Miyakogusa Predicted Gene

Lj0g3v0303369.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0303369.1 tr|E2FKI7|E2FKI7_SOYBN Sieve element occlusion p
OS=Glycine max GN=SEOp PE=2 SV=1,79.88,0,coiled-coil,NULL,CUFF.20396.1
         (673 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G01680.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Mediator c...   177   3e-44
AT3G01670.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...   139   5e-33
AT1G67790.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...    67   5e-11

>AT3G01680.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Mediator
           complex subunit Med28 (InterPro:IPR021640); BEST
           Arabidopsis thaliana protein match is: unknown protein
           (TAIR:AT3G01670.1); Has 122 Blast hits to 112 proteins
           in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0;
           Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes -
           0 (source: NCBI BLink). | chr3:252033-255246 FORWARD
           LENGTH=740
          Length = 740

 Score =  177 bits (448), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 153/627 (24%), Positives = 284/627 (45%), Gaps = 60/627 (9%)

Query: 90  LSAKLKRIACQMICTARGDHYAHHTTMLILEQLKSYSWDAKALIVQAAFALEYGKFLFLP 149
           +S  + R+AC++   +     +H  TM + E L S+ WD K ++  AAFAL YG+F  L 
Sbjct: 106 VSYAIDRVACEIAYKSLTGSDSHEITMSVFEHLSSFQWDGKLVLTLAAFALNYGEFWLLV 165

Query: 150 QI-PKYPVERSLAELNGLLLIHQNTQHLIY--FSSVVKKVMQVIECITEWKRLTSAGYDI 206
           Q   K  + +SLA L  + + ++ T   +    + +++++  V  C+ E   L    Y  
Sbjct: 166 QFYSKNQLAKSLAMLKLVPVQNRVTLESVSQGLNDLIREMKSVTACVVELSELPDR-YIT 224

Query: 207 KDVPALSDTLHEIPVVVYWAIFTFVTCTGQLDDFTTDNKGQRHEL---------SKNFEN 257
            DVP LS  L  IP+ VYW I + + C  Q++  T       HE+         +    N
Sbjct: 225 PDVPQLSRILSTIPIAVYWTIRSVIACISQINMIT----AMGHEMMNTQMDLWETSMLAN 280

Query: 258 KLDIILRSFKEHLEECSKQI---GAIEDYTRRRNIVIHTGKDIVKVLKALIVSGDNRESR 314
           KL  I     E L  C + I    + E      ++   T  D +K+L AL+    +    
Sbjct: 281 KLKNIHDHLAETLRLCYRHIEKQRSSESLKVLHSLFDTTHIDNMKILTALVHPKPHITPL 340

Query: 315 QLVHNGLTGEQVRIEEFKKKHVLLFISGLENIEDETQLLRSIFEKLKDNPKEVEGYRKDD 374
           Q   +GLT  +V ++  ++K VLL IS L  ++DE  +   I+ + + N   V+G     
Sbjct: 341 Q---DGLTKRKVHLDVLRRKTVLLLISDLNILQDELSIFEQIYTESRRNLVGVDGKSHMP 397

Query: 375 FKILWIPIVDEWND-RYKKMLESHLQ--RTKIGWYVVKDFRFPTG--IKLIREVFNYKDR 429
           ++++W+P+VD   D     +L+   +  R  + WY V   +      ++ +R  +++ ++
Sbjct: 398 YEVVWVPVVDPIEDFERSPILQKKFEDLRDPMPWYSVDSPKLIERHVVEFMRGRWHFMNK 457

Query: 430 AVIPLISPEGKVENIDTKNIISVWGIDGFPFRTSDHTRLTQQWNWFWAEMTK-LNPKIGD 488
            ++ +I P+G   +++  ++I +WG + FPF  S    L ++  +    +   ++  I +
Sbjct: 458 PILVVIDPQGNEASLNALHMIWIWGTEAFPFTRSREEELWRRETFSLNLIVDGIDSVIFN 517

Query: 489 LIEEDCYLFIYGGTDSKWMQEITSAVETMKRQIETVLQLD-------------------I 529
            I+ D Y+F+YGG D  W++  T A +   +     L++                    I
Sbjct: 518 WIKPDNYIFLYGGDDLDWIRRFTMAAKATAKDSNVNLEMAYVGKRNHSHREQIRRISEVI 577

Query: 530 TIEPYPLGKDDPKVVPRFWIAIDSLFASRKQKKGGDQGVQDFATREIKRLLFLKQDPKGW 589
             E       +P ++  FW  ++S+  S+ Q    D    D   + IK++L   +   GW
Sbjct: 578 RSENLSHSWAEPALMWFFWTRLESMLYSKIQLGKADD--HDDVMQGIKKILSYDK-LGGW 634

