Miyakogusa Predicted Gene
- Lj0g3v0302229.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0302229.1 Non Chatacterized Hit- tr|I1J411|I1J411_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,77.29,0,PPR_2,Pentatricopeptide repeat; PPR,Pentatricopeptide
repeat; DYW_deaminase,NULL; SUBFAMILY NOT NAME,gene.g23513.t1.1
(722 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 874 0.0
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 551 e-157
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 525 e-149
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 524 e-148
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 515 e-146
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 512 e-145
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 510 e-144
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 509 e-144
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 509 e-144
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 499 e-141
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 499 e-141
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 494 e-139
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 493 e-139
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 491 e-139
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 486 e-137
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 480 e-135
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 479 e-135
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 478 e-135
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 478 e-135
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 477 e-134
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 476 e-134
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 475 e-134
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 473 e-133
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 471 e-133
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 471 e-132
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 466 e-131
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 466 e-131
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 466 e-131
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 466 e-131
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 466 e-131
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 462 e-130
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 459 e-129
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 459 e-129
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 459 e-129
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 457 e-129
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 457 e-129
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 457 e-128
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 452 e-127
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 448 e-126
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 445 e-125
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 444 e-124
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 441 e-124
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 440 e-123
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 434 e-122
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 434 e-121
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 434 e-121
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 434 e-121
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 428 e-120
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 427 e-119
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 424 e-118
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 419 e-117
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 419 e-117
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 418 e-117
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 417 e-116
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 417 e-116
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 417 e-116
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 415 e-116
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 414 e-116
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 413 e-115
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 411 e-114
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 408 e-114
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 408 e-114
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 407 e-113
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 406 e-113
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 405 e-113
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 404 e-112
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 403 e-112
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 401 e-112
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 398 e-111
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 397 e-110
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 397 e-110
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 395 e-110
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 395 e-110
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 395 e-110
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 394 e-109
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 393 e-109
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 392 e-109
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 392 e-109
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 386 e-107
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 386 e-107
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 385 e-107
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 384 e-106
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 381 e-105
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 378 e-105
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 377 e-104
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 377 e-104
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 375 e-104
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 375 e-104
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 375 e-104
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 374 e-103
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 373 e-103
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 373 e-103
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 371 e-103
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 369 e-102
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 365 e-101
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 362 e-100
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 362 e-100
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 357 2e-98
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 354 1e-97
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 352 6e-97
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 351 1e-96
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 348 6e-96
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 347 2e-95
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 342 4e-94
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 342 6e-94
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 342 7e-94
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 341 1e-93
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 332 8e-91
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 328 7e-90
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 327 2e-89
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 324 1e-88
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 322 5e-88
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 321 1e-87
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 320 2e-87
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 320 2e-87
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 319 4e-87
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 6e-86
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 313 3e-85
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 312 6e-85
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 311 1e-84
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 310 3e-84
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 307 2e-83
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 306 3e-83
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 8e-82
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 301 9e-82
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 300 2e-81
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 2e-81
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 299 4e-81
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 297 2e-80
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 296 3e-80
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 296 3e-80
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 295 8e-80
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 294 1e-79
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 286 3e-77
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 4e-77
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 4e-77
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 285 7e-77
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 1e-76
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 284 1e-76
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 2e-76
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 281 9e-76
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 2e-75
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 2e-75
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 3e-75
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 1e-74
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 276 3e-74
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 4e-74
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 273 2e-73
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 272 8e-73
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 1e-72
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 2e-72
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 270 2e-72
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 270 3e-72
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 9e-72
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 1e-71
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 267 2e-71
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 266 3e-71
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 7e-71
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 7e-71
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 1e-70
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 1e-70
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 1e-70
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 1e-69
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 1e-68
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 255 6e-68
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 9e-68
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 2e-67
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 252 7e-67
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 1e-66
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 1e-66
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 4e-66
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 1e-65
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 3e-65
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 1e-63
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 2e-63
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 2e-63
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 240 3e-63
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 240 3e-63
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 1e-62
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 236 6e-62
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 1e-61
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 9e-61
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 9e-61
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 3e-60
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 4e-60
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 1e-59
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 2e-59
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 227 2e-59
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 224 2e-58
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 218 8e-57
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 217 2e-56
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 2e-55
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 2e-55
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 7e-52
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 3e-50
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 1e-48
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 3e-47
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 2e-46
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 3e-40
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 155 8e-38
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 9e-38
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 5e-32
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 132 7e-31
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 5e-28
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 4e-24
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 109 6e-24
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 109 9e-24
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 2e-23
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 107 2e-23
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 3e-23
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 4e-23
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 6e-22
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 9e-22
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-21
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 1e-21
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 100 3e-21
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 3e-21
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 5e-21
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 7e-21
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 1e-20
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 1e-20
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 2e-20
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 2e-20
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 2e-20
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 3e-20
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 97 3e-20
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 4e-20
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 5e-20
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 6e-20
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 8e-20
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 9e-20
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 1e-19
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 1e-19
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 1e-19
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 1e-19
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 7e-19
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 8e-19
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 8e-19
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 1e-18
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 1e-18
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 2e-18
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 2e-18
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 2e-18
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 3e-18
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 6e-18
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 6e-18
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 7e-18
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 89 1e-17
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 89 1e-17
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 5e-17
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 6e-17
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 1e-16
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 85 2e-16
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 3e-16
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 84 5e-16
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 6e-16
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 7e-16
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 9e-16
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 3e-15
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 6e-15
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 6e-15
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 79 1e-14
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 78 2e-14
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 6e-14
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 8e-14
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 8e-14
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 9e-14
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 2e-13
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 7e-13
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 8e-13
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 72 2e-12
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 71 2e-12
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 71 3e-12
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 7e-12
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 69 1e-11
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 69 1e-11
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 67 4e-11
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 67 5e-11
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 6e-11
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 6e-11
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 6e-11
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 9e-11
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 1e-10
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 1e-10
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 64 5e-10
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 61 3e-09
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 60 5e-09
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 60 5e-09
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 6e-09
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 1e-08
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 58 2e-08
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-08
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 57 6e-08
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 9e-08
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 9e-08
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 1e-07
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 55 2e-07
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 55 2e-07
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 5e-07
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 7e-07
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 8e-07
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 52 1e-06
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 52 2e-06
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 9e-06
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/725 (57%), Positives = 548/725 (75%), Gaps = 8/725 (1%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
KRD+VSW +MM+C+ NN E +A+ F++ LE G PN+YC+TA +RACSNS + VGRV
Sbjct: 128 KRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRV 187
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
G ++KTG+F+S V VGC LIDMFVKG E+A++VF+KM E NVVTW LM+TR QM
Sbjct: 188 TLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQM 247
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVG 183
G+P ++I F M+LSG+ D+FTL+S +ACAELE LS+GKQLHSW IRSGL D V
Sbjct: 248 GFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VE 305
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDML- 242
CSLVDMYAKC+ DGS+ D R+VF+ M +H+V+SWTALI GY++ EA+ LF +M+
Sbjct: 306 CSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMIT 365
Query: 243 QGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLE 302
QG+V PN FTFSS KAC NL D G+Q+ Q K GL++ + VANS+I+M+ +S R+E
Sbjct: 366 QGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRME 425
Query: 303 CARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTG-IGACSFTYACLLSGAA 361
A++ F+ L EK+LVS T +D R+LN ++ +E T +G +FT+A LLSG A
Sbjct: 426 DAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVA 485
Query: 362 CIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTS 421
+G+I KGEQIH+ VVK G N + NALISMYSKCG+ + A +VFN M +RNVI+WTS
Sbjct: 486 NVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTS 545
Query: 422 IISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCH 481
+I+GFAKHG+A + LE F +M+E GVKPN+VTY+A+LSACSHVGL+ EGW+HFNSM H
Sbjct: 546 MITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDH 605
Query: 482 GVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHA 541
+ P++EHYACMVD+L R+GLL++A EFIN+MP AD +VWR+ LG+CRVH NTELG+ A
Sbjct: 606 KIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLA 665
Query: 542 AKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHK 601
A+ ILE +P++PA YI LSN+YA +W + +R+ MK++ ++KE G SWIEV +++HK
Sbjct: 666 ARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHK 725
Query: 602 FHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTDFVLHDV----EDEQKEQYLFQHSEK 657
F+VGDT+HP A +IYDELD L ++IK+ GYVP+TD VLH + ++ +KE+ L+QHSEK
Sbjct: 726 FYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEK 785
Query: 658 IAVAFALISIPNPKPIRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGTCS 717
IAVAF LIS +P+R+FKNLRVCGDCH A+KYIS V+GR IV+RD NRFHH KDG CS
Sbjct: 786 IAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCS 845
Query: 718 CNDYW 722
CNDYW
Sbjct: 846 CNDYW 850
Score = 201 bits (511), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 151/553 (27%), Positives = 280/553 (50%), Gaps = 22/553 (3%)
Query: 20 NSMEHEALVTFLDMLEH-GFYP-NEYCFTAALRACSNSLYFSVGRVVFGSVLKTGYFDSH 77
N+ + V+ LD++ G P + F++ L++C + F +G++V +++
Sbjct: 38 NAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDS 97
Query: 78 VSVGCELIDMFVKGCGDIESAHRVFEKMQ---ERNVVTWNLMMTRFAQMGYPEDSIDLFF 134
V LI ++ K GD A VFE M+ +R+VV+W+ MM + G D+I +F
Sbjct: 98 VLYN-SLISLYSKS-GDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFV 155
Query: 135 RMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSG-LALDLCVGCSLVDMYAKC 193
L G P+ + T+ + AC+ + + VG+ +++++G D+CVGCSL+DM+ K
Sbjct: 156 EFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKG 215
Query: 194 AVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTF 253
+ S ++ +VF+ M E NVV+WT +I ++ G +EA+R F DM+ + FT
Sbjct: 216 --ENSFENAYKVFDKMSELNVVTWTLMITRCMQ-MGFPREAIRFFLDMVLSGFESDKFTL 272
Query: 254 SSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYAR---SGRLECARKCFDL 310
SSV ACA L + G+QLHS I+ GL V+ V SL++MYA+ G ++ RK FD
Sbjct: 273 SSVFSACAELENLSLGKQLHSWAIRSGL--VDDVECSLVDMYAKCSADGSVDDCRKVFDR 330
Query: 311 LFEKSLVSCETIVDVIVRDLN-SDETLNHETEHTTG--IGACSFTYACLLSGAACIGTIG 367
+ + S++S ++ +++ N + E +N +E T + FT++ +
Sbjct: 331 MEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPR 390
Query: 368 KGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFA 427
G+Q+ K G +N S+ N++ISM+ K E A + F + ++N++++ + + G
Sbjct: 391 VGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTC 450
Query: 428 KHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRV 487
++ +A +L E+ E + + T+ ++LS ++VG I +G + +S G+
Sbjct: 451 RNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKG-EQIHSQVVKLGLSCNQ 509
Query: 488 EHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHG-NTELGEHAAKMIL 546
++ + + G + A N M + + + W S++ HG + E +MI
Sbjct: 510 PVCNALISMYSKCGSIDTASRVFNFME-NRNVISWTSMITGFAKHGFAIRVLETFNQMIE 568
Query: 547 EREPHDPATYILL 559
E + TY+ +
Sbjct: 569 EGVKPNEVTYVAI 581
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/452 (26%), Positives = 225/452 (49%), Gaps = 25/452 (5%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR 62
S+ ++V+W M++ EA+ FLDM+ GF +++ ++ AC+ S+G+
Sbjct: 230 SELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGK 289
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVK--GCGDIESAHRVFEKMQERNVVTWNLMMTRF 120
+ +++G D V C L+DM+ K G ++ +VF++M++ +V++W ++T +
Sbjct: 290 QLHSWAIRSGLVD---DVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGY 346
Query: 121 AQ-MGYPEDSIDLFFRMLLSGYT-PDRFTLTSALTACAELELLSVGKQLHSWVIRSGLAL 178
+ ++I+LF M+ G+ P+ FT +SA AC L VGKQ+ + GLA
Sbjct: 347 MKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLAS 406
Query: 179 DLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLF 238
+ V S++ M+ K + D++R F S+ E N+VS+ + G R EQ A +L
Sbjct: 407 NSSVANSVISMFVK---SDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQ-AFKLL 462
Query: 239 CDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARS 298
++ + + + FTF+S+L AN+ GEQ+HSQ +KLGLS V N+LI+MY++
Sbjct: 463 SEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKC 522
Query: 299 GRLECARKCFDLLFEKSLVSCETIVDVIVRD---LNSDETLNHETEHTTGIGACSFTYAC 355
G ++ A + F+ + ++++S +++ + + ET N E G+ TY
Sbjct: 523 GSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEE--GVKPNEVTYVA 580
Query: 356 LLSGAACIGTIGKG-EQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMG-D 413
+LS + +G + +G +++ + + ++ + + G A + N M
Sbjct: 581 ILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQ 640
Query: 414 RNVITWTSIISGFAKHG-------YATKALEL 438
+V+ W + + H A K LEL
Sbjct: 641 ADVLVWRTFLGACRVHSNTELGKLAARKILEL 672
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 551 bits (1421), Expect = e-157, Method: Compositional matrix adjust.
Identities = 285/724 (39%), Positives = 452/724 (62%), Gaps = 16/724 (2%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
+R++V+W +++S +A NSM E L F+ M G PN + F AAL + G
Sbjct: 156 ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ 215
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
V V+K G D + V LI++++K CG++ A +F+K + ++VVTWN M++ +A
Sbjct: 216 VHTVVVKNG-LDKTIPVSNSLINLYLK-CGNVRKARILFDKTEVKSVVTWNSMISGYAAN 273
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVG 183
G +++ +F+ M L+ + S + CA L+ L +QLH V++ G D +
Sbjct: 274 GLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIR 333
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSMP-EHNVVSWTALIAGYVRGSGQEQEAMRLFCDML 242
+L+ Y+KC +++D+ R+F + NVVSWTA+I+G+++ G+E EA+ LF +M
Sbjct: 334 TALMVAYSKCT---AMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKE-EAVDLFSEMK 389
Query: 243 QGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLE 302
+ V PN FT+S +L A LP E +H+Q +K + V +L++ Y + G++E
Sbjct: 390 RKGVRPNEFTYSVILTA---LPVISPSE-VHAQVVKTNYERSSTVGTALLDAYVKLGKVE 445
Query: 303 CARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTG-IGACSFTYACLLSG-A 360
A K F + +K +V+ ++ + ++ + E T G I FT++ +L+ A
Sbjct: 446 EAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCA 505
Query: 361 ACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWT 420
A ++G+G+Q H +KS +++L +++AL++MY+K GN E+A +VF ++++++W
Sbjct: 506 ATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWN 565
Query: 421 SIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSM-RH 479
S+ISG+A+HG A KAL++F EM + VK + VT+I V +AC+H GL++EG K+F+ M R
Sbjct: 566 SMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRD 625
Query: 480 CHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGE 539
C + P EH +CMVD+ R+G L +A++ I +MP A + +WR++L +CRVH TELG
Sbjct: 626 CK-IAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGR 684
Query: 540 HAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQV 599
AA+ I+ +P D A Y+LLSN+YA W + A +RK M ++ + KE GYSWIEV+N+
Sbjct: 685 LAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKT 744
Query: 600 HKFHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTDFVLHDVEDEQKEQYLFQHSEKIA 659
+ F GD SHP +IY +L++L++++K LGY P+T +VL D++DE KE L QHSE++A
Sbjct: 745 YSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLA 804
Query: 660 VAFALISIPNPKPIRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHI-KDGTCSC 718
+AF LI+ P P+ I KNLRVCGDCH IK I+K+ R IVVRD+NRFHH DG CSC
Sbjct: 805 IAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSC 864
Query: 719 NDYW 722
D+W
Sbjct: 865 GDFW 868
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 156/581 (26%), Positives = 300/581 (51%), Gaps = 28/581 (4%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
RD S+ S++ F+ + EA FL++ G + F++ L+ + GR +
Sbjct: 56 RDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQL 115
Query: 65 FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG 124
+K G+ D VSVG L+D ++KG + + +VF++M+ERNVVTW +++ +A+
Sbjct: 116 HCQCIKFGFLDD-VSVGTSLVDTYMKG-SNFKDGRKVFDEMKERNVVTWTTLISGYARNS 173
Query: 125 YPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGC 184
++ + LF RM G P+ FT +AL AE + G Q+H+ V+++GL + V
Sbjct: 174 MNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSN 233
Query: 185 SLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQG 244
SL+++Y KC G++ +R +F+ +VV+W ++I+GY +G + EA+ +F M
Sbjct: 234 SLINLYLKC---GNVRKARILFDKTEVKSVVTWNSMISGYA-ANGLDLEALGMFYSMRLN 289
Query: 245 NVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYAR-SGRLEC 303
V + +F+SV+K CANL + F EQLH +K G + +L+ Y++ + L+
Sbjct: 290 YVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDA 349
Query: 304 ARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETE-HTTGIGACSFTYACLLSGAAC 362
R ++ ++VS ++ +++ +E ++ +E G+ FTY+ +L+
Sbjct: 350 LRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPV 409
Query: 363 IGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSI 422
I ++HA VVK+ +E + ++ AL+ Y K G E A +VF+ + D++++ W+++
Sbjct: 410 ISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAM 465
Query: 423 ISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHG 482
++G+A+ G A+++F E+ + G+KPN+ T+ ++L+ C+ K F H
Sbjct: 466 LAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQF----HGFA 521
Query: 483 VVPRVEHYACMVDVL----GRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELG 538
+ R++ C+ L + G + E+ E + + D + W S++ HG
Sbjct: 522 IKSRLDSSLCVSSALLTMYAKKGNI-ESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKA 580
Query: 539 EHAAKMILERE-PHDPATYILL------SNLYATEERWYDV 572
K + +R+ D T+I + + L E+++D+
Sbjct: 581 LDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDI 621
Score = 189 bits (480), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 139/446 (31%), Positives = 220/446 (49%), Gaps = 20/446 (4%)
Query: 97 SAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACA 156
+AH +F+K R+ ++ ++ F++ G +++ LF + G D +S L A
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSA 104
Query: 157 ELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVS 216
L G+QLH I+ G D+ VG SLVD Y K + + D R+VF+ M E NVV+
Sbjct: 105 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGS---NFKDGRKVFDEMKERNVVT 161
Query: 217 WTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQT 276
WT LI+GY R S E + LF M PN FTF++ L A G G Q+H+
Sbjct: 162 WTTLISGYARNS-MNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVV 220
Query: 277 IKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETL 336
+K GL V+NSLIN+Y + G + AR FD KS+V+ +++ + E L
Sbjct: 221 VKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEAL 280
Query: 337 N-HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMY 395
+ + ++A ++ A + + EQ+H VVK GF + +I AL+ Y
Sbjct: 281 GMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAY 340
Query: 396 SKCGNKEAALQVFNDMG-DRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTY 454
SKC AL++F ++G NV++WT++ISGF ++ +A++LF EM GV+PN+ TY
Sbjct: 341 SKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTY 400
Query: 455 IAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYA----CMVDVLGRSGLLSEAIEFI 510
+L+A + S H V E + ++D + G + EA +
Sbjct: 401 SVILTALPVIS---------PSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVF 451
Query: 511 NSMPLDADAMVWRSLLGSCRVHGNTE 536
+ + D D + W ++L G TE
Sbjct: 452 SGID-DKDIVAWSAMLAGYAQTGETE 476
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 525 bits (1352), Expect = e-149, Method: Compositional matrix adjust.
Identities = 268/721 (37%), Positives = 432/721 (59%), Gaps = 7/721 (0%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR 62
S+RD V++ ++++ + +A+ F M G P+ + + ACS G+
Sbjct: 350 SQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQ 409
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
+ K G F S+ + L++++ K C DIE+A F + + NVV WN+M+ +
Sbjct: 410 QLHAYTTKLG-FASNNKIEGALLNLYAK-CADIETALDYFLETEVENVVLWNVMLVAYGL 467
Query: 123 MGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCV 182
+ +S +F +M + P+++T S L C L L +G+Q+HS +I++ L+ V
Sbjct: 468 LDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV 527
Query: 183 GCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDML 242
L+DMYAK G L + + +VVSWT +IAGY + + ++ A+ F ML
Sbjct: 528 CSVLIDMYAKL---GKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDK-ALTTFRQML 583
Query: 243 QGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLE 302
+ + ++ + ACA L G+Q+H+Q G S+ N+L+ +Y+R G++E
Sbjct: 584 DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIE 643
Query: 303 CARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETE-HTTGIGACSFTYACLLSGAA 361
+ F+ ++ +V + N++E L + GI +FT+ + A+
Sbjct: 644 ESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAAS 703
Query: 362 CIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTS 421
+ +G+Q+HA++ K+G+++ + NALISMY+KCG+ A + F ++ +N ++W +
Sbjct: 704 ETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNA 763
Query: 422 IISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCH 481
II+ ++KHG+ ++AL+ F +M+ + V+PN VT + VLSACSH+GL+D+G +F SM +
Sbjct: 764 IINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEY 823
Query: 482 GVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHA 541
G+ P+ EHY C+VD+L R+GLLS A EFI MP+ DA+VWR+LL +C VH N E+GE A
Sbjct: 824 GLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFA 883
Query: 542 AKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHK 601
A +LE EP D ATY+LLSNLYA ++W R+ MK+K + KE G SWIEV+N +H
Sbjct: 884 AHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHS 943
Query: 602 FHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTDFVLHDVEDEQKEQYLFQHSEKIAVA 661
F+VGD +HP A +I++ +L + ++GYV + +L++++ EQK+ +F HSEK+A++
Sbjct: 944 FYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAIS 1003
Query: 662 FALISIPNPKPIRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGTCSCNDY 721
F L+S+P PI + KNLRVC DCH IK++SKV+ R I+VRDA RFHH + G CSC DY
Sbjct: 1004 FGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDY 1063
Query: 722 W 722
W
Sbjct: 1064 W 1064
Score = 238 bits (608), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 159/532 (29%), Positives = 263/532 (49%), Gaps = 13/532 (2%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
+D SW +M+S + N E EA+ F DM G P Y F++ L AC +G +
Sbjct: 251 KDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQL 310
Query: 65 FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG 124
G VLK G F S V L+ ++ G++ SA +F M +R+ VT+N ++ +Q G
Sbjct: 311 HGLVLKLG-FSSDTYVCNALVSLYFH-LGNLISAEHIFSNMSQRDAVTYNTLINGLSQCG 368
Query: 125 YPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGC 184
Y E +++LF RM L G PD TL S + AC+ L G+QLH++ + G A + +
Sbjct: 369 YGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEG 428
Query: 185 SLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQE-QEAMRLFCDMLQ 243
+L+++YAKCA + +D F NVV W ++ Y G + + + R+F M
Sbjct: 429 ALLNLYAKCADIETALD---YFLETEVENVVLWNVMLVAY--GLLDDLRNSFRIFRQMQI 483
Query: 244 GNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLEC 303
+ PN +T+ S+LK C L D GEQ+HSQ IK V + LI+MYA+ G+L+
Sbjct: 484 EEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDT 543
Query: 304 ARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEH-TTGIGACSFTYACLLSGAAC 362
A K +VS T++ + D+ L + GI + +S A
Sbjct: 544 AWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAG 603
Query: 363 IGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSI 422
+ + +G+QIHA SGF ++L NAL+++YS+CG E + F + I W ++
Sbjct: 604 LQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNAL 663
Query: 423 ISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHG 482
+SGF + G +AL +F M G+ N+ T+ + + A S + +G K +++ G
Sbjct: 664 VSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQG-KQVHAVITKTG 722
Query: 483 VVPRVEHYACMVDVLGRSGLLSEA-IEFINSMPLDADAMVWRSLLGSCRVHG 533
E ++ + + G +S+A +F+ + + W +++ + HG
Sbjct: 723 YDSETEVCNALISMYAKCGSISDAEKQFLEVST--KNEVSWNAIINAYSKHG 772
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 165/632 (26%), Positives = 310/632 (49%), Gaps = 42/632 (6%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRAC-SNSLYFSVGR 62
+R + +W M+ A+ ++ E F+ M+ PNE F+ L AC S+ F V
Sbjct: 148 ERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVE 207
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
+ +L G DS V V LID++ + G ++ A RVF+ ++ ++ +W M++ ++
Sbjct: 208 QIHARILYQGLRDSTV-VCNPLIDLYSRN-GFVDLARRVFDGLRLKDHSSWVAMISGLSK 265
Query: 123 MGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCV 182
++I LF M + G P + +S L+AC ++E L +G+QLH V++ G + D V
Sbjct: 266 NECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYV 325
Query: 183 GCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDML 242
+LV +Y G+L+ + +F++M + + V++ LI G + G ++AM LF M
Sbjct: 326 CNALVSLYFHL---GNLISAEHIFSNMSQRDAVTYNTLING-LSQCGYGEKAMELFKRMH 381
Query: 243 QGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLE 302
+ P+ T +S++ AC+ G+QLH+ T KLG ++ N + +L+N+YA+ +E
Sbjct: 382 LDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIE 441
Query: 303 CARKCF-------DLLFEKSLVSCETIVDV-----IVRDLNSDETLNHETEHTTGIGACS 350
A F +L+ LV+ + D+ I R + +E + ++
Sbjct: 442 TALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQ----------- 490
Query: 351 FTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFND 410
+TY +L +G + GEQIH+ ++K+ F+ N + + LI MY+K G + A +
Sbjct: 491 YTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIR 550
Query: 411 MGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEG 470
++V++WT++I+G+ ++ + KAL F +ML+ G++ ++V +SAC+ + + EG
Sbjct: 551 FAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG 610
Query: 471 WKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCR 530
+ ++ G + +V + R G + E+ D + W +L+ +
Sbjct: 611 -QQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEA-GDNIAWNALVSGFQ 668
Query: 531 VHGNTELGEHAAKMI--LEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEA 588
GN E A ++ + RE D + S + A E A +++ + +I +
Sbjct: 669 QSGNN---EEALRVFVRMNREGIDNNNFTFGSAVKAASE----TANMKQGKQVHAVITKT 721
Query: 589 GY-SWIEVENQVHKFHVGDTSHPQAQKIYDEL 619
GY S EV N + + S A+K + E+
Sbjct: 722 GYDSETEVCNALISMYAKCGSISDAEKQFLEV 753
Score = 206 bits (524), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 141/503 (28%), Positives = 247/503 (49%), Gaps = 16/503 (3%)
Query: 31 LDMLEH-GFYPNEYCFTAALRAC-SNSLYFSVGRVVFGSVLKTGYFDSHVSVGCELIDMF 88
+D +E+ G PN L C + GR + +LK G DS+ + +L D +
Sbjct: 72 IDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLG-LDSNGCLSEKLFDFY 130
Query: 89 VKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTL 148
+ GD+ A +VF++M ER + TWN M+ A + LF RM+ TP+ T
Sbjct: 131 LFK-GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTF 189
Query: 149 TSALTACAELEL-LSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFN 207
+ L AC + V +Q+H+ ++ GL V L+D+Y++ +G + +RRVF+
Sbjct: 190 SGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSR---NGFVDLARRVFD 246
Query: 208 SMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFG 267
+ + SW A+I+G + E EA+RLFCDM + P + FSSVL AC +
Sbjct: 247 GLRLKDHSSWVAMISGLSKNEC-EAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLE 305
Query: 268 FGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIV 327
GEQLH +KLG S+ V N+L+++Y G L A F + ++ V+ T+++ +
Sbjct: 306 IGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLS 365
Query: 328 RDLNSDETLN-HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLS 386
+ ++ + + H G+ S T A L+ + GT+ +G+Q+HA K GF +N
Sbjct: 366 QCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNK 425
Query: 387 INNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETG 446
I AL+++Y+KC + E AL F + NV+ W ++ + + +F +M
Sbjct: 426 IEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEE 485
Query: 447 VKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYAC--MVDVLGRSGLLS 504
+ PN TY ++L C +G ++ G + + + + ++ Y C ++D+ + G L
Sbjct: 486 IVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNF---QLNAYVCSVLIDMYAKLGKLD 542
Query: 505 EAIEFINSMPLDADAMVWRSLLG 527
A + + D + W +++
Sbjct: 543 TAWDILIRFA-GKDVVSWTTMIA 564
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 524 bits (1349), Expect = e-148, Method: Compositional matrix adjust.
Identities = 278/673 (41%), Positives = 415/673 (61%), Gaps = 20/673 (2%)
Query: 61 GRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRF 120
GR V G V+ TG D V +G L++M+ K CG I A RVF M +++ V+WN M+T
Sbjct: 332 GREVHGHVITTGLVDFMVGIGNGLVNMYAK-CGSIADARRVFYFMTDKDSVSWNSMITGL 390
Query: 121 AQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDL 180
Q G ++++ + M P FTL S+L++CA L+ +G+Q+H ++ G+ L++
Sbjct: 391 DQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNV 450
Query: 181 CVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCD 240
V +L+ +YA+ G L + R++F+SMPEH+ VSW ++I R EA+ F +
Sbjct: 451 SVSNALMTLYAET---GYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLN 507
Query: 241 MLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGR 300
+ N TFSSVL A ++L G+Q+H +K ++ N+LI Y + G
Sbjct: 508 AQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGE 567
Query: 301 LECARKCFDLLFEK-------SLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTY 353
++ K F + E+ S++S +++ + L+ + TG SF Y
Sbjct: 568 MDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQ-----TGQRLDSFMY 622
Query: 354 ACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGD 413
A +LS A + T+ +G ++HA V++ E+++ + +AL+ MYSKCG + AL+ FN M
Sbjct: 623 ATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPV 682
Query: 414 RNVITWTSIISGFAKHGYATKALELFYEM-LETGVKPNDVTYIAVLSACSHVGLIDEGWK 472
RN +W S+ISG+A+HG +AL+LF M L+ P+ VT++ VLSACSH GL++EG+K
Sbjct: 683 RNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFK 742
Query: 473 HFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSC-RV 531
HF SM +G+ PR+EH++CM DVLGR+G L + +FI MP+ + ++WR++LG+C R
Sbjct: 743 HFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRA 802
Query: 532 HG-NTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGY 590
+G ELG+ AA+M+ + EP + Y+LL N+YA RW D+ RK MK + KEAGY
Sbjct: 803 NGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGY 862
Query: 591 SWIEVENQVHKFHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTDFVLHDVEDEQKEQY 650
SW+ +++ VH F GD SHP A IY +L EL K++ GYVP T F L+D+E E KE+
Sbjct: 863 SWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEI 922
Query: 651 LFQHSEKIAVAFALISIPNPK-PIRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFH 709
L HSEK+AVAF L + + PIRI KNLRVCGDCH+A KYISK+ GR I++RD+NRFH
Sbjct: 923 LSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFH 982
Query: 710 HIKDGTCSCNDYW 722
H +DG CSC+D+W
Sbjct: 983 HFQDGACSCSDFW 995
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 153/540 (28%), Positives = 260/540 (48%), Gaps = 31/540 (5%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACS--NSLYFSVGR 62
R+ VSW ++S ++ N EALV DM++ G + N+Y F + LRAC S+ GR
Sbjct: 65 RNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGR 124
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
+ G + K Y V V LI M+ K G + A F ++ +N V+WN +++ ++Q
Sbjct: 125 QIHGLMFKLSYAVDAV-VSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQ 183
Query: 123 MGYPEDSIDLFFRMLLSGYTPDRFTLTSAL-TACAELEL-LSVGKQLHSWVIRSGLALDL 180
G + +F M G P +T S + TAC+ E + + +Q+ + +SGL DL
Sbjct: 184 AGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDL 243
Query: 181 CVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCD 240
VG LV +AK GSL +R+VFN M N V+ L+ G VR E EA +LF D
Sbjct: 244 FVGSGLVSAFAK---SGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGE-EATKLFMD 299
Query: 241 MLQG-NVAPNGFTFSSVLKACANLPDFGF--------GEQLHSQTIKLGL-SAVNCVANS 290
M +V+P + ++ P++ G ++H I GL + + N
Sbjct: 300 MNSMIDVSPESYVI-----LLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNG 354
Query: 291 LINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRD---LNSDETLNHETEHTTGIG 347
L+NMYA+ G + AR+ F + +K VS +++ + ++ + + E H G
Sbjct: 355 LVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPG 414
Query: 348 ACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQV 407
SFT LS A + G+QIH +K G + N+S++NAL+++Y++ G ++
Sbjct: 415 --SFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKI 472
Query: 408 FNDMGDRNVITWTSIISGFAKHGYA-TKALELFYEMLETGVKPNDVTYIAVLSACSHVGL 466
F+ M + + ++W SII A+ + +A+ F G K N +T+ +VLSA S +
Sbjct: 473 FSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSF 532
Query: 467 IDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLL 526
+ G K + + + + ++ G+ G + + + M D + W S++
Sbjct: 533 GELG-KQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMI 591
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 131/476 (27%), Positives = 241/476 (50%), Gaps = 20/476 (4%)
Query: 65 FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG 124
F S L D V + LI+ +++ GD SA +VF++M RN V+W +++ +++ G
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLE-TGDSVSARKVFDEMPLRNCVSWACIVSGYSRNG 81
Query: 125 YPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSV--GKQLHSWVIRSGLALDLCV 182
++++ M+ G +++ S L AC E+ + + G+Q+H + + A+D V
Sbjct: 82 EHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVV 141
Query: 183 GCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDML 242
L+ MY KC GS+ + F + N VSW ++I+ Y + +G ++ A R+F M
Sbjct: 142 SNVLISMYWKCI--GSVGYALCAFGDIEVKNSVSWNSIISVYSQ-AGDQRSAFRIFSSMQ 198
Query: 243 QGNVAPNGFTFSSVLKACANL--PDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGR 300
P +TF S++ +L PD EQ+ K GL V + L++ +A+SG
Sbjct: 199 YDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGS 258
Query: 301 LECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSG- 359
L ARK F+ + ++ V+ ++ +VR +E + + I +Y LLS
Sbjct: 259 LSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSF 318
Query: 360 -----AACIGTIGKGEQIHALVVKSGF-ETNLSINNALISMYSKCGNKEAALQVFNDMGD 413
A +G + KG ++H V+ +G + + I N L++MY+KCG+ A +VF M D
Sbjct: 319 PEYSLAEEVG-LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTD 377
Query: 414 RNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWK- 472
++ ++W S+I+G ++G +A+E + M + P T I+ LS+C+ + G +
Sbjct: 378 KDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQI 437
Query: 473 HFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGS 528
H S++ G+ V ++ + +G L+E + +SMP + D + W S++G+
Sbjct: 438 HGESLK--LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGA 490
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 195/410 (47%), Gaps = 24/410 (5%)
Query: 167 LHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVR 226
HS + ++ L D+ + +L++ Y + G V +R+VF+ MP N VSW +++GY R
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLET---GDSVSARKVFDEMPLRNCVSWACIVSGYSR 79
Query: 227 GSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFG--FGEQLHSQTIKLGLSAV 284
+G+ +EA+ DM++ + N + F SVL+AC + G FG Q+H KL +
Sbjct: 80 -NGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVD 138
Query: 285 NCVANSLINMYARS-GRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN-HETEH 342
V+N LI+MY + G + A F + K+ VS +I+ V + + +
Sbjct: 139 AVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQ 198
Query: 343 TTGIGACSFTYACLLSGAACIGT--IGKGEQIHALVVKSGFETNLSINNALISMYSKCGN 400
G +T+ L++ A + + EQI + KSG T+L + + L+S ++K G+
Sbjct: 199 YDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGS 258
Query: 401 KEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSA 460
A +VFN M RN +T ++ G + + +A +LF +M + + + +Y+ +LS+
Sbjct: 259 LSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM-NSMIDVSPESYVILLSS 317
Query: 461 CSHVGLIDEGWKHFNSMRHCHGVVPRVEHYAC-----MVDVLGRSGLLSEAIEFINSMPL 515
L +E H H + + + +V++ + G +++A M
Sbjct: 318 FPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMT- 376
Query: 516 DADAMVWRSLLGSCRVHG-NTELGEHAAKMILEREPHD--PATYILLSNL 562
D D++ W S++ +G E E M HD P ++ L+S+L
Sbjct: 377 DKDSVSWNSMITGLDQNGCFIEAVERYKSM----RRHDILPGSFTLISSL 422
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 116/245 (47%), Gaps = 8/245 (3%)
Query: 1 MGSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSV 60
M +RD V+W SM+S + +N + +AL ML+ G + + + L A ++
Sbjct: 578 MAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLER 637
Query: 61 GRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRF 120
G V ++ +S V VG L+DM+ K CG ++ A R F M RN +WN M++ +
Sbjct: 638 GMEVHACSVRA-CLESDVVVGSALVDMYSK-CGRLDYALRFFNTMPVRNSYSWNSMISGY 695
Query: 121 AQMGYPEDSIDLFFRMLLSGYT-PDRFTLTSALTACAELELLSVG-KQLHSWVIRSGLAL 178
A+ G E+++ LF M L G T PD T L+AC+ LL G K S GLA
Sbjct: 696 ARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAP 755
Query: 179 DLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMP-EHNVVSWTALIAGYVRGSGQEQEAMRL 237
+ + D+ + G L MP + NV+ W ++ R +G++ E +
Sbjct: 756 RIEHFSCMADVLGRA---GELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKK 812
Query: 238 FCDML 242
+ML
Sbjct: 813 AAEML 817
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 135/301 (44%), Gaps = 12/301 (3%)
Query: 267 GFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVI 326
G HS+ K L + N+LIN Y +G ARK FD + ++ VS IV
Sbjct: 18 GAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGY 77
Query: 327 VRDLNSDETLNHETEHTT-GIGACSFTYACLLSGAACIGTIGK--GEQIHALVVKSGFET 383
R+ E L + GI + + + +L IG++G G QIH L+ K +
Sbjct: 78 SRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAV 137
Query: 384 NLSINNALISMYSKC-GNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEM 442
+ ++N LISMY KC G+ AL F D+ +N ++W SIIS +++ G A +F M
Sbjct: 138 DAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSM 197
Query: 443 LETGVKPNDVTYIA-VLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSG 501
G +P + T+ + V +ACS + G++ + + +V +SG
Sbjct: 198 QYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSG 257
Query: 502 LLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPH---DPATYIL 558
LS A + N M + ++G R + GE A K+ ++ P +Y++
Sbjct: 258 SLSYARKVFNQMETRNAVTLNGLMVGLVR----QKWGEEATKLFMDMNSMIDVSPESYVI 313
Query: 559 L 559
L
Sbjct: 314 L 314
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 64/107 (59%)
Query: 361 ACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWT 420
+C+G G H+ + K+ + ++ + N LI+ Y + G+ +A +VF++M RN ++W
Sbjct: 12 SCVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWA 71
Query: 421 SIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLI 467
I+SG++++G +AL +M++ G+ N +++VL AC +G +
Sbjct: 72 CIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV 118
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 515 bits (1326), Expect = e-146, Method: Compositional matrix adjust.
Identities = 288/762 (37%), Positives = 429/762 (56%), Gaps = 55/762 (7%)
Query: 10 WCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVL 69
W S++ + +N ++ L F M + P+ Y F +AC G L
Sbjct: 95 WNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSL 154
Query: 70 KTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDS 129
TG F S+V VG L+ M+ + C + A +VF++M +VV+WN ++ +A++G P+ +
Sbjct: 155 VTG-FISNVFVGNALVAMYSR-CRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVA 212
Query: 130 IDLFFRMLLS-GYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVD 188
+++F RM G PD TL + L CA L S+GKQLH + + S + ++ VG LVD
Sbjct: 213 LEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVD 272
Query: 189 MYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLF---------- 238
MYAKC G + ++ VF++M +VVSW A++AGY + G+ ++A+RLF
Sbjct: 273 MYAKC---GMMDEANTVFSNMSVKDVVSWNAMVAGYSQ-IGRFEDAVRLFEKMQEEKIKM 328
Query: 239 ------------------------C-DMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLH 273
C ML + PN T SVL CA++ G+++H
Sbjct: 329 DVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIH 388
Query: 274 SQTIKL-------GLSAVNCVANSLINMYARSGRLECARKCFDLLF--EKSLVSCETIVD 324
IK G N V N LI+MYA+ +++ AR FD L E+ +V+ ++
Sbjct: 389 CYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIG 448
Query: 325 VIVRDLNSD---ETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGF 381
+ +++ E L+ E +FT +C L A + + G+QIHA +++
Sbjct: 449 GYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQ 508
Query: 382 ET-NLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFY 440
L ++N LI MY+KCG+ A VF++M +N +TWTS+++G+ HGY +AL +F
Sbjct: 509 NAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFD 568
Query: 441 EMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRS 500
EM G K + VT + VL ACSH G+ID+G ++FN M+ GV P EHYAC+VD+LGR+
Sbjct: 569 EMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRA 628
Query: 501 GLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLS 560
G L+ A+ I MP++ +VW + L CR+HG ELGE+AA+ I E + +Y LLS
Sbjct: 629 GRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLS 688
Query: 561 NLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELD 620
NLYA RW DV IR M+ K + K G SW+E F VGD +HP A++IY L
Sbjct: 689 NLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLL 748
Query: 621 ELASKIKKLGYVPNTDFVLHDVEDEQKEQYLFQHSEKIAVAFALISIPNPKPIRIFKNLR 680
+ +IK +GYVP T F LHDV+DE+K+ LF+HSEK+A+A+ +++ P IRI KNLR
Sbjct: 749 DHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLR 808
Query: 681 VCGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGTCSCNDYW 722
VCGDCHTA Y+S++ I++RD++RFHH K+G+CSC YW
Sbjct: 809 VCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 173 bits (438), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 132/479 (27%), Positives = 221/479 (46%), Gaps = 55/479 (11%)
Query: 107 ERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQ 166
+ V WN ++ + G + LF M +TPD +T AC E+ + G+
Sbjct: 89 DAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGES 148
Query: 167 LHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVR 226
H+ + +G ++ VG +LV MY++C SL D+R+VF+ M +VVSW ++I Y +
Sbjct: 149 AHALSLVTGFISNVFVGNALVAMYSRCR---SLSDARKVFDEMSVWDVVSWNSIIESYAK 205
Query: 227 GSGQEQEAMRLFCDML-QGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVN 285
G+ + A+ +F M + P+ T +VL CA+L G+QLH + +
Sbjct: 206 -LGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNM 264
Query: 286 CVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIV---------------------- 323
V N L++MYA+ G ++ A F + K +VS +V
Sbjct: 265 FVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEE 324
Query: 324 ----DVIV----------RDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKG 369
DV+ R L + ++GI T +LSG A +G + G
Sbjct: 325 KIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHG 384
Query: 370 EQIHALVV-------KSGFETNLSINNALISMYSKCGNKEAALQVFNDMG--DRNVITWT 420
++IH + K+G + N LI MY+KC + A +F+ + +R+V+TWT
Sbjct: 385 KEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWT 444
Query: 421 SIISGFAKHGYATKALELFYEMLETG--VKPNDVTYIAVLSACSHVGLIDEGWK-HFNSM 477
+I G+++HG A KALEL EM E +PN T L AC+ + + G + H ++
Sbjct: 445 VMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYAL 504
Query: 478 RHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTE 536
R+ VP C++D+ + G +S+A ++M + + + W SL+ +HG E
Sbjct: 505 RNQQNAVPLFVS-NCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMHGYGE 561
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/326 (32%), Positives = 174/326 (53%), Gaps = 33/326 (10%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
K D+V+W + +S +A + +EAL ML G PNE + L C+ SVG +
Sbjct: 327 KMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCA-----SVGAL 381
Query: 64 VFGSVL------------KTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKM--QERN 109
+ G + K G+ D ++ + +LIDM+ K C +++A +F+ + +ER+
Sbjct: 382 MHGKEIHCYAIKYPIDLRKNGHGDENMVIN-QLIDMYAK-CKKVDTARAMFDSLSPKERD 439
Query: 110 VVTWNLMMTRFAQMGYPEDSIDLFFRMLLSG--YTPDRFTLTSALTACAELELLSVGKQL 167
VVTW +M+ ++Q G +++L M P+ FT++ AL ACA L L +GKQ+
Sbjct: 440 VVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQI 499
Query: 168 HSWVIRSGL-ALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGY-V 225
H++ +R+ A+ L V L+DMYAKC GS+ D+R VF++M N V+WT+L+ GY +
Sbjct: 500 HAYALRNQQNAVPLFVSNCLIDMYAKC---GSISDARLVFDNMMAKNEVTWTSLMTGYGM 556
Query: 226 RGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACAN--LPDFGFGEQLHSQTIKLGLSA 283
G G +EA+ +F +M + +G T VL AC++ + D G E + G+S
Sbjct: 557 HGYG--EEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGM-EYFNRMKTVFGVSP 613
Query: 284 VNCVANSLINMYARSGRLECARKCFD 309
L+++ R+GRL A + +
Sbjct: 614 GPEHYACLVDLLGRAGRLNAALRLIE 639
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 512 bits (1318), Expect = e-145, Method: Compositional matrix adjust.
Identities = 272/717 (37%), Positives = 421/717 (58%), Gaps = 10/717 (1%)
Query: 8 VSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGS 67
V + +M+ FA S +AL F+ M P Y FT L+ C + VG+ + G
Sbjct: 101 VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 160
Query: 68 VLKTGY-FDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYP 126
++K+G+ D G E +M+ K C + A +VF++M ER++V+WN ++ ++Q G
Sbjct: 161 LVKSGFSLDLFAMTGLE--NMYAK-CRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMA 217
Query: 127 EDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSL 186
++++ M P T+ S L A + L L+SVGK++H + +RSG + + +L
Sbjct: 218 RMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTAL 277
Query: 187 VDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNV 246
VDMYAKC GSL +R++F+ M E NVVSW ++I YV+ +EAM +F ML V
Sbjct: 278 VDMYAKC---GSLETARQLFDGMLERNVVSWNSMIDAYVQNE-NPKEAMLIFQKMLDEGV 333
Query: 247 APNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARK 306
P + L ACA+L D G +H +++LGL V NSLI+MY + ++ A
Sbjct: 334 KPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAAS 393
Query: 307 CFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETE-HTTGIGACSFTYACLLSGAACIGT 365
F L ++LVS ++ ++ + LN+ ++ + + +FTY +++ A +
Sbjct: 394 MFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSI 453
Query: 366 IGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISG 425
+ IH +V++S + N+ + AL+ MY+KCG A +F+ M +R+V TW ++I G
Sbjct: 454 THHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDG 513
Query: 426 FAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVP 485
+ HG+ ALELF EM + +KPN VT+++V+SACSH GL++ G K F M+ + +
Sbjct: 514 YGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIEL 573
Query: 486 RVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMI 545
++HY MVD+LGR+G L+EA +FI MP+ V+ ++LG+C++H N E AA+ +
Sbjct: 574 SMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERL 633
Query: 546 LEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVG 605
E P D ++LL+N+Y W V +R +M ++ + K G S +E++N+VH F G
Sbjct: 634 FELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSG 693
Query: 606 DTSHPQAQKIYDELDELASKIKKLGYVPNTDFVLHDVEDEQKEQYLFQHSEKIAVAFALI 665
T+HP ++KIY L++L IK+ GYVP+T+ VL VE++ KEQ L HSEK+A++F L+
Sbjct: 694 STAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLL 752
Query: 666 SIPNPKPIRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGTCSCNDYW 722
+ I + KNLRVC DCH A KYIS VTGR IVVRD RFHH K+G CSC DYW
Sbjct: 753 NTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 235 bits (600), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 140/474 (29%), Positives = 247/474 (52%), Gaps = 11/474 (2%)
Query: 62 RVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFA 121
R + V K G + H +L+ +F + G ++ A RVFE + + V ++ M+ FA
Sbjct: 54 RQILPLVFKNGLYQEHF-FQTKLVSLFCR-YGSVDEAARVFEPIDSKLNVLYHTMLKGFA 111
Query: 122 QMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLC 181
++ + ++ F RM P + T L C + L VGK++H +++SG +LDL
Sbjct: 112 KVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLF 171
Query: 182 VGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDM 241
L +MYAKC + ++R+VF+ MPE ++VSW ++AGY + +G + A+ + M
Sbjct: 172 AMTGLENMYAKCR---QVNEARKVFDRMPERDLVSWNTIVAGYSQ-NGMARMALEMVKSM 227
Query: 242 LQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRL 301
+ N+ P+ T SVL A + L G+++H ++ G ++ ++ +L++MYA+ G L
Sbjct: 228 CEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSL 287
Query: 302 ECARKCFDLLFEKSLVSCETIVDVIVRDLNSDET-LNHETEHTTGIGACSFTYACLLSGA 360
E AR+ FD + E+++VS +++D V++ N E L + G+ + L
Sbjct: 288 ETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHAC 347
Query: 361 ACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWT 420
A +G + +G IH L V+ G + N+S+ N+LISMY KC + A +F + R +++W
Sbjct: 348 ADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWN 407
Query: 421 SIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEG-WKHFNSMRH 479
++I GFA++G AL F +M VKP+ TY++V++A + + + W H MR
Sbjct: 408 AMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRS 467
Query: 480 CHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHG 533
C + V +VD+ + G + A I M + W +++ HG
Sbjct: 468 C--LDKNVFVTTALVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMIDGYGTHG 518
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 135/464 (29%), Positives = 221/464 (47%), Gaps = 50/464 (10%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
+RDLVSW ++++ ++ N M AL M E P+ + L A S SVG+
Sbjct: 198 ERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKE 257
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
+ G +++G FDS V++ L+DM+ K CG +E+A ++F+ M ERNVV+WN M+ + Q
Sbjct: 258 IHGYAMRSG-FDSLVNISTALVDMYAK-CGSLETARQLFDGMLERNVVSWNSMIDAYVQN 315
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVG 183
P++++ +F +ML G P ++ AL ACA+L L G+ +H + GL ++ V
Sbjct: 316 ENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVV 375
Query: 184 CSLVDMYAKCA-VDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDML 242
SL+ MY KC VD + +F + +VSW A+I G+ + +G+ +A+ F M
Sbjct: 376 NSLISMYCKCKEVD----TAASMFGKLQSRTLVSWNAMILGFAQ-NGRPIDALNYFSQMR 430
Query: 243 QGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLE 302
V P+ FT+ SV+ A A L + +H ++ L V +L++MYA+ G +
Sbjct: 431 SRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIM 490
Query: 303 CARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGAAC 362
AR FD++ E+ + + ++D G G F A L
Sbjct: 491 IARLIFDMMSERHVTTWNAMID--------------------GYGTHGFGKAAL------ 524
Query: 363 IGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVIT---- 418
E++ +K T LS+ IS S G EA L+ F M + I
Sbjct: 525 ----ELFEEMQKGTIKPNGVTFLSV----ISACSHSGLVEAGLKCFYMMKENYSIELSMD 576
Query: 419 -WTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSAC 461
+ +++ + G +A + +M VKP Y A+L AC
Sbjct: 577 HYGAMVDLLGRAGRLNEAWDFIMQM---PVKPAVNVYGAMLGAC 617
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 510 bits (1313), Expect = e-144, Method: Compositional matrix adjust.
Identities = 273/738 (36%), Positives = 438/738 (59%), Gaps = 25/738 (3%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLY---FS 59
S+R+ VSW S++S + AL F ML+ P+ + + + ACSN
Sbjct: 160 SERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLM 219
Query: 60 VGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTR 119
+G+ V L+ G +S + L+ M+ K G + S+ + R++VTWN +++
Sbjct: 220 MGKQVHAYGLRKGELNSFII--NTLVAMYGK-LGKLASSKVLLGSFGGRDLVTWNTVLSS 276
Query: 120 FAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSG-LAL 178
Q ++++ M+L G PD FT++S L AC+ LE+L GK+LH++ +++G L
Sbjct: 277 LCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDE 336
Query: 179 DLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLF 238
+ VG +LVDMY C ++ RRVF+ M + + W A+IAGY + ++EA+ LF
Sbjct: 337 NSFVGSALVDMYCNCK---QVLSGRRVFDGMFDRKIGLWNAMIAGYSQNE-HDKEALLLF 392
Query: 239 CDMLQ-GNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYAR 297
M + + N T + V+ AC F E +H +K GL V N+L++MY+R
Sbjct: 393 IGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSR 452
Query: 298 SGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETL-------NHETEHTTG----- 345
G+++ A + F + ++ LV+ T++ V + ++ L N E + + G
Sbjct: 453 LGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVS 512
Query: 346 IGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAAL 405
+ S T +L A + + KG++IHA +K+ T++++ +AL+ MY+KCG + +
Sbjct: 513 LKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSR 572
Query: 406 QVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVG 465
+VF+ + +NVITW II + HG +A++L M+ GVKPN+VT+I+V +ACSH G
Sbjct: 573 KVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSG 632
Query: 466 LIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDAD-AMVWRS 524
++DEG + F M+ +GV P +HYAC+VD+LGR+G + EA + +N MP D + A W S
Sbjct: 633 MVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSS 692
Query: 525 LLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKI 584
LLG+ R+H N E+GE AA+ +++ EP+ + Y+LL+N+Y++ W +R+ MK++ +
Sbjct: 693 LLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGV 752
Query: 585 IKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTDFVLHDVED 644
KE G SWIE ++VHKF GD+SHPQ++K+ L+ L +++K GYVP+T VLH+VE+
Sbjct: 753 RKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEE 812
Query: 645 EQKEQYLFQHSEKIAVAFALISIPNPKPIRIFKNLRVCGDCHTAIKYISKVTGRVIVVRD 704
++KE L HSEK+A+AF +++ IR+ KNLRVC DCH A K+ISK+ R I++RD
Sbjct: 813 DEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRD 872
Query: 705 ANRFHHIKDGTCSCNDYW 722
RFH K+GTCSC DYW
Sbjct: 873 VRRFHRFKNGTCSCGDYW 890
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 151/554 (27%), Positives = 287/554 (51%), Gaps = 25/554 (4%)
Query: 10 WCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVL 69
W ++ +++ EA++T++DM+ G P+ Y F A L+A ++ +G+ + V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 70 KTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDS 129
K GY V+V L++++ K CGD + ++VF+++ ERN V+WN +++ E +
Sbjct: 125 KFGYGVDSVTVANTLVNLYRK-CGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 183
Query: 130 IDLFFRMLLSGYTPDRFTLTSALTACAELEL---LSVGKQLHSWVIRSGLALDLCVGCSL 186
++ F ML P FTL S +TAC+ L + L +GKQ+H++ +R G L+ + +L
Sbjct: 184 LEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTL 242
Query: 187 VDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNV 246
V MY K G L S+ + S ++V+W +++ + Q EA+ +M+ V
Sbjct: 243 VAMYGKL---GKLASSKVLLGSFGGRDLVTWNTVLSSLCQNE-QLLEALEYLREMVLEGV 298
Query: 247 APNGFTFSSVLKACANLPDFGFGEQLHSQTIKLG-LSAVNCVANSLINMYARSGRLECAR 305
P+ FT SSVL AC++L G++LH+ +K G L + V ++L++MY ++ R
Sbjct: 299 EPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGR 358
Query: 306 KCFDLLFEKSLVSCETIVDVIVRDLNSDETLNH--ETEHTTGIGACSFTYACLLSGAACI 363
+ FD +F++ + ++ ++ + E L E + G+ A S T A ++
Sbjct: 359 RVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRS 418
Query: 364 GTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSII 423
G + E IH VVK G + + + N L+ MYS+ G + A+++F M DR+++TW ++I
Sbjct: 419 GAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMI 478
Query: 424 SGFAKHGYATKALELFYEM--LETGV---------KPNDVTYIAVLSACSHVGLIDEGWK 472
+G+ + AL L ++M LE V KPN +T + +L +C+ + + +G K
Sbjct: 479 TGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKG-K 537
Query: 473 HFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVH 532
++ + + V + +VD+ + G L + + + +P + + W ++ + +H
Sbjct: 538 EIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMH 596
Query: 533 GNTELGEHAAKMIL 546
GN + +M++
Sbjct: 597 GNGQEAIDLLRMMM 610
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/436 (26%), Positives = 216/436 (49%), Gaps = 30/436 (6%)
Query: 106 QERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGK 165
Q R+ W ++ + +++ + M++ G PD + + L A A+L+ + +GK
Sbjct: 58 QSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGK 117
Query: 166 QLHSWVIRSGLALD-LCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGY 224
Q+H+ V + G +D + V +LV++Y KC G++ +VF+ + E N VSW +LI+
Sbjct: 118 QIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVY---KVFDRISERNQVSWNSLISSL 174
Query: 225 VRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLP---DFGFGEQLHSQTIKLGL 281
E A+ F ML NV P+ FT SV+ AC+NLP G+Q+H+ ++ G
Sbjct: 175 CSFEKWEM-ALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG- 232
Query: 282 SAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETE 341
+ + N+L+ MY + G+L ++ + LV+ T++ + ++ E L + E
Sbjct: 233 ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLRE 292
Query: 342 HT-TGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSG-FETNLSINNALISMYSKCG 399
G+ FT + +L + + + G+++HA +K+G + N + +AL+ MY C
Sbjct: 293 MVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCK 352
Query: 400 NKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLET-GVKPNDVTYIAVL 458
+ +VF+ M DR + W ++I+G++++ + +AL LF M E+ G+ N T V+
Sbjct: 353 QVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVV 412
Query: 459 SACSHVGLIDEGWKHFNSMRHCHGVVPR--------VEHYACMVDVLGRSGLLSEAIEFI 510
AC G F+ HG V + V++ ++D+ R G + A+
Sbjct: 413 PACVRSG-------AFSRKEAIHGFVVKRGLDRDRFVQN--TLMDMYSRLGKIDIAMRIF 463
Query: 511 NSMPLDADAMVWRSLL 526
M D D + W +++
Sbjct: 464 GKME-DRDLVTWNTMI 478
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 111/209 (53%), Gaps = 10/209 (4%)
Query: 345 GIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETN-LSINNALISMYSKCGNKEA 403
GI ++ + LL A + + G+QIHA V K G+ + +++ N L+++Y KCG+ A
Sbjct: 92 GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 151
Query: 404 ALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSH 463
+VF+ + +RN ++W S+IS ALE F ML+ V+P+ T ++V++ACS+
Sbjct: 152 VYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 211
Query: 464 VGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVL----GRSGLLSEAIEFINSMPLDADA 519
+ + EG H +G + + E + +++ L G+ G L+ + + S D
Sbjct: 212 LPM-PEGLM-MGKQVHAYG-LRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFG-GRDL 267
Query: 520 MVWRSLLGS-CRVHGNTELGEHAAKMILE 547
+ W ++L S C+ E E+ +M+LE
Sbjct: 268 VTWNTVLSSLCQNEQLLEALEYLREMVLE 296
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 509 bits (1312), Expect = e-144, Method: Compositional matrix adjust.
Identities = 271/694 (39%), Positives = 417/694 (60%), Gaps = 65/694 (9%)
Query: 93 GDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSAL 152
GD++S F+++ +R+ V+W M+ + +G +I + M+ G P +FTLT+ L
Sbjct: 94 GDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVL 153
Query: 153 TACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCA--VDGSLVDSRRV----- 205
+ A + GK++HS++++ GL ++ V SL++MYAKC + V R V
Sbjct: 154 ASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDIS 213
Query: 206 ---------------------FNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQG 244
F M E ++V+W ++I+G+ + G + A+ +F ML+
Sbjct: 214 SWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQ-RGYDLRALDIFSKMLRD 272
Query: 245 NV-APNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLEC 303
++ +P+ FT +SVL ACANL G+Q+HS + G V N+LI+MY+R G +E
Sbjct: 273 SLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVET 332
Query: 304 ARKCFDLLFEKSLV--SCETIVDVIVR--DLNSDETL-----------------NHETEH 342
AR+ + K L ++D ++ D+N + + +E
Sbjct: 333 ARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHG 392
Query: 343 TTG---------IGAC----SFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINN 389
+ G +G S+T A +LS A+ + ++ G+QIH VKSG ++S++N
Sbjct: 393 SYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSN 452
Query: 390 ALISMYSKCGNKEAALQVFNDMG-DRNVITWTSIISGFAKHGYATKALELFYEMLETGVK 448
ALI+MY+K GN +A + F+ + +R+ ++WTS+I A+HG+A +ALELF ML G++
Sbjct: 453 ALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLR 512
Query: 449 PNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIE 508
P+ +TY+ V SAC+H GL+++G ++F+ M+ ++P + HYACMVD+ GR+GLL EA E
Sbjct: 513 PDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQE 572
Query: 509 FINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEER 568
FI MP++ D + W SLL +CRVH N +LG+ AA+ +L EP + Y L+NLY+ +
Sbjct: 573 FIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGK 632
Query: 569 WYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELDELASKIKK 628
W + A IRK+MK ++ KE G+SWIEV+++VH F V D +HP+ +IY + ++ +IKK
Sbjct: 633 WEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKK 692
Query: 629 LGYVPNTDFVLHDVEDEQKEQYLFQHSEKIAVAFALISIPNPKPIRIFKNLRVCGDCHTA 688
+GYVP+T VLHD+E+E KEQ L HSEK+A+AF LIS P+ +RI KNLRVC DCHTA
Sbjct: 693 MGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTA 752
Query: 689 IKYISKVTGRVIVVRDANRFHHIKDGTCSCNDYW 722
IK+ISK+ GR I+VRD RFHH KDG CSC DYW
Sbjct: 753 IKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 140/492 (28%), Positives = 241/492 (48%), Gaps = 69/492 (14%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
+RD VSW +M+ + N H+A+ DM++ G P ++ T L + + + G+
Sbjct: 108 QRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKK 167
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGD----------------------------- 94
V ++K G +VSV L++M+ K CGD
Sbjct: 168 VHSFIVKLG-LRGNVSVSNSLLNMYAK-CGDPMMAKFVFDRMVVRDISSWNAMIALHMQV 225
Query: 95 --IESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLL-SGYTPDRFTLTSA 151
++ A FE+M ER++VTWN M++ F Q GY ++D+F +ML S +PDRFTL S
Sbjct: 226 GQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASV 285
Query: 152 LTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCA----------------- 194
L+ACA LE L +GKQ+HS ++ +G + V +L+ MY++C
Sbjct: 286 LSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDL 345
Query: 195 -VDG--SLVD----------SRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDM 241
++G +L+D ++ +F S+ + +VV+WTA+I GY + G EA+ LF M
Sbjct: 346 KIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQ-HGSYGEAINLFRSM 404
Query: 242 LQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRL 301
+ G PN +T +++L ++L G+Q+H +K G V+N+LI MYA++G +
Sbjct: 405 VGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNI 464
Query: 302 ECARKCFDLLF-EKSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSG 359
A + FDL+ E+ VS +++ + + +++E L ET G+ TY + S
Sbjct: 465 TSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSA 524
Query: 360 AACIGTIGKGEQIHALVVK-SGFETNLSINNALISMYSKCGNKEAALQVFNDMG-DRNVI 417
G + +G Q ++ LS ++ ++ + G + A + M + +V+
Sbjct: 525 CTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVV 584
Query: 418 TWTSIISGFAKH 429
TW S++S H
Sbjct: 585 TWGSLLSACRVH 596
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 117/456 (25%), Positives = 195/456 (42%), Gaps = 88/456 (19%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFY-PNEYCFTAALRACSNSLYFSVG 61
++RD+V+W SM+S F + AL F ML P+ + + L AC+N +G
Sbjct: 239 AERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIG 298
Query: 62 RVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEK----------------- 104
+ + ++ TG FD V LI M+ + CG +E+A R+ E+
Sbjct: 299 KQIHSHIVTTG-FDISGIVLNALISMYSR-CGGVETARRLIEQRGTKDLKIEGFTALLDG 356
Query: 105 ----------------MQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTL 148
+++R+VV W M+ + Q G ++I+LF M+ G P+ +TL
Sbjct: 357 YIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTL 416
Query: 149 TSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNS 208
+ L+ + L LS GKQ+H ++SG + V +L+ MYAK G++ + R F+
Sbjct: 417 AAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKA---GNITSASRAFDL 473
Query: 209 MP-EHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFG 267
+ E + VSWT++I + G +EA+ LF ML + P+ T+ V AC +
Sbjct: 474 IRCERDTVSWTSMIIALAQ-HGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVN 532
Query: 268 FGEQLHS-----QTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETI 322
G Q I LS C +++++ R+G L+ A++ EK + + +
Sbjct: 533 QGRQYFDMMKDVDKIIPTLSHYAC----MVDLFGRAGLLQEAQE----FIEKMPIEPDVV 584
Query: 323 VDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTI--GKGEQIHALVVKSG 380
T+ LLS I GK L+++
Sbjct: 585 -----------------------------TWGSLLSACRVHKNIDLGKVAAERLLLLEP- 614
Query: 381 FETNLSINNALISMYSKCGNKEAALQVFNDMGDRNV 416
N +AL ++YS CG E A ++ M D V
Sbjct: 615 --ENSGAYSALANLYSACGKWEEAAKIRKSMKDGRV 648
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 136/290 (46%), Gaps = 72/290 (24%)
Query: 247 APNGFTFSSVLKACANL-------PDFGFGEQL-HSQTIKLGLSAVNCVANSLINMYARS 298
AP + S++L+ C NL + F QL H + IK GL + N+L+N+Y+++
Sbjct: 3 APVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKT 62
Query: 299 GRLECARKCFDLLFEKSLVSCETIVDVIVR--DLNS-----DETLNHETEHTT------- 344
G ARK FD + ++ S T++ + D++S D+ ++ T
Sbjct: 63 GYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYK 122
Query: 345 ------------------GIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLS 386
GI FT +L+ A + G+++H+ +VK G N+S
Sbjct: 123 NIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVS 182
Query: 387 INNALISMYSKCGNK-------------------------------EAALQVFNDMGDRN 415
++N+L++MY+KCG+ + A+ F M +R+
Sbjct: 183 VSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERD 242
Query: 416 VITWTSIISGFAKHGYATKALELFYEML-ETGVKPNDVTYIAVLSACSHV 464
++TW S+ISGF + GY +AL++F +ML ++ + P+ T +VLSAC+++
Sbjct: 243 IVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANL 292
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 49/84 (58%)
Query: 389 NALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVK 448
N ++S YSK G+ ++ + F+ + R+ ++WT++I G+ G KA+ + +M++ G++
Sbjct: 84 NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIE 143
Query: 449 PNDVTYIAVLSACSHVGLIDEGWK 472
P T VL++ + ++ G K
Sbjct: 144 PTQFTLTNVLASVAATRCMETGKK 167
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 509 bits (1310), Expect = e-144, Method: Compositional matrix adjust.
