------NVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474
Query: 178 AEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTS 237
+ +++F+ M G KP+ + S++ G + ++ + + + + ++T +
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534
Query: 238 LISMYAKCGDLKEAW----ELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDG 293
LI+ + + G++KEA E+ Q D +++N++I G + G +KA LF++M DG
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 294 MKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEA 353
P I+ ++ +G+V+ V++ MV G + +++ L RAGR+ +
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLR-GSTPDIVTFNSLINGLCRAGRIEDG 653
Query: 354 VDLIKSMP---FKPHPAIFGTLL 373
+ + + + P F TL+
Sbjct: 654 LTMFRKLQAEGIPPDTVTFNTLM 676
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 173/402 (43%), Gaps = 65/402 (16%)
Query: 36 PNTVSYNIMLACHLHHFGVGSARAFFDRME----VKDTASWNTMISGYAQVGLMGEASML 91
PN+V Y ++ V A + M V D ++N +I G + + EA+ +
Sbjct: 250 PNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKM 309
Query: 92 FAVM------PEKNCVSWSAMVSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFG 145
M P+ +++ +++G G +DAA + FY P ++ + +I G++ G
Sbjct: 310 VNRMLIRGFAPDD--ITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHG 367
Query: 146 RVESAERLFREMS-----LKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSL 200
R++ A+ + +M + + T+N++I GY + G L++ M G KPN S
Sbjct: 368 RLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSY 427
Query: 201 TSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPR 260
T ++ G L + V + L +T LIS + K + EA E+F ++PR
Sbjct: 428 TILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPR 487
Query: 261 K----DIVSWNAMISG-----------------------------------YAQHGAGEK 281
K D+ ++N++ISG + + G ++
Sbjct: 488 KGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKE 547
Query: 282 ALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYAC-- 339
A L +EM G D IT+ +++ AG VD F M+RD P + +C
Sbjct: 548 ARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD---GHAPSNISCNI 604
Query: 340 MVDLLGRAGRLPEAVDLIKSMPFK---PHPAIFGTLL-GACR 377
+++ L R+G + EAV+ K M + P F +L+ G CR
Sbjct: 605 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCR 646
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 141/326 (43%), Gaps = 23/326 (7%)
Query: 3 VKSTVTWNSILSAFAKKHG---NFEQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARA 59
V T+NS++ + K+ E + K +PN SY I++ + A
Sbjct: 386 VPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYN 445
Query: 60 FFDRMEVK----DTASWNTMISGYAQVGLMGEASMLFAVMPEKNC----VSWSAMVSGYV 111
+ M +T +N +IS + + + EA +F MP K C ++++++SG
Sbjct: 446 VLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLC 505
Query: 112 ACGDLDAAV----ECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLK----TLV 163
++ A+ + V + +T+ +I +++ G ++ A +L EM + +
Sbjct: 506 EVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEI 565
Query: 164 TWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLV 223
T+N++I G G + LF+ ML G P+ +S ++ G ++ + + +
Sbjct: 566 TYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEM 625
Query: 224 CKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK----DIVSWNAMISGYAQHGAG 279
+ D SLI+ + G +++ +F ++ + D V++N ++S + G
Sbjct: 626 VLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFV 685
Query: 280 EKALHLFDEMRHDGMKPDWITFVAVL 305
A L DE DG P+ T+ +L
Sbjct: 686 YDACLLLDEGIEDGFVPNHRTWSILL 711
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 161/328 (49%), Gaps = 27/328 (8%)
Query: 5 STVTWNSILSAFAKKHGNFEQARQLFEKIP----EPNTVSYNIMLACHLHHFG--VGSAR 58
V +N+I+ + K + + + A LF+++ PN V+Y+ +++C L +G +++
Sbjct: 184 DVVIFNTIIDSLCK-YRHVDDALNLFKEMETKGIRPNVVTYSSLISC-LCSYGRWSDASQ 241
Query: 59 AFFDRMEVK---DTASWNTMISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSGYV 111
D +E K + ++N +I + + G EA L M ++ + +++++++G+
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC 301
Query: 112 ACGDLDAAVECFYAAPVRSVI----TWTAMITGYMKFGRVESAERLFREMSLKTLV---- 163
LD A + F + T+ +I G+ K RVE LFREMS + LV
Sbjct: 302 MHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 361
Query: 164 TWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLV 223
T+ +I G +G ++ K+FK M+ G P+ ++ + +L G N L+ +V +
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421
Query: 224 CKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK----DIVSWNAMISGYAQHGAG 279
KS + D T++I K G + + W+LF + K ++V++N MISG
Sbjct: 422 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 481
Query: 280 EKALHLFDEMRHDGMKPDWITFVAVLLA 307
++A L +M+ DG PD T+ ++ A
Sbjct: 482 QEAYALLKKMKEDGPLPDSGTYNTLIRA 509
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/451 (24%), Positives = 204/451 (45%), Gaps = 32/451 (7%)
Query: 8 TWNSILSAFAKKHGNFEQARQLFEKIP----EPNTVSYNIMLACHLHHFGVGSARAFFDR 63
T+N +++ F ++ A L K+ EP+ V+ + +L + H + A A D+
Sbjct: 47 TYNILINCFCRR-SQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 105
Query: 64 M----EVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNC----VSWSAMVSGYVACGD 115
M DT ++ T+I G EA L M ++ C V++ +V+G GD
Sbjct: 106 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 165
Query: 116 LDAAVECFY---AAPVRS-VITWTAMITGYMKFGRVESAERLFREMSLK----TLVTWNA 167
+D A AA + + V+ + +I K+ V+ A LF+EM K +VT+++
Sbjct: 166 IDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 225
Query: 168 MIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSP 227
+I+ GR D +L M+E PN ++ +++ +++H + K
Sbjct: 226 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS 285
Query: 228 LSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKD----IVSWNAMISGYAQHGAGEKAL 283
+ D SLI+ + L +A ++F + KD + ++N +I G+ + E
Sbjct: 286 IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGT 345
Query: 284 HLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDL 343
LF EM H G+ D +T+ ++ H G D + F MV D G+ Y+ ++D
Sbjct: 346 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDG 404
Query: 344 LGRAGRLPEAV---DLIKSMPFKPHPAIFGTLL-GACRIHKNLDLAE-FAAKNLLELDPS 398
L G+L +A+ D ++ K I+ T++ G C+ K D + F + +L + P+
Sbjct: 405 LCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 464
Query: 399 SATGYVQLANVYAAQNRWEHVARIRRSMKEN 429
T ++ + + + E A +++ MKE+
Sbjct: 465 VVTYNTMISGLCSKRLLQEAYALLKK-MKED 494
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 163/326 (50%), Gaps = 27/326 (8%)
Query: 7 VTWNSILSAFAKKHGNFEQARQLFEKIPE----PNTVSYNIMLACHLHHFG--VGSARAF 60
V +N+I+ K + + + A LF ++ P+ +Y+ +++C L ++G ++R
Sbjct: 259 VIYNTIIDGLCK-YKHMDDALNLFTEMDNKGIRPDVFTYSSLISC-LCNYGRWSDASRLL 316
Query: 61 FDRMEVK---DTASWNTMISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSGYVAC 113
D +E K + +++ +I + + G + EA L+ M ++ + ++S++++G+
Sbjct: 317 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 376
Query: 114 GDLDAAVECFYAAPVR----SVITWTAMITGYMKFGRVESAERLFREMSLKTLV----TW 165
LD A F + +V+T++ +I G+ K RVE LFREMS + LV T+
Sbjct: 377 DRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 436
Query: 166 NAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCK 225
+I G+ + ++ +FK M+ G PN L+ +L G L V + + +
Sbjct: 437 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 496
Query: 226 SPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK----DIVSWNAMISGYAQHGAGEK 281
S + D +I K G +++ WELF + K +++++N MISG+ + G+ E+
Sbjct: 497 STMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEE 556
Query: 282 ALHLFDEMRHDGMKPDWITFVAVLLA 307
A L +M+ DG P+ T+ ++ A
Sbjct: 557 ADSLLKKMKEDGPLPNSGTYNTLIRA 582
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 178/373 (47%), Gaps = 28/373 (7%)
Query: 28 QLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEV----KDTASWNTMISGYAQVG 83
Q+ ++ +P+ V+Y ++ + A + +ME D +NT+I G +
Sbjct: 213 QMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYK 272
Query: 84 LMGEASMLFAVMPEK----NCVSWSAMVSGYVACGDLDAAVECFYAAPVR----SVITWT 135
M +A LF M K + ++S+++S G A R +V+T++
Sbjct: 273 HMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFS 332
Query: 136 AMITGYMKFGRVESAERLFREMSLKTL----VTWNAMIAGYVENGRAEDGLKLFKSMLES 191
A+I ++K G++ AE+L+ EM +++ T++++I G+ + R ++ +F+ M+
Sbjct: 333 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 392
Query: 192 GAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEA 251
PN ++ ++++ G ++ G ++ + + + L +T T+LI + + D A
Sbjct: 393 DCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 452
Query: 252 WELFVQIP----RKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLA 307
+F Q+ +I+++N ++ G ++G KA+ +F+ ++ M+PD T+ ++
Sbjct: 453 QMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEG 512
Query: 308 CNHAGLVDLGVQYF-NMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSM----PF 362
AG V+ G + F N+ ++ G+ Y M+ R G EA L+K M P
Sbjct: 513 MCKAGKVEDGWELFCNLSLK--GVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL 570
Query: 363 KPHPAIFGTLLGA 375
P+ + TL+ A
Sbjct: 571 -PNSGTYNTLIRA 582
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 131/285 (45%), Gaps = 21/285 (7%)
Query: 162 LVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGC----SNLSALQLGK 217
+VT ++++ GY + R D + L M+E G KP+ + T+++ G A+ L
Sbjct: 153 IVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVD 212
Query: 218 QVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPR----KDIVSWNAMISGY 273
Q+ Q C+ L T GT +++ K GD+ A L ++ + D+V +N +I G
Sbjct: 213 QMVQRGCQPDL---VTYGT-VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGL 268
Query: 274 AQHGAGEKALHLFDEMRHDGMKPDWITFVAVL-LACNHAGLVDLGVQYFNMMVRDFGIKT 332
++ + AL+LF EM + G++PD T+ +++ CN+ D +M+ R I
Sbjct: 269 CKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK--INP 326
Query: 333 KPEHYACMVDLLGRAGRLPEAVDLIKSM---PFKPHPAIFGTLLGACRIHKNLDLAEFAA 389
++ ++D + G+L EA L M P + +L+ +H LD A+
Sbjct: 327 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 386
Query: 390 KNLLELD--PSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVV 432
+ ++ D P+ T Y L + R E + R M + +V
Sbjct: 387 ELMISKDCFPNVVT-YSTLIKGFCKAKRVEEGMELFREMSQRGLV 430
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 118/276 (42%), Gaps = 35/276 (12%)
Query: 177 RAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQL----GKQVHQLVCKSPLSSDT 232
+ +D + LF M++S P+ + +L + ++ +L G+Q+ L +S D
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL----GISHDL 118
Query: 233 TAGTSLISMYAKCGDLKEAWELFVQIPR----KDIVSWNAMISGYAQHGAGEKALHLFDE 288
+ I+ + + L A + ++ + DIV+ +++++GY A+ L D+
Sbjct: 119 YTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQ 178
Query: 289 MRHDGMKPDWITFVAVL-------LACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMV 341
M G KPD TF ++ A LVD VQ G + Y +V
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR--------GCQPDLVTYGTVV 230
Query: 342 DLLGRAGRLPEAVDLIKSM---PFKPHPAIFGTLL-GACRIHKNLD--LAEFAAKNLLEL 395
+ L + G + A+ L+K M + I+ T++ G C+ +K++D L F + +
Sbjct: 231 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCK-YKHMDDALNLFTEMDNKGI 289
Query: 396 DPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKV 431
P T Y L + RW +R+ M E K+
Sbjct: 290 RPDVFT-YSSLISCLCNYGRWSDASRLLSDMIERKI 324
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 158/317 (49%), Gaps = 25/317 (7%)
Query: 5 STVTWNSILSAFAKKHGNFEQARQLFEKIPE----PNTVSYNIMLACHLHHFG-VGSARA 59
+ V +++++ + K + + + A LF ++ PN ++Y+ +++C ++ ++R
Sbjct: 259 NVVIYSTVIDSLCK-YRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRL 317
Query: 60 FFDRMEVK---DTASWNTMISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSGYVA 112
D +E K + ++N +I + + G + EA L+ M ++ + ++S++++G+
Sbjct: 318 LSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 377
Query: 113 CGDLDAAVECFYAAPVR----SVITWTAMITGYMKFGRVESAERLFREMSLKTLV----T 164
LD A F + +V+T+ +I G+ K R++ LFREMS + LV T
Sbjct: 378 HDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVT 437
Query: 165 WNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVC 224
+ +I G+ + ++ +FK M+ G PN ++ ++L G L+ V + +
Sbjct: 438 YTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 497
Query: 225 KSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK----DIVSWNAMISGYAQHGAGE 280
+S + +I K G +++ W+LF + K D++ +N MISG+ + G E
Sbjct: 498 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKE 557
Query: 281 KALHLFDEMRHDGMKPD 297
+A LF +MR DG PD
Sbjct: 558 EADALFRKMREDGPLPD 574
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 185/404 (45%), Gaps = 36/404 (8%)
Query: 5 STVTWNSILSAFAKKHGN-FEQARQLFEKIPE----PNTVSYNIMLACHLHHFGVGSARA 59
S VT +S+L+ + HG A L +++ E P+T+++ ++ H A A
Sbjct: 154 SIVTLSSLLNGYC--HGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 211
Query: 60 FFDRMEVK----DTASWNTMISGYAQVGLMGEASMLFAVMP----EKNCVSWSAMVSGYV 111
DRM + + ++ +++G + G + A L M E N V +S ++
Sbjct: 212 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLC 271
Query: 112 ACGDLDAAVECFYAAPVR----SVITWTAMITGYMKFGRVESAERLFREMSLK----TLV 163
D A+ F + +VIT++++I+ + R A RL +M + +V
Sbjct: 272 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVV 331
Query: 164 TWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLV 223
T+NA+I +V+ G+ + KL+ M++ P+ + +S++ G L K + +L+
Sbjct: 332 TFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 391
Query: 224 CKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK----DIVSWNAMISGYAQHGAG 279
+ +LI+ + K + E ELF ++ ++ + V++ +I G+ Q
Sbjct: 392 ISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDC 451
Query: 280 EKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPE--HY 337
+ A +F +M DG+ P+ +T+ +L G ++ + F + R K +P Y
Sbjct: 452 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS---KMEPTIYTY 508
Query: 338 ACMVDLLGRAGRLPEAVDLIKSMPF---KPHPAIFGTLL-GACR 377
M++ + +AG++ + DL S+ KP I+ T++ G CR
Sbjct: 509 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCR 552
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 8 TWNSILSAFAKKHGNFEQARQLFE----KIPEPNTVSYNIMLA--CHLHHF--GVGSARA 59
T++S+++ F H ++A+ +FE K PN V+YN ++ C GV R
Sbjct: 367 TYSSLINGFCM-HDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFRE 425
Query: 60 FFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSGYVACGD 115
R V +T ++ T+I G+ Q A M+F M N ++++ ++ G G
Sbjct: 426 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 485
Query: 116 LDAAVECF-YAAPVR---SVITWTAMITGYMKFGRVESAERLFREMSLK----TLVTWNA 167
L+ A+ F Y + ++ T+ MI G K G+VE LF +SLK ++ +N
Sbjct: 486 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNT 545
Query: 168 MIAGYVENGRAEDGLKLFKSMLESGAKPNA 197
MI+G+ G E+ LF+ M E G P++
Sbjct: 546 MISGFCRKGLKEEADALFRKMREDGPLPDS 575
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 169/375 (45%), Gaps = 53/375 (14%)
Query: 6 TVTWNSILSAFAKKHGNFEQARQLFEKI----PEPNTVSYNIMLACHLHHFGVGSARAFF 61
T + N +L FAK G + ++ F+ + P +YNIM+ C V +AR F
Sbjct: 227 TRSCNGLLHRFAK-LGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLF 285
Query: 62 DRME----VKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLD 117
+ M+ V DT ++N+MI G+ +VG + + F M + C
Sbjct: 286 EEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEP--------------- 330
Query: 118 AAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMS---LK-TLVTWNAMIAGYV 173
VIT+ A+I + KFG++ +REM LK +V+++ ++ +
Sbjct: 331 ------------DVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFC 378
Query: 174 ENGRAEDGLKLFKSMLESGAKPNALSLTSVL-LGCS--NLS-ALQLGKQVHQLVCKSPLS 229
+ G + +K + M G PN + TS++ C NLS A +LG ++ Q+ +
Sbjct: 379 KEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQV----GVE 434
Query: 230 SDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIV----SWNAMISGYAQHGAGEKALHL 285
+ T+LI +KEA ELF ++ ++ S+NA+I G+ + ++AL L
Sbjct: 435 WNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALEL 494
Query: 286 FDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLG 345
+E++ G+KPD + + + ++ N M ++ GIK Y ++D
Sbjct: 495 LNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEM-KECGIKANSLIYTTLMDAYF 553
Query: 346 RAGRLPEAVDLIKSM 360
++G E + L+ M
Sbjct: 554 KSGNPTEGLHLLDEM 568
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 163/378 (43%), Gaps = 52/378 (13%)
Query: 3 VKSTVTWNSILSAFAKKHGNFEQARQLFEKIP----EPNTVSYNIMLACHLHHFGVGSAR 58
V TVT+NS++ F K G + FE++ EP+ ++YN ++ C +
Sbjct: 294 VPDTVTYNSMIDGFGKV-GRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGL 352
Query: 59 AFFDRMEVK----DTASWNTMISGYAQVGLMGEASMLFAVMPEKNCV----SWSAMVSGY 110
F+ M+ + S++T++ + + G+M +A + M V ++++++
Sbjct: 353 EFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAN 412
Query: 111 VACGDLDAAV----ECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMS----LKTL 162
G+L A E +V+T+TA+I G R++ AE LF +M + L
Sbjct: 413 CKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNL 472
Query: 163 VTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQL 222
++NA+I G+V+ + L+L + G KP+ L + + G +L ++ K V
Sbjct: 473 ASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNE 532
Query: 223 VCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKA 282
+ + + +++ T+L+ Y K G+ E
Sbjct: 533 MKECGIKANSLIYTTLMDAYFKSGNPTE-------------------------------G 561
Query: 283 LHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVD 342
LHL DEM+ ++ +TF ++ LV V YFN + DFG++ + M+D
Sbjct: 562 LHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMID 621
Query: 343 LLGRAGRLPEAVDLIKSM 360
L + ++ A L + M
Sbjct: 622 GLCKDNQVEAATTLFEQM 639
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 108/236 (45%), Gaps = 9/236 (3%)
Query: 133 TWTAMITGYMKFGRVESAERLFREMS----LKTLVTWNAMIAGYVENGRAEDGLKLFKSM 188
+ A+ + + G +E A + F +M + N ++ + + G+ +D + FK M
Sbjct: 194 VFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM 253
Query: 189 LESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDL 248
+ +GA+P + ++ ++ + + + + L DT S+I + K G L
Sbjct: 254 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRL 313
Query: 249 KEAWELFVQIP----RKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAV 304
+ F ++ D++++NA+I+ + + G L + EM+ +G+KP+ +++ +
Sbjct: 314 DDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTL 373
Query: 305 LLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSM 360
+ A G++ ++++ M R G+ Y ++D + G L +A L M
