Miyakogusa Predicted Gene

Lj0g3v0303059.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0303059.1 tr|G7KT01|G7KT01_MEDTR Importin-7 OS=Medicago
truncatula GN=MTR_7g021500 PE=4 SV=1,94.92,0,no
description,Armadillo-like helical; Cse1,Exportin/Importin, Cse1-like;
IMPORTIN 7, 8 (IMP7, 8) (R,CUFF.20388.1
         (280 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G59020.1 | Symbols:  | ARM repeat superfamily protein | chr3:...   463   e-131
AT3G59020.2 | Symbols:  | ARM repeat superfamily protein | chr3:...   463   e-131
AT2G31660.1 | Symbols: SAD2, URM9 | ARM repeat superfamily prote...   449   e-127
AT3G17340.1 | Symbols:  | ARM repeat superfamily protein | chr3:...    53   2e-07
AT3G17340.2 | Symbols:  | ARM repeat superfamily protein | chr3:...    53   2e-07

>AT3G59020.1 | Symbols:  | ARM repeat superfamily protein |
           chr3:21810973-21817418 REVERSE LENGTH=1029
          Length = 1029

 Score =  463 bits (1192), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 215/256 (83%), Positives = 234/256 (91%)

Query: 1   MILFLNVLERPVPLEGQPMDPELRKSWGWWKVKKWTVHILNRLYTRFGDLKLQNPENKAF 60
           M LFLN+LERPVP+EGQP DPELRKSWGWWK KKW  HILNRLYTRFGDLKLQNP+NKAF
Sbjct: 226 MGLFLNILERPVPVEGQPEDPELRKSWGWWKAKKWIAHILNRLYTRFGDLKLQNPDNKAF 285

Query: 61  AQMFQKHYAGKILECHLNLLNVIRVGGYLPDRVINLILQYLSNSISRNSMYTLLQPRLDV 120
           AQMFQ +YA KILECHL LLN IR+GGYLPDRVINLILQYLSNSIS++SMY LLQP L+ 
Sbjct: 286 AQMFQINYAAKILECHLKLLNAIRIGGYLPDRVINLILQYLSNSISKSSMYNLLQPHLNT 345

Query: 121 LLFEIVFPLMCFNDNDQKLWEEDPHEYVRKGYDIIEDLYSPRTASMDFVSELVRKRGKEN 180
           LLFEIVFPLMCFNDNDQ LW+EDPHEYVRKGYDIIEDLYSPRTASMDFV+ELVRKRGKEN
Sbjct: 346 LLFEIVFPLMCFNDNDQMLWDEDPHEYVRKGYDIIEDLYSPRTASMDFVTELVRKRGKEN 405

Query: 181 LHKFIQFIVEIFRRYDEASIEYKPYRQKDGALLAIGALCDKLKQSEPYKSELERMLVQHV 240
             KFIQF+V+IF+RY+EAS+E KPYR KDGALLA+G LCDKL+Q+EPYKSELE MLVQHV
Sbjct: 406 FPKFIQFVVDIFKRYNEASLENKPYRLKDGALLAVGTLCDKLRQTEPYKSELENMLVQHV 465

Query: 241 FPEFNSPVGHLRAKVC 256
           FPEF+SP GHLRAK  
Sbjct: 466 FPEFSSPAGHLRAKAA 481


>AT3G59020.2 | Symbols:  | ARM repeat superfamily protein |
           chr3:21810973-21817418 REVERSE LENGTH=1030
          Length = 1030

 Score =  463 bits (1191), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 215/256 (83%), Positives = 234/256 (91%)

Query: 1   MILFLNVLERPVPLEGQPMDPELRKSWGWWKVKKWTVHILNRLYTRFGDLKLQNPENKAF 60
           M LFLN+LERPVP+EGQP DPELRKSWGWWK KKW  HILNRLYTRFGDLKLQNP+NKAF
Sbjct: 226 MGLFLNILERPVPVEGQPEDPELRKSWGWWKAKKWIAHILNRLYTRFGDLKLQNPDNKAF 285

Query: 61  AQMFQKHYAGKILECHLNLLNVIRVGGYLPDRVINLILQYLSNSISRNSMYTLLQPRLDV 120
           AQMFQ +YA KILECHL LLN IR+GGYLPDRVINLILQYLSNSIS++SMY LLQP L+ 
Sbjct: 286 AQMFQINYAAKILECHLKLLNAIRIGGYLPDRVINLILQYLSNSISKSSMYNLLQPHLNT 345

Query: 121 LLFEIVFPLMCFNDNDQKLWEEDPHEYVRKGYDIIEDLYSPRTASMDFVSELVRKRGKEN 180
           LLFEIVFPLMCFNDNDQ LW+EDPHEYVRKGYDIIEDLYSPRTASMDFV+ELVRKRGKEN
Sbjct: 346 LLFEIVFPLMCFNDNDQMLWDEDPHEYVRKGYDIIEDLYSPRTASMDFVTELVRKRGKEN 405

Query: 181 LHKFIQFIVEIFRRYDEASIEYKPYRQKDGALLAIGALCDKLKQSEPYKSELERMLVQHV 240
             KFIQF+V+IF+RY+EAS+E KPYR KDGALLA+G LCDKL+Q+EPYKSELE MLVQHV
Sbjct: 406 FPKFIQFVVDIFKRYNEASLENKPYRLKDGALLAVGTLCDKLRQTEPYKSELENMLVQHV 465