Identities = 274/723 (37%), Positives = 421/723 (58%), Gaps = 10/723 (1%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR 62
S+RD +SW S+ + +A N E+ F M N + L + + GR
Sbjct: 222 SERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGR 281
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
+ G V+K G FDS V V L+ M+ G G A+ VF++M +++++WN +M F
Sbjct: 282 GIHGLVVKMG-FDSVVCVCNTLLRMYA-GAGRSVEANLVFKQMPTKDLISWNSLMASFVN 339
Query: 123 MGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCV 182
G D++ L M+ SG + + T TSAL AC + G+ LH V+ SGL + +
Sbjct: 340 DGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQII 399
Query: 183 GCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDML 242
G +LV MY K G + +SRRV MP +VV+W ALI GY ++ A+ F M
Sbjct: 400 GNALVSMYGKI---GEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDK-ALAAFQTMR 455
Query: 243 QGNVAPNGFTFSSVLKACANLPD--FGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGR 300
V+ N T SVL AC LP G+ LH+ + G + V NSLI MYA+ G
Sbjct: 456 VEGVSSNYITVVSVLSACL-LPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGD 514
Query: 301 LECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETE-HTTGIGACSFTYACLLSG 359
L ++ F+ L +++++ ++ + +E L ++ + G+ F+++ LS
Sbjct: 515 LSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSA 574
Query: 360 AACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITW 419
AA + + +G+Q+H L VK GFE + I NA MYSKCG +++ +R++ +W
Sbjct: 575 AAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSW 634
Query: 420 TSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRH 479
+IS +HGY + F+EMLE G+KP VT++++L+ACSH GL+D+G +++ +
Sbjct: 635 NILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIAR 694
Query: 480 CHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGE 539
G+ P +EH C++D+LGRSG L+EA FI+ MP+ + +VWRSLL SC++HGN + G
Sbjct: 695 DFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGR 754
Query: 540 HAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQV 599
AA+ + + EP D + Y+L SN++AT RW DV +RK M K I K+ SW++++++V
Sbjct: 755 KAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKV 814
Query: 600 HKFHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTDFVLHDVEDEQKEQYLFQHSEKIA 659
F +GD +HPQ +IY +L+++ IK+ GYV +T L D ++EQKE L+ HSE++A
Sbjct: 815 SSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLA 874
Query: 660 VAFALISIPNPKPIRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGTCSCN 719
+A+AL+S P +RIFKNLR+C DCH+ K++S+V GR IV+RD RFHH + G CSC
Sbjct: 875 LAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCK 934
Query: 720 DYW 722
DYW
Sbjct: 935 DYW 937
Score = 213 bits (541), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 155/543 (28%), Positives = 265/543 (48%), Gaps = 12/543 (2%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNS-LYFSVGRV 63
R+ VSW +MMS + E + F M + G P+ + + + AC S F G
Sbjct: 21 RNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQ 80
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
V G V K+G S V V ++ ++ G + + +VFE+M +RNVV+W +M ++
Sbjct: 81 VHGFVAKSGLL-SDVYVSTAILHLY-GVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDK 138
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVG 183
G PE+ ID++ M G + +++ +++C L+ S+G+Q+ V++SGL L V
Sbjct: 139 GEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVE 198
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQ 243
SL+ M G++ + +F+ M E + +SW ++ A Y + +G +E+ R+F M +
Sbjct: 199 NSLISMLGSM---GNVDYANYIFDQMSERDTISWNSIAAAYAQ-NGHIEESFRIFSLMRR 254
Query: 244 GNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLEC 303
+ N T S++L ++ +G +H +K+G +V CV N+L+ MYA +GR
Sbjct: 255 FHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVE 314
Query: 304 ARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEH-TTGIGACSFTYACLLSGAAC 362
A F + K L+S +++ V D S + L ++G T+ L+
Sbjct: 315 ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFT 374
Query: 363 IGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSI 422
KG +H LVV SG N I NAL+SMY K G + +V M R+V+ W ++
Sbjct: 375 PDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNAL 434
Query: 423 ISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHG 482
I G+A+ KAL F M GV N +T ++VLSAC G + E K ++ G
Sbjct: 435 IGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAG 494
Query: 483 VVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAA 542
++ + + G LS + + N + + + + W ++L + HG+ GE
Sbjct: 495 FESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHHGH---GEEVL 550
Query: 543 KMI 545
K++
Sbjct: 551 KLV 553
Score = 195 bits (495), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 134/450 (29%), Positives = 222/450 (49%), Gaps = 34/450 (7%)
Query: 93 GDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSAL 152
G ++ A +F+ M RN V+WN MM+ ++G + ++ F +M G P F + S +
Sbjct: 6 GRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLV 65
Query: 153 TACAEL-ELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPE 211
TAC + G Q+H +V +SGL D+ V +++ +Y V G + SR+VF MP+
Sbjct: 66 TACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLY---GVYGLVSCSRKVFEEMPD 122
Query: 212 HNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQ 271
NVVSWT+L+ GY G+ +E + ++ M V N + S V+ +C L D G Q
Sbjct: 123 RNVVSWTSLMVGY-SDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQ 181
Query: 272 LHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLN 331
+ Q +K GL + V NSLI+M G ++ A FD + E+ +S +I ++ +
Sbjct: 182 IIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGH 241
Query: 332 SDETLN--------HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFET 383
+E+ H+ ++T T + LLS + G IH LVVK GF++
Sbjct: 242 IEESFRIFSLMRRFHDEVNST-------TVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDS 294
Query: 384 NLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEML 443
+ + N L+ MY+ G A VF M +++I+W S+++ F G + AL L M+
Sbjct: 295 VVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMI 354
Query: 444 ETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHY------ACMVDVL 497
+G N VT+ + L+AC ++G R HG+V + +V +
Sbjct: 355 SSGKSVNYVTFTSALAACFTPDFFEKG-------RILHGLVVVSGLFYNQIIGNALVSMY 407
Query: 498 GRSGLLSEAIEFINSMPLDADAMVWRSLLG 527
G+ G +SE+ + MP D + W +L+G
Sbjct: 408 GKIGEMSESRRVLLQMP-RRDVVAWNALIG 436
Score = 132 bits (332), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 169/348 (48%), Gaps = 20/348 (5%)
Query: 189 MYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAP 248
MY K G + +R +F+ MP N VSW +++G VR G E M F M + P
Sbjct: 1 MYTKF---GRVKPARHLFDIMPVRNEVSWNTMMSGIVR-VGLYLEGMEFFRKMCDLGIKP 56
Query: 249 NGFTFSSVLKACANLPD-FGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKC 307
+ F +S++ AC F G Q+H K GL + V+ +++++Y G + C+RK
Sbjct: 57 SSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKV 116
Query: 308 FDLLFEKSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGAACIGTI 366
F+ + ++++VS +++ +E ++ ++ G+G + + ++S +
Sbjct: 117 FEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDE 176
Query: 367 GKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGF 426
G QI VVKSG E+ L++ N+LISM GN + A +F+ M +R+ I+W SI + +
Sbjct: 177 SLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAY 236
Query: 427 AKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPR 486
A++G+ ++ +F M + N T +LS HV H R HG+V +
Sbjct: 237 AQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHV-------DHQKWGRGIHGLVVK 289
Query: 487 V--EHYACMVDVLGR----SGLLSEAIEFINSMPLDADAMVWRSLLGS 528
+ + C+ + L R +G EA MP D + W SL+ S
Sbjct: 290 MGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP-TKDLISWNSLMAS 336
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 499 bits (1286), Expect = e-141, Method: Compositional matrix adjust.
Identities = 267/708 (37%), Positives = 416/708 (58%), Gaps = 14/708 (1%)
Query: 20 NSMEHEALVT-FLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHV 78
+S ++ AL+ F DM+E ++ F L ++G+ V LK G D +
Sbjct: 292 HSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLG-LDLML 350
Query: 79 SVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLL 138
+V LI+M+ K A VF+ M ER++++WN ++ AQ G +++ LF ++L
Sbjct: 351 TVSNSLINMYCK-LRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLR 409
Query: 139 SGYTPDRFTLTSALTACAEL-ELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAK--CAV 195
G PD++T+TS L A + L E LS+ KQ+H I+ D V +L+D Y++ C
Sbjct: 410 CGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMK 469
Query: 196 DGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSS 255
+ ++ R F+ +V+W A++AGY + S + ++LF M + + FT ++
Sbjct: 470 EAEILFERHNFD------LVAWNAMMAGYTQ-SHDGHKTLKLFALMHKQGERSDDFTLAT 522
Query: 256 VLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKS 315
V K C L G+Q+H+ IK G V++ +++MY + G + A+ FD +
Sbjct: 523 VFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPD 582
Query: 316 LVSCETIVDVIVRDLNSDETLNHETE-HTTGIGACSFTYACLLSGAACIGTIGKGEQIHA 374
V+ T++ + + + + ++ G+ FT A L ++C+ + +G QIHA
Sbjct: 583 DVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHA 642
Query: 375 LVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATK 434
+K + + +L+ MY+KCG+ + A +F + N+ W +++ G A+HG +
Sbjct: 643 NALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKE 702
Query: 435 ALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMV 494
L+LF +M G+KP+ VT+I VLSACSH GL+ E +KH SM +G+ P +EHY+C+
Sbjct: 703 TLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLA 762
Query: 495 DVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPA 554
D LGR+GL+ +A I SM ++A A ++R+LL +CRV G+TE G+ A +LE EP D +
Sbjct: 763 DALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSS 822
Query: 555 TYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQK 614
Y+LLSN+YA +W ++ R MK K+ K+ G+SWIEV+N++H F V D S+ Q +
Sbjct: 823 AYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTEL 882
Query: 615 IYDELDELASKIKKLGYVPNTDFVLHDVEDEQKEQYLFQHSEKIAVAFALISIPNPKPIR 674
IY ++ ++ IK+ GYVP TDF L DVE+E+KE+ L+ HSEK+AVAF L+S P PIR
Sbjct: 883 IYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIR 942
Query: 675 IFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGTCSCNDYW 722
+ KNLRVCGDCH A+KYI+KV R IV+RDANRFH KDG CSC DYW
Sbjct: 943 VIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 116/430 (26%), Positives = 224/430 (52%), Gaps = 17/430 (3%)
Query: 110 VVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHS 169
++ N ++ + G + F M+ S D+ T L +++ L++G+Q+H
Sbjct: 280 IIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHC 339
Query: 170 WVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSG 229
++ GL L L V SL++MY K G +R VF++M E +++SW ++IAG + +G
Sbjct: 340 MALKLGLDLMLTVSNSLINMYCKLRKFGF---ARTVFDNMSERDLISWNSVIAG-IAQNG 395
Query: 230 QEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPD-FGFGEQLHSQTIKLGLSAVNCVA 288
E EA+ LF +L+ + P+ +T +SVLKA ++LP+ +Q+H IK+ + + V+
Sbjct: 396 LEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVS 455
Query: 289 NSLINMYARSGRLECARKCFDLLFEK---SLVSCETIVDVIVRDLNSDETLN-HETEHTT 344
+LI+ Y+R+ C ++ ++LFE+ LV+ ++ + + +TL H
Sbjct: 456 TALIDAYSRN---RCMKEA-EILFERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQ 511
Query: 345 GIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAA 404
G + FT A + + I +G+Q+HA +KSG++ +L +++ ++ MY KCG+ AA
Sbjct: 512 GERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAA 571
Query: 405 LQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHV 464
F+ + + + WT++ISG ++G +A +F +M GV P++ T + A S +
Sbjct: 572 QFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCL 631
Query: 465 GLIDEGWK-HFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWR 523
+++G + H N+++ P V +VD+ + G + +A + + + W
Sbjct: 632 TALEQGRQIHANALKLNCTNDPFVG--TSLVDMYAKCGSIDDAYCLFKRIEM-MNITAWN 688
Query: 524 SLLGSCRVHG 533
++L HG
Sbjct: 689 AMLVGLAQHG 698
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/371 (29%), Positives = 191/371 (51%), Gaps = 13/371 (3%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSN-SLYFSVG 61
S+RDL+SW S+++ A N +E EA+ F+ +L G P++Y T+ L+A S+ S+
Sbjct: 377 SERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLS 436
Query: 62 RVVFGSVLKTGYF-DSHVSVGCELIDMFVKG-CGDIESAHRVFEKMQERNVVTWNLMMTR 119
+ V +K DS VS LID + + C ++ A +FE+ ++V WN MM
Sbjct: 437 KQVHVHAIKINNVSDSFVSTA--LIDAYSRNRC--MKEAEILFER-HNFDLVAWNAMMAG 491
Query: 120 FAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALD 179
+ Q ++ LF M G D FTL + C L ++ GKQ+H++ I+SG LD
Sbjct: 492 YTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLD 551
Query: 180 LCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFC 239
L V ++DMY KC G + ++ F+S+P + V+WT +I+G + +G+E+ A +F
Sbjct: 552 LWVSSGILDMYVKC---GDMSAAQFAFDSIPVPDDVAWTTMISGCIE-NGEEERAFHVFS 607
Query: 240 DMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSG 299
M V P+ FT +++ KA + L G Q+H+ +KL + V SL++MYA+ G
Sbjct: 608 QMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCG 667
Query: 300 RLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLS 358
++ A F + ++ + ++ + + ETL + + GI T+ +LS
Sbjct: 668 SIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLS 727
Query: 359 GAACIGTIGKG 369
+ G + +
Sbjct: 728 ACSHSGLVSEA 738
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/387 (27%), Positives = 187/387 (48%), Gaps = 43/387 (11%)
Query: 84 LIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGY-PEDSID---LFFRMLLS 139
LI M+ K CG + A RVF+KM +R++V+WN ++ +AQ ++I L FR+L
Sbjct: 80 LISMYSK-CGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQ 138
Query: 140 G--YTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDG 197
YT R TL+ L C + + H + + GL D V +LV++Y K G
Sbjct: 139 DVVYTS-RMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKF---G 194
Query: 198 SLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVL 257
+ + + +F MP +VV W ++ Y+ G ++EA+ L + PN T +
Sbjct: 195 KVKEGKVLFEEMPYRDVVLWNLMLKAYLE-MGFKEEAIDLSSAFHSSGLNPNEITLRLLA 253
Query: 258 KACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLV 317
+ + D G + + +S + N ++ Y SG+ KCF
Sbjct: 254 RISGDDSDAGQVKSFANGNDASSVSEI-IFRNKGLSEYLHSGQYSALLKCF--------- 303
Query: 318 SCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVV 377
D++ D+ D+ T+ +L+ A + ++ G+Q+H + +
Sbjct: 304 -----ADMVESDVECDQV----------------TFILMLATAVKVDSLALGQQVHCMAL 342
Query: 378 KSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALE 437
K G + L+++N+LI+MY K A VF++M +R++I+W S+I+G A++G +A+
Sbjct: 343 KLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVC 402
Query: 438 LFYEMLETGVKPNDVTYIAVLSACSHV 464
LF ++L G+KP+ T +VL A S +
Sbjct: 403 LFMQLLRCGLKPDQYTMTSVLKAASSL 429
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 131/550 (23%), Positives = 250/550 (45%), Gaps = 62/550 (11%)
Query: 5 RDLVSWCSMMSCFANNS---ME--HEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFS 59
RDLVSW S+++ +A +S +E +A + F + + Y + + L+ C +S Y
Sbjct: 103 RDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVW 162
Query: 60 VGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTR 119
G K G D V L+++++K G ++ +FE+M R+VV WNLM+
Sbjct: 163 ASESFHGYACKIG-LDGDEFVAGALVNIYLK-FGKVKEGKVLFEEMPYRDVVLWNLMLKA 220
Query: 120 FAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALD 179
+ +MG+ E++IDL SG P+ TL
Sbjct: 221 YLEMGFKEEAIDLSSAFHSSGLNPNEITLR------------------------------ 250
Query: 180 LCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTAL----IAGYVRGSGQEQEAM 235
+ A+ + D S + F + + + VS ++ Y+ SGQ +
Sbjct: 251 ---------LLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLH-SGQYSALL 300
Query: 236 RLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMY 295
+ F DM++ +V + TF +L + G+Q+H +KLGL + V+NSLINMY
Sbjct: 301 KCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMY 360
Query: 296 ARSGRLECARKCFDLLFEKSLVSCETIVDVIVRD-LNSDETLNHETEHTTGIGACSFTYA 354
+ + AR FD + E+ L+S +++ I ++ L + G+ +T
Sbjct: 361 CKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMT 420
Query: 355 CLLSGAACIGT-IGKGEQIHALVVKSGFETNLSINNALISMYS--KCGNKEAALQVFNDM 411
+L A+ + + +Q+H +K ++ ++ ALI YS +C KEA ++ +
Sbjct: 421 SVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRC-MKEA--EILFER 477
Query: 412 GDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGW 471
+ +++ W ++++G+ + K L+LF M + G + +D T V C + I++G
Sbjct: 478 HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGK 537
Query: 472 K-HFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCR 530
+ H +++ + + V + ++D+ + G +S A +S+P+ D + W +++ C
Sbjct: 538 QVHAYAIKSGYDLDLWVS--SGILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTMISGCI 594
Query: 531 VHGNTELGEH 540
+G E H
Sbjct: 595 ENGEEERAFH 604
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 112/243 (46%), Gaps = 21/243 (8%)
Query: 185 SLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSG----QEQEAMRLFCD 240
+L+ MY+KC GSL +RRVF+ MP+ ++VSW +++A Y + S Q+A LF
Sbjct: 79 NLISMYSKC---GSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRI 135
Query: 241 MLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGR 300
+ Q V + T S +LK C + E H K+GL VA +L+N+Y + G+
Sbjct: 136 LRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGK 195
Query: 301 LECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETE-HTTGIGACSFTYACLL-- 357
++ + F+ + + +V ++ + +E ++ + H++G+ T L
Sbjct: 196 VKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARI 255
Query: 358 ----SGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGD 413
S A + + G ++ + + N +S Y G A L+ F DM +
Sbjct: 256 SGDDSDAGQVKSFANGNDASSV-------SEIIFRNKGLSEYLHSGQYSALLKCFADMVE 308
Query: 414 RNV 416
+V
Sbjct: 309 SDV 311
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 94/200 (47%), Gaps = 16/200 (8%)
Query: 265 DFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIV- 323
D G+ H++ + + + N+LI+MY++ G L AR+ FD + ++ LVS +I+
Sbjct: 54 DLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILA 113
Query: 324 ------DVIVRDLNSD----ETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIH 373
+ +V ++ L + +T+ + CL SG + E H
Sbjct: 114 AYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSG-----YVWASESFH 168
Query: 374 ALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYAT 433
K G + + + AL+++Y K G + +F +M R+V+ W ++ + + G+
Sbjct: 169 GYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKE 228
Query: 434 KALELFYEMLETGVKPNDVT 453
+A++L +G+ PN++T
Sbjct: 229 EAIDLSSAFHSSGLNPNEIT 248
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 499 bits (1285), Expect = e-141, Method: Compositional matrix adjust.
Identities = 278/721 (38%), Positives = 427/721 (59%), Gaps = 11/721 (1%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
RDLVSW S++S ++++ EAL + ++ P+ + ++ L A N L G+ +
Sbjct: 170 RDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGL 229
Query: 65 FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG 124
G LK+G S V V L+ M++K + A RVF++M R+ V++N M+ + ++
Sbjct: 230 HGFALKSGVN-SVVVVNNGLVAMYLKFRRPTD-ARRVFDEMDVRDSVSYNTMICGYLKLE 287
Query: 125 YPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGC 184
E+S+ +F L + PD T++S L AC L LS+ K ++++++++G L+ V
Sbjct: 288 MVEESVRMFLENL-DQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRN 346
Query: 185 SLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQG 244
L+D+YAKC G ++ +R VFNSM + VSW ++I+GY++ SG EAM+LF M+
Sbjct: 347 ILIDVYAKC---GDMITARDVFNSMECKDTVSWNSIISGYIQ-SGDLMEAMKLFKMMMIM 402
Query: 245 NVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECA 304
+ T+ ++ L D FG+ LHS IK G+ V+N+LI+MYA+ G + +
Sbjct: 403 EEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDS 462
Query: 305 RKCFDLLFEKSLVSCETIVDVIVR--DLNSDETLNHETEHTTGIGACSFTYACLLSGAAC 362
K F + V+ T++ VR D + + + + + + T+ L A
Sbjct: 463 LKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMA-TFLVTLPMCAS 521
Query: 363 IGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSI 422
+ G++IH +++ G+E+ L I NALI MYSKCG E + +VF M R+V+TWT +
Sbjct: 522 LAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGM 581
Query: 423 ISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHG 482
I + +G KALE F +M ++G+ P+ V +IA++ ACSH GL+DEG F M+ +
Sbjct: 582 IYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYK 641
Query: 483 VVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAA 542
+ P +EHYAC+VD+L RS +S+A EFI +MP+ DA +W S+L +CR G+ E E +
Sbjct: 642 IDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVS 701
Query: 543 KMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKF 602
+ I+E P DP IL SN YA +W V+ IRK++K K I K GYSWIEV VH F
Sbjct: 702 RRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVF 761
Query: 603 HVGDTSHPQAQKIYDELDELASKIKKLGYVPNTDFVLHDVEDEQKEQYLF-QHSEKIAVA 661
GD S PQ++ IY L+ L S + K GY+P+ V ++E+E++++ L HSE++A+A
Sbjct: 762 SSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIA 821
Query: 662 FALISIPNPKPIRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGTCSCNDY 721
F L++ P+++ KNLRVCGDCH K ISK+ GR I+VRDANRFH KDGTCSC D
Sbjct: 822 FGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDR 881
Query: 722 W 722
W
Sbjct: 882 W 882
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 153/567 (26%), Positives = 292/567 (51%), Gaps = 23/567 (4%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
+++ W S++ F+ N + EAL + + E P++Y F + ++AC+ +G +V
Sbjct: 69 KNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLV 128
Query: 65 FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG 124
+ +L G F+S + VG L+DM+ + G + A +VF++M R++V+WN +++ ++ G
Sbjct: 129 YEQILDMG-FESDLFVGNALVDMYSR-MGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 125 YPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGC 184
Y E++++++ + S PD FT++S L A L ++ G+ LH + ++SG+ + V
Sbjct: 187 YYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNN 246
Query: 185 SLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQG 244
LV MY K D+RRVF+ M + VS+ +I GY++ E E++R+F + L
Sbjct: 247 GLVAMYLKFR---RPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVE-ESVRMFLENLD- 301
Query: 245 NVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECA 304
P+ T SSVL+AC +L D + +++ +K G + V N LI++YA+ G + A
Sbjct: 302 QFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITA 361
Query: 305 RKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGAACI 363
R F+ + K VS +I+ ++ + E + + A TY L+S + +
Sbjct: 362 RDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRL 421
Query: 364 GTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSII 423
+ G+ +H+ +KSG +LS++NALI MY+KCG +L++F+ MG + +TW ++I
Sbjct: 422 ADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVI 481
Query: 424 SGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHC--- 480
S + G L++ +M ++ V P+ T++ L C+ + K HC
Sbjct: 482 SACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAA-----KRLGKEIHCCLL 536
Query: 481 -HGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGE 539
G ++ ++++ + G L + M D + W ++ + ++G GE
Sbjct: 537 RFGYESELQIGNALIEMYSKCGCLENSSRVFERMS-RRDVVTWTGMIYAYGMYGE---GE 592
Query: 540 HAAKMI--LEREPHDPATYILLSNLYA 564
A + +E+ P + + ++ +YA
Sbjct: 593 KALETFADMEKSGIVPDSVVFIAIIYA 619
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 115/219 (52%), Gaps = 5/219 (2%)
Query: 254 SSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFE 313
S L + +NL + ++H+ I LGL + + + LI+ Y+ + F +
Sbjct: 11 SRALSSSSNLNEL---RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP 67
Query: 314 -KSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQ 371
K++ +I+ ++ E L + + + +T+ ++ A + G+
Sbjct: 68 AKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDL 127
Query: 372 IHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGY 431
++ ++ GFE++L + NAL+ MYS+ G A QVF++M R++++W S+ISG++ HGY
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGY 187
Query: 432 ATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEG 470
+ALE+++E+ + + P+ T +VL A ++ ++ +G
Sbjct: 188 YEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQG 226
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 494 bits (1271), Expect = e-139, Method: Compositional matrix adjust.
Identities = 252/715 (35%), Positives = 431/715 (60%), Gaps = 8/715 (1%)
Query: 10 WCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVL 69
W +M+ A + ++ F M+ G + Y F+ ++ S+ G + G +L
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL 222
Query: 70 KTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDS 129
K+G F SVG L+ ++K ++SA +VF++M ER+V++WN ++ + G E
Sbjct: 223 KSG-FGERNSVGNSLVAFYLKN-QRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKG 280
Query: 130 IDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDM 189
+ +F +ML+SG D T+ S CA+ L+S+G+ +HS +++ + + +L+DM
Sbjct: 281 LSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDM 340
Query: 190 YAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPN 249
Y+KC G L ++ VF M + +VVS+T++IAGY R G EA++LF +M + ++P+
Sbjct: 341 YSKC---GDLDSAKAVFREMSDRSVVSYTSMIAGYAR-EGLAGEAVKLFEEMEEEGISPD 396
Query: 250 GFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFD 309
+T ++VL CA G+++H + L V+N+L++MYA+ G ++ A F
Sbjct: 397 VYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFS 456
Query: 310 LLFEKSLVSCETIVDVIVRDLNSDETLN--HETEHTTGIGACSFTYACLLSGAACIGTIG 367
+ K ++S TI+ ++ ++E L+ + T AC+L A +
Sbjct: 457 EMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFD 516
Query: 368 KGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFA 427
KG +IH ++++G+ ++ + N+L+ MY+KCG A +F+D+ +++++WT +I+G+
Sbjct: 517 KGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYG 576
Query: 428 KHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRV 487
HG+ +A+ LF +M + G++ ++++++++L ACSH GL+DEGW+ FN MRH + P V
Sbjct: 577 MHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTV 636
Query: 488 EHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILE 547
EHYAC+VD+L R+G L +A FI +MP+ DA +W +LL CR+H + +L E A+ + E
Sbjct: 637 EHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFE 696
Query: 548 REPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDT 607
EP + Y+L++N+YA E+W V +RK + Q+ + K G SWIE++ +V+ F GD+
Sbjct: 697 LEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDS 756
Query: 608 SHPQAQKIYDELDELASKIKKLGYVPNTDFVLHDVEDEQKEQYLFQHSEKIAVAFALISI 667
S+P+ + I L ++ +++ + GY P T + L D E+ +KE+ L HSEK+A+A +IS
Sbjct: 757 SNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISS 816
Query: 668 PNPKPIRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGTCSCNDYW 722
+ K IR+ KNLRVCGDCH K++SK+T R IV+RD+NRFH KDG CSC +W
Sbjct: 817 GHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 145/504 (28%), Positives = 261/504 (51%), Gaps = 28/504 (5%)
Query: 40 PNEYCFTAALRACSNSLYFSVGRVVFGSVLKTGY-FDSHVSVGCELIDMFVKGCGDIESA 98
P C + L+ C++S G+ V + G+ DS++ G +L M+ CGD++ A
Sbjct: 94 PRTLC--SVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNL--GSKLSLMYTN-CGDLKEA 148
Query: 99 HRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAEL 158
RVF++++ + WN++M A+ G SI LF +M+ SG D +T + + + L
Sbjct: 149 SRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSL 208
Query: 159 ELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDS-RRVFNSMPEHNVVSW 217
+ G+QLH ++++SG VG SLV Y K VDS R+VF+ M E +V+SW
Sbjct: 209 RSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLK----NQRVDSARKVFDEMTERDVISW 264
Query: 218 TALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTI 277
++I GYV +G ++ + +F ML + + T SV CA+ G +HS +
Sbjct: 265 NSIINGYV-SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGV 323
Query: 278 KLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN 337
K S + N+L++MY++ G L+ A+ F + ++S+VS +++ R+ + E +
Sbjct: 324 KACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVK 383
Query: 338 -HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYS 396
E GI +T +L+ A + +G+++H + ++ ++ ++NAL+ MY+
Sbjct: 384 LFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYA 443
Query: 397 KCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETG-VKPNDVTYI 455
KCG+ + A VF++M +++I+W +II G++K+ YA +AL LF +LE P++ T
Sbjct: 444 KCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVA 503
Query: 456 AVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYA------CMVDVLGRSGLLSEAIEF 509
VL AC+ + D+G R HG + R +++ +VD+ + G L A
Sbjct: 504 CVLPACASLSAFDKG-------REIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHML 556
Query: 510 INSMPLDADAMVWRSLLGSCRVHG 533
+ + D + W ++ +HG
Sbjct: 557 FDDIA-SKDLVSWTVMIAGYGMHG 579
Score = 191 bits (485), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 133/428 (31%), Positives = 227/428 (53%), Gaps = 21/428 (4%)
Query: 107 ERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSG-YTPDRFTLTSALTACAELELLSVGK 165
+R+V N + RF + G E+++ L + +SG + D TL S L CA+ + L GK
Sbjct: 58 DRSVTDANTQLRRFCESGNLENAVKL---LCVSGKWDIDPRTLCSVLQLCADSKSLKDGK 114
Query: 166 QLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYV 225
++ +++ +G +D +G L MY C G L ++ RVF+ + + W L+
Sbjct: 115 EVDNFIRGNGFVIDSNLGSKLSLMYTNC---GDLKEASRVFDEVKIEKALFWNILMNELA 171
Query: 226 RGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVN 285
+ SG ++ LF M+ V + +TFS V K+ ++L GEQLH +K G N
Sbjct: 172 K-SGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERN 230
Query: 286 CVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEH-TT 344
V NSL+ Y ++ R++ ARK FD + E+ ++S +I++ V + +++ L+ + +
Sbjct: 231 SVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVS 290
Query: 345 GIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAA 404
GI T + +G A I G +H++ VK+ F N L+ MYSKCG+ ++A
Sbjct: 291 GIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSA 350
Query: 405 LQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHV 464
VF +M DR+V+++TS+I+G+A+ G A +A++LF EM E G+ P+ T AVL+ C+
Sbjct: 351 KAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARY 410
Query: 465 GLIDEG-----WKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADA 519
L+DEG W N + G V + ++D+ + G + EA E + S D
Sbjct: 411 RLLDEGKRVHEWIKENDL----GFDIFVSN--ALMDMYAKCGSMQEA-ELVFSEMRVKDI 463
Query: 520 MVWRSLLG 527
+ W +++G
Sbjct: 464 ISWNTIIG 471
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 137/505 (27%), Positives = 245/505 (48%), Gaps = 22/505 (4%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR 62
++RD++SW S+++ + +N + + L F+ ML G + + C++S S+GR
Sbjct: 257 TERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGR 316
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
V S+ F L+DM+ K CGD++SA VF +M +R+VV++ M+ +A+
Sbjct: 317 AVH-SIGVKACFSREDRFCNTLLDMYSK-CGDLDSAKAVFREMSDRSVVSYTSMIAGYAR 374
Query: 123 MGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCV 182
G +++ LF M G +PD +T+T+ L CA LL GK++H W+ + L D+ V
Sbjct: 375 EGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFV 434
Query: 183 GCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDML 242
+L+DMYAKC GS+ ++ VF+ M +++SW +I GY + EA+ LF +L
Sbjct: 435 SNALMDMYAKC---GSMQEAELVFSEMRVKDIISWNTIIGGYSKNC-YANEALSLFNLLL 490
Query: 243 -QGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRL 301
+ +P+ T + VL ACA+L F G ++H ++ G + VANSL++MYA+ G L
Sbjct: 491 EEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGAL 550
Query: 302 ECARKCFDLLFEKSLVSCET-IVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGA 360
A FD + K LVS I + + GI A ++ LL
Sbjct: 551 LLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYAC 610
Query: 361 ACIGTIGKGEQIHALVV-KSGFETNLSINNALISMYSKCGNKEAALQVFNDMG-DRNVIT 418
+ G + +G + ++ + E + ++ M ++ G+ A + +M +
Sbjct: 611 SHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATI 670
Query: 419 WTSIISGFAKH---GYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFN 475
W +++ G H A K E +E+ +P + Y ++ +++ E W+
Sbjct: 671 WGALLCGCRIHHDVKLAEKVAEKVFEL-----EPENTGYYVLM---ANIYAEAEKWEQVK 722
Query: 476 SMRHCHGVVPRVEHYAC-MVDVLGR 499
+R G ++ C +++ GR
Sbjct: 723 RLRKRIGQRGLRKNPGCSWIEIKGR 747
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 493 bits (1268), Expect = e-139, Method: Compositional matrix adjust.
Identities = 268/715 (37%), Positives = 415/715 (58%), Gaps = 10/715 (1%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR 62
S+RD +SW S+ + +A N E+ F M N + L + + GR
Sbjct: 205 SERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGR 264
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
+ G V+K G FDS V V L+ M+ G G A+ VF++M +++++WN +M F
Sbjct: 265 GIHGLVVKMG-FDSVVCVCNTLLRMYA-GAGRSVEANLVFKQMPTKDLISWNSLMASFVN 322
Query: 123 MGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCV 182
G D++ L M+ SG + + T TSAL AC + G+ LH V+ SGL + +
Sbjct: 323 DGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQII 382
Query: 183 GCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDML 242
G +LV MY K G + +SRRV MP +VV+W ALI GY ++ A+ F M
Sbjct: 383 GNALVSMYGKI---GEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDK-ALAAFQTMR 438
Query: 243 QGNVAPNGFTFSSVLKACANLPD--FGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGR 300
V+ N T SVL AC LP G+ LH+ + G + V NSLI MYA+ G
Sbjct: 439 VEGVSSNYITVVSVLSACL-LPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGD 497
Query: 301 LECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETE-HTTGIGACSFTYACLLSG 359
L ++ F+ L +++++ ++ + +E L ++ + G+ F+++ LS
Sbjct: 498 LSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSA 557
Query: 360 AACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITW 419
AA + + +G+Q+H L VK GFE + I NA MYSKCG +++ +R++ +W
Sbjct: 558 AAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSW 617
Query: 420 TSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRH 479
+IS +HGY + F+EMLE G+KP VT++++L+ACSH GL+D+G +++ +
Sbjct: 618 NILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIAR 677
Query: 480 CHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGE 539
G+ P +EH C++D+LGRSG L+EA FI+ MP+ + +VWRSLL SC++HGN + G
Sbjct: 678 DFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGR 737
Query: 540 HAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQV 599
AA+ + + EP D + Y+L SN++AT RW DV +RK M K I K+ SW++++++V
Sbjct: 738 KAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKV 797
Query: 600 HKFHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTDFVLHDVEDEQKEQYLFQHSEKIA 659
F +GD +HPQ +IY +L+++ IK+ GYV +T L D ++EQKE L+ HSE++A
Sbjct: 798 SSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLA 857
Query: 660 VAFALISIPNPKPIRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHIKDG 714
+A+AL+S P +RIFKNLR+C DCH+ K++S+V GR IV+RD RFHH + G
Sbjct: 858 LAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERG 912
Score = 213 bits (542), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 155/543 (28%), Positives = 265/543 (48%), Gaps = 12/543 (2%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNS-LYFSVGRV 63
R+ VSW +MMS + E + F M + G P+ + + + AC S F G
Sbjct: 4 RNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQ 63
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
V G V K+G S V V ++ ++ G + + +VFE+M +RNVV+W +M ++
Sbjct: 64 VHGFVAKSGLL-SDVYVSTAILHLY-GVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDK 121
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVG 183
G PE+ ID++ M G + +++ +++C L+ S+G+Q+ V++SGL L V
Sbjct: 122 GEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVE 181
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQ 243
SL+ M G++ + +F+ M E + +SW ++ A Y + +G +E+ R+F M +
Sbjct: 182 NSLISMLGSM---GNVDYANYIFDQMSERDTISWNSIAAAYAQ-NGHIEESFRIFSLMRR 237
Query: 244 GNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLEC 303
+ N T S++L ++ +G +H +K+G +V CV N+L+ MYA +GR
Sbjct: 238 FHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVE 297
Query: 304 ARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEH-TTGIGACSFTYACLLSGAAC 362
A F + K L+S +++ V D S + L ++G T+ L+
Sbjct: 298 ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFT 357
Query: 363 IGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSI 422
KG +H LVV SG N I NAL+SMY K G + +V M R+V+ W ++
Sbjct: 358 PDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNAL 417
Query: 423 ISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHG 482
I G+A+ KAL F M GV N +T ++VLSAC G + E K ++ G
Sbjct: 418 IGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAG 477
Query: 483 VVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAA 542
++ + + G LS + + N + + + + W ++L + HG+ GE
Sbjct: 478 FESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHHGH---GEEVL 533
Query: 543 KMI 545
K++
Sbjct: 534 KLV 536
Score = 188 bits (478), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 131/438 (29%), Positives = 215/438 (49%), Gaps = 34/438 (7%)
Query: 105 MQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAEL-ELLSV 163
M RN V+WN MM+ ++G + ++ F +M G P F + S +TAC +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 164 GKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAG 223
G Q+H +V +SGL D+ V +++ +Y V G + SR+VF MP+ NVVSWT+L+ G
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLY---GVYGLVSCSRKVFEEMPDRNVVSWTSLMVG 117
Query: 224 YVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSA 283
Y G+ +E + ++ M V N + S V+ +C L D G Q+ Q +K GL +
Sbjct: 118 Y-SDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLES 176
Query: 284 VNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN------ 337
V NSLI+M G ++ A FD + E+ +S +I ++ + +E+
Sbjct: 177 KLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMR 236
Query: 338 --HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMY 395
H+ ++T T + LLS + G IH LVVK GF++ + + N L+ MY
Sbjct: 237 RFHDEVNST-------TVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMY 289
Query: 396 SKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYI 455
+ G A VF M +++I+W S+++ F G + AL L M+ +G N VT+
Sbjct: 290 AGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFT 349
Query: 456 AVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHY------ACMVDVLGRSGLLSEAIEF 509
+ L+AC ++G R HG+V + +V + G+ G +SE+
Sbjct: 350 SALAACFTPDFFEKG-------RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRV 402
Query: 510 INSMPLDADAMVWRSLLG 527
+ MP D + W +L+G
Sbjct: 403 LLQMP-RRDVVAWNALIG 419
Score = 126 bits (316), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 159/328 (48%), Gaps = 17/328 (5%)
Query: 209 MPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPD-FG 267
MP N VSW +++G VR G E M F M + P+ F +S++ AC F
Sbjct: 1 MPVRNEVSWNTMMSGIVR-VGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFR 59
Query: 268 FGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIV 327
G Q+H K GL + V+ +++++Y G + C+RK F+ + ++++VS +++
Sbjct: 60 EGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYS 119
Query: 328 RDLNSDETLN-HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLS 386
+E ++ ++ G+G + + ++S + G QI VVKSG E+ L+
Sbjct: 120 DKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLA 179
Query: 387 INNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETG 446
+ N+LISM GN + A +F+ M +R+ I+W SI + +A++G+ ++ +F M
Sbjct: 180 VENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFH 239
Query: 447 VKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRV--EHYACMVDVLGR----S 500
+ N T +LS HV H R HG+V ++ + C+ + L R +
Sbjct: 240 DEVNSTTVSTLLSVLGHV-------DHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGA 292
Query: 501 GLLSEAIEFINSMPLDADAMVWRSLLGS 528
G EA MP D + W SL+ S
Sbjct: 293 GRSVEANLVFKQMP-TKDLISWNSLMAS 319
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 491 bits (1265), Expect = e-139, Method: Compositional matrix adjust.
Identities = 263/746 (35%), Positives = 436/746 (58%), Gaps = 42/746 (5%)
Query: 12 SMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVLKT 71
S++ +A++ + +EA++ FL M+ G P++Y F L AC+ S G + G ++K
Sbjct: 104 SLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKM 163
Query: 72 GYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSID 131
GY + V L+ + + CG+++SA +VF++M ERNVV+W M+ +A+ + +D++D
Sbjct: 164 GY-AKDLFVQNSLVHFYAE-CGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 132 LFFRMLLSG-YTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMY 190
LFFRM+ TP+ T+ ++ACA+LE L G+++++++ SG+ ++ + +LVDMY
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 191 AKC-AVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPN 249
KC A+D + +R+F+ N+ A+ + YVR G +EA+ +F M+ V P+
Sbjct: 282 MKCNAIDVA----KRLFDEYGASNLDLCNAMASNYVR-QGLTREALGVFNLMMDSGVRPD 336
Query: 250 GFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFD 309
+ S + +C+ L + +G+ H ++ G + + + N+LI+MY + R + A + FD
Sbjct: 337 RISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFD 396
Query: 310 LLFEKSLVSCETIVDVIVRDLNSD------ETLNHET----------------------- 340
+ K++V+ +IV V + D ET+ +
Sbjct: 397 RMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEV 456
Query: 341 ----EHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYS 396
+ G+ A T + S +G + + I+ + K+G + ++ + L+ M+S
Sbjct: 457 FCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFS 516
Query: 397 KCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIA 456
+CG+ E+A+ +FN + +R+V WT+ I A G A +A+ELF +M+E G+KP+ V ++
Sbjct: 517 RCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVG 576
Query: 457 VLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLD 516
L+ACSH GL+ +G + F SM HGV P HY CMVD+LGR+GLL EA++ I MP++
Sbjct: 577 ALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPME 636
Query: 517 ADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIR 576
+ ++W SLL +CRV GN E+ +AA+ I P +Y+LLSN+YA+ RW D+A +R
Sbjct: 637 PNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVR 696
Query: 577 KTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTD 636
+MK+K + K G S I++ + H+F GD SHP+ I LDE++ + LG+VP+
Sbjct: 697 LSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLS 756
Query: 637 FVLHDVEDEQKEQYLFQHSEKIAVAFALISIPNPKPIRIFKNLRVCGDCHTAIKYISKVT 696
VL DV++++K L +HSEK+A+A+ LIS IRI KNLRVC DCH+ K+ SKV
Sbjct: 757 NVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVY 816
Query: 697 GRVIVVRDANRFHHIKDGTCSCNDYW 722
R I++RD NRFH+I+ G CSC D+W
Sbjct: 817 NREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 199 bits (505), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 147/497 (29%), Positives = 241/497 (48%), Gaps = 52/497 (10%)
Query: 67 SVLKTGYFDSHVSVGCELIDMFVKGC--GDIES---AHRVFEKMQERNV-VTWNLMMTRF 120
S+ K G D+ VS +L+ + C G ES A VFE + +N ++ +
Sbjct: 54 SLTKQG-LDNDVSTITKLV---ARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGY 109
Query: 121 AQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDL 180
A G ++I LF RM+ SG +PD++T L+ACA+ G Q+H +++ G A DL
Sbjct: 110 ASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDL 169
Query: 181 CVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCD 240
V SLV YA+C G L +R+VF+ M E NVVSWT++I GY R ++A+ LF
Sbjct: 170 FVQNSLVHFYAEC---GELDSARKVFDEMSERNVVSWTSMICGYAR-RDFAKDAVDLFFR 225
Query: 241 MLQG-NVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSG 299
M++ V PN T V+ ACA L D GE++++ G+ + + ++L++MY +
Sbjct: 226 MVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCN 285
Query: 300 RLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLS 358
++ A++ FD +L C + VR + E L +G+ + +S
Sbjct: 286 AIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAIS 345
Query: 359 GAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVIT 418
+ + I G+ H V+++GFE+ +I NALI MY KC ++ A ++F+ M ++ V+T
Sbjct: 346 SCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVT 405
Query: 419 WTSIISGFAKHGYATKALELFYEMLET--------------------------------G 446
W SI++G+ ++G A E F M E G
Sbjct: 406 WNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEG 465
Query: 447 VKPNDVTYIAVLSACSHVGLID-EGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSE 505
V + VT +++ SAC H+G +D W ++ + +G+ V +VD+ R G
Sbjct: 466 VNADGVTMMSIASACGHLGALDLAKWIYYYIEK--NGIQLDVRLGTTLVDMFSRCGDPES 523
Query: 506 AIEFINSMPLDADAMVW 522
A+ NS+ + D W
Sbjct: 524 AMSIFNSLT-NRDVSAW 539
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/461 (24%), Positives = 213/461 (46%), Gaps = 36/461 (7%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDML-EHGFYPNEYCFTAALRACSNSLYFSVG 61
S+R++VSW SM+ +A +A+ F M+ + PN + AC+ G
Sbjct: 196 SERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETG 255
Query: 62 RVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFA 121
V+ + +G + + V L+DM++K C I+ A R+F++ N+ N M + +
Sbjct: 256 EKVYAFIRNSGIEVNDLMVSA-LVDMYMK-CNAIDVAKRLFDEYGASNLDLCNAMASNYV 313
Query: 122 QMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLC 181
+ G +++ +F M+ SG PDR ++ SA+++C++L + GK H +V+R+G
Sbjct: 314 RQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDN 373
Query: 182 VGCSLVDMYAKC---------------------------AVDGSLVDSR-RVFNSMPEHN 213
+ +L+DMY KC V+ VD+ F +MPE N
Sbjct: 374 ICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKN 433
Query: 214 VVSWTALIAGYVRGSGQEQEAMRLFCDML-QGNVAPNGFTFSSVLKACANLPDFGFGEQL 272
+VSW +I+G V+GS E EA+ +FC M Q V +G T S+ AC +L + +
Sbjct: 434 IVSWNTIISGLVQGSLFE-EAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWI 492
Query: 273 HSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNS 332
+ K G+ + +L++M++R G E A F+ L + + + + + N+
Sbjct: 493 YYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNA 552
Query: 333 DETLN-HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQI-HALVVKSGFETNLSINNA 390
+ + + G+ + L+ + G + +G++I ++++ G
Sbjct: 553 ERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGC 612
Query: 391 LISMYSKCGNKEAALQVFNDMG-DRNVITWTSIISGFAKHG 430
++ + + G E A+Q+ DM + N + W S+++ G
Sbjct: 613 MVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQG 653
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 486 bits (1251), Expect = e-137, Method: Compositional matrix adjust.
Identities = 262/745 (35%), Positives = 435/745 (58%), Gaps = 42/745 (5%)
Query: 12 SMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVLKT 71
S++ +A++ + +EA++ FL M+ G P++Y F L AC+ S G + G ++K
Sbjct: 104 SLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKM 163
Query: 72 GYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSID 131
GY + V L+ + + CG+++SA +VF++M ERNVV+W M+ +A+ + +D++D
Sbjct: 164 GYA-KDLFVQNSLVHFYAE-CGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 132 LFFRMLLSG-YTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMY 190
LFFRM+ TP+ T+ ++ACA+LE L G+++++++ SG+ ++ + +LVDMY
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 191 AKC-AVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPN 249
KC A+D + +R+F+ N+ A+ + YVR G +EA+ +F M+ V P+
Sbjct: 282 MKCNAIDVA----KRLFDEYGASNLDLCNAMASNYVR-QGLTREALGVFNLMMDSGVRPD 336
Query: 250 GFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFD 309
+ S + +C+ L + +G+ H ++ G + + + N+LI+MY + R + A + FD
Sbjct: 337 RISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFD 396
Query: 310 LLFEKSLVSCETIVDVIVRDLNSD------ETLNHET----------------------- 340
+ K++V+ +IV V + D ET+ +
Sbjct: 397 RMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEV 456
Query: 341 ----EHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYS 396
+ G+ A T + S +G + + I+ + K+G + ++ + L+ M+S
Sbjct: 457 FCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFS 516
Query: 397 KCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIA 456
+CG+ E+A+ +FN + +R+V WT+ I A G A +A+ELF +M+E G+KP+ V ++
Sbjct: 517 RCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVG 576
Query: 457 VLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLD 516
L+ACSH GL+ +G + F SM HGV P HY CMVD+LGR+GLL EA++ I MP++
Sbjct: 577 ALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPME 636
Query: 517 ADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIR 576
+ ++W SLL +CRV GN E+ +AA+ I P +Y+LLSN+YA+ RW D+A +R
Sbjct: 637 PNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVR 696
Query: 577 KTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTD 636
+MK+K + K G S I++ + H+F GD SHP+ I LDE++ + LG+VP+
Sbjct: 697 LSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLS 756
Query: 637 FVLHDVEDEQKEQYLFQHSEKIAVAFALISIPNPKPIRIFKNLRVCGDCHTAIKYISKVT 696
VL DV++++K L +HSEK+A+A+ LIS IRI KNLRVC DCH+ K+ SKV
Sbjct: 757 NVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVY 816
Query: 697 GRVIVVRDANRFHHIKDGTCSCNDY 721
R I++RD NRFH+I+ G CSC D+
Sbjct: 817 NREIILRDNNRFHYIRQGKCSCGDF 841
Score = 198 bits (504), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 136/461 (29%), Positives = 225/461 (48%), Gaps = 43/461 (9%)
Query: 98 AHRVFEKMQERNV-VTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACA 156
A VFE + +N ++ +A G ++I LF RM+ SG +PD++T L+ACA
Sbjct: 86 AKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACA 145
Query: 157 ELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVS 216
+ G Q+H +++ G A DL V SLV YA+C G L +R+VF+ M E NVVS
Sbjct: 146 KSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAEC---GELDSARKVFDEMSERNVVS 202
Query: 217 WTALIAGYVRGSGQEQEAMRLFCDMLQG-NVAPNGFTFSSVLKACANLPDFGFGEQLHSQ 275
WT++I GY R ++A+ LF M++ V PN T V+ ACA L D GE++++
Sbjct: 203 WTSMICGYAR-RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAF 261
Query: 276 TIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDET 335
G+ + + ++L++MY + ++ A++ FD +L C + VR + E
Sbjct: 262 IRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREA 321
Query: 336 LN-HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISM 394
L +G+ + +S + + I G+ H V+++GFE+ +I NALI M
Sbjct: 322 LGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDM 381
Query: 395 YSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLET--------- 445
Y KC ++ A ++F+ M ++ V+TW SI++G+ ++G A E F M E
Sbjct: 382 YMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTII 441
Query: 446 -----------------------GVKPNDVTYIAVLSACSHVGLID-EGWKHFNSMRHCH 481
GV + VT +++ SAC H+G +D W ++ + +
Sbjct: 442 SGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEK--N 499
Query: 482 GVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVW 522
G+ V +VD+ R G A+ NS+ + D W
Sbjct: 500 GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLT-NRDVSAW 539
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 112/461 (24%), Positives = 213/461 (46%), Gaps = 36/461 (7%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDML-EHGFYPNEYCFTAALRACSNSLYFSVG 61
S+R++VSW SM+ +A +A+ F M+ + PN + AC+ G
Sbjct: 196 SERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETG 255
Query: 62 RVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFA 121
V+ + +G + + V L+DM++K C I+ A R+F++ N+ N M + +
Sbjct: 256 EKVYAFIRNSGIEVNDLMVSA-LVDMYMK-CNAIDVAKRLFDEYGASNLDLCNAMASNYV 313
Query: 122 QMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLC 181
+ G +++ +F M+ SG PDR ++ SA+++C++L + GK H +V+R+G
Sbjct: 314 RQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDN 373
Query: 182 VGCSLVDMYAKC---------------------------AVDGSLVDSR-RVFNSMPEHN 213
+ +L+DMY KC V+ VD+ F +MPE N
Sbjct: 374 ICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKN 433
Query: 214 VVSWTALIAGYVRGSGQEQEAMRLFCDML-QGNVAPNGFTFSSVLKACANLPDFGFGEQL 272
+VSW +I+G V+GS E EA+ +FC M Q V +G T S+ AC +L + +
Sbjct: 434 IVSWNTIISGLVQGSLFE-EAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWI 492
Query: 273 HSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNS 332
+ K G+ + +L++M++R G E A F+ L + + + + + N+
Sbjct: 493 YYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNA 552
Query: 333 DETLN-HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQI-HALVVKSGFETNLSINNA 390
+ + + G+ + L+ + G + +G++I ++++ G
Sbjct: 553 ERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGC 612
Query: 391 LISMYSKCGNKEAALQVFNDMG-DRNVITWTSIISGFAKHG 430
++ + + G E A+Q+ DM + N + W S+++ G
Sbjct: 613 MVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQG 653
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 480 bits (1235), Expect = e-135, Method: Compositional matrix adjust.
Identities = 258/722 (35%), Positives = 412/722 (57%), Gaps = 12/722 (1%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEH-GFYPNEYCFTAALRACSNSLYFSVGR 62
+ D+ + +M F+ N H +L F + + PN + A+ A S GR
Sbjct: 80 RPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGR 139
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
V+ G + G DS + +G ++ M+ K +E A +VF++M E++ + WN M++ + +
Sbjct: 140 VIHGQAVVDG-CDSELLLGSNIVKMYFK-FWRVEDARKVFDRMPEKDTILWNTMISGYRK 197
Query: 123 MGYPEDSIDLFFRMLLSGYTP-DRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLC 181
+SI +F ++ T D TL L A AEL+ L +G Q+HS ++G
Sbjct: 198 NEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDY 257
Query: 182 VGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDM 241
V + +Y+KC G + +F + ++V++ A+I GY +G+ + ++ LF ++
Sbjct: 258 VLTGFISLYSKC---GKIKMGSALFREFRKPDIVAYNAMIHGYT-SNGETELSLSLFKEL 313
Query: 242 LQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRL 301
+ T S++ +L +H +K + V+ +L +Y++ +
Sbjct: 314 MLSGARLRSSTLVSLVPVSGHLM---LIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEI 370
Query: 302 ECARKCFDLLFEKSLVSCETIVDVIVRD-LNSDETLNHETEHTTGIGACSFTYACLLSGA 360
E ARK FD EKSL S ++ ++ L D + T C+LS
Sbjct: 371 ESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSAC 430
Query: 361 ACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWT 420
A +G + G+ +H LV + FE+++ ++ ALI MY+KCG+ A ++F+ M +N +TW
Sbjct: 431 AQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWN 490
Query: 421 SIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHC 480
++ISG+ HG +AL +FYEML +G+ P VT++ VL ACSH GL+ EG + FNSM H
Sbjct: 491 TMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHR 550
Query: 481 HGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEH 540
+G P V+HYACMVD+LGR+G L A++FI +M ++ + VW +LLG+CR+H +T L
Sbjct: 551 YGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLART 610
Query: 541 AAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVH 600
++ + E +P + ++LLSN+++ + + A +R+T K++K+ K GY+ IE+ H
Sbjct: 611 VSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPH 670
Query: 601 KFHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTDFVLHDVEDEQKEQYLFQHSEKIAV 660
F GD SHPQ ++IY++L++L K+++ GY P T+ LHDVE+E++E + HSE++A+
Sbjct: 671 VFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAI 730
Query: 661 AFALISIPNPKPIRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGTCSCND 720
AF LI+ IRI KNLRVC DCHT K ISK+T RVIVVRDANRFHH KDG CSC D
Sbjct: 731 AFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGD 790
Query: 721 YW 722
YW
Sbjct: 791 YW 792
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 479 bits (1234), Expect = e-135, Method: Compositional matrix adjust.
Identities = 252/724 (34%), Positives = 420/724 (58%), Gaps = 12/724 (1%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHG--FYPNEYCFTAALRACSNSLYFSVGR 62
R +V+W +M +A NS EA F M P+ FT L C++++ +
Sbjct: 108 RTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVG 167
Query: 63 VVFGSVLKTGYFDSH--VSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRF 120
V +K G FD++ ++V L+ + + ++ A +FE++ E++ VT+N ++T +
Sbjct: 168 QVHAFAVKLG-FDTNPFLTVSNVLLKSYCE-VRRLDLACVLFEEIPEKDSVTFNTLITGY 225
Query: 121 AQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDL 180
+ G +SI LF +M SG+ P FT + L A L ++G+QLH+ + +G + D
Sbjct: 226 EKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDA 285
Query: 181 CVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCD 240
VG ++D Y+K ++++R +F+ MPE + VS+ +I+ Y + Q + ++ F +
Sbjct: 286 SVGNQILDFYSK---HDRVLETRMLFDEMPELDFVSYNVVISSYSQAD-QYEASLHFFRE 341
Query: 241 MLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGR 300
M F F+++L ANL G QLH Q + ++ V NSL++MYA+
Sbjct: 342 MQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEM 401
Query: 301 LECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETE-HTTGIGACSFTYACLLSG 359
E A F L +++ VS ++ V+ L T+ + + A T+A +L
Sbjct: 402 FEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKA 461
Query: 360 AACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITW 419
+A ++ G+Q+HA +++SG N+ + L+ MY+KCG+ + A+QVF +M DRN ++W
Sbjct: 462 SASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSW 521
Query: 420 TSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRH 479
++IS A +G A+ F +M+E+G++P+ V+ + VL+ACSH G +++G ++F +M
Sbjct: 522 NALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSP 581
Query: 480 CHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGE 539
+G+ P+ +HYACM+D+LGR+G +EA + ++ MP + D ++W S+L +CR+H N L E
Sbjct: 582 IYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAE 641
Query: 540 HAAKMILEREP-HDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQ 598
AA+ + E D A Y+ +SN+YA W V ++K M+++ I K YSW+EV ++
Sbjct: 642 RAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHK 701
Query: 599 VHKFHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTDFVLHDVEDEQKEQYLFQHSEKI 658
+H F D +HP +I +++EL ++I++ GY P+T V+ DV+++ K + L HSE++
Sbjct: 702 IHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERL 761
Query: 659 AVAFALISIPNPKPIRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGTCSC 718
AVAFALIS P PI + KNLR C DCH AIK ISK+ R I VRD +RFHH +G CSC
Sbjct: 762 AVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSC 821
Query: 719 NDYW 722
DYW
Sbjct: 822 GDYW 825
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 132/463 (28%), Positives = 233/463 (50%), Gaps = 20/463 (4%)
Query: 93 GDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSG--YTPDRFTLTS 150
GD+ SA +F+ M +R VVTW ++M +A+ + +++ LF +M S PD T T+
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 151 ALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRR------ 204
L C + + Q+H++ ++ G + + S V + + C V RR
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEV-------RRLDLACV 205
Query: 205 VFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLP 264
+F +PE + V++ LI GY + G E++ LF M Q P+ FTFS VLKA L
Sbjct: 206 LFEEIPEKDSVTFNTLITGYEK-DGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLH 264
Query: 265 DFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVD 324
DF G+QLH+ ++ G S V N +++ Y++ R+ R FD + E VS ++
Sbjct: 265 DFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVIS 324
Query: 325 VIVRDLNSDETLNHETE-HTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFET 383
+ + +L+ E G +F +A +LS AA + ++ G Q+H + + ++
Sbjct: 325 SYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADS 384
Query: 384 NLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEML 443
L + N+L+ MY+KC E A +F + R ++WT++ISG+ + G L+LF +M
Sbjct: 385 ILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMR 444
Query: 444 ETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLL 503
+ ++ + T+ VL A + + G K ++ G + V + +VD+ + G +
Sbjct: 445 GSNLRADQSTFATVLKASASFASLLLG-KQLHAFIIRSGNLENVFSGSGLVDMYAKCGSI 503
Query: 504 SEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHA-AKMI 545
+A++ MP D +A+ W +L+ + +G+ E A AKMI
Sbjct: 504 KDAVQVFEEMP-DRNAVSWNALISAHADNGDGEAAIGAFAKMI 545
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 104/188 (55%), Gaps = 13/188 (6%)
Query: 289 NSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGA 348
N++I+ + ++G + AR FD + ++++V+ ++ R+ + DE + +
Sbjct: 83 NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRS-SS 141
Query: 349 CSF----TYACLLSGAACIGTIGKGE--QIHALVVKSGFETN--LSINNALISMYSKCGN 400
C+ T+ LL G C + + Q+HA VK GF+TN L+++N L+ Y +
Sbjct: 142 CTLPDHVTFTTLLPG--CNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRR 199
Query: 401 KEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSA 460
+ A +F ++ +++ +T+ ++I+G+ K G T+++ LF +M ++G +P+D T+ VL A
Sbjct: 200 LDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Query: 461 CSHVGLID 468
VGL D
Sbjct: 260 V--VGLHD 265
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 57/107 (53%), Gaps = 4/107 (3%)
Query: 371 QIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHG 430
++ A ++K+GF+T+ +N ++ + G AA +V+++M +N ++ ++ISG K G
Sbjct: 34 RVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTG 93
Query: 431 YATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSM 477
+ A +LF M + V VT+ ++ + DE +K F M
Sbjct: 94 DVSSARDLFDAMPDRTV----VTWTILMGWYARNSHFDEAFKLFRQM 136
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 478 bits (1230), Expect = e-135, Method: Compositional matrix adjust.
Identities = 268/697 (38%), Positives = 413/697 (59%), Gaps = 24/697 (3%)
Query: 40 PNE-YCFTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESA 98
PN+ + LR C+ G V +LK+G + ++ LIDM+ K C + A
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSN-YLIDMYCK-CREPLMA 60
Query: 99 HRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAEL 158
++VF+ M ERNVV+W+ +M+ G + S+ LF M G P+ FT ++ L AC L
Sbjct: 61 YKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLL 120
Query: 159 ELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWT 218
L G Q+H + ++ G + + VG SLVDMY+KC G + ++ +VF + + +++SW
Sbjct: 121 NALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKC---GRINEAEKVFRRIVDRSLISWN 177
Query: 219 ALIAGYVRGSGQEQEAMRLFCDMLQGNVA--PNGFTFSSVLKACANLPDFGFGEQLHSQT 276
A+IAG+V +G +A+ F M + N+ P+ FT +S+LKAC++ G+Q+H
Sbjct: 178 AMIAGFVH-AGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFL 236
Query: 277 IKLGL--SAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDE 334
++ G + + SL+++Y + G L ARK FD + EK+++S +++ ++ E
Sbjct: 237 VRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVE 296
Query: 335 TL---NHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVK--SGFETNLSINN 389
+ E + I SF + ++ A + +G+Q+ AL VK SG ET S+ N
Sbjct: 297 AMGLFKRLQELNSQID--SFALSSIIGVFADFALLRQGKQMQALAVKLPSGLET--SVLN 352
Query: 390 ALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKP 449
+++ MY KCG + A + F +M ++VI+WT +I+G+ KHG K++ +FYEML ++P
Sbjct: 353 SVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEP 412
Query: 450 NDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEF 509
++V Y+AVLSACSH G+I EG + F+ + HG+ PRVEHYAC+VD+LGR+G L EA
Sbjct: 413 DEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHL 472
Query: 510 INSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERW 569
I++MP+ + +W++LL CRVHG+ ELG+ K++L + +PA Y+++SNLY W
Sbjct: 473 IDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYW 532
Query: 570 YDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELDELASKIK-K 628
+ R+ K + KEAG SW+E+E +VH F G+ SHP I + L E +++ +
Sbjct: 533 NEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREE 592
Query: 629 LGYVPNTDFVLHDVEDEQKEQYLFQHSEKIAVAFALIS---IPNPKPIRIFKNLRVCGDC 685
LGYV LHD++DE KE+ L HSEK+A+ AL + K IR+FKNLRVC DC
Sbjct: 593 LGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDC 652
Query: 686 HTAIKYISKVTGRVIVVRDANRFHHIKDGTCSCNDYW 722
H IK +SK+T VVRDA RFH +DG CSC DYW
Sbjct: 653 HEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 195 bits (495), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 139/479 (29%), Positives = 235/479 (49%), Gaps = 26/479 (5%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
+R++VSW ++MS N +L F +M G YPNE+ F+ L+AC G
Sbjct: 69 ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
+ G LK G F+ V VG L+DM+ K CG I A +VF ++ +R++++WN M+ F
Sbjct: 129 IHGFCLKIG-FEMMVEVGNSLVDMYSK-CGRINEAEKVFRRIVDRSLISWNAMIAGFVHA 186
Query: 124 GYPEDSIDLFFRMLLSGYT--PDRFTLTSALTACAELELLSVGKQLHSWVIRSGL--ALD 179
GY ++D F M + PD FTLTS L AC+ ++ GKQ+H +++RSG
Sbjct: 187 GYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSS 246
Query: 180 LCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFC 239
+ SLVD+Y KC G L +R+ F+ + E ++SW++LI GY + G+ EAM LF
Sbjct: 247 ATITGSLVDLYVKC---GYLFSARKAFDQIKEKTMISWSSLILGYAQ-EGEFVEAMGLFK 302
Query: 240 DMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSG 299
+ + N + F SS++ A+ G+Q+ + +KL V NS+++MY + G
Sbjct: 303 RLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCG 362
Query: 300 RLECARKCFDLLFEKSLVSCETIVDVIVR-DLNSD------ETLNHETEHTTGIGACSFT 352
++ A KCF + K ++S ++ + L E L H E
Sbjct: 363 LVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPD------EVC 416
Query: 353 YACLLSGAACIGTIGKGEQIHALVVKS-GFETNLSINNALISMYSKCGNKEAALQVFNDM 411
Y +LS + G I +GE++ + ++++ G + + ++ + + G + A + + M
Sbjct: 417 YLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTM 476
Query: 412 GDR-NVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDE 469
+ NV W +++S HG E+ +L K N Y+ + + G +E
Sbjct: 477 PIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAK-NPANYVMMSNLYGQAGYWNE 534
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 478 bits (1229), Expect = e-135, Method: Compositional matrix adjust.