Sbjct: 374 VDAFCKEGMMQQAIKFYVDM-RRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM 428
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/376 (20%), Positives = 154/376 (40%), Gaps = 63/376 (16%)
Query: 5 STVTWNSILSAFAKKHGNFEQARQLFEKIPE----PNTVSYNIMLACHLHHFGVGSARAF 60
+ V++++++ AF K+ G +QA + + + PN +Y ++ + + A
Sbjct: 366 NVVSYSTLVDAFCKE-GMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424
Query: 61 FDRMEVKDTASWNT-----MISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSGYV 111
+ M ++ WN +I G M EA LF M N S++A++ G+V
Sbjct: 425 GNEM-LQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFV 483
Query: 112 ACGDLDAAVECFYAAPVRSV----ITWTAMITGYMKFGRVESAERLFREMSLKTL----V 163
++D A+E R + + + I G ++E+A+ + EM + +
Sbjct: 484 KAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSL 543
Query: 164 TWNAMIAGYVENGRAEDGLKLFKSMLE--------------------------------- 190
+ ++ Y ++G +GL L M E
Sbjct: 544 IYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRI 603
Query: 191 ---SGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGD 247
G + NA T+++ G + ++ + + + + L D TA TSL+ K G+
Sbjct: 604 SNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGN 663
Query: 248 LKEAWEL---FVQIPRK-DIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVA 303
+ EA L +I K D++++ +++ G + +KA +EM +G+ PD + ++
Sbjct: 664 VLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCIS 723
Query: 304 VLLACNHAGLVDLGVQ 319
VL G +D V+
Sbjct: 724 VLKKHYELGCIDEAVE 739
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 83/184 (45%), Gaps = 11/184 (5%)
Query: 199 SLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQI 258
+L SVL+ +L L+ Q + + + T + L+ +AK G + F +
Sbjct: 197 ALFSVLI---DLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM 253
Query: 259 ----PRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLV 314
R + ++N MI + G E A LF+EM+ G+ PD +T+ +++ G +
Sbjct: 254 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRL 313
Query: 315 DLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMP---FKPHPAIFGT 371
D V +F M +D + Y +++ + G+LP ++ + M KP+ + T
Sbjct: 314 DDTVCFFEEM-KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 372
Query: 372 LLGA 375
L+ A
Sbjct: 373 LVDA 376
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 181/378 (47%), Gaps = 45/378 (11%)
Query: 8 TWNSILSAFAKKHGNFEQARQLFEKIP----EPNTVSYNIMLACHLHHFGVGSARAFFDR 63
++NS++S F K G + A + +P EP+ +SYN ++ H + + SA +
Sbjct: 58 SFNSVVS-FVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLES 116
Query: 64 MEVK-------DTASWNTMISGYAQVGLMGEASMLFAVMPE---KNCVSWSAMVSGYVAC 113
+ D S+N++ +G++++ ++ E + VM + N V++S + +
Sbjct: 117 LRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKS 176
Query: 114 GDLDAAVECFYA----APVRSVITWTAMITGYMKFGRVESAERLFRE-----MSLKTLVT 164
G+L A++ F++ A +V+T+T +I GY K G +E A L++E MSL +VT
Sbjct: 177 GELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSL-NVVT 235
Query: 165 WNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVL-----LGCSNLSALQLGKQV 219
+ A+I G+ + G + +++ M+E +PN+L T+++ G S+ + L K +
Sbjct: 236 YTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKML 295
Query: 220 HQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVS----WNAMISGYAQ 275
+Q + D TA +IS G LKEA E+ + + D+V + M++ Y +
Sbjct: 296 NQ-----GMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFK 350
Query: 276 HGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPE 335
G + A++++ ++ G +PD + ++ G + + YF + K
Sbjct: 351 SGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIE------KANDV 404
Query: 336 HYACMVDLLGRAGRLPEA 353
Y ++D L + G E
Sbjct: 405 MYTVLIDALCKEGDFIEV 422
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 135/311 (43%), Gaps = 51/311 (16%)
Query: 5 STVTWNSILSAFAKKHGNFEQARQLFEKIPE----PNTVSYNIMLACHLHHFGVGSARAF 60
+ VT+ +++ F KK G ++A +++ ++ E PN++ Y ++ +A F
Sbjct: 232 NVVTYTALIDGFCKK-GEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKF 290
Query: 61 FDRMEVK----DTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVS----WSAMVSGYVA 112
+M + D ++ +ISG G + EA+ + M + + V ++ M++ Y
Sbjct: 291 LAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFK 350
Query: 113 CGDLDAAVECFYAAPVR----SVITWTAMITGYMKFGRVESA------------------ 150
G + AAV ++ R V+ + MI G K G++ A
Sbjct: 351 SGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLI 410
Query: 151 ------------ERLFREMSLKTLV----TWNAMIAGYVENGRAEDGLKLFKSMLESGAK 194
ERLF ++S LV + + IAG + G D KL M++ G
Sbjct: 411 DALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLL 470
Query: 195 PNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWEL 254
+ L+ T+++ G ++ + +QV + S +S D+ LI Y K G++ A +L
Sbjct: 471 LDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDL 530
Query: 255 FVQIPRKDIVS 265
+ + R+ +V+
Sbjct: 531 LLDMQRRGLVT 541
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/332 (19%), Positives = 142/332 (42%), Gaps = 67/332 (20%)
Query: 70 ASWNTMISGYAQVGLMGEASMLFAVMPEKNC----VSWSAMVSGYVACGDLDAAV----- 120
+S+N+++S ++G + A + MP C +S+++++ G+ GD+ +A
Sbjct: 57 SSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLES 116
Query: 121 ----ECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSL------KTLVTWNAMIA 170
F P ++++ ++ G F +++ + +F M + +VT++ I
Sbjct: 117 LRASHGFICKP--DIVSFNSLFNG---FSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWID 171
Query: 171 GYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSS 230
+ ++G + LK F SM PN ++
Sbjct: 172 TFCKSGELQLALKSFHSMKRDALSPNVVTF------------------------------ 201
Query: 231 DTTAGTSLISMYAKCGDLKEAWELFVQIPRK----DIVSWNAMISGYAQHGAGEKALHLF 286
T LI Y K GDL+ A L+ ++ R ++V++ A+I G+ + G ++A ++
Sbjct: 202 -----TCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMY 256
Query: 287 DEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGR 346
M D ++P+ + + ++ G D +++ M+ G++ Y ++ L
Sbjct: 257 SRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQ-GMRLDITAYGVIISGLCG 315
Query: 347 AGRLPEAVDLIKSMP---FKPHPAIFGTLLGA 375
G+L EA ++++ M P IF T++ A
Sbjct: 316 NGKLKEATEIVEDMEKSDLVPDMVIFTTMMNA 347
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/363 (20%), Positives = 163/363 (44%), Gaps = 57/363 (15%)
Query: 5 STVTWNSILSAFAKKHGNFEQARQLFEKIPE----PNTVSYNIMLACHLHHFGVGSARAF 60
+ VT+++ + F K G + A + F + PN V++ ++ + + A +
Sbjct: 162 NVVTYSTWIDTFCKS-GELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSL 220
Query: 61 FDRME-VK---DTASWNTMISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSGYVA 112
+ M V+ + ++ +I G+ + G M A +++ M E N + ++ ++ G+
Sbjct: 221 YKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQ 280
Query: 113 CGDLDAAVECFYAAPVR-----SVITWTAMITGYMKFGRVESAERLFREMS----LKTLV 163
GD D A++ F A + + + +I+G G+++ A + +M + +V
Sbjct: 281 RGDSDNAMK-FLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMV 339
Query: 164 TWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQ--------- 214
+ M+ Y ++GR + + ++ ++E G +P+ ++L++++ G + L
Sbjct: 340 IFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIE 399
Query: 215 -------------LGKQ-----VHQLVCK---SPLSSDTTAGTSLISMYAKCGDLKEAWE 253
L K+ V +L K + L D TS I+ K G+L +A++
Sbjct: 400 KANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFK 459
Query: 254 LFVQIPRK----DIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACN 309
L ++ ++ D++++ +I G A G +A +FDEM + G+ PD F ++ A
Sbjct: 460 LKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYE 519
Query: 310 HAG 312
G
Sbjct: 520 KEG 522
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 166/338 (49%), Gaps = 28/338 (8%)
Query: 5 STVTWNSILSAFAKKHGNFEQARQLFEKIP----EPNTVSYNIMLACHLHHFG--VGSAR 58
+ V +N+I+ + K + + E A LF ++ PN V+YN ++ C L ++G ++R
Sbjct: 257 NVVIFNTIIDSLCK-YRHVEVAVDLFTEMETKGIRPNVVTYNSLINC-LCNYGRWSDASR 314
Query: 59 AFFDRMEVK---DTASWNTMISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSGYV 111
+ +E K + ++N +I + + G + EA L M ++ + ++++ +++G+
Sbjct: 315 LLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFC 374
Query: 112 ACGDLDAAVECFYAAPVRSVI----TWTAMITGYMKFGRVESAERLFREMSLKTLV---- 163
LD A + F + + T+ +I G+ K RVE LFREMS + LV
Sbjct: 375 MHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTV 434
Query: 164 TWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLV 223
T+ +I G+ + G + +FK M+ + + ++ + +L G + L + + +
Sbjct: 435 TYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYL 494
Query: 224 CKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK-DIVSWNAMISGYAQHGAGEKA 282
KS + + ++I K G + EAW+LF + K D+V++N MISG ++A
Sbjct: 495 QKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEA 554
Query: 283 LHLFDEMRHDGMKPDWITFVAVLLA----CNHAGLVDL 316
LF +M+ DG P+ T+ ++ A C+ A +L
Sbjct: 555 DDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAEL 592
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 170/370 (45%), Gaps = 22/370 (5%)
Query: 28 QLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVK----DTASWNTMISGYAQVG 83
Q+ E +P+T ++ ++ H A A D+M + D ++ T+++G + G
Sbjct: 178 QMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG 237
Query: 84 LMGEASMLFAVMP----EKNCVSWSAMVSGYVACGDLDAAVECFYAAPVR----SVITWT 135
+ A L M + N V ++ ++ ++ AV+ F + +V+T+
Sbjct: 238 DIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYN 297
Query: 136 AMITGYMKFGRVESAERLFREMSLK----TLVTWNAMIAGYVENGRAEDGLKLFKSMLES 191
++I +GR A RL M K +VT+NA+I + + G+ + KL + M++
Sbjct: 298 SLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR 357
Query: 192 GAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEA 251
P+ ++ ++ G + L KQ+ + + + +LI+ + KC +++
Sbjct: 358 SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDG 417
Query: 252 WELFVQIPRK----DIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLA 307
ELF ++ ++ + V++ +I G+ Q G + A +F +M + + D +T+ +L
Sbjct: 418 VELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHG 477
Query: 308 CNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKPHPA 367
G +D + F + + ++ Y M++ + +AG++ EA DL S+ KP
Sbjct: 478 LCSYGKLDTALVIFKYLQKS-EMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVV 536
Query: 368 IFGTLL-GAC 376
+ T++ G C
Sbjct: 537 TYNTMISGLC 546
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 129/285 (45%), Gaps = 21/285 (7%)
Query: 162 LVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGC----SNLSALQLGK 217
+VT ++++ GY + R D + L M+E G KP+ + T+++ G A+ L
Sbjct: 153 IVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVD 212
Query: 218 QVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIP----RKDIVSWNAMISGY 273
Q+ Q C+ L T GT +++ K GD+ A L ++ + ++V +N +I
Sbjct: 213 QMVQRGCQPDL---VTYGT-VVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSL 268
Query: 274 AQHGAGEKALHLFDEMRHDGMKPDWITFVAVL-LACNHAGLVDLGVQYFNMMVRDFGIKT 332
++ E A+ LF EM G++P+ +T+ +++ CN+ D NM+ + I
Sbjct: 269 CKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKK--INP 326
Query: 333 KPEHYACMVDLLGRAGRLPEAVDLIKSM---PFKPHPAIFGTLLGACRIHKNLDLAEFAA 389
+ ++D + G+L EA L + M P + L+ +H LD A+
Sbjct: 327 NVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMF 386
Query: 390 KNLLELD--PSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVV 432
K ++ D P+ T Y L N + R E + R M + +V
Sbjct: 387 KFMVSKDCLPNIQT-YNTLINGFCKCKRVEDGVELFREMSQRGLV 430
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 119/275 (43%), Gaps = 33/275 (12%)
Query: 177 RAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQL----GKQVHQLVCKSPLSSDT 232
+ +D + LF M++S P+ + +L + ++ +L G+Q+ L +S D
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL----GISHDL 118
Query: 233 TAGTSLISMYAKCGDLKEAWELFVQIPR----KDIVSWNAMISGYAQHGAGEKALHLFDE 288
+ I+ + + L A + ++ + DIV+ +++++GY A+ L D+
Sbjct: 119 YTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQ 178
Query: 289 MRHDGMKPDWITFVAVL-------LACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMV 341
M G KPD TF ++ A LVD VQ G + Y +V
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR--------GCQPDLVTYGTVV 230
Query: 342 DLLGRAGRLPEAVDLIKSMP---FKPHPAIFGTLLGACRIHKNLDLAE--FAAKNLLELD 396
+ L + G + A++L+ M K + IF T++ + ++++++A F +
Sbjct: 231 NGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIR 290
Query: 397 PSSATGYVQLANVYAAQNRWEHVARIRRSMKENKV 431
P+ T Y L N RW +R+ +M E K+
Sbjct: 291 PNVVT-YNSLINCLCNYGRWSDASRLLSNMLEKKI 324
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 167/360 (46%), Gaps = 44/360 (12%)
Query: 8 TWNSILSAFAKKHGNFEQARQLFEKIPE----PNTVSYNIMLACHLHHFG-VGSARAFFD 62
++N ++ + K+ G F+ A + +++ P T +YNI + C L FG + AR
Sbjct: 310 SFNPLIEGYCKQ-GLFDDAWGVTDEMLNAGIYPTTSTYNIYI-CALCDFGRIDDARELLS 367
Query: 63 RMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVEC 122
M D S+NT++ GY ++G EAS+LF + GD+
Sbjct: 368 SMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDL----------------RAGDIHP---- 407
Query: 123 FYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTL----VTWNAMIAGYVENGRA 178
S++T+ +I G + G +E A+RL EM+ + + +T+ ++ G+V+NG
Sbjct: 408 -------SIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNL 460
Query: 179 EDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVH-QLVCKSPLSSDTTAGTS 237
+++ ML G KP+ + T+ +G L ++H ++V + D T
Sbjct: 461 SMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNV 520
Query: 238 LISMYAKCGDLKEAWELFVQIPR----KDIVSWNAMISGYAQHGAGEKALHLFDEMRHDG 293
I K G+L +A E +I R D V++ +I GY ++G + A +L+DEM
Sbjct: 521 RIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKR 580
Query: 294 MKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEA 353
+ P IT+ ++ AG ++ QY M + G++ + ++ + +AG + EA
Sbjct: 581 LYPSVITYFVLIYGHAKAGRLEQAFQYSTEM-KKRGVRPNVMTHNALLYGMCKAGNIDEA 639
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 96/466 (20%), Positives = 185/466 (39%), Gaps = 72/466 (15%)
Query: 36 PNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDT----ASWNTMISGYAQVGLMGEASML 91
P +++N ML + + M+ ++ ++N +I+G+++ G M EA
Sbjct: 236 PTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRF 295
Query: 92 --------FAVMPEKNCVSWSAMVSGYVACGDLDAA----VECFYAAPVRSVITWTAMIT 139
FAV P S++ ++ GY G D A E A + T+ I
Sbjct: 296 HGDMRRSGFAVTP----YSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYIC 351
Query: 140 GYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALS 199
FGR++ A L M+ +V++N ++ GY++ G+ + LF + P+ ++
Sbjct: 352 ALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVT 411
Query: 200 LTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIP 259
+++ G L+ +++ + + + D T+L+ + K G+L A E++ ++
Sbjct: 412 YNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEML 471
Query: 260 RK----------------------------------------DIVSWNAMISGYAQHGAG 279
RK D+ +N I G + G
Sbjct: 472 RKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNL 531
Query: 280 EKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYAC 339
KA+ ++ G+ PD +T+ V+ G + ++ M+R + P
Sbjct: 532 VKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRK---RLYPSVITY 588
Query: 340 MVDLLG--RAGRLPEAVDL---IKSMPFKPHPAIFGTLL-GACRIHKNLDLA-EFAAKNL 392
V + G +AGRL +A +K +P+ LL G C+ N+D A + K
Sbjct: 589 FVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKA-GNIDEAYRYLCKME 647
Query: 393 LELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAPGYS 438
E P + Y L + +WE V ++ + M + K ++ GY+
Sbjct: 648 EEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLD-KEIEPDGYT 692
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 113/266 (42%), Gaps = 19/266 (7%)
Query: 172 YVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSD 231
Y + AE L F+ M+ G P+ + VL + + V++ + + +
Sbjct: 178 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPT 237
Query: 232 TTAGTSLISMYAKCGDLKEAWELFVQIPRKDI----VSWNAMISGYAQHGAGEKALHLFD 287
+++ K GDL+ ++++++ R++I V++N +I+G++++G E+A
Sbjct: 238 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHG 297
Query: 288 EMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRA 347
+MR G +F ++ GL D + M+ + GI Y + L
Sbjct: 298 DMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEML-NAGIYPTTSTYNIYICALCDF 356
Query: 348 GRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLL-------ELDPSSA 400
GR+ +A +L+ SM P + TL+ H + + +F +LL ++ PS
Sbjct: 357 GRIDDARELLSSMA-APDVVSYNTLM-----HGYIKMGKFVEASLLFDDLRAGDIHPSIV 410
Query: 401 TGYVQLANVYAAQNRWEHVARIRRSM 426
T Y L + E R++ M
Sbjct: 411 T-YNTLIDGLCESGNLEGAQRLKEEM 435
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 178/395 (45%), Gaps = 26/395 (6%)
Query: 3 VKSTVTWNSILSAFAKKHGNFEQARQLFEKIP-EPNTVSYNIMLACHLHHFGVGSARAFF 61
V +T+N ++S + K G A + +++ P+ V+YN +L + A
Sbjct: 169 VPDVITYNVMISGYCKA-GEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVL 227
Query: 62 DRMEVKD----TASWNTMISGYAQVGLMGEASMLFAVMPEKNC----VSWSAMVSGYVAC 113
DRM +D ++ +I + +G A L M ++ C V+++ +V+G
Sbjct: 228 DRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 287
Query: 114 GDLDAAVECFYAAPVR----SVITWTAMITGYMKFGRVESAERLFREMSLK----TLVTW 165
G LD A++ P +VIT ++ GR AE+L +M K ++VT+
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347
Query: 166 NAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCK 225
N +I G + + + M + G +PN+LS +L G + + + +
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 407
Query: 226 SPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKD----IVSWNAMISGYAQHGAGEK 281
D ++++ K G +++A E+ Q+ K ++++N +I G A+ G K
Sbjct: 408 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK 467
Query: 282 ALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMV 341
A+ L DEMR +KPD IT+ +++ + G VD +++F+ R GI+ + ++
Sbjct: 468 AIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFER-MGIRPNAVTFNSIM 526
Query: 342 DLLGRAGRLPEAVDLIKSM---PFKPHPAIFGTLL 373
L ++ + A+D + M KP+ + L+
Sbjct: 527 LGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILI 561
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 151/337 (44%), Gaps = 19/337 (5%)
Query: 66 VKDTASWNTMISGYAQVGLMGEA-SMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFY 124
V D ++N MISGY + G + A S+L + + V+++ ++ G L A+E
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 125 AAPVRS----VITWTAMITGYMKFGRVESAERLFREMSLK----TLVTWNAMIAGYVENG 176
R VIT+T +I + V A +L EM + +VT+N ++ G + G