Query: 590 VILSRGSNVKLLGQGEAMYHTVKDFE-IWHGKLHQDV-SFDVAFKEYYEGIKAKKIGQKC 647
            +LS+G  + ++  G A+  T+  ++  W  K H     +  A  +++     ++ G+ C
Sbjct: 635 ALLSKGPEIVMIAHG-AIERTMSVYDRTW--KTHVPTKGYTKAMSDHHHDEVLRETGKPC 691

Query: 648 EHSE--IADYPTDILARINCPNMDCGR 672
            H +  I      I  ++NC   +C R
Sbjct: 692 GHFDFHITARSGRIPEKMNC--FECQR 716


>AT3G01670.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT3G01680.1); Has 121 Blast hits to 111 proteins
           in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0;
           Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes -
           0 (source: NCBI BLink). | chr3:247288-250261 FORWARD
           LENGTH=822
          Length = 822

 Score =  139 bits (351), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 158/667 (23%), Positives = 285/667 (42%), Gaps = 112/667 (16%)

Query: 23  FEFNDEQIL-ESVYRTHFHCVDKFDVGSLYCVASKVINHSIEITDTMIAKAGQLSDQFRE 81
           F  +D++++ + V +TH   +  FDV SL  V + +    +   D+   K   +   + +
Sbjct: 134 FSLSDDRVMADRVLKTHSPDMIFFDVTSLLSVVNDIFKSHVPSIDSSAPKPSLVFKDYAD 193

Query: 82  ETSFTSQQLSAKLKRIACQMICTARGDHYAH-------------HTTMLILEQLKSYSWD 128
            TSF  +  +  + +I+C++ C       +H              TT  +L  +  Y WD
Sbjct: 194 HTSF--ETFADLIDQISCEIDCKCLHGGESHGMMTSGLHLDSRNTTTFSVLSLVSKYRWD 251

Query: 129 AKALIVQAAFALEYGKFLFLPQI-PKYPVERSLAELNGLLLIHQNTQHLIYFSSVVKKVM 187
           AK ++V +A A++YG FL L +      + +SLA +  L  I      L       + +M
Sbjct: 252 AKLVLVLSALAVKYGVFLLLAETHATNQLTKSLALIKQLPSIFSRQNALHQRLDKTRILM 311

Query: 188 QVIECITEWKRLTSAGYDIKDVP------ALSDTLHEIPVVVYWAIFTFVTCTGQL---D 238
           Q      +   LT+   DI  +P      A +D    IP  VYW +   + C   +    
Sbjct: 312 Q------DMVDLTTTIIDIYQLPPNHITAAFTD---HIPTAVYWIVRCVLICVSHISGAS 362

Query: 239 DFTTDNKGQRHELSKNFENKLDIILRSFKEHLEECSKQ----------IGAIEDYTRRRN 288
            F  D      E+S+  EN     LR    +L E  K+              ++  +   
Sbjct: 363 GFKQDQIMSFMEVSEIHENSER--LRKINAYLLEQFKKSKMTIEEGIIEEEYQELIQTFT 420

Query: 289 IVIHTGKDIVKVLKALIVSGDNRESRQLVHN-GLTGEQVRIEEFKKKHVLLFISGLENIE 347
            +IH   D+V  L  L+     R    L H  G++  +V I    +KHVLL IS LENIE
Sbjct: 421 TIIHV--DVVPPLLRLL-----RPIDFLYHGAGVSKRRVGINVLTQKHVLLLISDLENIE 473

Query: 348 DETQLLRSIFEKLKDNPKEVEGYRKDDFKILWIPIVDEWNDRYKKMLESHLQRTKIGWYV 407
            E  +L S++          E +++  F+ILW+P+ D W +      E+      + WYV
Sbjct: 474 KELYILESLY---------TEAWQQ-SFEILWVPVQDFWTEADDAKFEA--LHMNMRWYV 521

Query: 408 VKDFR--FPTGIKLIREVFNYKDRAVIPLISPEGKVENIDTKNIISVWGIDGFPFRTSDH 465
           + + R      I+ +RE + +K+R ++  + P+G+V + +   ++ +W     PF T+  
Sbjct: 522 LGEPRKLRRAAIRFVREWWGFKNRPILVALDPKGQVMSTNAFPMVWIWQPFAHPFTTARE 581

Query: 466 TRL--TQQWNW-FWAEMTKLNPKIGDLIEEDCYLFIYGGTDSKWMQEITSAVETMKRQIE 522
             L   Q+WN  F  + T  +P   + + +  Y+ +YGG D +W++  TS    + +   
Sbjct: 582 RDLWSEQEWNLEFLIDGT--DPHSLNQLVDGKYICLYGGEDMQWIKNFTSLWRNVAKAA- 638