Identities = 244/679 (35%), Positives = 395/679 (58%), Gaps = 11/679 (1%)
Query: 49 LRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCE---LIDMFVKGCGDIESAHRVFEKM 105
L+ C+NS Y +G + ++ T S + LI+++VK C + A ++F+ M
Sbjct: 38 LKVCANSSYLRIGESIHAHLIVTNQ-SSRAEDAYQINSLINLYVK-CRETVRARKLFDLM 95
Query: 106 QERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYT-PDRFTLTSALTACAELELLSVG 164
ERNVV+W MM + G+ + + LF M SG + P+ F T +C+ + G
Sbjct: 96 PERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEG 155
Query: 165 KQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGY 224
KQ H ++ GL V +LV MY+ C+ +G + RV + +P ++ +++ ++GY
Sbjct: 156 KQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAI---RVLDDLPYCDLSVFSSALSGY 212
Query: 225 VRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAV 284
+ G +E + + + N T+ S L+ +NL D Q+HS+ ++ G +A
Sbjct: 213 LE-CGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAE 271
Query: 285 NCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETE-HT 343
+LINMY + G++ A++ FD +++ TI+D +D + +E LN ++ T
Sbjct: 272 VEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDT 331
Query: 344 TGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEA 403
+ +T+A LL+ A + + +G+ +H LV+KSG+ ++ + NAL++MY+K G+ E
Sbjct: 332 KEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIED 391
Query: 404 ALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSH 463
A + F+ M R+++TW ++ISG + HG +ALE F M+ TG PN +T+I VL ACSH
Sbjct: 392 ARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSH 451
Query: 464 VGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWR 523
+G +++G +FN + V P ++HY C+V +L ++G+ +A +F+ + P++ D + WR
Sbjct: 452 IGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWR 511
Query: 524 SLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKK 583
+LL +C V N LG+ A+ +E+ P+D Y+LLSN++A W VA +R M +
Sbjct: 512 TLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRG 571
Query: 584 IIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTDFVLHDVE 643
+ KE G SWI + NQ H F D HP+ IY ++ E+ SKIK LGY P+ HDV+
Sbjct: 572 VKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVD 631
Query: 644 DEQKEQYLFQHSEKIAVAFALISIPNPKPIRIFKNLRVCGDCHTAIKYISKVTGRVIVVR 703
+EQ+E L HSEK+AVA+ LI P P+ + KN+R+C DCH+AIK ISK++ R IV+R
Sbjct: 632 EEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIVIR 691
Query: 704 DANRFHHIKDGTCSCNDYW 722
D+NRFHH DG CSC DYW
Sbjct: 692 DSNRFHHFLDGQCSCCDYW 710
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 124/434 (28%), Positives = 205/434 (47%), Gaps = 48/434 (11%)
Query: 148 LTSALTACAELELLSVGKQLHSWVI---RSGLALDLCVGCSLVDMYAKCAVDGSLVDSRR 204
L L CA L +G+ +H+ +I +S A D SL+++Y KC V +R+
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCR---ETVRARK 90
Query: 205 VFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDM-LQGNVAPNGFTFSSVLKACANL 263
+F+ MPE NVVSW A++ GY + SG + E ++LF M G PN F + V K+C+N
Sbjct: 91 LFDLMPERNVVSWCAMMKGY-QNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNS 149
Query: 264 PDFGFGEQLHSQTIKLGLSAVNCVANSLINMYAR-SGRLECARKCFDL------LFEKSL 316
G+Q H +K GL + V N+L+ MY+ SG E R DL +F +L
Sbjct: 150 GRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSAL 209
Query: 317 ---VSCETI---VDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGE 370
+ C +DV+ + N D N + TY L + + +
Sbjct: 210 SGYLECGAFKEGLDVLRKTANEDFVWN------------NLTYLSSLRLFSNLRDLNLAL 257
Query: 371 QIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHG 430
Q+H+ +V+ GF + ALI+MY KCG A +VF+D +N+ T+I+ + +
Sbjct: 258 QVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDK 317
Query: 431 YATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHY 490
+AL LF +M V PN+ T+ +L++ + + L+ +G HG+V + +
Sbjct: 318 SFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQG-------DLLHGLVLKSGYR 370
Query: 491 ------ACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHG-NTELGEHAAK 543
+V++ +SG + +A + + M D + W +++ C HG E E +
Sbjct: 371 NHVMVGNALVNMYAKSGSIEDARKAFSGMTF-RDIVTWNTMISGCSHHGLGREALEAFDR 429
Query: 544 MILEREPHDPATYI 557
MI E + T+I
Sbjct: 430 MIFTGEIPNRITFI 443
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 126/486 (25%), Positives = 226/486 (46%), Gaps = 16/486 (3%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHG-FYPNEYCFTAALRACSNSLYFSVGR 62
+R++VSWC+MM + N+ + E L F M G PNE+ T ++CSNS G+
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGK 156
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
G LK G SH V L+ M+ G+ E A RV + + ++ ++ ++ + +
Sbjct: 157 QFHGCFLKYGLI-SHEFVRNTLVYMYSLCSGNGE-AIRVLDDLPYCDLSVFSSALSGYLE 214
Query: 123 MGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCV 182
G ++ +D+ + + + T S+L + L L++ Q+HS ++R G ++
Sbjct: 215 CGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEA 274
Query: 183 GCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDML 242
+L++MY KC G ++ ++RVF+ N+ T ++ Y + E EA+ LF M
Sbjct: 275 CGALINMYGKC---GKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFE-EALNLFSKMD 330
Query: 243 QGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLE 302
V PN +TF+ +L + A L G+ LH +K G V N+L+NMYA+SG +E
Sbjct: 331 TKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIE 390
Query: 303 CARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGAA 361
ARK F + + +V+ T++ E L + TG T+ +L +
Sbjct: 391 DARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACS 450
Query: 362 CIGTIGKG-EQIHALVVKSGFETNLSINNALISMYSKCGN-KEAALQVFNDMGDRNVITW 419
IG + +G + L+ K + ++ ++ + SK G K+A + + +V+ W
Sbjct: 451 HIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAW 510
Query: 420 TSIISGFAKHGYATKALELFYEMLETGVK--PNDVTYIAVLSACSHVGLIDEGWKHFNSM 477
++++ Y + L ++ E ++ PND +LS EG S+
Sbjct: 511 RTLLNA----CYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSL 566
Query: 478 RHCHGV 483
+ GV
Sbjct: 567 MNNRGV 572
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 477 bits (1227), Expect = e-134, Method: Compositional matrix adjust.
Identities = 260/702 (37%), Positives = 413/702 (58%), Gaps = 32/702 (4%)
Query: 35 EHGFYPNEYCFTAALRACSNSLYFSVGRV-----VFGSVLKTGYFDSHVSVGCELIDMFV 89
G N + FT+ L+ L+ S+ + + ++K GY DS+ VG LI+ +
Sbjct: 139 REGHELNPHVFTSFLK-----LFVSLDKAEICPWLHSPIVKLGY-DSNAFVGAALINAY- 191
Query: 90 KGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLT 149
CG ++SA VFE + +++V W +++ + + GY EDS+ L M ++G+ P+ +T
Sbjct: 192 SVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFD 251
Query: 150 SALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSM 209
+AL A L K +H ++++ LD VG L+ +Y + G + D+ +VFN M
Sbjct: 252 TALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQL---GDMSDAFKVFNEM 308
Query: 210 PEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFG 269
P+++VV W+ +IA + + +G EA+ LF M + V PN FT SS+L CA G G
Sbjct: 309 PKNDVVPWSFMIARFCQ-NGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLG 367
Query: 270 EQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRD 329
EQLH +K+G V+N+LI++YA+ +++ A K F L K+ VS T++ V +
Sbjct: 368 EQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVI-VGYEN 426
Query: 330 LNSD--------ETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGF 381
L E L ++ T T++ L A + ++ G Q+H L +K+
Sbjct: 427 LGEGGKAFSMFREALRNQVSVT------EVTFSSALGACASLASMDLGVQVHGLAIKTNN 480
Query: 382 ETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYE 441
++++N+LI MY+KCG+ + A VFN+M +V +W ++ISG++ HG +AL +
Sbjct: 481 AKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDI 540
Query: 442 MLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSG 501
M + KPN +T++ VLS CS+ GLID+G + F SM HG+ P +EHY CMV +LGRSG
Sbjct: 541 MKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSG 600
Query: 502 LLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSN 561
L +A++ I +P + M+WR++L + N E +A+ IL+ P D ATY+L+SN
Sbjct: 601 QLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSN 660
Query: 562 LYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELDE 621
+YA ++W +VA+IRK+MK+ + KE G SWIE + VH F VG + HP + I L+
Sbjct: 661 MYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEW 720
Query: 622 LASKIKKLGYVPNTDFVLHDVEDEQKEQYLFQHSEKIAVAFALISIPNPK-PIRIFKNLR 680
L K + GYVP+ + VL D++DE+K++ L+ HSE++A+A+ L+ +P+ + I I KNLR
Sbjct: 721 LNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLR 780
Query: 681 VCGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGTCSCNDYW 722
+C DCH+A+K IS + R +V+RD NRFHH G CSC D+W
Sbjct: 781 ICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 199 bits (506), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 137/462 (29%), Positives = 232/462 (50%), Gaps = 22/462 (4%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
+D+V W ++SC+ N ++L M GF PN Y F AL+A F + V
Sbjct: 210 KDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGV 269
Query: 65 FGSVLKTGY-FDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
G +LKT Y D V VG L+ ++ + GD+ A +VF +M + +VV W+ M+ RF Q
Sbjct: 270 HGQILKTCYVLDPRVGVG--LLQLYTQ-LGDMSDAFKVFNEMPKNDVVPWSFMIARFCQN 326
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVG 183
G+ +++DLF RM + P+ FTL+S L CA + +G+QLH V++ G LD+ V
Sbjct: 327 GFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVS 386
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQ 243
+L+D+YAKC + V ++F + N VSW +I GY G+ +A +F + L+
Sbjct: 387 NALIDVYAKCEKMDTAV---KLFAELSSKNEVSWNTVIVGY-ENLGEGGKAFSMFREALR 442
Query: 244 GNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLEC 303
V+ TFSS L ACA+L G Q+H IK + V+NSLI+MYA+ G ++
Sbjct: 443 NQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKF 502
Query: 304 ARKCF------DLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLL 357
A+ F D+ +L+S + + + L + + G+ T+ +L
Sbjct: 503 AQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGL-----TFLGVL 557
Query: 358 SGAACIGTIGKGEQ-IHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMG-DRN 415
SG + G I +G++ +++ G E L ++ + + G + A+++ + + +
Sbjct: 558 SGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPS 617
Query: 416 VITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAV 457
V+ W +++S A E+L+ K ++ TY+ V
Sbjct: 618 VMIWRAMLSASMNQNNEEFARRSAEEILKINPK-DEATYVLV 658
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/320 (31%), Positives = 166/320 (51%), Gaps = 16/320 (5%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
K D+V W M++ F N +EA+ F+ M E PNE+ ++ L C+ +G
Sbjct: 310 KNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQ 369
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
+ G V+K G FD + V LID++ K C +++A ++F ++ +N V+WN ++ + +
Sbjct: 370 LHGLVVKVG-FDLDIYVSNALIDVYAK-CEKMDTAVKLFAELSSKNEVSWNTVIVGYENL 427
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVG 183
G + +F L + + T +SAL ACA L + +G Q+H I++ A + V
Sbjct: 428 GEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVS 487
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQ 243
SL+DMYAKC G + ++ VFN M +V SW ALI+GY G ++A+R+ M
Sbjct: 488 NSLIDMYAKC---GDIKFAQSVFNEMETIDVASWNALISGY-STHGLGRQALRILDIMKD 543
Query: 244 GNVAPNGFTFSSVLKACAN--LPDFG---FGEQLHSQTIKLGLSAVNCVANSLINMYARS 298
+ PNG TF VL C+N L D G F + I+ L C ++ + RS
Sbjct: 544 RDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTC----MVRLLGRS 599
Query: 299 GRLECARKCFD-LLFEKSLV 317
G+L+ A K + + +E S++
Sbjct: 600 GQLDKAMKLIEGIPYEPSVM 619
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 147/300 (49%), Gaps = 9/300 (3%)
Query: 164 GKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAG 223
K +H +++ G LDL L++ Y K D D+ +F+ MPE N VS+ L G
Sbjct: 68 AKAIHCDILKKGSCLDLFATNILLNAYVKAGFDK---DALNLFDEMPERNNVSFVTLAQG 124
Query: 224 YVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSA 283
Y Q+ + L+ + + N F+S LK +L LHS +KLG +
Sbjct: 125 YAC-----QDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDS 179
Query: 284 VNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHET-EH 342
V +LIN Y+ G ++ AR F+ + K +V IV V + +++L +
Sbjct: 180 NAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMR 239
Query: 343 TTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKE 402
G ++T+ L + +G + +H ++K+ + + + L+ +Y++ G+
Sbjct: 240 MAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMS 299
Query: 403 AALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACS 462
A +VFN+M +V+ W+ +I+ F ++G+ +A++LF M E V PN+ T ++L+ C+
Sbjct: 300 DAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCA 359
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 124/277 (44%), Gaps = 7/277 (2%)
Query: 252 TFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLL 311
+ ++L+ C D + +H +K G N L+N Y ++G + A FD +
Sbjct: 51 AYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEM 110
Query: 312 FEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQ 371
E++ VS T+ D + H G + L +
Sbjct: 111 PERNNVSFVTLAQGYA---CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPW 167
Query: 372 IHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGY 431
+H+ +VK G+++N + ALI+ YS CG+ ++A VF + ++++ W I+S + ++GY
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGY 227
Query: 432 ATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLID-EGWKHFNSMRHCHGVVPRVEHY 490
+L+L M G PN+ T+ L A +G D H ++ C+ + PRV
Sbjct: 228 FEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVG-- 285
Query: 491 ACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLG 527
++ + + G +S+A + N MP + D + W ++
Sbjct: 286 VGLLQLYTQLGDMSDAFKVFNEMPKN-DVVPWSFMIA 321
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 111/231 (48%), Gaps = 7/231 (3%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR 62
S ++ VSW +++ + N +A F + L + E F++AL AC++ +G
Sbjct: 410 SSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGV 469
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
V G +KT V+V LIDM+ K CGDI+ A VF +M+ +V +WN +++ ++
Sbjct: 470 QVHGLAIKTNN-AKKVAVSNSLIDMYAK-CGDIKFAQSVFNEMETIDVASWNALISGYST 527
Query: 123 MGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRS-GLALDLC 181
G ++ + M P+ T L+ C+ L+ G++ +IR G+ L
Sbjct: 528 HGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLE 587
Query: 182 VGCSLVDMYAKCAVDGSLVDSRRVFNSMP-EHNVVSWTALIAGYVRGSGQE 231
+V + + G L + ++ +P E +V+ W A+++ + + +E
Sbjct: 588 HYTCMVRLLGR---SGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEE 635
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 476 bits (1225), Expect = e-134, Method: Compositional matrix adjust.
Identities = 246/628 (39%), Positives = 370/628 (58%), Gaps = 14/628 (2%)
Query: 105 MQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVG 164
+ + +V +WN ++ A+ G +++ F M P R + A+ AC+ L + G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 165 KQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGY 224
KQ H G D+ V +L+ MY+ C G L D+R+VF+ +P+ N+VSWT++I GY
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTC---GKLEDARKVFDEIPKRNIVSWTSMIRGY 152
Query: 225 VRGSGQEQEAMRLFCDMLQGNVAPNGFTF------SSVLKACANLPDFGFGEQLHSQTIK 278
+G +A+ LF D+L + F SV+ AC+ +P G E +HS IK
Sbjct: 153 -DLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIK 211
Query: 279 LGLSAVNCVANSLINMYARSGR--LECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETL 336
G V N+L++ YA+ G + ARK FD + +K VS +I+ V + S+E
Sbjct: 212 RGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAF 271
Query: 337 N--HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISM 394
+ + T + +L + G + G+ IH V++ G E ++ + ++I M
Sbjct: 272 EVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDM 331
Query: 395 YSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTY 454
Y KCG E A + F+ M ++NV +WT++I+G+ HG+A KALELF M+++GV+PN +T+
Sbjct: 332 YCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITF 391
Query: 455 IAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMP 514
++VL+ACSH GL EGW+ FN+M+ GV P +EHY CMVD+LGR+G L +A + I M
Sbjct: 392 VSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMK 451
Query: 515 LDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAA 574
+ D+++W SLL +CR+H N EL E + + E + + Y+LLS++YA RW DV
Sbjct: 452 MKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVER 511
Query: 575 IRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELDELASKIKKLGYVPN 634
+R MK + ++K G+S +E+ +VH F +GD HPQ +KIY+ L EL K+ + GYV N
Sbjct: 512 VRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSN 571
Query: 635 TDFVLHDVEDEQKEQYLFQHSEKIAVAFALISIPNPKPIRIFKNLRVCGDCHTAIKYISK 694
T V HDV++E+KE L HSEK+A+AF +++ + + KNLRVC DCH IK ISK
Sbjct: 572 TSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISK 631
Query: 695 VTGRVIVVRDANRFHHIKDGTCSCNDYW 722
+ R VVRDA RFHH KDG CSC DYW
Sbjct: 632 IVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 120/470 (25%), Positives = 219/470 (46%), Gaps = 53/470 (11%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
K D+ SW S+++ A + EAL+ F M + YP F A++ACS+ G+
Sbjct: 38 KTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQ 97
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
GY S + V LI M+ CG +E A +VF+++ +RN+V+W M+ +
Sbjct: 98 THQQAFVFGY-QSDIFVSSALIVMY-STCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 124 GYPEDSIDLFFRMLL------SGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLA 177
G D++ LF +L+ D L S ++AC+ + + + +HS+VI+ G
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215
Query: 178 LDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRL 237
+ VG +L+D YAK +G + +R++F+ + + + VS+ ++++ Y + SG EA +
Sbjct: 216 RGVSVGNTLLDAYAKGG-EGGVAVARKIFDQIVDKDRVSYNSIMSVYAQ-SGMSNEAFEV 273
Query: 238 FCDMLQGNVAP-NGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYA 296
F +++ V N T S+VL A ++ G+ +H Q I++GL V S+I+MY
Sbjct: 274 FRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYC 333
Query: 297 RSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACL 356
+ GR+E ARK FD + K++ S + +
Sbjct: 334 KCGRVETARKAFDRMKNKNVRS----------------------------------WTAM 359
Query: 357 LSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNV 416
++G G K ++ ++ SG N ++++ S G + FN M R
Sbjct: 360 IAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFG 419
Query: 417 IT-----WTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSAC 461
+ + ++ + G+ KA +L M +KP+ + + ++L+AC
Sbjct: 420 VEPGLEHYGCMVDLLGRAGFLQKAYDLIQRM---KMKPDSIIWSSLLAAC 466
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 475 bits (1222), Expect = e-134, Method: Compositional matrix adjust.
Identities = 263/722 (36%), Positives = 414/722 (57%), Gaps = 17/722 (2%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTF-LDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
RD+ +W M+S + E + F L ML G P+ F + L+AC + G
Sbjct: 115 RDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVI---DGNK 171
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
+ LK G F V V LI ++ + + +A +F++M R++ +WN M++ + Q
Sbjct: 172 IHCLALKFG-FMWDVYVAASLIHLYSR-YKAVGNARILFDEMPVRDMGSWNAMISGYCQS 229
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVG 183
G ++++ L + D T+ S L+AC E + G +HS+ I+ GL +L V
Sbjct: 230 GNAKEALTLSNGL----RAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVS 285
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQ 243
L+D+YA+ G L D ++VF+ M +++SW ++I Y Q A+ LF +M
Sbjct: 286 NKLIDLYAEF---GRLRDCQKVFDRMYVRDLISWNSIIKAYELNE-QPLRAISLFQEMRL 341
Query: 244 GNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVN-CVANSLINMYARSGRLE 302
+ P+ T S+ + L D + T++ G + + N+++ MYA+ G ++
Sbjct: 342 SRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVD 401
Query: 303 CARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN--HETEHTTGIGACSFTYACLLSGA 360
AR F+ L ++S TI+ ++ + E + + E I A T+ +L
Sbjct: 402 SARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPAC 461
Query: 361 ACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWT 420
+ G + +G ++H ++K+G ++ + +L MY KCG E AL +F + N + W
Sbjct: 462 SQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWN 521
Query: 421 SIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHC 480
++I+ HG+ KA+ LF EML+ GVKP+ +T++ +LSACSH GL+DEG F M+
Sbjct: 522 TLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTD 581
Query: 481 HGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEH 540
+G+ P ++HY CMVD+ GR+G L A++FI SM L DA +W +LL +CRVHGN +LG+
Sbjct: 582 YGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKI 641
Query: 541 AAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVH 600
A++ + E EP ++LLSN+YA+ +W V IR K + K G+S +EV+N+V
Sbjct: 642 ASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVE 701
Query: 601 KFHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTDFVLHDVEDEQKEQYLFQHSEKIAV 660
F+ G+ +HP +++Y EL L +K+K +GYVP+ FVL DVED++KE L HSE++A+
Sbjct: 702 VFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAI 761
Query: 661 AFALISIPNPKPIRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGTCSCND 720
AFALI+ P IRIFKNLRVCGDCH+ K+ISK+T R I+VRD+NRFHH K+G CSC D
Sbjct: 762 AFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGD 821
Query: 721 YW 722
YW
Sbjct: 822 YW 823
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 193/415 (46%), Gaps = 48/415 (11%)
Query: 161 LSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTAL 220
L K LH+ ++ S ++C+ LV++Y C + G++ +R F+ + +V +W +
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLY--CYL-GNVALARHTFDHIQNRDVYAWNLM 123
Query: 221 IAGYVRGSGQEQEAMRLFC-DMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKL 279
I+GY R +G E +R F ML + P+ TF SVLKAC + D G ++H +K
Sbjct: 124 ISGYGR-AGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKF 179
Query: 280 GLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHE 339
G VA SLI++Y+R + AR FD + + + S ++ + N+ E L
Sbjct: 180 GFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALT-- 237
Query: 340 TEHTTGIGAC-SFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKC 398
+ G+ A S T LLS G +G IH+ +K G E+ L ++N LI +Y++
Sbjct: 238 --LSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEF 295
Query: 399 GNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVL 458
G +VF+ M R++I+W SII + + +A+ LF EM + ++P+ +T I++
Sbjct: 296 GRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLA 355
Query: 459 SACSHVGLI-----------DEGW------------------KHFNSMRHCHGVVPRVE- 488
S S +G I +GW +S R +P +
Sbjct: 356 SILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDV 415
Query: 489 -HYACMVDVLGRSGLLSEAIEFINSM----PLDADAMVWRSLLGSCRVHGNTELG 538
+ ++ ++G SEAIE N M + A+ W S+L +C G G
Sbjct: 416 ISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQG 470
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 15/187 (8%)
Query: 351 FTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFND 410
F Y L A C+ HA +V S N+ I+ L+++Y GN A F+
Sbjct: 61 FRYCTNLQSAKCL---------HARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDH 111
Query: 411 MGDRNVITWTSIISGFAKHGYATKALELF-YEMLETGVKPNDVTYIAVLSACSHVGLIDE 469
+ +R+V W +ISG+ + G +++ + F ML +G+ P+ T+ +VL AC V ID
Sbjct: 112 IQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTV--IDG 169
Query: 470 GWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSC 529
H +++ G + V A ++ + R + A + MP+ D W +++
Sbjct: 170 NKIHCLALK--FGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPV-RDMGSWNAMISGY 226
Query: 530 RVHGNTE 536
GN +
Sbjct: 227 CQSGNAK 233
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 473 bits (1218), Expect = e-133, Method: Compositional matrix adjust.
Identities = 246/655 (37%), Positives = 381/655 (58%), Gaps = 35/655 (5%)
Query: 102 FEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELL 161
F+ ++ V+ W ++ F ++ F M SG PD S L +C + L
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 162 SVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLV--------------------- 200
G+ +H +++R G+ DL G +L++MYAK GS +
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 201 -----------DS-RRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAP 248
DS RRVF MP +VVS+ +IAGY + SG ++A+R+ +M ++ P
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQ-SGMYEDALRMVREMGTTDLKP 240
Query: 249 NGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCF 308
+ FT SSVL + D G+++H I+ G+ + + +SL++MYA+S R+E + + F
Sbjct: 241 DSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVF 300
Query: 309 DLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTG-IGACSFTYACLLSGAACIGTIG 367
L+ + +S ++V V++ +E L + T + + ++ ++ A + T+
Sbjct: 301 SRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLH 360
Query: 368 KGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFA 427
G+Q+H V++ GF +N+ I +AL+ MYSKCGN +AA ++F+ M + ++WT+II G A
Sbjct: 361 LGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHA 420
Query: 428 KHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRV 487
HG+ +A+ LF EM GVKPN V ++AVL+ACSHVGL+DE W +FNSM +G+ +
Sbjct: 421 LHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQEL 480
Query: 488 EHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILE 547
EHYA + D+LGR+G L EA FI+ M ++ VW +LL SC VH N EL E A+ I
Sbjct: 481 EHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFT 540
Query: 548 REPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDT 607
+ + Y+L+ N+YA+ RW ++A +R M++K + K+ SWIE++N+ H F GD
Sbjct: 541 VDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDR 600
Query: 608 SHPQAQKIYDELDELASKIKKLGYVPNTDFVLHDVEDEQKEQYLFQHSEKIAVAFALISI 667
SHP KI + L + +++K GYV +T VLHDV++E K + LF HSE++AVAF +I+
Sbjct: 601 SHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINT 660
Query: 668 PNPKPIRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGTCSCNDYW 722
IR+ KN+R+C DCH AIK+ISK+T R I+VRD +RFHH G CSC DYW
Sbjct: 661 EPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 134/476 (28%), Positives = 234/476 (49%), Gaps = 47/476 (9%)
Query: 7 LVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFG 66
+++W S++ CF + S+ +AL +F++M G P+ F + L++C+ + G V G
Sbjct: 70 VLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHG 129
Query: 67 SVLKTGYFDSHVSVGCELIDMFVK----------------------GCGD---------- 94
+++ G D + G L++M+ K GD
Sbjct: 130 FIVRLG-MDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIM 188
Query: 95 ---IESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSA 151
I+S RVFE M ++VV++N ++ +AQ G ED++ + M + PD FTL+S
Sbjct: 189 PFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSV 248
Query: 152 LTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPE 211
L +E + GK++H +VIR G+ D+ +G SLVDMYAK A + DS RVF+ +
Sbjct: 249 LPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSA---RIEDSERVFSRLYC 305
Query: 212 HNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQ 271
+ +SW +L+AGYV+ +G+ EA+RLF M+ V P FSSV+ ACA+L G+Q
Sbjct: 306 RDGISWNSLVAGYVQ-NGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQ 364
Query: 272 LHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLN 331
LH ++ G + +A++L++MY++ G ++ ARK FD + VS I+ +
Sbjct: 365 LHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGH 424
Query: 332 SDETLN-HETEHTTGIGACSFTYACLLSGAACIGTIGKG-EQIHALVVKSGFETNLSINN 389
E ++ E G+ + +L+ + +G + + +++ G L
Sbjct: 425 GHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYA 484
Query: 390 ALISMYSKCGNKEAALQVFNDM-GDRNVITWTSIISGFAKHGYATKALELFYEMLE 444
A+ + + G E A + M + W++++S + H K LEL ++ E
Sbjct: 485 AVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVH----KNLELAEKVAE 536
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 102/416 (24%), Positives = 194/416 (46%), Gaps = 56/416 (13%)
Query: 162 SVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALI 221
S KQLH+ IR+ +L ++ +Y + + + S P V++W ++I
Sbjct: 22 SQAKQLHAQFIRTQ-SLSHTSASIVISIYTNLKLLHEALLLFKTLKSPP---VLAWKSVI 77
Query: 222 AGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGL 281
+ S +A+ F +M P+ F SVLK+C + D FGE +H ++LG+
Sbjct: 78 RCFTDQS-LFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGM 136
Query: 282 SAVNCVANSLINMYAR-----------------------SGR-------------LECAR 305
N+L+NMYA+ SG ++ R
Sbjct: 137 DCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVR 196
Query: 306 KCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEH-TTGIGACSFTYACLLSGAACIG 364
+ F+++ K +VS TI+ + ++ L E TT + SFT + +L +
Sbjct: 197 RVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYV 256
Query: 365 TIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIIS 424
+ KG++IH V++ G ++++ I ++L+ MY+K E + +VF+ + R+ I+W S+++
Sbjct: 257 DVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVA 316
Query: 425 GFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVV 484
G+ ++G +AL LF +M+ VKP V + +V+ AC+H+ + G + HG V
Sbjct: 317 GYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLG-------KQLHGYV 369
Query: 485 PR------VEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGN 534
R + + +VD+ + G + A + + M + D + W +++ +HG+
Sbjct: 370 LRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV-LDEVSWTAIIMGHALHGH 424
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 138/297 (46%), Gaps = 42/297 (14%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
RD +SW S+++ + N +EAL F M+ P F++ + AC++ +G+ +
Sbjct: 306 RDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQL 365
Query: 65 FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG 124
G VL+ G F S++ + L+DM+ K CG+I++A ++F++M + V+W ++ A G
Sbjct: 366 HGYVLRGG-FGSNIFIASALVDMYSK-CGNIKAARKIFDRMNVLDEVSWTAIIMGHALHG 423
Query: 125 YPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGC 184
+ +++ LF M G P++ + LTAC+ + L+ +W +
Sbjct: 424 HGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVD-----EAWGYFN---------- 468
Query: 185 SLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQG 244
S+ +Y N EH A +A + +G+ +EA M
Sbjct: 469 SMTKVYG--------------LNQELEH-----YAAVADLLGRAGKLEEAYNFISKMC-- 507
Query: 245 NVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLI-NMYARSGR 300
V P G +S++L +C+ + E++ + + + N A L+ NMYA +GR
Sbjct: 508 -VEPTGSVWSTLLSSCSVHKNLELAEKVAEKI--FTVDSENMGAYVLMCNMYASNGR 561
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 471 bits (1212), Expect = e-133, Method: Compositional matrix adjust.
Identities = 239/634 (37%), Positives = 379/634 (59%), Gaps = 10/634 (1%)
Query: 93 GDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSAL 152
GDI A +VF+ + + WN ++ +++ + +D++ ++ M L+ +PD FT L
Sbjct: 67 GDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLL 126
Query: 153 TACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFN--SMP 210
AC+ L L +G+ +H+ V R G D+ V L+ +YAKC GS +R VF +P
Sbjct: 127 KACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGS---ARTVFEGLPLP 183
Query: 211 EHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGE 270
E +VSWTA+++ Y + +G+ EA+ +F M + +V P+ SVL A L D G
Sbjct: 184 ERTIVSWTAIVSAYAQ-NGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGR 242
Query: 271 QLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDL 330
+H+ +K+GL + SL MYA+ G++ A+ FD + +L+ ++ ++
Sbjct: 243 SIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNG 302
Query: 331 NSDETLN--HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSIN 388
+ E ++ HE + + + + +S A +G++ + ++ V +S + ++ I+
Sbjct: 303 YAREAIDMFHEMINKD-VRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFIS 361
Query: 389 NALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVK 448
+ALI M++KCG+ E A VF+ DR+V+ W+++I G+ HG A +A+ L+ M GV
Sbjct: 362 SALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVH 421
Query: 449 PNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIE 508
PNDVT++ +L AC+H G++ EGW FN M H + P+ +HYAC++D+LGR+G L +A E
Sbjct: 422 PNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYE 480
Query: 509 FINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEER 568
I MP+ VW +LL +C+ H + ELGE+AA+ + +P + Y+ LSNLYA
Sbjct: 481 VIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARL 540
Query: 569 WYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELDELASKIKK 628
W VA +R MK+K + K+ G SW+EV ++ F VGD SHP+ ++I +++ + S++K+
Sbjct: 541 WDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKE 600
Query: 629 LGYVPNTDFVLHDVEDEQKEQYLFQHSEKIAVAFALISIPNPKPIRIFKNLRVCGDCHTA 688
G+V N D LHD+ DE+ E+ L HSE+IA+A+ LIS P P+RI KNLR C +CH A
Sbjct: 601 GGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAA 660
Query: 689 IKYISKVTGRVIVVRDANRFHHIKDGTCSCNDYW 722
K ISK+ R IVVRD NRFHH KDG CSC DYW
Sbjct: 661 TKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 211/433 (48%), Gaps = 16/433 (3%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
+ + W +++ ++ N+ +AL+ + +M P+ + F L+ACS + +GR
Sbjct: 81 RPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRF 140
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFE--KMQERNVVTWNLMMTRFA 121
V V + G FD+ V V LI ++ K C + SA VFE + ER +V+W +++ +A
Sbjct: 141 VHAQVFRLG-FDADVFVQNGLIALYAK-CRRLGSARTVFEGLPLPERTIVSWTAIVSAYA 198
Query: 122 QMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLC 181
Q G P +++++F +M PD L S L A L+ L G+ +H+ V++ GL ++
Sbjct: 199 QNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPD 258
Query: 182 VGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDM 241
+ SL MYAKC G + ++ +F+ M N++ W A+I+GY + +G +EA+ +F +M
Sbjct: 259 LLISLNTMYAKC---GQVATAKILFDKMKSPNLILWNAMISGYAK-NGYAREAIDMFHEM 314
Query: 242 LQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVN---CVANSLINMYARS 298
+ +V P+ + +S + ACA + G EQ S +G S ++++LI+M+A+
Sbjct: 315 INKDVRPDTISITSAISACAQV---GSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKC 371
Query: 299 GRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLL 357
G +E AR FD ++ +V ++ + E ++ + G+ T+ LL
Sbjct: 372 GSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLL 431
Query: 358 SGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMG-DRNV 416
G + +G + +I + + G+ + A +V M V
Sbjct: 432 MACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGV 491
Query: 417 ITWTSIISGFAKH 429
W +++S KH
Sbjct: 492 TVWGALLSACKKH 504
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 109/204 (53%), Gaps = 3/204 (1%)
Query: 270 EQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRD 329
+Q+H++ + LGL + LI+ + G + AR+ FD L + I+ R+
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 330 LN-SDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSIN 388
+ D L + + SFT+ LL + + + G +HA V + GF+ ++ +
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 389 NALISMYSKCGNKEAALQVFN--DMGDRNVITWTSIISGFAKHGYATKALELFYEMLETG 446
N LI++Y+KC +A VF + +R +++WT+I+S +A++G +ALE+F +M +
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 447 VKPNDVTYIAVLSACSHVGLIDEG 470
VKP+ V ++VL+A + + + +G
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQG 241
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 14/162 (8%)
Query: 343 TTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKE 402
+GI + SF YA L+ A + +QIHA ++ G + + + LI S G+
Sbjct: 15 NSGIHSDSF-YASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSFGDIT 70
Query: 403 AALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACS 462
A QVF+D+ + W +II G++++ + AL ++ M V P+ T+ +L ACS
Sbjct: 71 FARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACS 130
Query: 463 HVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLS 504
G H R H V R+ A DV ++GL++
Sbjct: 131 -------GLSHLQMGRFVHAQVFRLGFDA---DVFVQNGLIA 162
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 471 bits (1211), Expect = e-132, Method: Compositional matrix adjust.
Identities = 256/692 (36%), Positives = 388/692 (56%), Gaps = 39/692 (5%)
Query: 66 GSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGY 125
G +++TG F S + +E A +VF+++ + N WN ++ +A
Sbjct: 51 GHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPD 110
Query: 126 PEDSIDLFFRMLL-SGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGC 184
P SI F M+ S P+++T + A AE+ LS+G+ LH ++S + D+ V
Sbjct: 111 PVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVAN 170
Query: 185 SLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQG 244
SL+ Y C G L + +VF ++ E +VVSW ++I G+V+ G +A+ LF M
Sbjct: 171 SLIHCYFSC---GDLDSACKVFTTIKEKDVVSWNSMINGFVQ-KGSPDKALELFKKMESE 226
Query: 245 NVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECA 304
+V + T VL ACA + + FG Q+ S + ++ +AN++++MY + G +E A
Sbjct: 227 DVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDA 286
Query: 305 RKCFDLLFEKSLVSCETIVD--VIVRDLNS-DETLN------------------------ 337
++ FD + EK V+ T++D I D + E LN
Sbjct: 287 KRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPN 346
Query: 338 ------HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNAL 391
HE + + T LS A +G + G IH+ + K G N + +AL
Sbjct: 347 EALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSAL 406
Query: 392 ISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPND 451
I MYSKCG+ E + +VFN + R+V W+++I G A HG +A+++FY+M E VKPN
Sbjct: 407 IHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNG 466
Query: 452 VTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFIN 511
VT+ V ACSH GL+DE F+ M +G+VP +HYAC+VDVLGRSG L +A++FI
Sbjct: 467 VTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIE 526
Query: 512 SMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYD 571
+MP+ VW +LLG+C++H N L E A +LE EP + ++LLSN+YA +W +
Sbjct: 527 AMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWEN 586
Query: 572 VAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELDELASKIKKLGY 631
V+ +RK M+ + KE G S IE++ +H+F GD +HP ++K+Y +L E+ K+K GY
Sbjct: 587 VSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGY 646
Query: 632 VPNTDFVLHDVEDEQ-KEQYLFQHSEKIAVAFALISIPNPKPIRIFKNLRVCGDCHTAIK 690
P VL +E+E+ KEQ L HSEK+A+ + LIS PK IR+ KNLRVCGDCH+ K
Sbjct: 647 EPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAK 706
Query: 691 YISKVTGRVIVVRDANRFHHIKDGTCSCNDYW 722
IS++ R I+VRD RFHH ++G CSCND+W
Sbjct: 707 LISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 203/425 (47%), Gaps = 43/425 (10%)
Query: 144 DRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSR 203
+R S + C L L KQ H +IR+G D L M A + SL +R
Sbjct: 29 ERSRHISLIERCVSLRQL---KQTHGHMIRTGTFSDPYSASKLFAMAALSSF-ASLEYAR 84
Query: 204 RVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDML-QGNVAPNGFTFSSVLKACAN 262
+VF+ +P+ N +W LI Y G ++ F DM+ + PN +TF ++KA A
Sbjct: 85 KVFDEIPKPNSFAWNTLIRAYASGP-DPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAE 143
Query: 263 LPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETI 322
+ G+ LH +K + + VANSLI+ Y G L+ A K F + EK +VS ++
Sbjct: 144 VSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSM 203
Query: 323 VDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGF 381
++ V+ + D+ L + + + A T +LS A I + G Q+ + + ++
Sbjct: 204 INGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRV 263
Query: 382 ETNLSINNALISMYSKCG-------------------------------NKEAALQVFND 410
NL++ NA++ MY+KCG + EAA +V N
Sbjct: 264 NVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNS 323
Query: 411 MGDRNVITWTSIISGFAKHGYATKALELFYEM-LETGVKPNDVTYIAVLSACSHVGLIDE 469
M ++++ W ++IS + ++G +AL +F+E+ L+ +K N +T ++ LSAC+ VG ++
Sbjct: 324 MPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALEL 383
Query: 470 G-WKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGS 528
G W H S HG+ + ++ + + G L ++ E NS+ D VW +++G
Sbjct: 384 GRWIH--SYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGG 440
Query: 529 CRVHG 533
+HG
Sbjct: 441 LAMHG 445
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 148/303 (48%), Gaps = 17/303 (5%)
Query: 255 SVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARS--GRLECARKCFDLLF 312
S+++ C +L +Q H I+ G + A+ L M A S LE ARK FD +
Sbjct: 35 SLIERCVSLRQL---KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIP 91
Query: 313 EKSLVSCETIVDVIVRDLNSDETLN----HETEHTTGIGACSFTYACLLSGAACIGTIGK 368
+ + + T++ D L+ + + +T+ L+ AA + ++
Sbjct: 92 KPNSFAWNTLIRAYAS--GPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSL 149
Query: 369 GEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAK 428
G+ +H + VKS +++ + N+LI Y CG+ ++A +VF + +++V++W S+I+GF +
Sbjct: 150 GQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQ 209
Query: 429 HGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVE 488
G KALELF +M VK + VT + VLSAC+ + ++ G + S + V +
Sbjct: 210 KGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFG-RQVCSYIEENRVNVNLT 268
Query: 489 HYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILER 548
M+D+ + G + +A ++M + D + W ++L + + E AA+ +L
Sbjct: 269 LANAMLDMYTKCGSIEDAKRLFDAME-EKDNVTWTTMLDGYAISEDYE----AAREVLNS 323
Query: 549 EPH 551
P
Sbjct: 324 MPQ 326
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 109/224 (48%), Gaps = 10/224 (4%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDM-LEHGFYPNEYCFTAALRACSNSLYFSVGR 62
++D+V+W +++S + N +EAL+ F ++ L+ N+ + L AC+ +GR
Sbjct: 326 QKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGR 385
Query: 63 VVFGSVLKTGY-FDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFA 121
+ + K G + HV+ LI M+ K CGD+E + VF +++R+V W+ M+ A
Sbjct: 386 WIHSYIKKHGIRMNFHVTSA--LIHMYSK-CGDLEKSREVFNSVEKRDVFVWSAMIGGLA 442
Query: 122 QMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQL-HSWVIRSGLALDL 180
G +++D+F++M + P+ T T+ AC+ L+ + L H G+ +
Sbjct: 443 MHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEE 502
Query: 181 CVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVS-WTALIAG 223
+VD+ + G L + + +MP S W AL+
Sbjct: 503 KHYACIVDVLGR---SGYLEKAVKFIEAMPIPPSTSVWGALLGA 543
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 466 bits (1200), Expect = e-131, Method: Compositional matrix adjust.
Identities = 233/563 (41%), Positives = 353/563 (62%), Gaps = 6/563 (1%)
Query: 165 KQLHSWVIRSGLAL-DLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH-NVVSWTALIA 222
+Q+H++ IR G+++ D +G L+ + + +VF+ + + NV W LI
Sbjct: 34 RQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIR 93
Query: 223 GYVRGSGQEQEAMRLFCDM-LQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGL 281
GY G A L+ +M + G V P+ T+ ++KA + D GE +HS I+ G
Sbjct: 94 GYAE-IGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGF 152
Query: 282 SAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETE 341
++ V NSL+++YA G + A K FD + EK LV+ ++++ + +E L TE
Sbjct: 153 GSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTE 212
Query: 342 -HTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGN 400
++ GI FT LLS A IG + G+++H ++K G NL +N L+ +Y++CG
Sbjct: 213 MNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGR 272
Query: 401 KEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLET-GVKPNDVTYIAVLS 459
E A +F++M D+N ++WTS+I G A +G+ +A+ELF M T G+ P ++T++ +L
Sbjct: 273 VEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILY 332
Query: 460 ACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADA 519
ACSH G++ EG+++F MR + + PR+EH+ CMVD+L R+G + +A E+I SMP+ +
Sbjct: 333 ACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNV 392
Query: 520 MVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTM 579
++WR+LLG+C VHG+++L E A IL+ EP+ Y+LLSN+YA+E+RW DV IRK M
Sbjct: 393 VIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQM 452
Query: 580 KQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTDFVL 639
+ + K G+S +EV N+VH+F +GD SHPQ+ IY +L E+ +++ GYVP V
Sbjct: 453 LRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVY 512
Query: 640 HDVEDEQKEQYLFQHSEKIAVAFALISIPNPKPIRIFKNLRVCGDCHTAIKYISKVTGRV 699
DVE+E+KE + HSEKIA+AF LIS P PI + KNLRVC DCH AIK +SKV R
Sbjct: 513 VDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNRE 572
Query: 700 IVVRDANRFHHIKDGTCSCNDYW 722
IVVRD +RFHH K+G+CSC DYW
Sbjct: 573 IVVRDRSRFHHFKNGSCSCQDYW 595
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 177/339 (52%), Gaps = 10/339 (2%)
Query: 98 AHRVFEKMQER-NVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYT-PDRFTLTSALTAC 155
AH+VF K+++ NV WN ++ +A++G + L+ M +SG PD T + A
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 156 AELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVV 215
+ + +G+ +HS VIRSG + V SL+ +YA C G + + +VF+ MPE ++V
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANC---GDVASAYKVFDKMPEKDLV 188
Query: 216 SWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQ 275
+W ++I G+ +G+ +EA+ L+ +M + P+GFT S+L ACA + G+++H
Sbjct: 189 AWNSVINGFAE-NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVY 247
Query: 276 TIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCET-IVDVIVRDLNSDE 334
IK+GL+ +N L+++YAR GR+E A+ FD + +K+ VS + IV + V +
Sbjct: 248 MIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEA 307
Query: 335 T-LNHETEHTTGIGACSFTYACLLSGAACIGTIGKG-EQIHALVVKSGFETNLSINNALI 392
L E T G+ C T+ +L + G + +G E + + E + ++
Sbjct: 308 IELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMV 367
Query: 393 SMYSKCGNKEAALQVFNDMG-DRNVITWTSIISGFAKHG 430
+ ++ G + A + M NV+ W +++ HG
Sbjct: 368 DLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 406
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 146/255 (57%), Gaps = 8/255 (3%)
Query: 10 WCSMMSCFANNSMEHEALVTFLDMLEHGFY-PNEYCFTAALRACSNSLYFSVGRVVFGSV 68
W +++ +A A + +M G P+ + + ++A + +G + V
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 69 LKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPED 128
+++G F S + V L+ ++ CGD+ SA++VF+KM E+++V WN ++ FA+ G PE+
Sbjct: 148 IRSG-FGSLIYVQNSLLHLYA-NCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEE 205
Query: 129 SIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVD 188
++ L+ M G PD FT+ S L+ACA++ L++GK++H ++I+ GL +L L+D
Sbjct: 206 ALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLD 265
Query: 189 MYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGY-VRGSGQEQEAMRLFCDMLQGNVA 247
+YA+C G + +++ +F+ M + N VSWT+LI G V G G+E + + + +G +
Sbjct: 266 LYARC---GRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG-LL 321
Query: 248 PNGFTFSSVLKACAN 262
P TF +L AC++
Sbjct: 322 PCEITFVGILYACSH 336
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 137/287 (47%), Gaps = 16/287 (5%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
++DLV+W S+++ FA N EAL + +M G P+ + + L AC+ ++G+
Sbjct: 184 EKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKR 243
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
V ++K G ++ L+D++ + CG +E A +F++M ++N V+W ++ A
Sbjct: 244 VHVYMIKVG-LTRNLHSSNVLLDLYAR-CGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVN 301
Query: 124 GYPEDSIDLFFRM-LLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCV 182
G+ +++I+LF M G P T L AC+ ++ G + +R ++ +
Sbjct: 302 GFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRR-MREEYKIEPRI 360
Query: 183 ---GCSLVDMYAKCAVDGSLVDSRRVFNSMP-EHNVVSWTALI-AGYVRGSGQEQEAMRL 237
GC +VD+ A+ G + + SMP + NVV W L+ A V G E R+
Sbjct: 361 EHFGC-MVDLLARA---GQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARI 416
Query: 238 FCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAV 284
L+ N + + S++ + D +++ Q ++ G+ V
Sbjct: 417 QILQLEPNHSGDYVLLSNMYASEQRWSDV---QKIRKQMLRDGVKKV 460
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 466 bits (1200), Expect = e-131, Method: Compositional matrix adjust.
Identities = 255/703 (36%), Positives = 400/703 (56%), Gaps = 19/703 (2%)
Query: 24 HEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCE 83
+EA +M + G + Y + AC S GR++ ++ G + V +
Sbjct: 65 NEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDR-MRMGIENPSVLLQNC 123
Query: 84 LIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTP 143
++ M+ + C +E A ++F++M E N V+ M++ +A+ G + ++ LF ML SG P
Sbjct: 124 VLQMYCE-CRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKP 182
Query: 144 DRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSR 203
T+ L + L G+Q+H+ VIR+GL + + +V+MY KC G LV ++
Sbjct: 183 PSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKC---GWLVGAK 239
Query: 204 RVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANL 263
RVF+ M V+ T L+ GY + +G+ ++A++LF D++ V + F FS VLKACA+L
Sbjct: 240 RVFDQMAVKKPVACTGLMVGYTQ-AGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASL 298
Query: 264 PDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIV 323
+ G+Q+H+ KLGL + V L++ Y + E A + F + E + VS I+
Sbjct: 299 EELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAII 358
Query: 324 DVIVRDLNSDETLNHETEHTTGIGAC--SFTYACLLSGAACIGTIGKGEQIHALVVKSGF 381
+ +E + + + SFTY + + + G Q+HA +K
Sbjct: 359 SGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSL 418
Query: 382 ETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYE 441
+ +ALI+MYSKCG + A +VF M + +++ WT+ ISG A +G A++AL LF +
Sbjct: 419 IGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEK 478
Query: 442 MLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSG 501
M+ G+KPN VT+IAVL+ACSH GL+++G ++M + V P ++HY CM+D+ RSG
Sbjct: 479 MVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSG 538
Query: 502 LLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSN 561
LL EA++F+ +MP + DAM W+ L C H N ELGE A + + + +P D A Y+L N
Sbjct: 539 LLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFN 598
Query: 562 LYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELDE 621
LY +W + A + K M ++ + KE SWI+ + ++H+F VGD HPQ Q+IY++L E
Sbjct: 599 LYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKE 658
Query: 622 LASKIKKLGYVPNTDFVLHDVEDEQKEQYLFQHSEKIAVAFALISIPN--PKPIRIFKNL 679
G++ F + E++EQ L HSE++A+AF LIS+ P PI++FKNL
Sbjct: 659 FD------GFMEGDMFQCNMT--ERREQ-LLDHSERLAIAFGLISVHGNAPAPIKVFKNL 709
Query: 680 RVCGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGTCSCNDYW 722
R C DCH K++S VTG IV+RD+ RFHH K+G CSCNDYW
Sbjct: 710 RACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 152 bits (385), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 111/430 (25%), Positives = 206/430 (47%), Gaps = 20/430 (4%)
Query: 114 NLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIR 173
NL + ++ ++ + M +G + ++ AC EL LS G+ LH +R
Sbjct: 52 NLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHD-RMR 110
Query: 174 SGLA-----LDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGS 228
G+ L CV + MY +C SL D+ ++F+ M E N VS T +I+ Y
Sbjct: 111 MGIENPSVLLQNCV----LQMYCECR---SLEDADKLFDEMSELNAVSRTTMISAYAE-Q 162
Query: 229 GQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVA 288
G +A+ LF ML P ++++LK+ N FG Q+H+ I+ GL + +
Sbjct: 163 GILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIE 222
Query: 289 NSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTT-GIG 347
++NMY + G L A++ FD + K V+C ++ + + + L + T G+
Sbjct: 223 TGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVE 282
Query: 348 ACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQV 407
SF ++ +L A + + G+QIHA V K G E+ +S+ L+ Y KC + E+A +
Sbjct: 283 WDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRA 342
Query: 408 FNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKP-NDVTYIAVLSACSHVGL 466
F ++ + N ++W++IISG+ + +A++ F + N TY ++ ACS +
Sbjct: 343 FQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLAD 402
Query: 467 IDEGWK-HFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSL 525
+ G + H ++++ ++ + ++ + + G L +A E SM + D + W +
Sbjct: 403 CNIGGQVHADAIK--RSLIGSQYGESALITMYSKCGCLDDANEVFESMD-NPDIVAWTAF 459
Query: 526 LGSCRVHGNT 535
+ +GN
Sbjct: 460 ISGHAYYGNA 469
Score = 142 bits (359), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 181/351 (51%), Gaps = 22/351 (6%)
Query: 8 VSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGS 67
V+ +M + +AL F+D++ G + + F+ L+AC++ ++G+ +
Sbjct: 251 VACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHAC 310
Query: 68 VLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPE 127
V K G +S VSVG L+D ++K C ESA R F++++E N V+W+ +++ + QM E
Sbjct: 311 VAKLG-LESEVSVGTPLVDFYIK-CSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFE 368
Query: 128 DSIDLFFRMLLSGYTP-DRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSL 186
+++ F + + + FT TS AC+ L ++G Q+H+ I+ L +L
Sbjct: 369 EAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESAL 428
Query: 187 VDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNV 246
+ MY+KC G L D+ VF SM ++V+WTA I+G+ G EA+RLF M+ +
Sbjct: 429 ITMYSKC---GCLDDANEVFESMDNPDIVAWTAFISGHAY-YGNASEALRLFEKMVSCGM 484
Query: 247 APNGFTFSSVLKACANLPDFGFGEQ----LHSQTIKLGLSAVNCVANSLINMYARSGRLE 302
PN TF +VL AC++ G EQ L + K ++ + +I++YARSG L+
Sbjct: 485 KPNSVTFIAVLTACSHA---GLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLD 541
Query: 303 CARKCF-DLLFEKSLVS-------CETIVDVIVRDLNSDETLNHETEHTTG 345
A K ++ FE +S C T ++ + ++ +E + E T G
Sbjct: 542 EALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAG 592
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 466 bits (1199), Expect = e-131, Method: Compositional matrix adjust.
Identities = 236/593 (39%), Positives = 368/593 (62%), Gaps = 11/593 (1%)
Query: 129 SIDLFFRM----LLSGYTP-DRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVG 183
S DL R L Y P DR + L C +LL G+ +H+ +++S D+ +G
Sbjct: 39 SNDLLLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMG 98
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQ 243
+L++MYAKC GSL ++R+VF MP+ + V+WT LI+GY + + +A+ F ML+
Sbjct: 99 NTLLNMYAKC---GSLEEARKVFEKMPQRDFVTWTTLISGYSQ-HDRPCDALLFFNQMLR 154
Query: 244 GNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLEC 303
+PN FT SSV+KA A G QLH +K G + V ++L+++Y R G ++
Sbjct: 155 FGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDD 214
Query: 304 ARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGAAC 362
A+ FD L ++ VS ++ R +++ L + G F+YA L +
Sbjct: 215 AQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSS 274
Query: 363 IGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSI 422
G + +G+ +HA ++KSG + N L+ MY+K G+ A ++F+ + R+V++W S+
Sbjct: 275 TGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSL 334
Query: 423 ISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHG 482
++ +A+HG+ +A+ F EM G++PN++++++VL+ACSH GL+DEGW ++ M+ G
Sbjct: 335 LTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKK-DG 393
Query: 483 VVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAA 542
+VP HY +VD+LGR+G L+ A+ FI MP++ A +W++LL +CR+H NTELG +AA
Sbjct: 394 IVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAA 453
Query: 543 KMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKF 602
+ + E +P DP +++L N+YA+ RW D A +RK MK+ + KE SW+E+EN +H F
Sbjct: 454 EHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMF 513
Query: 603 HVGDTSHPQAQKIYDELDELASKIKKLGYVPNTDFVLHDVEDEQKEQYLFQHSEKIAVAF 662
D HPQ ++I + +E+ +KIK+LGYVP+T V+ V+ +++E L HSEKIA+AF
Sbjct: 514 VANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAF 573
Query: 663 ALISIPNPKPIRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGT 715
AL++ P I I KN+RVCGDCHTAIK SKV GR I+VRD NRFHH KD +
Sbjct: 574 ALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDAS 626
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/427 (28%), Positives = 217/427 (50%), Gaps = 12/427 (2%)
Query: 34 LEHGFYPNEYCF-TAALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGC 92
LE + P + F L+ C+ GR+V +L++ F + +G L++M+ K C
Sbjct: 51 LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQS-IFRHDIVMGNTLLNMYAK-C 108
Query: 93 GDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSAL 152
G +E A +VFEKM +R+ VTW +++ ++Q P D++ F +ML GY+P+ FTL+S +
Sbjct: 109 GSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVI 168
Query: 153 TACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH 212
A A G QLH + ++ G ++ VG +L+D+Y + G + D++ VF+++
Sbjct: 169 KAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRY---GLMDDAQLVFDALESR 225
Query: 213 NVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQL 272
N VSW ALIAG+ R SG E+ A+ LF ML+ P+ F+++S+ AC++ G+ +
Sbjct: 226 NDVSWNALIAGHARRSGTEK-ALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWV 284
Query: 273 HSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVR-DLN 331
H+ IK G V N+L++MYA+SG + ARK FD L ++ +VS +++ +
Sbjct: 285 HAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFG 344
Query: 332 SDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNAL 391
+ E GI ++ +L+ + G + +G + L+ K G +
Sbjct: 345 KEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTV 404
Query: 392 ISMYSKCGNKEAALQVFNDMG-DRNVITWTSIISGFAKHG---YATKALELFYEMLETGV 447
+ + + G+ AL+ +M + W ++++ H A E +E+
Sbjct: 405 VDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDP 464
Query: 448 KPNDVTY 454
P+ + Y
Sbjct: 465 GPHVILY 471
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 167/301 (55%), Gaps = 6/301 (1%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
+RD V+W +++S ++ + +AL+ F ML G+ PNE+ ++ ++A + G
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
+ G +K G FDS+V VG L+D++ + G ++ A VF+ ++ RN V+WN ++ A+
Sbjct: 183 LHGFCVKCG-FDSNVHVGSALLDLYTR-YGLMDDAQLVFDALESRNDVSWNALIAGHARR 240
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVG 183
E +++LF ML G+ P F+ S AC+ L GK +H+++I+SG L G
Sbjct: 241 SGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAG 300
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQ 243
+L+DMYAK GS+ D+R++F+ + + +VVSW +L+ Y + G +EA+ F +M +
Sbjct: 301 NTLLDMYAKS---GSIHDARKIFDRLAKRDVVSWNSLLTAYAQ-HGFGKEAVWWFEEMRR 356
Query: 244 GNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLEC 303
+ PN +F SVL AC++ G + K G+ +++++ R+G L
Sbjct: 357 VGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNR 416
Query: 304 A 304
A
Sbjct: 417 A 417
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 9/120 (7%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR 62
+KRD+VSW S+++ +A + EA+ F +M G PNE F + L ACS+S G
Sbjct: 324 AKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGW 383
Query: 63 VVFGSVLKTGYFDS---HVSVGCELIDMFVKGCGDIESAHRVFEKMQ-ERNVVTWNLMMT 118
+ + K G +V+V +D+ + GD+ A R E+M E W ++
Sbjct: 384 HYYELMKKDGIVPEAWHYVTV----VDLLGRA-GDLNRALRFIEEMPIEPTAAIWKALLN 438
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 466 bits (1198), Expect = e-131, Method: Compositional matrix adjust.
Identities = 252/674 (37%), Positives = 376/674 (55%), Gaps = 24/674 (3%)
Query: 60 VGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTR 119
+GRVV ++KT + LI+M+ K ESA V RNVV+W +++
Sbjct: 24 LGRVVHARIVKTLDSPPPPFLANYLINMYSK-LDHPESARLVLRLTPARNVVSWTSLISG 82
Query: 120 FAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALD 179
AQ G+ ++ FF M G P+ FT A A A L L GKQ+H+ ++ G LD
Sbjct: 83 LAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILD 142
Query: 180 LCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFC 239
+ VGCS DMY K + D+R++F+ +PE N+ +W A I+ V G+ +EA+ F
Sbjct: 143 VFVGCSAFDMYCKTRLRD---DARKLFDEIPERNLETWNAFISNSVT-DGRPREAIEAFI 198
Query: 240 DMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSG 299
+ + + PN TF + L AC++ G QLH ++ G V N LI+ Y +
Sbjct: 199 EFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCK 258
Query: 300 RLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTG---------IGACS 350
++ + F + K+ VS ++V V+ NHE E + +
Sbjct: 259 QIRSSEIIFTEMGTKNAVSWCSLVAAYVQ--------NHEDEKASVLYLRSRKDIVETSD 310
Query: 351 FTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFND 410
F + +LS A + + G IHA VK+ E + + +AL+ MY KCG E + Q F++
Sbjct: 311 FMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDE 370
Query: 411 MGDRNVITWTSIISGFAKHGYATKALELFYEMLETGV--KPNDVTYIAVLSACSHVGLID 468
M ++N++T S+I G+A G AL LF EM G PN +T++++LSACS G ++
Sbjct: 371 MPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVE 430
Query: 469 EGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGS 528
G K F+SMR +G+ P EHY+C+VD+LGR+G++ A EFI MP+ VW +L +
Sbjct: 431 NGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNA 490
Query: 529 CRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEA 588
CR+HG +LG AA+ + + +P D ++LLSN +A RW + +R+ +K I K A
Sbjct: 491 CRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGA 550
Query: 589 GYSWIEVENQVHKFHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTDFVLHDVEDEQKE 648
GYSWI V+NQVH F D SH ++I L +L ++++ GY P+ L+D+E+E+K
Sbjct: 551 GYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKA 610
Query: 649 QYLFQHSEKIAVAFALISIPNPKPIRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRF 708
+ HSEK+A+AF L+S+P PIRI KNLR+CGDCH+ K++S R I+VRD NRF
Sbjct: 611 AEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRF 670
Query: 709 HHIKDGTCSCNDYW 722
H KDG CSC DYW
Sbjct: 671 HRFKDGICSCKDYW 684
Score = 176 bits (445), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 122/431 (28%), Positives = 204/431 (47%), Gaps = 11/431 (2%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
R++VSW S++S A N ALV F +M G PN++ F A +A ++ G+ +
Sbjct: 71 RNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQI 130
Query: 65 FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG 124
+K G V VGC DM+ K + A ++F+++ ERN+ TWN ++ G
Sbjct: 131 HALAVKCGRI-LDVFVGCSAFDMYCK-TRLRDDARKLFDEIPERNLETWNAFISNSVTDG 188
Query: 125 YPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGC 184
P ++I+ F P+ T + L AC++ L++G QLH V+RSG D+ V
Sbjct: 189 RPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCN 248
Query: 185 SLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQG 244
L+D Y KC + S +F M N VSW +L+A YV+ ++++A L+ +
Sbjct: 249 GLIDFYGKCK---QIRSSEIIFTEMGTKNAVSWCSLVAAYVQNH-EDEKASVLYLRSRKD 304
Query: 245 NVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECA 304
V + F SSVL ACA + G +H+ +K + V ++L++MY + G +E +
Sbjct: 305 IVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDS 364
Query: 305 RKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACS--FTYACLLSGAA 361
+ FD + EK+LV+ +++ D L E G G T+ LLS +
Sbjct: 365 EQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACS 424
Query: 362 CIGTIGKGEQI-HALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVIT-W 419
G + G +I ++ G E + ++ M + G E A + M + I+ W
Sbjct: 425 RAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVW 484
Query: 420 TSIISGFAKHG 430
++ + HG
Sbjct: 485 GALQNACRMHG 495
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 158/308 (51%), Gaps = 17/308 (5%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
+R+L +W + +S + EA+ F++ +PN F A L ACS+ L+ ++G
Sbjct: 171 ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQ 230
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
+ G VL++G FD+ VSV LID + K C I S+ +F +M +N V+W ++ + Q
Sbjct: 231 LHGLVLRSG-FDTDVSVCNGLIDFYGK-CKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQN 288
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVG 183
E + L+ R F ++S L+ACA + L +G+ +H+ +++ + + VG
Sbjct: 289 HEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVG 348
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQ 243
+LVDMY KC G + DS + F+ MPE N+V+ +LI GY GQ A+ LF +M
Sbjct: 349 SALVDMYGKC---GCIEDSEQAFDEMPEKNLVTRNSLIGGYAH-QGQVDMALALFEEMAP 404
Query: 244 GNVA--PNGFTFSSVLKACANLPDFGFGEQLHSQT-----IKLGLSAVNCVANSLINMYA 296
PN TF S+L AC+ G ++ I+ G +C+ ++M
Sbjct: 405 RGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCI----VDMLG 460
Query: 297 RSGRLECA 304
R+G +E A
Sbjct: 461 RAGMVERA 468
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 466 bits (1198), Expect = e-131, Method: Compositional matrix adjust.
