Miyakogusa Predicted Gene

Lj0g3v0303019.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0303019.1 Non Chatacterized Hit- tr|H2T5U0|H2T5U0_TAKRU
Uncharacterized protein (Fragment) OS=Takifugu
rubripe,28.09,1e-17,SUBFAMILY NOT NAMED,NULL; ZINC FINGER, CCHC DOMAIN
CONTAINING 8,NULL; proline-rich domain in spliceo,CUFF.20371.1
         (501 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G38600.1 | Symbols:  | Proline-rich spliceosome-associated (P...   356   3e-98
AT1G67210.2 | Symbols:  | Proline-rich spliceosome-associated (P...   336   3e-92
AT1G67210.1 | Symbols:  | Proline-rich spliceosome-associated (P...   335   4e-92

>AT5G38600.1 | Symbols:  | Proline-rich spliceosome-associated (PSP)
           family protein / zinc knuckle (CCHC-type) family protein
           | chr5:15457386-15460466 FORWARD LENGTH=532
          Length = 532

 Score =  356 bits (913), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 193/330 (58%), Positives = 234/330 (70%), Gaps = 18/330 (5%)

Query: 67  GAKRARITVEEHQPSVHFIYNSLTRASRQKLEELLQQWSEWQAKHVPKSDDLSEVLESGE 126
           G KR R + +E QP+VH  Y  LTRAS+QKLE LLQ+WSEW+A++   + D  ++ ESGE
Sbjct: 109 GVKRPRTSYDEQQPTVHVTYKHLTRASKQKLESLLQKWSEWEAENTSLAQDQEQLFESGE 168

Query: 127 KTFFPALCVGLEKTSSVSFWMENQTSIDKNKDFIL-DGDSVPLYDRGYALGLTSADGSSN 185
           +T FPA+ VGL+KTSSVSFW++NQT     +DF+L +  + PLYDR +A+GL SADGS N
Sbjct: 169 ETCFPAIRVGLQKTSSVSFWIDNQTGHKPLEDFVLVESSTTPLYDRKFAIGLNSADGSRN 228

Query: 186 LDGGLEII-EDASRCFNCGSYNHSLRECSRPRDNVAVNSARKQRKSRRNQNVSS-RNPTR 243
           ++GGLEII +D  RCFNCG Y+HSLREC RP D  AVNSARK +KS+RNQN S  R P+R
Sbjct: 229 VEGGLEIIDDDPPRCFNCGGYSHSLRECPRPFDRSAVNSARKLQKSKRNQNSSGPRLPSR 288

Query: 244 YYQNSPAGKYDGLRPGALDNVTRRLLGLGELDPPPWLNRMREIGYPPGYLDVDAEDQPSG 303
           YYQ +  GKYDGL+PG LD  TR+LL LGELDPPPWLNRMREIGYPPGYL    +D  SG
Sbjct: 289 YYQKTQTGKYDGLKPGTLDAETRQLLNLGELDPPPWLNRMREIGYPPGYL-APEDDHLSG 347

Query: 304 ITIY----TDAEIAEQEDGEIME-ANH-SKPKRKMTVGFPGINAPIPENADERLWAAGAG 357
           ITI+       E  E EDGEI+E ANH  +P+ K TV FPGINAP PENADE LW A   
Sbjct: 348 ITIFGEEVETREEIESEDGEILEKANHPPEPQMKKTVEFPGINAPFPENADEWLWEAAPS 407

Query: 358 PSSSDVSRNLPQHRSNHNTDHGSRGH-YRE 386
             +S  S    Q ++       SRGH YR+
Sbjct: 408 HRNSSRSGRWQQQKT-------SRGHDYRD 430


>AT1G67210.2 | Symbols:  | Proline-rich spliceosome-associated (PSP)
           family protein / zinc knuckle (CCHC-type) family protein
           | chr1:25141339-25143774 FORWARD LENGTH=403
          Length = 403

 Score =  336 bits (861), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 184/333 (55%), Positives = 235/333 (70%), Gaps = 12/333 (3%)

Query: 29  TEKEEYANSSQEKGLHVGSELSDTV-VVSEEVRPDIDGR-GAKRARITVEEHQPSVHFIY 86
           TE +    S Q  G     E+ D V V  E V+ D+  + G KRAR    E QPSVH  Y
Sbjct: 27  TEDDFRNVSGQFSGQASIVEVGDAVDVRVETVKVDVSSKSGVKRARTISLEQQPSVHVTY 86

Query: 87  NSLTRASRQKLEELLQQWSEWQAKHVPKSDDLSEVLESGEKTFFPALCVGLEKTSSVSFW 146
             LTR S+QKLE LLQQWSEW+A+    S+D  +VLE+G++T+FPAL VGL+KTSSVSFW
Sbjct: 87  KHLTRDSKQKLESLLQQWSEWEAEQNSLSEDQEQVLEAGDETYFPALRVGLQKTSSVSFW 146