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288
Query: 177 RAEDGLKLFKSMLESGAKPNALSLTSVLLG-CSNLSALQLGKQVHQLVCKSPLSSDTTAG 235
R ++ +K M SG +PN ++ +L CS + K + ++ K S
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG-FSPSVVTF 347
Query: 236 TSLISMYAKCGDLKEAWELFVQIPR----KDIVSWNAMISGYAQHGAGEKALHLFDEMRH 291
LI+ + G L A ++ ++P+ + +S+N ++ G+ + ++A+ + M
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 407
Query: 292 DGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLL---GRAG 348
G PD +T+ +L A G V+ V+ N + G Y ++D L G+ G
Sbjct: 408 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK-GCSPVLITYNTVIDGLAKAGKTG 466
Query: 349 RLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLA 385
+ + +D +++ KP + +L+G +D A
Sbjct: 467 KAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 126/282 (44%), Gaps = 33/282 (11%)
Query: 124 YAAPVRSVITWTAMITGYMKFGRVESAERLFREM----SLKTLVTWNAMIAGYVENGRAE 179
Y V +I T +I G+ + G+ A ++ + ++ ++T+N MI+GY + G
Sbjct: 130 YHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEIN 189
Query: 180 DGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLI 239
+ L + M P+ ++ ++L + L+ +V + + D T LI
Sbjct: 190 NALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILI 246
Query: 240 SMYAKCGDLKEAWELFVQIPRK----DIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMK 295
+ + A +L ++ + D+V++N +++G + G ++A+ ++M G +
Sbjct: 247 EATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQ 306
Query: 296 PDWITFVAVLLACNHAG--------LVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRA 347
P+ IT +L + G L D+ + F+ V F I +++ L R
Sbjct: 307 PNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI---------LINFLCRK 357
Query: 348 GRLPEAVDLIKSMP---FKPHPAIFGTLL-GACRIHKNLDLA 385
G L A+D+++ MP +P+ + LL G C+ K +D A
Sbjct: 358 GLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCK-EKKMDRA 398
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 108/222 (48%), Gaps = 21/222 (9%)
Query: 5 STVTWNSILSAFAKKHGNFEQARQLFEKIPE----PNTVSYNIMLACHLHHFGVGSARAF 60
S VT+N IL F + G +A + EK+P+ PN++SYN +L + A +
Sbjct: 343 SVVTFN-ILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEY 401
Query: 61 FDRMEVK----DTASWNTMISGYAQVGLMGEASMLFAVMPEKNC----VSWSAMVSGYVA 112
+RM + D ++NTM++ + G + +A + + K C ++++ ++ G
Sbjct: 402 LERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAK 461
Query: 113 CGDLDAAVECFYAAPVRSV----ITWTAMITGYMKFGRVESAERLFRE---MSLK-TLVT 164
G A++ + + IT+++++ G + G+V+ A + F E M ++ VT
Sbjct: 462 AGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVT 521
Query: 165 WNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLG 206
+N+++ G ++ + + + M+ G KPN S T ++ G
Sbjct: 522 FNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEG 563
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 93/201 (46%), Gaps = 4/201 (1%)
Query: 163 VTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQL 222
V N + V G E+G K ++M+ G P+ + T+++ G L + ++ ++
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162
Query: 223 VCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIP-RKDIVSWNAMISGYAQHGAGEK 281
+ S D +IS Y K G++ A + ++ D+V++N ++ G ++
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQ 222
Query: 282 ALHLFDEMRHDGMKPDWITFVAVLLA-CNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACM 340
A+ + D M PD IT+ ++ A C +G V ++ + M RD G Y +
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSG-VGHAMKLLDEM-RDRGCTPDVVTYNVL 280
Query: 341 VDLLGRAGRLPEAVDLIKSMP 361
V+ + + GRL EA+ + MP
Sbjct: 281 VNGICKEGRLDEAIKFLNDMP 301
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/454 (23%), Positives = 199/454 (43%), Gaps = 46/454 (10%)
Query: 9 WNSILSAFAKKHGNFEQARQLFEKIPE----PNTVSYNIMLACHLHHFGVGSARAFFDRM 64
+N+++ + K F +A LF+++ + PN V+Y+I++ + +A +F
Sbjct: 370 YNALIDSLCKGR-KFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLG-- 426
Query: 65 EVKDTA------SWNTMISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSGYVACG 114
E+ DT +N++I+G+ + G + A A M K V++++++ GY + G
Sbjct: 427 EMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKG 486
Query: 115 DLDAAVECFYA------APVRSVITWTAMITGYMKFGRVESAERLFREMS----LKTLVT 164
++ A+ ++ AP S+ T+T +++G + G + A +LF EM+ VT
Sbjct: 487 KINKALRLYHEMTGKGIAP--SIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVT 544
Query: 165 WNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVC 224
+N MI GY E G + K M E G P+ S ++ G K +
Sbjct: 545 YNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLH 604
Query: 225 KSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK----DIVSWNAMISGYAQHGAGE 280
K + T L+ + + G L+EA + ++ ++ D+V + +I G +H +
Sbjct: 605 KGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRK 664
Query: 281 KALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACM 340
L EM G+KPD + + +++ A + G +++M+ + G Y +
Sbjct: 665 LFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINE-GCVPNEVTYTAV 723
Query: 341 VDLLGRAGRLPEAVDLIKSM-PFK--PHPAIFGTLL-----GACRIHKNLDLAEFAAKNL 392
++ L +AG + EA L M P P+ +G L G + K ++L K L
Sbjct: 724 INGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGL 783
Query: 393 LELDPSSATGYVQLANVYAAQNRWEHVARIRRSM 426
L ++ Y L + Q R E + + M
Sbjct: 784 L----ANTATYNMLIRGFCRQGRIEEASELITRM 813
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 158/382 (41%), Gaps = 62/382 (16%)
Query: 5 STVTWNSILSAFAKKHGNFEQARQLFEKIPE----PNTVSYNIMLACHLHHFGVGSARAF 60
S T+ ++LS + G A +LF ++ E PN V+YN+M+ + + A F
Sbjct: 506 SIYTFTTLLSGLFRA-GLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEF 564
Query: 61 FDRME----VKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNC----VSWSAMVSGYVA 112
M V DT S+ +I G G EA + + + NC + ++ ++ G+
Sbjct: 565 LKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCR 624
Query: 113 CGDLDAAVECFYAAPVRSV----ITWTAMITGYMKFGRVESAERLFREMSLKTL----VT 164
G L+ A+ R V + + +I G +K + L +EM + L V
Sbjct: 625 EGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVI 684
Query: 165 WNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLG-------------CSNLS 211
+ +MI + G ++ ++ M+ G PN ++ T+V+ G CS +
Sbjct: 685 YTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQ 744
Query: 212 A-----------------------LQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDL 248
+Q ++H + K L++ T LI + + G +
Sbjct: 745 PVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNM-LIRGFCRQGRI 803
Query: 249 KEAWELFVQI----PRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAV 304
+EA EL ++ D +++ MI+ + +KA+ L++ M G++PD + + +
Sbjct: 804 EEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTL 863
Query: 305 LLACNHAGLVDLGVQYFNMMVR 326
+ C AG + + N M+R
Sbjct: 864 IHGCCVAGEMGKATELRNEMLR 885
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 132/314 (42%), Gaps = 21/314 (6%)
Query: 68 DTASWNTMISGYAQVGLMGEASMLFAVMPEKN----CVSWSAMVSGYVACGDLDAAVE-- 121
+ +N +I G + + EA + + K+ V++ +V G + + +E
Sbjct: 261 NIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMM 320
Query: 122 ----CFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMS----LKTLVTWNAMIAGYV 173
C +P + ++ +++ G K G++E A L + + L +NA+I
Sbjct: 321 DEMLCLRFSPSEAAVS--SLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLC 378
Query: 174 ENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTT 233
+ + + LF M + G +PN ++ + ++ L + + L
Sbjct: 379 KGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVY 438
Query: 234 AGTSLISMYAKCGDLKEAWELFVQIPRKD----IVSWNAMISGYAQHGAGEKALHLFDEM 289
SLI+ + K GD+ A ++ K +V++ +++ GY G KAL L+ EM
Sbjct: 439 PYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEM 498
Query: 290 RHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGR 349
G+ P TF +L AGL+ V+ FN M ++ +K Y M++ G
Sbjct: 499 TGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMA-EWNVKPNRVTYNVMIEGYCEEGD 557
Query: 350 LPEAVDLIKSMPFK 363
+ +A + +K M K
Sbjct: 558 MSKAFEFLKEMTEK 571
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 133/316 (42%), Gaps = 62/316 (19%)
Query: 7 VTWNSILSAFAKKHGNFEQA----RQLFEKIPEPNTVSYNIMLACHLHH----FGVGSAR 58
+ + +L F ++ G E+A +++ ++ + + V Y +++ L H G +
Sbjct: 613 ICYTGLLHGFCRE-GKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLK 671
Query: 59 AFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCV----SWSAMVSGYVACG 114
DR D + +MI ++ G EA ++ +M + CV +++A+++G G
Sbjct: 672 EMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAG 731
Query: 115 DL-DAAVECFYAAPVRSV---ITWTAMITGYMKFGRVESAERL-FREMSLKTLV----TW 165
+ +A V C PV SV +T+ + K G V+ + + LK L+ T+
Sbjct: 732 FVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEVDMQKAVELHNAILKGLLANTATY 790
Query: 166 NAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCK 225
N +I G+ GR E+ +L M+ G P+ ++
Sbjct: 791 NMLIRGFCRQGRIEEASELITRMIGDGVSPDCITY------------------------- 825
Query: 226 SPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIP----RKDIVSWNAMISGYAQHGAGEK 281
T++I+ + D+K+A EL+ + R D V++N +I G G K
Sbjct: 826 ----------TTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGK 875
Query: 282 ALHLFDEMRHDGMKPD 297
A L +EM G+ P+
Sbjct: 876 ATELRNEMLRQGLIPN 891
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 101/224 (45%), Gaps = 11/224 (4%)
Query: 154 FREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSML-ESGAKPNALSLTSVLLGCSNLSA 212
+ + L + +++ +I YV + R DG+ +FK M+ + P +L+++L G
Sbjct: 148 YEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRH 207
Query: 213 LQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK----DIVSWNA 268
L ++ + + D T +I + DL A E+ + +IV +N
Sbjct: 208 FGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNV 267
Query: 269 MISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDF 328
+I G + +A+ + ++ +KPD +T+ ++ ++G++ MM
Sbjct: 268 LIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLE---MMDEML 324
Query: 329 GIKTKPEHYAC--MVDLLGRAGRLPEAVDLIKS-MPFKPHPAIF 369
++ P A +V+ L + G++ EA++L+K + F P +F
Sbjct: 325 CLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLF 368
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 177/385 (45%), Gaps = 27/385 (7%)
Query: 5 STVTWNSILSAFAKKHGNFEQARQLFEKIPE----PNTVSYNIMLACHLHHFGVGSARAF 60
S +T+ ++++A ++ +F L K+ + P+T+ +N ++ + A
Sbjct: 353 SLITYTTLVTALTRQK-HFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKI 411
Query: 61 FDRME---VKDTAS-WNTMISGYAQVGLMGEAS-----MLFAVMPEKNCVSWSAMVSGYV 111
F++M+ K TAS +NT+I GY ++G + E+S ML M + N + + +V +
Sbjct: 412 FEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWC 471
Query: 112 ACGDLDAAVECFYAAPV----RSVITWTAMITGYMKFGRVESAE-----RLFREMSLKTL 162
++ A Y V+T+ + Y + G +AE R+ +
Sbjct: 472 NQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNV 531
Query: 163 VTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQL 222
T ++ GY E G+ E+ L+ F M E G PN S++ G N++ + +V L
Sbjct: 532 RTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDL 591
Query: 223 VCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPR----KDIVSWNAMISGYAQHGA 278
+ + + D ++L++ ++ GD+K E++ + DI +++ + GYA+ G
Sbjct: 592 MEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGE 651
Query: 279 GEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYA 338
EKA + ++MR G++P+ + + ++ AG + +Q + M G+ Y
Sbjct: 652 PEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYE 711
Query: 339 CMVDLLGRAGRLPEAVDLIKSMPFK 363
++ G A + +A +L+K M K
Sbjct: 712 TLIWGFGEAKQPWKAEELLKDMEGK 736
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 141/318 (44%), Gaps = 25/318 (7%)
Query: 130 SVITWTAMITGYMKFGRVESAERLFREMSLKTL----VTWNAMIAGYVENGRAEDGLKLF 185
S+IT+T ++T + S L ++ L + +NA+I E+G + +K+F
Sbjct: 353 SLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIF 412
Query: 186 KSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSP-LSSDTTAGTSLISMYAK 244
+ M ESG KP A + +++ G + L+ ++ ++ + L + L+ +
Sbjct: 413 EKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCN 472
Query: 245 CGDLKEAWELFVQIP----RKDIVSWNAMISGYAQHGAGEKALHLF-DEMRHDGMKPDWI 299
++EAW + ++ + D+V++N + YA+ G+ A + M H+ +KP+
Sbjct: 473 QRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVR 532
Query: 300 TFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMV-------DLLGRAGRLPE 352
T ++ G ++ +++F M ++ G+ + ++ D+ G + E
Sbjct: 533 TCGTIVNGYCEEGKMEEALRFFYRM-KELGVHPNLFVFNSLIKGFLNINDMDG----VGE 587
Query: 353 AVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLE--LDPSSATGYVQLANVY 410
VDL++ KP F TL+ A ++ E ++LE +DP + LA Y
Sbjct: 588 VVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDP-DIHAFSILAKGY 646
Query: 411 AAQNRWEHVARIRRSMKE 428
A E +I M++
Sbjct: 647 ARAGEPEKAEQILNQMRK 664
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 119/282 (42%), Gaps = 31/282 (10%)
Query: 106 MVSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLF----REMSLKT 161
+ SG CGD VRS T ++ G ++ GR + A +F E +
Sbjct: 309 ICSGGTTCGD------------VRS---RTKLMNGLIERGRPQEAHSIFNTLIEEGHKPS 353
Query: 162 LVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQ 221
L+T+ ++ L L + ++G KP+ + +++ S L ++ +
Sbjct: 354 LITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFE 413
Query: 222 LVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIV-----SWNAMISGYAQH 276
+ +S + +LI Y K G L+E+ L + R +++ + N ++ +
Sbjct: 414 KMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQ 473
Query: 277 GAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEH 336
E+A ++ +M+ G+KPD +TF LA +A + ++ R K KP
Sbjct: 474 RKIEEAWNIVYKMQSYGVKPDVVTFNT--LAKAYARIGSTCTAEDMIIPRMLHNKVKPNV 531
Query: 337 YAC--MVDLLGRAGRLPEAVDL---IKSMPFKPHPAIFGTLL 373
C +V+ G++ EA+ +K + P+ +F +L+
Sbjct: 532 RTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLI 573
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 163/340 (47%), Gaps = 32/340 (9%)
Query: 5 STVTWNSILSAFAKKHGN-FEQARQLFEKIPE----PNTVSYNIMLACHLHHFGVGSARA 59
S VT S+L+ F + GN F++A L + + PN V YN ++ + + +A
Sbjct: 148 SIVTLGSLLNGFCQ--GNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALE 205
Query: 60 FFDRMEVK----DTASWNTMISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSGYV 111
F ME K D ++NT+ISG + G +A+ L M ++ N + ++A++ +V
Sbjct: 206 VFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFV 265
Query: 112 ACGDLDAAVECFYAAPVRSVI----TWTAMITGYMKFGRVESAERLFREMSLK----TLV 163
G+L A + RSV+ T+ ++I G+ G + A+ +F M K +V
Sbjct: 266 KEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVV 325
Query: 164 TWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLV 223
T+N +I G+ ++ R EDG+KLF M G +A + +++ G L + ++V +
Sbjct: 326 TYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRM 385
Query: 224 CKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK----DIVSWNAMISGYAQHGAG 279
+S D L+ G +++A + + + DI+++N +I G +
Sbjct: 386 VDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKL 445
Query: 280 EKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQ 319
++A LF + G+KPD I ++ ++ +GL G+Q
Sbjct: 446 KEAWCLFRSLTRKGVKPDAIAYITMI-----SGLCRKGLQ 480
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 140/307 (45%), Gaps = 46/307 (14%)
Query: 7 VTWNSILSAFAKKHGNFEQA----RQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFD 62
VT+N+++S + G + A R + ++ +PN + + ++ + + AR +
Sbjct: 220 VTYNTLISGLSNS-GRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYK 278
Query: 63 RM----EVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDA 118
M V + ++N++I+G+ G +G+A +F +M K C
Sbjct: 279 EMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFP---------------- 322
Query: 119 AVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLV----TWNAMIAGYVE 174
V+T+ +ITG+ K RVE +LF EM+ + LV T+N +I GY +
Sbjct: 323 -----------DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQ 371
Query: 175 NGRAEDGLKLFKSMLESGAKPNALSLTSVLLGC-SNLSALQLGKQVHQLVCKSPLSSDTT 233
G+ K+F M++ G P+ ++ ++LL C N ++ + + + KS + D
Sbjct: 372 AGKLNVAQKVFNRMVDCGVSPDIVTY-NILLDCLCNNGKIEKALVMVEDLQKSEMDVDII 430
Query: 234 AGTSLISMYAKCGDLKEAWELFVQIPRK----DIVSWNAMISGYAQHGAGEKALHLFDEM 289
+I + LKEAW LF + RK D +++ MISG + G +A L M
Sbjct: 431 TYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRM 490
Query: 290 RHDGMKP 296
+ DG P
Sbjct: 491 KEDGFMP 497
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 135/308 (43%), Gaps = 54/308 (17%)
Query: 70 ASWNTMISGYAQVGLMGEASML------FAVMPEKNCVSWSAMVSGYVACGDLDAAVECF 123
+ ++++G+ Q EA L F +P N V ++ +++G DL+ A+E F
Sbjct: 150 VTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVP--NVVIYNTVINGLCKNRDLNNALEVF 207
Query: 124 YAAPVRSV----ITWTAMITGYMKFGRVESAERLFREMSLK----TLVTWNAMIAGYVEN 175
Y + + +T+ +I+G GR A RL R+M + ++ + A+I +V+
Sbjct: 208 YCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKE 267
Query: 176 GRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAG 235
G + L+K M+ PN + S++ G
Sbjct: 268 GNLLEARNLYKEMIRRSVVPNVFTYNSLING----------------------------- 298
Query: 236 TSLISMYAKCGDLKEAWELFVQ---IPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHD 292
++ GD K ++L V P D+V++N +I+G+ + E + LF EM +
Sbjct: 299 ---FCIHGCLGDAKYMFDLMVSKGCFP--DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQ 353
Query: 293 GMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPE 352
G+ D T+ ++ AG +++ + FN MV D G+ Y ++D L G++ +
Sbjct: 354 GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMV-DCGVSPDIVTYNILLDCLCNNGKIEK 412
Query: 353 AVDLIKSM 360
A+ +++ +
Sbjct: 413 ALVMVEDL 420
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 105/247 (42%), Gaps = 56/247 (22%)
Query: 5 STVTWNSILSAFAKKHGNFEQARQLFEKIPE----PNTVSYNIMLACHLHHFGVGSARAF 60
+ + + +++ F K+ GN +AR L++++ PN +YN ++ H +G A+
Sbjct: 253 NVIFFTALIDTFVKE-GNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYM 311
Query: 61 FDRMEVK----DTASWNTMISGYAQVGLMGEASMLFAVMPEKNCV----SWSAMVSGYVA 112
FD M K D ++NT+I+G+ + + + LF M + V +++ ++ GY
Sbjct: 312 FDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQ 371
Query: 113 CGDLDAA-------VECFYAAPVRS--------------------------------VIT 133
G L+ A V+C + + + +IT
Sbjct: 372 AGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIIT 431
Query: 134 WTAMITGYMKFGRVESAERLFREMSLKTL----VTWNAMIAGYVENGRAEDGLKLFKSML 189
+ +I G + +++ A LFR ++ K + + + MI+G G + KL + M