Identities = 232/538 (43%), Positives = 340/538 (63%), Gaps = 10/538 (1%)
Query: 186 LVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGN 245
L++MY K + L D+ ++F+ MP+ NV+SWT +I+ Y + Q+A+ L ML+ N
Sbjct: 102 LINMYVKFNL---LNDAHQLFDQMPQRNVISWTTMISAYSK-CKIHQKALELLVLMLRDN 157
Query: 246 VAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECAR 305
V PN +T+SSVL++C + D LH IK GL + V ++LI+++A+ G E A
Sbjct: 158 VRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDAL 214
Query: 306 KCFDLLFEKSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGAACIG 364
FD + + +I+ ++ SD L + G A T +L +
Sbjct: 215 SVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLA 274
Query: 365 TIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIIS 424
+ G Q H +VK ++ +L +NNAL+ MY KCG+ E AL+VFN M +R+VITW+++IS
Sbjct: 275 LLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMIS 332
Query: 425 GFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVV 484
G A++GY+ +AL+LF M +G KPN +T + VL ACSH GL+++GW +F SM+ +G+
Sbjct: 333 GLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGID 392
Query: 485 PRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKM 544
P EHY CM+D+LG++G L +A++ +N M + DA+ WR+LLG+CRV N L E+AAK
Sbjct: 393 PVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKK 452
Query: 545 ILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHV 604
++ +P D TY LLSN+YA ++W V IR M+ + I KE G SWIEV Q+H F +
Sbjct: 453 VIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFII 512
Query: 605 GDTSHPQAQKIYDELDELASKIKKLGYVPNTDFVLHDVEDEQKEQYLFQHSEKIAVAFAL 664
GD SHPQ ++ +L++L ++ +GYVP T+FVL D+E EQ E L HSEK+A+AF L
Sbjct: 513 GDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGL 572
Query: 665 ISIPNPKPIRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGTCSCNDYW 722
+++P K IRI KNLR+CGDCH K SK+ R IV+RD R+HH +DG CSC DYW
Sbjct: 573 MTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 103/307 (33%), Positives = 168/307 (54%), Gaps = 12/307 (3%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
+R+++SW +M+S ++ + +AL + ML PN Y +++ LR+C+ S R+
Sbjct: 124 QRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNG---MSDVRM 180
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
+ ++K G +S V V LID+F K G+ E A VF++M + + WN ++ FAQ
Sbjct: 181 LHCGIIKEG-LESDVFVRSALIDVFAK-LGEPEDALSVFDEMVTGDAIVWNSIIGGFAQN 238
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVG 183
+ +++LF RM +G+ ++ TLTS L AC L LL +G Q H +++ DL +
Sbjct: 239 SRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD--QDLILN 296
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQ 243
+LVDMY KC GSL D+ RVFN M E +V++W+ +I+G + +G QEA++LF M
Sbjct: 297 NALVDMYCKC---GSLEDALRVFNQMKERDVITWSTMISGLAQ-NGYSQEALKLFERMKS 352
Query: 244 GNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKL-GLSAVNCVANSLINMYARSGRLE 302
PN T VL AC++ G KL G+ V +I++ ++G+L+
Sbjct: 353 SGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLD 412
Query: 303 CARKCFD 309
A K +
Sbjct: 413 DAVKLLN 419
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 198/405 (48%), Gaps = 27/405 (6%)
Query: 31 LDMLE-HGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVLKTGYFDSH------VSVGCE 83
+D L+ HG + + ++ ++ C ++ G ++ + YF+ H V+V
Sbjct: 49 MDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHL----YFNGHRPMMFLVNV--- 101
Query: 84 LIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTP 143
LI+M+VK + AH++F++M +RNV++W M++ +++ + +++L ML P
Sbjct: 102 LINMYVK-FNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRP 160
Query: 144 DRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSR 203
+ +T +S L +C +S + LH +I+ GL D+ V +L+D++AK G D+
Sbjct: 161 NVYTYSSVLRSCNG---MSDVRMLHCGIIKEGLESDVFVRSALIDVFAKL---GEPEDAL 214
Query: 204 RVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANL 263
VF+ M + + W ++I G+ + S + A+ LF M + T +SVL+AC L
Sbjct: 215 SVFDEMVTGDAIVWNSIIGGFAQNS-RSDVALELFKRMKRAGFIAEQATLTSVLRACTGL 273
Query: 264 PDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIV 323
G Q H +K + + N+L++MY + G LE A + F+ + E+ +++ T++
Sbjct: 274 ALLELGMQAHVHIVKYDQDLI--LNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMI 331
Query: 324 DVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGAACIGTIGKG-EQIHALVVKSGF 381
+ ++ S E L E ++G T +L + G + G ++ G
Sbjct: 332 SGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGI 391
Query: 382 ETNLSINNALISMYSKCGNKEAALQVFNDMG-DRNVITWTSIISG 425
+ +I + K G + A+++ N+M + + +TW +++
Sbjct: 392 DPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 111/224 (49%), Gaps = 17/224 (7%)
Query: 6 DLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVF 65
D + W S++ FA NS AL F M GF + T+ LRAC+ +G
Sbjct: 224 DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAH 283
Query: 66 GSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGY 125
++K +D + + L+DM+ K CG +E A RVF +M+ER+V+TW+ M++ AQ GY
Sbjct: 284 VHIVK---YDQDLILNNALVDMYCK-CGSLEDALRVFNQMKERDVITWSTMISGLAQNGY 339
Query: 126 PEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCS 185
++++ LF RM SG P+ T+ L AC+ LL G + RS L G
Sbjct: 340 SQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDG----WYYFRSMKKL---YGID 392
Query: 186 LVDMYAKCAVD-----GSLVDSRRVFNSMP-EHNVVSWTALIAG 223
V + C +D G L D+ ++ N M E + V+W L+
Sbjct: 393 PVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 462 bits (1190), Expect = e-130, Method: Compositional matrix adjust.
Identities = 243/696 (34%), Positives = 374/696 (53%), Gaps = 75/696 (10%)
Query: 98 AHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAE 157
A V + + + + +++ ++ + SI +F RM G PD L + CAE
Sbjct: 69 ADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAE 128
Query: 158 LELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMP------- 210
L VGKQ+H SGL +D V S+ MY +C G + D+R+VF+ M
Sbjct: 129 LSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRC---GRMGDARKVFDRMSDKDVVTC 185
Query: 211 ----------------------------EHNVVSWTALIAGYVRGSGQEQEAMRLFCDML 242
E N+VSW +++G+ R SG +EA+ +F +
Sbjct: 186 SALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNR-SGYHKEAVVMFQKIH 244
Query: 243 QGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRL- 301
P+ T SSVL + + G +H IK GL CV +++I+MY +SG +
Sbjct: 245 HLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVY 304
Query: 302 ------------------------------ECARKCFDLLFEKSL----VSCETIVDVIV 327
+ A + F+L E+++ VS +I+
Sbjct: 305 GIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCA 364
Query: 328 RDLNSDETLNHETE-HTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLS 386
++ E L E G+ T +L I +G G H V+ N+
Sbjct: 365 QNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVH 424
Query: 387 INNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETG 446
+ +ALI MY+KCG + VFN M +N++ W S+++GF+ HG A + + +F ++ T
Sbjct: 425 VGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTR 484
Query: 447 VKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEA 506
+KP+ +++ ++LSAC VGL DEGWK+F M +G+ PR+EHY+CMV++LGR+G L EA
Sbjct: 485 LKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEA 544
Query: 507 IEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATE 566
+ I MP + D+ VW +LL SCR+ N +L E AA+ + EP +P TY+LLSN+YA +
Sbjct: 545 YDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAK 604
Query: 567 ERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELDELASKI 626
W +V +IR M+ + K G SWI+V+N+V+ GD SHPQ +I +++DE++ ++
Sbjct: 605 GMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEM 664
Query: 627 KKLGYVPNTDFVLHDVEDEQKEQYLFQHSEKIAVAFALISIPNPKPIRIFKNLRVCGDCH 686
+K G+ PN DF LHDVE++++EQ L+ HSEK+AV F L++ P+ P+++ KNLR+CGDCH
Sbjct: 665 RKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCH 724
Query: 687 TAIKYISKVTGRVIVVRDANRFHHIKDGTCSCNDYW 722
IK+IS GR I +RD NRFHH KDG CSC D+W
Sbjct: 725 AVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 108/474 (22%), Positives = 213/474 (44%), Gaps = 72/474 (15%)
Query: 7 LVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFG 66
+ S+ S++ + +++ F M HG P+ + + C+ F VG+ +
Sbjct: 81 IYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHC 140
Query: 67 SVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVT-------------- 112
+G D V + M+++ CG + A +VF++M +++VVT
Sbjct: 141 VSCVSG-LDMDAFVQGSMFHMYMR-CGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCL 198
Query: 113 ---------------------WNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSA 151
WN +++ F + GY ++++ +F ++ G+ PD+ T++S
Sbjct: 199 EEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSV 258
Query: 152 LTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCA----------------- 194
L + + E+L++G+ +H +VI+ GL D CV +++DMY K
Sbjct: 259 LPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEA 318
Query: 195 ---------------VDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFC 239
VD +L E NVVSWT++IAG + +G++ EA+ LF
Sbjct: 319 GVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQ-NGKDIEALELFR 377
Query: 240 DMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSG 299
+M V PN T S+L AC N+ G G H +++ L V ++LI+MYA+ G
Sbjct: 378 EMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCG 437
Query: 300 RLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLS 358
R+ ++ F+++ K+LV ++++ + E ++ E+ T + ++ LLS
Sbjct: 438 RINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLS 497
Query: 359 GAACIGTIGKGEQIHALVVKS-GFETNLSINNALISMYSKCGNKEAALQVFNDM 411
+G +G + ++ + G + L + ++++ + G + A + +M
Sbjct: 498 ACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEM 551
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 171/351 (48%), Gaps = 51/351 (14%)
Query: 2 GSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVG 61
G + ++VSW ++S F + EA+V F + GF P++ ++ L + +S ++G
Sbjct: 212 GIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMG 271
Query: 62 RVVFGSVLKTGYFDSHVSVGCELIDMFVKGC----------------------------- 92
R++ G V+K G + +IDM+ K
Sbjct: 272 RLIHGYVIKQGLLKDKCVISA-MIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSR 330
Query: 93 -GDIESAHRVFEKMQER----NVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFT 147
G ++ A +FE +E+ NVV+W ++ AQ G ++++LF M ++G P+ T
Sbjct: 331 NGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVT 390
Query: 148 LTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFN 207
+ S L AC + L G+ H + +R L ++ VG +L+DMYAKC G + S+ VFN
Sbjct: 391 IPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKC---GRINLSQIVFN 447
Query: 208 SMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACAN--LPD 265
MP N+V W +L+ G+ G+ +E M +F +++ + P+ +F+S+L AC L D
Sbjct: 448 MMPTKNLVCWNSLMNGFSM-HGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTD 506
Query: 266 FG---FGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFE 313
G F IK L +C ++N+ R+G+L+ A +DL+ E
Sbjct: 507 EGWKYFKMMSEEYGIKPRLEHYSC----MVNLLGRAGKLQEA---YDLIKE 550
Score = 132 bits (332), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 112/450 (24%), Positives = 191/450 (42%), Gaps = 93/450 (20%)
Query: 166 QLHSWVIRSGLALDLCVGCSLVDMYAK--CAVDGSLVDSRRVFNSMPEHNVVSWTALIAG 223
Q H+ +++SG D + L+ Y+ C D LV S+P+ + S+++LI
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLV-----LQSIPDPTIYSFSSLIYA 90
Query: 224 YVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSA 283
+ Q ++ +F M + P+ ++ K CA L F G+Q+H + GL
Sbjct: 91 LTKAKLFTQ-SIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDM 149
Query: 284 VNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETE-H 342
V S+ +MY R GR+ ARK FD + +K +V+C ++ R +E + +E
Sbjct: 150 DAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEME 209
Query: 343 TTGIGACSFTYACLLSG-----------------------------AACIGTIGKGEQ-- 371
++GI A ++ +LSG ++ + ++G E
Sbjct: 210 SSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLN 269
Query: 372 ----IHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMG--------------- 412
IH V+K G + + +A+I MY K G+ + +FN
Sbjct: 270 MGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLS 329
Query: 413 --------------------DRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDV 452
+ NV++WTSII+G A++G +ALELF EM GVKPN V
Sbjct: 330 RNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHV 389
Query: 453 TYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHY------ACMVDVLGRSGLLSEA 506
T ++L AC ++ + G R HG RV + ++D+ + G ++ +
Sbjct: 390 TIPSMLPACGNIAALGHG-------RSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLS 442
Query: 507 IEFINSMPLDADAMVWRSLLGSCRVHGNTE 536
N MP + + W SL+ +HG +
Sbjct: 443 QIVFNMMP-TKNLVCWNSLMNGFSMHGKAK 471
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 459 bits (1182), Expect = e-129, Method: Compositional matrix adjust.
Identities = 252/681 (37%), Positives = 402/681 (59%), Gaps = 13/681 (1%)
Query: 45 FTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEK 104
F+ LR C + S + + +LK+G F + +S G +L+D +K CGDI+ A +VF+
Sbjct: 68 FSQLLRQCIDERSISGIKTIQAHMLKSG-FPAEIS-GSKLVDASLK-CGDIDYARQVFDG 124
Query: 105 MQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVG 164
M ER++VTWN ++ + +++++++ M+ + PD +TL+S A ++L L
Sbjct: 125 MSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEA 184
Query: 165 KQLHSWVIRSGLAL-DLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAG 223
++ H + GL + ++ VG +LVDMY K G +++ V + + E +VV TALI G
Sbjct: 185 QRSHGLAVILGLEVSNVFVGSALVDMYVKF---GKTREAKLVLDRVEEKDVVLITALIVG 241
Query: 224 YVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSA 283
Y + G++ EA++ F ML V PN +T++SVL +C NL D G G+ +H +K G +
Sbjct: 242 YSQ-KGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFES 300
Query: 284 VNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETL-NHETEH 342
SL+ MY R ++ + + F + + VS +++ +V++ + L
Sbjct: 301 ALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMM 360
Query: 343 TTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKE 402
I SFT + L G + + +G QIH +V K GF+ + + LI +Y KCG +
Sbjct: 361 RDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSD 420
Query: 403 AALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACS 462
A VF+ + + +VI+ ++I +A++G+ +AL+LF M+ G++PNDVT ++VL AC+
Sbjct: 421 MARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACN 480
Query: 463 HVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVW 522
+ L++EG + F+S R ++ +HYACMVD+LGR+G L EA E + + ++ D ++W
Sbjct: 481 NSRLVEEGCELFDSFRK-DKIMLTNDHYACMVDLLGRAGRLEEA-EMLTTEVINPDLVLW 538
Query: 523 RSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQK 582
R+LL +C+VH E+ E + ILE EP D T IL+SNLYA+ +W V ++ MK
Sbjct: 539 RTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDM 598
Query: 583 KIIKEAGYSWIEVENQVHKFHVGDT-SHPQAQKIYDELDELASKIKKLGYVPNTDFVLHD 641
K+ K SW+E+ + H F GD SHP +++I + L+EL K K LGYV + V D
Sbjct: 599 KLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCVFQD 658
Query: 642 VEDEQKEQYLFQHSEKIAVAFALISIPNPKPIRIFKNLRVCGDCHTAIKYISKVTGRVIV 701
+E+ KE+ L QHSEK+A+AFA+ IRI KNLRVC DCH+ IK +S+V R I+
Sbjct: 659 MEETAKERSLHQHSEKLAIAFAVWRNVGG-SIRILKNLRVCVDCHSWIKIVSRVMKREII 717
Query: 702 VRDANRFHHIKDGTCSCNDYW 722
RD+ RFHH +DG+CSC DYW
Sbjct: 718 CRDSKRFHHFRDGSCSCGDYW 738
Score = 172 bits (435), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/458 (25%), Positives = 223/458 (48%), Gaps = 8/458 (1%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR 62
S+R +V+W S+++ + EA+ + M+ + P+EY ++ +A S+ +
Sbjct: 126 SERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQ 185
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
G + G S+V VG L+DM+VK G A V ++++E++VV ++ ++Q
Sbjct: 186 RSHGLAVILGLEVSNVFVGSALVDMYVK-FGKTREAKLVLDRVEEKDVVLITALIVGYSQ 244
Query: 123 MGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCV 182
G +++ F ML+ P+ +T S L +C L+ + GK +H +++SG L
Sbjct: 245 KGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALAS 304
Query: 183 GCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDML 242
SL+ MY +C++ + DS RVF + N VSWT+LI+G V+ +G+E+ A+ F M+
Sbjct: 305 QTSLLTMYLRCSL---VDDSLRVFKCIEYPNQVSWTSLISGLVQ-NGREEMALIEFRKMM 360
Query: 243 QGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLE 302
+ ++ PN FT SS L+ C+NL F G Q+H K G + LI++Y + G +
Sbjct: 361 RDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSD 420
Query: 303 CARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGAA 361
AR FD L E ++S T++ ++ E L+ E G+ T +L
Sbjct: 421 MARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACN 480
Query: 362 CIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTS 421
+ +G ++ K ++ + + G E A + ++ + +++ W +
Sbjct: 481 NSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRT 540
Query: 422 IISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLS 459
++S H A + ++LE ++P D + ++S
Sbjct: 541 LLSACKVHRKVEMAERITRKILE--IEPGDEGTLILMS 576
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 459 bits (1182), Expect = e-129, Method: Compositional matrix adjust.
Identities = 246/648 (37%), Positives = 386/648 (59%), Gaps = 53/648 (8%)
Query: 91 GCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLF----------FRMLLSG 140
GC ++ A VF++M E+N V+WN +++ + Q E++ LF + LL G
Sbjct: 171 GC--VDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGG 228
Query: 141 YTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLV 200
+ + +++ + S +R D+ +++ YA+ G +
Sbjct: 229 FVKKK-------------KIVEARQFFDSMNVR-----DVVSWNTIITGYAQ---SGKID 267
Query: 201 DSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGN-VAPNGFTFSSVLKA 259
++R++F+ P +V +WTA+++GY++ E EA LF M + N V+ N
Sbjct: 268 EARQLFDESPVQDVFTWTAMVSGYIQNRMVE-EARELFDKMPERNEVSWN---------- 316
Query: 260 CANLPDFGFGEQLHSQTIKLGLSAVNCVA--NSLINMYARSGRLECARKCFDLLFEKSLV 317
A L + GE++ + V+ N++I YA+ G++ A+ FD + ++ V
Sbjct: 317 -AMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPV 375
Query: 318 SCETIVDVIVRDLNSDETLNH--ETEHTTG-IGACSFTYACLLSGAACIGTIGKGEQIHA 374
S ++ + +S E L + E G + SF+ A LS A + + G+Q+H
Sbjct: 376 SWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSA--LSTCADVVALELGKQLHG 433
Query: 375 LVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATK 434
+VK G+ET + NAL+ MY KCG+ E A +F +M +++++W ++I+G+++HG+
Sbjct: 434 RLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEV 493
Query: 435 ALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMV 494
AL F M G+KP+D T +AVLSACSH GL+D+G ++F +M +GV+P +HYACMV
Sbjct: 494 ALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMV 553
Query: 495 DVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPA 554
D+LGR+GLL +A + +MP + DA +W +LLG+ RVHGNTEL E AA I EP +
Sbjct: 554 DLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSG 613
Query: 555 TYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQK 614
Y+LLSNLYA+ RW DV +R M+ K + K GYSWIE++N+ H F VGD HP+ +
Sbjct: 614 MYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDE 673
Query: 615 IYDELDELASKIKKLGYVPNTDFVLHDVEDEQKEQYLFQHSEKIAVAFALISIPNPKPIR 674
I+ L+EL ++KK GYV T VLHDVE+E+KE+ + HSE++AVA+ ++ + + +PIR
Sbjct: 674 IFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIR 733
Query: 675 IFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGTCSCNDYW 722
+ KNLRVC DCH AIKY++++TGR+I++RD NRFHH KDG+CSC DYW
Sbjct: 734 VIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 122/453 (26%), Positives = 202/453 (44%), Gaps = 40/453 (8%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
+RD+ SW +M+S +A N +A F M E N+ + A L A + +
Sbjct: 154 ERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEK----NDVSWNALLSAYVQNSKMEEACM 209
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
+F S VS C L+ FVK +E A + F+ M R+VV+WN ++T +AQ
Sbjct: 210 LFKSRENWAL----VSWNC-LLGGFVKKKKIVE-ARQFFDSMNVRDVVSWNTIITGYAQS 263
Query: 124 GYPEDSIDLF----------FRMLLSGYTPDRFTLTSA--LTACAELELLSVGKQLHSWV 171
G +++ LF + ++SGY +R + E +S L +V
Sbjct: 264 GKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYV 323
Query: 172 I--RSGLALDL-----CVGCS----LVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTAL 220
R +A +L C S ++ YA+C G + +++ +F+ MP+ + VSW A+
Sbjct: 324 QGERMEMAKELFDVMPCRNVSTWNTMITGYAQC---GKISEAKNLFDKMPKRDPVSWAAM 380
Query: 221 IAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLG 280
IAGY + SG EA+RLF M + N +FSS L CA++ G+QLH + +K G
Sbjct: 381 IAGYSQ-SGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGG 439
Query: 281 LSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN-HE 339
V N+L+ MY + G +E A F + K +VS T++ R + L E
Sbjct: 440 YETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFE 499
Query: 340 TEHTTGIGACSFTYACLLSGAACIGTIGKGEQ-IHALVVKSGFETNLSINNALISMYSKC 398
+ G+ T +LS + G + KG Q + + G N ++ + +
Sbjct: 500 SMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRA 559
Query: 399 GNKEAALQVFNDMG-DRNVITWTSIISGFAKHG 430
G E A + +M + + W +++ HG
Sbjct: 560 GLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHG 592
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 113/491 (23%), Positives = 215/491 (43%), Gaps = 99/491 (20%)
Query: 93 GDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSAL 152
G+ E A ++F++M ER++V+WN+M+ + + + +LF M P+R
Sbjct: 109 GEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIM------PER------- 155
Query: 153 TACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH 212
D+C +++ YA+ +G + D+R VF+ MPE
Sbjct: 156 --------------------------DVCSWNTMLSGYAQ---NGCVDDARSVFDRMPEK 186
Query: 213 NVVSWTALIAGYVRGSGQEQEAM----RLFCDMLQGNVAPNGFTFSSVLKACANLPDFGF 268
N VSW AL++ YV+ S E+ M R ++ N GF + D
Sbjct: 187 NDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFD--- 243
Query: 269 GEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVR 328
S ++ +S N++I YA+SG+++ AR+ FD + + + +V ++
Sbjct: 244 -----SMNVRDVVS-----WNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQ 293
Query: 329 DL---NSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFET-- 383
+ + E + E ++ +L+G +GE++ + K F+
Sbjct: 294 NRMVEEARELFDKMPERN------EVSWNAMLAGYV------QGERME--MAKELFDVMP 339
Query: 384 --NLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYE 441
N+S N +I+ Y++CG A +F+ M R+ ++W ++I+G+++ G++ +AL LF +
Sbjct: 340 CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQ 399
Query: 442 MLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHG-VVPRVEHYACMVD----- 495
M G + N ++ + LS C+ V ++ G + HG +V C V
Sbjct: 400 MEREGGRLNRSSFSSALSTCADVVALELG-------KQLHGRLVKGGYETGCFVGNALLL 452
Query: 496 VLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMI--LEREPHDP 553
+ + G + EA + M D + W +++ HG GE A + ++RE P
Sbjct: 453 MYCKCGSIEEANDLFKEMA-GKDIVSWNTMIAGYSRHG---FGEVALRFFESMKREGLKP 508
Query: 554 ATYILLSNLYA 564
+++ L A
Sbjct: 509 DDATMVAVLSA 519
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 128/241 (53%), Gaps = 10/241 (4%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
KRD VSW +M++ ++ + EAL F+ M G N F++AL C++ + +G+
Sbjct: 371 KRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQ 430
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
+ G ++K GY ++ VG L+ M+ K CG IE A+ +F++M +++V+WN M+ +++
Sbjct: 431 LHGRLVKGGY-ETGCFVGNALLLMYCK-CGSIEEANDLFKEMAGKDIVSWNTMIAGYSRH 488
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQ-LHSWVIRSGLALDLCV 182
G+ E ++ F M G PD T+ + L+AC+ L+ G+Q ++ G+ +
Sbjct: 489 GFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQH 548
Query: 183 GCSLVDMYAKCAVDGSLVDSRRVFNSMP-EHNVVSWTALI-AGYVRGSGQ--EQEAMRLF 238
+VD+ + G L D+ + +MP E + W L+ A V G+ + E A ++F
Sbjct: 549 YACMVDLLGRA---GLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIF 605
Query: 239 C 239
Sbjct: 606 A 606
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 168/342 (49%), Gaps = 32/342 (9%)
Query: 197 GSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSV 256
G ++ RVF MP + VS+ +I+GY+R +G+ + A +LF +M + ++ +++ +
Sbjct: 78 GRCNEALRVFKRMPRWSSVSYNGMISGYLR-NGEFELARKLFDEMPERDLV----SWNVM 132
Query: 257 LKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSL 316
+K + G +L + + C N++++ YA++G ++ AR FD + EK+
Sbjct: 133 IKGYVRNRNLGKARELFEIMPERDV----CSWNTMLSGYAQNGCVDDARSVFDRMPEKND 188
Query: 317 VSCETIVDVIVRDLNSDET--LNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQI-H 373
VS ++ V++ +E L E+ + ++ CLL G I + Q
Sbjct: 189 VSWNALLSAYVQNSKMEEACMLFKSRENWALV-----SWNCLLGGFVKKKKIVEARQFFD 243
Query: 374 ALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYAT 433
++ V+ ++ N +I+ Y++ G + A Q+F++ ++V TWT+++SG+ ++
Sbjct: 244 SMNVR-----DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVE 298
Query: 434 KALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACM 493
+A ELF +M E N+V++ A+L+ ++ + F+ M C V + M
Sbjct: 299 EARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVM-PCRN----VSTWNTM 349
Query: 494 VDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNT 535
+ + G +SEA + MP D + W +++ G++
Sbjct: 350 ITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAGYSQSGHS 390
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 459 bits (1181), Expect = e-129, Method: Compositional matrix adjust.
Identities = 255/701 (36%), Positives = 389/701 (55%), Gaps = 75/701 (10%)
Query: 93 GDIESAHRVFEKMQ--ERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTS 150
GDI A VFEK R+ V +N M+T F+ +I+LF +M G+ PD FT S
Sbjct: 94 GDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFAS 153
Query: 151 ALTACAELELLSVGK----QLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDS-RRV 205
L A L L++ + Q H+ ++SG V +LV +Y+KCA SL+ S R+V
Sbjct: 154 VL---AGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKV 210
Query: 206 FNSMPEHNVVSWTALIAGYVRGS----GQE---------------------------QEA 234
F+ + E + SWT ++ GYV+ G+E QEA
Sbjct: 211 FDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEA 270
Query: 235 MRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINM 294
+ + M+ + + FT+ SV++ACA G+Q+H+ ++ + + NSL+++
Sbjct: 271 LEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFH-FDNSLVSL 329
Query: 295 YARSGRLECARKCFDLLFEKSLVSCETIVD------------VIVRDLNSDETLN----- 337
Y + G+ + AR F+ + K LVS ++ +I +++ L+
Sbjct: 330 YYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMI 389
Query: 338 ---------------HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFE 382
G C + ++ + A +G G+Q HA ++K GF+
Sbjct: 390 SGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFD 449
Query: 383 TNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEM 442
++LS NALI+MY+KCG E A QVF M + ++W ++I+ +HG+ +A++++ EM
Sbjct: 450 SSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEM 509
Query: 443 LETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGL 502
L+ G++P+ +T + VL+ACSH GL+D+G K+F+SM + + P +HYA ++D+L RSG
Sbjct: 510 LKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGK 569
Query: 503 LSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNL 562
S+A I S+P A +W +LL CRVHGN ELG AA + P TY+LLSN+
Sbjct: 570 FSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNM 629
Query: 563 YATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELDEL 622
+A +W +VA +RK M+ + + KE SWIE+E QVH F V DTSHP+A+ +Y L +L
Sbjct: 630 HAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDL 689
Query: 623 ASKIKKLGYVPNTDFVLHDVE-DEQKEQYLFQHSEKIAVAFALISIPNPKPIRIFKNLRV 681
++++LGYVP+T FVLHDVE D KE L HSEKIAVAF L+ +P IRIFKNLR
Sbjct: 690 GKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRT 749
Query: 682 CGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGTCSCNDYW 722
CGDCH +++S V R I++RD RFHH ++G CSC ++W
Sbjct: 750 CGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 130/503 (25%), Positives = 217/503 (43%), Gaps = 90/503 (17%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
RD V + +M++ F++N+ + A+ F M GF P+ + F + L + V
Sbjct: 111 RDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQ 170
Query: 65 F-GSVLKTG--YFDSHVSVGCELIDMFVKGCGD---IESAHRVFEKMQERNVVTWNLMMT 118
F + LK+G Y SV L+ ++ K + SA +VF+++ E++ +W MMT
Sbjct: 171 FHAAALKSGAGYI---TSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMT 227
Query: 119 RFAQMGY--------------------------------PEDSIDLFFRMLLSGYTPDRF 146
+ + GY ++++++ RM+ SG D F
Sbjct: 228 GYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEF 287
Query: 147 TLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVF 206
T S + ACA LL +GKQ+H++V+R SLV +Y KC G ++R +F
Sbjct: 288 TYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKC---GKFDEARAIF 343
Query: 207 NSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNV----------APNGF----- 251
MP ++VSW AL++GYV SG EA +F +M + N+ A NGF
Sbjct: 344 EKMPAKDLVSWNALLSGYV-SSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGL 402
Query: 252 ----------------TFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMY 295
FS +K+CA L + G+Q H+Q +K+G + N+LI MY
Sbjct: 403 KLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMY 462
Query: 296 ARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYA 354
A+ G +E AR+ F + VS ++ + + + E ++ +E GI T
Sbjct: 463 AKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLL 522
Query: 355 CLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNA------LISMYSKCGNKEAALQVF 408
+L+ + G + +G + ET I LI + + G A V
Sbjct: 523 TVLTACSHAGLVDQGRKYF-----DSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVI 577
Query: 409 NDMGDRNVI-TWTSIISGFAKHG 430
+ + W +++SG HG
Sbjct: 578 ESLPFKPTAEIWEALLSGCRVHG 600
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 162/344 (47%), Gaps = 41/344 (11%)
Query: 1 MGSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSV 60
M LV++ +M+S + N EAL M+ G +E+ + + +RAC+ + +
Sbjct: 245 MDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQL 304
Query: 61 GRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKM--------------- 105
G+ V VL+ F H L+ ++ K CG + A +FEKM
Sbjct: 305 GKQVHAYVLRREDFSFHFD--NSLVSLYYK-CGKFDEARAIFEKMPAKDLVSWNALLSGY 361
Query: 106 ----------------QERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLT 149
+E+N+++W +M++ A+ G+ E+ + LF M G+ P + +
Sbjct: 362 VSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFS 421
Query: 150 SALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSM 209
A+ +CA L G+Q H+ +++ G L G +L+ MYAKC V + ++R+VF +M
Sbjct: 422 GAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGV---VEEARQVFRTM 478
Query: 210 PEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKAC--ANLPDFG 267
P + VSW ALIA + G EA+ ++ +ML+ + P+ T +VL AC A L D G
Sbjct: 479 PCLDSVSWNALIAALGQ-HGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQG 537
Query: 268 FGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLL 311
+T+ + A LI++ RSG+ A + L
Sbjct: 538 RKYFDSMETVYRIPPGADHYAR-LIDLLCRSGKFSDAESVIESL 580
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 457 bits (1177), Expect = e-129, Method: Compositional matrix adjust.
Identities = 250/716 (34%), Positives = 404/716 (56%), Gaps = 42/716 (5%)
Query: 39 YPNEYCFTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESA 98
YP + + + A + + R VF + + F + L+ + K G I
Sbjct: 38 YPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWN-----NLLLAYSK-AGLISEM 91
Query: 99 HRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLS-GYTPDRFTLTSALTACAE 157
FEK+ +R+ VTWN+++ ++ G ++ + M+ R TL + L +
Sbjct: 92 ESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSS 151
Query: 158 LELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVV-- 215
+S+GKQ+H VI+ G L VG L+ MYA G + D+++VF + + N V
Sbjct: 152 NGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANV---GCISDAKKVFYGLDDRNTVMY 208
Query: 216 ----------------------------SWTALIAGYVRGSGQEQEAMRLFCDMLQGNVA 247
SW A+I G + +G +EA+ F +M +
Sbjct: 209 NSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQ-NGLAKEAIECFREMKVQGLK 267
Query: 248 PNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKC 307
+ + F SVL AC L G+Q+H+ I+ V ++LI+MY + L A+
Sbjct: 268 MDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTV 327
Query: 308 FDLLFEKSLVSCETIVDVIVRDLNSDETLNHETE-HTTGIGACSFTYACLLSGAACIGTI 366
FD + +K++VS +V + ++E + + +GI +T +S A + ++
Sbjct: 328 FDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSL 387
Query: 367 GKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGF 426
+G Q H + SG ++++N+L+++Y KCG+ + + ++FN+M R+ ++WT+++S +
Sbjct: 388 EEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAY 447
Query: 427 AKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPR 486
A+ G A + ++LF +M++ G+KP+ VT V+SACS GL+++G ++F M +G+VP
Sbjct: 448 AQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPS 507
Query: 487 VEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMIL 546
+ HY+CM+D+ RSG L EA+ FIN MP DA+ W +LL +CR GN E+G+ AA+ ++
Sbjct: 508 IGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLI 567
Query: 547 EREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGD 606
E +PH PA Y LLS++YA++ +W VA +R+ M++K + KE G SWI+ + ++H F D
Sbjct: 568 ELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADD 627
Query: 607 TSHPQAQKIYDELDELASKIKKLGYVPNTDFVLHDVEDEQKEQYLFQHSEKIAVAFALIS 666
S P +IY +L+EL +KI GY P+T FV HDVE+ K + L HSE++A+AF LI
Sbjct: 628 ESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIF 687
Query: 667 IPNPKPIRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGTCSCNDYW 722
+P+ +PIR+ KNLRVC DCH A K+IS VTGR I+VRDA RFH KDGTCSC D+W
Sbjct: 688 VPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 105/306 (34%), Positives = 170/306 (55%), Gaps = 7/306 (2%)
Query: 2 GSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVG 61
G ++D VSW +M+ A N + EA+ F +M G ++Y F + L AC + G
Sbjct: 230 GMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEG 289
Query: 62 RVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFA 121
+ + +++T + D H+ VG LIDM+ K C + A VF++M+++NVV+W M+ +
Sbjct: 290 KQIHACIIRTNFQD-HIYVGSALIDMYCK-CKCLHYAKTVFDRMKQKNVVSWTAMVVGYG 347
Query: 122 QMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLC 181
Q G E+++ +F M SG PD +TL A++ACA + L G Q H I SGL +
Sbjct: 348 QTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVT 407
Query: 182 VGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDM 241
V SLV +Y KC G + DS R+FN M + VSWTA+++ Y + G+ E ++LF M
Sbjct: 408 VSNSLVTLYGKC---GDIDDSTRLFNEMNVRDAVSWTAMVSAYAQ-FGRAVETIQLFDKM 463
Query: 242 LQGNVAPNGFTFSSVLKACANLPDFGFGEQLHS-QTIKLGLSAVNCVANSLINMYARSGR 300
+Q + P+G T + V+ AC+ G++ T + G+ + +I++++RSGR
Sbjct: 464 VQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGR 523
Query: 301 LECARK 306
LE A +
Sbjct: 524 LEEAMR 529
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 457 bits (1177), Expect = e-129, Method: Compositional matrix adjust.
Identities = 242/627 (38%), Positives = 367/627 (58%), Gaps = 10/627 (1%)
Query: 99 HRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAEL 158
HR F V+ L +++ G ++++ M + G + L AC +
Sbjct: 9 HRSFSSSPTNYVLQTILPISQLCSNGRLQEAL---LEMAMLGPEMGFHGYDALLNACLDK 65
Query: 159 ELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWT 218
L G+++H+ +I++ + L+ Y KC L D+R+V + MPE NVVSWT
Sbjct: 66 RALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKC---DCLEDARKVLDEMPEKNVVSWT 122
Query: 219 ALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIK 278
A+I+ Y + +G EA+ +F +M++ + PN FTF++VL +C G G+Q+H +K
Sbjct: 123 AMISRYSQ-TGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVK 181
Query: 279 LGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN- 337
+ V +SL++MYA++G+++ AR+ F+ L E+ +VSC I+ + +E L
Sbjct: 182 WNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEM 241
Query: 338 HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSK 397
H+ G+ TYA LL+ + + + G+Q H V++ + N+LI MYSK
Sbjct: 242 FHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSK 301
Query: 398 CGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEML-ETGVKPNDVTYIA 456
CGN A ++F++M +R I+W +++ G++KHG + LELF M E VKP+ VT +A
Sbjct: 302 CGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLA 361
Query: 457 VLSACSHVGLIDEGWKHFNSMRHC-HGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPL 515
VLS CSH + D G F+ M +G P EHY C+VD+LGR+G + EA EFI MP
Sbjct: 362 VLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPS 421
Query: 516 DADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAI 575
A V SLLG+CRVH + ++GE + ++E EP + Y++LSNLYA+ RW DV +
Sbjct: 422 KPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNV 481
Query: 576 RKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELDELASKIKKLGYVPNT 635
R M QK + KE G SWI+ E +H FH D +HP+ +++ ++ E++ K+K+ GYVP+
Sbjct: 482 RAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDL 541
Query: 636 DFVLHDVEDEQKEQYLFQHSEKIAVAFALISIPNPKPIRIFKNLRVCGDCHTAIKYISKV 695
VL+DV++EQKE+ L HSEK+A+ F LI+ PIR+FKNLR+C DCH K SKV
Sbjct: 542 SCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKV 601
Query: 696 TGRVIVVRDANRFHHIKDGTCSCNDYW 722
R + +RD NRFH I DG CSC DYW
Sbjct: 602 FEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 172 bits (437), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 105/309 (33%), Positives = 170/309 (55%), Gaps = 19/309 (6%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
++++VSW +M+S ++ EAL F +M+ PNE+ F L +C + +G+
Sbjct: 115 EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQ 174
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
+ G ++K Y DSH+ VG L+DM+ K G I+ A +FE + ER+VV+ ++ +AQ+
Sbjct: 175 IHGLIVKWNY-DSHIFVGSSLLDMYAKA-GQIKEAREIFECLPERDVVSCTAIIAGYAQL 232
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVG 183
G E+++++F R+ G +P+ T S LTA + L LL GKQ H V+R L +
Sbjct: 233 GLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQ 292
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVR-GSGQE-QEAMRLFCDM 241
SL+DMY+KC G+L +RR+F++MPE +SW A++ GY + G G+E E RL D
Sbjct: 293 NSLIDMYSKC---GNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRD- 348
Query: 242 LQGNVAPNGFTFSSVLKACAN--LPDFGF----GEQLHSQTIKLGLSAVNCVANSLINMY 295
+ V P+ T +VL C++ + D G G K G C+ ++M
Sbjct: 349 -EKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCI----VDML 403
Query: 296 ARSGRLECA 304
R+GR++ A
Sbjct: 404 GRAGRIDEA 412
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 102/307 (33%), Positives = 170/307 (55%), Gaps = 13/307 (4%)
Query: 14 MSCFANNSMEHEALVTFLDML--EHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVLKT 71
+S +N EAL+ + ML E GF+ + A L AC + G+ V ++KT
Sbjct: 27 ISQLCSNGRLQEALLE-MAMLGPEMGFHG----YDALLNACLDKRALRDGQRVHAHMIKT 81
Query: 72 GYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSID 131
Y + LI F C +E A +V ++M E+NVV+W M++R++Q G+ +++
Sbjct: 82 RYLPATYLRTRLLI--FYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALT 139
Query: 132 LFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYA 191
+F M+ S P+ FT + LT+C L +GKQ+H +++ + VG SL+DMYA
Sbjct: 140 VFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYA 199
Query: 192 KCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGF 251
K G + ++R +F +PE +VVS TA+IAGY + G ++EA+ +F + ++PN
Sbjct: 200 KA---GQIKEAREIFECLPERDVVSCTAIIAGYAQ-LGLDEEALEMFHRLHSEGMSPNYV 255
Query: 252 TFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLL 311
T++S+L A + L G+Q H ++ L + NSLI+MY++ G L AR+ FD +
Sbjct: 256 TYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNM 315
Query: 312 FEKSLVS 318
E++ +S
Sbjct: 316 PERTAIS 322
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 457 bits (1176), Expect = e-128, Method: Compositional matrix adjust.
Identities = 256/727 (35%), Positives = 399/727 (54%), Gaps = 14/727 (1%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEH----GFYPNEYCFTAALRACSNSLYFS 59
+R+LVSW SM+ F++N E+ + +M+E F P+ L C+
Sbjct: 250 ERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIG 309
Query: 60 VGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTR 119
+G+ V G +K D + + L+DM+ K CG I +A +F+ +NVV+WN M+
Sbjct: 310 LGKGVHGWAVKL-RLDKELVLNNALMDMYSK-CGCITNAQMIFKMNNNKNVVSWNTMVGG 367
Query: 120 FAQMGYPEDSIDLFFRMLLSG--YTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLA 177
F+ G + D+ +ML G D T+ +A+ C L K+LH + ++
Sbjct: 368 FSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFV 427
Query: 178 LDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRL 237
+ V + V YAKC GSL ++RVF+ + V SW ALI G+ + S + ++
Sbjct: 428 YNELVANAFVASYAKC---GSLSYAQRVFHGIRSKTVNSWNALIGGHAQ-SNDPRLSLDA 483
Query: 238 FCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYAR 297
M + P+ FT S+L AC+ L G+++H I+ L V S++++Y
Sbjct: 484 HLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIH 543
Query: 298 SGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTT-GIGACSFTYACL 356
G L + FD + +KSLVS T++ +++ D L + GI C + +
Sbjct: 544 CGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPV 603
Query: 357 LSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNV 416
+ + ++ G + HA +K E + I +LI MY+K G+ + +VFN + +++
Sbjct: 604 FGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKST 663
Query: 417 ITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNS 476
+W ++I G+ HG A +A++LF EM TG P+D+T++ VL+AC+H GLI EG ++ +
Sbjct: 664 ASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQ 723
Query: 477 MRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFI-NSMPLDADAMVWRSLLGSCRVHGNT 535
M+ G+ P ++HYAC++D+LGR+G L +A+ + M +AD +W+SLL SCR+H N
Sbjct: 724 MKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNL 783
Query: 536 ELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEV 595
E+GE A + E EP P Y+LLSNLYA +W DV +R+ M + + K+AG SWIE+
Sbjct: 784 EMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIEL 843
Query: 596 ENQVHKFHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTDFVLHDVEDEQKEQYLFQHS 655
+V F VG+ ++I L KI K+GY P+T V HD+ +E+K + L HS
Sbjct: 844 NRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHS 903
Query: 656 EKIAVAFALISIPNPKPIRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGT 715
EK+A+ + LI IR++KNLR+C DCH A K ISKV R IVVRD RFHH K+G
Sbjct: 904 EKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGV 963
Query: 716 CSCNDYW 722
CSC DYW
Sbjct: 964 CSCGDYW 970
Score = 210 bits (534), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 143/572 (25%), Positives = 290/572 (50%), Gaps = 25/572 (4%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEH-GFYPNEYCFTAALRACSNSLYFSVGRV 63
++L W +++S ++ N + E L TF++M+ P+ + + ++AC+ +G
Sbjct: 149 KNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLA 208
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
V G V+KTG + V VG L+ F G + A ++F+ M ERN+V+WN M+ F+
Sbjct: 209 VHGLVVKTGLVED-VFVGNALVS-FYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDN 266
Query: 124 GYPEDSIDLFFRMLL----SGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALD 179
G+ E+S L M+ + PD TL + L CA + +GK +H W ++ L +
Sbjct: 267 GFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKE 326
Query: 180 LCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFC 239
L + +L+DMY+KC G + +++ +F NVVSW ++ G+ G +
Sbjct: 327 LVLNNALMDMYSKC---GCITNAQMIFKMNNNKNVVSWNTMVGGF-SAEGDTHGTFDVLR 382
Query: 240 DMLQG--NVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYAR 297
ML G +V + T + + C + ++LH ++K VAN+ + YA+
Sbjct: 383 QMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAK 442
Query: 298 SGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACL 356
G L A++ F + K++ S ++ + + +L+ H +G+ SFT L
Sbjct: 443 CGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSL 502
Query: 357 LSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNV 416
LS + + ++ G+++H ++++ E +L + +++S+Y CG +F+ M D+++
Sbjct: 503 LSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSL 562
Query: 417 ITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWK-HFN 475
++W ++I+G+ ++G+ +AL +F +M+ G++ ++ + V ACS + + G + H
Sbjct: 563 VSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAY 622
Query: 476 SMRHCHGVVPRVEHYAC-MVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGN 534
+++H ++ AC ++D+ ++G ++++ + N + + A W +++ +HG
Sbjct: 623 ALKH---LLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTA-SWNAMIMGYGIHG- 677
Query: 535 TELGEHAAKMI--LEREPHDPATYILLSNLYA 564
L + A K+ ++R H+P L L A
Sbjct: 678 --LAKEAIKLFEEMQRTGHNPDDLTFLGVLTA 707
Score = 155 bits (393), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 205/415 (49%), Gaps = 19/415 (4%)
Query: 80 VGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRML-L 138
V C I CG + + VF+ ++ +N+ WN +++ +++ ++ ++ F M+
Sbjct: 121 VLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMIST 180
Query: 139 SGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGS 198
+ PD FT + ACA + + +G +H V+++GL D+ VG +LV Y G
Sbjct: 181 TDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFY---GTHGF 237
Query: 199 LVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQ----GNVAPNGFTFS 254
+ D+ ++F+ MPE N+VSW ++I + +G +E+ L +M++ G P+ T
Sbjct: 238 VTDALQLFDIMPERNLVSWNSMIRVF-SDNGFSEESFLLLGEMMEENGDGAFMPDVATLV 296
Query: 255 SVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEK 314
+VL CA + G G+ +H +KL L + N+L++MY++ G + A+ F + K
Sbjct: 297 TVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNK 356
Query: 315 SLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGA-ACI--GTIGKGEQ 371
++VS T+V + ++ T + + G +L+ C + ++
Sbjct: 357 NVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKE 416
Query: 372 IHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGY 431
+H +K F N + NA ++ Y+KCG+ A +VF+ + + V +W ++I G A+
Sbjct: 417 LHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSND 476
Query: 432 ATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPR 486
+L+ +M +G+ P+ T ++LSACS + + G + HG + R
Sbjct: 477 PRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLG-------KEVHGFIIR 524
Score = 146 bits (369), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 103/328 (31%), Positives = 168/328 (51%), Gaps = 13/328 (3%)
Query: 145 RFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCS-LVDMYAKCAVDGSLVDSR 203
R L L A + + + +G+++H V S + V C+ ++ MYA C GS DSR
Sbjct: 84 REALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMC---GSPDDSR 140
Query: 204 RVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQG-NVAPNGFTFSSVLKACAN 262
VF+++ N+ W A+I+ Y R + E + F +M+ ++ P+ FT+ V+KACA
Sbjct: 141 FVFDALRSKNLFQWNAVISSYSRNELYD-EVLETFIEMISTTDLLPDHFTYPCVIKACAG 199
Query: 263 LPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETI 322
+ D G G +H +K GL V N+L++ Y G + A + FD++ E++LVS ++
Sbjct: 200 MSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSM 259
Query: 323 VDVIVRDLNSDET--LNHETEHTTGIGACSFTYACL---LSGAACIGTIGKGEQIHALVV 377
+ V + S+E+ L E G GA A L L A IG G+ +H V
Sbjct: 260 IRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAV 319
Query: 378 KSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALE 437
K + L +NNAL+ MYSKCG A +F ++NV++W +++ GF+ G +
Sbjct: 320 KLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFD 379
Query: 438 LFYEMLETG--VKPNDVTYIAVLSACSH 463
+ +ML G VK ++VT + + C H
Sbjct: 380 VLRQMLAGGEDVKADEVTILNAVPVCFH 407
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 140/295 (47%), Gaps = 25/295 (8%)
Query: 256 VLKACANLPDFGFGEQLH---SQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLF 312
+L+A D G ++H S + +L V C +I MYA G + +R FD L
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCT--RIITMYAMCGSPDDSRFVFDALR 147
Query: 313 EKSLVSCETIVDVIVRDLNSDETLNHETE--HTTGIGACSFTYACLLSGAACIGTIGKGE 370
K+L ++ R+ DE L E TT + FTY C++ A + +G G
Sbjct: 148 SKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGL 207
Query: 371 QIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHG 430
+H LVVK+G ++ + NAL+S Y G ALQ+F+ M +RN+++W S+I F+ +G
Sbjct: 208 AVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNG 267
Query: 431 YATKALELFYEMLET----GVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHG--VV 484
++ ++ L EM+E P+ T + VL C+ I G + HG V
Sbjct: 268 FSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLG-------KGVHGWAVK 320
Query: 485 PRVEHYA----CMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNT 535
R++ ++D+ + G ++ A + I M + + + W +++G G+T
Sbjct: 321 LRLDKELVLNNALMDMYSKCGCITNA-QMIFKMNNNKNVVSWNTMVGGFSAEGDT 374
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 452 bits (1164), Expect = e-127, Method: Compositional matrix adjust.
Identities = 257/696 (36%), Positives = 396/696 (56%), Gaps = 39/696 (5%)
Query: 62 RVVFGSVLKTGYFDSHVSVGCELID--MFVKGCGDIESAHRVFEKMQERNVVTWNLMMTR 119
R++ ++K G +++ ++ +LI+ + + A VF+ +QE N++ WN M
Sbjct: 50 RIIHAQMIKIGLHNTNYALS-KLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRG 108
Query: 120 FAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALD 179
A P ++ L+ M+ G P+ +T L +CA+ + G+Q+H V++ G LD
Sbjct: 109 HALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLD 168
Query: 180 LCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYV-RG----------- 227
L V SL+ MY + +G L D+ +VF+ P +VVS+TALI GY RG
Sbjct: 169 LYVHTSLISMYVQ---NGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDE 225
Query: 228 ------------------SGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFG 269
+G +EA+ LF DM++ NV P+ T +V+ ACA G
Sbjct: 226 IPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELG 285
Query: 270 EQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVR- 328
Q+H G + + N+LI++Y++ G LE A F+ L K ++S T++
Sbjct: 286 RQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHM 345
Query: 329 DLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVK--SGFETNLS 386
+L + L + +G T +L A +G I G IH + K G S
Sbjct: 346 NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASS 405
Query: 387 INNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETG 446
+ +LI MY+KCG+ EAA QVFN + +++ +W ++I GFA HG A + +LF M + G
Sbjct: 406 LRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIG 465
Query: 447 VKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEA 506
++P+D+T++ +LSACSH G++D G F +M + + P++EHY CM+D+LG SGL EA
Sbjct: 466 IQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEA 525
Query: 507 IEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATE 566
E IN M ++ D ++W SLL +C++HGN ELGE A+ +++ EP +P +Y+LLSN+YA+
Sbjct: 526 EEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASA 585
Query: 567 ERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELDELASKI 626
RW +VA R + K + K G S IE+++ VH+F +GD HP+ ++IY L+E+ +
Sbjct: 586 GRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLL 645
Query: 627 KKLGYVPNTDFVLHDVEDEQKEQYLFQHSEKIAVAFALISIPNPKPIRIFKNLRVCGDCH 686
+K G+VP+T VL ++E+E KE L HSEK+A+AF LIS + I KNLRVC +CH
Sbjct: 646 EKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCH 705
Query: 687 TAIKYISKVTGRVIVVRDANRFHHIKDGTCSCNDYW 722
A K ISK+ R I+ RD RFHH +DG CSCNDYW
Sbjct: 706 EATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 195/401 (48%), Gaps = 40/401 (9%)
Query: 6 DLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVF 65
+L+ W +M A +S AL ++ M+ G PN Y F L++C+ S F G+ +
Sbjct: 98 NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIH 157
Query: 66 GSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQER----------------- 108
G VLK G D + V LI M+V+ G +E AH+VF+K R
Sbjct: 158 GHVLKLG-CDLDLYVHTSLISMYVQN-GRLEDAHKVFDKSPHRDVVSYTALIKGYASRGY 215
Query: 109 --------------NVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTA 154
+VV+WN M++ +A+ G +++++LF M+ + PD T+ + ++A
Sbjct: 216 IENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 275
Query: 155 CAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNV 214
CA+ + +G+Q+H W+ G +L + +L+D+Y+KC G L + +F +P +V
Sbjct: 276 CAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKC---GELETACGLFERLPYKDV 332
Query: 215 VSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHS 274
+SW LI GY +EA+ LF +ML+ PN T S+L ACA+L G +H
Sbjct: 333 ISWNTLIGGYTH-MNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHV 391
Query: 275 QTIKL--GLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNS 332
K G++ + + SLI+MYA+ G +E A + F+ + KSL S ++ +
Sbjct: 392 YIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRA 451
Query: 333 DETLN-HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQI 372
D + + GI T+ LLS + G + G I
Sbjct: 452 DASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 146/260 (56%), Gaps = 8/260 (3%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
+D+VSW +M+S +A EAL F DM++ P+E + AC+ S +GR V
Sbjct: 229 KDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQV 288
Query: 65 FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG 124
+ G F S++ + LID++ K CG++E+A +FE++ ++V++WN ++ + M
Sbjct: 289 HLWIDDHG-FGSNLKIVNALIDLYSK-CGELETACGLFERLPYKDVISWNTLIGGYTHMN 346
Query: 125 YPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIR--SGLALDLCV 182
++++ LF ML SG TP+ T+ S L ACA L + +G+ +H ++ + G+ +
Sbjct: 347 LYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSL 406
Query: 183 GCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDML 242
SL+DMYAKC G + + +VFNS+ ++ SW A+I G+ G+ + LF M
Sbjct: 407 RTSLIDMYAKC---GDIEAAHQVFNSILHKSLSSWNAMIFGFAM-HGRADASFDLFSRMR 462
Query: 243 QGNVAPNGFTFSSVLKACAN 262
+ + P+ TF +L AC++
Sbjct: 463 KIGIQPDDITFVGLLSACSH 482
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 448 bits (1152), Expect = e-126, Method: Compositional matrix adjust.
Identities = 230/626 (36%), Positives = 365/626 (58%), Gaps = 5/626 (0%)
Query: 98 AHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAE 157
++ +F Q N+ +N ++ F +++DLF + G FT L AC
Sbjct: 64 SYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTR 123
Query: 158 LELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSW 217
+G LHS V++ G D+ SL+ +Y+ G L D+ ++F+ +P+ +VV+W
Sbjct: 124 ASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSG---SGRLNDAHKLFDEIPDRSVVTW 180
Query: 218 TALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTI 277
TAL +GY SG+ +EA+ LF M++ V P+ + VL AC ++ D GE +
Sbjct: 181 TALFSGYTT-SGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYME 239
Query: 278 KLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN 337
++ + + V +L+N+YA+ G++E AR FD + EK +V+ T++ + E +
Sbjct: 240 EMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIE 299
Query: 338 HETEH-TTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYS 396
+ + F+ LS A +G + GE +L+ + F TNL + NALI MY+
Sbjct: 300 LFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYA 359
Query: 397 KCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIA 456
KCG +VF +M +++++ + ISG AK+G+ + +F + + G+ P+ T++
Sbjct: 360 KCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLG 419
Query: 457 VLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLD 516
+L C H GLI +G + FN++ + + VEHY CMVD+ GR+G+L +A I MP+
Sbjct: 420 LLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMR 479
Query: 517 ADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIR 576
+A+VW +LL CR+ +T+L E K ++ EP + Y+ LSN+Y+ RW + A +R
Sbjct: 480 PNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVR 539
Query: 577 KTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTD 636
M +K + K GYSWIE+E +VH+F D SHP + KIY +L++L ++++ +G+VP T+
Sbjct: 540 DMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTE 599
Query: 637 FVLHDVEDEQKEQYLFQHSEKIAVAFALISIPNPKPIRIFKNLRVCGDCHTAIKYISKVT 696
FV DVE+E+KE+ L HSEK+AVA LIS + + IR+ KNLRVCGDCH +K ISK+T
Sbjct: 600 FVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKIT 659
Query: 697 GRVIVVRDANRFHHIKDGTCSCNDYW 722
R IVVRD NRFH +G+CSCNDYW
Sbjct: 660 RREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/418 (27%), Positives = 212/418 (50%), Gaps = 11/418 (2%)
Query: 12 SMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVLKT 71
S+++ F NN + HE L FL + +HG Y + + F L+AC+ + +G + V+K
Sbjct: 81 SLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKC 140
Query: 72 GYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSID 131
G F+ V+ L+ ++ G G + AH++F+++ +R+VVTW + + + G ++ID
Sbjct: 141 G-FNHDVAAMTSLLSIY-SGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAID 198
Query: 132 LFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYA 191
LF +M+ G PD + + L+AC + L G+ + ++ + + V +LV++YA
Sbjct: 199 LFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYA 258
Query: 192 KCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGF 251
KC G + +R VF+SM E ++V+W+ +I GY S +E + LF MLQ N+ P+ F
Sbjct: 259 KC---GKMEKARSVFDSMVEKDIVTWSTMIQGYASNSF-PKEGIELFLQMLQENLKPDQF 314
Query: 252 TFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLL 311
+ L +CA+L GE S + +AN+LI+MYA+ G + + F +
Sbjct: 315 SIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEM 374
Query: 312 FEKSLVSCETIVDVIVRD--LNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKG 369
EK +V + + ++ + + +TE GI T+ LL G G I G
Sbjct: 375 KEKDIVIMNAAISGLAKNGHVKLSFAVFGQTE-KLGISPDGSTFLGLLCGCVHAGLIQDG 433
Query: 370 EQ-IHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDR-NVITWTSIISG 425
+ +A+ + + ++ ++ + G + A ++ DM R N I W +++SG
Sbjct: 434 LRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSG 491
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 157/314 (50%), Gaps = 29/314 (9%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
R +V+W ++ S + + EA+ F M+E G P+ Y L AC + G +
Sbjct: 175 RSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWI 234
Query: 65 FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG 124
++ + V L++++ K CG +E A VF+ M E+++VTW+ M+ +A
Sbjct: 235 V-KYMEEMEMQKNSFVRTTLVNLYAK-CGKMEKARSVFDSMVEKDIVTWSTMIQGYASNS 292
Query: 125 YPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGC 184
+P++ I+LF +ML PD+F++ L++CA L L +G+ S + R +L +
Sbjct: 293 FPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMAN 352
Query: 185 SLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQG 244
+L+DMYAKC G++ VF M E ++V A I+G + +G + + +F +
Sbjct: 353 ALIDMYAKC---GAMARGFEVFKEMKEKDIVIMNAAISGLAK-NGHVKLSFAVFGQTEKL 408
Query: 245 NVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGL---SAVNCV---------ANSLI 292
++P+G TF +L C +H+ I+ GL +A++CV ++
Sbjct: 409 GISPDGSTFLGLLCGC-----------VHAGLIQDGLRFFNAISCVYALKRTVEHYGCMV 457
Query: 293 NMYARSGRLECARK 306
+++ R+G L+ A +
Sbjct: 458 DLWGRAGMLDDAYR 471
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 115/228 (50%), Gaps = 19/228 (8%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
++D+V+W +M+ +A+NS E + FL ML+ P+++ L +C+ S+G +
Sbjct: 275 EKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCA-----SLGAL 329
Query: 64 VFG----SVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTR 119
G S++ F +++ + LIDM+ K CG + VF++M+E+++V N ++
Sbjct: 330 DLGEWGISLIDRHEFLTNLFMANALIDMYAK-CGAMARGFEVFKEMKEKDIVIMNAAISG 388
Query: 120 FAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALD 179
A+ G+ + S +F + G +PD T L C L+ G + + I AL
Sbjct: 389 LAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFN-AISCVYALK 447
Query: 180 LCV---GCSLVDMYAKCAVDGSLVDSRRVFNSMP-EHNVVSWTALIAG 223
V GC +VD++ + G L D+ R+ MP N + W AL++G
Sbjct: 448 RTVEHYGC-MVDLWGRA---GMLDDAYRLICDMPMRPNAIVWGALLSG 491
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 445 bits (1145), Expect = e-125, Method: Compositional matrix adjust.
Identities = 265/761 (34%), Positives = 422/761 (55%), Gaps = 46/761 (6%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFY-PNEYCFTAALRACSNSLYFSVG 61
S +VS+ +++S F+ ++E EAL F M + G PNEY F A L AC FS+G
Sbjct: 141 SSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLG 200
Query: 62 RVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGD-IESAHRVFEKMQERNVVTWNLMMTRF 120
+ G ++K+G+ +S V V L+ ++ K G + ++F+++ +R+V +WN +++
Sbjct: 201 IQIHGLIVKSGFLNS-VFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSL 259
Query: 121 AQMGYPEDSIDLFFRM-LLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALD 179
+ G + DLF+ M + G+ D FTL++ L++C + +L G++LH IR GL +
Sbjct: 260 VKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQE 319
Query: 180 LCVGCSLVDMYAK--------------CAVDG-------------SLVDSR-RVFNSMPE 211
L V +L+ Y+K A D +VDS +F ++ E
Sbjct: 320 LSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTE 379
Query: 212 HNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQ 271
N +++ AL+AG+ R +G +A++LF DMLQ V F+ +S + AC + + EQ
Sbjct: 380 KNTITYNALMAGFCR-NGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQ 438
Query: 272 LHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVI---VR 328
+H IK G + C+ +L++M R R+ A + FD + +L S + +I R
Sbjct: 439 IHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFD-QWPSNLDSSKATTSIIGGYAR 497
Query: 329 DLNSDE--TLNHET--EHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETN 384
+ D+ +L H T E + S T +L+ +G G QIH +K+G+ ++
Sbjct: 498 NGLPDKAVSLFHRTLCEQKLFLDEVSLT--LILAVCGTLGFREMGYQIHCYALKAGYFSD 555
Query: 385 LSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLE 444
+S+ N+LISMY+KC + + A+++FN M + +VI+W S+IS + +AL L+ M E
Sbjct: 556 ISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNE 615
Query: 445 TGVKPNDVTYIAVLSACSHV--GLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGL 502
+KP+ +T V+SA + + F SM+ + + P EHY V VLG GL
Sbjct: 616 KEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGL 675
Query: 503 LSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNL 562
L EA + INSMP+ + V R+LL SCR+H NT + + AK+IL +P P+ YIL SN+
Sbjct: 676 LEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNI 735
Query: 563 YATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELDEL 622
Y+ W+ IR+ M+++ K SWI EN++H FH DTSHPQ + IY L+ L
Sbjct: 736 YSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDIYRGLEIL 795
Query: 623 ASKIKKLGYVPNTDFVLHDVEDEQKEQYLFQHSEKIAVAFALISI-PNPKPIRIFKNLRV 681
+ K+GY PNT++VL +V++ K+ +LF HS K+AV + ++S KP+R+ KN+ +
Sbjct: 796 IMECLKVGYEPNTEYVLQEVDEFMKKSFLFHHSAKLAVTYGILSSNTRGKPVRVMKNVML 855
Query: 682 CGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGTCSCNDYW 722
CGDCH KYIS V R IV+RD++ FHH +G CSC D W
Sbjct: 856 CGDCHEFFKYISVVVKREIVLRDSSGFHHFVNGKCSCRDLW 896
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 185/378 (48%), Gaps = 49/378 (12%)
Query: 182 VGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDM 241
+G +L+ Y K G ++ VF S+ VVS+TALI+G+ R E EA+++F M
Sbjct: 116 LGNALISTYLKL---GFPREAILVFVSLSSPTVVSYTALISGFSR-LNLEIEALKVFFRM 171
Query: 242 LQ-GNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGR 300
+ G V PN +TF ++L AC + F G Q+H +K G V+NSL+++Y +
Sbjct: 172 RKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSG 231
Query: 301 LEC--ARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN--HETEHTTGIGACSFTYACL 356
C K FD + ++ + S T+V +V++ S + + +E G G SFT + L
Sbjct: 232 SSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTL 291
Query: 357 LSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSK------------------- 397
LS + +G ++H ++ G LS+NNALI YSK
Sbjct: 292 LSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDA 351
Query: 398 ------------CGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLET 445
G ++A+++F ++ ++N IT+ ++++GF ++G+ KAL+LF +ML+
Sbjct: 352 VTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQR 411
Query: 446 GVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYAC----MVDVLGRSG 501
GV+ D + + + AC GL+ E K + H + C ++D+ R
Sbjct: 412 GVELTDFSLTSAVDAC---GLVSE--KKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCE 466
Query: 502 LLSEAIEFINSMPLDADA 519
+++A E + P + D+
Sbjct: 467 RMADAEEMFDQWPSNLDS 484
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 71/133 (53%), Gaps = 2/133 (1%)
Query: 339 ETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKC 398
+ E T I + + LL +A + + +HA +K E + NALIS Y K
Sbjct: 69 DKEETEDIESVIDGFFYLLRLSAQYHDVEVTKAVHASFLKLR-EEKTRLGNALISTYLKL 127
Query: 399 GNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETG-VKPNDVTYIAV 457
G A+ VF + V+++T++ISGF++ +AL++F+ M + G V+PN+ T++A+
Sbjct: 128 GFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAI 187
Query: 458 LSACSHVGLIDEG 470
L+AC V G
Sbjct: 188 LTACVRVSRFSLG 200
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 444 bits (1142), Expect = e-124, Method: Compositional matrix adjust.