Query: 241 FPEFNSPVGHLRAKVC 256
           FPEF+SP GHLRAK  
Sbjct: 466 FPEFSSPAGHLRAKAA 481


>AT2G31660.1 | Symbols: SAD2, URM9 | ARM repeat superfamily protein
           | chr2:13464519-13471353 FORWARD LENGTH=1040
          Length = 1040

 Score =  449 bits (1155), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 216/256 (84%), Positives = 241/256 (94%)

Query: 1   MILFLNVLERPVPLEGQPMDPELRKSWGWWKVKKWTVHILNRLYTRFGDLKLQNPENKAF 60
           M+LFL+V ERPVP+EGQPMDPELRKSWGWWKVKKWTVHILNRLY+RFGD KLQ+PENK F
Sbjct: 230 MVLFLSVSERPVPVEGQPMDPELRKSWGWWKVKKWTVHILNRLYSRFGDPKLQSPENKPF 289

Query: 61  AQMFQKHYAGKILECHLNLLNVIRVGGYLPDRVINLILQYLSNSISRNSMYTLLQPRLDV 120
           AQMFQK+YAG+ILE HLN LN IRVGGYLPDRVINL+LQYLSNSIS+NSMY LL PRLDV
Sbjct: 290 AQMFQKNYAGRILEGHLNFLNTIRVGGYLPDRVINLLLQYLSNSISKNSMYKLLLPRLDV 349

Query: 121 LLFEIVFPLMCFNDNDQKLWEEDPHEYVRKGYDIIEDLYSPRTASMDFVSELVRKRGKEN 180
           LLFEIVFPLMCFNDNDQKLWEEDPHEYVRKGY+IIEDLYSPRTASMDFV+ELVRKRGKEN
Sbjct: 350 LLFEIVFPLMCFNDNDQKLWEEDPHEYVRKGYNIIEDLYSPRTASMDFVNELVRKRGKEN 409

Query: 181 LHKFIQFIVEIFRRYDEASIEYKPYRQKDGALLAIGALCDKLKQSEPYKSELERMLVQHV 240
           L KF++F+VEIF  Y++A++E KPYRQKDGA+LA+GALCDKLKQ++PYKS+LE MLVQH+
Sbjct: 410 LPKFVKFVVEIFLSYEKATVEEKPYRQKDGAMLAVGALCDKLKQTDPYKSQLELMLVQHI 469

Query: 241 FPEFNSPVGHLRAKVC 256
           FP+FNSPVGHLRAK  
Sbjct: 470 FPDFNSPVGHLRAKAA 485


>AT3G17340.1 | Symbols:  | ARM repeat superfamily protein |
           chr3:5920613-5926846 REVERSE LENGTH=1090
          Length = 1090

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 66/138 (47%), Gaps = 23/138 (16%)

Query: 60  FAQMFQKH--YAGK----ILECHLNLL----NVIRVGGYLPDRVINLILQYLSNSISRNS 109
           F  +  +H  Y+ K    I+ C + ++    N+ ++G  L +R+I+L    +S  +    
Sbjct: 283 FCTLVSRHRKYSDKLVPEIINCSMKIVKHSSNIGKLG-CLTERIISLAFDVISRVMEIGP 341

Query: 110 MYTLLQPRLDVLLFEIVFPLMCFNDNDQKLWEEDPHEYVRK----------GYDIIEDLY 159
            + LL P    LL   +FP +  N+ D   WEED  E++RK          G+   +DL+
Sbjct: 342 GWRLLSPHFSFLLDSAIFPALVLNERDISEWEEDADEFIRKNLPSELEEISGWR--DDLF 399

Query: 160 SPRTASMDFVSELVRKRG 177
           + R ++M+ +  L   +G
Sbjct: 400 TARKSAMNLLCVLAMSKG 417


>AT3G17340.2 | Symbols:  | ARM repeat superfamily protein |
           chr3:5920613-5926846 REVERSE LENGTH=1093
          Length = 1093

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 66/138 (47%), Gaps = 23/138 (16%)

Query: 60  FAQMFQKH--YAGK----ILECHLNLL----NVIRVGGYLPDRVINLILQYLSNSISRNS 109
           F  +  +H  Y+ K    I+ C + ++    N+ ++G  L +R+I+L    +S  +    
Sbjct: 283 FCTLVSRHRKYSDKLVPEIINCSMKIVKHSSNIGKLG-CLTERIISLAFDVISRVMEIGP 341

Query: 110 MYTLLQPRLDVLLFEIVFPLMCFNDNDQKLWEEDPHEYVRK----------GYDIIEDLY 159
            + LL P    LL   +FP +  N+ D   WEED  E++RK          G+   +DL+
Sbjct: 342 GWRLLSPHFSFLLDSAIFPALVLNERDISEWEEDADEFIRKNLPSELEEISGWR--DDLF 399

Query: 160 SPRTASMDFVSELVRKRG 177
           + R ++M+ +  L   +G
Sbjct: 400 TARKSAMNLLCVLAMSKG 417