Sbjct: 432 YNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMK 491
Query: 190 ESGAKPN 196
E G P+
Sbjct: 492 EDGFMPS 498
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 162/332 (48%), Gaps = 31/332 (9%)
Query: 7 VTWNSILSAFAKKHGNFEQARQLFEKIP----EPNTVSYNIMLA--CHLHHFGVGSA--R 58
V ++ I+ K G+ + A LF ++ + + ++YN ++ C+ + G+ R
Sbjct: 264 VKYSIIIDGLCK-DGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLR 322
Query: 59 AFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSGYVACG 114
R + +++ +I + + G + EA L M ++ N +++++++ G+
Sbjct: 323 DMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKEN 382
Query: 115 DLDAAVECFYAAPVR----SVITWTAMITGYMKFGRVESAERLFREMSLKTL----VTWN 166
L+ A++ + ++T+ +I GY K R++ LFREMSL+ + VT+N
Sbjct: 383 RLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYN 442
Query: 167 AMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKS 226
++ G+ ++G+ E KLF+ M+ +P+ +S +L G + L+ ++ + KS
Sbjct: 443 TLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKS 502
Query: 227 PLSSDTTAGTSLISMYAKCGDLK--EAWELFVQIPRK----DIVSWNAMISGYAQHGAGE 280
+ D G +I ++ C K +AW+LF +P K D ++N MIS + +
Sbjct: 503 KMELDI--GIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLS 560
Query: 281 KALHLFDEMRHDGMKPDWITFVAVLLACNHAG 312
KA LF +M +G PD +T+ ++ A H G
Sbjct: 561 KADILFRKMTEEGHAPDELTYNILIRA--HLG 590
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 180/413 (43%), Gaps = 55/413 (13%)
Query: 7 VTWNSILSAFAKKHGNFEQARQLFEKIPEPN----TVSYNIMLACHLHHFGVGSARAFFD 62
VT+ +L+ K G A +L K+ E N V Y+I++ + +A F+
Sbjct: 229 VTYGPVLNVMCK-SGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFN 287
Query: 63 RMEVK----DTASWNTMISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSGYVACG 114
ME+K D ++NT+I G+ G + + L M ++ N V++S ++ +V G
Sbjct: 288 EMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEG 347
Query: 115 DLDAAVECFYAAPVRSV----ITWTAMITGYMKFGRVESAERLFREMSLK----TLVTWN 166
L A + R + IT+ ++I G+ K R+E A ++ M K ++T+N
Sbjct: 348 KLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFN 407
Query: 167 AMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKS 226
+I GY + R +DGL+LF+ M G N ++ +++ G L++ K++ Q
Sbjct: 408 ILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQ----- 462
Query: 227 PLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLF 286
E+ + R DIVS+ ++ G +G EKAL +F
Sbjct: 463 --------------------------EMVSRRVRPDIVSYKILLDGLCDNGELEKALEIF 496
Query: 287 DEMRHDGMKPDWITFVAVLLA-CNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLG 345
++ M+ D ++ ++ CN + + D + ++ ++ G+K Y M+ L
Sbjct: 497 GKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLK--GVKLDARAYNIMISELC 554
Query: 346 RAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPS 398
R L +A L + M + H T R H D A AA+ + E+ S
Sbjct: 555 RKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSS 607
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 152/356 (42%), Gaps = 61/356 (17%)
Query: 130 SVITWTAMITGYMKFGRVESAERLFR---EMSLK-TLVTWNAMIAGYVENGRAEDGLKLF 185
+ + ++ G RV A L EM K TL+T N ++ G NG+ D + L
Sbjct: 157 DTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLI 216
Query: 186 KSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKC 245
M+E+G +PN ++ VL ++CKS G + ++M
Sbjct: 217 DRMVETGFQPNEVTYGPVL----------------NVMCKS--------GQTALAMEL-- 250
Query: 246 GDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVL 305
L++ E +++ D V ++ +I G + G+ + A +LF+EM G K D IT+ ++
Sbjct: 251 --LRKMEERNIKL---DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305
Query: 306 LACNHAGLVDLGVQYFNMMVRDFGIKTKPE--HYACMVDLLGRAGRLPEAVDLIKSM--- 360
+AG D G + M++ K P ++ ++D + G+L EA L+K M
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKR---KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR 362
Query: 361 PFKPHPAIFGTLL-GAC---RIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRW 416
P+ + +L+ G C R+ + + + + DP T + L N Y NR
Sbjct: 363 GIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISK--GCDPDIMTFNI-LINGYCKANRI 419
Query: 417 EHVARIRRSMKENKVVK--------APGYSW---IEISSEVHEFRSSDRLHPELAS 461
+ + R M V+ G+ +E++ ++ + S R+ P++ S
Sbjct: 420 DDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVS 475
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Query: 5 STVTWNSILSAFAKKHGNFEQARQLFE----KIPEPNTVSYNIMLACHLHHFGVGSARAF 60
+T+T+NS++ F K++ E+A Q+ + K +P+ +++NI++ + +
Sbjct: 367 NTITYNSLIDGFCKEN-RLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLEL 425
Query: 61 FDRMEVK----DTASWNTMISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSGYVA 112
F M ++ +T ++NT++ G+ Q G + A LF M + + VS+ ++ G
Sbjct: 426 FREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485
Query: 113 CGDLDAAVECF----YAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLV----T 164
G+L+ A+E F + + + +I G +V+ A LF + LK +
Sbjct: 486 NGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARA 545
Query: 165 WNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALS 199
+N MI+ LF+ M E G P+ L+
Sbjct: 546 YNIMISELCRKDSLSKADILFRKMTEEGHAPDELT 580
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 141/328 (42%), Gaps = 30/328 (9%)
Query: 151 ERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNL 210
ER F S + L + + +G V +A+D + LF+ M++S P + +
Sbjct: 43 ERGFSTFSDRNLSYRDKLSSGLV-GIKADDAVDLFRDMIQSRPLPTVIDFNRLF------ 95
Query: 211 SALQLGKQVHQLV---CKSPLSSDTTAG----TSLISMYAKCGDLKEAWELFVQIPR--- 260
SA+ KQ ++LV CK S + +I+ + +C L A+ +I +
Sbjct: 96 SAIAKTKQ-YELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGY 154
Query: 261 -KDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQ 319
D V +N +++G +AL L D M G KP IT ++ G V V
Sbjct: 155 EPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVV 214
Query: 320 YFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMP---FKPHPAIFGTLL-GA 375
+ MV + G + Y +++++ ++G+ A++L++ M K + ++ G
Sbjct: 215 LIDRMV-ETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 376 CRIHKNLDLAEFAAKNLLELD--PSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVK 433
C+ +LD A F N +E+ + Y L + RW+ A++ R M + K+
Sbjct: 274 CK-DGSLDNA-FNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISP 331
Query: 434 APGYSWIEISSEVHE--FRSSDRLHPEL 459
+ I S V E R +D+L E+
Sbjct: 332 NVVTFSVLIDSFVKEGKLREADQLLKEM 359
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 159/346 (45%), Gaps = 27/346 (7%)
Query: 7 VTWNSILSAFAKKHGN-FEQARQLFEKIP----EPNTVSYNIMLACHLHHFGVGSARAFF 61
VT+ S+L+ + H N E A LF++I +PN V+Y ++ C + + A F
Sbjct: 154 VTFTSLLNGYC--HWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELF 211
Query: 62 DRMEVK----DTASWNTMISGYAQVGLMGEASMLFAVM----PEKNCVSWSAMVSGYVAC 113
++M + ++N +++G ++G G+A+ L M E N ++++A++ +V
Sbjct: 212 NQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKV 271
Query: 114 GDLDAAVECFYAAPVRSV----ITWTAMITGYMKFGRVESAERLF----REMSLKTLVTW 165
G L A E + SV T+ ++I G +G ++ A ++F R V +
Sbjct: 272 GKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIY 331
Query: 166 NAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCK 225
+I G+ ++ R EDG+K+F M + G N ++ T ++ G + + ++V +
Sbjct: 332 TTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSS 391
Query: 226 SPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK----DIVSWNAMISGYAQHGAGEK 281
D L+ G +++A +F + ++ +IV++ +I G + G E
Sbjct: 392 RRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVED 451
Query: 282 ALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRD 327
A LF + GMKP+ IT+ ++ GL+ F M D
Sbjct: 452 AFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKED 497
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 148/317 (46%), Gaps = 25/317 (7%)
Query: 5 STVTWNSILSAFAKKHGNFEQARQLFEKI----PEPNTVSYNIMLA--CHLHHFGVGS-- 56
+ VT+ +++ K + A +LF ++ PN V+YN ++ C + +G +
Sbjct: 187 NVVTYTTLIRCLCKNR-HLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWL 245
Query: 57 ARAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPE----KNCVSWSAMVSGYVA 112
R R + ++ +I + +VG + EA L+ VM + + ++ ++++G
Sbjct: 246 LRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCM 305
Query: 113 CGDLDAAVECFYAAPVRSV----ITWTAMITGYMKFGRVESAERLFREMSLKTLV----T 164
G LD A + FY + +T +I G+ K RVE ++F EMS K +V T
Sbjct: 306 YGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTIT 365
Query: 165 WNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVC 224
+ +I GY GR + ++F M A P+ + +L G ++ + + +
Sbjct: 366 YTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMR 425
Query: 225 KSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK----DIVSWNAMISGYAQHGAGE 280
K + + T +I K G +++A++LF + K +++++ MISG+ + G
Sbjct: 426 KREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIH 485
Query: 281 KALHLFDEMRHDGMKPD 297
+A LF +M+ DG P+
Sbjct: 486 EADSLFKKMKEDGFLPN 502
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 164/358 (45%), Gaps = 24/358 (6%)
Query: 35 EPNTVSYNIMLACHLHHFGVGSARAFFDR---MEVK-DTASWNTMISGYAQVGLMGEASM 90
EP+ V++ +L + H + A A FD+ M K + ++ T+I + + A
Sbjct: 150 EPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVE 209
Query: 91 LFAVM----PEKNCVSWSAMVSGYVACGDLDAAVECFYAAPVR----SVITWTAMITGYM 142
LF M N V+++A+V+G G A R +VIT+TA+I ++
Sbjct: 210 LFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFV 269
Query: 143 KFGRVESAERLFR---EMSL-KTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNAL 198
K G++ A+ L+ +MS+ + T+ ++I G G ++ ++F M +G PN +
Sbjct: 270 KVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEV 329
Query: 199 SLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQI 258
T+++ G ++ G ++ + + + ++T T LI Y G A E+F Q+
Sbjct: 330 IYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQM 389
Query: 259 PRK----DIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLV 314
+ DI ++N ++ G +G EKAL +F+ MR M + +T+ ++ G V
Sbjct: 390 SSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKV 449
Query: 315 DLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMP---FKPHPAIF 369
+ F + G+K Y M+ R G + EA L K M F P+ +++
Sbjct: 450 EDAFDLFCSLFSK-GMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 162/334 (48%), Gaps = 26/334 (7%)
Query: 3 VKSTVTWNSILSAFAKKHGNFEQARQLFEKIP----EPNTVSYNIMLA--CHLHHFGVGS 56
+K++V SI+ K G+F+ A LF ++ + + V+Y+ ++ C+ + G+
Sbjct: 241 IKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGA 300
Query: 57 A--RAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSGY 110
R R + D +++ +I + + G + EA L+ M + + +++++++ G+
Sbjct: 301 KMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGF 360
Query: 111 VACGDLDAAVECFYAAPVR----SVITWTAMITGYMKFGRVESAERLFREMSLKTLV--- 163
L A + F + ++T++ +I Y K RV+ RLFRE+S K L+
Sbjct: 361 CKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNT 420
Query: 164 -TWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQL 222
T+N ++ G+ ++G+ +LF+ M+ G P+ ++ +L G + L ++ +
Sbjct: 421 ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEK 480
Query: 223 VCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK----DIVSWNAMISGYAQHGA 278
+ KS ++ +I + +AW LF + K D+V++N MI G + G+
Sbjct: 481 MQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS 540
Query: 279 GEKALHLFDEMRHDGMKPDWITFVAVLLACNHAG 312
+A LF +M+ DG PD T+ ++ A H G
Sbjct: 541 LSEADMLFRKMKEDGCTPDDFTYNILIRA--HLG 572
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 172/380 (45%), Gaps = 30/380 (7%)
Query: 7 VTWNSILSAFAKKHGNFEQARQLFEKIPEPN----TVSYNIMLACHLHHFGVGSARAFFD 62
VT+ +L+ K GN A LF K+ E N V Y+I++ A + F+
Sbjct: 211 VTYGPVLNRLCK-SGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFN 269
Query: 63 RMEVK----DTASWNTMISGYAQVGLMGEASMLFAVMPEKN----CVSWSAMVSGYVACG 114
ME+K D +++++I G G + + + M +N V++SA++ +V G
Sbjct: 270 EMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEG 329
Query: 115 DLDAAVECFYAAPVRSV----ITWTAMITGYMKFGRVESAERLFREMSLK----TLVTWN 166
L A E + R + IT+ ++I G+ K + A ++F M K +VT++
Sbjct: 330 KLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYS 389
Query: 167 AMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQ-LVCK 225
+I Y + R +DG++LF+ + G PN ++ +++LG L K++ Q +V +
Sbjct: 390 ILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR 449
Query: 226 SPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK----DIVSWNAMISGYAQHGAGEK 281
S T G L+ G+L +A E+F ++ + I +N +I G +
Sbjct: 450 GVPPSVVTYGI-LLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDD 508
Query: 282 ALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMV 341
A LF + G+KPD +T+ ++ G + F M D G Y ++
Sbjct: 509 AWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKED-GCTPDDFTYNILI 567
Query: 342 DL-LGRAGRLPEAVDLIKSM 360
LG +G L +V+LI+ M
Sbjct: 568 RAHLGGSG-LISSVELIEEM 586
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 176/388 (45%), Gaps = 63/388 (16%)
Query: 35 EPNTVSYNIMLACHLHHFGVGSARAFFDRM-EVK---DTASWNTMISGYAQVGLMGEASM 90
EP+T++++ ++ V A A DRM E+K D + +T+I+G G + EA +
Sbjct: 137 EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALV 196
Query: 91 LFAVMPE----KNCVSWSAMVSGYVACGDLDAAVECFYAAPVR----SVITWTAMITGYM 142
L M E + V++ +++ G+ A++ F R SV+ ++ +I
Sbjct: 197 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 256
Query: 143 KFGRVESAERLFREMSLK----TLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNAL 198
K G + A LF EM +K +VT++++I G +G+ +DG K+ + M+ P+ +
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVV 316
Query: 199 SLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQI 258
+ ++ LI ++ K G L EA EL+ ++
Sbjct: 317 TFSA-----------------------------------LIDVFVKEGKLLEAKELYNEM 341
Query: 259 PRK----DIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLV 314
+ D +++N++I G+ + +A +FD M G +PD +T+ ++ + A V
Sbjct: 342 ITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRV 401
Query: 315 DLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFK---PHPAIFGT 371
D G++ F + G+ Y +V ++G+L A +L + M + P +G
Sbjct: 402 DDGMRLFR-EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGI 460
Query: 372 LL-GAC---RIHKNLDLAEFAAKNLLEL 395
LL G C ++K L++ E K+ + L
Sbjct: 461 LLDGLCDNGELNKALEIFEKMQKSRMTL 488
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/419 (23%), Positives = 177/419 (42%), Gaps = 64/419 (15%)
Query: 3 VKSTVTWNSILSAFAKKHGNFEQARQLFEKIPEP----NTVSYNIML--ACHLHHFGVGS 56
V S + N L+ +K A +F + PE N SYNI++ C L +
Sbjct: 207 VLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGR--IKE 264
Query: 57 ARAFFDRMEVK----DTASWNTMISGYAQVGLMGEASMLFAVMPEK-------------- 98
A ME+K D S++T+++GY + G + + L VM K
Sbjct: 265 AHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIG 324
Query: 99 -------------------------NCVSWSAMVSGYVACGDLDAAVECFYAAPVRS--- 130
+ V ++ ++ G+ GD+ AA + FY R
Sbjct: 325 LLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITP 384
Query: 131 -VITWTAMITGYMKFGRVESAERLFREMSLKTL----VTWNAMIAGYVENGRAEDGLKLF 185
V+T+TA+I+G+ + G + A +LF EM K L VT+ +I GY + G +D ++
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 186 KSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKC 245
M+++G PN ++ T+++ G L ++ + K L + S+++ K
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 246 GDLKEAWELFVQIP----RKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITF 301
G+++EA +L + D V++ ++ Y + G +KA + EM G++P +TF
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Query: 302 VAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSM 360
++ G+++ G + N M+ GI + +V L A + K M
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAK-GIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 622
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 160/317 (50%), Gaps = 25/317 (7%)
Query: 5 STVTWNSILSAFAKKHGNFEQARQLFEKI----PEPNTVSYNIMLACHLHHFGVGSARAF 60
+T+ +I+S F + G+ +A +LF ++ EP++V++ ++ + + A
Sbjct: 385 DVLTYTAIISGFCQ-IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRV 443
Query: 61 FDRME----VKDTASWNTMISGYAQVGLMGEASMLFAVM----PEKNCVSWSAMVSGYVA 112
+ M + ++ T+I G + G + A+ L M + N +++++V+G
Sbjct: 444 HNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK 503
Query: 113 CGDLDAAVEC---FYAAPVRS-VITWTAMITGYMKFGRVESAERLFREMSLK----TLVT 164
G+++ AV+ F AA + + +T+T ++ Y K G ++ A+ + +EM K T+VT
Sbjct: 504 SGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVT 563
Query: 165 WNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVC 224
+N ++ G+ +G EDG KL ML G PNA + S++ + L+ +++ +C
Sbjct: 564 FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 623
Query: 225 KSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK----DIVSWNAMISGYAQHGAGE 280
+ D +L+ + K ++KEAW LF ++ K + +++ +I G+ +
Sbjct: 624 SRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFL 683
Query: 281 KALHLFDEMRHDGMKPD 297
+A +FD+MR +G+ D
Sbjct: 684 EAREVFDQMRREGLAAD 700
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 170/398 (42%), Gaps = 36/398 (9%)
Query: 60 FFDRM--EVKDTASWNTMISGYAQV----GLMGEASMLFAVMPEKNCVSWSAMVSGYVA- 112
FFD + KD S + + QV GL+ EA +F M V + Y+
Sbjct: 160 FFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTR 219
Query: 113 ----CGDLDAAVECFYAAP----VRSVITWTAMITGYMKFGRVESAERLFREMSLK---- 160
C A+ F P +V ++ +I + GR++ A L M LK
Sbjct: 220 LSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTP 279
Query: 161 TLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVH 220
+++++ ++ GY G + KL + M G KPN+ S++ + L ++
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 221 QLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDI----VSWNAMISGYAQH 276
+ + + DT T+LI + K GD++ A + F ++ +DI +++ A+ISG+ Q
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 277 GAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEH 336
G +A LF EM G++PD +TF ++ AG + + N M++ G
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVT 458
Query: 337 YACMVDLLGRAGRLPEAVDLIKSM---PFKPHPAIFGTLL-GACR---IHKNLDL-AEFA 388
Y ++D L + G L A +L+ M +P+ + +++ G C+ I + + L EF
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Query: 389 AKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSM 426
A L + Y L + Y + I + M
Sbjct: 519 AAGL----NADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/419 (23%), Positives = 177/419 (42%), Gaps = 64/419 (15%)