Identities = 245/691 (35%), Positives = 388/691 (56%), Gaps = 44/691 (6%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
++ +SW +++S + + + EA F +M G PNEY + LR C++ + G +
Sbjct: 88 KNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQI 147
Query: 65 FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQ-ERNVVTWNLMMTRFAQM 123
G +KTG FD V+V L+ M+ + C I A +FE M+ E+N VTW M+T ++Q
Sbjct: 148 HGHTIKTG-FDLDVNVVNGLLAMYAQ-CKRISEAEYLFETMEGEKNNVTWTSMLTGYSQN 205
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVG 183
G+ +I+ F + G +++T S LTACA + VG Q+H +++SG ++ V
Sbjct: 206 GFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQ 265
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQ 243
+L+DMYAKC + +R + M +VVSW ++I G VR G EA+ +F M +
Sbjct: 266 SALIDMYAKCR---EMESARALLEGMEVDDVVSWNSMIVGCVR-QGLIGEALSMFGRMHE 321
Query: 244 GNVAPNGFTFSSVLKACA-NLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLE 302
++ + FT S+L A + + H +K G + V N+L++MYA+ G ++
Sbjct: 322 RDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMD 381
Query: 303 CARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGAA 361
A K F+ + EK ++S +V + + DE L GI A +LS +A
Sbjct: 382 SALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASA 441
Query: 362 CIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTS 421
+ + G+Q+H +KSGF ++LS+NN+L++MY+KCG+ E A +FN M R++ITWT
Sbjct: 442 ELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTC 501
Query: 422 IISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCH 481
+I G+AK+G L+++ ++F+SMR +
Sbjct: 502 LIVGYAKNG-----------------------------------LLEDAQRYFDSMRTVY 526
Query: 482 GVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHA 541
G+ P EHYACM+D+ GRSG + + ++ M ++ DA VW+++L + R HGN E GE A
Sbjct: 527 GITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERA 586
Query: 542 AKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHK 601
AK ++E EP++ Y+ LSN+Y+ R + A +R+ MK + I KE G SW+E + +VH
Sbjct: 587 AKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHS 646
Query: 602 FHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTDFVLHDVEDEQKEQYLFQHSEKIAVA 661
F D HP+ +IY ++DE+ IK+ GY + F LHD++ E KE L HSEK+AVA
Sbjct: 647 FMSEDRRHPRMVEIYSKVDEMMLLIKEAGYFADMSFALHDLDKEGKELGLAYHSEKLAVA 706
Query: 662 FALISIPNPKPIRIFKNLRVCGDCHTAIKYI 692
F L+ +P+ PIRI KNLRVCGDCH+A+K +
Sbjct: 707 FGLLVVPSGAPIRIIKNLRVCGDCHSAMKLL 737
Score = 179 bits (453), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 130/442 (29%), Positives = 220/442 (49%), Gaps = 17/442 (3%)
Query: 1 MGSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSV 60
M +++ V+W SM++ ++ N +A+ F D+ G N+Y F + L AC++ V
Sbjct: 186 MEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRV 245
Query: 61 GRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRF 120
G V ++K+G F +++ V LIDM+ K C ++ESA + E M+ +VV+WN M+
Sbjct: 246 GVQVHCCIVKSG-FKTNIYVQSALIDMYAK-CREMESARALLEGMEVDDVVSWNSMIVGC 303
Query: 121 AQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALT--ACAELELLSVGKQLHSWVIRSGLAL 178
+ G +++ +F RM D FT+ S L A + E + + H ++++G A
Sbjct: 304 VRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTE-MKIASSAHCLIVKTGYAT 362
Query: 179 DLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLF 238
V +LVDMYAK G + + +VF M E +V+SWTAL+ G +G EA++LF
Sbjct: 363 YKLVNNALVDMYAK---RGIMDSALKVFEGMIEKDVISWTALVTGNTH-NGSYDEALKLF 418
Query: 239 CDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARS 298
C+M G + P+ +SVL A A L FG+Q+H IK G + V NSL+ MY +
Sbjct: 419 CNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKC 478
Query: 299 GRLECARKCFDLLFEKSLVSCE-TIVDVIVRDLNSDETLNHETEHTT-GIGACSFTYACL 356
G LE A F+ + + L++ IV L D ++ T GI YAC+
Sbjct: 479 GSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYACM 538
Query: 357 LSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCG---NKEAALQVFNDMGD 413
+ G G ++ L+ + E + ++ A+++ K G N E A + ++
Sbjct: 539 ID---LFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEP 595
Query: 414 RNVITWTSIISGFAKHGYATKA 435
N + + + + ++ G +A
Sbjct: 596 NNAVPYVQLSNMYSAAGRQDEA 617
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 70/139 (50%), Gaps = 3/139 (2%)
Query: 389 NALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVK 448
N +I YS A ++F +N I+W ++ISG+ K G +A LF+EM G+K
Sbjct: 63 NTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIK 122
Query: 449 PNDVTYIAVLSACSHVGLIDEGWK-HFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAI 507
PN+ T +VL C+ + L+ G + H ++++ G V ++ + + +SEA
Sbjct: 123 PNEYTLGSVLRMCTSLVLLLRGEQIHGHTIK--TGFDLDVNVVNGLLAMYAQCKRISEAE 180
Query: 508 EFINSMPLDADAMVWRSLL 526
+M + + + W S+L
Sbjct: 181 YLFETMEGEKNNVTWTSML 199
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 441 bits (1134), Expect = e-124, Method: Compositional matrix adjust.
Identities = 224/580 (38%), Positives = 353/580 (60%), Gaps = 5/580 (0%)
Query: 144 DRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSR 203
+R + L CA + K H +IR L D+ + L++ Y+KC G + +R
Sbjct: 60 NRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKC---GFVELAR 116
Query: 204 RVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANL 263
+VF+ M E ++VSW +I Y R E EA+ +F +M + FT SSVL AC
Sbjct: 117 QVFDGMLERSLVSWNTMIGLYTRNR-MESEALDIFLEMRNEGFKFSEFTISSVLSACGVN 175
Query: 264 PDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIV 323
D ++LH ++K + V +L+++YA+ G ++ A + F+ + +KS V+ ++V
Sbjct: 176 CDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMV 235
Query: 324 DVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFE 382
V++ N +E L + + FT + ++ + + + +G+Q+HA++ KSGF
Sbjct: 236 AGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFG 295
Query: 383 TNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEM 442
+N+ + ++ + MY+KCG+ + +F+++ ++N+ W +IISGFAKH + + LF +M
Sbjct: 296 SNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKM 355
Query: 443 LETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGL 502
+ G+ PN+VT+ ++LS C H GL++EG + F MR +G+ P V HY+CMVD+LGR+GL
Sbjct: 356 QQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGL 415
Query: 503 LSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNL 562
LSEA E I S+P D A +W SLL SCRV+ N EL E AA+ + E EP + ++LLSN+
Sbjct: 416 LSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNI 475
Query: 563 YATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELDEL 622
YA ++W ++A RK ++ + K G SWI+++++VH F VG++ HP+ ++I LD L
Sbjct: 476 YAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNL 535
Query: 623 ASKIKKLGYVPNTDFVLHDVEDEQKEQYLFQHSEKIAVAFALISIPNPKPIRIFKNLRVC 682
K +K GY P+ + LHDVE +KE+ L QHSEK+A+ F L+ +P P+RI KNLR+C
Sbjct: 536 VIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRIC 595
Query: 683 GDCHTAIKYISKVTGRVIVVRDANRFHHIKDGTCSCNDYW 722
DCH +K S T R I+VRD NRFHH DG CSC D+W
Sbjct: 596 VDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/259 (35%), Positives = 148/259 (57%), Gaps = 6/259 (2%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
+R LVSW +M+ + N ME EAL FL+M GF +E+ ++ L AC + +
Sbjct: 124 ERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKK 183
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
+ +KT D ++ VG L+D++ K CG I+ A +VFE MQ+++ VTW+ M+ + Q
Sbjct: 184 LHCLSVKTC-IDLNLYVGTALLDLYAK-CGMIKDAVQVFESMQDKSSVTWSSMVAGYVQN 241
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVG 183
E+++ L+ R ++FTL+S + AC+ L L GKQ+H+ + +SG ++ V
Sbjct: 242 KNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVA 301
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQ 243
S VDMYAKC GSL +S +F+ + E N+ W +I+G+ + + +E M LF M Q
Sbjct: 302 SSAVDMYAKC---GSLRESYIIFSEVQEKNLELWNTIISGFAK-HARPKEVMILFEKMQQ 357
Query: 244 GNVAPNGFTFSSVLKACAN 262
+ PN TFSS+L C +
Sbjct: 358 DGMHPNEVTFSSLLSVCGH 376
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 202/399 (50%), Gaps = 21/399 (5%)
Query: 37 GFYPNEYC----FTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGC 92
G Y NE+ L+ C+ + + G +++ + V++ LI+ + K C
Sbjct: 52 GRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRID-LEGDVTLLNVLINAYSK-C 109
Query: 93 GDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSAL 152
G +E A +VF+ M ER++V+WN M+ + + +++D+F M G+ FT++S L
Sbjct: 110 GFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVL 169
Query: 153 TACA----ELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNS 208
+AC LE K+LH +++ + L+L VG +L+D+YAKC G + D+ +VF S
Sbjct: 170 SACGVNCDALEC----KKLHCLSVKTCIDLNLYVGTALLDLYAKC---GMIKDAVQVFES 222
Query: 209 MPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGF 268
M + + V+W++++AGYV+ E EA+ L+ + ++ N FT SSV+ AC+NL
Sbjct: 223 MQDKSSVTWSSMVAGYVQNKNYE-EALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIE 281
Query: 269 GEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVR 328
G+Q+H+ K G + VA+S ++MYA+ G L + F + EK+L TI+ +
Sbjct: 282 GKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAK 341
Query: 329 DLNSDETLN-HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKS-GFETNLS 386
E + E G+ T++ LLS G + +G + L+ + G N+
Sbjct: 342 HARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVV 401
Query: 387 INNALISMYSKCGNKEAALQVFNDMG-DRNVITWTSIIS 424
+ ++ + + G A ++ + D W S+++
Sbjct: 402 HYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLA 440
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 440 bits (1132), Expect = e-123, Method: Compositional matrix adjust.
Identities = 251/719 (34%), Positives = 409/719 (56%), Gaps = 9/719 (1%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDML-EHGFYPNEYCFTAALRACSNSLYFSVG 61
S+R+L SW ++ +A EA+ + ML G P+ Y F LR C + G
Sbjct: 156 SERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARG 215
Query: 62 RVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFA 121
+ V V++ GY + + V LI M+VK CGD++SA +F++M R++++WN M++ +
Sbjct: 216 KEVHVHVVRYGY-ELDIDVVNALITMYVK-CGDVKSARLLFDRMPRRDIISWNAMISGYF 273
Query: 122 QMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLC 181
+ G + ++LFF M PD TLTS ++AC L +G+ +H++VI +G A+D+
Sbjct: 274 ENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDIS 333
Query: 182 VGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDM 241
V SL MY GS ++ ++F+ M ++VSWT +I+GY + +A+ + M
Sbjct: 334 VCNSLTQMYLNA---GSWREAEKLFSRMERKDIVSWTTMISGY-EYNFLPDKAIDTYRMM 389
Query: 242 LQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRL 301
Q +V P+ T ++VL ACA L D G +LH IK L + VAN+LINMY++ +
Sbjct: 390 DQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCI 449
Query: 302 ECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGAA 361
+ A F + K+++S +I+ + + E L + + + T L+ A
Sbjct: 450 DKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQPNAITLTAALAACA 509
Query: 362 CIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTS 421
IG + G++IHA V+++G + + NAL+ MY +CG A FN ++V +W
Sbjct: 510 RIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQ-KKDVTSWNI 568
Query: 422 IISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCH 481
+++G+++ G + +ELF M+++ V+P+++T+I++L CS ++ +G +F+ M +
Sbjct: 569 LLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMED-Y 627
Query: 482 GVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHA 541
GV P ++HYAC+VD+LGR+G L EA +FI MP+ D VW +LL +CR+H +LGE +
Sbjct: 628 GVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELS 687
Query: 542 AKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHK 601
A+ I E + YILL NLYA +W +VA +R+ MK+ + +AG SW+EV+ +VH
Sbjct: 688 AQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHA 747
Query: 602 FHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTDFVLHDVEDEQKEQYLFQHSEKIAVA 661
F D HPQ ++I L+ K+ ++G ++ D + +++ HSE+ A+A
Sbjct: 748 FLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFCGHSERKAIA 807
Query: 662 FALISIPNPKPIRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGTCSCND 720
F LI+ PI + KNL +C +CH +K+ISK R I VRDA FHH KDG CSC D
Sbjct: 808 FGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISVRDAEHFHHFKDGECSCGD 866
Score = 217 bits (552), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 166/546 (30%), Positives = 276/546 (50%), Gaps = 16/546 (2%)
Query: 18 ANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVLKTGYFDSH 77
AN +E EA+ M E +E F A +R C G V+ S+ +
Sbjct: 71 ANGKLE-EAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVY-SIALSSMSSLG 128
Query: 78 VSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRML 137
V +G + MFV+ G++ A VF KM ERN+ +WN+++ +A+ GY ++++ L+ RML
Sbjct: 129 VELGNAFLAMFVR-FGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187
Query: 138 -LSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVD 196
+ G PD +T L C + L+ GK++H V+R G LD+ V +L+ MY KC
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKC--- 244
Query: 197 GSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSV 256
G + +R +F+ MP +++SW A+I+GY +G E + LF M +V P+ T +SV
Sbjct: 245 GDVKSARLLFDRMPRRDIISWNAMISGYFE-NGMCHEGLELFFAMRGLSVDPDLMTLTSV 303
Query: 257 LKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSL 316
+ AC L D G +H+ I G + V NSL MY +G A K F + K +
Sbjct: 304 ISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDI 363
Query: 317 VSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHAL 375
VS T++ + D+ ++ + + T A +LS A +G + G ++H L
Sbjct: 364 VSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKL 423
Query: 376 VVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKA 435
+K+ + + + N LI+MYSKC + AL +F+++ +NVI+WTSII+G + +A
Sbjct: 424 AIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEA 483
Query: 436 LELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWK-HFNSMRHCHGVVPRVEHYACMV 494
L +F ++ ++PN +T A L+AC+ +G + G + H + +R G+ + + ++
Sbjct: 484 L-IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPN--ALL 540
Query: 495 DVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTEL-GEHAAKMILEREPHDP 553
D+ R G ++ A NS D + W LL G + E +M+ R D
Sbjct: 541 DMYVRCGRMNTAWSQFNSQKKDVTS--WNILLTGYSERGQGSMVVELFDRMVKSRVRPDE 598
Query: 554 ATYILL 559
T+I L
Sbjct: 599 ITFISL 604
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 112/253 (44%), Gaps = 35/253 (13%)
Query: 368 KGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFA 427
+G +++++ + S + + NA ++M+ + GN A VF M +RN+ +W ++ G+A
Sbjct: 112 EGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYA 171
Query: 428 KHGYATKALELFYEMLET-GVKPNDVTYIAVLSACS-----------HVGLIDEGWK--- 472
K GY +A+ L++ ML GVKP+ T+ VL C HV ++ G++
Sbjct: 172 KQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDI 231
Query: 473 --------------HFNSMRHCHGVVPR--VEHYACMVDVLGRSGLLSEAIEFINSM--- 513
S R +PR + + M+ +G+ E +E +M
Sbjct: 232 DVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGL 291
Query: 514 PLDADAMVWRSLLGSCRVHGNTELGEHA-AKMILEREPHDPATYILLSNLYATEERWYDV 572
+D D M S++ +C + G+ LG A +I D + L+ +Y W +
Sbjct: 292 SVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREA 351
Query: 573 AAIRKTMKQKKII 585
+ M++K I+
Sbjct: 352 EKLFSRMERKDIV 364
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 434 bits (1117), Expect = e-122, Method: Compositional matrix adjust.
Identities = 239/650 (36%), Positives = 357/650 (54%), Gaps = 42/650 (6%)
Query: 111 VTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSW 170
+ +N + ++ P +I + R+ G D+F+ L A +++ L G +LH
Sbjct: 77 IVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGV 136
Query: 171 VIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQ 230
+ D V +DMYA C G + +R VF+ M +VV+W +I Y R G
Sbjct: 137 AFKIATLCDPFVETGFMDMYASC---GRINYARNVFDEMSHRDVVTWNTMIERYCR-FGL 192
Query: 231 EQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANS 290
EA +LF +M NV P+ +++ AC + + ++ I+ + + +
Sbjct: 193 VDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTA 252
Query: 291 LINMYA-------------------------------RSGRLECARKCFDLLFEKSLVSC 319
L+ MYA + GRL+ A+ FD +K LV
Sbjct: 253 LVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCW 312
Query: 320 ETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVK 378
T++ V E L E +GI + ++S A +G + K + +H+ +
Sbjct: 313 TTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHV 372
Query: 379 SGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALEL 438
+G E+ LSINNALI+MY+KCG +A VF M RNV++W+S+I+ + HG A+ AL L
Sbjct: 373 NGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSL 432
Query: 439 FYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLG 498
F M + V+PN+VT++ VL CSH GL++EG K F SM + + P++EHY CMVD+ G
Sbjct: 433 FARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFG 492
Query: 499 RSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYIL 558
R+ LL EA+E I SMP+ ++ ++W SL+ +CR+HG ELG+ AAK ILE EP +L
Sbjct: 493 RANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVL 552
Query: 559 LSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDE 618
+SN+YA E+RW DV IR+ M++K + KE G S I+ + H+F +GD H Q+ +IY +
Sbjct: 553 MSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAK 612
Query: 619 LDELASKIKKLGYVPNTDFVLHDVEDEQKEQYLFQHSEKIAVAFALISIPNPKP------ 672
LDE+ SK+K GYVP+ VL DVE+E+K+ + HSEK+A+ F L++ +
Sbjct: 613 LDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGV 672
Query: 673 IRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGTCSCNDYW 722
IRI KNLRVC DCH K +SKV R I+VRD RFH K+G CSC DYW
Sbjct: 673 IRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 202/448 (45%), Gaps = 43/448 (9%)
Query: 19 NNSMEHEALVTFLDMLEH-GFYPNEYCFTAALRACSNSLYFSVGRVVFGSVLKTGYF-DS 76
+ S E A + F + H G +++ F L+A S G + G K D
Sbjct: 87 SRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDP 146
Query: 77 HVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRM 136
V G +DM+ CG I A VF++M R+VVTWN M+ R+ + G +++ LF M
Sbjct: 147 FVETG--FMDMYA-SCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEM 203
Query: 137 LLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYA----- 191
S PD L + ++AC + + ++ ++I + + +D + +LV MYA
Sbjct: 204 KDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCM 263
Query: 192 --------------------------KCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYV 225
KC G L D++ +F+ + ++V WT +I+ YV
Sbjct: 264 DMAREFFRKMSVRNLFVSTAMVSGYSKC---GRLDDAQVIFDQTEKKDLVCWTTMISAYV 320
Query: 226 RGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVN 285
S QEA+R+F +M + P+ + SV+ ACANL + +HS GL +
Sbjct: 321 E-SDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESEL 379
Query: 286 CVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN-HETEHTT 344
+ N+LINMYA+ G L+ R F+ + +++VS ++++ + + + L+
Sbjct: 380 SINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQE 439
Query: 345 GIGACSFTYACLLSGAACIGTIGKGEQIHA-LVVKSGFETNLSINNALISMYSKCGNKEA 403
+ T+ +L G + G + +G++I A + + L ++ ++ +
Sbjct: 440 NVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLRE 499
Query: 404 ALQVFNDMG-DRNVITWTSIISGFAKHG 430
AL+V M NV+ W S++S HG
Sbjct: 500 ALEVIESMPVASNVVIWGSLMSACRIHG 527
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 145/289 (50%), Gaps = 33/289 (11%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR 62
S RD+V+W +M+ + + EA F +M + P+E + AC + R
Sbjct: 173 SHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNR 232
Query: 63 VVFGSVLKTGY-FDSHV---------SVGC-----------ELIDMFVK--------GCG 93
++ +++ D+H+ GC + ++FV CG
Sbjct: 233 AIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCG 292
Query: 94 DIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALT 153
++ A +F++ +++++V W M++ + + YP++++ +F M SG PD ++ S ++
Sbjct: 293 RLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVIS 352
Query: 154 ACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHN 213
ACA L +L K +HS + +GL +L + +L++MYAKC G L +R VF MP N
Sbjct: 353 ACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKC---GGLDATRDVFEKMPRRN 409
Query: 214 VVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACAN 262
VVSW+++I + G+ +A+ LF M Q NV PN TF VL C++
Sbjct: 410 VVSWSSMINA-LSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSH 457
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 434 bits (1116), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/561 (40%), Positives = 337/561 (60%), Gaps = 7/561 (1%)
Query: 165 KQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGY 224
K++H+ V+R+G + + L + V G + +R+VF+ M + + W L GY
Sbjct: 28 KKIHAIVLRTGFSEKNSL---LTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGY 84
Query: 225 VRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAV 284
VR E++ L+ M V P+ FT+ V+KA + L DF G LH+ +K G +
Sbjct: 85 VRNQ-LPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCL 143
Query: 285 NCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEH-T 343
VA L+ MY + G L A F+ + K LV+ + V V+ NS L + +
Sbjct: 144 GIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCA 203
Query: 344 TGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEA 403
+ SFT +LS +G++ GE+I+ K + N+ + NA + M+ KCGN EA
Sbjct: 204 DAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEA 263
Query: 404 ALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSH 463
A +F +M RNV++W+++I G+A +G + +AL LF M G++PN VT++ VLSACSH
Sbjct: 264 ARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSH 323
Query: 464 VGLIDEGWKHFNSMRHCH--GVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMV 521
GL++EG ++F+ M + + PR EHYACMVD+LGRSGLL EA EFI MP++ D +
Sbjct: 324 AGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGI 383
Query: 522 WRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQ 581
W +LLG+C VH + LG+ A +++E P + ++LLSN+YA +W V +R M++
Sbjct: 384 WGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRK 443
Query: 582 KKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTDFVLHD 641
K A YS +E E ++H F+ GD SHPQ++ IY++LDE+ KI+K+GYVP+T V HD
Sbjct: 444 LGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHD 503
Query: 642 VEDEQKEQYLFQHSEKIAVAFALISIPNPKPIRIFKNLRVCGDCHTAIKYISKVTGRVIV 701
VE E+KE L HSEK+A+AF LI PIR+ KNLR C DCH K++S +T I+
Sbjct: 504 VEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEII 563
Query: 702 VRDANRFHHIKDGTCSCNDYW 722
+RD NRFHH ++G CSC ++W
Sbjct: 564 MRDKNRFHHFRNGVCSCKEFW 584
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 152/304 (50%), Gaps = 9/304 (2%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
K + W ++ + N + E+L+ + M + G P+E+ + ++A S FS G
Sbjct: 71 KPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFA 130
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
+ V+K G F V EL+ M++K G++ SA +FE MQ +++V WN + Q
Sbjct: 131 LHAHVVKYG-FGCLGIVATELVMMYMK-FGELSSAEFLFESMQVKDLVAWNAFLAVCVQT 188
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVG 183
G +++ F +M D FT+ S L+AC +L L +G++++ + + ++ V
Sbjct: 189 GNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVE 248
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQ 243
+ +DM+ KC G+ +R +F M + NVVSW+ +I GY +G +EA+ LF M
Sbjct: 249 NARLDMHLKC---GNTEAARVLFEEMKQRNVVSWSTMIVGYAM-NGDSREALTLFTTMQN 304
Query: 244 GNVAPNGFTFSSVLKACANLPDFGFGEQLHS---QTIKLGLSAVNCVANSLINMYARSGR 300
+ PN TF VL AC++ G++ S Q+ L ++++ RSG
Sbjct: 305 EGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGL 364
Query: 301 LECA 304
LE A
Sbjct: 365 LEEA 368
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 176/368 (47%), Gaps = 13/368 (3%)
Query: 68 VLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPE 127
VL+TG+ + + S+ +L++ V GD+ A +VF++M + + WN + + + P
Sbjct: 34 VLRTGFSEKN-SLLTQLLENLVV-IGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPF 91
Query: 128 DSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLV 187
+S+ L+ +M G PD FT + A ++L S G LH+ V++ G V LV
Sbjct: 92 ESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELV 151
Query: 188 DMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVA 247
MY K G L + +F SM ++V+W A +A V+ +G A+ F M V
Sbjct: 152 MMYMKF---GELSSAEFLFESMQVKDLVAWNAFLAVCVQ-TGNSAIALEYFNKMCADAVQ 207
Query: 248 PNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKC 307
+ FT S+L AC L GE+++ + K + V N+ ++M+ + G E AR
Sbjct: 208 FDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVL 267
Query: 308 FDLLFEKSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGAACIGTI 366
F+ + ++++VS T++ + +S E L T G+ T+ +LS + G +
Sbjct: 268 FEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLV 327
Query: 367 GKGEQIHALVVKSGFETNLSINNA----LISMYSKCGNKEAALQVFNDMG-DRNVITWTS 421
+G++ +L+V+S + NL ++ + + G E A + M + + W +
Sbjct: 328 NEGKRYFSLMVQSN-DKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGA 386
Query: 422 IISGFAKH 429
++ A H
Sbjct: 387 LLGACAVH 394
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 434 bits (1116), Expect = e-121, Method: Compositional matrix adjust.
Identities = 206/462 (44%), Positives = 304/462 (65%), Gaps = 2/462 (0%)
Query: 263 LPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETI 322
+ D GE +HS I+ G ++ V NSL+++YA G + A K FD + EK LV+ ++
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 323 VDVIVRDLNSDETLNHETE-HTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGF 381
++ + +E L TE ++ GI FT LLS A IG + G+++H ++K G
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 120
Query: 382 ETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYE 441
NL +N L+ +Y++CG E A +F++M D+N ++WTS+I G A +G+ +A+ELF
Sbjct: 121 TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKY 180
Query: 442 MLET-GVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRS 500
M T G+ P ++T++ +L ACSH G++ EG+++F MR + + PR+EH+ CMVD+L R+
Sbjct: 181 MESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARA 240
Query: 501 GLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLS 560
G + +A E+I SMP+ + ++WR+LLG+C VHG+++L E A IL+ EP+ Y+LLS
Sbjct: 241 GQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLS 300
Query: 561 NLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELD 620
N+YA+E+RW DV IRK M + + K G+S +EV N+VH+F +GD SHPQ+ IY +L
Sbjct: 301 NMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLK 360
Query: 621 ELASKIKKLGYVPNTDFVLHDVEDEQKEQYLFQHSEKIAVAFALISIPNPKPIRIFKNLR 680
E+ +++ GYVP V DVE+E+KE + HSEKIA+AF LIS P PI + KNLR
Sbjct: 361 EMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLR 420
Query: 681 VCGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGTCSCNDYW 722
VC DCH AIK +SKV R IVVRD +RFHH K+G+CSC DYW
Sbjct: 421 VCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 127/204 (62%), Gaps = 7/204 (3%)
Query: 60 VGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTR 119
+G + V+++G F S + V L+ ++ CGD+ SA++VF+KM E+++V WN ++
Sbjct: 6 LGETIHSVVIRSG-FGSLIYVQNSLLHLYA-NCGDVASAYKVFDKMPEKDLVAWNSVING 63
Query: 120 FAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALD 179
FA+ G PE+++ L+ M G PD FT+ S L+ACA++ L++GK++H ++I+ GL +
Sbjct: 64 FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN 123
Query: 180 LCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGY-VRGSGQEQEAMRLF 238
L L+D+YA+C G + +++ +F+ M + N VSWT+LI G V G G+E + +
Sbjct: 124 LHSSNVLLDLYARC---GRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKY 180
Query: 239 CDMLQGNVAPNGFTFSSVLKACAN 262
+ +G + P TF +L AC++
Sbjct: 181 MESTEG-LLPCEITFVGILYACSH 203
Score = 130 bits (326), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 144/274 (52%), Gaps = 8/274 (2%)
Query: 161 LSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTAL 220
+ +G+ +HS VIRSG + V SL+ +YA C G + + +VF+ MPE ++V+W ++
Sbjct: 4 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANC---GDVASAYKVFDKMPEKDLVAWNSV 60
Query: 221 IAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLG 280
I G+ +G+ +EA+ L+ +M + P+GFT S+L ACA + G+++H IK+G
Sbjct: 61 INGFAE-NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVG 119
Query: 281 LSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCET-IVDVIVRDLNSDET-LNH 338
L+ +N L+++YAR GR+E A+ FD + +K+ VS + IV + V + L
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFK 179
Query: 339 ETEHTTGIGACSFTYACLLSGAACIGTIGKG-EQIHALVVKSGFETNLSINNALISMYSK 397
E T G+ C T+ +L + G + +G E + + E + ++ + ++
Sbjct: 180 YMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLAR 239
Query: 398 CGNKEAALQVFNDMG-DRNVITWTSIISGFAKHG 430
G + A + M NV+ W +++ HG
Sbjct: 240 AGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 273
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 137/287 (47%), Gaps = 16/287 (5%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
++DLV+W S+++ FA N EAL + +M G P+ + + L AC+ ++G+
Sbjct: 51 EKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKR 110
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
V ++K G ++ L+D++ + CG +E A +F++M ++N V+W ++ A
Sbjct: 111 VHVYMIKVG-LTRNLHSSNVLLDLYAR-CGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVN 168
Query: 124 GYPEDSIDLFFRM-LLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCV 182
G+ +++I+LF M G P T L AC+ ++ G + +R ++ +
Sbjct: 169 GFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRR-MREEYKIEPRI 227
Query: 183 ---GCSLVDMYAKCAVDGSLVDSRRVFNSMP-EHNVVSWTALI-AGYVRGSGQEQEAMRL 237
GC +VD+ A+ G + + SMP + NVV W L+ A V G E R+
Sbjct: 228 EHFGC-MVDLLARA---GQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARI 283
Query: 238 FCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAV 284
L+ N + + S++ + D +++ Q ++ G+ V
Sbjct: 284 QILQLEPNHSGDYVLLSNMYASEQRWSDV---QKIRKQMLRDGVKKV 327
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 434 bits (1115), Expect = e-121, Method: Compositional matrix adjust.
Identities = 240/624 (38%), Positives = 349/624 (55%), Gaps = 52/624 (8%)
Query: 148 LTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVD-SRRVF 206
L + C + LS Q+H+ I+SG D ++ A + +D + ++F
Sbjct: 26 LFPQINNCRTIRDLS---QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIF 82
Query: 207 NSMPEHNVVSWTALIAGYVRGSGQEQE-AMRLFCDMLQGN-VAPNGFTFSSVLKACANLP 264
N MP+ N SW +I G+ + A+ LF +M+ V PN FTF SVLKACA
Sbjct: 83 NQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTG 142
Query: 265 DFGFGEQLHSQTIKLGLSAVNCVANSLINMYA---------------------------- 296
G+Q+H +K G V ++L+ MY
Sbjct: 143 KIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRR 202
Query: 297 -----------------RSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHE 339
R G + AR FD + ++S+VS T++ + + +
Sbjct: 203 KRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVF 262
Query: 340 TEHTTG-IGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKC 398
E G I T +L + +G++ GE +H SG + + +ALI MYSKC
Sbjct: 263 REMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKC 322
Query: 399 GNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVL 458
G E A+ VF + NVITW+++I+GFA HG A A++ F +M + GV+P+DV YI +L
Sbjct: 323 GIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLL 382
Query: 459 SACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDAD 518
+ACSH GL++EG ++F+ M G+ PR+EHY CMVD+LGRSGLL EA EFI +MP+ D
Sbjct: 383 TACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPD 442
Query: 519 AMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKT 578
++W++LLG+CR+ GN E+G+ A ++++ PHD Y+ LSN+YA++ W +V+ +R
Sbjct: 443 DVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLR 502
Query: 579 MKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTDFV 638
MK+K I K+ G S I+++ +H+F V D SHP+A++I L E++ K++ GY P T V
Sbjct: 503 MKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQV 562
Query: 639 LHDVEDEQKEQYLFQHSEKIAVAFALISIPNPKPIRIFKNLRVCGDCHTAIKYISKVTGR 698
L ++E+E KE L HSEKIA AF LIS KPIRI KNLR+C DCH++IK ISKV R
Sbjct: 563 LLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKR 622
Query: 699 VIVVRDANRFHHIKDGTCSCNDYW 722
I VRD RFHH +DG+CSC DYW
Sbjct: 623 KITVRDRKRFHHFQDGSCSCMDYW 646
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 172/352 (48%), Gaps = 55/352 (15%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVT---FLDMLEHGFY-PNEYCFTAALRACSNSLYFS 59
+R+ SW +++ F+ S E +AL+ F +M+ F PN + F + L+AC+ +
Sbjct: 87 QRNCFSWNTIIRGFSE-SDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQ 145
Query: 60 VGRVVFGSVLKTGY--------------------------------------------FD 75
G+ + G LK G+ D
Sbjct: 146 EGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRD 205
Query: 76 SHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFR 135
+ + +ID +++ GD ++A +F+KM++R+VV+WN M++ ++ G+ +D++++F
Sbjct: 206 GEIVLWNVMIDGYMR-LGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFRE 264
Query: 136 MLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAV 195
M P+ TL S L A + L L +G+ LH + SG+ +D +G +L+DMY+KC
Sbjct: 265 MKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKC-- 322
Query: 196 DGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSS 255
G + + VF +P NV++W+A+I G+ GQ +A+ FC M Q V P+ + +
Sbjct: 323 -GIIEKAIHVFERLPRENVITWSAMINGFAI-HGQAGDAIDCFCKMRQAGVRPSDVAYIN 380
Query: 256 VLKACANLPDFGFGEQLHSQTIKL-GLSAVNCVANSLINMYARSGRLECARK 306
+L AC++ G + SQ + + GL ++++ RSG L+ A +
Sbjct: 381 LLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEE 432
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/431 (23%), Positives = 186/431 (43%), Gaps = 86/431 (19%)
Query: 94 DIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPED----SIDLFFRMLLSGYT-PDRFTL 148
D++ AH++F +M +RN +WN ++ F++ ED +I LF+ M+ + P+RFT
Sbjct: 74 DLDYAHKIFNQMPQRNCFSWNTIIRGFSE--SDEDKALIAITLFYEMMSDEFVEPNRFTF 131
Query: 149 TSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAV------------- 195
S L ACA+ + GKQ+H ++ G D V +LV MY C
Sbjct: 132 PSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNII 191
Query: 196 -------------DGSLV----------------DSRRVFNSMPEHNVVSWTALIAGYVR 226
DG +V +R +F+ M + +VVSW +I+GY
Sbjct: 192 EKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSL 251
Query: 227 GSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNC 286
+G ++A+ +F +M +G++ PN T SVL A + L GE LH G+ +
Sbjct: 252 -NGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDV 310
Query: 287 VANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETE-HTTG 345
+ ++LI+MY++ G +E A F+ L +++++ +++ + + ++ + G
Sbjct: 311 LGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAG 370
Query: 346 IGACSFTYACLLSGAACIGTIGKGEQIHALVVK-SGFETNLSINNALISMYSKCGNKEAA 404
+ Y LL+ + G + +G + + +V G E + ++ + + G + A
Sbjct: 371 VRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEA 430
Query: 405 LQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHV 464
+ +L +KP+DV + A+L AC
Sbjct: 431 EEF----------------------------------ILNMPIKPDDVIWKALLGACRMQ 456
Query: 465 GLIDEGWKHFN 475
G ++ G + N
Sbjct: 457 GNVEMGKRVAN 467
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 117/241 (48%), Gaps = 18/241 (7%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
+R +VSW +M+S ++ N +A+ F +M + PN + L A S +G +
Sbjct: 236 QRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISR-----LGSL 290
Query: 64 VFGSVLKTGYFDSHVSV----GCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTR 119
G L DS + + G LIDM+ K CG IE A VFE++ NV+TW+ M+
Sbjct: 291 ELGEWLHLYAEDSGIRIDDVLGSALIDMYSK-CGIIEKAIHVFERLPRENVITWSAMING 349
Query: 120 FAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIR-SGLAL 178
FA G D+ID F +M +G P + LTAC+ L+ G++ S ++ GL
Sbjct: 350 FAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEP 409
Query: 179 DL-CVGCSLVDMYAKCAVDGSLVDSRRVFNSMP-EHNVVSWTALIAGYVRGSGQEQEAMR 236
+ GC +VD+ + G L ++ +MP + + V W AL+ G R G + R
Sbjct: 410 RIEHYGC-MVDLLGRS---GLLDEAEEFILNMPIKPDDVIWKALL-GACRMQGNVEMGKR 464
Query: 237 L 237
+
Sbjct: 465 V 465
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 428 bits (1101), Expect = e-120, Method: Compositional matrix adjust.
Identities = 225/591 (38%), Positives = 343/591 (58%), Gaps = 39/591 (6%)
Query: 166 QLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYV 225
Q+H+ ++R L L + ++ A G + S +F+ + ++ +TA I
Sbjct: 47 QIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAI-NTA 105
Query: 226 RGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVN 285
+G + +A L+ +L + PN FTFSS+LK+C+ G+ +H+ +K GL
Sbjct: 106 SINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS----GKLIHTHVLKFGLGIDP 161
Query: 286 CVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDET---------- 335
VA L+++YA+ G + A+K FD + E+SLVS ++ + N +
Sbjct: 162 YVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCER 221
Query: 336 --------LNHETEHTTGIGAC---------------SFTYACLLSGAACIGTIGKGEQI 372
++ +H A T LS + IG + G I
Sbjct: 222 DIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWI 281
Query: 373 HALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYA 432
H V S N+ + LI MYSKCG+ E A+ VFND ++++ W ++I+G+A HGY+
Sbjct: 282 HVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYS 341
Query: 433 TKALELFYEMLE-TGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYA 491
AL LF EM TG++P D+T+I L AC+H GL++EG + F SM +G+ P++EHY
Sbjct: 342 QDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYG 401
Query: 492 CMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPH 551
C+V +LGR+G L A E I +M +DAD+++W S+LGSC++HG+ LG+ A+ ++
Sbjct: 402 CLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIK 461
Query: 552 DPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQ 611
+ Y+LLSN+YA+ + VA +R MK+K I+KE G S IE+EN+VH+F GD H +
Sbjct: 462 NSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSK 521
Query: 612 AQKIYDELDELASKIKKLGYVPNTDFVLHDVEDEQKEQYLFQHSEKIAVAFALISIPNPK 671
+++IY L +++ +IK GYVPNT+ VL D+E+ +KEQ L HSE++A+A+ LIS
Sbjct: 522 SKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGS 581
Query: 672 PIRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGTCSCNDYW 722
P++IFKNLRVC DCHT K ISK+TGR IV+RD NRFHH DG+CSC D+W
Sbjct: 582 PLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 128/457 (28%), Positives = 222/457 (48%), Gaps = 90/457 (19%)
Query: 6 DLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVF 65
DL + + ++ + N ++ +A + ++ +L PNE+ F++ L++CS G+++
Sbjct: 94 DLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTK----SGKLIH 149
Query: 66 GSVLKTGY-FDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQER---------------- 108
VLK G D +V+ G L+D++ KG GD+ SA +VF++M ER
Sbjct: 150 THVLKFGLGIDPYVATG--LVDVYAKG-GDVVSAQKVFDRMPERSLVSSTAMITCYAKQG 206
Query: 109 ---------------NVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYT-PDRFTLTSAL 152
++V+WN+M+ +AQ G+P D++ LF ++L G PD T+ +AL
Sbjct: 207 NVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAAL 266
Query: 153 TACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH 212
+AC+++ L G+ +H +V S + L++ V L+DMY+KC GSL ++ VFN P
Sbjct: 267 SACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKC---GSLEEAVLVFNDTPRK 323
Query: 213 NVVSWTALIAGYVRGSGQEQEAMRLFCDMLQG--NVAPNGFTFSSVLKACAN--LPDFG- 267
++V+W A+IAGY G Q+A+RLF +M QG + P TF L+ACA+ L + G
Sbjct: 324 DIVAWNAMIAGYAM-HGYSQDALRLFNEM-QGITGLQPTDITFIGTLQACAHAGLVNEGI 381
Query: 268 --FGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDV 325
F IK + C L+++ R+G+L+ A ETI
Sbjct: 382 RIFESMGQEYGIKPKIEHYGC----LVSLLGRAGQLKRAY--------------ETI--- 420
Query: 326 IVRDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNL 385
+++N D A S ++ +L G G++I ++ + N
Sbjct: 421 --KNMNMD--------------ADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIK-NS 463
Query: 386 SINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSI 422
I L ++Y+ G+ E +V N M ++ ++ I
Sbjct: 464 GIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGI 500
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 180/410 (43%), Gaps = 47/410 (11%)
Query: 93 GDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSAL 152
G I + +F + + ++ + + + G + + L+ ++L S P+ FT +S L
Sbjct: 78 GKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLL 137
Query: 153 TACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKC------------------- 193
+C+ GK +H+ V++ GL +D V LVD+YAK
Sbjct: 138 KSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLV 193
Query: 194 ---------AVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDML-Q 243
A G++ +R +F+SM E ++VSW +I GY + G +A+ LF +L +
Sbjct: 194 SSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQ-HGFPNDALMLFQKLLAE 252
Query: 244 GNVAPNGFTFSSVLKACANLPDFGFGEQLH----SQTIKLGLSAVNCVANSLINMYARSG 299
G P+ T + L AC+ + G +H S I+L + V LI+MY++ G
Sbjct: 253 GKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVK----VCTGLIDMYSKCG 308
Query: 300 RLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN--HETEHTTGIGACSFTYACLL 357
LE A F+ K +V+ ++ S + L +E + TG+ T+ L
Sbjct: 309 SLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTL 368
Query: 358 SGAACIGTIGKGEQI-HALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMG-DRN 415
A G + +G +I ++ + G + + L+S+ + G + A + +M D +
Sbjct: 369 QACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDAD 428
Query: 416 VITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVG 465
+ W+S++ HG E+ ++ +K N Y+ + + + VG
Sbjct: 429 SVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIK-NSGIYVLLSNIYASVG 477
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 141/321 (43%), Gaps = 52/321 (16%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHG-FYPNEYCFTAALRACSNSLYFSVGR 62
+RD+VSW M+ +A + ++AL+ F +L G P+E AAL ACS GR
Sbjct: 220 ERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGR 279
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
+ V K+ +V V LIDM+ K CG +E A VF +++V WN M+ +A
Sbjct: 280 WIHVFV-KSSRIRLNVKVCTGLIDMYSK-CGSLEEAVLVFNDTPRKDIVAWNAMIAGYAM 337
Query: 123 MGYPEDSIDLFFRML-LSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLC 181
GY +D++ LF M ++G P T L ACA H+ ++ G+
Sbjct: 338 HGYSQDALRLFNEMQGITGLQPTDITFIGTLQACA-----------HAGLVNEGI----- 381
Query: 182 VGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH-----NVVSWTALIAGYVRGSGQEQEAMR 236
R+F SM + + + L++ R +GQ + A
Sbjct: 382 ----------------------RIFESMGQEYGIKPKIEHYGCLVSLLGR-AGQLKRAYE 418
Query: 237 LFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYA 296
+M N+ + +SSVL +C DF G+++ I L + + + L N+YA
Sbjct: 419 TIKNM---NMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKN-SGIYVLLSNIYA 474
Query: 297 RSGRLECARKCFDLLFEKSLV 317
G E K +L+ EK +V
Sbjct: 475 SVGDYEGVAKVRNLMKEKGIV 495
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 427 bits (1097), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/539 (40%), Positives = 337/539 (62%), Gaps = 6/539 (1%)
Query: 186 LVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGN 245
L++ Y + G LV++R+VF+ MP+ + +W A+IAG ++ E E + LF +M
Sbjct: 31 LINGYVRA---GDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNE-EGLSLFREMHGLG 86
Query: 246 VAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECAR 305
+P+ +T SV A L G+Q+H TIK GL V +SL +MY R+G+L+
Sbjct: 87 FSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGE 146
Query: 306 KCFDLLFEKSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGAACIG 364
+ ++LV+ T++ ++ + L ++ +G T+ +LS + +
Sbjct: 147 IVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLA 206
Query: 365 TIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIIS 424
G+G+QIHA +K G + +++ ++LISMYSKCG A + F++ D + + W+S+IS
Sbjct: 207 IRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMIS 266
Query: 425 GFAKHGYATKALELFYEMLE-TGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGV 483
+ HG +A+ELF M E T ++ N+V ++ +L ACSH GL D+G + F+ M +G
Sbjct: 267 AYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGF 326
Query: 484 VPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAK 543
P ++HY C+VD+LGR+G L +A I SMP+ D ++W++LL +C +H N E+ + K
Sbjct: 327 KPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFK 386
Query: 544 MILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFH 603
IL+ +P+D A Y+LL+N++A+ +RW DV+ +RK+M+ K + KEAG SW E + +VH+F
Sbjct: 387 EILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFK 446
Query: 604 VGDTSHPQAQKIYDELDELASKIKKLGYVPNTDFVLHDVEDEQKEQYLFQHSEKIAVAFA 663
+GD S ++++IY L EL ++K GY P+T VLHD+++E+KE L QHSEK+AVAFA
Sbjct: 447 MGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFA 506
Query: 664 LISIPNPKPIRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGTCSCNDYW 722
L+ +P PIRI KNLRVC DCH A KYIS + R I +RD +RFHH +G CSC DYW
Sbjct: 507 LMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 565
Score = 175 bits (444), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 124/402 (30%), Positives = 202/402 (50%), Gaps = 24/402 (5%)
Query: 58 FSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMM 117
F V+G + K Y S++ LI+ +V+ GD+ +A +VF++M +R + TWN M+
Sbjct: 10 FPSAVAVYGRMRKKNYMSSNI-----LINGYVRA-GDLVNARKVFDEMPDRKLTTWNAMI 63
Query: 118 TRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLA 177
Q + E+ + LF M G++PD +TL S + A L +S+G+Q+H + I+ GL
Sbjct: 64 AGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLE 123
Query: 178 LDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRL 237
LDL V SL MY + +G L D V SMP N+V+W LI G + +G + + L
Sbjct: 124 LDLVVNSSLAHMYMR---NGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQ-NGCPETVLYL 179
Query: 238 FCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYAR 297
+ M PN TF +VL +C++L G G+Q+H++ IK+G S+V V +SLI+MY++
Sbjct: 180 YKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSK 239
Query: 298 SGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETL---NHETEHT----TGIGACS 350
G L A K F ++ V +++ DE + N E T + +
Sbjct: 240 CGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLN 299
Query: 351 FTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFND 410
YAC SG G E +V K GF+ L ++ + + G + A +
Sbjct: 300 LLYACSHSGLKDKGL----ELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRS 355
Query: 411 MGDR-NVITWTSIISGFAKHGYATKALELFYEMLETGVKPND 451
M + +++ W +++S H A A +F E+L+ + PND
Sbjct: 356 MPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQ--IDPND 395
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 160/327 (48%), Gaps = 23/327 (7%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
R L +W +M++ E L F +M GF P+EY + + S+G+ +
Sbjct: 54 RKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQI 113
Query: 65 FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG 124
G +K G + + V L M+++ G ++ V M RN+V WN ++ AQ G
Sbjct: 114 HGYTIKYG-LELDLVVNSSLAHMYMRN-GKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNG 171
Query: 125 YPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGC 184
PE + L+ M +SG P++ T + L++C++L + G+Q+H+ I+ G + + V
Sbjct: 172 CPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVS 231
Query: 185 SLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDML-Q 243
SL+ MY+KC G L D+ + F+ + + V W+++I+ Y GQ EA+ LF M Q
Sbjct: 232 SLISMYSKC---GCLGDAAKAFSEREDEDEVMWSSMISAY-GFHGQGDEAIELFNTMAEQ 287
Query: 244 GNVAPNGFTFSSVLKACAN--LPDFG---FGEQLHSQTIKLGLSAVNCVANSLINMYARS 298
N+ N F ++L AC++ L D G F + K GL CV +++ R+
Sbjct: 288 TNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCV----VDLLGRA 343
Query: 299 GRLECARKCF-------DLLFEKSLVS 318
G L+ A D++ K+L+S
Sbjct: 344 GCLDQAEAIIRSMPIKTDIVIWKTLLS 370
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 424 bits (1090), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/624 (36%), Positives = 357/624 (57%), Gaps = 43/624 (6%)
Query: 135 RMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCA 194
++L P T + + C++ L GK++H + SG + + L+ MYAKC
Sbjct: 75 QLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKC- 133
Query: 195 VDGSLVDSRRVFNSMP-------------------------------EHNVVSWTALIAG 223
GSLVD+R+VF+ MP E + SWTA++ G
Sbjct: 134 --GSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTG 191
Query: 224 YVRGSGQEQEAMRLFCDMLQ-GNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLS 282
YV+ Q +EA+ L+ M + N PN FT S + A A + G+++H ++ GL
Sbjct: 192 YVK-KDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLD 250
Query: 283 AVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEH 342
+ + +SL++MY + G ++ AR FD + EK +VS +++D + E + +E
Sbjct: 251 SDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSEL 310
Query: 343 TTGIGACS----FTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKC 398
+G+C +T+A +L+ A + T G+Q+H + + GF+ +++L+ MY+KC
Sbjct: 311 ---VGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKC 367
Query: 399 GNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVL 458
GN E+A V + ++++WTS+I G A++G +AL+ F +L++G KP+ VT++ VL
Sbjct: 368 GNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVL 427
Query: 459 SACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDAD 518
SAC+H GL+++G + F S+ H + +HY C+VD+L RSG + I+ MP+
Sbjct: 428 SACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPS 487
Query: 519 AMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKT 578
+W S+LG C +GN +L E AA+ + + EP +P TY+ ++N+YA +W + +RK
Sbjct: 488 KFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKR 547
Query: 579 MKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTDFV 638
M++ + K G SW E++ + H F DTSHP +I + L EL K+K+ GYVP T V
Sbjct: 548 MQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLV 607
Query: 639 LHDVEDEQKEQYLFQHSEKIAVAFALISIPNPKPIRIFKNLRVCGDCHTAIKYISKVTGR 698
LHDVEDEQKE+ L HSEK+AVAFA++S I++FKNLR C DCH AIK+IS +T R
Sbjct: 608 LHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKR 667
Query: 699 VIVVRDANRFHHIKDGTCSCNDYW 722
I VRD+ RFH ++G CSC DYW
Sbjct: 668 KITVRDSTRFHCFENGQCSCGDYW 691
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/492 (25%), Positives = 236/492 (47%), Gaps = 45/492 (9%)
Query: 31 LDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVK 90
+ +L P + ++ CS + G+ V + +G+ + + L+ M+ K
Sbjct: 74 VQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPG-IVIWNRLLRMYAK 132
Query: 91 GCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRM----------LLSG 140
CG + A +VF++M R++ +WN+M+ +A++G E++ LF M +++G
Sbjct: 133 -CGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTG 191
Query: 141 YT----------------------PDRFTLTSALTACAELELLSVGKQLHSWVIRSGLAL 178
Y P+ FT++ A+ A A ++ + GK++H ++R+GL
Sbjct: 192 YVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDS 251
Query: 179 DLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLF 238
D + SL+DMY KC G + ++R +F+ + E +VVSWT++I Y + S + +E LF
Sbjct: 252 DEVLWSSLMDMYGKC---GCIDEARNIFDKIVEKDVVSWTSMIDRYFK-SSRWREGFSLF 307
Query: 239 CDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARS 298
+++ PN +TF+ VL ACA+L G+Q+H ++G + ++SL++MY +
Sbjct: 308 SELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKC 367
Query: 299 GRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNH-ETEHTTGIGACSFTYACLL 357
G +E A+ D + LVS +++ ++ DE L + + +G T+ +L
Sbjct: 368 GNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVL 427
Query: 358 SGAACIGTIGKG-EQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDR-N 415
S G + KG E +++ K L+ + ++ G E V ++M + +
Sbjct: 428 SACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPS 487
Query: 416 VITWTSIISGFAKHGYATKALELFYEMLETGVKP-NDVTYIAVLSACSHVGLIDEGWKHF 474
W S++ G + +G A E E+ + ++P N VTY+ + + + G +E K
Sbjct: 488 KFLWASVLGGCSTYGNIDLAEEAAQELFK--IEPENPVTYVTMANIYAAAGKWEEEGKMR 545
Query: 475 NSMRHCHGVVPR 486
M+ GV R
Sbjct: 546 KRMQEI-GVTKR 556
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/303 (32%), Positives = 160/303 (52%), Gaps = 10/303 (3%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLE-HGFYPNEYCFTAALRACSNSLYFSVG 61
+++D SW +M++ + EALV + M PN + + A+ A + G
Sbjct: 178 TEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRG 237
Query: 62 RVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFA 121
+ + G +++ G DS + L+DM+ K CG I+ A +F+K+ E++VV+W M+ R+
Sbjct: 238 KEIHGHIVRAG-LDSDEVLWSSLMDMYGK-CGCIDEARNIFDKIVEKDVVSWTSMIDRYF 295
Query: 122 QMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLC 181
+ + LF ++ S P+ +T L ACA+L +GKQ+H ++ R G
Sbjct: 296 KSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSF 355
Query: 182 VGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDM 241
SLVDMY KC G++ ++ V + P+ ++VSWT+LI G + +GQ EA++ F +
Sbjct: 356 ASSSLVDMYTKC---GNIESAKHVVDGCPKPDLVSWTSLIGGCAQ-NGQPDEALKYFDLL 411
Query: 242 LQGNVAPNGFTFSSVLKAC--ANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSG 299
L+ P+ TF +VL AC A L + G E +S T K LS + L+++ ARSG
Sbjct: 412 LKSGTKPDHVTFVNVLSACTHAGLVEKGL-EFFYSITEKHRLSHTSDHYTCLVDLLARSG 470
Query: 300 RLE 302
R E
Sbjct: 471 RFE 473
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 419 bits (1078), Expect = e-117, Method: Compositional matrix adjust.
Identities = 234/754 (31%), Positives = 398/754 (52%), Gaps = 71/754 (9%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
KRD ++W ++ + +A+ F +M G + L+ CSN F+ GR
Sbjct: 51 KRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQ 110
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
+ G VL+ G +S+VS+ LI M+ + G +E + +VF M++RN+ +WN +++ + ++
Sbjct: 111 IHGYVLRLG-LESNVSMCNSLIVMYSRN-GKLELSRKVFNSMKDRNLSSWNSILSSYTKL 168
Query: 124 GYPEDSIDLFFRM--------------LLSGYT---------------------PDRFTL 148
GY +D+I L M LLSGY P ++
Sbjct: 169 GYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSI 228
Query: 149 TSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNS 208
+S L A AE L +GK +H +++R+ L D+ V +L+DMY K G L +R VF+
Sbjct: 229 SSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKT---GYLPYARMVFDM 285
Query: 209 MPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGF 268
M N+V+W +L++G + + ++A L M + + P+ T++S+ A L
Sbjct: 286 MDAKNIVAWNSLVSG-LSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEK 344
Query: 269 GEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVR 328
+ + + G++ ++ + +++G A K F + E+
Sbjct: 345 ALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEE-------------- 390
Query: 329 DLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSIN 388
G+G + T + LL C+ + G+++H ++ + +
Sbjct: 391 ----------------GVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVA 434
Query: 389 NALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVK 448
AL+ MY K G+ ++A+++F + ++++ +W ++ G+A G + + F MLE G++
Sbjct: 435 TALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGME 494
Query: 449 PNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIE 508
P+ +T+ +VLS C + GL+ EGWK+F+ MR +G++P +EH +CMVD+LGRSG L EA +
Sbjct: 495 PDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWD 554
Query: 509 FINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEER 568
FI +M L DA +W + L SC++H + EL E A K + EPH+ A Y+++ NLY+ R
Sbjct: 555 FIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNR 614
Query: 569 WYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELDELASKIKK 628
W DV IR M+ ++ + +SWI+++ VH F+ +HP IY EL +L S++KK
Sbjct: 615 WEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKK 674
Query: 629 LGYVPNTDFVLHDVEDEQKEQYLFQHSEKIAVAFALISIPNPKPIRIFKNLRVCGDCHTA 688
GYVP+T + D+ D +KE+ L H+EK+A+ + LI PIR+ KN +C D HT
Sbjct: 675 SGYVPDTSCIHQDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICSDSHTV 734
Query: 689 IKYISKVTGRVIVVRDANRFHHIKDGTCSCNDYW 722
KY+S + R IV+++ R HH +DG CSCND W
Sbjct: 735 AKYMSVLRNREIVLQEGARVHHFRDGKCSCNDSW 768
Score = 164 bits (416), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 141/548 (25%), Positives = 244/548 (44%), Gaps = 95/548 (17%)
Query: 56 LYFSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNL 115
+Y +G + G ++K G +S V + + + C + A+++F++M +R+ + WN
Sbjct: 1 MYRFLGLTIHGGLIKRGLDNSDTRVVSASMGFYGR-CVSLGFANKLFDEMPKRDDLAWNE 59
Query: 116 MMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSG 175
++ + G E +++LF M SG T+ L C+ E + G+Q+H +V+R G
Sbjct: 60 IVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLG 119
Query: 176 LALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVR--------- 226
L ++ + SL+ MY++ +G L SR+VFNSM + N+ SW ++++ Y +
Sbjct: 120 LESNVSMCNSLIVMYSR---NGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIG 176
Query: 227 -------------------------GSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACA 261
G ++A+ + M + P+ + SS+L+A A
Sbjct: 177 LLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVA 236
Query: 262 NLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCET 321
G+ +H ++ L V +LI+MY ++G L AR FD++ K++V+ +
Sbjct: 237 EPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNS 296
Query: 322 IVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGF 381
+V +YACLL A E + + K G
Sbjct: 297 LVS-------------------------GLSYACLLKDA---------EALMIRMEKEGI 322
Query: 382 ETNLSINNALISMYSKCGNKEAALQVFNDMGDR----NVITWTSIISGFAKHGYATKALE 437
+ + N+L S Y+ G E AL V M ++ NV++WT+I SG +K+G AL+
Sbjct: 323 KPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALK 382
Query: 438 LFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYAC----- 492
+F +M E GV PN T +L + L+ G + HG R ++ C
Sbjct: 383 VFIKMQEEGVGPNAATMSTLLKILGCLSLLHSG-------KEVHGFCLR-KNLICDAYVA 434
Query: 493 --MVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILE--R 548
+VD+ G+SG L AIE + + W +L + G E G A ++LE
Sbjct: 435 TALVDMYGKSGDLQSAIEIFWGIK-NKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGM 493
Query: 549 EPHDPATY 556
EP D T+
Sbjct: 494 EP-DAITF 500
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 142/332 (42%), Gaps = 78/332 (23%)
Query: 2 GSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVG 61
G K D+V+W S++S +A+ + +A+ M G P+ ++ L+A + + +G
Sbjct: 185 GLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLG 244
Query: 62 RVVFGSVLKTG-YFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVV--------- 111
+ + G +L+ ++D +V LIDM++K G + A VF+ M +N+V
Sbjct: 245 KAIHGYILRNQLWYDVYVET--TLIDMYIK-TGYLPYARMVFDMMDAKNIVAWNSLVSGL 301
Query: 112 --------------------------TWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDR 145
TWN + + +A +G PE ++D+ +M G P+
Sbjct: 302 SYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNV 361
Query: 146 FTLTSALTACAE-----------------------------------LELLSVGKQLHSW 170
+ T+ + C++ L LL GK++H +
Sbjct: 362 VSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGF 421
Query: 171 VIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQ 230
+R L D V +LVDMY K G L + +F + ++ SW ++ GY G+
Sbjct: 422 CLRKNLICDAYVATALVDMYGK---SGDLQSAIEIFWGIKNKSLASWNCMLMGYAM-FGR 477
Query: 231 EQEAMRLFCDMLQGNVAPNGFTFSSVLKACAN 262
+E + F ML+ + P+ TF+SVL C N
Sbjct: 478 GEEGIAAFSVMLEAGMEPDAITFTSVLSVCKN 509
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 419 bits (1078), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/612 (38%), Positives = 341/612 (55%), Gaps = 41/612 (6%)
Query: 147 TLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVF 206
+L S L C L + KQ+H V+R GL + L+ K V +RRV
Sbjct: 51 SLISKLDDCINLNQI---KQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPY-ARRVI 106
Query: 207 NSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDF 266
+ N WTA+I GY G+ EA+ ++ M + + P FTFS++LKAC + D
Sbjct: 107 EPVQFRNPFLWTAVIRGYAI-EGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDL 165
Query: 267 GFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVI 326
G Q H+QT +L V N++I+MY + ++CARK FD + E+ ++S ++
Sbjct: 166 NLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAY 225
Query: 327 VR-------------------------------DLNSDETLNH-ETEHTTGIGACSFTYA 354
R + E L + + +GI A T A
Sbjct: 226 ARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVA 285
Query: 355 CLLSGAACIGTIGKGEQIHALVVKSGFETN--LSINNALISMYSKCGNKEAALQVFNDMG 412
+S A +G ++ + KSG+ + + I +ALI MYSKCGN E A+ VF M
Sbjct: 286 GYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMN 345
Query: 413 DRNVITWTSIISGFAKHGYATKALELFYEML-ETGVKPNDVTYIAVLSACSHVGLIDEGW 471
++NV T++S+I G A HG A +AL LF+ M+ +T +KPN VT++ L ACSH GL+D+G
Sbjct: 346 NKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGR 405
Query: 472 KHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRV 531
+ F+SM GV P +HY CMVD+LGR+G L EA+E I +M ++ VW +LLG+CR+
Sbjct: 406 QVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRI 465
Query: 532 HGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYS 591
H N E+ E AA+ + E EP YILLSN+YA+ W V +RK +K+K + K S
Sbjct: 466 HNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVS 525
Query: 592 WIEVEN-QVHKFHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTDFVLHDVEDEQKEQY 650
W+ +N Q+HKF G+ +HP + KI D+L+EL ++ LGY P+ V +DV D K
Sbjct: 526 WVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLI 585
Query: 651 LFQHSEKIAVAFALISIPNPKPIRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHH 710
L QH+EK+A+AF+L++ I I KNLR+C DCH ++ S+VTG+VI++RD RFHH
Sbjct: 586 LIQHTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHH 645
Query: 711 IKDGTCSCNDYW 722
+ G CSC D+W
Sbjct: 646 FRSGDCSCGDFW 657
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 157/335 (46%), Gaps = 41/335 (12%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
R+ W +++ +A EA+ + M + P + F+A L+AC ++GR
Sbjct: 112 RNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQF 171
Query: 65 FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVT------------ 112
+ F V VG +IDM+VK C I+ A +VF++M ER+V++
Sbjct: 172 HAQTFRLRGF-CFVYVGNTMIDMYVK-CESIDCARKVFDEMPERDVISWTELIAAYARVG 229
Query: 113 -------------------WNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALT 153
W M+T FAQ P+++++ F RM SG D T+ ++
Sbjct: 230 NMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYIS 289
Query: 154 ACAELELLSVGKQLHSWVIRSGLALD--LCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPE 211
ACA+L + +SG + + +G +L+DMY+KC G++ ++ VF SM
Sbjct: 290 ACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKC---GNVEEAVNVFMSMNN 346
Query: 212 HNVVSWTALIAGYVRGSGQEQEAMRLFCDML-QGNVAPNGFTFSSVLKACANLPDFGFGE 270
NV +++++I G + G+ QEA+ LF M+ Q + PN TF L AC++ G
Sbjct: 347 KNVFTYSSMILG-LATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGR 405
Query: 271 QLHSQTIK-LGLSAVNCVANSLINMYARSGRLECA 304
Q+ + G+ ++++ R+GRL+ A
Sbjct: 406 QVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEA 440
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 170/386 (44%), Gaps = 40/386 (10%)
Query: 62 RVVFGSVLKTGYFDSHVSVGCELIDMFVK-GCGDIESAHRVFEKMQERNVVTWNLMMTRF 120
+ + G VL+ G D + +LI K G A RV E +Q RN W ++ +
Sbjct: 66 KQIHGHVLRKG-LDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGY 124
Query: 121 AQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDL 180
A G +++I ++ M TP FT ++ L AC ++ L++G+Q H+ R +
Sbjct: 125 AIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFV 184
Query: 181 CVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQE--------- 231
VG +++DMY KC S+ +R+VF+ MPE +V+SWT LIA Y R E
Sbjct: 185 YVGNTMIDMYVKCE---SIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESL 241
Query: 232 ---------------------QEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGE 270
QEA+ F M + + + T + + ACA L + +
Sbjct: 242 PTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYAD 301
Query: 271 QLHSQTIKLGLSAVN--CVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVR 328
+ K G S + + ++LI+MY++ G +E A F + K++ + +++ +
Sbjct: 302 RAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLAT 361
Query: 329 DLNSDETLN--HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKS-GFETNL 385
+ E L+ H T I + T+ L + G + +G Q+ + ++ G +
Sbjct: 362 HGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTR 421
Query: 386 SINNALISMYSKCGNKEAALQVFNDM 411
++ + + G + AL++ M
Sbjct: 422 DHYTCMVDLLGRTGRLQEALELIKTM 447
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 418 bits (1075), Expect = e-117, Method: Compositional matrix adjust.