Query: 523 TVLQLDITIEPYPLGKDDPK-----------------VVPR------FWIAIDSLFASR- 558
                +I +E   +GK +PK                  +P       FW  ++S++ S+ 
Sbjct: 639 -----NIQLEMVYVGKRNPKNGIQPIINTIREENLSHTLPDLFQIWFFWTRVESMWESKQ 693

Query: 559 --------KQKKGGDQGVQDFATREIKRLLFLKQDPKGWVILSRGSNVKLLGQGEAMYHT 610
                   K ++G  +  +D   +E+  +L    +  GW ++S+ S++ +  +G      
Sbjct: 694 RMLKAHGIKGREGFKEEEKDLVLQEVVAMLGYGGEGDGWGLVSKASDMMVRAKGNLFSRG 753

Query: 611 VKDFEIW 617
           + +F  W
Sbjct: 754 LAEFNEW 760


>AT1G67790.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT3G01680.1); Has 208 Blast hits to 125 proteins
           in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0;
           Fungi - 0; Plants - 208; Viruses - 0; Other Eukaryotes -
           0 (source: NCBI BLink). | chr1:25417542-25420099 REVERSE
           LENGTH=576
          Length = 576

 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 81/159 (50%), Gaps = 7/159 (4%)

Query: 86  TSQQLSAKLKRIACQMICTARGDHYAHHTTMLILEQLKSYSWDAKALIVQAAFALEYGKF 145
           + + L   + RI+ QM+C   G++     TM++ + LK Y WDAKA++V    A  YG  
Sbjct: 69  SKETLPYAIFRISVQMLCPCTGENEIRKRTMVLFDLLKEYRWDAKAVLVLGVLAATYGGL 128

Query: 146 LFLPQIPKY-PVERSLAELNGLLLIHQNTQHLIYFSS---VVKKVMQVIECITEWKRLTS 201
           L    +    PV  S+A+LN L +  + T+   +  S   ++K ++ V +CI +++++  
Sbjct: 129 LLPVHLAICDPVAASIAKLNQLPI--ERTKFRPWLESLNLLIKAMVDVTKCIIKFEKIPF 186

Query: 202 AGYDIKDVPALSDTLHEIPVVVYWAIFTFVTCTGQLDDF 240
               + D   L +TL  I +  Y  + + +TC  Q+  F
Sbjct: 187 KQAKL-DNNILGETLSNIYLTTYRVVKSALTCMQQIPYF 224



 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 77/348 (22%), Positives = 154/348 (44%), Gaps = 40/348 (11%)

Query: 324 EQVRIEEFKKKHVLLFISGLENIEDETQLLRSIFEKLKDNPKEVEGYRKDDFKILWIPIV 383
           +Q+ I E + K  LL +S     +   + L  + ++L D+P       + +++I+W+PI 
Sbjct: 228 QQISITEVQDKVTLLLLS-----KPPVEPLFFLLQQLYDHPSNTNT--EQNYEIIWVPIP 280

Query: 384 D--EWNDRYKKMLESHLQRTKIGWYVVKD--FRFPTGIKLIREVFNYKD-RAVIPLISPE 438
              +W D  K++ + +     + W  V+       T +   ++ ++YKD  A++ +I   
Sbjct: 281 SSQKWTDEEKEIFDFY--SNSLPWISVRQPWLMSSTILNFFKQEWHYKDNEAMLVVIDSN 338

Query: 439 GKVENIDTKNIISVWGIDGFPFRTSDHTRLTQQWNWFWAEMTKLNPKIGDLIE--EDCYL 496
           G+  N++  +++ +WG+  +PF  S    L ++  W    +  L   I    E  E C  
Sbjct: 339 GRFVNMNAMDMVLIWGVKAYPFSVSREDELWKEHGW---SINLLLDGIHPTFEGREIC-- 393

Query: 497 FIYGGTDSKWMQEITS---AVETMKRQIETVLQLDITIEPYPLGKD----DPKVVPRFWI 549
            I+G  +  W+ E  S    ++ +  Q+E +   +   +   + +      P +   FW+
Sbjct: 394 -IFGSENLDWIDEFVSLARKIQNLGFQLELIYLSNQRRDERAMEESSILFSPTLQQLFWL 452

Query: 550 AIDSLFASRKQKKGGDQGVQDFATREIKRLL-FLKQDPKGWVILSRGSNVKLLGQGEAMY 608
            ++S+  S+ ++   +    D    E++ LL F     +GW I+  GS  + +  GE M 
Sbjct: 453 RLESIERSKLKRIVIEPSKPDRVFEEVRNLLDFDYGKHRGWGIIGNGSTAETV-DGEKMT 511

Query: 609 HTVKDFEIWHGKLHQDVSFDVAFKEYYEGIKAKKIGQKCEHSEIADYP 656
             ++    W G+  + + F  A +     I A+K    CE S  A  P
Sbjct: 512 ERMRKIVRW-GEYAKGLGFTEAIE-----IAAEK---PCELSHTAVVP 550