Query: 147 MENQTSIDKNKDFI-LDGDSVPLYDRGYALGLTSADGSSNLDGGLEIIEDASRCFNCGSY 205
            + QT    +K  + ++  + PLY+RG+ +GL S  GS+N++GGLEII+D  RCFNCG+Y
Sbjct: 147 FDYQTGHSSSKKSVPVESSTTPLYNRGFTIGLDS--GSNNVEGGLEIIDDPPRCFNCGAY 204

Query: 206 NHSLRECSRPRDNVAVNSARKQRKSRRNQNVSSRNPTRYYQNSPAGKYDGLRPGALDNVT 265
           +HS+REC RP D  AV++AR+Q K +RNQ   SR P+RYYQ+   GKYDGL+PG+LD  T
Sbjct: 205 SHSIRECPRPFDRSAVSNARRQHKRKRNQTPGSRLPSRYYQSLQRGKYDGLKPGSLDAET 264

Query: 266 RRLLGLGELDPPPWLNRMREIGYPPGYLDVDAEDQPSGITIY-----TDAEIAEQEDGEI 320
           R+LLGL ELDPPPWLNRMREIGYPPGY + D +D  S ITI+      + E  + E+GEI
Sbjct: 265 RKLLGLKELDPPPWLNRMREIGYPPGYFEEDDDDH-SRITIFGEEETKEEEEVKTEEGEI 323

Query: 321 ME-ANHSKPKRKMTVGFPGINAPIPENADERLW 352
           +E A+  +P++ MTVGFPGINAPIPENAD  LW
Sbjct: 324 LEKASPQEPRKIMTVGFPGINAPIPENADSWLW 356


>AT1G67210.1 | Symbols:  | Proline-rich spliceosome-associated (PSP)
           family protein / zinc knuckle (CCHC-type) family protein
           | chr1:25141339-25143774 FORWARD LENGTH=405
          Length = 405

 Score =  335 bits (859), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 184/334 (55%), Positives = 235/334 (70%), Gaps = 12/334 (3%)

Query: 29  TEKEEYANSSQEKGLHVGSELSDTV-VVSEEVRPDIDGR-GAKRARITVEEHQPSVHFIY 86
           TE +    S Q  G     E+ D V V  E V+ D+  + G KRAR    E QPSVH  Y
Sbjct: 27  TEDDFRNVSGQFSGQASIVEVGDAVDVRVETVKVDVSSKSGVKRARTISLEQQPSVHVTY 86

Query: 87  NSLTRASRQKLEELLQQWSEWQAKHVPKSDDLSEVLESGEKTFFPALCVGLEKTSSVSFW 146
             LTR S+QKLE LLQQWSEW+A+    S+D  +VLE+G++T+FPAL VGL+KTSSVSFW
Sbjct: 87  KHLTRDSKQKLESLLQQWSEWEAEQNSLSEDQEQVLEAGDETYFPALRVGLQKTSSVSFW 146

Query: 147 MENQTSIDKNKDFI-LDGDSVPLYDRGYALGLTSADGSSNLDGGLEIIEDASRCFNCGSY 205
            + QT    +K  + ++  + PLY+RG+ +GL S  GS+N++GGLEII+D  RCFNCG+Y
Sbjct: 147 FDYQTGHSSSKKSVPVESSTTPLYNRGFTIGLDS--GSNNVEGGLEIIDDPPRCFNCGAY 204

Query: 206 NHSLRECSRPRDNVAVNSARKQRKSRRNQNVSSRNPTRYYQNSPAGKYDGLRPGALDNVT 265
           +HS+REC RP D  AV++AR+Q K +RNQ   SR P+RYYQ+   GKYDGL+PG+LD  T
Sbjct: 205 SHSIRECPRPFDRSAVSNARRQHKRKRNQTPGSRLPSRYYQSLQRGKYDGLKPGSLDAET 264

Query: 266 RRLLGLGELDPPPWLNRMREIGYPPGYLDVDAEDQP-SGITIY-----TDAEIAEQEDGE 319
           R+LLGL ELDPPPWLNRMREIGYPPGY  V+ +D   S ITI+      + E  + E+GE
Sbjct: 265 RKLLGLKELDPPPWLNRMREIGYPPGYFAVEEDDDDHSRITIFGEEETKEEEEVKTEEGE 324

Query: 320 IME-ANHSKPKRKMTVGFPGINAPIPENADERLW 352
           I+E A+  +P++ MTVGFPGINAPIPENAD  LW
Sbjct: 325 ILEKASPQEPRKIMTVGFPGINAPIPENADSWLW 358