Identities = 235/654 (35%), Positives = 373/654 (57%), Gaps = 44/654 (6%)
Query: 98 AHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRM----------LLSGYTPDRFT 147
A ++F++M +RN+++WN +++ + + G +++ +F M L+ GY +
Sbjct: 67 ARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHN--- 123
Query: 148 LTSALTACAELELLSVGKQLHSWVI------RSGLALDLCVGCSLV---DMYAKCAV--- 195
+ L K SW + + G D C ++ D A+ ++
Sbjct: 124 --GKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHG 181
Query: 196 ---DGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFT 252
+G + ++R +F+ M E +V++WT ++ GY G + R D++ +
Sbjct: 182 LCKEGRVDEAREIFDEMSERSVITWTTMVTGY--GQNNRVDDARKIFDVMPEKTE---VS 236
Query: 253 FSSVLKACANLPDFGFGEQLHS-QTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLL 311
++S+L E+L +K + C N++I+ + G + AR+ FD +
Sbjct: 237 WTSMLMGYVQNGRIEDAEELFEVMPVK---PVIAC--NAMISGLGQKGEIAKARRVFDSM 291
Query: 312 FEKSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGAACIGTIGKGE 370
E++ S +T++ + R+ E L+ G+ T +LS A + ++ G+
Sbjct: 292 KERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGK 351
Query: 371 QIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHG 430
Q+HA +V+ F+ ++ + + L++MY KCG + +F+ +++I W SIISG+A HG
Sbjct: 352 QVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHG 411
Query: 431 YATKALELFYEMLETG-VKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEH 489
+AL++F EM +G KPN+VT++A LSACS+ G+++EG K + SM GV P H
Sbjct: 412 LGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAH 471
Query: 490 YACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILERE 549
YACMVD+LGR+G +EA+E I+SM ++ DA VW SLLG+CR H ++ E AK ++E E
Sbjct: 472 YACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIE 531
Query: 550 PHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGD-TS 608
P + TYILLSN+YA++ RW DVA +RK MK + + K G SW EVEN+VH F G S
Sbjct: 532 PENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINS 591
Query: 609 HPQAQKIYDELDELASKIKKLGYVPNTDFVLHDVEDEQKEQYLFQHSEKIAVAFALISIP 668
HP+ + I LDEL +++ GY P+ + LHDV++E+K L HSE++AVA+AL+ +
Sbjct: 592 HPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLS 651
Query: 669 NPKPIRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGTCSCNDYW 722
PIR+ KNLRVC DCHTAIK ISKV R I++RDANRFHH ++G CSC DYW
Sbjct: 652 EGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 151/309 (48%), Gaps = 16/309 (5%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR 62
S+R +++W +M++ + N+ +A F M E E +T+ L Y GR
Sbjct: 199 SERSVITWTTMVTGYGQNNRVDDARKIFDVMPEK----TEVSWTSMLMG-----YVQNGR 249
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
+ L + C + + G+I A RVF+ M+ERN +W ++ +
Sbjct: 250 IEDAEEL-FEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHER 308
Query: 123 MGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCV 182
G+ +++DLF M G P TL S L+ CA L L GKQ+H+ ++R +D+ V
Sbjct: 309 NGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYV 368
Query: 183 GCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDM- 241
L+ MY KC G LV S+ +F+ P +++ W ++I+GY G +EA+++FC+M
Sbjct: 369 ASVLMTMYIKC---GELVKSKLIFDRFPSKDIIMWNSIISGYA-SHGLGEEALKVFCEMP 424
Query: 242 LQGNVAPNGFTFSSVLKACANLPDFGFGEQLH-SQTIKLGLSAVNCVANSLINMYARSGR 300
L G+ PN TF + L AC+ G +++ S G+ + +++M R+GR
Sbjct: 425 LSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGR 484
Query: 301 LECARKCFD 309
A + D
Sbjct: 485 FNEAMEMID 493
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/462 (25%), Positives = 200/462 (43%), Gaps = 77/462 (16%)
Query: 93 GDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSAL 152
G I A ++F+ +++ +WN M+ + P D+ LF M PDR
Sbjct: 31 GKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM------PDR------- 77
Query: 153 TACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH 212
+ SW LV Y K +G + ++R+VF+ MPE
Sbjct: 78 -------------NIISW-------------NGLVSGYMK---NGEIDEARKVFDLMPER 108
Query: 213 NVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQL 272
NVVSWTAL+ GYV +G+ A LF M + N S + L D +
Sbjct: 109 NVVSWTALVKGYVH-NGKVDVAESLFWKMPEKN------KVSWTVMLIGFLQDGRIDDA- 160
Query: 273 HSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNS 332
+ ++ N S+I+ + GR++ AR+ FD + E+S+++ T+V ++
Sbjct: 161 -CKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRV 219
Query: 333 D------ETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQI-HALVVKSGFETNL 385
D + + +TE ++ +L G G I E++ + VK
Sbjct: 220 DDARKIFDVMPEKTE---------VSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIAC-- 268
Query: 386 SINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLET 445
NA+IS + G A +VF+ M +RN +W ++I ++G+ +AL+LF M +
Sbjct: 269 ---NAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQ 325
Query: 446 GVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSE 505
GV+P T I++LS C+ + + G + + C V V + ++ + + G L +
Sbjct: 326 GVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVD-VYVASVLMTMYIKCGELVK 384
Query: 506 AIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILE 547
+ + P D ++W S++ HG LGE A K+ E
Sbjct: 385 SKLIFDRFP-SKDIIMWNSIISGYASHG---LGEEALKVFCE 422
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 112/483 (23%), Positives = 208/483 (43%), Gaps = 52/483 (10%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRA--------CSNSL 56
R+++SW ++S + N EA F M E N +TA ++ + SL
Sbjct: 77 RNIISWNGLVSGYMKNGEIDEARKVFDLMPER----NVVSWTALVKGYVHNGKVDVAESL 132
Query: 57 YFSVGRV--VFGSVLKTGYF-DSHVSVGCELIDMF-----------VKGC---GDIESAH 99
++ + V +V+ G+ D + C+L +M + G G ++ A
Sbjct: 133 FWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAR 192
Query: 100 RVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDR--FTLTSALTACAE 157
+F++M ER+V+TW M+T + Q +D+ +F M P++ + TS L +
Sbjct: 193 EIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM------PEKTEVSWTSMLMGYVQ 246
Query: 158 LELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSW 217
+ ++L + + + C+ M + G + +RRVF+SM E N SW
Sbjct: 247 NGRIEDAEELF-----EVMPVKPVIACNA--MISGLGQKGEIAKARRVFDSMKERNDASW 299
Query: 218 TALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTI 277
+I + R +G E EA+ LF M + V P T S+L CA+L G+Q+H+Q +
Sbjct: 300 QTVIKIHER-NGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLV 358
Query: 278 KLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN 337
+ VA+ L+ MY + G L ++ FD K ++ +I+ +E L
Sbjct: 359 RCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALK 418
Query: 338 H--ETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIH-ALVVKSGFETNLSINNALISM 394
E + T+ LS + G + +G +I+ ++ G + + ++ M
Sbjct: 419 VFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDM 478
Query: 395 YSKCGNKEAALQVFNDMG-DRNVITWTSIISGFAKHGYATKALELFYEMLETGVKP-NDV 452
+ G A+++ + M + + W S++ H A +++E ++P N
Sbjct: 479 LGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIE--IEPENSG 536
Query: 453 TYI 455
TYI
Sbjct: 537 TYI 539
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 130/313 (41%), Gaps = 42/313 (13%)
Query: 288 ANSLINMYARSGRLECARKCFDLLFEKSLVSCETIV-----DVIVRDLNS--DETLNHET 340
AN I +R G++ ARK FD KS+ S ++V +++ RD DE +
Sbjct: 20 ANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNI 79
Query: 341 EHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGN 400
++ L+SG G I + ++ L+ E N+ AL+ Y G
Sbjct: 80 ----------ISWNGLVSGYMKNGEIDEARKVFDLMP----ERNVVSWTALVKGYVHNGK 125
Query: 401 KEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSA 460
+ A +F M ++N ++WT ++ GF + G A +L YEM+ +++ +++
Sbjct: 126 VDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKL-YEMIP---DKDNIARTSMIHG 181
Query: 461 CSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAM 520
G +DE + F+ M + + MV G++ + +A + + MP + +
Sbjct: 182 LCKEGRVDEAREIFDEMSERSVIT-----WTTMVTGYGQNNRVDDARKIFDVMP-EKTEV 235
Query: 521 VWRSLLGSCRVHGNTELGEHAAKMILEREPHDP--ATYILLSNL-----YATEERWYDVA 573
W S+L +G E E + E P P A ++S L A R +D
Sbjct: 236 SWTSMLMGYVQNGRIEDAEE----LFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSM 291
Query: 574 AIRKTMKQKKIIK 586
R + +IK
Sbjct: 292 KERNDASWQTVIK 304
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 417 bits (1072), Expect = e-116, Method: Compositional matrix adjust.
Identities = 224/614 (36%), Positives = 354/614 (57%), Gaps = 15/614 (2%)
Query: 113 WNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVI 172
WN+ + A +SI L+ ML SG +PD F+ L +CA L L G+QLH V
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 173 RSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVS--WTALIAGYVRGSGQ 230
+ G + V +L+ MY KC G + D+R+VF P+ + +S + ALI+GY S +
Sbjct: 81 KGGCETEPFVLTALISMYCKC---GLVADARKVFEENPQSSQLSVCYNALISGYTANS-K 136
Query: 231 EQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANS 290
+A +F M + V+ + T ++ C G LH Q +K GL + V NS
Sbjct: 137 VTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNS 196
Query: 291 LINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRD-LNSDETLNHETEHTTGIGAC 349
I MY + G +E R+ FD + K L++ ++ ++ L D +E ++G+
Sbjct: 197 FITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPD 256
Query: 350 SFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFN 409
FT +LS A +G G ++ LV +GF N+ ++NA ISMY++CGN A VF+
Sbjct: 257 PFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFD 316
Query: 410 DMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDE 469
M +++++WT++I + HG L LF +M++ G++P+ ++ VLSACSH GL D+
Sbjct: 317 IMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDK 376
Query: 470 GWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSC 529
G + F +M+ + + P EHY+C+VD+LGR+G L EA+EFI SMP++ D VW +LLG+C
Sbjct: 377 GLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGAC 436
Query: 530 RVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAG 589
++H N ++ E A ++E EP++ Y+L+SN+Y+ + + IR M+++ K+ G
Sbjct: 437 KIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPG 496
Query: 590 YSWIEVENQVHKFHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTDFVLHDVEDEQKEQ 649
YS++E + +VH F GD SH Q ++++ LDEL + + +L + D E+
Sbjct: 497 YSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGNMDCD------RGEEVSS 550
Query: 650 YLFQHSEKIAVAFALI-SIPNPKPIRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRF 708
+HSE++A+AF ++ SIP + I + KNLRVC DCH +K +SK+ R VVRDA+RF
Sbjct: 551 TTREHSERLAIAFGILNSIPGTE-ILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRF 609
Query: 709 HHIKDGTCSCNDYW 722
H+ KDG CSC DYW
Sbjct: 610 HYFKDGVCSCKDYW 623
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 160/302 (52%), Gaps = 15/302 (4%)
Query: 8 VSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGS 67
V + +++S + NS +A F M E G + + C+ Y +GR + G
Sbjct: 122 VCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQ 181
Query: 68 VLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPE 127
+K G DS V+V I M++K CG +E+ R+F++M + ++TWN +++ ++Q G
Sbjct: 182 CVKGG-LDSEVAVLNSFITMYMK-CGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAY 239
Query: 128 DSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLV 187
D ++L+ +M SG PD FTL S L++CA L +G ++ V +G ++ V + +
Sbjct: 240 DVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASI 299
Query: 188 DMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVA 247
MYA+C G+L +R VF+ MP ++VSWTA+I Y G + + LF DM++ +
Sbjct: 300 SMYARC---GNLAKARAVFDIMPVKSLVSWTAMIGCYGM-HGMGEIGLMLFDDMIKRGIR 355
Query: 248 PNGFTFSSVLKACAN--LPDFG---FGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLE 302
P+G F VL AC++ L D G F ++ G +C L+++ R+GRL+
Sbjct: 356 PDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSC----LVDLLGRAGRLD 411
Query: 303 CA 304
A
Sbjct: 412 EA 413
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 417 bits (1072), Expect = e-116, Method: Compositional matrix adjust.
Identities = 242/680 (35%), Positives = 382/680 (56%), Gaps = 32/680 (4%)
Query: 58 FSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMM 117
S R F S + F +V V D I A ++F+++ + + V++N ++
Sbjct: 59 LSYARAAFYSTEEPNVFSYNVIVKAYAKD------SKIHIARQLFDEIPQPDTVSYNTLI 112
Query: 118 TRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLA 177
+ +A ++ LF RM G+ D FTL+ + AC + + + KQLH + + G
Sbjct: 113 SGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDR--VDLIKQLHCFSVSGGFD 170
Query: 178 LDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPE-HNVVSWTALIAGYVRGSGQEQE--- 233
V + V Y+K G L ++ VF M E + VSW ++I Y GQ +E
Sbjct: 171 SYSSVNNAFVTYYSK---GGLLREAVSVFYGMDELRDEVSWNSMIVAY----GQHKEGAK 223
Query: 234 AMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLIN 293
A+ L+ +M+ + FT +SVL A +L G Q H + IK G + V + LI+
Sbjct: 224 ALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLID 283
Query: 294 MYARSGRLEC---ARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIG--- 347
Y++ G + + K F + LV T++ + E IG
Sbjct: 284 FYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRP 343
Query: 348 -ACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETN-LSINNALISMYSKCGNKEAAL 405
CSF C+ S + + + + +QIH L +KS +N +S+NNALIS+Y K GN + A
Sbjct: 344 DDCSFV--CVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDAR 401
Query: 406 QVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVG 465
VF+ M + N +++ +I G+A+HG+ T+AL L+ ML++G+ PN +T++AVLSAC+H G
Sbjct: 402 WVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCG 461
Query: 466 LIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSL 525
+DEG ++FN+M+ + P EHY+CM+D+LGR+G L EA FI++MP ++ W +L
Sbjct: 462 KVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAAL 521
Query: 526 LGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKII 585
LG+CR H N L E AA ++ +P Y++L+N+YA +W ++A++RK+M+ K+I
Sbjct: 522 LGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIR 581
Query: 586 KEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTDFVL---HDV 642
K+ G SWIEV+ + H F D SHP +++ + L+E+ K+KK+GYV + + + +
Sbjct: 582 KKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEA 641
Query: 643 EDEQKEQYLFQHSEKIAVAFALISIPNPKPIRIFKNLRVCGDCHTAIKYISKVTGRVIVV 702
+ +E L HSEK+AVAF L+S + + + + KNLR+CGDCH AIK++S V GR I+V
Sbjct: 642 GEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIV 701
Query: 703 RDANRFHHIKDGTCSCNDYW 722
RD RFH KDG CSC DYW
Sbjct: 702 RDNLRFHCFKDGKCSCGDYW 721
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 166/318 (52%), Gaps = 14/318 (4%)
Query: 1 MGSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSV 60
M RD VSW SM+ + + +AL + +M+ GF + + + L A ++ +
Sbjct: 199 MDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIG 258
Query: 61 GRVVFGSVLKTGYFDSHVSVGCELIDMFVK--GCGDIESAHRVFEKMQERNVVTWNLMMT 118
GR G ++K G F + VG LID + K GC + + +VF+++ ++V WN M++
Sbjct: 259 GRQFHGKLIKAG-FHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMIS 317
Query: 119 RFA-QMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLA 177
++ E+++ F +M G+ PD + +AC+ L S KQ+H I+S +
Sbjct: 318 GYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIP 377
Query: 178 LD-LCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMR 236
+ + V +L+ +Y K G+L D+R VF+ MPE N VS+ +I GY + G EA+
Sbjct: 378 SNRISVNNALISLYYK---SGNLQDARWVFDRMPELNAVSFNCMIKGYAQ-HGHGTEALL 433
Query: 237 LFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHS---QTIKLGLSAVNCVANSLIN 293
L+ ML +APN TF +VL ACA+ G++ + +T K+ A + + +I+
Sbjct: 434 LYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEH--YSCMID 491
Query: 294 MYARSGRLECARKCFDLL 311
+ R+G+LE A + D +
Sbjct: 492 LLGRAGKLEEAERFIDAM 509
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 152/352 (43%), Gaps = 53/352 (15%)
Query: 245 NVAPNGF-TFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLEC 303
N P F TF +L D G+ LH+ +K +++ ++N +N+Y++ GRL
Sbjct: 2 NQTPWKFKTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSY 61
Query: 304 ARKCFDLLFEKSLVSCETIVDVIVRD------------LNSDETLNHETEHTTGIGACSF 351
AR F E ++ S IV +D + +T+++ T +G
Sbjct: 62 ARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNT-LISGYADARE 120
Query: 352 TYACL-----------------LSG--AACIGTIGKGEQIHALVVKSGFETNLSINNALI 392
T+A + LSG AAC + +Q+H V GF++ S+NNA +
Sbjct: 121 TFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFV 180
Query: 393 SMYSKCGNKEAALQVFNDMGD-RNVITWTSIISGFAKHGYATKALELFYEMLETGVKPND 451
+ YSK G A+ VF M + R+ ++W S+I + +H KAL L+ EM+ G K +
Sbjct: 181 TYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDM 240
Query: 452 VTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHY------ACMVDVLGRSGLLSE 505
T +VL+A + + H R HG + + + + ++D + G
Sbjct: 241 FTLASVLNALTSL-------DHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDG 293
Query: 506 AI--EFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMI--LEREPHDP 553
E + L D +VW +++ + N EL E A K ++R H P
Sbjct: 294 MYDSEKVFQEILSPDLVVWNTMISGYSM--NEELSEEAVKSFRQMQRIGHRP 343
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 417 bits (1071), Expect = e-116, Method: Compositional matrix adjust.
Identities = 224/593 (37%), Positives = 348/593 (58%), Gaps = 37/593 (6%)
Query: 147 TLTSALTACAELELLSVGKQLHSWVIRS-----GLALDLCVGCSLVDMYAKCAVDGSLVD 201
+L +A+ +C +EL + LH V++S G D VGC L + CA
Sbjct: 36 SLIAAVKSCVSIELCRL---LHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCA------- 85
Query: 202 SRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVA--PNGFTFSSVLKA 259
++F+ MPE ++VSW +LI+GY G G + + M+ V PN TF S++ A
Sbjct: 86 -EKLFDEMPERDLVSWNSLISGY-SGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISA 143
Query: 260 CANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSC 319
C G +H +K G+ V N+ IN Y ++G L + K F+ L K+LVS
Sbjct: 144 CVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSW 203
Query: 320 ETIVDVIVRD---------LNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGE 370
T++ + +++ N + HE + T + +L +G + +
Sbjct: 204 NTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQAT--------FLAVLRSCEDMGVVRLAQ 255
Query: 371 QIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHG 430
IH L++ GF N I AL+ +YSK G E + VF+++ + + WT++++ +A HG
Sbjct: 256 GIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHG 315
Query: 431 YATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHY 490
+ A++ F M+ G+ P+ VT+ +L+ACSH GL++EG +F +M + + PR++HY
Sbjct: 316 FGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHY 375
Query: 491 ACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREP 550
+CMVD+LGRSGLL +A I MP++ + VW +LLG+CRV+ +T+LG AA+ + E EP
Sbjct: 376 SCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEP 435
Query: 551 HDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHP 610
D Y++LSN+Y+ W D + IR MKQK +++ +G S+IE N++HKF VGD SHP
Sbjct: 436 RDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHP 495
Query: 611 QAQKIYDELDELASKIK-KLGYVPNTDFVLHDVEDEQKEQYLFQHSEKIAVAFALISIPN 669
+++KI +L E+ K+K ++GY T+FVLHDV ++ KE+ + QHSEKIA+AF L+ +
Sbjct: 496 ESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSP 555
Query: 670 PKPIRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGTCSCNDYW 722
+PI I KNLR+CGDCH K IS + R I++RD+ RFHH DG+CSC+DYW
Sbjct: 556 MEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 139/261 (53%), Gaps = 8/261 (3%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDML--EHGFYPNEYCFTAALRACSNSLYFSVG 61
+RDLVSW S++S ++ + M+ E GF PNE F + + AC G
Sbjct: 94 ERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEG 153
Query: 62 RVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFA 121
R + G V+K G + V V I+ + K GD+ S+ ++FE + +N+V+WN M+
Sbjct: 154 RCIHGLVMKFGVLEE-VKVVNAFINWYGK-TGDLTSSCKLFEDLSIKNLVSWNTMIVIHL 211
Query: 122 QMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLC 181
Q G E + F G+ PD+ T + L +C ++ ++ + + +H ++ G + + C
Sbjct: 212 QNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKC 271
Query: 182 VGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDM 241
+ +L+D+Y+K G L DS VF+ + + ++WTA++A Y G ++A++ F M
Sbjct: 272 ITTALLDLYSKL---GRLEDSSTVFHEITSPDSMAWTAMLAAYAT-HGFGRDAIKHFELM 327
Query: 242 LQGNVAPNGFTFSSVLKACAN 262
+ ++P+ TF+ +L AC++
Sbjct: 328 VHYGISPDHVTFTHLLNACSH 348
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/453 (20%), Positives = 209/453 (46%), Gaps = 27/453 (5%)
Query: 36 HGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDI 95
H N AA+++C + + R++ V+K+ + H +G +L+ +++ D+
Sbjct: 28 HSLDANVSSLIAAVKSCVS---IELCRLLHCKVVKSVSY-RHGFIGDQLVGCYLRLGHDV 83
Query: 96 ESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLS--GYTPDRFTLTSALT 153
A ++F++M ER++V+WN +++ ++ GY ++ RM++S G+ P+ T S ++
Sbjct: 84 -CAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMIS 142
Query: 154 ACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHN 213
AC G+ +H V++ G+ ++ V + ++ Y K G L S ++F + N
Sbjct: 143 ACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGK---TGDLTSSCKLFEDLSIKN 199
Query: 214 VVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLH 273
+VSW +I +++ +G ++ + F + P+ TF +VL++C ++ + +H
Sbjct: 200 LVSWNTMIVIHLQ-NGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIH 258
Query: 274 SQTIKLGLSAVNCVANSLINMYARSGRLECARKCF-DLLFEKSLVSCETIVDVIVRDLNS 332
+ G S C+ +L+++Y++ GRLE + F ++ S+ +
Sbjct: 259 GLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGR 318
Query: 333 DETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQ-IHALVVKSGFETNLSINNAL 391
D + E GI T+ LL+ + G + +G+ + + + L + +
Sbjct: 319 DAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCM 378
Query: 392 ISMYSKCGNKEAALQVFNDMG-DRNVITWTSIISG---FAKHGYATKALELFYEMLETGV 447
+ + + G + A + +M + + W +++ + TKA E +E+
Sbjct: 379 VDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFEL----- 433
Query: 448 KPND-VTYIAVLSACSHVGLIDEGWKHFNSMRH 479
+P D Y+ + + S GL WK + +R+
Sbjct: 434 EPRDGRNYVMLSNIYSASGL----WKDASRIRN 462
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 7/222 (3%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR 62
S ++LVSW +M+ N + + L F G P++ F A LR+C + + +
Sbjct: 196 SIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQ 255
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
+ G ++ G F + + L+D++ K G +E + VF ++ + + W M+ +A
Sbjct: 256 GIHGLIMFGG-FSGNKCITTALLDLYSK-LGRLEDSSTVFHEITSPDSMAWTAMLAAYAT 313
Query: 123 MGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQ-LHSWVIRSGLALDLC 181
G+ D+I F M+ G +PD T T L AC+ L+ GK + R + L
Sbjct: 314 HGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLD 373
Query: 182 VGCSLVDMYAKCAVDGSLVDSRRVFNSMP-EHNVVSWTALIA 222
+VD+ + G L D+ + MP E + W AL+
Sbjct: 374 HYSCMVDLLGR---SGLLQDAYGLIKEMPMEPSSGVWGALLG 412
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 415 bits (1066), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/627 (35%), Positives = 360/627 (57%), Gaps = 9/627 (1%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
++ V+W +M+S + +L F ++E P+ Y + L ACS + G+
Sbjct: 211 EKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQ 270
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
+ +L+ G + S+ LID +VK CG + +AH++F M +N+++W +++ + Q
Sbjct: 271 IHAHILRYG-LEMDASLMNVLIDSYVK-CGRVIAAHKLFNGMPNKNIISWTTLLSGYKQN 328
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVG 183
+++++LF M G PD + +S LT+CA L L G Q+H++ I++ L D V
Sbjct: 329 ALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVT 388
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQ--EAMRLFCDM 241
SL+DMYAKC L D+R+VF+ +VV + A+I GY R Q + EA+ +F DM
Sbjct: 389 NSLIDMYAKC---DCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDM 445
Query: 242 LQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRL 301
+ P+ TF S+L+A A+L G +Q+H K GL+ ++LI++Y+ L
Sbjct: 446 RFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCL 505
Query: 302 ECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETE-HTTGIGACSFTYACLLSGA 360
+ +R FD + K LV ++ V+ ++E LN E + FT+A +++ A
Sbjct: 506 KDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAA 565
Query: 361 ACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWT 420
+ ++ G++ H ++K G E N I NAL+ MY+KCG+ E A + F+ R+V+ W
Sbjct: 566 GNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWN 625
Query: 421 SIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHC 480
S+IS +A HG KAL++ +M+ G++PN +T++ VLSACSH GL+++G K F M
Sbjct: 626 SVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR- 684
Query: 481 HGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEH 540
G+ P EHY CMV +LGR+G L++A E I MP A+VWRSLL C GN EL EH
Sbjct: 685 FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEH 744
Query: 541 AAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVH 600
AA+M + +P D ++ +LSN+YA++ W + +R+ MK + ++KE G SWI + +VH
Sbjct: 745 AAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVH 804
Query: 601 KFHVGDTSHPQAQKIYDELDELASKIK 627
F D SH +A +IY+ LD+L +I+
Sbjct: 805 IFLSKDKSHCKANQIYEVLDDLLVQIR 831
Score = 261 bits (668), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 171/551 (31%), Positives = 296/551 (53%), Gaps = 22/551 (3%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLE-HGFYPNEYCFTAALRACSNSLYFSVGR 62
+R+LVSW +M+S ++ + E+LV FL+ PNEY ++ ++ACS GR
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSG--LDGRGR 164
Query: 63 -VVFG--SVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTR 119
+VF S L FD V VG LID ++K G+I+ A VF+ + E++ VTW M++
Sbjct: 165 WMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKD-GNIDYARLVFDALPEKSTVTWTTMISG 223
Query: 120 FAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALD 179
+MG S+ LF++++ PD + L++ L+AC+ L L GKQ+H+ ++R GL +D
Sbjct: 224 CVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMD 283
Query: 180 LCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFC 239
+ L+D Y KC G ++ + ++FN MP N++SWT L++GY + + +EAM LF
Sbjct: 284 ASLMNVLIDSYVKC---GRVIAAHKLFNGMPNKNIISWTTLLSGY-KQNALHKEAMELFT 339
Query: 240 DMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSG 299
M + + P+ + SS+L +CA+L GFG Q+H+ TIK L + V NSLI+MYA+
Sbjct: 340 SMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCD 399
Query: 300 RLECARKCFDLLFEKSLVSCETIVDVIVR---DLNSDETLN-HETEHTTGIGACSFTYAC 355
L ARK FD+ +V +++ R E LN I T+
Sbjct: 400 CLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVS 459
Query: 356 LLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRN 415
LL +A + ++G +QIH L+ K G ++ +ALI +YS C + + VF++M ++
Sbjct: 460 LLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKD 519
Query: 416 VITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWK-HF 474
++ W S+ +G+ + +AL LF E+ + +P++ T+ +++A ++ + G + H
Sbjct: 520 LVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHC 579
Query: 475 NSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGN 534
++ P + + ++D+ + G +A + +S D + W S++ S HG
Sbjct: 580 QLLKRGLECNPYITN--ALLDMYAKCGSPEDAHKAFDSAA-SRDVVCWNSVISSYANHGE 636
Query: 535 TELGEHAAKMI 545
G+ A +M+
Sbjct: 637 ---GKKALQML 644
Score = 202 bits (514), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 146/527 (27%), Positives = 280/527 (53%), Gaps = 26/527 (4%)
Query: 42 EYCFTAALRACSNSLYFSVGRVVFGSVLKTGY-FDSHVSVGCELIDMFVKGCGDIESAHR 100
E+ LRA + L++ VV G ++ G D+++S LI+++ + G + A +
Sbjct: 46 EFARLLQLRASDDLLHYQ--NVVHGQIIVWGLELDTYLS--NILINLYSRAGGMV-YARK 100
Query: 101 VFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGY-TPDRFTLTSALTACAELE 159
VFEKM ERN+V+W+ M++ G E+S+ +F + +P+ + L+S + AC+ L+
Sbjct: 101 VFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLD 160
Query: 160 LLSVGK----QLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVV 215
G+ QL S++++SG D+ VG L+D Y K DG++ +R VF+++PE + V
Sbjct: 161 --GRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLK---DGNIDYARLVFDALPEKSTV 215
Query: 216 SWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQ 275
+WT +I+G V+ G+ +++LF +++ NV P+G+ S+VL AC+ LP G+Q+H+
Sbjct: 216 TWTTMISGCVK-MGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAH 274
Query: 276 TIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDET 335
++ GL + N LI+ Y + GR+ A K F+ + K+++S T++ ++ E
Sbjct: 275 ILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEA 334
Query: 336 LNHETEHTTGIGACSFTYAC--LLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALIS 393
+ T + G YAC +L+ A + +G G Q+HA +K+ + + N+LI
Sbjct: 335 MELFTS-MSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLID 393
Query: 394 MYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYA---TKALELFYEMLETGVKPN 450
MY+KC A +VF+ +V+ + ++I G+++ G +AL +F +M ++P+
Sbjct: 394 MYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPS 453
Query: 451 DVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFI 510
+T++++L A + + + K + + +G+ + + ++DV L ++
Sbjct: 454 LLTFVSLLRASASLTSLGLS-KQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVF 512
Query: 511 NSMPLDADAMVWRSLL-GSCRVHGNTELGEHAAKMILEREPHDPATY 556
+ M + D ++W S+ G + N E ++ L RE D T+
Sbjct: 513 DEMKVK-DLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTF 558
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 105/235 (44%), Gaps = 9/235 (3%)
Query: 334 ETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALIS 393
E +N + T GI +A LL A + +H ++ G E + ++N LI+
Sbjct: 29 EFVNADFPSTIGIRG-RREFARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILIN 87
Query: 394 MYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGV-KPNDV 452
+YS+ G A +VF M +RN+++W++++S HG ++L +F E T PN+
Sbjct: 88 LYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEY 147
Query: 453 TYIAVLSACSHVGLIDEG-WKHF--NSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEF 509
+ + ACS GL G W F S G V ++D + G + A
Sbjct: 148 ILSSFIQACS--GLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLV 205
Query: 510 INSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYA 564
+++P + + W +++ C G + + ++E + P YIL + L A
Sbjct: 206 FDALP-EKSTVTWTTMISGCVKMGRSYVSLQLFYQLME-DNVVPDGYILSTVLSA 258
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 414 bits (1065), Expect = e-116, Method: Compositional matrix adjust.
Identities = 238/659 (36%), Positives = 367/659 (55%), Gaps = 39/659 (5%)
Query: 77 HVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRM 136
HVS+ ++I + + + A +F++M R+VV+WN M++ + G ++ LF M
Sbjct: 65 HVSLYTKMITGYTRS-NRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEM 123
Query: 137 LLSGYTPDR--FTLTSALTACAELELLSVGKQL-HSWVIRSGLALDLCVGCSLVDMYAKC 193
P+R + T+ + C + ++L + ++ A + S+V Y +
Sbjct: 124 ------PERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWN-----SMVHGYLQF 172
Query: 194 AVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTF 253
G + D+ ++F MP NV+SWT +I G + + EA+ LF +ML+ + F
Sbjct: 173 ---GKVDDALKLFKQMPGKNVISWTTMICGLDQNE-RSGEALDLFKNMLRCCIKSTSRPF 228
Query: 254 SSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFE 313
+ V+ ACAN P F G Q+H IKLG V+ SLI YA R+ +RK FD
Sbjct: 229 TCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVH 288
Query: 314 KSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSF---------TYACLLSGAACIG 364
+ + ++ S +LN + E I + T+A L+ + +G
Sbjct: 289 EQVAVWTALL--------SGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALG 340
Query: 365 TIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIIS 424
T+ G+++H + VK G ET+ + N+L+ MYS GN A+ VF + +++++W SII
Sbjct: 341 TLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIV 400
Query: 425 GFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVV 484
G A+HG A +F +M+ +P+++T+ +LSACSH G +++G K F M +
Sbjct: 401 GCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHI 460
Query: 485 PR-VEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAK 543
R ++HY CMVD+LGR G L EA E I M + + MVW +LL +CR+H + + GE AA
Sbjct: 461 DRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAA 520
Query: 544 MILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFH 603
I + A Y+LLSN+YA+ RW +V+ +R MK+ I+K+ G SW+ + + H+F
Sbjct: 521 AIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFF 580
Query: 604 VGDTSHPQAQKIYDELDELASKIKKLGYVPNTDFVLHDVEDEQKEQYLFQHSEKIAVAFA 663
GD P +IY++L+ L K+K+LGY P+ LHDVEDEQKE+ L+ HSE++A+AF
Sbjct: 581 SGD--QPHCSRIYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFG 638
Query: 664 LISIPNPKPIRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGTCSCNDYW 722
LI+ + + KNLRVC DCHT IK IS V GR IV+RD RFHH K+GTCSC DYW
Sbjct: 639 LINTVEGSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 132/476 (27%), Positives = 211/476 (44%), Gaps = 61/476 (12%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
RD+VSW SM+S + A+ F +M E +TA + C S +
Sbjct: 95 RDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVS----WTAMVNGCFRSGKVDQAERL 150
Query: 65 FGS--VLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
F V T ++S V + G ++ A ++F++M +NV++W M+ Q
Sbjct: 151 FYQMPVKDTAAWNSMVHGYLQF--------GKVDDALKLFKQMPGKNVISWTTMICGLDQ 202
Query: 123 MGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCV 182
+++DLF ML T +TACA +G Q+H +I+ G + V
Sbjct: 203 NERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYV 262
Query: 183 GCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDML 242
SL+ YA C G DSR+VF+ V WTAL++GY E +A+ +F ML
Sbjct: 263 SASLITFYANCKRIG---DSRKVFDEKVHEQVAVWTALLSGYSLNKKHE-DALSIFSGML 318
Query: 243 QGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLE 302
+ ++ PN TF+S L +C+ L +G+++H +KLGL V NSL+ MY+ SG +
Sbjct: 319 RNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVN 378
Query: 303 CARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGAAC 362
A F +F+KS+VS +I+ + G G +F
Sbjct: 379 DAVSVFIKIFKKSIVSWNSIIVGCAQH---------------GRGKWAFV---------- 413
Query: 363 IGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMG------DRNV 416
I +++ E + L+S S CG E ++F M DR +
Sbjct: 414 ---------IFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKI 464
Query: 417 ITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWK 472
+T ++ + G +A EL M+ VKPN++ ++A+LSAC +D G K
Sbjct: 465 QHYTCMVDILGRCGKLKEAEELIERMV---VKPNEMVWLALLSACRMHSDVDRGEK 517
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 413 bits (1061), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/560 (38%), Positives = 345/560 (61%), Gaps = 6/560 (1%)
Query: 164 GKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAG 223
G QLH +V++SGL+L V +L++ Y+K + DSRR F P+ + +W+++I+
Sbjct: 34 GLQLHGYVVKSGLSLIPLVANNLINFYSKSQLP---FDSRRAFEDSPQKSSTTWSSIISC 90
Query: 224 YVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSA 283
+ + ++ M+ GN+ P+ S K+CA L G +H ++K G A
Sbjct: 91 FAQNE-LPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDA 149
Query: 284 VNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHT 343
V +SL++MYA+ G + ARK FD + ++++V+ ++ + ++E L E
Sbjct: 150 DVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEAL 209
Query: 344 -TGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKE 402
+ ++++ ++S A + G QIH L +KS F+++ + ++L+S+YSKCG E
Sbjct: 210 FENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPE 269
Query: 403 AALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACS 462
A QVFN++ +N+ W +++ +A+H + K +ELF M +G+KPN +T++ VL+ACS
Sbjct: 270 GAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACS 329
Query: 463 HVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVW 522
H GL+DEG +F+ M+ + P +HYA +VD+LGR+G L EA+E I +MP+D VW
Sbjct: 330 HAGLVDEGRYYFDQMKESR-IEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVW 388
Query: 523 RSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQK 582
+LL SC VH NTEL AA + E P +I LSN YA + R+ D A RK ++ +
Sbjct: 389 GALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDR 448
Query: 583 KIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTDFVLHDV 642
KE G SW+E N+VH F G+ H ++++IY++L EL +++K GY+ +T +VL +V
Sbjct: 449 GEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREV 508
Query: 643 EDEQKEQYLFQHSEKIAVAFALISIPNPKPIRIFKNLRVCGDCHTAIKYISKVTGRVIVV 702
+ ++K Q + HSE++A+AF LI+ P +PIR+ KNLRVCGDCH AIK++S T RVI+V
Sbjct: 509 DGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIV 568
Query: 703 RDANRFHHIKDGTCSCNDYW 722
RD NRFH +DG CSCNDYW
Sbjct: 569 RDNNRFHRFEDGKCSCNDYW 588
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 154/289 (53%), Gaps = 6/289 (2%)
Query: 16 CFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVLKTGYFD 75
CFA N + +L M+ P+++ +A ++C+ +GR V +KTGY D
Sbjct: 90 CFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGY-D 148
Query: 76 SHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFR 135
+ V VG L+DM+ K CG+I A ++F++M +RNVVTW+ MM +AQMG E+++ LF
Sbjct: 149 ADVFVGSSLVDMYAK-CGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKE 207
Query: 136 MLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAV 195
L + ++ +S ++ CA LL +G+Q+H I+S VG SLV +Y+KC V
Sbjct: 208 ALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGV 267
Query: 196 DGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSS 255
+ +VFN +P N+ W A++ Y + S Q+ + LF M + PN TF +
Sbjct: 268 PEG---AYQVFNEVPVKNLGIWNAMLKAYAQHS-HTQKVIELFKRMKLSGMKPNFITFLN 323
Query: 256 VLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECA 304
VL AC++ G Q + + + SL++M R+GRL+ A
Sbjct: 324 VLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEA 372
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 190/371 (51%), Gaps = 8/371 (2%)
Query: 61 GRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRF 120
G + G V+K+G V LI+ + K +S R FE +++ TW+ +++ F
Sbjct: 34 GLQLHGYVVKSG-LSLIPLVANNLINFYSKSQLPFDS-RRAFEDSPQKSSTTWSSIISCF 91
Query: 121 AQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDL 180
AQ P S++ +M+ PD L SA +CA L +G+ +H +++G D+
Sbjct: 92 AQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADV 151
Query: 181 CVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCD 240
VG SLVDMYAKC G +V +R++F+ MP+ NVV+W+ ++ GY + G+ +EA+ LF +
Sbjct: 152 FVGSSLVDMYAKC---GEIVYARKMFDEMPQRNVVTWSGMMYGYAQ-MGENEEALWLFKE 207
Query: 241 MLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGR 300
L N+A N ++FSSV+ CAN G Q+H +IK + + V +SL+++Y++ G
Sbjct: 208 ALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGV 267
Query: 301 LECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSG 359
E A + F+ + K+L ++ + ++ + + + +G+ T+ +L+
Sbjct: 268 PEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNA 327
Query: 360 AACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMG-DRNVIT 418
+ G + +G + +S E +L+ M + G + AL+V +M D
Sbjct: 328 CSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESV 387
Query: 419 WTSIISGFAKH 429
W ++++ H
Sbjct: 388 WGALLTSCTVH 398
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 10/195 (5%)
Query: 356 LLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRN 415
LLS A TI KG Q+H VVKSG + N LI+ YSK + + F D ++
Sbjct: 22 LLSSARTRSTI-KGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKS 80
Query: 416 VITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWK-HF 474
TW+SIIS FA++ +LE +M+ ++P+D + +C+ + D G H
Sbjct: 81 STTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHC 140
Query: 475 NSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGN 534
SM+ G V + +VD+ + G + A + + MP + + W ++ +G
Sbjct: 141 LSMK--TGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMP-QRNVVTWSGMM-----YGY 192
Query: 535 TELGEHAAKMILERE 549
++GE+ + L +E
Sbjct: 193 AQMGENEEALWLFKE 207
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 411 bits (1056), Expect = e-114, Method: Compositional matrix adjust.
Identities = 214/606 (35%), Positives = 347/606 (57%), Gaps = 38/606 (6%)
Query: 152 LTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPE 211
L CA L+ K LH+ +++ G+ + +LV++Y KC G+ + +VF+ MP
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKC---GAASHALQVFDEMPH 66
Query: 212 HNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQ 271
+ ++W +++ + + + + P+ F FS+++KACANL G Q
Sbjct: 67 RDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQ 126
Query: 272 LHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLN 331
+H I + V +SL++MYA+ G L A+ FD + K+ +S +V +
Sbjct: 127 VHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGR 186
Query: 332 SDETL------------------NHETEHTTGIGACS---------------FTYACLLS 358
+E L + + G+ A S + ++
Sbjct: 187 KEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVG 246
Query: 359 GAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVIT 418
A + G Q+H LV+ GF++ + I+NALI MY+KC + AA +F+ M R+V++
Sbjct: 247 ACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVS 306
Query: 419 WTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMR 478
WTS+I G A+HG A KAL L+ +M+ GVKPN+VT++ ++ ACSHVG +++G + F SM
Sbjct: 307 WTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMT 366
Query: 479 HCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELG 538
+G+ P ++HY C++D+LGRSGLL EA I++MP D W +LL +C+ G ++G
Sbjct: 367 KDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMG 426
Query: 539 EHAAKMILER-EPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVEN 597
A ++ + DP+TYILLSN+YA+ W V+ R+ + + ++ K+ G+S +EV
Sbjct: 427 IRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRK 486
Query: 598 QVHKFHVGDTSHPQAQKIYDELDELASKIK-KLGYVPNTDFVLHDVEDEQKEQYLFQHSE 656
+ F+ G+TSHP + I+ L +L +++ + GYVP+T ++LHD+++++KE+ LF HSE
Sbjct: 487 ETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSE 546
Query: 657 KIAVAFALISIPNPKPIRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGTC 716
+ AVA+ L+ PIRI KNLRVCGDCH +K+IS++T R I+VRDA R+HH K G C
Sbjct: 547 RSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKC 606
Query: 717 SCNDYW 722
SCND+W
Sbjct: 607 SCNDFW 612
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 167/336 (49%), Gaps = 44/336 (13%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHG-FYPNEYCFTAALRACSNSLYFSVGRV 63
RD ++W S+++ ++ + L F + P+++ F+A ++AC+N GR
Sbjct: 67 RDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQ 126
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
V + + Y + V V L+DM+ K CG + SA VF+ ++ +N ++W M++ +A+
Sbjct: 127 VHCHFIVSEYANDEV-VKSSLVDMYAK-CGLLNSAKAVFDSIRVKNTISWTAMVSGYAKS 184
Query: 124 GYPEDSIDLF----------FRMLLSGYTP----------------------DRFTLTSA 151
G E++++LF + L+SG+ D L+S
Sbjct: 185 GRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSI 244
Query: 152 LTACAELELLSVGKQLHSWVIRSGLALDLCVGCS--LVDMYAKCAVDGSLVDSRRVFNSM 209
+ ACA L G+Q+H VI L D CV S L+DMYAKC+ ++ ++ +F+ M
Sbjct: 245 VGACANLAASIAGRQVHGLVI--ALGFDSCVFISNALIDMYAKCS---DVIAAKDIFSRM 299
Query: 210 PEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFG 269
+VVSWT+LI G + GQ ++A+ L+ DM+ V PN TF ++ AC+++ G
Sbjct: 300 RHRDVVSWTSLIVGMAQ-HGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKG 358
Query: 270 EQL-HSQTIKLGLSAVNCVANSLINMYARSGRLECA 304
+L S T G+ L+++ RSG L+ A
Sbjct: 359 RELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEA 394
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 113/465 (24%), Positives = 213/465 (45%), Gaps = 39/465 (8%)
Query: 49 LRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQER 108
L+ C+ + + + + ++K G + L++++ K CG A +VF++M R
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQC-CPLANTLVNVYGK-CGAASHALQVFDEMPHR 67
Query: 109 NVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSG-YTPDRFTLTSALTACAELELLSVGKQL 167
+ + W ++T Q ++ +F + S PD F ++ + ACA L + G+Q+
Sbjct: 68 DHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQV 127
Query: 168 HSWVIRSGLALDLCVGCSLVDMYAKCAVDGS---LVDSRRVFNS---------------- 208
H I S A D V SLVDMYAKC + S + DS RV N+
Sbjct: 128 HCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRK 187
Query: 209 ---------MPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNV-APNGFTFSSVLK 258
+P N+ SWTALI+G+V+ SG+ EA +F +M + V + SS++
Sbjct: 188 EEALELFRILPVKNLYSWTALISGFVQ-SGKGLEAFSVFTEMRRERVDILDPLVLSSIVG 246
Query: 259 ACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVS 318
ACANL G Q+H I LG + ++N+LI+MYA+ + A+ F + + +VS
Sbjct: 247 ACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVS 306
Query: 319 CETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVV 377
+++ + + +++ L ++ + G+ T+ L+ + +G + KG ++ +
Sbjct: 307 WTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMT 366
Query: 378 KS-GFETNLSINNALISMYSKCGNKEAALQVFNDMG-DRNVITWTSIISGFAKHGYATKA 435
K G +L L+ + + G + A + + M + TW +++S + G
Sbjct: 367 KDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMG 426
Query: 436 LELFYEMLETGVKPNDVTYIA---VLSACSHVGLIDEGWKHFNSM 477
+ + ++ + + TYI + ++ S G + E + M
Sbjct: 427 IRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEM 471
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 118/236 (50%), Gaps = 9/236 (3%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDML-EHGFYPNEYCFTAALRACSNSLYFSVGRV 63
++L SW +++S F + EA F +M E + ++ + AC+N GR
Sbjct: 200 KNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQ 259
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
V G V+ G FDS V + LIDM+ K C D+ +A +F +M+ R+VV+W ++ AQ
Sbjct: 260 VHGLVIALG-FDSCVFISNALIDMYAK-CSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQH 317
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRS-GLALDLCV 182
G E ++ L+ M+ G P+ T + AC+ + + G++L + + G+ L
Sbjct: 318 GQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQH 377
Query: 183 GCSLVDMYAKCAVDGSLVDSRRVFNSMP-EHNVVSWTALIAGYVRGSGQEQEAMRL 237
L+D+ + G L ++ + ++MP + +W AL++ R G+ Q +R+
Sbjct: 378 YTCLLDLLGR---SGLLDEAENLIHTMPFPPDEPTWAALLSACKR-QGRGQMGIRI 429
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 90/217 (41%), Gaps = 42/217 (19%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
RD+VSW S++ A + +AL + DM+ HG PNE F + ACS+ + GR +
Sbjct: 302 RDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGREL 361
Query: 65 FGSVLKT-GYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
F S+ K G S C L+D+ + G ++ A NL+ T M
Sbjct: 362 FQSMTKDYGIRPSLQHYTC-LLDLLGRS-GLLDEAE--------------NLIHT----M 401
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVG 183
+P PD T + L+AC +G ++ ++ S D
Sbjct: 402 PFP----------------PDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTY 445
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSM-----PEHNVV 215
L ++YA ++ G + ++RR M P H+ V
Sbjct: 446 ILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSV 482
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 408 bits (1049), Expect = e-114, Method: Compositional matrix adjust.
Identities = 236/639 (36%), Positives = 371/639 (58%), Gaps = 12/639 (1%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
+++ V W +M+ +A+N H+ + F+DM G+ +++ FT+ L C+ S +G
Sbjct: 390 EKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQ 449
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
F S++ ++ VG L+DM+ K CG +E A ++FE+M +R+ VTWN ++ + Q
Sbjct: 450 -FHSIIIKKKLAKNLFVGNALVDMYAK-CGALEDARQIFERMCDRDNVTWNTIIGSYVQD 507
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVG 183
++ DLF RM L G D L S L AC + L GKQ+H ++ GL DL G
Sbjct: 508 ENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTG 567
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQ 243
SL+DMY+KC G + D+R+VF+S+PE +VVS ALIAGY + + +EA+ LF +ML
Sbjct: 568 SSLIDMYSKC---GIIKDARKVFSSLPEWSVVSMNALIAGYSQNN--LEEAVVLFQEMLT 622
Query: 244 GNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVN-CVANSLINMYARS-GRL 301
V P+ TF+++++AC G Q H Q K G S+ + SL+ MY S G
Sbjct: 623 RGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMT 682
Query: 302 ECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETE-HTTGIGACSFTYACLLSGA 360
E +L KS+V ++ ++ +E L E G+ T+ +L
Sbjct: 683 EACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVC 742
Query: 361 ACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDR-NVITW 419
+ + ++ +G IH+L+ + + +N LI MY+KCG+ + + QVF++M R NV++W
Sbjct: 743 SVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSW 802
Query: 420 TSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRH 479
S+I+G+AK+GYA AL++F M ++ + P+++T++ VL+ACSH G + +G K F M
Sbjct: 803 NSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIG 862
Query: 480 CHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGE 539
+G+ RV+H ACMVD+LGR G L EA +FI + L DA +W SLLG+CR+HG+ GE
Sbjct: 863 QYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGE 922
Query: 540 HAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQV 599
+A+ ++E EP + + Y+LLSN+YA++ W A+RK M+ + + K GYSWI+VE +
Sbjct: 923 ISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRT 982
Query: 600 HKFHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTDFV 638
H F GD SH + KI L++L +K V N D V
Sbjct: 983 HIFAAGDKSHSEIGKIEMFLEDLYDLMKDDAVV-NPDIV 1020
Score = 239 bits (611), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 159/542 (29%), Positives = 269/542 (49%), Gaps = 21/542 (3%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR 62
S D+V+W M+S E A+ F +M + + L A +G
Sbjct: 288 SSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGL 347
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
VV +K G S++ VG L+ M+ K C +E+A +VFE ++E+N V WN M+ +A
Sbjct: 348 VVHAEAIKLG-LASNIYVGSSLVSMYSK-CEKMEAAAKVFEALEEKNDVFWNAMIRGYAH 405
Query: 123 MGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCV 182
G ++LF M SGY D FT TS L+ CA L +G Q HS +I+ LA +L V
Sbjct: 406 NGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFV 465
Query: 183 GCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDML 242
G +LVDMYAKC G+L D+R++F M + + V+W +I YV+ E EA LF M
Sbjct: 466 GNALVDMYAKC---GALEDARQIFERMCDRDNVTWNTIIGSYVQDE-NESEAFDLFKRMN 521
Query: 243 QGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLE 302
+ +G +S LKAC ++ G+Q+H ++K GL +SLI+MY++ G ++
Sbjct: 522 LCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIK 581
Query: 303 CARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGAAC 362
ARK F L E S+VS ++ ++ + + + T G+ T+A ++
Sbjct: 582 DARKVFSSLPEWSVVSMNALIAGYSQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHK 641
Query: 363 IGTIGKGEQIHALVVKSGFETNLS-INNALISMYSKCGNKEAALQVFNDMGD-RNVITWT 420
++ G Q H + K GF + + +L+ MY A +F+++ ++++ WT
Sbjct: 642 PESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWT 701
Query: 421 SIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHC 480
++SG +++G+ +AL+ + EM GV P+ T++ VL CS + + EG R
Sbjct: 702 GMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREG-------RAI 754
Query: 481 HGVVPRVEH------YACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGN 534
H ++ + H ++D+ + G + + + + M ++ + W SL+ +G
Sbjct: 755 HSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGY 814
Query: 535 TE 536
E
Sbjct: 815 AE 816
Score = 216 bits (549), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 136/512 (26%), Positives = 249/512 (48%), Gaps = 43/512 (8%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
++D+ +W SM+S +++ + L +F+ + E+ +PN++ F+ L C+ GR
Sbjct: 122 EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQ 181
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
+ S++K G + + G L+DM+ K C I A RVFE + + N V W + + + +
Sbjct: 182 IHCSMIKMG-LERNSYCGGALVDMYAK-CDRISDARRVFEWIVDPNTVCWTCLFSGYVKA 239
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVG 183
G PE+++ +F RM G+ PD + + L
Sbjct: 240 GLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRL------------------------- 274
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQ 243
G L D+R +F M +VV+W +I+G+ + G E A+ F +M +
Sbjct: 275 -------------GKLKDARLLFGEMSSPDVVAWNVMISGHGK-RGCETVAIEYFFNMRK 320
Query: 244 GNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLEC 303
+V T SVL A + + G +H++ IKLGL++ V +SL++MY++ ++E
Sbjct: 321 SSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEA 380
Query: 304 ARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETE-HTTGIGACSFTYACLLSGAAC 362
A K F+ L EK+ V ++ + S + + + ++G FT+ LLS A
Sbjct: 381 AAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAA 440
Query: 363 IGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSI 422
+ G Q H++++K NL + NAL+ MY+KCG E A Q+F M DR+ +TW +I
Sbjct: 441 SHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTI 500
Query: 423 ISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHG 482
I + + ++A +LF M G+ + + L AC+HV + +G K + + G
Sbjct: 501 IGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQG-KQVHCLSVKCG 559
Query: 483 VVPRVEHYACMVDVLGRSGLLSEAIEFINSMP 514
+ + + ++D+ + G++ +A + +S+P
Sbjct: 560 LDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Score = 213 bits (541), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 141/431 (32%), Positives = 232/431 (53%), Gaps = 24/431 (5%)
Query: 40 PNEYCFTAALRACSNSLYFSVGR-----VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGD 94
PN C+T C S Y G +VF + G+ H++ +I+ +++ G
Sbjct: 224 PNTVCWT-----CLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAF-VTVINTYIR-LGK 276
Query: 95 IESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTA 154
++ A +F +M +VV WN+M++ + G +I+ FF M S R TL S L+A
Sbjct: 277 LKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA 336
Query: 155 CAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNV 214
+ L +G +H+ I+ GLA ++ VG SLV MY+KC + + +VF ++ E N
Sbjct: 337 IGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCE---KMEAAAKVFEALEEKND 393
Query: 215 VSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHS 274
V W A+I GY +G+ + M LF DM + FTF+S+L CA D G Q HS
Sbjct: 394 VFWNAMIRGYAH-NGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHS 452
Query: 275 QTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDE 334
IK L+ V N+L++MYA+ G LE AR+ F+ + ++ V+ TI+ V+D N E
Sbjct: 453 IIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESE 512
Query: 335 TLN-HETEHTTGI---GACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNA 390
+ + + GI GAC A L + + +G+Q+H L VK G + +L ++
Sbjct: 513 AFDLFKRMNLCGIVSDGAC---LASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSS 569
Query: 391 LISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPN 450
LI MYSKCG + A +VF+ + + +V++ ++I+G++++ +A+ LF EML GV P+
Sbjct: 570 LIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPS 628
Query: 451 DVTYIAVLSAC 461
++T+ ++ AC
Sbjct: 629 EITFATIVEAC 639
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 143/310 (46%), Gaps = 39/310 (12%)
Query: 161 LSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTAL 220
L +GK +HS + G+ + +G ++VD+YAKCA + + + F+ + E +V +W ++
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCA---QVSYAEKQFDFL-EKDVTAWNSM 131
Query: 221 IAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLG 280
++ Y G+ + +R F + + + PN FTFS VL CA + FG Q+H IK+G
Sbjct: 132 LSMY-SSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMG 190
Query: 281 LSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHET 340
L + +L++MYA+ R+ AR+ F+ + + + V
Sbjct: 191 LERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTV----------------------- 227
Query: 341 EHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGN 400
+ CL SG G + + + G + +I+ Y + G
Sbjct: 228 -----------CWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGK 276
Query: 401 KEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSA 460
+ A +F +M +V+ W +ISG K G T A+E F+ M ++ VK T +VLSA
Sbjct: 277 LKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA 336
Query: 461 CSHVGLIDEG 470
V +D G
Sbjct: 337 IGIVANLDLG 346
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 129/261 (49%), Gaps = 8/261 (3%)
Query: 269 GEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVR 328
G+ +HS+++ LG+ + + N+++++YA+ ++ A K FD L EK + + +++ +
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSS 137
Query: 329 DLNSDETL-NHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSI 387
+ L + + I FT++ +LS A + G QIH ++K G E N
Sbjct: 138 IGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYC 197
Query: 388 NNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGV 447
AL+ MY+KC A +VF + D N + WT + SG+ K G +A+ +F M + G
Sbjct: 198 GGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGH 257
Query: 448 KPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAI 507
+P+ + ++ V++ +G + + F M P V + M+ G+ G + AI
Sbjct: 258 RPDHLAFVTVINTYIRLGKLKDARLLFGEMSS-----PDVVAWNVMISGHGKRGCETVAI 312
Query: 508 EFINSMPLDADAMVWRSLLGS 528
E+ +M + RS LGS
Sbjct: 313 EYFFNMR-KSSVKSTRSTLGS 332
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 89/173 (51%), Gaps = 3/173 (1%)
Query: 1 MGSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSV 60
+ S + +V W MMS + N EAL + +M G P++ F LR CS
Sbjct: 691 LSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLRE 750
Query: 61 GRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQER-NVVTWNLMMTR 119
GR + + + D LIDM+ K CGD++ + +VF++M+ R NVV+WN ++
Sbjct: 751 GRAIHSLIFHLAH-DLDELTSNTLIDMYAK-CGDMKGSSQVFDEMRRRSNVVSWNSLING 808
Query: 120 FAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVI 172
+A+ GY ED++ +F M S PD T LTAC+ +S G+++ +I
Sbjct: 809 YAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMI 861
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 408 bits (1048), Expect = e-114, Method: Compositional matrix adjust.
Identities = 231/635 (36%), Positives = 356/635 (56%), Gaps = 32/635 (5%)
Query: 95 IESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTA 154
I A VFE M ERNVV+W M+ + Q G ++ LF+RM P+R ++ +
Sbjct: 95 IVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRM------PERNEVSWTVMF 148
Query: 155 CAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNV 214
L+ G+ + + + + V + +M +G + ++R +F+ M E NV
Sbjct: 149 GG---LIDDGRIDKARKLYDMMPVKDVVAST--NMIGGLCREGRVDEARLIFDEMRERNV 203
Query: 215 VSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAP-----NGFTFSSVLKACANLPDFGFG 269
V+WT +I GY R + + A +LF M + G+T S ++ F
Sbjct: 204 VTWTTMITGY-RQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEE-----FF 257
Query: 270 EQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRD 329
E + + + + C N++I + G + AR+ FDL+ ++ + ++ R
Sbjct: 258 EVMPMKPV------IAC--NAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERK 309
Query: 330 LNSDETLNHETE-HTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSIN 388
E L+ + G+ + +LS A + ++ G Q+HA +V+ F+ ++ +
Sbjct: 310 GFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVA 369
Query: 389 NALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVK 448
+ L++MY KCG A VF+ +++I W SIISG+A HG +AL++F+EM +G
Sbjct: 370 SVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTM 429
Query: 449 PNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIE 508
PN VT IA+L+ACS+ G ++EG + F SM V P VEHY+C VD+LGR+G + +A+E
Sbjct: 430 PNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAME 489
Query: 509 FINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEER 568
I SM + DA VW +LLG+C+ H +L E AAK + E EP + TY+LLS++ A+ +
Sbjct: 490 LIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSK 549
Query: 569 WYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGD-TSHPQAQKIYDELDELASKIK 627
W DVA +RK M+ + K G SWIEV +VH F G +HP+ I L++ ++
Sbjct: 550 WGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLR 609
Query: 628 KLGYVPNTDFVLHDVEDEQKEQYLFQHSEKIAVAFALISIPNPKPIRIFKNLRVCGDCHT 687
+ GY P+ VLHDV++E+K L +HSE++AVA+ L+ +P PIR+ KNLRVCGDCH
Sbjct: 610 EAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHA 669
Query: 688 AIKYISKVTGRVIVVRDANRFHHIKDGTCSCNDYW 722
AIK ISKVT R I++RDANRFHH +G CSC DYW
Sbjct: 670 AIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 145/306 (47%), Gaps = 23/306 (7%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
+R++V+W +M++ + N+ A F M E E +T+ L +G
Sbjct: 200 ERNVVTWTTMITGYRQNNRVDVARKLFEVMPEK----TEVSWTSML----------LGYT 245
Query: 64 VFGSVLKTGYF----DSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTR 119
+ G + F + C + + G+I A RVF+ M++R+ TW M+
Sbjct: 246 LSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKA 305
Query: 120 FAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALD 179
+ + G+ +++DLF +M G P +L S L+ CA L L G+Q+H+ ++R D
Sbjct: 306 YERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDD 365
Query: 180 LCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFC 239
+ V L+ MY KC G LV ++ VF+ +++ W ++I+GY G +EA+++F
Sbjct: 366 VYVASVLMTMYVKC---GELVKAKLVFDRFSSKDIIMWNSIISGYA-SHGLGEEALKIFH 421
Query: 240 DMLQGNVAPNGFTFSSVLKACANLPDFGFG-EQLHSQTIKLGLSAVNCVANSLINMYARS 298
+M PN T ++L AC+ G E S K ++ + ++M R+
Sbjct: 422 EMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRA 481
Query: 299 GRLECA 304
G+++ A
Sbjct: 482 GQVDKA 487
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 172/391 (43%), Gaps = 68/391 (17%)
Query: 196 DGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSS 255
+G ++R++F+ M E NVVSW L++GY++ EA +F M + NV ++++
Sbjct: 61 NGLPKEARQLFDEMSERNVVSWNGLVSGYIKNR-MIVEARNVFELMPERNVV----SWTA 115
Query: 256 VLKACANLPDFGFGEQLH---------SQTIKLG-----------------LSAVNCVAN 289
++K G E L S T+ G + + VA+
Sbjct: 116 MVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVAS 175
Query: 290 S-LINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSD------ETLNHETEH 342
+ +I R GR++ AR FD + E+++V+ T++ ++ D E + +TE
Sbjct: 176 TNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTE- 234
Query: 343 TTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKE 402
++ +L G G I E+ ++ + NA+I + + G
Sbjct: 235 --------VSWTSMLLGYTLSGRIEDAEEFFEVMPMK----PVIACNAMIVGFGEVGEIS 282
Query: 403 AALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACS 462
A +VF+ M DR+ TW +I + + G+ +AL+LF +M + GV+P+ + I++LS C+
Sbjct: 283 KARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCA 342
Query: 463 HVGLIDEGWKHFNSMRHCHGVVPRVEH------YACMVDVLGRSGLLSEAIEFINSMPLD 516
+ + G R H + R + + ++ + + G L +A +
Sbjct: 343 TLASLQYG-------RQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFS-S 394
Query: 517 ADAMVWRSLLGSCRVHGNTELGEHAAKMILE 547
D ++W S++ HG LGE A K+ E
Sbjct: 395 KDIIMWNSIISGYASHG---LGEEALKIFHE 422
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 382 ETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYE 441
E N+ N L+S Y K A VF M +RNV++WT+++ G+ + G +A LF+
Sbjct: 76 ERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWR 135
Query: 442 MLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYAC--MVDVLGR 499
M E N+V++ + GLID+G + R + ++P + A M+ L R
Sbjct: 136 MPER----NEVSWTVMFG-----GLIDDG--RIDKARKLYDMMPVKDVVASTNMIGGLCR 184
Query: 500 SGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYIL- 558
G + EA + M + + + W +++ R + ++ +++ E+ + +L
Sbjct: 185 EGRVDEARLIFDEMR-ERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLG 243
Query: 559 --LSNLYATEERWYDVAAIRKTM 579
LS E +++V ++ +
Sbjct: 244 YTLSGRIEDAEEFFEVMPMKPVI 266
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 66/142 (46%), Gaps = 9/142 (6%)
Query: 389 NALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVK 448
N+++S Y G + A Q+F++M +RNV++W ++SG+ K+ +A +F M E V
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNV- 110
Query: 449 PNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIE 508
V++ A++ G++ E F M + V + M L G + +A +
Sbjct: 111 ---VSWTAMVKGYMQEGMVGEAESLFWRMPERNEV-----SWTVMFGGLIDDGRIDKARK 162
Query: 509 FINSMPLDADAMVWRSLLGSCR 530
+ MP+ + G CR
Sbjct: 163 LYDMMPVKDVVASTNMIGGLCR 184
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 407 bits (1047), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/603 (34%), Positives = 344/603 (57%), Gaps = 11/603 (1%)
Query: 127 EDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSL 186
E + R+L +P + T + C LS ++H ++ +G D + L
Sbjct: 59 EGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKL 118
Query: 187 VDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNV 246
+ MY+ GS+ +R+VF+ + + W AL +G +E + L+ M + V
Sbjct: 119 IGMYSDL---GSVDYARKVFDKTRKRTIYVWNALFRALTL-AGHGEEVLGLYWKMNRIGV 174
Query: 247 APNGFTFSSVLKACA----NLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLE 302
+ FT++ VLKAC + G+++H+ + G S+ + +L++MYAR G ++
Sbjct: 175 ESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVD 234
Query: 303 CARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETE---HTTGIGACSFTYACLLSG 359
A F + +++VS ++ ++ + E L E T S T +L
Sbjct: 235 YASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQA 294
Query: 360 AACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITW 419
A + + +G+ IH +++ G ++ L + +AL++MY +CG E +VF+ M DR+V++W
Sbjct: 295 CASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSW 354
Query: 420 TSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRH 479
S+IS + HGY KA+++F EML G P VT+++VL ACSH GL++EG + F +M
Sbjct: 355 NSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWR 414
Query: 480 CHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGE 539
HG+ P++EHYACMVD+LGR+ L EA + + M + VW SLLGSCR+HGN EL E
Sbjct: 415 DHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAE 474
Query: 540 HAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQV 599
A++ + EP + Y+LL+++YA + W +V ++K ++ + + K G W+EV ++
Sbjct: 475 RASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKM 534
Query: 600 HKFHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTDFVLHDVEDEQKEQYLFQHSEKIA 659
+ F D +P ++I+ L +LA +K+ GY+P T VL+++E E+KE+ + HSEK+A
Sbjct: 535 YSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLA 594
Query: 660 VAFALISIPNPKPIRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGTCSCN 719
+AF LI+ +PIRI KNLR+C DCH K+ISK + I+VRD NRFH K+G CSC
Sbjct: 595 LAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCG 654
Query: 720 DYW 722
DYW
Sbjct: 655 DYW 657
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 193/400 (48%), Gaps = 15/400 (3%)
Query: 40 PNEYCFTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAH 99
P++ + + C + S V +L G D + +LI M+ G ++ A
Sbjct: 75 PSQQTYELLILCCGHRSSLSDALRVHRHILDNGS-DQDPFLATKLIGMY-SDLGSVDYAR 132
Query: 100 RVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELE 159
+VF+K ++R + WN + G+ E+ + L+++M G DRFT T L AC E
Sbjct: 133 KVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASE 192
Query: 160 L----LSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVV 215
L GK++H+ + R G + + + +LVDMYA+ G + + VF MP NVV
Sbjct: 193 CTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARF---GCVDYASYVFGGMPVRNVV 249
Query: 216 SWTALIAGYVRGSGQEQEAMRLFCDMLQ--GNVAPNGFTFSSVLKACANLPDFGFGEQLH 273
SW+A+IA Y + +G+ EA+R F +M++ + +PN T SVL+ACA+L G+ +H
Sbjct: 250 SWSAMIACYAK-NGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIH 308
Query: 274 SQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVI-VRDLNS 332
++ GL ++ V ++L+ MY R G+LE ++ FD + ++ +VS +++ V
Sbjct: 309 GYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGK 368
Query: 333 DETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKS-GFETNLSINNAL 391
E G T+ +L + G + +G+++ + + G + + +
Sbjct: 369 KAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACM 428
Query: 392 ISMYSKCGNKEAALQVFNDM-GDRNVITWTSIISGFAKHG 430
+ + + + A ++ DM + W S++ HG
Sbjct: 429 VDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHG 468
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 96/165 (58%), Gaps = 4/165 (2%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEH--GFYPNEYCFTAALRACSNSLYFSVGR 62
R++VSW +M++C+A N EAL TF +M+ PN + L+AC++ G+
Sbjct: 246 RNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGK 305
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
++ G +L+ G DS + V L+ M+ + CG +E RVF++M +R+VV+WN +++ +
Sbjct: 306 LIHGYILRRG-LDSILPVISALVTMYGR-CGKLEVGQRVFDRMHDRDVVSWNSLISSYGV 363
Query: 123 MGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQL 167
GY + +I +F ML +G +P T S L AC+ L+ GK+L
Sbjct: 364 HGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRL 408
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 406 bits (1043), Expect = e-113, Method: Compositional matrix adjust.