Query: 3 VKSTVTWNSILSAFAKKHGNFEQARQLFEKIPEP----NTVSYNIML--ACHLHHFGVGS 56
V S + N L+ +K A +F + PE N SYNI++ C L +
Sbjct: 207 VLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGR--IKE 264
Query: 57 ARAFFDRMEVK----DTASWNTMISGYAQVGLMGEASMLFAVMPEK-------------- 98
A ME+K D S++T+++GY + G + + L VM K
Sbjct: 265 AHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIG 324
Query: 99 -------------------------NCVSWSAMVSGYVACGDLDAAVECFYAAPVRS--- 130
+ V ++ ++ G+ GD+ AA + FY R
Sbjct: 325 LLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITP 384
Query: 131 -VITWTAMITGYMKFGRVESAERLFREMSLKTL----VTWNAMIAGYVENGRAEDGLKLF 185
V+T+TA+I+G+ + G + A +LF EM K L VT+ +I GY + G +D ++
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 186 KSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKC 245
M+++G PN ++ T+++ G L ++ + K L + S+++ K
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 246 GDLKEAWELFVQIP----RKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITF 301
G+++EA +L + D V++ ++ Y + G +KA + EM G++P +TF
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Query: 302 VAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSM 360
++ G+++ G + N M+ GI + +V L A + K M
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAK-GIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 622
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 160/317 (50%), Gaps = 25/317 (7%)
Query: 5 STVTWNSILSAFAKKHGNFEQARQLFEKI----PEPNTVSYNIMLACHLHHFGVGSARAF 60
+T+ +I+S F + G+ +A +LF ++ EP++V++ ++ + + A
Sbjct: 385 DVLTYTAIISGFCQ-IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRV 443
Query: 61 FDRME----VKDTASWNTMISGYAQVGLMGEASMLFAVM----PEKNCVSWSAMVSGYVA 112
+ M + ++ T+I G + G + A+ L M + N +++++V+G
Sbjct: 444 HNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK 503
Query: 113 CGDLDAAVEC---FYAAPVRS-VITWTAMITGYMKFGRVESAERLFREMSLK----TLVT 164
G+++ AV+ F AA + + +T+T ++ Y K G ++ A+ + +EM K T+VT
Sbjct: 504 SGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVT 563
Query: 165 WNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVC 224
+N ++ G+ +G EDG KL ML G PNA + S++ + L+ +++ +C
Sbjct: 564 FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 623
Query: 225 KSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK----DIVSWNAMISGYAQHGAGE 280
+ D +L+ + K ++KEAW LF ++ K + +++ +I G+ +
Sbjct: 624 SRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFL 683
Query: 281 KALHLFDEMRHDGMKPD 297
+A +FD+MR +G+ D
Sbjct: 684 EAREVFDQMRREGLAAD 700
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 170/398 (42%), Gaps = 36/398 (9%)
Query: 60 FFDRM--EVKDTASWNTMISGYAQV----GLMGEASMLFAVMPEKNCVSWSAMVSGYVA- 112
FFD + KD S + + QV GL+ EA +F M V + Y+
Sbjct: 160 FFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTR 219
Query: 113 ----CGDLDAAVECFYAAP----VRSVITWTAMITGYMKFGRVESAERLFREMSLK---- 160
C A+ F P +V ++ +I + GR++ A L M LK
Sbjct: 220 LSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTP 279
Query: 161 TLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVH 220
+++++ ++ GY G + KL + M G KPN+ S++ + L ++
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 221 QLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDI----VSWNAMISGYAQH 276
+ + + DT T+LI + K GD++ A + F ++ +DI +++ A+ISG+ Q
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 277 GAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEH 336
G +A LF EM G++PD +TF ++ AG + + N M++ G
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVT 458
Query: 337 YACMVDLLGRAGRLPEAVDLIKSM---PFKPHPAIFGTLL-GACR---IHKNLDL-AEFA 388
Y ++D L + G L A +L+ M +P+ + +++ G C+ I + + L EF
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Query: 389 AKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSM 426
A L + Y L + Y + I + M
Sbjct: 519 AAGL----NADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 177/373 (47%), Gaps = 33/373 (8%)
Query: 5 STVTWNSILSAFAKKHGNFEQARQLFEKIPE----PNTVSYNIMLACHLHHFGVGSARAF 60
+ V++N+++ ++ N + AR +F I E PN +Y+I++ + +A
Sbjct: 477 NVVSYNNVMLGHCRQK-NMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEV 535
Query: 61 FDRMEVKDT----ASWNTMISGYAQVGLMGEASMLFAVMPEK-----NCVSWSAMVSGYV 111
+ M + + T+I+G +VG +A L A M E+ +C+S+++++ G+
Sbjct: 536 VNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFF 595
Query: 112 ACGDLDAAVECFYA------APVRSVITWTAMITGYMKFGRVESAERLFREMSLK----T 161
G++D+AV + +P +VIT+T+++ G K R++ A + EM K
Sbjct: 596 KEGEMDSAVAAYEEMCGNGISP--NVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLD 653
Query: 162 LVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQ 221
+ + A+I G+ + E LF +LE G P+ S++ G NL + +++
Sbjct: 654 IPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYK 713
Query: 222 LVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPR----KDIVSWNAMISGYAQHG 277
+ K L D T+LI K G+L A EL+ ++ D + + +++G ++ G
Sbjct: 714 KMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKG 773
Query: 278 AGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHY 337
K + +F+EM+ + + P+ + + AV+ G +D + + M+ D GI +
Sbjct: 774 QFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEML-DKGILPDGATF 832
Query: 338 ACMVDLLGRAGRL 350
+V G+ G L
Sbjct: 833 DILVS--GQVGNL 843
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/445 (19%), Positives = 183/445 (41%), Gaps = 68/445 (15%)
Query: 5 STVTWNSILSAFAKKHGNFEQARQLFEKI------PE----------------------- 35
++VT+ S+L + +K+G E+A + ++K+ P
Sbjct: 373 NSVTF-SVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKL 431
Query: 36 ---------PNTVSYNIMLACHLHHFGVGSARAFFDRMEVK----DTASWNTMISGYAQV 82
N N +L+ A +ME + + S+N ++ G+ +
Sbjct: 432 FDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQ 491
Query: 83 GLMGEASMLFAVMPEK----NCVSWSAMVSGYVACGDLDAAVECFYAAPVRSV----ITW 134
M A ++F+ + EK N ++S ++ G D A+E ++ + +
Sbjct: 492 KNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVY 551
Query: 135 TAMITGYMKFGRVESAERLFREMSLK-----TLVTWNAMIAGYVENGRAEDGLKLFKSML 189
+I G K G+ A L M + + +++N++I G+ + G + + ++ M
Sbjct: 552 QTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMC 611
Query: 190 ESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLK 249
+G PN ++ TS++ G + + ++ + + D A +LI + K +++
Sbjct: 612 GNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNME 671
Query: 250 EAWELFVQI------PRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVA 303
A LF ++ P + I +N++ISG+ G AL L+ +M DG++ D T+
Sbjct: 672 SASALFSELLEEGLNPSQPI--YNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTT 729
Query: 304 VLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMP-- 361
++ G + L + + M + G+ Y +V+ L + G+ + V + + M
Sbjct: 730 LIDGLLKDGNLILASELYTEM-QAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKN 788
Query: 362 -FKPHPAIFGTLLGACRIHKNLDLA 385
P+ I+ ++ NLD A
Sbjct: 789 NVTPNVLIYNAVIAGHYREGNLDEA 813
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 92/460 (20%), Positives = 182/460 (39%), Gaps = 87/460 (18%)
Query: 3 VKSTVTWNSILSAFAKKHGNFEQARQLFEKIPEP----NTVSYNIMLACHLHHFGVGSAR 58
V S T+ S++ A + K GN + A +L +++ N V+ ++ H + + SA
Sbjct: 301 VPSQETYTSVILA-SVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSAL 359
Query: 59 AFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDA 118
FD+ME + P N V++S ++ + G+++
Sbjct: 360 VLFDKMEKEG---------------------------PSPNSVTFSVLIEWFRKNGEMEK 392
Query: 119 AVECFYAAPV----RSVITWTAMITGYMKFGRVESAERLFRE---MSLKTLVTWNAMIAG 171
A+E + V SV +I G++K + E A +LF E L + N +++
Sbjct: 393 ALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSW 452
Query: 172 YVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSD 231
+ G+ ++ +L M G PN +S +V+LG + L + V + + L +
Sbjct: 453 LCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPN 512
Query: 232 TTAGT-----------------------------------SLISMYAKCGDLKEAWELFV 256
+ ++I+ K G +A EL
Sbjct: 513 NYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLA 572
Query: 257 Q-IPRKDI----VSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHA 311
I K + +S+N++I G+ + G + A+ ++EM +G+ P+ IT+ +++
Sbjct: 573 NMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKN 632
Query: 312 GLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSM---PFKPHPAI 368
+D ++ + M ++ G+K Y ++D + + A L + P I
Sbjct: 633 NRMDQALEMRDEM-KNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPI 691
Query: 369 FGTLLGACRIHKN----LDLAEFAAKNLLELDPSSATGYV 404
+ +L+ R N LDL + K+ L D + T +
Sbjct: 692 YNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLI 731
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 162/348 (46%), Gaps = 25/348 (7%)
Query: 35 EPNTVSYNIMLACHLHHFGVGSARAFFDRM----EVKDTASWNTMISGYAQVGLMGEASM 90
EPNT++++ ++ V A DRM D + NT+++G G EA +
Sbjct: 155 EPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAML 214
Query: 91 LFAVMPEKNC----VSWSAMVSGYVACGDLDAAVECFYAAPVRSV----ITWTAMITGYM 142
L M E C V++ +++ G A+E R++ + ++ +I G
Sbjct: 215 LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 143 KFGRVESAERLFREMSLK----TLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNAL 198
K G +++A LF EM +K ++T+N +I G+ GR +DG KL + M++ PN +
Sbjct: 275 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 334
Query: 199 SLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQI 258
+ + ++ L+ +++H+ + ++ DT TSLI + K L +A ++ +
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 394
Query: 259 PRK----DIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLV 314
K +I ++N +I+GY + + L LF +M G+ D +T+ ++ G +
Sbjct: 395 VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 454
Query: 315 DLGVQYFNMMVRDFGIKTKPE--HYACMVDLLGRAGRLPEAVDLIKSM 360
++ + F MV K P Y ++D L G +A+++ + +
Sbjct: 455 NVAKELFQEMVSR---KVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 151/325 (46%), Gaps = 25/325 (7%)
Query: 7 VTWNSILSAFAKKHGNFEQARQLFEKIP----EPNTVSYNIMLA--CHLHHFGVGSA--R 58
V ++ I+ K HG+ + A LF ++ N ++YNI++ C+ + G+ R
Sbjct: 264 VKYSIIIDGLCK-HGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLR 322
Query: 59 AFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSGYVACG 114
R + +++ +I + + G + EA L M + + +++++++ G+
Sbjct: 323 DMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKEN 382
Query: 115 DLDAAVECFYAAPVR----SVITWTAMITGYMKFGRVESAERLFREMSLKTLV----TWN 166
LD A + + ++ T+ +I GY K R++ LFR+MSL+ +V T+N
Sbjct: 383 HLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYN 442
Query: 167 AMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKS 226
+I G+ E G+ +LF+ M+ PN ++ +L G + + ++ + + KS
Sbjct: 443 TLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKS 502
Query: 227 PLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK----DIVSWNAMISGYAQHGAGEKA 282
+ D +I + +AW+LF +P K + ++N MI G + G +A
Sbjct: 503 KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEA 562
Query: 283 LHLFDEMRHDGMKPDWITFVAVLLA 307
LF +M DG PD T+ ++ A
Sbjct: 563 ELLFRKMEEDGHAPDGWTYNILIRA 587
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 147/328 (44%), Gaps = 28/328 (8%)
Query: 150 AERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSN 209
ER F S + L + +G V+ +A+D + LF+ M+ S P + + +
Sbjct: 42 CERGFSAFSDRNLSYRERLRSGLVDI-KADDAIDLFRDMIHSRPLPTVIDFSRL------ 94
Query: 210 LSALQLGKQVHQL--VCKS----PLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPR--- 260
SA+ KQ + +CK ++ + + +I+ + +C L A+ +I +
Sbjct: 95 FSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGY 154
Query: 261 -KDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQ 319
+ ++++ +I+G G +AL L D M G KPD IT ++ +G +
Sbjct: 155 EPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAML 214
Query: 320 YFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMP---FKPHPAIFGTLL-GA 375
+ MV ++G + Y +++++ ++G+ A++L++ M K + ++ G
Sbjct: 215 LIDKMV-EYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 376 CRIHKNLDLAEFAAKNLLELD--PSSATGYVQLANVYAAQNRWEHVARIRRSMKENKVVK 433
C+ H +LD A F N +E+ ++ Y L + RW+ A++ R M + K+
Sbjct: 274 CK-HGSLDNA-FNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINP 331
Query: 434 APGYSWIEISSEVHE--FRSSDRLHPEL 459
+ I S V E R ++ LH E+
Sbjct: 332 NVVTFSVLIDSFVKEGKLREAEELHKEM 359
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/452 (22%), Positives = 201/452 (44%), Gaps = 36/452 (7%)
Query: 7 VTWNSILSAFAKKHGNFEQARQLFEKIP----EPNTVSYNIMLACHLHHFGVGSARAFFD 62
VT+N+++SA++ K G E+A +L +P P +YN ++ H A+ F
Sbjct: 271 VTYNTLISAYSSK-GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFA 329
Query: 63 RMEVK----DTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVS----WSAMVSGYVACG 114
M D+ ++ +++ + G + E +F+ M ++ V +S+M+S + G
Sbjct: 330 EMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSG 389
Query: 115 DLDAAVECFY----AAPVRSVITWTAMITGYMKFGRVESAERLFREMSLK----TLVTWN 166
+LD A+ F A + + +T +I GY + G + A L EM + +VT+N
Sbjct: 390 NLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYN 449
Query: 167 AMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKS 226
++ G + + KLF M E P++ +LT ++ G L LQ ++ Q + +
Sbjct: 450 TILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509
Query: 227 PLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDI----VSWNAMISGYAQHGAGEKA 282
+ D +L+ + K GD+ A E++ + K+I +S++ +++ G +A
Sbjct: 510 RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEA 569
Query: 283 LHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVD 342
++DEM +KP + +++ +G G + M+ + G Y ++
Sbjct: 570 FRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISE-GFVPDCISYNTLIY 628
Query: 343 LLGRAGRLPEAVDLIKSMP-----FKPHPAIFGTLL-GACRIHKNLDLAEFAAKNLLE-- 394
R + +A L+K M P + ++L G CR + AE + ++E
Sbjct: 629 GFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCR-QNQMKEAEVVLRKMIERG 687
Query: 395 LDPSSATGYVQLANVYAAQNRWEHVARIRRSM 426
++P +T Y + N + +Q+ RI M
Sbjct: 688 VNPDRST-YTCMINGFVSQDNLTEAFRIHDEM 718
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 170/383 (44%), Gaps = 27/383 (7%)
Query: 37 NTVSYNIMLACHLHHFGVGSARAFFDRMEVK----DTASWNTMISGYAQVGLMGEASMLF 92
N + NIM+ + F +++ K D ++NT+IS Y+ GLM EA L
Sbjct: 234 NVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELM 293
Query: 93 AVMPEK----NCVSWSAMVSGYVACGDLDAAVECFYAAPVRSVI-----TWTAMITGYMK 143
MP K +++ +++G G + A E F A +RS + T+ +++ K
Sbjct: 294 NAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVF-AEMLRSGLSPDSTTYRSLLMEACK 352
Query: 144 FGRVESAERLFREMS----LKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALS 199
G V E++F +M + LV +++M++ + +G + L F S+ E+G P+ +
Sbjct: 353 KGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVI 412
Query: 200 LTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIP 259
T ++ G + + + + + + D +++ K L EA +LF ++
Sbjct: 413 YTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT 472
Query: 260 RK----DIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVD 315
+ D + +I G+ + G + A+ LF +M+ ++ D +T+ +L G +D
Sbjct: 473 ERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDID 532
Query: 316 LGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAV---DLIKSMPFKPHPAIFGTL 372
+ + MV + T P Y+ +V+ L G L EA D + S KP I ++
Sbjct: 533 TAKEIWADMVSKEILPT-PISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSM 591
Query: 373 L-GACRIHKNLDLAEFAAKNLLE 394
+ G CR D F K + E
Sbjct: 592 IKGYCRSGNASDGESFLEKMISE 614
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 153/358 (42%), Gaps = 66/358 (18%)
Query: 3 VKSTVTWNSILSAFAKKHGNFEQARQLFEKIPE----PNTVSYNIMLACHLHHFGVGSAR 58
V V ++S++S F + GN ++A F + E P+ V Y I++ + + A
Sbjct: 372 VPDLVCFSSMMSLFTRS-GNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAM 430
Query: 59 AFFDRMEVK----DTASWNTMISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSGY 110
+ M + D ++NT++ G + ++GEA LF M E+ + + + ++ G+
Sbjct: 431 NLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGH 490
Query: 111 VACGDLDAAVECFYAAPVR----SVITWTAMITGYMKFGRVESAERLFREMSLK------ 160
G+L A+E F + V+T+ ++ G+ K G +++A+ ++ +M K
Sbjct: 491 CKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTP 550
Query: 161 ---------------------------------TLVTWNAMIAGYVENGRAEDGLKLFKS 187
T++ N+MI GY +G A DG +
Sbjct: 551 ISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEK 610
Query: 188 MLESGAKPNALSLTSVLLGC---SNLS-ALQLGKQVHQLVCKSPLSSDTTAGTSLISMYA 243
M+ G P+ +S +++ G N+S A L K++ + + L D S++ +
Sbjct: 611 MISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEE--QGGLVPDVFTYNSILHGFC 668
Query: 244 KCGDLKEAWELFVQIPRK----DIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPD 297
+ +KEA + ++ + D ++ MI+G+ +A + DEM G PD
Sbjct: 669 RQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 134/304 (44%), Gaps = 21/304 (6%)
Query: 68 DTASWNTMISGYAQVGLMGEASMLFAVMPEKNCV----SWSAMVSGYVACGDLDAA---- 119
+ + ++ +I Y Q + EA F ++ K + +A++ V G ++ A
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 120 VECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLK----TLVTWNAMIAGYVEN 175
E + +V T M+ K G++E ++ K +VT+N +I+ Y
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 176 GRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAG 235
G E+ +L +M G P + +V+ G + K+V + +S LS D+T
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 236 TSLISMYAKCGDLKEAWELFVQIPRKDI----VSWNAMISGYAQHGAGEKALHLFDEMRH 291
SL+ K GD+ E ++F + +D+ V +++M+S + + G +KAL F+ ++
Sbjct: 344 RSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 403
Query: 292 DGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVR-----DFGIKTKPEHYACMVDLLGR 346
G+ PD + + ++ G++ + + N M++ D H C +LG
Sbjct: 404 AGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGE 463
Query: 347 AGRL 350
A +L
Sbjct: 464 ADKL 467
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 171/387 (44%), Gaps = 48/387 (12%)
Query: 8 TWNSILSAFAKKHGNFEQARQLFEKIPEP----NTVSYNIMLACHLHHFGVGSARAFFDR 63
T+N+I++A+ K+ +F + + + + N V+Y +++ + + + A FD
Sbjct: 261 TYNTIINAYVKQR-DFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDE 319
Query: 64 MEVK----DTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAA 119
M + D + ++IS + G M A +LF + EK
Sbjct: 320 MRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGL------------------- 360
Query: 120 VECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLK----TLVTWNAMIAGYVEN 175
