Miyakogusa Predicted Gene

Lj0g3v0302449.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0302449.1 Non Chatacterized Hit- tr|J3N3W3|J3N3W3_ORYBR
Uncharacterized protein OS=Oryza brachyantha GN=OB10G2,50,2e-19,no
description,Chloramphenicol acetyltransferase-like domain; SUBFAMILY
NOT NAMED,NULL; FAMILY NOT N,CUFF.20329.1
         (94 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G17540.1 | Symbols:  | HXXXD-type acyl-transferase family pro...    82   6e-17
AT3G03480.1 | Symbols: CHAT | acetyl CoA:(Z)-3-hexen-1-ol acetyl...    56   5e-09

>AT5G17540.1 | Symbols:  | HXXXD-type acyl-transferase family
           protein | chr5:5782061-5783682 REVERSE LENGTH=461
          Length = 461

 Score = 82.4 bits (202), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 52/116 (44%), Positives = 67/116 (57%), Gaps = 23/116 (19%)

Query: 1   MHSLADLMVIKGRPHFTVVRSYLVSDV--------------TRAGVGGAV------ASFY 40
           M SLADLMVIKGRP F+   +YLVSDV                 G+G A       ASFY
Sbjct: 347 MRSLADLMVIKGRPSFSSDGAYLVSDVRIFADIDFGIWGKPVYGGIGTAGVEDLPGASFY 406

Query: 41  IAFKNAKGEEGLVIPVCLPSEAMERFTKELDNVLKNHIEPTTRGFKSS--FIVSSI 94
           ++F+   GE G+V+PVCLP +AM+RF +EL+ V    +    RG KSS   I+SS+
Sbjct: 407 VSFEKRNGEIGIVVPVCLPEKAMQRFVEELEGVFNGQVV-FNRGSKSSNKLIMSSL 461


>AT3G03480.1 | Symbols: CHAT | acetyl CoA:(Z)-3-hexen-1-ol
           acetyltransferase | chr3:828400-829863 REVERSE
           LENGTH=454
          Length = 454

 Score = 55.8 bits (133), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 46/97 (47%), Gaps = 22/97 (22%)

Query: 1   MHSLADLMVIKGRPHFTVVRSYLVSDVTRAGVG------------GAVA----------S 38
           + S+  LM  +GRP F    +Y++SD+    +G            G  A          S
Sbjct: 354 VRSVTALMATRGRPMFVASGNYIISDLRHFDLGKIDFGPWGKPVYGGTAKAGIALFPGVS 413

Query: 39  FYIAFKNAKGEEGLVIPVCLPSEAMERFTKELDNVLK 75
           FY+ FKN KGE G V+ + LP  AME F  EL+ VL 
Sbjct: 414 FYVPFKNKKGETGTVVAISLPVRAMETFVAELNGVLN 450