Identities = 229/632 (36%), Positives = 349/632 (55%), Gaps = 52/632 (8%)
Query: 93 GDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSAL 152
GDI+ A RVF M+ +N +TWN ++ +G +D + L P+ T +
Sbjct: 75 GDIDGALRVFHGMRAKNTITWNSLL-----IGISKDPSRMMEAHQLFDEIPEPDTFS--- 126
Query: 153 TACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH 212
++ + C + ++ + ++ F+ MP
Sbjct: 127 -------------------------YNIMLSCYVRNV--------NFEKAQSFFDRMPFK 153
Query: 213 NVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQL 272
+ SW +I GY R G+ ++A LF M++ N S ++ C +L +
Sbjct: 154 DAASWNTMITGYAR-RGEMEKARELFYSMMEKNEVSWNAMISGYIE-CGDL-------EK 204
Query: 273 HSQTIKLGLSAVNCVANSLINMYARSGRLECARKCF-DLLFEKSLVSCETIVDVIVRDLN 331
S K+ ++I Y ++ ++E A F D+ K+LV+ ++ V +
Sbjct: 205 ASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSR 264
Query: 332 SDETLN-HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNA 390
++ L GI S + L G + + + G QIH +V KS +++ +
Sbjct: 265 PEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTS 324
Query: 391 LISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPN 450
LISMY KCG A ++F M ++V+ W ++ISG+A+HG A KAL LF EM++ ++P+
Sbjct: 325 LISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPD 384
Query: 451 DVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFI 510
+T++AVL AC+H GL++ G +F SM + V P+ +HY CMVD+LGR+G L EA++ I
Sbjct: 385 WITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLI 444
Query: 511 NSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWY 570
SMP A V+ +LLG+CRVH N EL E AA+ +L+ + A Y+ L+N+YA++ RW
Sbjct: 445 RSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWE 504
Query: 571 DVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELDELASKIKKLG 630
DVA +RK MK+ ++K GYSWIE+ N+VH F D HP+ I+ +L EL K+K G
Sbjct: 505 DVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAG 564
Query: 631 YVPNTDFVLHDVEDEQKEQYLFQHSEKIAVAFALISIPNPKPIRIFKNLRVCGDCHTAIK 690
Y P +F LH+VE+EQKE+ L HSEK+AVAF I +P I++FKNLR+CGDCH AIK
Sbjct: 565 YKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIK 624
Query: 691 YISKVTGRVIVVRDANRFHHIKDGTCSCNDYW 722
+IS++ R I+VRD RFHH KDG+CSC DYW
Sbjct: 625 FISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 175/374 (46%), Gaps = 52/374 (13%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRA---CSN----SLY 57
+D SW +M++ +A +A F M+E NE + A + C + S +
Sbjct: 153 KDAASWNTMITGYARRGEMEKARELFYSMMEK----NEVSWNAMISGYIECGDLEKASHF 208
Query: 58 FSVGRV---VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQ-ERNVVTW 113
F V V V + + TGY + +E A +F+ M +N+VTW
Sbjct: 209 FKVAPVRGVVAWTAMITGYMKAK----------------KVELAEAMFKDMTVNKNLVTW 252
Query: 114 NLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIR 173
N M++ + + PED + LF ML G P+ L+SAL C+EL L +G+Q+H V +
Sbjct: 253 NAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSK 312
Query: 174 SGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQE 233
S L D+ SL+ MY KC G L D+ ++F M + +VV+W A+I+GY + G +
Sbjct: 313 STLCNDVTALTSLISMYCKC---GELGDAWKLFEVMKKKDVVAWNAMISGYAQ-HGNADK 368
Query: 234 AMRLFCDMLQGNVAPNGFTFSSVLKAC--ANLPDFG---FGEQLHSQTIKLGLSAVNCVA 288
A+ LF +M+ + P+ TF +VL AC A L + G F + ++ C
Sbjct: 369 ALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTC-- 426
Query: 289 NSLINMYARSGRLECARKCFDLL--------FEKSLVSCETIVDVIVRDLNSDETLNHET 340
++++ R+G+LE A K + F L +C +V + + +++ L +
Sbjct: 427 --MVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNS 484
Query: 341 EHTTGIGACSFTYA 354
++ G + YA
Sbjct: 485 QNAAGYVQLANIYA 498
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 108/215 (50%), Gaps = 14/215 (6%)
Query: 1 MGSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSV 60
M ++LV+W +M+S + NS + L F MLE G PN ++AL CS +
Sbjct: 243 MTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQL 302
Query: 61 GRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRF 120
GR + V K+ + V+ LI M+ K CG++ A ++FE M++++VV WN M++ +
Sbjct: 303 GRQIHQIVSKSTLCND-VTALTSLISMYCK-CGELGDAWKLFEVMKKKDVVAWNAMISGY 360
Query: 121 AQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDL 180
AQ G + ++ LF M+ + PD T + L AC L+++G ++R D
Sbjct: 361 AQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVR-----DY 415
Query: 181 CVGCSLVDMYAKCAVD-----GSLVDSRRVFNSMP 210
V D Y C VD G L ++ ++ SMP
Sbjct: 416 KVEPQ-PDHYT-CMVDLLGRAGKLEEALKLIRSMP 448
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 149/358 (41%), Gaps = 61/358 (17%)
Query: 186 LVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGN 245
L + A+C G + + RVF+ M N ++W +L+ G + + EA +LF ++ +
Sbjct: 64 LNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPE-- 121
Query: 246 VAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECAR 305
P+ F+++ +L +F E+ S ++ N++I YAR G +E AR
Sbjct: 122 --PDTFSYNIMLSCYVRNVNF---EKAQSFFDRMPFKDA-ASWNTMITGYARRGEMEKAR 175
Query: 306 KCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGT 365
+ F + EK+ VS + ++SG G
Sbjct: 176 ELFYSMMEKNEVS----------------------------------WNAMISGYIECGD 201
Query: 366 IGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMG-DRNVITWTSIIS 424
+ K + G + A+I+ Y K E A +F DM ++N++TW ++IS
Sbjct: 202 LEKASHFFKVAPVRG----VVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMIS 257
Query: 425 GFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVV 484
G+ ++ L+LF MLE G++PN + L CS + + G R H +V
Sbjct: 258 GYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLG-------RQIHQIV 310
Query: 485 PR------VEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTE 536
+ V ++ + + G L +A + M D + W +++ HGN +
Sbjct: 311 SKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMK-KKDVVAWNAMISGYAQHGNAD 367
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 151/355 (42%), Gaps = 23/355 (6%)
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
+F + + F ++ + C +V+ + E A F++M ++ +WN M+T +A+
Sbjct: 115 LFDEIPEPDTFSYNIMLSC-----YVRNV-NFEKAQSFFDRMPFKDAASWNTMITGYARR 168
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVG 183
G E + +LF+ M+ + S C +LE K H + +
Sbjct: 169 GEMEKARELFYSMMEKNEVSWN-AMISGYIECGDLE-----KASH--FFKVAPVRGVVAW 220
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSMP-EHNVVSWTALIAGYVRGSGQEQEAMRLFCDML 242
+++ Y K A L ++ +F M N+V+W A+I+GYV S E + ++LF ML
Sbjct: 221 TAMITGYMK-AKKVELAEA--MFKDMTVNKNLVTWNAMISGYVENSRPE-DGLKLFRAML 276
Query: 243 QGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLE 302
+ + PN SS L C+ L G Q+H K L SLI+MY + G L
Sbjct: 277 EEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELG 336
Query: 303 CARKCFDLLFEKSLVSCETIVDVIVRDLNSDETL---NHETEHTTGIGACSFTYACLLSG 359
A K F+++ +K +V+ ++ + N+D+ L ++ +F L
Sbjct: 337 DAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACN 396
Query: 360 AACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDR 414
A + IG ++V E ++ + + G E AL++ M R
Sbjct: 397 HAGLVNIGMA-YFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFR 450
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 405 bits (1042), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/590 (36%), Positives = 349/590 (59%), Gaps = 18/590 (3%)
Query: 142 TPDRFTLTSALTACAELELLSVGKQLHSWVIRS-GLALDLCVGCSLVDMYAKCAVDGSLV 200
TP+ +T L AC + L G ++ S ++ + L + + L+ +++ C L
Sbjct: 130 TPEAYT--DLLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCR---RLD 184
Query: 201 DSRRVFNSMPEHNVVS---WTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVL 257
+R++F+ + + ++++ W A+ GY R +G ++A+ ++ DML + P F+ S L
Sbjct: 185 LARKIFDDVTDSSLLTEKVWAAMAIGYSR-NGSPRDALIVYVDMLCSFIEPGNFSISVAL 243
Query: 258 KACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLV 317
KAC +L D G +H+Q +K V N L+ +Y SG + ARK FD + E+++V
Sbjct: 244 KACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVV 303
Query: 318 SCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALV 376
+ +++ V+ + + E N IG T +L + + + G++IHA +
Sbjct: 304 TWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQI 363
Query: 377 VKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKAL 436
+KS + ++ + N+L+ MY KCG E + +VF+ M +++ +W +++ +A +G + +
Sbjct: 364 LKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVI 423
Query: 437 ELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDV 496
LF M+E+GV P+ +T++A+LS CS GL + G F M+ V P +EHYAC+VD+
Sbjct: 424 NLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDI 483
Query: 497 LGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATY 556
LGR+G + EA++ I +MP A +W SLL SCR+HGN +GE AAK + EPH+P Y
Sbjct: 484 LGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNY 543
Query: 557 ILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGD----TSHPQA 612
+++SN+YA + W +V IR+ MKQ+ + KEAG SW++V++++ F G + +
Sbjct: 544 VMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEY 603
Query: 613 QKIYDELDELASKIKKLGYVPNTDFVLHDVEDEQKEQYLFQHSEKIAVAFALISIPNPKP 672
+K++ EL E I+K GY PNT VLHDV++E K ++ HSE++A ++LI P
Sbjct: 604 KKVWTELQE---AIEKSGYSPNTSVVLHDVDEETKANWVCGHSERLATTYSLIHTGEGVP 660
Query: 673 IRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGTCSCNDYW 722
IRI KNLRVC DCH+ +K +S+VT RVIV+RD RFHH DG CSC DYW
Sbjct: 661 IRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 710
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 201/406 (49%), Gaps = 17/406 (4%)
Query: 45 FTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEK 104
+T L AC ++ G + +L + + +LI +F C ++ A ++F+
Sbjct: 134 YTDLLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLF-SVCRRLDLARKIFDD 192
Query: 105 MQERNVVT---WNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELL 161
+ + +++T W M +++ G P D++ ++ ML S P F+++ AL AC +L+ L
Sbjct: 193 VTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDL 252
Query: 162 SVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALI 221
VG+ +H+ +++ +D V L+ +Y + G D+R+VF+ M E NVV+W +LI
Sbjct: 253 RVGRGIHAQIVKRKEKVDQVVYNVLLKLYME---SGLFDDARKVFDGMSERNVVTWNSLI 309
Query: 222 AGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGL 281
+ + + E LF M + + + T +++L AC+ + G+++H+Q +K
Sbjct: 310 S-VLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKE 368
Query: 282 SAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN-HET 340
+ NSL++MY + G +E +R+ FD++ K L S +++ + N +E +N E
Sbjct: 369 KPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEW 428
Query: 341 EHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINN--ALISMYSKC 398
+G+ T+ LLSG + G G + +K+ F + ++ + L+ + +
Sbjct: 429 MIESGVAPDGITFVALLSGCSDTGLTEYGLSLFER-MKTEFRVSPALEHYACLVDILGRA 487
Query: 399 GNKEAALQVFNDMGDR-NVITWTSIISGFAKHGYAT----KALELF 439
G + A++V M + + W S+++ HG + A ELF
Sbjct: 488 GKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELF 533
Score = 133 bits (334), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 161/307 (52%), Gaps = 15/307 (4%)
Query: 10 WCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVL 69
W +M ++ N +AL+ ++DML P + + AL+AC + VGR + ++
Sbjct: 204 WAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIV 263
Query: 70 KTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDS 129
K V L+ ++++ G + A +VF+ M ERNVVTWN +++ ++ +
Sbjct: 264 KRKEKVDQVVYNV-LLKLYMES-GLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEM 321
Query: 130 IDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDM 189
+LF +M TLT+ L AC+ + L GK++H+ +++S D+ + SL+DM
Sbjct: 322 FNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDM 381
Query: 190 YAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPN 249
Y KC G + SRRVF+ M ++ SW ++ Y +G +E + LF M++ VAP+
Sbjct: 382 YGKC---GEVEYSRRVFDVMLTKDLASWNIMLNCYAI-NGNIEEVINLFEWMIESGVAPD 437
Query: 250 GFTFSSVLKACAN--LPDFGFG--EQLHSQ-TIKLGLSAVNCVANSLINMYARSGRLECA 304
G TF ++L C++ L ++G E++ ++ + L C L+++ R+G+++ A
Sbjct: 438 GITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYAC----LVDILGRAGKIKEA 493
Query: 305 RKCFDLL 311
K + +
Sbjct: 494 VKVIETM 500
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 109/223 (48%), Gaps = 11/223 (4%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR 62
S+R++V+W S++S + HE F M E + T L ACS G+
Sbjct: 298 SERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGK 357
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
+ +LK+ V + L+DM+ K CG++E + RVF+ M +++ +WN+M+ +A
Sbjct: 358 EIHAQILKSKE-KPDVPLLNSLMDMYGK-CGEVEYSRRVFDVMLTKDLASWNIMLNCYAI 415
Query: 123 MGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWV---IRSGLALD 179
G E+ I+LF M+ SG PD T + L+ C++ L G L + R AL+
Sbjct: 416 NGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALE 475
Query: 180 LCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVS-WTALI 221
C LVD+ + G + ++ +V +MP S W +L+
Sbjct: 476 -HYAC-LVDILGRA---GKIKEAVKVIETMPFKPSASIWGSLL 513
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 404 bits (1038), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/671 (33%), Positives = 387/671 (57%), Gaps = 33/671 (4%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
+++ VSW ++++ N++ AL F +M + ++ + + LR+C+ +G
Sbjct: 243 EKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQ 302
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
+ LK+ + + V +DM+ K C +++ A +F+ + N ++N M+T ++Q
Sbjct: 303 LHAHALKSDFAADGI-VRTATLDMYAK-CDNMQDAQILFDNSENLNRQSYNAMITGYSQE 360
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVG 183
+ ++ LF R++ SG D +L+ ACA ++ LS G Q++ I+S L+LD+CV
Sbjct: 361 EHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVA 420
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQ 243
+ +DMY KC +L ++ RVF+ M + VSW A+IA + + +G+ E + LF ML+
Sbjct: 421 NAAIDMYGKCQ---ALAEAFRVFDEMRRRDAVSWNAIIAAHEQ-NGKGYETLFLFVSMLR 476
Query: 244 GNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLEC 303
+ P+ FTF S+LKAC G+G ++HS +K G+++ + V SLI+MY++ G +E
Sbjct: 477 SRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEE 535
Query: 304 ARKCFDLLFEKSLVSC---------------------ETIVDVIVRDLNSDETLNHETEH 342
A K F+++ VS I ++++ + D +
Sbjct: 536 AEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMM 595
Query: 343 TTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKE 402
GI FTYA +L A + + G G+QIHA V+K ++++ I + L+ MYSKCG+
Sbjct: 596 EMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLH 655
Query: 403 AALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACS 462
+ +F R+ +TW ++I G+A HG +A++LF M+ +KPN VT+I++L AC+
Sbjct: 656 DSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACA 715
Query: 463 HVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVW 522
H+GLID+G ++F M+ +G+ P++ HY+ MVD+LG+SG + A+E I MP +AD ++W
Sbjct: 716 HMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIW 775
Query: 523 RSLLGSCRVH-GNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQ 581
R+LLG C +H N E+ E A +L +P D + Y LLSN+YA W V+ +R+ M+
Sbjct: 776 RTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRG 835
Query: 582 KKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTDFVLHD 641
K+ KE G SW+E+++++H F VGD +HP+ ++IY+EL + S++K ++ FV
Sbjct: 836 FKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMKPF---DDSSFV-RG 891
Query: 642 VEDEQKEQYLF 652
VE E+++Q+ +
Sbjct: 892 VEVEEEDQWCY 902
Score = 207 bits (526), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 174/588 (29%), Positives = 278/588 (47%), Gaps = 57/588 (9%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
RD+VSW SM+S + N +++ F+DM G + F L+ CS S+G +
Sbjct: 143 RDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQI 202
Query: 65 FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG 124
G V++ G D+ V L+DM+ KG +ES RVF+ + E+N V+W+ ++ Q
Sbjct: 203 HGIVVRVGC-DTDVVAASALLDMYAKGKRFVESL-RVFQGIPEKNSVSWSAIIAGCVQNN 260
Query: 125 YPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGC 184
++ F M + S L +CA L L +G QLH+ ++S A D V
Sbjct: 261 LLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRT 320
Query: 185 SLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQ---EAMRLFCDM 241
+ +DMYAKC ++ D++ +F++ N S+ A+I GY QE+ +A+ LF +
Sbjct: 321 ATLDMYAKC---DNMQDAQILFDNSENLNRQSYNAMITGY----SQEEHGFKALLLFHRL 373
Query: 242 LQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRL 301
+ + + + S V +ACA + G Q++ IK LS CVAN+ I+MY + L
Sbjct: 374 MSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQAL 433
Query: 302 ECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGA 360
A + FD + + VS I+ ++ ETL + + I FT+ +L
Sbjct: 434 AEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILK-- 491
Query: 361 ACI-GTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDR-NV-- 416
AC G++G G +IH+ +VKSG +N S+ +LI MYSKCG E A ++ + R NV
Sbjct: 492 ACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSG 551
Query: 417 -----------------ITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLS 459
++W SIISG+ + A LF M+E G+ P+ TY VL
Sbjct: 552 TMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLD 611
Query: 460 ACSHVGLIDEGWKHFNSMRHCHGVVPRVEH----YAC--MVDVLGRSGLLSEAIEFINSM 513
C+++ G + H V + E Y C +VD+ + G L ++ +
Sbjct: 612 TCANLASAGLG-------KQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDS-RLMFEK 663
Query: 514 PLDADAMVWRSLLGSCRVHGNTELGEHA----AKMILEREPHDPATYI 557
L D + W +++ HG GE A +MILE + T+I
Sbjct: 664 SLRRDFVTWNAMICGYAHHGK---GEEAIQLFERMILENIKPNHVTFI 708
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 137/479 (28%), Positives = 240/479 (50%), Gaps = 21/479 (4%)
Query: 33 MLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGC 92
M+ GF P + L+ +NS F +VF K D V ++I+ + K
Sbjct: 74 MIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFD---KMPLRD--VVSWNKMINGYSKS- 127
Query: 93 GDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSAL 152
D+ A+ F M R+VV+WN M++ + Q G SI++F M G D T L
Sbjct: 128 NDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIIL 187
Query: 153 TACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH 212
C+ LE S+G Q+H V+R G D+ +L+DMYAK V+S RVF +PE
Sbjct: 188 KVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAK---GKRFVESLRVFQGIPEK 244
Query: 213 NVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQL 272
N VSW+A+IAG V+ + A++ F +M + N + ++SVL++CA L + G QL
Sbjct: 245 NSVSWSAIIAGCVQNNLLSL-ALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQL 303
Query: 273 HSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNS 332
H+ +K +A V + ++MYA+ ++ A+ +LF+ S + ++ +
Sbjct: 304 HAHALKSDFAADGIVRTATLDMYAKCDNMQDAQ----ILFDNSENLNRQSYNAMITGYSQ 359
Query: 333 DE-----TLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSI 387
+E L ++G+G + + + A + + +G QI+ L +KS ++ +
Sbjct: 360 EEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCV 419
Query: 388 NNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGV 447
NA I MY KC A +VF++M R+ ++W +II+ ++G + L LF ML + +
Sbjct: 420 ANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRI 479
Query: 448 KPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEA 506
+P++ T+ ++L AC+ G + G + +S+ G+ ++D+ + G++ EA
Sbjct: 480 EPDEFTFGSILKACTG-GSLGYGMEIHSSIVKS-GMASNSSVGCSLIDMYSKCGMIEEA 536
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 90/206 (43%), Gaps = 51/206 (24%)
Query: 364 GTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSII 423
G + G+Q HA ++ SGF + N L+ +Y+ + +A VF+ M R+V++W +I
Sbjct: 62 GALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMI 121
Query: 424 SGFAK-------------------------------HGYATKALELFYEMLETGVKPNDV 452
+G++K +G + K++E+F +M G++ +
Sbjct: 122 NGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGR 181
Query: 453 TYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLS-------- 504
T+ +L CS + G + HG+V RV C DV+ S LL
Sbjct: 182 TFAIILKVCSFLEDTSLGMQ-------IHGIVVRV---GCDTDVVAASALLDMYAKGKRF 231
Query: 505 -EAIEFINSMPLDADAMVWRSLLGSC 529
E++ +P + +++ W +++ C
Sbjct: 232 VESLRVFQGIP-EKNSVSWSAIIAGC 256
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 403 bits (1036), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/588 (37%), Positives = 340/588 (57%), Gaps = 27/588 (4%)
Query: 155 CAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKC-AVDGSLVD---SRRVFNSMP 210
C+++ L KQLH++ +R+ + + + +Y K + S D + RVF+S+
Sbjct: 58 CSDMSQL---KQLHAFTLRTTYPEEP----ATLFLYGKILQLSSSFSDVNYAFRVFDSIE 110
Query: 211 EHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQ-GNVAPNGFTFSSVLKACANLPDFGFG 269
H+ W LI +++EA L+ ML+ G +P+ TF VLKACA + F G
Sbjct: 111 NHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEG 170
Query: 270 EQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRD 329
+Q+H Q +K G V N LI++Y G L+ ARK FD + E+SLVS +++D +VR
Sbjct: 171 KQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRF 230
Query: 330 LNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKS---GFETNLS 386
D L E +T +LS A +G++ G HA +++ ++
Sbjct: 231 GEYDSALQLFREMQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVL 290
Query: 387 INNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLET- 445
+ N+LI MY KCG+ A QVF M R++ +W ++I GFA HG A +A+ F M++
Sbjct: 291 VKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKR 350
Query: 446 -GVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLS 504
V+PN VT++ +L AC+H G +++G ++F+ M + + P +EHY C+VD++ R+G ++
Sbjct: 351 ENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYIT 410
Query: 505 EAIEFINSMPLDADAMVWRSLLGSCRVHG-NTELGEHAAKMILEREPHDPAT-------Y 556
EAI+ + SMP+ DA++WRSLL +C G + EL E A+ I+ + + ++ Y
Sbjct: 411 EAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAY 470
Query: 557 ILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIY 616
+LLS +YA+ RW DV +RK M + I KE G S IE+ H+F GDTSHPQ ++IY
Sbjct: 471 VLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIY 530
Query: 617 DELDELASKIKKLGYVPNTD--FVLHDVEDEQKEQYLFQHSEKIAVAFALISIPNPKPIR 674
+L + +++ +GY+P+ ++ D KE L HSE++A+AF LI++P PIR
Sbjct: 531 QQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQTPIR 590
Query: 675 IFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGTCSCNDYW 722
IFKNLRVC DCH K ISKV I+VRD RFHH KDG+CSC DYW
Sbjct: 591 IFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
Score = 140 bits (354), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 164/302 (54%), Gaps = 23/302 (7%)
Query: 10 WCSMM-SCFANNSMEHEALVTFLDMLEHG-FYPNEYCFTAALRACSNSLYFSVGRVVFGS 67
W +++ +C + S + EA + + MLE G P+++ F L+AC+ FS G+ V
Sbjct: 117 WNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQ 176
Query: 68 VLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPE 127
++K G F V V LI ++ CG ++ A +VF++M ER++V+WN M+ + G +
Sbjct: 177 IVKHG-FGGDVYVNNGLIHLY-GSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYD 234
Query: 128 DSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRS---GLALDLCVGC 184
++ L FR + + PD +T+ S L+ACA L LS+G H++++R +A+D+ V
Sbjct: 235 SALQL-FREMQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKN 293
Query: 185 SLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDML-- 242
SL++MY KC GSL + +VF M + ++ SW A+I G+ G+ +EAM F M+
Sbjct: 294 SLIEMYCKC---GSLRMAEQVFQGMQKRDLASWNAMILGFA-THGRAEEAMNFFDRMVDK 349
Query: 243 QGNVAPNGFTFSSVLKACANLPDFGFGEQ-----LHSQTIKLGLSAVNCVANSLINMYAR 297
+ NV PN TF +L AC + G Q + I+ L C+ +++ AR
Sbjct: 350 RENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCI----VDLIAR 405
Query: 298 SG 299
+G
Sbjct: 406 AG 407
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 170/354 (48%), Gaps = 15/354 (4%)
Query: 94 DIESAHRVFEKMQERNVVTWNLMMTRFAQ-MGYPEDSIDLFFRMLLSG-YTPDRFTLTSA 151
D+ A RVF+ ++ + WN ++ A + E++ L+ +ML G +PD+ T
Sbjct: 98 DVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFV 157
Query: 152 LTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPE 211
L ACA + S GKQ+H +++ G D+ V L+ +Y C G L +R+VF+ MPE
Sbjct: 158 LKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSC---GCLDLARKVFDEMPE 214
Query: 212 HNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQ 271
++VSW ++I VR G+ A++LF +M Q + P+G+T SVL ACA L G
Sbjct: 215 RSLVSWNSMIDALVR-FGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTW 272
Query: 272 LHSQTIK---LGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVR 328
H+ ++ + ++ V NSLI MY + G L A + F + ++ L S ++
Sbjct: 273 AHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFAT 332
Query: 329 DLNSDETLN---HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKS-GFETN 384
++E +N + + S T+ LL G + KG Q ++V+ E
Sbjct: 333 HGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPA 392
Query: 385 LSINNALISMYSKCGNKEAALQVFNDMGDR-NVITWTSIISGFAKHGYATKALE 437
L ++ + ++ G A+ + M + + + W S++ K G + + E
Sbjct: 393 LEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSE 446
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 133/293 (45%), Gaps = 32/293 (10%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
+R LVSW SM+ AL F +M + F P+ Y + L AC+ S+G
Sbjct: 214 ERSLVSWNSMIDALVRFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTW 272
Query: 64 VFGSVLKTGYFD--SHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFA 121
+L+ D V V LI+M+ K CG + A +VF+ MQ+R++ +WN M+ FA
Sbjct: 273 AHAFLLRKCDVDVAMDVLVKNSLIEMYCK-CGSLRMAEQVFQGMQKRDLASWNAMILGFA 331
Query: 122 QMGYPEDSIDLFFRML--LSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALD 179
G E++++ F RM+ P+ T L AC ++ G+Q ++R D
Sbjct: 332 THGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVR-----D 386
Query: 180 LCV-------GCSLVDMYAKCAVDGSLVDSRRVFNSMP-EHNVVSWTALI-AGYVRGSGQ 230
C+ GC +VD+ A+ G + ++ + SMP + + V W +L+ A +G+
Sbjct: 387 YCIEPALEHYGC-IVDLIARA---GYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASV 442
Query: 231 E--QEAMRLFCDMLQGNVAPNG------FTFSSVLKACANLPDFGFGEQLHSQ 275
E +E R + N + NG S V + + D G +L S+
Sbjct: 443 ELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSE 495
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 401 bits (1031), Expect = e-112, Method: Compositional matrix adjust.
Identities = 242/731 (33%), Positives = 396/731 (54%), Gaps = 28/731 (3%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR 62
+K D W M+ F + + EA+ + M+ G + + + +++ + G+
Sbjct: 91 NKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGK 150
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVK-GCGDIESAHRVFEKMQERNVVTWNLMMTRFA 121
+ V+K G F S V V LI +++K GC A +VFE+M ER++V+WN M++ +
Sbjct: 151 KIHAMVIKLG-FVSDVYVCNSLISLYMKLGCA--WDAEKVFEEMPERDIVSWNSMISGYL 207
Query: 122 QMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLAL-DL 180
+G S+ LF ML G+ PDRF+ SAL AC+ + +GK++H +RS + D+
Sbjct: 208 ALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDV 267
Query: 181 CVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCD 240
V S++DMY+K G + + R+FN M + N+V+W +I Y R +G+ +A F
Sbjct: 268 MVMTSILDMYSKY---GEVSYAERIFNGMIQRNIVAWNVMIGCYAR-NGRVTDAFLCFQK 323
Query: 241 MLQGN-VAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSG 299
M + N + P+ T ++L A A L G +H ++ G + +LI+MY G
Sbjct: 324 MSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHMVLETALIDMYGECG 379
Query: 300 RLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETE-HTTGIGACSFTYACLLS 358
+L+ A FD + EK+++S +I+ V++ + L E + + S T A +L
Sbjct: 380 QLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILP 439
Query: 359 GAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVIT 418
A ++ +G +IHA +VKS + +N I N+L+ MY+ CG+ E A + FN + ++V++
Sbjct: 440 AYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVS 499
Query: 419 WTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMR 478
W SII +A HG+ ++ LF EM+ + V PN T+ ++L+ACS G++DEGW++F SM+
Sbjct: 500 WNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMK 559
Query: 479 HCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELG 538
+G+ P +EHY CM+D++GR+G S A F+ MP A +W SLL + R H + +
Sbjct: 560 REYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIA 619
Query: 539 EHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQ 598
E AA+ I + E + Y+LL N+YA RW DV I+ M+ K I + + S +E + +
Sbjct: 620 EFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGK 679
Query: 599 VHKFHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTDFVLHDVEDEQKEQYL------- 651
H F GD SH KIY+ LD ++ V D +H V + E +
Sbjct: 680 SHVFTNGDRSHVATNKIYEVLDVVSR------MVGEEDIYVHCVSRLRPETLVKSRSNSP 733
Query: 652 FQHSEKIAVAFALISIPNPKPIRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHI 711
+HS ++A F LIS + + + N R+C CH ++ S++T R IVV D+ FHH
Sbjct: 734 RRHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEFLEKASRLTRREIVVGDSKIFHHF 793
Query: 712 KDGTCSCNDYW 722
+G CSC +YW
Sbjct: 794 SNGRCSCGNYW 804
Score = 193 bits (490), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 119/448 (26%), Positives = 230/448 (51%), Gaps = 25/448 (5%)
Query: 95 IESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTA 154
+E A ++F++M + + WN+M+ F G +++ + RM+ +G D FT + +
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139
Query: 155 CAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNV 214
A + L GK++H+ VI+ G D+ V SL+ +Y K G D+ +VF MPE ++
Sbjct: 140 VAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKL---GCAWDAEKVFEEMPERDI 196
Query: 215 VSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHS 274
VSW ++I+GY+ G ++ LF +ML+ P+ F+ S L AC+++ G+++H
Sbjct: 197 VSWNSMISGYL-ALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHC 255
Query: 275 QTIKLGLSAVNC-VANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSD 333
++ + + V S+++MY++ G + A + F+ + ++++V+ ++ R+
Sbjct: 256 HAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVT 315
Query: 334 ETL--NHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNAL 391
+ + G+ T LL +A I +G IH ++ GF ++ + AL
Sbjct: 316 DAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMRRGFLPHMVLETAL 371
Query: 392 ISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPND 451
I MY +CG ++A +F+ M ++NVI+W SII+ + ++G ALELF E+ ++ + P+
Sbjct: 372 IDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDS 431
Query: 452 VTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYA------CMVDVLGRSGLLSE 505
T ++L A + + EG R H + + +++ +V + G L +
Sbjct: 432 TTIASILPAYAESLSLSEG-------REIHAYIVKSRYWSNTIILNSLVHMYAMCGDLED 484
Query: 506 AIEFINSMPLDADAMVWRSLLGSCRVHG 533
A + N + L D + W S++ + VHG
Sbjct: 485 ARKCFNHILLK-DVVSWNSIIMAYAVHG 511
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 398 bits (1023), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/559 (36%), Positives = 323/559 (57%), Gaps = 4/559 (0%)
Query: 166 QLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYV 225
Q+ ++ I+S + D+ L++ + + S+ +R +F +M E ++V + ++ GY
Sbjct: 47 QIQAYAIKSHIE-DVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGYS 105
Query: 226 RGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVN 285
R + E LF ++L+ + P+ +TF S+LKACA G QLH ++KLGL
Sbjct: 106 RFTNP-LEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNV 164
Query: 286 CVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETE-HTT 344
V +LINMY ++ AR FD + E +V ++ R +E L+ E
Sbjct: 165 YVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGK 224
Query: 345 GIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAA 404
+ T +LS A +G++ G+ IH K F + +N ALI M++KCG+ + A
Sbjct: 225 YLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDA 284
Query: 405 LQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHV 464
+ +F M ++ W+++I +A HG A K++ +F M V+P+++T++ +L+ACSH
Sbjct: 285 VSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHT 344
Query: 465 GLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRS 524
G ++EG K+F+ M G+VP ++HY MVD+L R+G L +A EFI+ +P+ M+WR
Sbjct: 345 GRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRI 404
Query: 525 LLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKI 584
LL +C H N +L E ++ I E + Y++LSNLYA ++W V ++RK MK +K
Sbjct: 405 LLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKA 464
Query: 585 IKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTDFVLH-DVE 643
+K G S IEV N VH+F GD K++ LDE+ ++K GYVP+T V+H ++
Sbjct: 465 VKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVHANMN 524
Query: 644 DEQKEQYLFQHSEKIAVAFALISIPNPKPIRIFKNLRVCGDCHTAIKYISKVTGRVIVVR 703
D++KE L HSEK+A+ F L++ P IR+ KNLRVC DCH A K IS + GR +V+R
Sbjct: 525 DQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVLR 584
Query: 704 DANRFHHIKDGTCSCNDYW 722
D RFHH +DG CSC D+W
Sbjct: 585 DVQRFHHFEDGKCSCGDFW 603
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 165/310 (53%), Gaps = 7/310 (2%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR 62
S+ D+V + SM ++ + E F+++LE G P+ Y F + L+AC+ + GR
Sbjct: 90 SEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGR 149
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
+ +K G D +V V LI+M+ + C D++SA VF+++ E VV +N M+T +A+
Sbjct: 150 QLHCLSMKLG-LDDNVYVCPTLINMYTE-CEDVDSARCVFDRIVEPCVVCYNAMITGYAR 207
Query: 123 MGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCV 182
P +++ LF M P+ TL S L++CA L L +GK +H + + + V
Sbjct: 208 RNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKV 267
Query: 183 GCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDML 242
+L+DM+AKC GSL D+ +F M + +W+A+I Y G+ +++M +F M
Sbjct: 268 NTALIDMFAKC---GSLDDAVSIFEKMRYKDTQAWSAMIVAYA-NHGKAEKSMLMFERMR 323
Query: 243 QGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTI-KLGLSAVNCVANSLINMYARSGRL 301
NV P+ TF +L AC++ G + SQ + K G+ S++++ +R+G L
Sbjct: 324 SENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNL 383
Query: 302 ECARKCFDLL 311
E A + D L
Sbjct: 384 EDAYEFIDKL 393
Score = 125 bits (315), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 167/352 (47%), Gaps = 12/352 (3%)
Query: 98 AHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAE 157
A +FE M E ++V +N M +++ P + LF +L G PD +T S L ACA
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 158 LELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRR-VFNSMPEHNVVS 216
+ L G+QLH ++ GL ++ V +L++MY +C VDS R VF+ + E VV
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECED----VDSARCVFDRIVEPCVVC 197
Query: 217 WTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQT 276
+ A+I GY R + EA+ LF +M + PN T SVL +CA L G+ +H
Sbjct: 198 YNAMITGYAR-RNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYA 256
Query: 277 IKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDET- 335
K V +LI+M+A+ G L+ A F+ + K + ++ ++++
Sbjct: 257 KKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSM 316
Query: 336 LNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHA-LVVKSGFETNLSINNALISM 394
L E + + T+ LL+ + G + +G + + +V K G ++ +++ +
Sbjct: 317 LMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDL 376
Query: 395 YSKCGNKEAALQVFNDMG-DRNVITWTSIISGFAKHG---YATKALELFYEM 442
S+ GN E A + + + + W +++ + H A K E +E+
Sbjct: 377 LSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFEL 428
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 397 bits (1021), Expect = e-110, Method: Compositional matrix adjust.
Identities = 225/618 (36%), Positives = 350/618 (56%), Gaps = 9/618 (1%)
Query: 6 DLVSWCSMMSCF--ANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
D+VSW S++ + ANNS E L + + +++H P+ + L+AC S + G
Sbjct: 70 DIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGES 129
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
+ +KT S V VG L+DM+ K G I+ + RVF +M RN VTW ++T
Sbjct: 130 LHAYAVKTSLLSS-VYVGSSLLDMY-KRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHA 187
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVG 183
G ++ + F M S D +T AL ACA L + GK +H+ VI G LCV
Sbjct: 188 GRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVA 247
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQ 243
SL MY +C G + D +F +M E +VVSWT+LI Y R GQE +A+ F M
Sbjct: 248 NSLATMYTEC---GEMQDGLCLFENMSERDVVSWTSLIVAYKR-IGQEVKAVETFIKMRN 303
Query: 244 GNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLEC 303
V PN TF+S+ ACA+L +GEQLH + LGL+ V+NS++ MY+ G L
Sbjct: 304 SQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVS 363
Query: 304 ARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHET-EHTTGIGACSFTYACLLSGAAC 362
A F + + ++S TI+ + +E + + +G F A LLS +
Sbjct: 364 ASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGN 423
Query: 363 IGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSI 422
+ I G Q+HAL + G E N ++ ++LI+MYSKCG+ + A +F + ++++ T++
Sbjct: 424 MAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAM 483
Query: 423 ISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHG 482
I+G+A+HG + +A++LF + L+ G +P+ VT+I+VL+AC+H G +D G+ +FN M+ +
Sbjct: 484 INGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYN 543
Query: 483 VVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAA 542
+ P EHY CMVD+L R+G LS+A + IN M D +VW +LL +C+ G+ E G AA
Sbjct: 544 MRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAA 603
Query: 543 KMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKF 602
+ ILE +P + L+N+Y++ + A +RK MK K +IKE G+S I++++ V F
Sbjct: 604 ERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAF 663
Query: 603 HVGDTSHPQAQKIYDELD 620
GD HPQ++ IY+ L+
Sbjct: 664 VSGDRFHPQSEDIYNILE 681
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 141/532 (26%), Positives = 257/532 (48%), Gaps = 48/532 (9%)
Query: 93 GDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLF--FRMLLSGYTPDRFTLTS 150
G++ +A +VF+KM ++V+W ++ R+ ++++ LF R++ +PD L+
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 151 ALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMP 210
L AC + ++ G+ LH++ +++ L + VG SL+DMY + G + S RVF+ MP
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRV---GKIDKSCRVFSEMP 170
Query: 211 EHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGE 270
N V+WTA+I G V +G+ +E + F +M + + +TF+ LKACA L +G+
Sbjct: 171 FRNAVTWTAIITGLVH-AGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGK 229
Query: 271 QLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIV---DVIV 327
+H+ I G CVANSL MY G ++ F+ + E+ +VS +++ I
Sbjct: 230 AIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIG 289
Query: 328 RDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSI 387
+++ + ET + + T+A + S A + + GEQ+H V+ G +LS+
Sbjct: 290 QEVKAVETFIK--MRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSV 347
Query: 388 NNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGV 447
+N+++ MYS CGN +A +F M R++I+W++II G+ + G+ + + F M ++G
Sbjct: 348 SNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGT 407
Query: 448 KPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAI 507
KP D ++LS ++ +I EG + +++ C G+ + ++++ + G + EA
Sbjct: 408 KPTDFALASLLSVSGNMAVI-EGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEAS 466
Query: 508 EFINSMPLD----------------------------------ADAMVWRSLLGSCRVHG 533
D D++ + S+L +C G
Sbjct: 467 MIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSG 526
Query: 534 NTELGEHAAKMILEREPHDPAT--YILLSNLYATEERWYDVAAIRKTMKQKK 583
+LG H M+ E PA Y + +L R D + M KK
Sbjct: 527 QLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKK 578
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 107/422 (25%), Positives = 198/422 (46%), Gaps = 9/422 (2%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
R+ V+W ++++ + E L F +M + Y F AL+AC+ G+ +
Sbjct: 172 RNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAI 231
Query: 65 FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG 124
V+ G F + + V L M+ + CG+++ +FE M ER+VV+W ++ + ++G
Sbjct: 232 HTHVIVRG-FVTTLCVANSLATMYTE-CGEMQDGLCLFENMSERDVVSWTSLIVAYKRIG 289
Query: 125 YPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGC 184
+++ F +M S P+ T S +ACA L L G+QLH V+ GL L V
Sbjct: 290 QEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSN 349
Query: 185 SLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQG 244
S++ MY+ C G+LV + +F M +++SW+ +I GY + +G +E + F M Q
Sbjct: 350 SMMKMYSTC---GNLVSASVLFQGMRCRDIISWSTIIGGYCQ-AGFGEEGFKYFSWMRQS 405
Query: 245 NVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECA 304
P F +S+L N+ G Q+H+ + GL + V +SLINMY++ G ++ A
Sbjct: 406 GTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEA 465
Query: 305 RKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGAACI 363
F +VS +++ S E ++ E G S T+ +L+
Sbjct: 466 SMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHS 525
Query: 364 GTIGKGEQIHALVVKS-GFETNLSINNALISMYSKCGNKEAALQVFNDMG-DRNVITWTS 421
G + G ++ ++ ++ + + G A ++ N+M ++ + WT+
Sbjct: 526 GQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTT 585
Query: 422 II 423
++
Sbjct: 586 LL 587
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 128/473 (27%), Positives = 211/473 (44%), Gaps = 87/473 (18%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR 62
S+RD+VSW S++ + E +A+ TF+ M PNE F + AC+ S+ R
Sbjct: 271 SERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACA-----SLSR 325
Query: 63 VVFG-----SVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMM 117
+V+G +VL G DS +SV ++ M+ CG++ SA +F+ M+ R++++W+ ++
Sbjct: 326 LVWGEQLHCNVLSLGLNDS-LSVSNSMMKMY-STCGNLVSASVLFQGMRCRDIISWSTII 383
Query: 118 TRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLA 177
+ Q G+ E+ F M SG P F L S L+ + ++ G+Q+H+ + GL
Sbjct: 384 GGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLE 443
Query: 178 LDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRL 237
+ V SL++MY+KC GS+ ++ +F ++VS TA+I GY G+ +EA+ L
Sbjct: 444 QNSTVRSSLINMYSKC---GSIKEASMIFGETDRDDIVSLTAMINGYAE-HGKSKEAIDL 499
Query: 238 FCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANS------- 290
F L+ P+ TF SVL AC HS + LG N + +
Sbjct: 500 FEKSLKVGFRPDSVTFISVLTACT-----------HSGQLDLGFHYFNMMQETYNMRPAK 548
Query: 291 -----LINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTG 345
++++ R+GRL A K + + K DV+
Sbjct: 549 EHYGCMVDLLCRAGRLSDAEKMINEMSWKK-------DDVV------------------- 582
Query: 346 IGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISM---YSKCGNKE 402
+ LL G I +G + ++ E + + AL+++ YS GN E
Sbjct: 583 -------WTTLLIACKAKGDIERGRRAAERIL----ELDPTCATALVTLANIYSSTGNLE 631
Query: 403 AALQVFNDMGDRNVIT---WTSI-----ISGFAKHGYATKALELFYEMLETGV 447
A V +M + VI W+SI +S F E Y +LE V
Sbjct: 632 EAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILELAV 684
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 121/281 (43%), Gaps = 30/281 (10%)
Query: 290 SLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETL---------NHET 340
SLIN +G L AR+ FD + +VS +I+ V NSDE L +H
Sbjct: 49 SLIN----AGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAV 104
Query: 341 EHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGN 400
T + + +L I GE +HA VK+ +++ + ++L+ MY + G
Sbjct: 105 SPDTSV------LSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGK 158
Query: 401 KEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSA 460
+ + +VF++M RN +TWT+II+G G + L F EM + + T+ L A
Sbjct: 159 IDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKA 218
Query: 461 CSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLG----RSGLLSEAIEFINSMPLD 516
C+ + + G H H +V C+ + L G + + + +M +
Sbjct: 219 CAGLRQVKYG-----KAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMS-E 272
Query: 517 ADAMVWRSLL-GSCRVHGNTELGEHAAKMILEREPHDPATY 556
D + W SL+ R+ + E KM + P + T+
Sbjct: 273 RDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTF 313
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 397 bits (1019), Expect = e-110, Method: Compositional matrix adjust.
Identities = 224/617 (36%), Positives = 346/617 (56%), Gaps = 52/617 (8%)
Query: 152 LTACAELELLSVGKQLHSWVIRSGL--ALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSM 209
L CA L GK+LH+ + SGL A + +L YA G +V ++++F+ +
Sbjct: 13 LRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYAS---SGEMVTAQKLFDEI 69
Query: 210 P--EHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFG 267
P E + V WT L++ + R G +M+LF +M + V + + + CA L D G
Sbjct: 70 PLSEKDNVDWTTLLSSFSR-YGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLG 128
Query: 268 FGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIV 327
F +Q H +K+G+ V N+L++MY + G + ++ F+ L EKS+VS ++D +V
Sbjct: 129 FAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVV 188
Query: 328 R--DLNSDETLNHETEHTTGIG------------------------------ACSFTYAC 355
+ L + HE + +F C
Sbjct: 189 KWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLC 248
Query: 356 -LLSGAACIGTIGKGEQIHALVVKS----GFET---NLSINNALISMYSKCGNKEAALQV 407
+LS A G + G +H +K G E ++ + AL+ MY+KCGN ++++ V
Sbjct: 249 SMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNV 308
Query: 408 FNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLI 467
F M RNV+TW ++ SG A HG +++F +M+ VKP+D+T+ AVLSACSH G++
Sbjct: 309 FRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIV 367
Query: 468 DEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLG 527
DEGW+ F+S+R +G+ P+V+HYACMVD+LGR+GL+ EA + MP+ + +V SLLG
Sbjct: 368 DEGWRCFHSLRF-YGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLG 426
Query: 528 SCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKE 587
SC VHG E+ E + +++ P + IL+SN+Y E R +R +++++ I K
Sbjct: 427 SCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKI 486
Query: 588 AGYSWIEVENQVHKFHVGDTSHPQAQKIYDELDELASKIKKLGYVPN-TDFVLHDVED-E 645
G S I V + VH+F GD SHP+ ++IY +L+E+ +I+ GYVP+ + V H D E
Sbjct: 487 PGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLVSHSEGDLE 546
Query: 646 QKEQYLFQHSEKIAVAFALISIPNPKPIRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDA 705
+KEQ L HSEK+AV F L+ P+ +FKNLR+C DCH+A+K +SKV R I++RD
Sbjct: 547 EKEQALCCHSEKLAVCFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDR 606
Query: 706 NRFHHIKDGTCSCNDYW 722
NRFH K G+CSC+DYW
Sbjct: 607 NRFHQFKGGSCSCSDYW 623
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/450 (21%), Positives = 196/450 (43%), Gaps = 42/450 (9%)
Query: 49 LRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEK--MQ 106
LR C++ + G+ + + +G + S + F G++ +A ++F++ +
Sbjct: 13 LRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLS 72
Query: 107 ERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQ 166
E++ V W +++ F++ G +S+ LF M D ++ CA+LE L +Q
Sbjct: 73 EKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQ 132
Query: 167 LHSWVIRSGLALDLCVGCSLVDMYAKCAV------------DGSLVD------------- 201
H ++ G+ + V +L+DMY KC + + S+V
Sbjct: 133 GHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEG 192
Query: 202 ---SRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDML-QGNVAPNGFTFSSVL 257
R VF+ MPE N V+WT ++AGY+ G+G +E + L +M+ + N T S+L
Sbjct: 193 LERGREVFHEMPERNAVAWTVMVAGYL-GAGFTREVLELLAEMVFRCGHGLNFVTLCSML 251
Query: 258 KACANLPDFGFGEQLHSQTIK----LGLSAVN---CVANSLINMYARSGRLECARKCFDL 310
ACA + G +H +K +G A V +L++MYA+ G ++ + F L
Sbjct: 252 SACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRL 311
Query: 311 LFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGE 370
+ ++++V+ + + ++ + + T+ +LS + G + +G
Sbjct: 312 MRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIREVKPDDLTFTAVLSACSHSGIVDEGW 371
Query: 371 QIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMG-DRNVITWTSIISGFAKH 429
+ + G E + ++ + + G E A + +M N + S++ + H
Sbjct: 372 RCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVH 431
Query: 430 GYATKALELFYEMLETGVKPNDVTYIAVLS 459
G A + E+++ + P + Y ++S
Sbjct: 432 GKVEIAERIKRELIQ--MSPGNTEYQILMS 459
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 148/351 (42%), Gaps = 49/351 (13%)
Query: 256 VLKACANLPDFGFGEQLHSQTIKLGLSAV--NCVANSLINMYARSGRLECARKCFD--LL 311
+L+ CA+ G++LH+ GL + ++N+L YA SG + A+K FD L
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 312 FEKSLVSCETIVDVIVRD---LNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGK 368
EK V T++ R +NS + I S CL A + +G
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVV--CLFGVCAKLEDLGF 129
Query: 369 GEQIHALVVKSGFETNLSINNALISMYSKCG----------------------------- 399
+Q H + VK G T++ + NAL+ MY KCG
Sbjct: 130 AQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVK 189
Query: 400 --NKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEML-ETGVKPNDVTYIA 456
E +VF++M +RN + WT +++G+ G+ + LEL EM+ G N VT +
Sbjct: 190 WEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCS 249
Query: 457 VLSACSHVG-LIDEGWKHFNSMRHCHGVVPRVEHYACM-----VDVLGRSGLLSEAIEFI 510
+LSAC+ G L+ W H +++ + + M VD+ + G + ++
Sbjct: 250 MLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVF 309
Query: 511 NSMPLDADAMVWRSLLGSCRVHGNTELG-EHAAKMILEREPHDPATYILLS 560
M + + W +L +HG + + +MI E +P D +LS
Sbjct: 310 RLMR-KRNVVTWNALFSGLAMHGKGRMVIDMFPQMIREVKPDDLTFTAVLS 359
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 395 bits (1015), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/639 (32%), Positives = 358/639 (56%), Gaps = 8/639 (1%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
++D V W M++ +A + F M PN F L C++ L +G
Sbjct: 201 QKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQ 260
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
+ G V+ +G D S+ L+ M+ K CG + A ++F M + VTWN M++ + Q
Sbjct: 261 LHGLVVVSG-VDFEGSIKNSLLSMYSK-CGRFDDASKLFRMMSRADTVTWNCMISGYVQS 318
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVG 183
G E+S+ F+ M+ SG PD T +S L + ++ E L KQ+H +++R ++LD+ +
Sbjct: 319 GLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLT 378
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQ 243
+L+D Y KC + ++ +F+ +VV +TA+I+GY+ +G +++ +F +++
Sbjct: 379 SALIDAYFKCR---GVSMAQNIFSQCNSVDVVVFTAMISGYLH-NGLYIDSLEMFRWLVK 434
Query: 244 GNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLEC 303
++PN T S+L L G +LH IK G + ++I+MYA+ GR+
Sbjct: 435 VKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNL 494
Query: 304 ARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGAAC 362
A + F+ L ++ +VS +++ + N ++ +GI + + LS A
Sbjct: 495 AYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACAN 554
Query: 363 IGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSI 422
+ + G+ IH ++K +++ + LI MY+KCGN +AA+ VF M ++N+++W SI
Sbjct: 555 LPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSI 614
Query: 423 ISGFAKHGYATKALELFYEMLE-TGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCH 481
I+ HG +L LF+EM+E +G++P+ +T++ ++S+C HVG +DEG + F SM +
Sbjct: 615 IAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDY 674
Query: 482 GVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHA 541
G+ P+ EHYAC+VD+ GR+G L+EA E + SMP DA VW +LLG+CR+H N EL E A
Sbjct: 675 GIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVA 734
Query: 542 AKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHK 601
+ +++ +P + Y+L+SN +A W V +R MK++++ K GYSWIE+ + H
Sbjct: 735 SSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHL 794
Query: 602 FHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTDFVLH 640
F GD +HP++ IY L+ L +++ GY+P LH
Sbjct: 795 FVSGDVNHPESSHIYSLLNSLLGELRLEGYIPQPYLPLH 833
Score = 199 bits (505), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 132/528 (25%), Positives = 258/528 (48%), Gaps = 9/528 (1%)
Query: 10 WCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVL 69
W S++S F N + ++AL + ML G P+ F ++AC F + +V
Sbjct: 106 WNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVS 165
Query: 70 KTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDS 129
G D + V LI +++ G I+ ++F+++ +++ V WN+M+ +A+ G +
Sbjct: 166 SLG-MDCNEFVASSLIKAYLE-YGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSV 223
Query: 130 IDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDM 189
I F M + +P+ T L+ CA L+ +G QLH V+ SG+ + + SL+ M
Sbjct: 224 IKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSM 283
Query: 190 YAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPN 249
Y+KC G D+ ++F M + V+W +I+GYV+ SG +E++ F +M+ V P+
Sbjct: 284 YSKC---GRFDDASKLFRMMSRADTVTWNCMISGYVQ-SGLMEESLTFFYEMISSGVLPD 339
Query: 250 GFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFD 309
TFSS+L + + + + +Q+H ++ +S + ++LI+ Y + + A+ F
Sbjct: 340 AITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFS 399
Query: 310 LLFEKSLVSCETIVDVIVRD-LNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGK 368
+V ++ + + L D I T +L + +
Sbjct: 400 QCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKL 459
Query: 369 GEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAK 428
G ++H ++K GF+ +I A+I MY+KCG A ++F + R++++W S+I+ A+
Sbjct: 460 GRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQ 519
Query: 429 HGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVE 488
+ A+++F +M +G+ + V+ A LSAC+++ G K + H + V
Sbjct: 520 SDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFG-KAIHGFMIKHSLASDVY 578
Query: 489 HYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTE 536
+ ++D+ + G L A+ +M + + + W S++ +C HG +
Sbjct: 579 SESTLIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAACGNHGKLK 625
Score = 157 bits (397), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 183/364 (50%), Gaps = 19/364 (5%)
Query: 143 PDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDS 202
P R +L L AC+ LL GKQ+H+++I + ++ D ++ MYA C GS D
Sbjct: 35 PRRLSLL--LQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMC---GSFSDC 89
Query: 203 RRVFNSMP--EHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKAC 260
++F + ++ W ++I+ +VR +G +A+ + ML V+P+ TF ++KAC
Sbjct: 90 GKMFYRLDLRRSSIRPWNSIISSFVR-NGLLNQALAFYFKMLCFGVSPDVSTFPCLVKAC 148
Query: 261 ANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCE 320
L +F + L LG+ VA+SLI Y G+++ K FD + +K V
Sbjct: 149 VALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWN 208
Query: 321 TIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKS 379
+++ + D + I + T+ C+LS A I G Q+H LVV S
Sbjct: 209 VMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVS 268
Query: 380 GFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELF 439
G + SI N+L+SMYSKCG + A ++F M + +TW +ISG+ + G ++L F
Sbjct: 269 GVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFF 328
Query: 440 YEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGR 499
YEM+ +GV P+ +T+ ++L + S F ++ +C + + ++ +D+
Sbjct: 329 YEMISSGVLPDAITFSSLLPSVS----------KFENLEYCKQIHCYIMRHSISLDIFLT 378
Query: 500 SGLL 503
S L+
Sbjct: 379 SALI 382
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 114/500 (22%), Positives = 223/500 (44%), Gaps = 33/500 (6%)
Query: 49 LRACSNSLYFSVGR-----VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFE 103
L+ACSN G+ ++ S+ Y D + + M+ CG ++F
Sbjct: 42 LQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERI------LGMYAM-CGSFSDCGKMFY 94
Query: 104 KMQER--NVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELL 161
++ R ++ WN +++ F + G ++ +F+ML G +PD T + AC L+
Sbjct: 95 RLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNF 154
Query: 162 SVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALI 221
L V G+ + V SL+ Y + G + ++F+ + + + V W ++
Sbjct: 155 KGIDFLSDTVSSLGMDCNEFVASSLIKAYLEY---GKIDVPSKLFDRVLQKDCVIWNVML 211
Query: 222 AGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGL 281
GY + G ++ F M ++PN TF VL CA+ G QLH + G+
Sbjct: 212 NGYAK-CGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGV 270
Query: 282 SAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETE 341
+ NSL++MY++ GR + A K F ++ V+ ++ V+ +E+L E
Sbjct: 271 DFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYE 330
Query: 342 H-TTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGN 400
++G+ + T++ LL + + +QIH +++ ++ + +ALI Y KC
Sbjct: 331 MISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRG 390
Query: 401 KEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSA 460
A +F+ +V+ +T++ISG+ +G +LE+F +++ + PN++T +++L
Sbjct: 391 VSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPV 450
Query: 461 CSHVGLIDEGWKHFNSMRHCHGVV------PRVEHYACMVDVLGRSGLLSEAIEFINSMP 514
+ + G R HG + R ++D+ + G ++ A E +
Sbjct: 451 IGILLALKLG-------RELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLS 503
Query: 515 LDADAMVWRSLLGSCRVHGN 534
D + W S++ C N
Sbjct: 504 -KRDIVSWNSMITRCAQSDN 522
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 85/154 (55%), Gaps = 3/154 (1%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR 62
SKRD+VSW SM++ A + A+ F M G + +AAL AC+N S G+
Sbjct: 503 SKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGK 562
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
+ G ++K S V LIDM+ K CG++++A VF+ M+E+N+V+WN ++
Sbjct: 563 AIHGFMIKHS-LASDVYSESTLIDMYAK-CGNLKAAMNVFKTMKEKNIVSWNSIIAACGN 620
Query: 123 MGYPEDSIDLFFRML-LSGYTPDRFTLTSALTAC 155
G +DS+ LF M+ SG PD+ T +++C
Sbjct: 621 HGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSC 654
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 395 bits (1015), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/547 (38%), Positives = 318/547 (58%), Gaps = 26/547 (4%)
Query: 191 AKCAVDG---SLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVA 247
AKCA G S+ + +F + + + +I GYV E EA+ + +M+Q
Sbjct: 71 AKCAHSGWENSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFE-EALCFYNEMMQRGNE 129
Query: 248 PNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKC 307
P+ FT+ +LKAC L G+Q+H Q KLGL A V NSLINMY R G +E +
Sbjct: 130 PDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAV 189
Query: 308 FDLLFEKSLVSCETIVD------------VIVRDLNSDETLNHETEHTTGIGACSFTYAC 355
F+ L K+ S ++V ++ R + S+ L E G S AC
Sbjct: 190 FEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEES-----GMVSALLAC 244
Query: 356 LLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRN 415
+GA +G IH ++++ E N+ + +L+ MY KCG + AL +F M RN
Sbjct: 245 ANTGALNLGM-----SIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRN 299
Query: 416 VITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFN 475
+T++++ISG A HG AL +F +M++ G++P+ V Y++VL+ACSH GL+ EG + F
Sbjct: 300 NLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFA 359
Query: 476 SMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNT 535
M V P EHY C+VD+LGR+GLL EA+E I S+P++ + ++WR+ L CRV N
Sbjct: 360 EMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNI 419
Query: 536 ELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEV 595
ELG+ AA+ +L+ H+P Y+L+SNLY+ + W DVA R + K + + G+S +E+
Sbjct: 420 ELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVEL 479
Query: 596 ENQVHKFHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTDFVLHDVEDEQKEQYLFQHS 655
+ + H+F D SHP+ ++IY L ++ ++K GY P+ +L +V++E+K++ L HS
Sbjct: 480 KGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGYSPDLTQILLNVDEEEKKERLKGHS 539
Query: 656 EKIAVAFALISIPNPKPIRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGT 715
+K+A+AF L+ P I+I +NLR+C DCHT K IS + R IVVRD NRFH K GT
Sbjct: 540 QKVAIAFGLLYTPPGSIIKIARNLRMCSDCHTYTKKISMIYEREIVVRDRNRFHLFKGGT 599
Query: 716 CSCNDYW 722
CSC DYW
Sbjct: 600 CSCKDYW 606
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 159/298 (53%), Gaps = 14/298 (4%)
Query: 12 SMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVLKT 71
+M+ + N EAL + +M++ G P+ + + L+AC+ G+ + G V K
Sbjct: 102 TMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKL 161
Query: 72 GYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSID 131
G ++ V V LI+M+ + CG++E + VFEK++ + +W+ M++ A MG + +
Sbjct: 162 G-LEADVFVQNSLINMYGR-CGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECL- 218
Query: 132 LFFRMLLS--GYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDM 189
L FR + S + + SAL ACA L++G +H +++R+ L++ V SLVDM
Sbjct: 219 LLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDM 278
Query: 190 YAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPN 249
Y KC G L + +F M + N ++++A+I+G G+ + A+R+F M++ + P+
Sbjct: 279 YVKC---GCLDKALHIFQKMEKRNNLTYSAMISGLAL-HGEGESALRMFSKMIKEGLEPD 334
Query: 250 GFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANS---LINMYARSGRLECA 304
+ SVL AC++ G ++ ++ +K G V A L+++ R+G LE A
Sbjct: 335 HVVYVSVLNACSHSGLVKEGRRVFAEMLKEG--KVEPTAEHYGCLVDLLGRAGLLEEA 390
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 150/332 (45%), Gaps = 10/332 (3%)
Query: 98 AHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAE 157
A +F + + +N M+ + + E+++ + M+ G PD FT L AC
Sbjct: 85 AASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTR 144
Query: 158 LELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSW 217
L+ + GKQ+H V + GL D+ V SL++MY +C G + S VF + SW
Sbjct: 145 LKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRC---GEMELSSAVFEKLESKTAASW 201
Query: 218 TALIAGYVRGSGQEQEAMRLFCDML-QGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQT 276
+++++ G G E + LF M + N+ S L ACAN G +H
Sbjct: 202 SSMVSARA-GMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFL 260
Query: 277 IKLGLSAVN-CVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDET 335
++ +S +N V SL++MY + G L+ A F + +++ ++ ++ + +
Sbjct: 261 LR-NISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESA 319
Query: 336 LNHETEHTT-GIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSG-FETNLSINNALIS 393
L ++ G+ Y +L+ + G + +G ++ A ++K G E L+
Sbjct: 320 LRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVD 379
Query: 394 MYSKCGNKEAALQVFNDMG-DRNVITWTSIIS 424
+ + G E AL+ + ++N + W + +S
Sbjct: 380 LLGRAGLLEEALETIQSIPIEKNDVIWRTFLS 411
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 112/218 (51%), Gaps = 10/218 (4%)
Query: 9 SWCSMMSCFANNSMEHEALVTFLDML-EHGFYPNEYCFTAALRACSNSLYFSVGRVVFGS 67
SW SM+S A M E L+ F M E E +AL AC+N+ ++G + G
Sbjct: 200 SWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGF 259
Query: 68 VLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPE 127
+L+ + ++ V L+DM+VK CG ++ A +F+KM++RN +T++ M++ A G E
Sbjct: 260 LLRN-ISELNIIVQTSLVDMYVK-CGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGE 317
Query: 128 DSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLC--VGCS 185
++ +F +M+ G PD S L AC+ L+ G+++ + +++ G GC
Sbjct: 318 SALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGC- 376
Query: 186 LVDMYAKCAVDGSLVDSRRVFNSMP-EHNVVSWTALIA 222
LVD+ + G L ++ S+P E N V W ++
Sbjct: 377 LVDLLGRA---GLLEEALETIQSIPIEKNDVIWRTFLS 411
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 395 bits (1015), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/487 (40%), Positives = 306/487 (62%), Gaps = 6/487 (1%)
Query: 241 MLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGR 300
ML NV+P+ +TF+SV+K+CA+L G+ +H + G V +L+ Y++ G
Sbjct: 98 MLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGD 157
Query: 301 LECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETE-HTTGIGACSFTYACLLSG 359
+E AR+ FD + EKS+V+ ++V ++ +DE + + +G S T+ LLS
Sbjct: 158 MEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSA 217
Query: 360 AACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITW 419
A G + G +H ++ G + N+ + ALI++YS+CG+ A +VF+ M + NV W
Sbjct: 218 CAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAW 277
Query: 420 TSIISGFAKHGYATKALELFYEMLET-GVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMR 478
T++IS + HGY +A+ELF +M + G PN+VT++AVLSAC+H GL++EG + M
Sbjct: 278 TAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMT 337
Query: 479 HCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAM---VWRSLLGSCRVHGNT 535
+ ++P VEH+ CMVD+LGR+G L EA +FI+ + A +W ++LG+C++H N
Sbjct: 338 KSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNY 397
Query: 536 ELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEV 595
+LG AK ++ EP +P +++LSN+YA + +V+ IR M + + K+ GYS IEV
Sbjct: 398 DLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEV 457
Query: 596 ENQVHKFHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTDFVLHDVEDEQKEQYLFQHS 655
EN+ + F +GD SH + +IY L+ L S+ K++GY P ++ V+H VE+E+KE L HS
Sbjct: 458 ENKTYMFSMGDESHQETGEIYRYLETLISRCKEIGYAPVSEEVMHQVEEEEKEFALRYHS 517
Query: 656 EKIAVAFALISIPNPKPIRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGT 715
EK+AVAF L+ + I I KNLR+C DCH+A KYIS V+ R I VRD RFHH ++G+
Sbjct: 518 EKLAVAFGLLKTVDV-AITIVKNLRICEDCHSAFKYISIVSNRQITVRDKLRFHHFQNGS 576
Query: 716 CSCNDYW 722
CSC DYW
Sbjct: 577 CSCLDYW 583
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 158/284 (55%), Gaps = 18/284 (6%)
Query: 30 FLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVLKTGY-FDSHVSVGCELIDMF 88
+ ML P+ Y FT+ +++C++ +G+ V + +G+ D++V + F
Sbjct: 95 YRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAA---LVTF 151
Query: 89 VKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTL 148
CGD+E A +VF++M E+++V WN +++ F Q G +++I +F++M SG+ PD T
Sbjct: 152 YSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATF 211
Query: 149 TSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNS 208
S L+ACA+ +S+G +H ++I GL L++ +G +L+++Y++C G + +R VF+
Sbjct: 212 VSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRC---GDVGKAREVFDK 268
Query: 209 MPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQG-NVAPNGFTFSSVLKACANLPDFG 267
M E NV +WTA+I+ Y G Q+A+ LF M PN TF +VL ACA+
Sbjct: 269 MKETNVAAWTAMISAY-GTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVE 327
Query: 268 FGEQLHSQTIK-----LGLSAVNCVANSLINMYARSGRLECARK 306
G ++ + K G+ C +++M R+G L+ A K
Sbjct: 328 EGRSVYKRMTKSYRLIPGVEHHVC----MVDMLGRAGFLDEAYK 367
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 145/287 (50%), Gaps = 6/287 (2%)
Query: 95 IESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTA 154
I H +F + + +N ++ +++ P + + RML S +P +T TS + +
Sbjct: 57 IAYTHLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKS 116
Query: 155 CAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNV 214
CA+L L +GK +H + SG LD V +LV Y+KC G + +R+VF+ MPE ++
Sbjct: 117 CADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKC---GDMEGARQVFDRMPEKSI 173
Query: 215 VSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHS 274
V+W +L++G+ + +G EA+++F M + P+ TF S+L ACA G +H
Sbjct: 174 VAWNSLVSGFEQ-NGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQ 232
Query: 275 QTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDE 334
I GL + +LIN+Y+R G + AR+ FD + E ++ + ++ +
Sbjct: 233 YIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQ 292
Query: 335 T--LNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKS 379
L ++ E G + T+ +LS A G + +G ++ + KS
Sbjct: 293 AVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKS 339
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 96/172 (55%), Gaps = 3/172 (1%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
++ +V+W S++S F N + EA+ F M E GF P+ F + L AC+ + S+G
Sbjct: 170 EKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSW 229
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
V ++ G D +V +G LI+++ + CGD+ A VF+KM+E NV W M++ +
Sbjct: 230 VHQYIISEG-LDLNVKLGTALINLYSR-CGDVGKAREVFDKMKETNVAAWTAMISAYGTH 287
Query: 124 GYPEDSIDLFFRMLLS-GYTPDRFTLTSALTACAELELLSVGKQLHSWVIRS 174
GY + +++LF +M G P+ T + L+ACA L+ G+ ++ + +S
Sbjct: 288 GYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKS 339
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 394 bits (1012), Expect = e-109, Method: Compositional matrix adjust.
