Miyakogusa Predicted Gene

Lj0g3v0303129.5
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0303129.5 Non Chatacterized Hit- tr|B9SVH8|B9SVH8_RICCO
Cystathionine gamma-synthase, putative (Fragment) OS=R,81.48,3e-18,no
description,Pyridoxal phosphate-dependent transferase, major region,
subdomain 1; CYSTATHIONINE G,CUFF.20376.5
         (81 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G01120.1 | Symbols: MTO1, CGS, ATCYS1, CGS1 | Pyridoxal phosp...    92   1e-19
AT1G33320.1 | Symbols:  | Pyridoxal phosphate (PLP)-dependent tr...    86   5e-18

>AT3G01120.1 | Symbols: MTO1, CGS, ATCYS1, CGS1 | Pyridoxal
           phosphate (PLP)-dependent transferases superfamily
           protein | chr3:39234-41865 REVERSE LENGTH=563
          Length = 563

 Score = 91.7 bits (226), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/55 (74%), Positives = 47/55 (85%)

Query: 27  KVPLFFTESPTNPFLRCVDIKLVSELCHRNGALVCIDGTFASLLNQKVLILVSTL 81
           KV LFFTESPTNPFLRCVDI+LVS++CH+ G LVCIDGTFA+ LNQK L L + L
Sbjct: 318 KVSLFFTESPTNPFLRCVDIELVSKICHKRGTLVCIDGTFATPLNQKALALGADL 372



 Score = 53.9 bits (128), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/40 (62%), Positives = 32/40 (80%), Gaps = 1/40 (2%)

Query: 1   MKMLHLCVQQQNSTALRMAKLLEAHPKVP-LFFTESPTNP 39
           MK LHL VQQQNSTA RMA++LEAHPKV  +++   P++P
Sbjct: 425 MKTLHLRVQQQNSTAFRMAEILEAHPKVSHVYYPGLPSHP 464


>AT1G33320.1 | Symbols:  | Pyridoxal phosphate (PLP)-dependent
           transferases superfamily protein |
           chr1:12081009-12083462 FORWARD LENGTH=412
          Length = 412

 Score = 85.9 bits (211), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 39/55 (70%), Positives = 45/55 (81%)

Query: 27  KVPLFFTESPTNPFLRCVDIKLVSELCHRNGALVCIDGTFASLLNQKVLILVSTL 81
           +V LFFTESPTNPFLRCVDIKLVS++CHR G LVCID T A+ +NQK L L + L
Sbjct: 168 EVSLFFTESPTNPFLRCVDIKLVSKICHRRGTLVCIDATIATPINQKTLALGADL 222



 Score = 48.1 bits (113), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/40 (52%), Positives = 32/40 (80%), Gaps = 1/40 (2%)

Query: 1   MKMLHLCVQQQNSTALRMAKLLEAHPKVP-LFFTESPTNP 39
           MK +HL V+QQNST ++MA++LEAHPKV  +++   P++P
Sbjct: 275 MKTMHLRVRQQNSTGMKMAQVLEAHPKVSRVYYLGLPSHP 314