+P S T+ A+I G K G + +AE L EM K T V +N +I GY
Sbjct: 361 ------SP--SSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRK 412
Query: 176 GRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAG 235
G ++ ++ M + G + + + ++ + L KQ + + + T +
Sbjct: 413 GMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSY 472
Query: 236 TSLISMYAKCGDLKEAWELFVQIPRKDI----VSWNAMISGYAQHGAGEKALHLFDEMRH 291
T+LI +Y K G+++EA LFV++ K + +++N MI Y + G ++A L M
Sbjct: 473 TNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEA 532
Query: 292 DGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLP 351
+GM PD T+ +++ A VD ++ F+ M G+ Y M+ L +AG+
Sbjct: 533 NGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLK-GLDQNSVTYTVMISGLSKAGKSD 591
Query: 352 EAVDLIKSMPFKPHP---AIFGTLLGA 375
EA L M K + ++ L+G+
Sbjct: 592 EAFGLYDEMKRKGYTIDNKVYTALIGS 618
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 107/250 (42%), Gaps = 15/250 (6%)
Query: 141 YMKFGRVESAERLFREMSLKTL-VTWNAMIAGYV---ENGRAEDGLKLFKSMLESGAKPN 196
Y+ G E R+F M K L + + I V + R + L++F+ M++SG K
Sbjct: 164 YVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKIT 223
Query: 197 ALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFV 256
SLT V+ G ++ K++ + + + ++I+ Y K D E +
Sbjct: 224 VYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDF-SGVEGVL 282
Query: 257 QIPRKDIVSWNA-----MISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHA 311
++ +KD V +N ++ ++G A LFDEMR G++ D + +++
Sbjct: 283 KVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRK 342
Query: 312 GLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFKP---HPAI 368
G + F+ + G+ Y ++D + + G + A L+ M K +
Sbjct: 343 GNMKRAFLLFDELTEK-GLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVV 401
Query: 369 FGTLL-GACR 377
F TL+ G CR
Sbjct: 402 FNTLIDGYCR 411
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 153/340 (45%), Gaps = 27/340 (7%)
Query: 8 TWNSILSAFAKKHGNFEQARQLFEKIP----EPNTVSYNIMLA--CHLHHFGVGS--ARA 59
T+NS++S K G ++A ++ +++ PNTV+YN +++ C + + AR
Sbjct: 332 TYNSVISGLCK-LGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARV 390
Query: 60 FFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNC----VSWSAMVSGYVACGD 115
+ + D ++N++I G A LF M K C +++ ++ + G
Sbjct: 391 LTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGK 450
Query: 116 LDAAVECF----YAAPVRSVITWTAMITGYMKFGRVESAERLFREMSL----KTLVTWNA 167
LD A+ + RSVIT+ +I G+ K + AE +F EM + + VT+N
Sbjct: 451 LDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNT 510
Query: 168 MIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSP 227
+I G ++ R ED +L M+ G KP+ + S+L ++ + Q + +
Sbjct: 511 LIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNG 570
Query: 228 LSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIV----SWNAMISGYAQHGAGEKAL 283
D +LIS K G ++ A +L I K I ++N +I G + +A+
Sbjct: 571 CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAI 630
Query: 284 HLFDEM-RHDGMKPDWITFVAVLLA-CNHAGLVDLGVQYF 321
+LF EM + PD +++ V CN G + V +
Sbjct: 631 NLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFL 670
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/421 (22%), Positives = 175/421 (41%), Gaps = 28/421 (6%)
Query: 35 EPNTVSYNIMLACHLHHFGVGSARAFFDRMEV----KDTASWNTMISGYAQVGLMGEASM 90
+P+T YN ML + + +M V D +++N +I + + A +
Sbjct: 151 KPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAIL 210
Query: 91 LFAVMPEKNCV----SWSAMVSGYVACGDLDAAVECFYAAPVRSVITWT-----AMITGY 141
+ MP V +++ ++ GY+ GDLD A+ V +W+ ++ G+
Sbjct: 211 MLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALR-IREQMVEFGCSWSNVSVNVIVHGF 269
Query: 142 MKFGRVESAERLFREMS-----LKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPN 196
K GRVE A +EMS T+N ++ G + G + +++ ML+ G P+
Sbjct: 270 CKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPD 329
Query: 197 ALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFV 256
+ SV+ G L ++ +V + S +T +LIS K ++EA EL
Sbjct: 330 VYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELAR 389
Query: 257 QIPRK----DIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAG 312
+ K D+ ++N++I G A+ LF+EMR G +PD T+ ++ + G
Sbjct: 390 VLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKG 449
Query: 313 LVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMP---FKPHPAIF 369
+D + M G Y ++D +A + EA ++ M + +
Sbjct: 450 KLDEALNMLKQMELS-GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTY 508
Query: 370 GTLL-GACRIHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSMKE 428
TL+ G C+ + D A+ + ++E Y L + + A I ++M
Sbjct: 509 NTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTS 568
Query: 429 N 429
N
Sbjct: 569 N 569
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 159/369 (43%), Gaps = 30/369 (8%)
Query: 23 FEQARQLFEKIPE----PNTVSYNIMLACHLHHFGVGSARAFFDRMEVK----DTASWNT 74
FE+AR+L ++ E PN ++YN ++ + + A + ME + +T ++N
Sbjct: 374 FEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNE 433
Query: 75 MISGYAQVGLMGEASMLFAVMPEK---NCVSWSAMVSGYVACGDLDAAVECFYAAPVRSV 131
+I GY + + +L ++ K + V++++++ G G+ D+A R +
Sbjct: 434 LIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGL 493
Query: 132 I----TWTAMITGYMKFGRVESAERLFREMSLK----TLVTWNAMIAGYVENGRAEDGLK 183
+ T+T+MI K RVE A LF + K +V + A+I GY + G+ ++
Sbjct: 494 VPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHL 553
Query: 184 LFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYA 243
+ + ML PN+L+ +++ G L+ + + + K L + T LI
Sbjct: 554 MLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLL 613
Query: 244 KCGDLKEAWELFVQI----PRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWI 299
K GD A+ F Q+ + D ++ I Y + G A + +MR +G+ PD
Sbjct: 614 KDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLF 673
Query: 300 TFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLL------GRAGRLPEA 353
T+ +++ G + M RD G + + ++ L + G PE
Sbjct: 674 TYSSLIKGYGDLGQTNFAFDVLKRM-RDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPEL 732
Query: 354 VDLIKSMPF 362
+ M F
Sbjct: 733 CAMSNMMEF 741
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 173/395 (43%), Gaps = 29/395 (7%)
Query: 9 WNSILSAFAKKHGNFEQARQLFEKIPE----PNTVSYNIMLACHLHHFGVGSARAFFDRM 64
+N++L++ A+ G ++ +Q++ ++ E PN +YN M+ + V A + ++
Sbjct: 186 YNTLLNSLAR-FGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKI 244
Query: 65 EV----KDTASWNTMISGYAQVGLMGEASMLFAVMPEKNC----VSWSAMVSGYVACGDL 116
D ++ ++I GY Q + A +F MP K C V+++ ++ G +
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304
Query: 117 DAAVECFYAAP----VRSVITWTAMITGYMKFGRVESAERLFREMS----LKTLVTWNAM 168
D A++ F +V T+T +I R A L +EM + T+ +
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364
Query: 169 IAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPL 228
I + E +L MLE G PN ++ +++ G ++ V +L+ L
Sbjct: 365 IDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKL 424
Query: 229 SSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK---DIVSWNAMISGYAQHGAGEKALHL 285
S +T LI Y K K L + RK D+V++N++I G + G + A L
Sbjct: 425 SPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 286 FDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLG 345
M G+ PD T+ +++ + + V+ F+ + + G+ Y ++D
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQK-GVNPNVVMYTALIDGYC 543
Query: 346 RAGRLPEAVDLIKSMPFK---PHPAIFGTLL-GAC 376
+AG++ EA +++ M K P+ F L+ G C
Sbjct: 544 KAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLC 578
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/314 (20%), Positives = 131/314 (41%), Gaps = 55/314 (17%)
Query: 134 WTAMITGYMKFGRVESAERLFREM----SLKTLVTWNAMIAGYVENGRAEDGLKLFKSML 189
+ ++ +FG V+ ++++ EM + T+N M+ GY + G E+ + ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 190 ESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLK 249
E+G P+ + TS+++G Y + DL
Sbjct: 246 EAGLDPDFFTYTSLIMG-----------------------------------YCQRKDLD 270
Query: 250 EAWELFVQIP----RKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVL 305
A+++F ++P R++ V++ +I G ++A+ LF +M+ D P T+ ++
Sbjct: 271 SAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLI 330
Query: 306 LACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPFK-- 363
+ + + M + GIK Y ++D L + +A +L+ M K
Sbjct: 331 KSLCGSERKSEALNLVKEM-EETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGL 389
Query: 364 -PHPAIFGTLL-GACR---IHKNLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEH 418
P+ + L+ G C+ I +D+ E +L P++ T Y +L Y N +
Sbjct: 390 MPNVITYNALINGYCKRGMIEDAVDVVELMESR--KLSPNTRT-YNELIKGYCKSNVHKA 446
Query: 419 VARIRRSMKENKVV 432
+ + + M E KV+
Sbjct: 447 MGVLNK-MLERKVL 459
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 122/308 (39%), Gaps = 22/308 (7%)
Query: 3 VKSTVTWNSILSAFAKKHGNFEQARQLFEKI----PEPNTVSYNIMLACHLHHFGVGSAR 58
++ TV+ ++IL K G+F+ A F+++ +P+ +Y + + + A
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAE 657
Query: 59 AFFDRMEVK----DTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACG 114
+M D +++++I GY +G A + M + C S +
Sbjct: 658 DMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEP-----SQHTFLS 712
Query: 115 DLDAAVECFYAAPVRSVITWTAMITGYMKFGRV-ESAERLFREMSLKTLVTWNAMIAGYV 173
+ +E Y S AM + M+F V E E++ ++ +I G
Sbjct: 713 LIKHLLEMKYGKQKGSEPELCAM-SNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGIC 771
Query: 174 ENGRAEDGLKLFKSMLES-GAKPNALSLTSVLLGCSNLSA-LQLGKQVHQLVCKSPLSSD 231
E G K+F M + G P+ L ++L C L + K V ++C L
Sbjct: 772 EVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQL 831
Query: 232 TTAGTSLISMYAKCGDLKEAWELFVQIPR----KDIVSWNAMISGYAQHGAGEKALHLFD 287
+ + +Y K G+ + +F + + +D ++W +I G + G E LF+
Sbjct: 832 ESCKVLICGLYKK-GEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFN 890
Query: 288 EMRHDGMK 295
M +G K
Sbjct: 891 VMEKNGCK 898
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 168/356 (47%), Gaps = 25/356 (7%)
Query: 54 VGSARAFFDRMEVK----DTASWNTMISGYAQVGLMGEASMLFAVMPEK----NCVSWSA 105
V +A +F ME K + +N M+ + ++ M A +F+ M EK N ++S
Sbjct: 465 VDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSI 524
Query: 106 MVSGYVACGDLDAAVECFYAAPVRSV----ITWTAMITGYMKFGRVESAERLFREMSLK- 160
++ G+ D A + + + + +I G K G+ A+ + + + +
Sbjct: 525 LIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEK 584
Query: 161 ----TLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLG 216
+ ++N++I G+V+ G + ++ ++ M E+G PN ++ TS++ G + + L
Sbjct: 585 RYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLA 644
Query: 217 KQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPR----KDIVSWNAMISG 272
++ + L D A +LI + K D+K A+ LF ++P ++ +N++ISG
Sbjct: 645 LEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISG 704
Query: 273 YAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKT 332
+ G + A+ L+ +M +DG+ D T+ ++ G ++L ++ ++ D GI
Sbjct: 705 FRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELL-DLGIVP 763
Query: 333 KPEHYACMVDLLGRAGRLPEAVDLIKSMPFK---PHPAIFGTLLGACRIHKNLDLA 385
+ +V+ L + G+ +A +++ M K P+ ++ T++ NL+ A
Sbjct: 764 DEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEA 819
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 161/333 (48%), Gaps = 26/333 (7%)
Query: 5 STVTWNSILSAFAKKHGNFEQARQLF----EKIPEPNTVSYNIMLACHLHHFGVGSARAF 60
+ V +N+++ A + N + AR +F EK EPN +Y+I++ + +A
Sbjct: 483 NVVFYNNMMLAHCRMK-NMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDV 541
Query: 61 FDRMEVKDTAS----WNTMISGYAQVGLMGEA-SMLFAVMPEK----NCVSWSAMVSGYV 111
++M + + +NT+I+G +VG +A ML ++ EK +C S+++++ G+V
Sbjct: 542 INQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFV 601
Query: 112 ACGDLDAAVECFYAAPVR----SVITWTAMITGYMKFGRVESAERLFRE---MSLK-TLV 163
GD D+AVE + +V+T+T++I G+ K R++ A + E M LK L
Sbjct: 602 KVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLP 661
Query: 164 TWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLV 223
+ A+I G+ + + LF + E G PN S++ G NL + +++ +
Sbjct: 662 AYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKM 721
Query: 224 CKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWN----AMISGYAQHGAG 279
+S D T++I K G++ A +L+ ++ IV +++G ++ G
Sbjct: 722 VNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQF 781
Query: 280 EKALHLFDEMRHDGMKPDWITFVAVLLACNHAG 312
KA + +EM+ + P+ + + V+ + G
Sbjct: 782 LKASKMLEEMKKKDVTPNVLLYSTVIAGHHREG 814
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/388 (20%), Positives = 171/388 (44%), Gaps = 59/388 (15%)
Query: 102 SWSAMVSGYVACGDLDAAVECFYAAPVRSVITWTA----MITGYMKFGRVESAERLFREM 157
+++ +++ Y+ +D AV+CF R V+ + +++ ++ ++ A+ ++ +M
Sbjct: 171 AFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKM 230
Query: 158 SLKTL----VTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLT-SVLLGCSNLSA 212
L + VT ++ + + E+ +K+F+ ++ GA+P+ L + +V C
Sbjct: 231 VLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDL 290
Query: 213 LQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQ-----IPRKDIVSWN 267
+ + ++ K + + TS+I + K G+++EA + + IP +++
Sbjct: 291 VMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMS-VIAAT 349
Query: 268 AMISGYAQHGAGEKALHLFDEMRHDGMKPDWITF-VAVLLACNHAGLVDLGVQYFNM--- 323
++++GY + KAL LF+ M +G+ PD + F V V C + + Y M
Sbjct: 350 SLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSV 409
Query: 324 -----------MVRDFGIKTKPEH----------------YAC--MVDLLGRAGRLPEAV 354
M++ PE + C + L + G++ A
Sbjct: 410 RIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAAT 469
Query: 355 DLIKSMPFK---PHPAIFGTLLGA-CRIHKNLDLAEFAAKNLLE--LDPSSATGYVQLAN 408
+K M K P+ + ++ A CR+ KN+DLA +LE L+P++ T + +
Sbjct: 470 SFLKMMEQKGIEPNVVFYNNMMLAHCRM-KNMDLARSIFSEMLEKGLEPNNFTYSILIDG 528
Query: 409 VYA---AQNRWEHVARIRRSMKE-NKVV 432
+ QN W+ + ++ S E N+V+
Sbjct: 529 FFKNKDEQNAWDVINQMNASNFEANEVI 556
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 148/319 (46%), Gaps = 44/319 (13%)
Query: 5 STVTWNSILSAFAKKHGNFEQARQLFEKIPE----PNTVSYNIMLACHLHHFGVGSARAF 60
S VT+NS++ K G + L + + PN +++N++L + + A
Sbjct: 262 SVVTYNSLVRGLCK-AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANEL 320
Query: 61 FDRMEVK----DTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDL 116
+ M + + ++NT++ GY + EA+ + +M C
Sbjct: 321 YKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC---------------- 364
Query: 117 DAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLV----TWNAMIAGY 172
+P ++T+T++I GY RV+ ++FR +S + LV T++ ++ G+
Sbjct: 365 ---------SP--DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413
Query: 173 VENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDT 232
++G+ + +LF+ M+ G P+ ++ +L G + L+ ++ + + KS +
Sbjct: 414 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 473
Query: 233 TAGTSLISMYAKCGDLKEAWELFVQIPRK----DIVSWNAMISGYAQHGAGEKALHLFDE 288
T++I K G +++AW LF +P K +++++ MISG + G+ +A L +
Sbjct: 474 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 533
Query: 289 MRHDGMKPDWITFVAVLLA 307
M DG P+ T+ ++ A
Sbjct: 534 MEEDGNAPNDCTYNTLIRA 552
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 99/438 (22%), Positives = 195/438 (44%), Gaps = 69/438 (15%)
Query: 5 STVTWNSILSAFAK-KHGNF--EQARQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFF 61
S V ++ SA A+ K N + +QL N + NIM+ C A +
Sbjct: 87 SLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVL 146
Query: 62 DR-MEV---KDTASWNTMISGYAQVGLMGEASMLFAVMPEKNC----VSWSAMVSGYVAC 113
+ M++ DT ++NT+I G G + EA +L M E C V+++++V+G
Sbjct: 147 GKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRS 206
Query: 114 GDLDAAVECFYAAPVRS----VITWTAMITGYMKFGRVESAERLFREMSLK----TLVTW 165
GD A++ R+ V T++ +I + G +++A LF+EM K ++VT+
Sbjct: 207 GDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTY 266
Query: 166 NAMIAG-----------------------------------YVENGRAEDGLKLFKSMLE 190
N+++ G +V+ G+ ++ +L+K M+
Sbjct: 267 NSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMIT 326
Query: 191 SGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKE 250
G PN ++ +++ G + L + L+ ++ S D TSLI Y + +
Sbjct: 327 RGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDD 386
Query: 251 AWELFVQIPRKDI----VSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLL 306
++F I ++ + V+++ ++ G+ Q G + A LF EM G+ PD +T+ +L
Sbjct: 387 GMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLD 446
Query: 307 ACNHAGLVDLGVQYFNMMVR---DFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMP-- 361
G ++ ++ F + + D GI Y +++ + + G++ +A +L S+P
Sbjct: 447 GLCDNGKLEKALEIFEDLQKSKMDLGI----VMYTTIIEGMCKGGKVEDAWNLFCSLPCK 502
Query: 362 -FKPHPAIFGTLL-GACR 377
KP+ + ++ G C+
Sbjct: 503 GVKPNVMTYTVMISGLCK 520
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 124/288 (43%), Gaps = 49/288 (17%)
Query: 164 TWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLV 223
T+N +I G G+ + + L M+E+G +P+ ++ S++ G +
Sbjct: 160 TFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNG----------------I 203
Query: 224 CKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKAL 283
C+ S DT+ L L++ E V + D+ +++ +I + G + A+
Sbjct: 204 CR---SGDTSLALDL---------LRKMEERNV---KADVFTYSTIIDSLCRDGCIDAAI 248
Query: 284 HLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDL 343
LF EM G+K +T+ +++ AG + G MV I + ++D+
Sbjct: 249 SLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR-EIVPNVITFNVLLDV 307
Query: 344 LGRAGRLPEAVDLIKSMPFK---PHPAIFGTLL-GACRIHKNLDLAEFAAKNLLEL---- 395
+ G+L EA +L K M + P+ + TL+ G C ++ L+E A N+L+L
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNR---LSE--ANNMLDLMVRN 362
Query: 396 --DPSSATGYVQLANVYAAQNRWEHVARIRRSM-KENKVVKAPGYSWI 440
P T + L Y R + ++ R++ K V A YS +
Sbjct: 363 KCSPDIVT-FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 409
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 129/296 (43%), Gaps = 30/296 (10%)
Query: 149 SAERLFREMSLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCS 208
S ER F +S + + +G V+ + +D + LF+ M+ S P+ + +
Sbjct: 41 SCERDFSSISNGNVCFRERLRSGIVD-IKKDDAIALFQEMIRSRPLPSLVDFSRFF---- 95
Query: 209 NLSALQLGKQVHQLV--CK----SPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPR-- 260
SA+ KQ + ++ CK + ++ + +I+ + +C A+ + ++ +
Sbjct: 96 --SAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLG 153
Query: 261 --KDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGV 318
D ++N +I G G +A+ L D M +G +PD +T+ +++ +G L +
Sbjct: 154 YEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLAL 213
Query: 319 QYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMP---FKPHPAIFGTLL-G 374
M + +K Y+ ++D L R G + A+ L K M K + +L+ G
Sbjct: 214 DLLRKM-EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272
Query: 375 ACRIHK----NLDLAEFAAKNLLELDPSSATGYVQLANVYAAQNRWEHVARIRRSM 426
C+ K L L + ++ E+ P+ T V L +V+ + + + + + M
Sbjct: 273 LCKAGKWNDGALLLKDMVSR---EIVPNVITFNV-LLDVFVKEGKLQEANELYKEM 324
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/456 (20%), Positives = 198/456 (43%), Gaps = 56/456 (12%)
Query: 3 VKSTVTWNSILSAFAKKHGNFEQARQLFEKIP---EPNTVSYNIMLACHLHHFGVGSARA 59
V +TVT+N+++ + +G + L + + P+T +YNI+++ H + + A A
Sbjct: 330 VPTTVTFNTMIHIYGN-NGQLGEVTSLMKTMKLHCAPDTRTYNILISLHTKNNDIERAGA 388
Query: 60 FFDRMEVK----DTASWNTMISGYAQVGLMGEASMLFAVMPEKNC----VSWSAMVSGYV 111
+F M+ D S+ T++ ++ ++ EA L A M + N + SA+ YV
Sbjct: 389 YFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYV 448
Query: 112 ACGDLDAA---VECFYAAPVRSVITWTAMITGYMKFGRVESAERLF---REMSLKTLVTW 165
L+ + + F+ A S ++A I Y + G + AER+F +E++ +T++ +
Sbjct: 449 EAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVIEY 508
Query: 166 NAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCK 225
N MI Y + E +LF+SM+ G P+ + +++ ++ G+ + + +
Sbjct: 509 NVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRE 568
Query: 226 SPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPR----KDIVSWNAMISGYAQHGAGEK 281
+ SD ++IS + K G L A E++ ++ D+V + +I+ +A G ++
Sbjct: 569 TGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQ 628
Query: 282 ALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYA--C 339
A+ + M+ G+ + + + +++ G +D + +++ P+ Y C
Sbjct: 629 AMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNC 688
Query: 340 MVDLLGRAGRLPEAVDLIKSMPFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELDPSS 399
M++L + +A + SM + F + C KN
Sbjct: 689 MINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKN------------------ 730
Query: 400 ATGYVQLANVYAAQNRWEHVARIRRSMKENKVVKAP 435
R+E +I + M+E K++ P
Sbjct: 731 --------------GRFEEATQIAKQMREMKILTDP 752
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 88/446 (19%), Positives = 162/446 (36%), Gaps = 82/446 (18%)
Query: 35 EPNTVSYNIMLACHLHHFGVGSARAFFDRMEVKDTA----------SWNTMISGYAQVGL 84
+P+ V+ I+L + A FF + + ++NTMI Y + G
Sbjct: 254 QPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQ 313
Query: 85 MGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPVRSVITWTAMITGYMKF 144
+ EAS F M E+ V + +T+ MI Y
Sbjct: 314 IKEASETFKRMLEEGIVP---------------------------TTVTFNTMIHIYGNN 346
Query: 145 GRVESAERLFREMSL---KTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLT 201
G++ L + M L T+N +I+ + +N E FK M + G KP+ +S
Sbjct: 347 GQLGEVTSLMKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYR 406
Query: 202 SVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELF------ 255
++L S ++ + + + + D ++L MY + L+++W F
Sbjct: 407 TLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVA 466
Query: 256 -------------------------------VQIPRKDIVSWNAMISGYAQHGAGEKALH 284
++ ++ ++ +N MI Y + EKA
Sbjct: 467 GNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACE 526
Query: 285 LFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLL 344
LF+ M G+ PD T+ ++ A + G Y M R+ G + Y ++
Sbjct: 527 LFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKM-RETGYVSDCIPYCAVISSF 585
Query: 345 GRAGRLPEAVDLIKSM---PFKPHPAIFGTLLGACRIHKNLDLAEFAAKNLLELD-PSSA 400
+ G+L A ++ K M +P ++G L+ A N+ A + + E P ++
Sbjct: 586 VKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNS 645
Query: 401 TGYVQLANVYAAQNRWEHVARIRRSM 426
Y L +Y + I R +
Sbjct: 646 VIYNSLIKLYTKVGYLDEAEAIYRKL 671
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 107/223 (47%), Gaps = 23/223 (10%)
Query: 3 VKSTVTWNSILSAFAKKHGNFEQARQLFEKIPE----PNTVSYNIMLACHLHHFGVGSAR 58
V + + +++S+F K G A ++++++ E P+ V Y +++ V A
Sbjct: 572 VSDCIPYCAVISSFVK-LGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAM 630
Query: 59 AFFDRMEVK----DTASWNTMISGYAQVGLMGEASMLFAVMPEK-------NCVSWSAMV 107
++ + M+ ++ +N++I Y +VG + EA ++ + + + + + M+
Sbjct: 631 SYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMI 690
Query: 108 SGYVACGDLDAAVECFYAAPVR---SVITWTAMITGYMKFGRVESAERLFREMSLKTLVT 164
+ Y + A F + R + T+ M+ Y K GR E A ++ ++M ++T
Sbjct: 691 NLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILT 750
Query: 165 ----WNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSV 203
+N+++ + +GR ++ ++ FK M+ SG +P+ + S+
Sbjct: 751 DPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSL 793
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 159/355 (44%), Gaps = 71/355 (20%)
Query: 5 STVTWNSILSAFAKKHGNFEQARQLFEKIPE----PNTVSYNIMLACHLHHFGVGSARAF 60
VT +S+++ F + + F+ A L K+ E P+ V YN ++ V A
Sbjct: 138 DVVTVSSLINGFCQGNRVFD-AIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVEL 196
Query: 61 FDRMEVK----DTASWNTMISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSGYVA 112
FDRME D ++N++++G G +A+ L M + N ++++A++ +V
Sbjct: 197 FDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVK 256
Query: 113 CGDLDAAVECFYAAPVR---------------------------------------SVIT 133
G A++ + R V+T
Sbjct: 257 EGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVT 316
Query: 134 WTAMITGYMKFGRVESAERLFREMSLKTLV----TWNAMIAGYVENGRAEDGLKLFKSML 189
+ +I G+ K RV+ +LFREM+ + LV T+N +I GY + GR + ++F M
Sbjct: 317 YNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM- 375
Query: 190 ESGAKPNALSLTSVLLG-CSNL---SALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKC 245
++PN + + +L G C N AL L + + KS + D T +I K
Sbjct: 376 --DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQ----KSEIELDITTYNIVIHGMCKI 429
Query: 246 GDLKEAWELFVQIPRK----DIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKP 296
G++++AW+LF + K D+VS+ MISG+ + +K+ L+ +M+ DG+ P
Sbjct: 430 GNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 178/401 (44%), Gaps = 33/401 (8%)
Query: 5 STVTWNSILSAFAKKHGNFEQARQLFEKIPEP----NTVSYNIMLACHLHHFGVGSARAF 60
S V ++ +LS AK N++ LF + + SYNI++ C A +
Sbjct: 68 SIVDFSKVLSKIAKSK-NYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 61 FDRMEV----KDTASWNTMISGYAQVGLMGEASMLFAVMPE----KNCVSWSAMVSGYVA 112
+M D + +++I+G+ Q + +A L + M E + V ++ ++ G
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 113 CGDLDAAVECFYAAPVRSV----ITWTAMITGYMKFGRVESAERLFREMSLKTLV----T 164
G ++ AVE F V +T+ +++ G GR A RL R+M ++ +V T
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 165 WNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVC 224
+ A+I +V+ G+ + +KL++ M P+ + S++ G + KQ+ L+
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 225 KSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK----DIVSWNAMISGYAQHGAGE 280
D +LI+ + K + E +LF ++ ++ D +++N +I GY Q G +
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 366
Query: 281 KALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACM 340
A +F M +P+ T+ +L V+ + F M + I+ Y +
Sbjct: 367 AAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKS-EIELDITTYNIV 422
Query: 341 VDLLGRAGRLPEAVDLIKSMP---FKPHPAIFGTLL-GACR 377
+ + + G + +A DL +S+ KP + T++ G CR
Sbjct: 423 IHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCR 463
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 176/392 (44%), Gaps = 57/392 (14%)
Query: 8 TWNSILSAFAKKHGNFEQARQLFEKIPE----PNTVSYNIMLACHLHHFG-VGSA----R 58
++ S++SAFA G + +A +F+K+ E P ++YN++L FG +G+
Sbjct: 210 SYTSLISAFANS-GRYREAVNVFKKMEEDGCKPTLITYNVILNV----FGKMGTPWNKIT 264
Query: 59 AFFDRME----VKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACG 114
+ ++M+ D ++NT+I+ + L EA+ +F M +G+
Sbjct: 265 SLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMK----------AAGFSY-- 312
Query: 115 DLDAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLK----TLVTWNAMIA 170
+T+ A++ Y K R + A ++ EM L ++VT+N++I+
Sbjct: 313 ---------------DKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLIS 357
Query: 171 GYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSS 230
Y +G ++ ++L M E G KP+ + T++L G ++ + + + +
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKP 417
Query: 231 DTTAGTSLISMYAKCGDLKEAWELFVQIP----RKDIVSWNAMISGYAQHGAGEKALHLF 286
+ + I MY G E ++F +I DIV+WN +++ + Q+G + +F
Sbjct: 418 NICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVF 477
Query: 287 DEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGR 346
EM+ G P+ TF ++ A + G + + + M+ D G+ Y ++ L R
Sbjct: 478 KEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRML-DAGVTPDLSTYNTVLAALAR 536
Query: 347 AGRLPEAVDLIKSMP---FKPHPAIFGTLLGA 375
G ++ ++ M KP+ + +LL A
Sbjct: 537 GGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 156/331 (47%), Gaps = 36/331 (10%)
Query: 7 VTWNSILSAFAKKHGNFEQARQLFEKIPE----PNTVSYNIMLAC----HLHHFGVGSAR 58
+T+N IL+ F K + + L EK+ P+ +YN ++ C LH A
Sbjct: 244 ITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQ----EAA 299
Query: 59 AFFDRMEVK----DTASWNTMISGYAQVGLMGEASMLFAVMP----EKNCVSWSAMVSGY 110
F+ M+ D ++N ++ Y + EA + M + V++++++S Y
Sbjct: 300 QVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAY 359
Query: 111 VACGDLDAAVECFYAAPVR----SVITWTAMITGYMKFGRVESAERLFREMS----LKTL 162
G LD A+E + V T+T +++G+ + G+VESA +F EM +
Sbjct: 360 ARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNI 419
Query: 163 VTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVL--LGCSNLSALQLGKQVH 220
T+NA I Y G+ + +K+F + G P+ ++ ++L G + + + G V
Sbjct: 420 CTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSG--VF 477
Query: 221 QLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQI----PRKDIVSWNAMISGYAQH 276
+ + ++ + +LIS Y++CG ++A ++ ++ D+ ++N +++ A+
Sbjct: 478 KEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARG 537
Query: 277 GAGEKALHLFDEMRHDGMKPDWITFVAVLLA 307
G E++ + EM KP+ +T+ ++L A
Sbjct: 538 GMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/463 (22%), Positives = 191/463 (41%), Gaps = 70/463 (15%)
Query: 5 STVTWNSILSAFAKKHGNFEQA----RQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAF 60
S VT+NS++SA+A+ G ++A Q+ EK +P+ +Y +L+ V SA +
Sbjct: 348 SIVTYNSLISAYAR-DGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSI 406
Query: 61 FDRME----VKDTASWNTMISGYAQVGLMGEASMLFAVMP----EKNCVSWSAMVSGYVA 112
F+ M + ++N I Y G E +F + + V+W+ +++ +
Sbjct: 407 FEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQ 466
Query: 113 CGDLDAAVECFYAAPVRSVI-----TWTAMITGYMKFGRVESAERLFREM----SLKTLV 163
G +D+ V + R+ T+ +I+ Y + G E A ++R M L
Sbjct: 467 NG-MDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLS 525
Query: 164 TWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLV 223
T+N ++A G E K+ M + KPN L+ S+L +N + L + + V
Sbjct: 526 TYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEV 585
Query: 224 CKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK----DIVSWNAMISGYAQHGAG 279
+ +L+ + +KC L EA F ++ + DI + N+M+S Y +
Sbjct: 586 YSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMV 645
Query: 280 EKALHLFDEMRH-----------------------------------DGMKPDWITFVAV 304
KA + D M+ G+KPD I++ V
Sbjct: 646 AKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTV 705
Query: 305 LLA-CNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSM--- 360
+ A C + + D + M R+ GI Y + EA+ +++ M
Sbjct: 706 IYAYCRNTRMRDASRIFSEM--RNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKH 763
Query: 361 PFKPHPAIFGTLL-GACRIHKNLDLAEFAAKNLLELDPSSATG 402
+P+ + +++ G C++++ D A+ ++L LDP + G
Sbjct: 764 GCRPNQNTYNSIVDGYCKLNRK-DEAKLFVEDLRNLDPHAPKG 805
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 109/230 (47%), Gaps = 16/230 (6%)
Query: 143 KFGRVESAERLFREMSLK----TLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNAL 198
K GRV SA +F + + ++ ++I+ + +GR + + +FK M E G KP +
Sbjct: 185 KEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLI 244
Query: 199 SLTSVL--LGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFV 256
+ +L G ++ V ++ ++ D +LI+ + +EA ++F
Sbjct: 245 TYNVILNVFGKMGTPWNKITSLVEKMKSDG-IAPDAYTYNTLITCCKRGSLHQEAAQVFE 303
Query: 257 QIPRK----DIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAG 312
++ D V++NA++ Y + ++A+ + +EM +G P +T+ +++ A G
Sbjct: 304 EMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDG 363
Query: 313 LVDLGVQYFNMMVRDFGIKTKPE--HYACMVDLLGRAGRLPEAVDLIKSM 360
++D ++ N M TKP+ Y ++ RAG++ A+ + + M
Sbjct: 364 MLDEAMELKNQMAEK---GTKPDVFTYTTLLSGFERAGKVESAMSIFEEM 410
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 164/378 (43%), Gaps = 61/378 (16%)
Query: 7 VTWNSILSAFAKKHGNFEQARQLFEKIPE----PNTVSYNIMLACHLHHFGVGSARAFFD 62
VT S+++ F +++ A L +K+ E P+ V+YN ++ V A FF
Sbjct: 156 VTIGSLVNGFCRRN-RVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFK 214
Query: 63 RMEVK----DTASWNTMISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSGYVACG 114
+E K + ++ +++G +A+ L + M +K N +++SA++ +V G
Sbjct: 215 EIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNG 274
Query: 115 DLDAAVECFYAAPVRSV----ITWTAMITGYMKFGRVESAERLFREM----SLKTLVTWN 166
+ A E F S+ +T++++I G R++ A ++F M L +V++N
Sbjct: 275 KVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYN 334
Query: 167 AMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKS 226
+I G+ + R EDG+KLF+ M + G
Sbjct: 335 TLINGFCKAKRVEDGMKLFREMSQRG---------------------------------- 360
Query: 227 PLSSDTTAGTSLISMYAKCGDLKEAWELFVQIP----RKDIVSWNAMISGYAQHGAGEKA 282
L S+T +LI + + GD+ +A E F Q+ DI ++N ++ G +G EKA
Sbjct: 361 -LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKA 419
Query: 283 LHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVD 342
L +F++M+ M D +T+ V+ G V+ F + G+K Y M+
Sbjct: 420 LVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK-GLKPDIVTYTTMMS 478
Query: 343 LLGRAGRLPEAVDLIKSM 360
L G L E L M
Sbjct: 479 GLCTKGLLHEVEALYTKM 496
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 160/340 (47%), Gaps = 36/340 (10%)
Query: 7 VTWNSILSAFAKK---HGNFEQARQLFEKIPEPNTVSYNIMLA--CHLHHFGVGSARAFF 61
V +N+I+ + K + F+ +++ K PN V+Y ++ C+ + +AR
Sbjct: 191 VAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS-DAARLLS 249
Query: 62 DRMEVKDTA---SWNTMISGYAQVGLMGEASMLFAVMP----EKNCVSWSAMVSGYVACG 114
D ++ K T +++ ++ + + G + EA LF M + + V++S++++G
Sbjct: 250 DMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHD 309
Query: 115 DLDAAVECF----YAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLV----TWN 166
+D A + F + V+++ +I G+ K RVE +LFREMS + LV T+N
Sbjct: 310 RIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYN 369
Query: 167 AMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKS 226
+I G+ + G + + F M G P+ + +L G + L+ + + + K
Sbjct: 370 TLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR 429
Query: 227 PLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK----DIVSWNAMISGYAQHGAGEKA 282
+ D T++I K G ++EAW LF + K DIV++ M+SG G +
Sbjct: 430 EMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEV 489
Query: 283 LHLFDEMRHDG-MKPDW------ITFVAVL----LACNHA 311
L+ +M+ +G MK D IT A L L+C +A
Sbjct: 490 EALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYA 529
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 132/289 (45%), Gaps = 16/289 (5%)
Query: 132 ITWTAMITGYMKFGRVESAERLFREMS----LKTLVTWNAMIAGYVENGRAEDGLKLFKS 187
+T +++ G+ + RV A L +M +V +NA+I + R D FK
Sbjct: 156 VTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKE 215
Query: 188 MLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISMYAKCGD 247
+ G +PN ++ T+++ G N S ++ + K ++ + ++L+ + K G
Sbjct: 216 IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGK 275
Query: 248 LKEAWELFVQIPR----KDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITFVA 303
+ EA ELF ++ R DIV+++++I+G H ++A +FD M G D +++
Sbjct: 276 VLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNT 335
Query: 304 VLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAGRLPEAVDLIKSMPF- 362
++ A V+ G++ F M + G+ + Y ++ +AG + +A + M F
Sbjct: 336 LINGFCKAKRVEDGMKLFREMSQR-GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFF 394
Query: 363 --KPHPAIFGTLLGAC----RIHKNLDLAEFAAKNLLELDPSSATGYVQ 405
P + LLG + K L + E K ++LD + T ++
Sbjct: 395 GISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIR 443
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 121/252 (48%), Gaps = 16/252 (6%)
Query: 66 VKDTASWNTMISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSGYVACGDLDAAVE 121
V D S+NT+ISG + EA M M ++ + ++S ++ G ++ A++
Sbjct: 537 VMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQ 596
Query: 122 ----CFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTL----VTWNAMIAGYV 173
C + V T++ MI G K R E + F EM K + V +N +I Y
Sbjct: 597 FWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYC 656
Query: 174 ENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTT 233
+GR L+L + M G PN+ + TS++ G S +S ++ K + + + L +
Sbjct: 657 RSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVF 716
Query: 234 AGTSLISMYAKCGDLKEAWELFVQIPRKDI----VSWNAMISGYAQHGAGEKALHLFDEM 289
T+LI Y K G + + L ++ K++ +++ MI GYA+ G +A L +EM
Sbjct: 717 HYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 776
Query: 290 RHDGMKPDWITF 301
R G+ PD IT+
Sbjct: 777 REKGIVPDSITY 788
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/447 (22%), Positives = 192/447 (42%), Gaps = 57/447 (12%)
Query: 9 WNSILSAFAKKHGNFEQARQLFEKIPE----PNTVSYNIML----ACHLHHFGVGSARAF 60
+ + ++AF K G E+A +LF K+ E PN V++N ++ C +
Sbjct: 263 FTTAINAFCK-GGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 321
Query: 61 FDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSGYVACGDL 116
+R +++ ++ G + +G+A + M +K N + ++ ++ ++ G L
Sbjct: 322 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 381
Query: 117 DAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENG 176
+ A+E ++ ++ + SL T T+N +I GY +NG
Sbjct: 382 NKAIE------IKDLMVSKGL--------------------SL-TSSTYNTLIKGYCKNG 414
Query: 177 RAEDGLKLFKSMLESGAKPNALSLTSVL-LGCSNL---SALQLGKQVHQLVCKSPLSSDT 232
+A++ +L K ML G N S TSV+ L CS+L SAL+ V +++ ++ +S
Sbjct: 415 QADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF---VGEMLLRN-MSPGG 470
Query: 233 TAGTSLISMYAKCGDLKEAWELFVQIPRK----DIVSWNAMISGYAQHGAGEKALHLFDE 288
T+LIS K G +A EL+ Q K D + NA++ G + G ++A + E
Sbjct: 471 GLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKE 530
Query: 289 MRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAG 348
+ G D +++ ++ C +D + + MV+ G+K Y+ ++ L
Sbjct: 531 ILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR-GLKPDNYTYSILICGLFNMN 589
Query: 349 RLPEAV---DLIKSMPFKPHPAIFGTLL-GACRIHKNLDLAEFAAKNLLELDPSSATGYV 404
++ EA+ D K P + ++ G C+ + + EF + + + + Y
Sbjct: 590 KVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYN 649
Query: 405 QLANVYAAQNRWEHVARIRRSMKENKV 431
L Y R +R MK +
Sbjct: 650 HLIRAYCRSGRLSMALELREDMKHKGI 676
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/407 (19%), Positives = 167/407 (41%), Gaps = 59/407 (14%)
Query: 27 RQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVK----DTASWNTMISGYAQV 82
+++ +K PN + YN ++ + + A D M K ++++NT+I GY +
Sbjct: 354 KEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKN 413
Query: 83 GLMGEASMLFAVMPEKN------------CVSWS-------------------------- 104
G A L M C+ S
Sbjct: 414 GQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLL 473
Query: 105 -AMVSGYVACGDLDAAVECFYAAPVRSVI----TWTAMITGYMKFGRVESAERLFREM-- 157
++SG G A+E ++ + + T A++ G + G+++ A R+ +E+
Sbjct: 474 TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILG 533
Query: 158 --SLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQL 215
+ V++N +I+G + ++ M++ G KP+ + + ++ G N++ ++
Sbjct: 534 RGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEE 593
Query: 216 GKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDI----VSWNAMIS 271
Q ++ + D + +I K +E E F ++ K++ V +N +I
Sbjct: 594 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 653
Query: 272 GYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIK 331
Y + G AL L ++M+H G+ P+ T+ +++ + V+ F M R G++
Sbjct: 654 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM-RMEGLE 712
Query: 332 TKPEHYACMVDLLGRAGRLPEAVDLIKSMPFK---PHPAIFGTLLGA 375
HY ++D G+ G++ + L++ M K P+ + ++G
Sbjct: 713 PNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGG 759
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/380 (20%), Positives = 159/380 (41%), Gaps = 26/380 (6%)
Query: 5 STVTWNSILSAFAKKHGNFEQARQLFEKIP----EPNTVSYNIMLACHLHHFGVGSARAF 60
++ T+N+++ + K +G + A +L +++ N S+ ++ H SA F
Sbjct: 399 TSSTYNTLIKGYCK-NGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF 457
Query: 61 FDRMEVKDTAS----WNTMISGYAQVGLMGEASMLFAVMPEKNCV----SWSAMVSGYVA 112
M +++ + T+ISG + G +A L+ K V + +A++ G
Sbjct: 458 VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCE 517
Query: 113 CGDLDAAV----ECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTL----VT 164
G LD A E V +++ +I+G +++ A EM + L T
Sbjct: 518 AGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYT 577
Query: 165 WNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVC 224
++ +I G + E+ ++ + +G P+ + + ++ GC + G++ +
Sbjct: 578 YSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM 637
Query: 225 KSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDI----VSWNAMISGYAQHGAGE 280
+ +T LI Y + G L A EL + K I ++ ++I G + E
Sbjct: 638 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 697
Query: 281 KALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACM 340
+A LF+EMR +G++P+ + A++ G + + V+ + + Y M
Sbjct: 698 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQM-VKVECLLREMHSKNVHPNKITYTVM 756
Query: 341 VDLLGRAGRLPEAVDLIKSM 360
+ R G + EA L+ M
Sbjct: 757 IGGYARDGNVTEASRLLNEM 776
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 16/187 (8%)
Query: 36 PNTVSYNIMLACHLHHFGVGSARAFFDRMEVKD----TASWNTMISGYAQVGLMGEASML 91
P+ +Y++M+ + FFD M K+ T +N +I Y + G + A L
Sbjct: 608 PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL 667
Query: 92 FAVMPEK----NCVSWSAMVSGYVACGDLDAAVECFYAAPVR----SVITWTAMITGYMK 143
M K N ++++++ G ++ A F + +V +TA+I GY K
Sbjct: 668 REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGK 727
Query: 144 FGRVESAERLFREMSLKTL----VTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALS 199
G++ E L REM K + +T+ MI GY +G + +L M E G P++++
Sbjct: 728 LGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSIT 787
Query: 200 LTSVLLG 206
+ G
Sbjct: 788 YKEFIYG 794
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 121/252 (48%), Gaps = 16/252 (6%)
Query: 66 VKDTASWNTMISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSGYVACGDLDAAVE 121
V D S+NT+ISG + EA M M ++ + ++S ++ G ++ A++
Sbjct: 537 VMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQ 596
Query: 122 ----CFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTL----VTWNAMIAGYV 173
C + V T++ MI G K R E + F EM K + V +N +I Y
Sbjct: 597 FWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYC 656
Query: 174 ENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTT 233
+GR L+L + M G PN+ + TS++ G S +S ++ K + + + L +
Sbjct: 657 RSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVF 716
Query: 234 AGTSLISMYAKCGDLKEAWELFVQIPRKDI----VSWNAMISGYAQHGAGEKALHLFDEM 289
T+LI Y K G + + L ++ K++ +++ MI GYA+ G +A L +EM
Sbjct: 717 HYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 776
Query: 290 RHDGMKPDWITF 301
R G+ PD IT+
Sbjct: 777 REKGIVPDSITY 788
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/447 (22%), Positives = 192/447 (42%), Gaps = 57/447 (12%)
Query: 9 WNSILSAFAKKHGNFEQARQLFEKIPE----PNTVSYNIML----ACHLHHFGVGSARAF 60
+ + ++AF K G E+A +LF K+ E PN V++N ++ C +
Sbjct: 263 FTTAINAFCK-GGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 321
Query: 61 FDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSGYVACGDL 116
+R +++ ++ G + +G+A + M +K N + ++ ++ ++ G L
Sbjct: 322 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 381
Query: 117 DAAVECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTLVTWNAMIAGYVENG 176
+ A+E ++ ++ + SL T T+N +I GY +NG
Sbjct: 382 NKAIE------IKDLMVSKGL--------------------SL-TSSTYNTLIKGYCKNG 414
Query: 177 RAEDGLKLFKSMLESGAKPNALSLTSVL-LGCSNL---SALQLGKQVHQLVCKSPLSSDT 232
+A++ +L K ML G N S TSV+ L CS+L SAL+ V +++ ++ +S
Sbjct: 415 QADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF---VGEMLLRN-MSPGG 470
Query: 233 TAGTSLISMYAKCGDLKEAWELFVQIPRK----DIVSWNAMISGYAQHGAGEKALHLFDE 288
T+LIS K G +A EL+ Q K D + NA++ G + G ++A + E
Sbjct: 471 GLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKE 530
Query: 289 MRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACMVDLLGRAG 348
+ G D +++ ++ C +D + + MV+ G+K Y+ ++ L
Sbjct: 531 ILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR-GLKPDNYTYSILICGLFNMN 589
Query: 349 RLPEAV---DLIKSMPFKPHPAIFGTLL-GACRIHKNLDLAEFAAKNLLELDPSSATGYV 404
++ EA+ D K P + ++ G C+ + + EF + + + + Y
Sbjct: 590 KVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYN 649
Query: 405 QLANVYAAQNRWEHVARIRRSMKENKV 431
L Y R +R MK +
Sbjct: 650 HLIRAYCRSGRLSMALELREDMKHKGI 676
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/407 (19%), Positives = 167/407 (41%), Gaps = 59/407 (14%)
Query: 27 RQLFEKIPEPNTVSYNIMLACHLHHFGVGSARAFFDRMEVK----DTASWNTMISGYAQV 82
+++ +K PN + YN ++ + + A D M K ++++NT+I GY +
Sbjct: 354 KEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKN 413
Query: 83 GLMGEASMLFAVMPEKN------------CVSWS-------------------------- 104
G A L M C+ S
Sbjct: 414 GQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLL 473
Query: 105 -AMVSGYVACGDLDAAVECFYAAPVRSVI----TWTAMITGYMKFGRVESAERLFREM-- 157
++SG G A+E ++ + + T A++ G + G+++ A R+ +E+
Sbjct: 474 TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILG 533
Query: 158 --SLKTLVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQL 215
+ V++N +I+G + ++ M++ G KP+ + + ++ G N++ ++
Sbjct: 534 RGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEE 593
Query: 216 GKQVHQLVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDI----VSWNAMIS 271
Q ++ + D + +I K +E E F ++ K++ V +N +I
Sbjct: 594 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 653
Query: 272 GYAQHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIK 331
Y + G AL L ++M+H G+ P+ T+ +++ + V+ F M R G++
Sbjct: 654 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM-RMEGLE 712
Query: 332 TKPEHYACMVDLLGRAGRLPEAVDLIKSMPFK---PHPAIFGTLLGA 375
HY ++D G+ G++ + L++ M K P+ + ++G
Sbjct: 713 PNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGG 759
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/380 (20%), Positives = 159/380 (41%), Gaps = 26/380 (6%)
Query: 5 STVTWNSILSAFAKKHGNFEQARQLFEKIP----EPNTVSYNIMLACHLHHFGVGSARAF 60
++ T+N+++ + K +G + A +L +++ N S+ ++ H SA F
Sbjct: 399 TSSTYNTLIKGYCK-NGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRF 457
Query: 61 FDRMEVKDTAS----WNTMISGYAQVGLMGEASMLFAVMPEKNCV----SWSAMVSGYVA 112
M +++ + T+ISG + G +A L+ K V + +A++ G
Sbjct: 458 VGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCE 517
Query: 113 CGDLDAAV----ECFYAAPVRSVITWTAMITGYMKFGRVESAERLFREMSLKTL----VT 164
G LD A E V +++ +I+G +++ A EM + L T
Sbjct: 518 AGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYT 577
Query: 165 WNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVC 224
++ +I G + E+ ++ + +G P+ + + ++ GC + G++ +
Sbjct: 578 YSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM 637
Query: 225 KSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRKDI----VSWNAMISGYAQHGAGE 280
+ +T LI Y + G L A EL + K I ++ ++I G + E
Sbjct: 638 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 697
Query: 281 KALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEHYACM 340
+A LF+EMR +G++P+ + A++ G + + V+ + + Y M
Sbjct: 698 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQM-VKVECLLREMHSKNVHPNKITYTVM 756
Query: 341 VDLLGRAGRLPEAVDLIKSM 360
+ R G + EA L+ M
Sbjct: 757 IGGYARDGNVTEASRLLNEM 776
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 16/187 (8%)
Query: 36 PNTVSYNIMLACHLHHFGVGSARAFFDRMEVKD----TASWNTMISGYAQVGLMGEASML 91
P+ +Y++M+ + FFD M K+ T +N +I Y + G + A L
Sbjct: 608 PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL 667
Query: 92 FAVMPEK----NCVSWSAMVSGYVACGDLDAAVECFYAAPVR----SVITWTAMITGYMK 143
M K N ++++++ G ++ A F + +V +TA+I GY K
Sbjct: 668 REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGK 727
Query: 144 FGRVESAERLFREMSLKTL----VTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALS 199
G++ E L REM K + +T+ MI GY +G + +L M E G P++++
Sbjct: 728 LGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSIT 787
Query: 200 LTSVLLG 206
+ G
Sbjct: 788 YKEFIYG 794
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 187/418 (44%), Gaps = 48/418 (11%)
Query: 7 VTWNSILSAFAKKHGNFEQARQLFEKIPE----PNTVSYNIMLACHLHHFGVGSARA--- 59
+T+N+++ F K G ++A ++FE + E PN +Y ++ GVG +
Sbjct: 283 ITYNTLIRGFCK-LGQLKEASEIFEFMIERGVRPNVYTYTGLID---GLCGVGKTKEALQ 338
Query: 60 ----FFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSGYV 111
++ E + ++N +I+ + GL+ +A + +M ++ + ++++ ++ G
Sbjct: 339 LLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLC 398
Query: 112 ACGDLDAAVECFYAAPVRS------VITWTAMITGYMKFGRVESA----ERLFREMSLKT 161
A GDLD A + Y S VI++ A+I G K R+ A + L ++
Sbjct: 399 AKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGD 458
Query: 162 LVTWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQ 221
VT N ++ ++ G ++L+K + +S N+ + T+++ G L + K
Sbjct: 459 RVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKG--- 515
Query: 222 LVCK---SPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK----DIVSWNAMISGYA 274
L+CK S L L+S K G L +AW LF ++ R D+VS+N MI G
Sbjct: 516 LLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSL 575
Query: 275 QHGAGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKP 334
+ G + A L M G+ PD T+ ++ G +D + +F+ MV D G +P
Sbjct: 576 KAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMV-DSGF--EP 632
Query: 335 EHYACMVDL-----LGRAGRLPEAVDLIKSMPFKPHPAIFGTLLG-ACRIHKNLDLAE 386
+ + C L G +L E V + + T++ C N+DLA+
Sbjct: 633 DAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAK 690
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 96/454 (21%), Positives = 188/454 (41%), Gaps = 86/454 (18%)
Query: 10 NSILSAFAKKHGNFEQARQLFEKIPEPNT----VSYNIMLACHLHH----FGVGSARAFF 61
N++++ + N E A + K+ E +T VS + +L C++ F G
Sbjct: 76 NNLMAKLVRSR-NHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALML 134
Query: 62 DRMEVKDTASWNTMISGYAQVGLMGEASMLF------AVMPEKNCVSWSAMVSGYVACGD 115
R + + N ++ G + G+A L ++MP+ S++ ++ G+ +
Sbjct: 135 KRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPD--VFSYNTVIRGFCEGKE 192
Query: 116 LDAAVECFYAAPVR------SVITWTAMITGYMKFGRVESAERLFREMSL----KTLVTW 165
L+ A+E A ++ S++TW +I + K G+++ A +EM LV +
Sbjct: 193 LEKALE--LANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVY 250
Query: 166 NAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCK 225
++I G+ + G + G LF +LE G P A++ +++ G
Sbjct: 251 TSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRG------------------- 291
Query: 226 SPLSSDTTAGTSLISMYAKCGDLKEAWELFVQI----PRKDIVSWNAMISGYAQHGAGEK 281
+ K G LKEA E+F + R ++ ++ +I G G ++
Sbjct: 292 ----------------FCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKE 335
Query: 282 ALHLFDEMRHDGMKPDWITFVAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPEH--YAC 339
AL L + M +P+ +T+ ++ GLV V+ +M + +T+P++ Y
Sbjct: 336 ALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKR---RTRPDNITYNI 392
Query: 340 MVDLLGRAGRLPEAVDLI-----KSMPFKPHPAIFGTLL-GAC---RIHKNLDLAEFAAK 390
++ L G L EA L+ S P + L+ G C R+H+ LD+ + +
Sbjct: 393 LLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVE 452
Query: 391 NLLELDPSSA----TGYVQLANVYAAQNRWEHVA 420
L D + ++ +V A W+ ++
Sbjct: 453 KLGAGDRVTTNILLNSTLKAGDVNKAMELWKQIS 486
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 154/335 (45%), Gaps = 26/335 (7%)
Query: 2 KVKSTVTWNSILSAFAKKHGNFEQARQLFEKIP----EPNTVSYNIMLA--CHLHHFGVG 55
K+K SI+ K G+ + A LF ++ + + + Y ++ C+ + G
Sbjct: 242 KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDG 301
Query: 56 SA--RAFFDRMEVKDTASWNTMISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSG 109
+ R R D +++ +I + + G + EA L M ++ + V++++++ G
Sbjct: 302 AKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDG 361
Query: 110 YVACGDLDAAVECFYAAPVR----SVITWTAMITGYMKFGRVESAERLFREMSLKTLV-- 163
+ LD A + ++ T+ +I GY K ++ LFR+MSL+ +V
Sbjct: 362 FCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVAD 421
Query: 164 --TWNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQ 221
T+N +I G+ E G+ E +LF+ M+ +P+ +S +L G + + ++ +
Sbjct: 422 TVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFE 481
Query: 222 LVCKSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIPRK----DIVSWNAMISGYAQHG 277
+ KS + D +I + +AW+LF +P K D+ ++N MI G + G
Sbjct: 482 KIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKG 541
Query: 278 AGEKALHLFDEMRHDGMKPDWITFVAVLLACNHAG 312
+ +A LF +M DG P+ T+ ++ A H G
Sbjct: 542 SLSEADLLFRKMEEDGHSPNGCTYNILIRA--HLG 574
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 174/386 (45%), Gaps = 28/386 (7%)
Query: 5 STVTWNSILSAFAKKHGNFEQARQLFEKIPE----PNTVSYNIMLACHLHHFGVGSARAF 60
+ +T N++++ +G A L +++ E PN V+Y +L A
Sbjct: 176 TLITLNALVNGLCL-NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 61 FDRMEVK----DTASWNTMISGYAQVGLMGEASMLFAVMPEK----NCVSWSAMVSGYVA 112
+ME + D ++ +I G + G + A LF M K + + ++ ++ G+
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294
Query: 113 CGDLDAAVECFYAAPVR----SVITWTAMITGYMKFGRVESAERLFREMSLKTL----VT 164
G D + R V+ ++A+I ++K G++ AE L +EM + + VT
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVT 354
Query: 165 WNAMIAGYVENGRAEDGLKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVC 224
+ ++I G+ + + + + M+ G PN + ++ G + + G ++ + +
Sbjct: 355 YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS 414
Query: 225 KSPLSSDTTAGTSLISMYAKCGDLKEAWELFVQIP----RKDIVSWNAMISGYAQHGAGE 280
+ +DT +LI + + G L+ A ELF ++ R DIVS+ ++ G +G E
Sbjct: 415 LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPE 474
Query: 281 KALHLFDEMRHDGMKPDWITFVAVLLA-CNHAGLVDLGVQYFNMMVRDFGIKTKPEHYAC 339
KAL +F+++ M+ D + ++ CN + + D + ++ ++ G+K + Y
Sbjct: 475 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK--GVKPDVKTYNI 532
Query: 340 MVDLLGRAGRLPEAVDLIKSMPFKPH 365
M+ L + G L EA L + M H
Sbjct: 533 MIGGLCKKGSLSEADLLFRKMEEDGH 558
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 102/422 (24%), Positives = 181/422 (42%), Gaps = 70/422 (16%)
Query: 66 VKDTASWNTMISGYAQVGLMGEASMLFAVMPEKNCVSWSAMVSGYVACGDLDAAVECFYA 125
V T ++ ++ Q+ L G A L+ + NC +S +A + ++ Y
Sbjct: 82 VARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLS--LAFSAMGKIIKLGYE 139
Query: 126 APVRSVITWTAMITGYMKFGRVESAERLFR---EMSLK-TLVTWNAMIAGYVENGRAEDG 181
+T++ +I G GRV A L EM K TL+T NA++ G NG+ D
Sbjct: 140 P---DTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDA 196
Query: 182 LKLFKSMLESGAKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKSPLSSDTTAGTSLISM 241
+ L M+E+G +PN ++ VL +++CKS G + ++M
Sbjct: 197 VLLIDRMVETGFQPNEVTYGPVL----------------KVMCKS--------GQTALAM 232
Query: 242 YAKCGDLKEAWELFVQIPRKDIVSWNAMISGYAQHGAGEKALHLFDEMRHDGMKPDWITF 301
L++ E +++ D V ++ +I G + G+ + A +LF+EM G K D I +
Sbjct: 233 EL----LRKMEERKIKL---DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIY 285
Query: 302 VAVLLACNHAGLVDLGVQYFNMMVRDFGIKTKPE--HYACMVDLLGRAGRLPEAVDLIKS 359
++ +AG D G + M++ K P+ ++ ++D + G+L EA +L K
Sbjct: 286 TTLIRGFCYAGRWDDGAKLLRDMIKR---KITPDVVAFSALIDCFVKEGKLREAEELHKE 342
Query: 360 M---PFKPHPAIFGTLL-GACRIHKNLDLAEFAAKNLLELDPSSATG-----YVQLANVY 410
M P + +L+ G C+ LD A ++L+L S G + L N Y
Sbjct: 343 MIQRGISPDTVTYTSLIDGFCK-ENQLD----KANHMLDLMVSKGCGPNIRTFNILINGY 397
Query: 411 AAQNRWEHVARIRRSMKENKVVK--------APGY---SWIEISSEVHEFRSSDRLHPEL 459
N + + R M VV G+ +E++ E+ + S R+ P++
Sbjct: 398 CKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDI 457
Query: 460 AS 461
S
Sbjct: 458 VS 459