Identities = 249/708 (35%), Positives = 388/708 (54%), Gaps = 46/708 (6%)
Query: 41 NEYCFTAALRACSNSLYFSVGRVVFGSVLKTGY-FDSHVSVGCELIDMFVKGCGDIESAH 99
++ + A +AC+ G + +L Y + +V + LI+M+ K CG+I A
Sbjct: 58 SQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAK-CGNILYAR 116
Query: 100 RVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELE 159
+VF+ M ERNVV+W ++T + Q G ++ LF ML S P+ FTL+S LT+C
Sbjct: 117 QVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSML-SHCFPNEFTLSSVLTSCR--- 172
Query: 160 LLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTA 219
GKQ+H ++ GL + V +++ MY +C + ++ VF ++ N+V+W +
Sbjct: 173 -YEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNS 231
Query: 220 LIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANL---PDFGFGE------ 270
+IA + + ++A+ +F M V GF +++L C++L D E
Sbjct: 232 MIAAF-QCCNLGKKAIGVFMRMHSDGV---GFDRATLLNICSSLYKSSDLVPNEVSKCCL 287
Query: 271 QLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKS----LVSCETIVDVI 326
QLHS T+K GL VA +LI +Y S LE C+ L E S +V+ I+
Sbjct: 288 QLHSLTVKSGLVTQTEVATALIKVY--SEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAF 345
Query: 327 V-----RDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGF 381
R ++ L E + +T++ +L A + T IHA V+K GF
Sbjct: 346 AVYDPERAIHLFGQLRQEK-----LSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGF 400
Query: 382 ETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYE 441
+ +NN+LI Y+KCG+ + ++VF+DM R+V++W S++ ++ HG L +F +
Sbjct: 401 LADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQK 460
Query: 442 MLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSG 501
M + P+ T+IA+LSACSH G ++EG + F SM +P++ HYAC++D+L R+
Sbjct: 461 M---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAE 517
Query: 502 LLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILER-EPHDPATYILLS 560
+EA E I MP+D DA+VW +LLGSCR HGNT LG+ AA + E EP + +YI +S
Sbjct: 518 RFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMS 577
Query: 561 NLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELD 620
N+Y E + + K M+ ++ KE SW E+ N+VH+F G P + +Y EL
Sbjct: 578 NIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYRELK 637
Query: 621 ELASKIKKLGYVPNTDFV-LHDVEDEQKEQYLFQHSEKIAVAFALI-----SIPNPKPIR 674
L S +K++GYVP ++EQ+E L HSEK+A+AFA++ S I+
Sbjct: 638 RLISWLKEMGYVPEMRSASQDIEDEEQEEDNLLHHSEKLALAFAVMEGRKSSDCGVNLIQ 697
Query: 675 IFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGTCSCNDYW 722
I KN R+C DCH +K SK+ G+ I++RD+NRFHH KD +CSCNDYW
Sbjct: 698 IMKNTRICIDCHNFMKLASKLLGKEILMRDSNRFHHFKDSSCSCNDYW 745
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 138/480 (28%), Positives = 230/480 (47%), Gaps = 27/480 (5%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
+R++VSW ++++ + E E F ML H F PNE+ ++ L +C + G+
Sbjct: 124 ERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCF-PNEFTLSSVLTSCR----YEPGKQ 178
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHR---VFEKMQERNVVTWNLMMTRF 120
V G LK G S + V +I M+ + C D +A+ VFE ++ +N+VTWN M+ F
Sbjct: 179 VHGLALKLGLHCS-IYVANAVISMYGR-CHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAF 236
Query: 121 AQMGYPEDSIDLFFRMLLSGYTPDRFTLT---SALTACAELELLSVGK---QLHSWVIRS 174
+ +I +F RM G DR TL S+L ++L V K QLHS ++S
Sbjct: 237 QCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKS 296
Query: 175 GLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPE-HNVVSWTALIAGYVRGSGQEQE 233
GL V +L+ +Y++ D D ++F M ++V+W +I + +
Sbjct: 297 GLVTQTEVATALIKVYSEMLED--YTDCYKLFMEMSHCRDIVAWNGIITAF--AVYDPER 352
Query: 234 AMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLIN 293
A+ LF + Q ++P+ +TFSSVLKACA L +H+Q IK G A + NSLI+
Sbjct: 353 AIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIH 412
Query: 294 MYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTY 353
YA+ G L+ + FD + + +VS +++ D L I S T+
Sbjct: 413 AYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSIL--PVFQKMDINPDSATF 470
Query: 354 ACLLSGAACIGTIGKGEQI-HALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMG 412
LLS + G + +G +I ++ K L+ +I M S+ A +V M
Sbjct: 471 IALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMP 530
Query: 413 -DRNVITWTSIISGFAKHGYATKALELFYEMLETGVKP-NDVTYIAVLSACSHVGLIDEG 470
D + + W +++ KHG T+ +L + L+ V+P N ++YI + + + G +E
Sbjct: 531 MDPDAVVWIALLGSCRKHG-NTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEA 589
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 393 bits (1009), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/611 (35%), Positives = 338/611 (55%), Gaps = 39/611 (6%)
Query: 146 FTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRV 205
+ S L C++ E L KQ+H+ ++++GL D + L ++ V
Sbjct: 15 YETMSCLQRCSKQEEL---KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIV 71
Query: 206 FNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPD 265
F+ + W +I G+ S + + ++ L+ ML + N +TF S+LKAC+NL
Sbjct: 72 FDGFDRPDTFLWNLMIRGF-SCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSA 130
Query: 266 FGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDV 325
F Q+H+Q KLG NSLIN YA +G + A FD + E VS +++
Sbjct: 131 FEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKG 190
Query: 326 IVR--------------------------------DLNSDE-TLNHETEHTTGIGACSFT 352
V+ D+N + L HE +++ + + +
Sbjct: 191 YVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNS-DVEPDNVS 249
Query: 353 YACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMG 412
A LS A +G + +G+ IH+ + K+ + + LI MY+KCG E AL+VF ++
Sbjct: 250 LANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIK 309
Query: 413 DRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWK 472
++V WT++ISG+A HG+ +A+ F EM + G+KPN +T+ AVL+ACS+ GL++EG
Sbjct: 310 KKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKL 369
Query: 473 HFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVH 532
F SM + + P +EHY C+VD+LGR+GLL EA FI MPL +A++W +LL +CR+H
Sbjct: 370 IFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIH 429
Query: 533 GNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSW 592
N ELGE ++++ +P+ Y+ +N++A +++W A R+ MK++ + K G S
Sbjct: 430 KNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCST 489
Query: 593 IEVENQVHKFHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTDFVLHD-VEDEQKEQYL 651
I +E H+F GD SHP+ +KI + + K+++ GYVP + +L D V+D+++E +
Sbjct: 490 ISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIV 549
Query: 652 FQHSEKIAVAFALISIPNPKPIRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHI 711
QHSEK+A+ + LI IRI KNLRVC DCH K ISK+ R IV+RD RFHH
Sbjct: 550 HQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHF 609
Query: 712 KDGTCSCNDYW 722
+DG CSC DYW
Sbjct: 610 RDGKCSCGDYW 620
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 165/338 (48%), Gaps = 44/338 (13%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
+ D W M+ F+ + +L+ + ML N Y F + L+ACSN F
Sbjct: 77 RPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQ 136
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMF---------------------------VKG---CG 93
+ + K GY + +V LI+ + +KG G
Sbjct: 137 IHAQITKLGYENDVYAVN-SLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAG 195
Query: 94 DIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALT 153
++ A +F KM E+N ++W M++ + Q ++++ LF M S PD +L +AL+
Sbjct: 196 KMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALS 255
Query: 154 ACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHN 213
ACA+L L GK +HS++ ++ + +D +GC L+DMYAKC G + ++ VF ++ + +
Sbjct: 256 ACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKC---GEMEEALEVFKNIKKKS 312
Query: 214 VVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACA--NLPDFG---F 268
V +WTALI+GY G +EA+ F +M + + PN TF++VL AC+ L + G F
Sbjct: 313 VQAWTALISGYAY-HGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIF 371
Query: 269 GEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARK 306
+K + C+ +++ R+G L+ A++
Sbjct: 372 YSMERDYNLKPTIEHYGCI----VDLLGRAGLLDEAKR 405
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/443 (23%), Positives = 188/443 (42%), Gaps = 44/443 (9%)
Query: 34 LEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCG 93
LEH Y C L+ CS + + +LKTG ++ L
Sbjct: 10 LEHNLYETMSC----LQRCSKQEEL---KQIHARMLKTGLMQDSYAITKFLSFCISSTSS 62
Query: 94 D-IESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSAL 152
D + A VF+ + WNLM+ F+ PE S+ L+ RML S + +T S L
Sbjct: 63 DFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLL 122
Query: 153 TACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYA--------------------- 191
AC+ L Q+H+ + + G D+ SL++ YA
Sbjct: 123 KACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDV 182
Query: 192 ------KCAVDGSLVD-SRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQG 244
K V +D + +F M E N +SWT +I+GYV+ +EA++LF +M
Sbjct: 183 SWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQAD-MNKEALQLFHEMQNS 241
Query: 245 NVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECA 304
+V P+ + ++ L ACA L G+ +HS K + + + LI+MYA+ G +E A
Sbjct: 242 DVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEA 301
Query: 305 RKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETE-HTTGIGACSFTYACLLSGAACI 363
+ F + +KS+ + ++ + E ++ E GI T+ +L+ +
Sbjct: 302 LEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYT 361
Query: 364 GTIGKGEQI-HALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDR-NVITWTS 421
G + +G+ I +++ + + ++ + + G + A + +M + N + W +
Sbjct: 362 GLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGA 421
Query: 422 IISGFAKHGYATKALELFYEMLE 444
++ H K +EL E+ E
Sbjct: 422 LLKACRIH----KNIELGEEIGE 440
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 112/225 (49%), Gaps = 11/225 (4%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR 62
++++ +SW +M+S + M EAL F +M P+ AL AC+ G+
Sbjct: 208 AEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGK 267
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
+ + KT V +GC LIDM+ K CG++E A VF+ +++++V W +++ +A
Sbjct: 268 WIHSYLNKTRIRMDSV-LGCVLIDMYAK-CGEMEEALEVFKNIKKKSVQAWTALISGYAY 325
Query: 123 MGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCV 182
G+ ++I F M G P+ T T+ LTAC+ L+ GK L + + L +
Sbjct: 326 HGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGK-LIFYSMERDYNLKPTI 384
Query: 183 ---GCSLVDMYAKCAVDGSLVDSRRVFNSMP-EHNVVSWTALIAG 223
GC +VD+ + G L +++R MP + N V W AL+
Sbjct: 385 EHYGC-IVDLLGRA---GLLDEAKRFIQEMPLKPNAVIWGALLKA 425
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 392 bits (1007), Expect = e-109, Method: Compositional matrix adjust.
Identities = 228/651 (35%), Positives = 339/651 (52%), Gaps = 81/651 (12%)
Query: 146 FTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRV 205
F L L ++ L + +HS +I L + +G L+ YA + +R+V
Sbjct: 43 FLLGQVLDTYPDIRTL---RTVHSRIILEDLRCNSSLGVKLMRAYASLK---DVASARKV 96
Query: 206 FNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPD 265
F+ +PE NV+ +I YV +G E +++F M NV P+ +TF VLKAC+
Sbjct: 97 FDEIPERNVIIINVMIRSYV-NNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGT 155
Query: 266 FGFGEQLHSQTIKLGLSAVNCVA-------------------------------NSLINM 294
G ++H K+GLS+ V NSL+
Sbjct: 156 IVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVG 215
Query: 295 YARSGR----LECARK------------------------------CFDLLFE---KSLV 317
YA++ R LE R+ D+ F+ KSLV
Sbjct: 216 YAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLV 275
Query: 318 SCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALV 376
S ++ V +++ E + + G + + +L + G++IH +
Sbjct: 276 SWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYI 335
Query: 377 VKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKAL 436
+ NL + NALI MY+KCG E A VF +M R+V++WT++IS + G A+
Sbjct: 336 ERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAV 395
Query: 437 ELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDV 496
LF ++ ++G+ P+ + ++ L+ACSH GL++EG F M + + PR+EH ACMVD+
Sbjct: 396 ALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDL 455
Query: 497 LGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATY 556
LGR+G + EA FI M ++ + VW +LLG+CRVH +T++G AA + + P Y
Sbjct: 456 LGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYY 515
Query: 557 ILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIY 616
+LLSN+YA RW +V IR MK K + K G S +EV +H F VGD SHPQ+ +IY
Sbjct: 516 VLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIY 575
Query: 617 DELDELASKIKKLGYVPNTDFVLHDVEDEQKEQYLFQHSEKIAVAFALISIPNPK----- 671
ELD L K+K+LGYVP+++ LHDVE+E KE +L HSEK+A+ FAL++ +
Sbjct: 576 RELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNN 635
Query: 672 PIRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGTCSCNDYW 722
IRI KNLR+CGDCH A K IS++T R I++RD NRFH + G CSC DYW
Sbjct: 636 TIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 132/260 (50%), Gaps = 39/260 (15%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR 62
S+RD+VSW S++ +A N +AL +M + + L A SN+ +V
Sbjct: 202 SRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV-- 259
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
M+VK +F KM ++++V+WN+M+ + +
Sbjct: 260 ------------------------MYVKD---------MFFKMGKKSLVSWNVMIGVYMK 286
Query: 123 MGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCV 182
P ++++L+ RM G+ PD ++TS L AC + LS+GK++H ++ R L +L +
Sbjct: 287 NAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLL 346
Query: 183 GCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDML 242
+L+DMYAKC G L +R VF +M +VVSWTA+I+ Y SG+ +A+ LF +
Sbjct: 347 ENALIDMYAKC---GCLEKARDVFENMKSRDVVSWTAMISAY-GFSGRGCDAVALFSKLQ 402
Query: 243 QGNVAPNGFTFSSVLKACAN 262
+ P+ F + L AC++
Sbjct: 403 DSGLVPDSIAFVTTLAACSH 422
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 134/317 (42%), Gaps = 48/317 (15%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
K+ LVSW M+ + N+M EA+ + M GF P+ T+ L AC ++ S+G+
Sbjct: 271 KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKK 330
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
+ G + + ++ + LIDM+ K CG +E A VFE M+ R+VV+W M++ +
Sbjct: 331 IHGYIERKKLI-PNLLLENALIDMYAK-CGCLEKARDVFENMKSRDVVSWTAMISAYGFS 388
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVG 183
G D++ LF ++ SG PD + L AC+ LL G
Sbjct: 389 GRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEG------------------- 429
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVS----WTALIAGYVRGSGQEQEAMRLFC 239
R F M +H ++ A + + +G+ +EA R
Sbjct: 430 -------------------RSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQ 470
Query: 240 DMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSG 299
DM ++ PN + ++L AC D G + +L L N+YA++G
Sbjct: 471 DM---SMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYV-LLSNIYAKAG 526
Query: 300 RLECARKCFDLLFEKSL 316
R E +++ K L
Sbjct: 527 RWEEVTNIRNIMKSKGL 543
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 392 bits (1007), Expect = e-109, Method: Compositional matrix adjust.
Identities = 226/652 (34%), Positives = 370/652 (56%), Gaps = 16/652 (2%)
Query: 5 RDLVSWCSMMSCFANN---SMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVG 61
+D+VSW S+++ ++ N S + + F +M PN Y +A S+ +VG
Sbjct: 78 KDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVG 137
Query: 62 RVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFA 121
R V+K F + V L+ M+ K G +E +VF M ERN TW+ M++ +A
Sbjct: 138 RQAHALVVKMSSFGD-IYVDTSLVGMYCKA-GLVEDGLKVFAYMPERNTYTWSTMVSGYA 195
Query: 122 QMGYPEDSI---DLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLAL 178
G E++I +LF R G D + T+ L++ A + +G+Q+H I++GL
Sbjct: 196 TRGRVEEAIKVFNLFLREKEEGSDSD-YVFTAVLSSLAATIYVGLGRQIHCITIKNGLLG 254
Query: 179 DLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLF 238
+ + +LV MY+KC SL ++ ++F+S + N ++W+A++ GY + +G+ EA++LF
Sbjct: 255 FVALSNALVTMYSKCE---SLNEACKMFDSSGDRNSITWSAMVTGYSQ-NGESLEAVKLF 310
Query: 239 CDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARS 298
M + P+ +T VL AC+++ G+QLHS +KLG +L++MYA++
Sbjct: 311 SRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKA 370
Query: 299 GRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLL 357
G L ARK FD L E+ + +++ V++ +++E L + T GI T A +L
Sbjct: 371 GCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVL 430
Query: 358 SGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVI 417
+ + T+ G+Q+H +K GF + I +AL +MYSKCG+ E VF +++V+
Sbjct: 431 KACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVV 490
Query: 418 TWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSM 477
+W ++ISG + +G +ALELF EML G++P+DVT++ ++SACSH G ++ GW +FN M
Sbjct: 491 SWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMM 550
Query: 478 RHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTEL 537
G+ P+V+HYACMVD+L R+G L EA EFI S +D +WR LL +C+ HG EL
Sbjct: 551 SDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCEL 610
Query: 538 GEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVEN 597
G +A + ++ + +TY+ LS +Y R DV + K M+ + KE G SWIE++N
Sbjct: 611 GVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKN 670
Query: 598 QVHKFHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTDFVLHDVEDEQKEQ 649
Q H F VGDT HP ++ D + ++ ++ + G+V D VE+E+ Q
Sbjct: 671 QYHVFVVGDTMHPMIEETKDLVCLVSRQMIEEGFVTVLDSSF--VEEEEGTQ 720
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 145/507 (28%), Positives = 260/507 (51%), Gaps = 21/507 (4%)
Query: 61 GRVVFGSVLKTGYFD--SHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMT 118
GR V G +++TG H +V L++ + K CG + AH +F + ++VV+WN ++T
Sbjct: 33 GRAVHGQIIRTGASTCIQHANV---LVNFYAK-CGKLAKAHSIFNAIICKDVVSWNSLIT 88
Query: 119 RFAQMGYPEDS---IDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSG 175
++Q G S + LF M P+ +TL A + L+ +VG+Q H+ V++
Sbjct: 89 GYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMS 148
Query: 176 LALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAM 235
D+ V SLV MY K G + D +VF MPE N +W+ +++GY G+ +EA+
Sbjct: 149 SFGDIYVDTSLVGMYCKA---GLVEDGLKVFAYMPERNTYTWSTMVSGYAT-RGRVEEAI 204
Query: 236 RLFCDMLQGNV--APNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLIN 293
++F L+ + + + F++VL + A G G Q+H TIK GL ++N+L+
Sbjct: 205 KVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVT 264
Query: 294 MYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFT 352
MY++ L A K FD +++ ++ +V ++ S E + + GI +T
Sbjct: 265 MYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYT 324
Query: 353 YACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMG 412
+L+ + I + +G+Q+H+ ++K GFE +L AL+ MY+K G A + F+ +
Sbjct: 325 IVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQ 384
Query: 413 DRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWK 472
+R+V WTS+ISG+ ++ +AL L+ M G+ PND T +VL ACS + ++ G +
Sbjct: 385 ERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQ 444
Query: 473 -HFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRV 531
H ++++H G+ V + + + + G L + P + D + W +++
Sbjct: 445 VHGHTIKHGFGL--EVPIGSALSTMYSKCGSLEDGNLVFRRTP-NKDVVSWNAMISGLSH 501
Query: 532 HGN-TELGEHAAKMILEREPHDPATYI 557
+G E E +M+ E D T++
Sbjct: 502 NGQGDEALELFEEMLAEGMEPDDVTFV 528
Score = 194 bits (492), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 136/482 (28%), Positives = 240/482 (49%), Gaps = 17/482 (3%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVT---FLDMLEHGFYPNEYCFTAALRACSNSLYFSV 60
+R+ +W +M+S +A EA+ FL E G ++Y FTA L + + ++Y +
Sbjct: 181 ERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEG-SDSDYVFTAVLSSLAATIYVGL 239
Query: 61 GRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRF 120
GR + +K G V++ L+ M+ K C + A ++F+ +RN +TW+ M+T +
Sbjct: 240 GRQIHCITIKNGLL-GFVALSNALVTMYSK-CESLNEACKMFDSSGDRNSITWSAMVTGY 297
Query: 121 AQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDL 180
+Q G +++ LF RM +G P +T+ L AC+++ L GKQLHS++++ G L
Sbjct: 298 SQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHL 357
Query: 181 CVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCD 240
+LVDMYAK G L D+R+ F+ + E +V WT+LI+GYV+ S E EA+ L+
Sbjct: 358 FATTALVDMYAKA---GCLADARKGFDCLQERDVALWTSLISGYVQNSDNE-EALILYRR 413
Query: 241 MLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGR 300
M + PN T +SVLKAC++L G+Q+H TIK G + ++L MY++ G
Sbjct: 414 MKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGS 473
Query: 301 LECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSG 359
LE F K +VS ++ + + DE L E G+ T+ ++S
Sbjct: 474 LEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISA 533
Query: 360 AACIGTIGKGE-QIHALVVKSGFETNLSINNALISMYSKCGN-KEAALQVFNDMGDRNVI 417
+ G + +G + + + G + + ++ + S+ G KEA + + D +
Sbjct: 534 CSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLC 593
Query: 418 TWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYI---AVLSACSHVGLIDEGWKHF 474
W ++S HG + +++ G + + TY+ + +A + ++ WKH
Sbjct: 594 LWRILLSACKNHGKCELGVYAGEKLMALGSRESS-TYVQLSGIYTALGRMRDVERVWKHM 652
Query: 475 NS 476
+
Sbjct: 653 RA 654
Score = 189 bits (480), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 122/426 (28%), Positives = 219/426 (51%), Gaps = 28/426 (6%)
Query: 143 PDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDS 202
P TL LT ++ L G+ +H +IR+G + + LV+ YAKC G L +
Sbjct: 12 PHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKC---GKLAKA 68
Query: 203 RRVFNSMPEHNVVSWTALIAGYVRGSG--QEQEAMRLFCDMLQGNVAPNGFTFSSVLKAC 260
+FN++ +VVSW +LI GY + G M+LF +M ++ PN +T + + KA
Sbjct: 69 HSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAE 128
Query: 261 ANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCE 320
++L G Q H+ +K+ V SL+ MY ++G +E K F + E++ +
Sbjct: 129 SSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWS 188
Query: 321 TIVDVIVRDLNSDETLN------HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHA 374
T+V +E + E E + + + +LS A +G G QIH
Sbjct: 189 TMVSGYATRGRVEEAIKVFNLFLREKEEGSD---SDYVFTAVLSSLAATIYVGLGRQIHC 245
Query: 375 LVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATK 434
+ +K+G ++++NAL++MYSKC + A ++F+ GDRN ITW+++++G++++G + +
Sbjct: 246 ITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLE 305
Query: 435 ALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMV 494
A++LF M G+KP++ T + VL+ACS + ++EG K +S G + +V
Sbjct: 306 AVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEG-KQLHSFLLKLGFERHLFATTALV 364
Query: 495 DVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILERE----- 549
D+ ++G L++A + + + + D +W SL + G + ++ +IL R
Sbjct: 365 DMYAKAGCLADARKGFDCLQ-ERDVALWTSL-----ISGYVQNSDNEEALILYRRMKTAG 418
Query: 550 --PHDP 553
P+DP
Sbjct: 419 IIPNDP 424
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 100/210 (47%), Gaps = 21/210 (10%)
Query: 369 GEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAK 428
G +H ++++G T + N L++ Y+KCG A +FN + ++V++W S+I+G+++
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 429 HGYATKA---LELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVP 485
+G + + ++LF EM + PN T + A S + G R H +V
Sbjct: 93 NGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVG-------RQAHALVV 145
Query: 486 RVEHYA------CMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGE 539
++ + +V + ++GL+ + ++ MP + + W +++ G E
Sbjct: 146 KMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMP-ERNTYTWSTMVSGYATRGRVEEAI 204
Query: 540 HAAKMIL-EREPHDPATYI---LLSNLYAT 565
+ L E+E + Y+ +LS+L AT
Sbjct: 205 KVFNLFLREKEEGSDSDYVFTAVLSSLAAT 234
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 386 bits (991), Expect = e-107, Method: Compositional matrix adjust.
Identities = 224/654 (34%), Positives = 365/654 (55%), Gaps = 77/654 (11%)
Query: 45 FTAALRACSNSLYFSVG-RVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFE 103
F L +C S ++ R V SV+K+G F + + + LID + K CG +E +VF+
Sbjct: 22 FAKLLDSCIKSKLSAIYVRYVHASVIKSG-FSNEIFIQNRLIDAYSK-CGSLEDGRQVFD 79
Query: 104 KMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRM----------LLSGYTP-DR------- 145
KM +RN+ TWN ++T ++G+ +++ LF M ++SG+ DR
Sbjct: 80 KMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCY 139
Query: 146 -------------FTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAK 192
++ S L+AC+ L ++ G Q+HS + +S D+ +G +LVDMY+K
Sbjct: 140 FAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSK 199
Query: 193 CAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFT 252
C G++ D++RVF+ M + NVVSW +LI + + +G EA+ +F ML+ V P+ T
Sbjct: 200 C---GNVNDAQRVFDEMGDRNVVSWNSLITCFEQ-NGPAVEALDVFQMMLESRVEPDEVT 255
Query: 253 FSSVLKACANLPDFGFGEQLHSQTIKLG-LSAVNCVANSLINMYARSGRLECARKCFDLL 311
+SV+ ACA+L G+++H + +K L ++N+ ++MYA+ R++ AR FD +
Sbjct: 256 LASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSM 315
Query: 312 FEKSLVSCETIVD-----------------------VIVRDLNSDETLNHETEHTTGI-- 346
+++++ +++ V L + T N E E +
Sbjct: 316 PIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFC 375
Query: 347 -----GACS--FTYACLLSGAACIGTIGKGEQIHALVVKSGF------ETNLSINNALIS 393
C +++A +L A + + G Q H V+K GF E ++ + N+LI
Sbjct: 376 LLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLID 435
Query: 394 MYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVT 453
MY KCG E VF M +R+ ++W ++I GFA++GY +ALELF EMLE+G KP+ +T
Sbjct: 436 MYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHIT 495
Query: 454 YIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSM 513
I VLSAC H G ++EG +F+SM GV P +HY CMVD+LGR+G L EA I M
Sbjct: 496 MIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEM 555
Query: 514 PLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVA 573
P+ D+++W SLL +C+VH N LG++ A+ +LE EP + Y+LLSN+YA +W DV
Sbjct: 556 PMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVM 615
Query: 574 AIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELDELASKIK 627
+RK+M+++ + K+ G SWI+++ H F V D SHP+ ++I+ LD L ++++
Sbjct: 616 NVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMR 669
Score = 207 bits (526), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 156/522 (29%), Positives = 253/522 (48%), Gaps = 60/522 (11%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
+RD +W SM+S FA + EAL F M + GF NEY F + L ACS + G
Sbjct: 114 ERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQ 173
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
V + K+ + S V +G L+DM+ K CG++ A RVF++M +RNVV+WN ++T F Q
Sbjct: 174 VHSLIAKSPFL-SDVYIGSALVDMYSK-CGNVNDAQRVFDEMGDRNVVSWNSLITCFEQN 231
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSG-LALDLCV 182
G +++D+F ML S PD TL S ++ACA L + VG+++H V+++ L D+ +
Sbjct: 232 GPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIIL 291
Query: 183 GCSLVDMYAKC----------------------------AVDGSLVDSRRVFNSMPEHNV 214
+ VDMYAKC A+ S +R +F M E NV
Sbjct: 292 SNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNV 351
Query: 215 VSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHS 274
VSW ALIAGY + +G+ +EA+ LFC + + +V P ++F+++LKACA+L + G Q H
Sbjct: 352 VSWNALIAGYTQ-NGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHV 410
Query: 275 QTIKLGLSAVN------CVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVR 328
+K G + V NSLI+MY + G +E F + E+ VS ++ +
Sbjct: 411 HVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQ 470
Query: 329 DLNSDETLN---------HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKS 379
+ +E L + +H T IG +LS G + +G + + +
Sbjct: 471 NGYGNEALELFREMLESGEKPDHITMIG--------VLSACGHAGFVEEGRHYFSSMTRD 522
Query: 380 -GFETNLSINNALISMYSKCGNKEAALQVFNDMG-DRNVITWTSIISGFAKHGYATKALE 437
G ++ + + G E A + +M + + W S+++ H T
Sbjct: 523 FGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKY 582
Query: 438 LFYEMLETGVKP-NDVTYIAVLSACSHVGLIDEGWKHFNSMR 478
+ ++LE V+P N Y+ + + + +G ++ SMR
Sbjct: 583 VAEKLLE--VEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMR 622
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 119/233 (51%), Gaps = 21/233 (9%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR 62
++R++VSW ++++ + N EAL F + P Y F L+AC++ +G
Sbjct: 347 AERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGM 406
Query: 63 VVFGSVLKTGY-FDS----HVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMM 117
VLK G+ F S + VG LIDM+VK CG +E + VF KM ER+ V+WN M+
Sbjct: 407 QAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVK-CGCVEEGYLVFRKMMERDCVSWNAMI 465
Query: 118 TRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRS-GL 176
FAQ GY ++++LF ML SG PD T+ L+AC + G+ S + R G+
Sbjct: 466 IGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGV 525
Query: 177 ALDLCVGCSLVDMYAKCAVD-----GSLVDSRRVFNSMP-EHNVVSWTALIAG 223
A L D Y C VD G L +++ + MP + + V W +L+A
Sbjct: 526 A-------PLRDHYT-CMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAA 570
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 386 bits (991), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/581 (34%), Positives = 341/581 (58%), Gaps = 9/581 (1%)
Query: 147 TLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVF 206
T + + AC L+ + K+++ +++ +G + + ++ M+ KC G ++D+RR+F
Sbjct: 125 TYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKC---GMIIDARRLF 181
Query: 207 NSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDF 266
+ +PE N+ S+ ++I+G+V G EA LF M + TF+ +L+A A L
Sbjct: 182 DEIPERNLYSYYSIISGFV-NFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSI 240
Query: 267 GFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVI 326
G+QLH +KLG+ V+ LI+MY++ G +E AR F+ + EK+ V+ ++
Sbjct: 241 YVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGY 300
Query: 327 VRDLNSDETLNHETE-HTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNL 385
S+E L + +G+ FT + ++ + + + +Q HA ++++GFE+ +
Sbjct: 301 ALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEI 360
Query: 386 SINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLET 445
N AL+ YSK G + A VF+ + +N+I+W +++ G+A HG T A++LF +M+
Sbjct: 361 VANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAA 420
Query: 446 GVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSE 505
V PN VT++AVLSAC++ GL ++GW+ F SM HG+ PR HYACM+++LGR GLL E
Sbjct: 421 NVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDE 480
Query: 506 AIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYAT 565
AI FI PL +W +LL +CR+ N ELG A+ + P Y+++ N+Y +
Sbjct: 481 AIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNS 540
Query: 566 EERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDT----SHPQAQKIYDELDE 621
+ + A + +T++ K + +W+EV +Q H F GD + ++IY ++DE
Sbjct: 541 MGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQIYQKVDE 600
Query: 622 LASKIKKLGYVPNTDFVLHDVEDEQKEQYLFQHSEKIAVAFALISIPNPKPIRIFKNLRV 681
L +I + GY +L DV+++++E+ HSEK+A+A+ L++ P P++I +N R+
Sbjct: 601 LMEEISEYGYSEEEQHLLPDVDEKEEERVGRYHSEKLAIAYGLVNTPEWNPLQITQNHRI 660
Query: 682 CGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGTCSCNDYW 722
C +CH +++IS VTGR +VVRDA+RFHH K+G CSC YW
Sbjct: 661 CKNCHKVVEFISLVTGREMVVRDASRFHHFKEGKCSCGGYW 701
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 96/258 (37%), Positives = 141/258 (54%), Gaps = 6/258 (2%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
+R+L S+ S++S F N EA F M E + F LRA + VG+
Sbjct: 186 ERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQ 245
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
+ LK G D + V C LIDM+ K CGDIE A FE M E+ V WN ++ +A
Sbjct: 246 LHVCALKLGVVD-NTFVSCGLIDMYSK-CGDIEDARCAFECMPEKTTVAWNNVIAGYALH 303
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVG 183
GY E+++ L + M SG + D+FTL+ + +L L + KQ H+ +IR+G ++
Sbjct: 304 GYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVAN 363
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQ 243
+LVD Y+K G + +R VF+ +P N++SW AL+ GY G+ +A++LF M+
Sbjct: 364 TALVDFYSKW---GRVDTARYVFDKLPRKNIISWNALMGGYA-NHGRGTDAVKLFEKMIA 419
Query: 244 GNVAPNGFTFSSVLKACA 261
NVAPN TF +VL ACA
Sbjct: 420 ANVAPNHVTFLAVLSACA 437
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 139/274 (50%), Gaps = 6/274 (2%)
Query: 45 FTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEK 104
+ A + AC + V+G ++ G F+ + ++ M VK CG I A R+F++
Sbjct: 126 YDALVEACIRLKSIRCVKRVYGFMMSNG-FEPEQYMMNRILLMHVK-CGMIIDARRLFDE 183
Query: 105 MQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVG 164
+ ERN+ ++ +++ F G ++ +LF M + T L A A L + VG
Sbjct: 184 IPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVG 243
Query: 165 KQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGY 224
KQLH ++ G+ + V C L+DMY+KC G + D+R F MPE V+W +IAGY
Sbjct: 244 KQLHVCALKLGVVDNTFVSCGLIDMYSKC---GDIEDARCAFECMPEKTTVAWNNVIAGY 300
Query: 225 VRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAV 284
G +EA+ L DM V+ + FT S +++ L +Q H+ I+ G +
Sbjct: 301 AL-HGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESE 359
Query: 285 NCVANSLINMYARSGRLECARKCFDLLFEKSLVS 318
+L++ Y++ GR++ AR FD L K+++S
Sbjct: 360 IVANTALVDFYSKWGRVDTARYVFDKLPRKNIIS 393
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 385 bits (990), Expect = e-107, Method: Compositional matrix adjust.
Identities = 221/613 (36%), Positives = 344/613 (56%), Gaps = 17/613 (2%)
Query: 38 FYPNEYCFTAALRACSNSLYFS-VGRVVFGSVLKTGYF------DSH---VSVGCELIDM 87
F N + L C +F +G + S++K F D H + V L+ +
Sbjct: 40 FLLNHVDMSLLLSICGREGWFPHLGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSL 99
Query: 88 FVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFT 147
+ K CG + A ++F++M R+V++ N++ F + E L RML SG D T
Sbjct: 100 YAK-CGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGF-DHAT 157
Query: 148 LTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFN 207
LT L+ C E V K +H+ I SG ++ VG L+ Y KC G V R VF+
Sbjct: 158 LTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKC---GCSVSGRGVFD 214
Query: 208 SMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFG 267
M NV++ TA+I+G + E + +RLF M +G V PN T+ S L AC+
Sbjct: 215 GMSHRNVITLTAVISGLIENELHE-DGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIV 273
Query: 268 FGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIV 327
G+Q+H+ K G+ + C+ ++L++MY++ G +E A F+ E VS I+ +
Sbjct: 274 EGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLA 333
Query: 328 RDLNSDETLNHETEH-TTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLS 386
++ + +E + G+ + + +L + ++G G+Q+H+LV+K F N
Sbjct: 334 QNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTF 393
Query: 387 INNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETG 446
+NN LI+MYSKCG+ + VF M RN ++W S+I+ FA+HG+ AL+L+ EM
Sbjct: 394 VNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLE 453
Query: 447 VKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEA 506
VKP DVT++++L ACSHVGLID+G + N M+ HG+ PR EHY C++D+LGR+GLL EA
Sbjct: 454 VKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEA 513
Query: 507 IEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATE 566
FI+S+PL D +W++LLG+C HG+TE+GE+AA+ + + P + +IL++N+Y++
Sbjct: 514 KSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSR 573
Query: 567 ERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELDELASKI 626
+W + A K MK + KE G S IE+E++ H F V D HPQA+ IYD L L +
Sbjct: 574 GKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFPVM 633
Query: 627 KKLGYVPNTDFVL 639
GY P+ F+L
Sbjct: 634 VDEGYRPDKRFIL 646
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 160/310 (51%), Gaps = 7/310 (2%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR 62
S R++++ +++S N + + L F M +PN + +AL ACS S G+
Sbjct: 217 SHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQ 276
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
+ + K G +S + + L+DM+ K CG IE A +FE E + V+ +++ AQ
Sbjct: 277 QIHALLWKYG-IESELCIESALMDMYSK-CGSIEDAWTIFESTTEVDEVSMTVILVGLAQ 334
Query: 123 MGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCV 182
G E++I F RML +G D +++ L L +GKQLHS VI+ + + V
Sbjct: 335 NGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFV 394
Query: 183 GCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDML 242
L++MY+KC G L DS+ VF MP+ N VSW ++IA + R G A++L+ +M
Sbjct: 395 NNGLINMYSKC---GDLTDSQTVFRRMPKRNYVSWNSMIAAFAR-HGHGLAALKLYEEMT 450
Query: 243 QGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKL-GLSAVNCVANSLINMYARSGRL 301
V P TF S+L AC+++ G +L ++ ++ G+ +I+M R+G L
Sbjct: 451 TLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLL 510
Query: 302 ECARKCFDLL 311
+ A+ D L
Sbjct: 511 KEAKSFIDSL 520
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 384 bits (985), Expect = e-106, Method: Compositional matrix adjust.
Identities = 222/592 (37%), Positives = 339/592 (57%), Gaps = 17/592 (2%)
Query: 7 LVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFG 66
+VSW M+S + ++ AL F +M G N T+ + AC V
Sbjct: 316 VVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHA 375
Query: 67 SVLKTG-YFDSHVSVGCELIDMFVKGCGDIESAHRVFEKM---QERNVVTWNLMMTRFAQ 122
V K+G Y DS SV LI M+ K GDI+ + +VFE + Q +N+V N+M+T F+Q
Sbjct: 376 WVFKSGFYLDS--SVAAALISMYSKS-GDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQ 430
Query: 123 MGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCV 182
P +I LF RML G D F++ S L+ L+ L++GKQ+H + ++SGL LDL V
Sbjct: 431 SKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTV 487
Query: 183 GCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDML 242
G SL +Y+KC GSL +S ++F +P + W ++I+G+ G +EA+ LF +ML
Sbjct: 488 GSSLFTLYSKC---GSLEESYKLFQGIPFKDNACWASMISGF-NEYGYLREAIGLFSEML 543
Query: 243 QGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLE 302
+P+ T ++VL C++ P G+++H T++ G+ + ++L+NMY++ G L+
Sbjct: 544 DDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLK 603
Query: 303 CARKCFDLLFEKSLVSCETIVDVIVR-DLNSDETLNHETEHTTGIGACSFTYACLLSGAA 361
AR+ +D L E VSC +++ + L D L +G SF + +L AA
Sbjct: 604 LARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAA 663
Query: 362 CIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTS 421
G Q+HA + K G T S+ ++L++MYSK G+ + + F+ + ++I WT+
Sbjct: 664 LSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTA 723
Query: 422 IISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCH 481
+I+ +A+HG A +AL+++ M E G KP+ VT++ VLSACSH GL++E + H NSM +
Sbjct: 724 LIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDY 783
Query: 482 GVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHA 541
G+ P HY CMVD LGRSG L EA FIN+M + DA+VW +LL +C++HG ELG+ A
Sbjct: 784 GIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVA 843
Query: 542 AKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWI 593
AK +E EP D YI LSN+ A W +V RK MK + KE G+S +
Sbjct: 844 AKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 172 bits (437), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 118/429 (27%), Positives = 224/429 (52%), Gaps = 20/429 (4%)
Query: 40 PNEYCFTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAH 99
P+ Y +++ L AC++ G+VV V+K G D V V ++D++ K CG + A
Sbjct: 249 PDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAED--VFVCTAIVDLYAK-CGHMAEAM 305
Query: 100 RVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELE 159
VF ++ +VV+W +M++ + + ++++F M SG + T+TS ++AC
Sbjct: 306 EVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPS 365
Query: 160 LLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPE---HNVVS 216
++ Q+H+WV +SG LD V +L+ MY+K G + S +VF + + N+V+
Sbjct: 366 MVCEASQVHAWVFKSGFYLDSSVAAALISMYSK---SGDIDLSEQVFEDLDDIQRQNIVN 422
Query: 217 WTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKA--CANLPDFGFGEQLHS 274
+I + + S + +A+RLF MLQ + + F+ S+L C NL G+Q+H
Sbjct: 423 --VMITSFSQ-SKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNL-----GKQVHG 474
Query: 275 QTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDE 334
T+K GL V +SL +Y++ G LE + K F + K +++ E
Sbjct: 475 YTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLRE 534
Query: 335 TLNHETEH-TTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALIS 393
+ +E G T A +L+ + ++ +G++IH +++G + + + +AL++
Sbjct: 535 AIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVN 594
Query: 394 MYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVT 453
MYSKCG+ + A QV++ + + + ++ +S+ISG+++HG LF +M+ +G +
Sbjct: 595 MYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFA 654
Query: 454 YIAVLSACS 462
++L A +
Sbjct: 655 ISSILKAAA 663
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 116/448 (25%), Positives = 221/448 (49%), Gaps = 22/448 (4%)
Query: 93 GDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSAL 152
G + A ++F+ + + +VV+ N+M++ + Q E+S+ F +M G+ + + S +
Sbjct: 98 GSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVI 157
Query: 153 TACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH 212
+AC+ L+ + + I+ G V +L+D+++K + D+ +VF
Sbjct: 158 SACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSK---NLRFEDAYKVFRDSLSA 214
Query: 213 NVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQL 272
NV W +IAG +R LF +M G P+ +T+SSVL ACA+L FG+ +
Sbjct: 215 NVYCWNTIIAGALRNQNY-GAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVV 273
Query: 273 HSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNS 332
++ IK G V V +++++YA+ G + A + F + S+VS ++ + ++
Sbjct: 274 QARVIKCGAEDV-FVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDA 332
Query: 333 DETLN--HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNA 390
L E H +G+ + T ++S + + Q+HA V KSGF + S+ A
Sbjct: 333 FSALEIFKEMRH-SGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAA 391
Query: 391 LISMYSKCGNKEAALQVFNDMGD---RNVITWTSIISGFAKHGYATKALELFYEMLETGV 447
LISMYSK G+ + + QVF D+ D +N++ +I+ F++ KA+ LF ML+ G+
Sbjct: 392 LISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGL 449
Query: 448 KPNDVTYIAVLSA--CSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSE 505
+ ++ + ++LS C ++G K + G+V + + + + + G L E
Sbjct: 450 RTDEFSVCSLLSVLDCLNLG------KQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEE 503
Query: 506 AIEFINSMPLDADAMVWRSLLGSCRVHG 533
+ + +P +A W S++ +G
Sbjct: 504 SYKLFQGIPFKDNA-CWASMISGFNEYG 530
Score = 145 bits (367), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 165/305 (54%), Gaps = 13/305 (4%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
+D W SM+S F EA+ F +ML+ G P+E A L CS+ G+ +
Sbjct: 514 KDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEI 573
Query: 65 FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG 124
G L+ G D + +G L++M+ K CG ++ A +V++++ E + V+ + +++ ++Q G
Sbjct: 574 HGYTLRAG-IDKGMDLGSALVNMYSK-CGSLKLARQVYDRLPELDPVSCSSLISGYSQHG 631
Query: 125 YPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGC 184
+D LF M++SG+T D F ++S L A A + S+G Q+H+++ + GL + VG
Sbjct: 632 LIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGS 691
Query: 185 SLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQG 244
SL+ MY+K GS+ D + F+ + ++++WTALIA Y + G+ EA++++ M +
Sbjct: 692 SLLTMYSKF---GSIDDCCKAFSQINGPDLIAWTALIASYAQ-HGKANEALQVYNLMKEK 747
Query: 245 NVAPNGFTFSSVLKACANLPDFGFGEQ----LHSQTIKLGLSAVNCVANSLINMYARSGR 300
P+ TF VL AC++ G E+ L+S G+ N +++ RSGR
Sbjct: 748 GFKPDKVTFVGVLSACSH---GGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGR 804
Query: 301 LECAR 305
L A
Sbjct: 805 LREAE 809
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 117/249 (46%), Gaps = 20/249 (8%)
Query: 287 VANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETE-HTTG 345
+ SL++ Y+ SG + A K FD + + +VSC ++ + +E+L ++ H G
Sbjct: 86 LTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLG 145
Query: 346 IGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAAL 405
A +Y ++S + + E + +K G+ + +ALI ++SK E A
Sbjct: 146 FEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAY 205
Query: 406 QVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVG 465
+VF D NV W +II+G ++ +LF+EM KP+ TY +VL+AC+ +
Sbjct: 206 KVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASL- 264
Query: 466 LIDEGWKHFNSMRHCHGVVPRV------EHYAC--MVDVLGRSGLLSEAIEFINSMPLDA 517
+R V RV + + C +VD+ + G ++EA+E + +P +
Sbjct: 265 ---------EKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIP-NP 314
Query: 518 DAMVWRSLL 526
+ W +L
Sbjct: 315 SVVSWTVML 323
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 381 bits (978), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/611 (33%), Positives = 340/611 (55%), Gaps = 47/611 (7%)
Query: 152 LTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRR------- 204
L +C+ L + +H +++R+ L D+ V L+ A C D +
Sbjct: 19 LQSCSSFSDLKI---IHGFLLRTHLISDVFVASRLL---ALCVDDSTFNKPTNLLGYAYG 72
Query: 205 VFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLP 264
+F+ + N+ + LI + G+ + +A + ML+ + P+ TF ++KA + +
Sbjct: 73 IFSQIQNPNLFVFNLLIRCFSTGA-EPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEME 131
Query: 265 DFGFGEQLHSQTIKLGLSAVNCVANSLINMYA---------------------------- 296
GEQ HSQ ++ G V NSL++MYA
Sbjct: 132 CVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVA 191
Query: 297 ---RSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFT 352
+ G +E AR+ FD + ++L + +++ ++ ++ ++ E G+ A
Sbjct: 192 GYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETV 251
Query: 353 YACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMG 412
++S A +G + GE+ + VVKS NL + AL+ M+ +CG+ E A+ VF +
Sbjct: 252 MVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLP 311
Query: 413 DRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWK 472
+ + ++W+SII G A HG+A KA+ F +M+ G P DVT+ AVLSACSH GL+++G +
Sbjct: 312 ETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLE 371
Query: 473 HFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVH 532
+ +M+ HG+ PR+EHY C+VD+LGR+G L+EA FI M + +A + +LLG+C+++
Sbjct: 372 IYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIY 431
Query: 533 GNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSW 592
NTE+ E M+++ +P Y+LLSN+YA +W + ++R MK+K + K G+S
Sbjct: 432 KNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSL 491
Query: 593 IEVENQVHKFHVG-DTSHPQAQKIYDELDELASKIKKLGYVPNTDFVLHDVEDEQKEQYL 651
IE++ +++KF +G D HP+ KI + +E+ KI+ +GY NT DV++E+KE +
Sbjct: 492 IEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSI 551
Query: 652 FQHSEKIAVAFALISIPNPKPIRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHI 711
HSEK+A+A+ ++ IRI KNLRVC DCHT K IS+V GR ++VRD NRFHH
Sbjct: 552 HMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHF 611
Query: 712 KDGTCSCNDYW 722
++G CSC DYW
Sbjct: 612 RNGVCSCRDYW 622
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 113/449 (25%), Positives = 201/449 (44%), Gaps = 42/449 (9%)
Query: 47 AALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCELIDM------FVKGCGDIESAHR 100
A L++CS+ FS +++ G +L+T + S V V L+ + F K + A+
Sbjct: 17 ALLQSCSS---FSDLKIIHGFLLRT-HLISDVFVASRLLALCVDDSTFNKPTNLLGYAYG 72
Query: 101 VFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELEL 160
+F ++Q N+ +NL++ F+ P + + +ML S PD T + A +E+E
Sbjct: 73 IFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMEC 132
Query: 161 LSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVD------------------------ 196
+ VG+Q HS ++R G D+ V SLV MYA C
Sbjct: 133 VLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAG 192
Query: 197 ----GSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFT 252
G + ++R +F+ MP N+ +W+ +I GY + + E+ A+ LF M + V N
Sbjct: 193 YCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEK-AIDLFEFMKREGVVANETV 251
Query: 253 FSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLF 312
SV+ +CA+L FGE+ + +K ++ + +L++M+ R G +E A F+ L
Sbjct: 252 MVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLP 311
Query: 313 EKSLVSCETIVDVIVRDLNSDETLNHETEHTT-GIGACSFTYACLLSGAACIGTIGKGEQ 371
E +S +I+ + ++ + +++ ++ + G T+ +LS + G + KG +
Sbjct: 312 ETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLE 371
Query: 372 IHALVVKS-GFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHG 430
I+ + K G E L ++ M + G A M + + G K
Sbjct: 372 IYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIY 431
Query: 431 YATKALELFYEMLETGVKPNDVTYIAVLS 459
T+ E ML VKP Y +LS
Sbjct: 432 KNTEVAERVGNML-IKVKPEHSGYYVLLS 459
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 153/324 (47%), Gaps = 44/324 (13%)
Query: 13 MMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVLKTG 72
++ CF+ + +A + ML+ +P+ F ++A S VG +++ G
Sbjct: 88 LIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFG 147
Query: 73 YFDSHVSVGCELIDMF---------------------------VKG---CGDIESAHRVF 102
F + V V L+ M+ V G CG +E+A +F
Sbjct: 148 -FQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMF 206
Query: 103 EKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLS 162
++M RN+ TW++M+ +A+ E +IDLF M G + + S +++CA L L
Sbjct: 207 DEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALE 266
Query: 163 VGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIA 222
G++ + +V++S + ++L +G +LVDM+ +C G + + VF +PE + +SW+++I
Sbjct: 267 FGERAYEYVVKSHMTVNLILGTALVDMFWRC---GDIEKAIHVFEGLPETDSLSWSSIIK 323
Query: 223 GYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQT-----I 277
G + G +AM F M+ P TF++VL AC++ G +++ I
Sbjct: 324 G-LAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGI 382
Query: 278 KLGLSAVNCVANSLINMYARSGRL 301
+ L C+ ++M R+G+L
Sbjct: 383 EPRLEHYGCI----VDMLGRAGKL 402
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 91/195 (46%), Gaps = 33/195 (16%)
Query: 5 RDLVSWCSMMSCFAN-----------NSMEHEALVTF----------------LDMLE-- 35
RD+VSW SM++ + + M H L T+ +D+ E
Sbjct: 181 RDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFM 240
Query: 36 --HGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCG 93
G NE + + +C++ G + V+K+ + ++ +G L+DMF + CG
Sbjct: 241 KREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKS-HMTVNLILGTALVDMFWR-CG 298
Query: 94 DIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALT 153
DIE A VFE + E + ++W+ ++ A G+ ++ F +M+ G+ P T T+ L+
Sbjct: 299 DIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLS 358
Query: 154 ACAELELLSVGKQLH 168
AC+ L+ G +++
Sbjct: 359 ACSHGGLVEKGLEIY 373
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 378 bits (971), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/628 (33%), Positives = 349/628 (55%), Gaps = 13/628 (2%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
+R+LVS+ S+++ ++ N EA+ +L ML+ P+++ F + ++AC++S +G+
Sbjct: 130 ERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQ 189
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
+ V+K SH+ LI M+V+ + A RVF + +++++W+ ++ F+Q+
Sbjct: 190 LHAQVIKLES-SSHLIAQNALIAMYVR-FNQMSDASRVFYGIPMKDLISWSSIIAGFSQL 247
Query: 124 GYPEDSIDLFFRMLLSG-YTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCV 182
G+ +++ ML G + P+ + S+L AC+ L G Q+H I+S LA +
Sbjct: 248 GFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIA 307
Query: 183 GCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDML 242
GCSL DMYA+C G L +RRVF+ + + SW +IAG + +G EA+ +F M
Sbjct: 308 GCSLCDMYARC---GFLNSARRVFDQIERPDTASWNVIIAG-LANNGYADEAVSVFSQMR 363
Query: 243 QGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLE 302
P+ + S+L A G Q+HS IK G A V NSL+ MY L
Sbjct: 364 SSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLY 423
Query: 303 CARKCF-DLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACS---FTYACLLS 358
C F D VS TI+ ++ E L + C T LL
Sbjct: 424 CCFNLFEDFRNNADSVSWNTILTACLQHEQPVEML--RLFKLMLVSECEPDHITMGNLLR 481
Query: 359 GAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVIT 418
G I ++ G Q+H +K+G I N LI MY+KCG+ A ++F+ M +R+V++
Sbjct: 482 GCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVS 541
Query: 419 WTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMR 478
W+++I G+A+ G+ +AL LF EM G++PN VT++ VL+ACSHVGL++EG K + +M+
Sbjct: 542 WSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQ 601
Query: 479 HCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELG 538
HG+ P EH +C+VD+L R+G L+EA FI+ M L+ D +VW++LL +C+ GN L
Sbjct: 602 TEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLA 661
Query: 539 EHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQ 598
+ AA+ IL+ +P + ++LL +++A+ W + A +R +MK+ + K G SWIE+E++
Sbjct: 662 QKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDK 721
Query: 599 VHKFHVGDTSHPQAQKIYDELDELASKI 626
+H F D HP+ IY L + S++
Sbjct: 722 IHIFFAEDIFHPERDDIYTVLHNIWSQM 749
Score = 203 bits (517), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 144/507 (28%), Positives = 258/507 (50%), Gaps = 26/507 (5%)
Query: 51 ACSNSLYFSVGRVVFGSVLKTG-YFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERN 109
ACS+S + GR + +L + +D+ + ++ M+ K CG + A VF+ M ERN
Sbjct: 76 ACSSSRSLAQGRKIHDHILNSNCKYDT--ILNNHILSMYGK-CGSLRDAREVFDFMPERN 132
Query: 110 VVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHS 169
+V++ ++T ++Q G ++I L+ +ML PD+F S + ACA + +GKQLH+
Sbjct: 133 LVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHA 192
Query: 170 WVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSG 229
VI+ + L +L+ MY + + D+ RVF +P +++SW+++IAG+ + G
Sbjct: 193 QVIKLESSSHLIAQNALIAMYVRF---NQMSDASRVFYGIPMKDLISWSSIIAGFSQ-LG 248
Query: 230 QEQEAMRLFCDMLQ-GNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVA 288
E EA+ +ML G PN + F S LKAC++L +G Q+H IK L+
Sbjct: 249 FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAG 308
Query: 289 NSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETE-HTTGIG 347
SL +MYAR G L AR+ FD + S I+ + + +DE ++ ++ ++G
Sbjct: 309 CSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFI 368
Query: 348 ACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQV 407
+ + LL + +G QIH+ ++K GF +L++ N+L++MY+ C + +
Sbjct: 369 PDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNL 428
Query: 408 FNDM-GDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGL 466
F D + + ++W +I++ +H + L LF ML + +P+ +T +L C +
Sbjct: 429 FEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISS 488
Query: 467 IDEGWKHFNSMRHCH----GVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVW 522
+ G S HC+ G+ P ++D+ + G L +A +SM + D + W
Sbjct: 489 LKLG-----SQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMD-NRDVVSW 542
Query: 523 RSLLGSCRVHGNTELGEHAAKMILERE 549
+L+ + + GE A +IL +E
Sbjct: 543 STLIVG---YAQSGFGEEA--LILFKE 564
Score = 180 bits (457), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 121/397 (30%), Positives = 204/397 (51%), Gaps = 25/397 (6%)
Query: 147 TLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVF 206
T S + AC+ L+ G+++H ++ S D + ++ MY KC GSL D+R VF
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKC---GSLRDAREVF 125
Query: 207 NSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDF 266
+ MPE N+VS+T++I GY + +GQ EA+RL+ MLQ ++ P+ F F S++KACA+ D
Sbjct: 126 DFMPERNLVSYTSVITGYSQ-NGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDV 184
Query: 267 GFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVI 326
G G+QLH+Q IKL S+ N+LI MY R ++ A + F + K L+S +I+
Sbjct: 185 GLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGF 244
Query: 327 VRDLNSDETLNHETEHTT-GI-GACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETN 384
+ E L+H E + G+ + + L + + G QIH L +KS N
Sbjct: 245 SQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGN 304
Query: 385 LSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLE 444
+L MY++CG +A +VF+ + + +W II+G A +GYA +A+ +F +M
Sbjct: 305 AIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRS 364
Query: 445 TGVKPNDVTYIAVLSACSHVGLIDEG---------WKHFNSMRHCHGVVPRVEHYACMVD 495
+G P+ ++ ++L A + + +G W + C+ ++ Y D
Sbjct: 365 SGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTM---YTFCSD 421
Query: 496 VLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVH 532
+ L +F N +AD++ W ++L +C H
Sbjct: 422 LYCCFNLFE---DFRN----NADSVSWNTILTACLQH 451
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 114/220 (51%), Gaps = 16/220 (7%)
Query: 352 TYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDM 411
TY L+ + ++ +G +IH ++ S + + +NN ++SMY KCG+ A +VF+ M
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 412 GDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGW 471
+RN++++TS+I+G++++G +A+ L+ +ML+ + P+ + +++ AC+ + G
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLG- 187
Query: 472 KHFNSMRHCHGVVPRVEHYA------CMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSL 525
+ H V ++E + ++ + R +S+A +P+ D + W S+
Sbjct: 188 ------KQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMK-DLISWSSI 240
Query: 526 L-GSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYA 564
+ G ++ E H +M+ H P YI S+L A
Sbjct: 241 IAGFSQLGFEFEALSHLKEMLSFGVFH-PNEYIFGSSLKA 279
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 377 bits (968), Expect = e-104, Method: Compositional matrix adjust.
Identities = 231/723 (31%), Positives = 371/723 (51%), Gaps = 36/723 (4%)
Query: 6 DLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVF 65
D +SW M+S EAL + +M++ G PNE+ F L A S+ L G+ +
Sbjct: 189 DTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGA-SSFLGLEFGKTIH 247
Query: 66 GSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGY 125
+++ G +V + L+D F +E A RV E++V W +++ F +
Sbjct: 248 SNIIVRG-IPLNVVLKTSLVD-FYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLR 305
Query: 126 PEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCS 185
++++ F M G P+ FT ++ L+ C+ + L GKQ+HS I+ G VG +
Sbjct: 306 AKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNA 365
Query: 186 LVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGN 245
LVDMY KC+ S V++ RVF +M NVVSWT LI G V G Q+ L +M++
Sbjct: 366 LVDMYMKCS--ASEVEASRVFGAMVSPNVVSWTTLILGLV-DHGFVQDCFGLLMEMVKRE 422
Query: 246 VAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECAR 305
V PN T S VL+AC+ L ++H+ ++ + V NSL++ YA S +++ A
Sbjct: 423 VEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAW 482
Query: 306 KCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETE-------HTTGIGACSFTYACLLS 358
+ + ++ ++V +E HE + GI + +S
Sbjct: 483 NVIRSMKRRDNITYTSLVTRF------NELGKHEMALSVINYMYGDGIRMDQLSLPGFIS 536
Query: 359 GAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVIT 418
+A +G + G+ +H VKSGF S+ N+L+ MYSKCG+ E A +VF ++ +V++
Sbjct: 537 ASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVS 596
Query: 419 WTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMR 478
W ++SG A +G+ + AL F EM +P+ VT++ +LSACS+ L D G ++F M+
Sbjct: 597 WNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMK 656
Query: 479 HCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELG 538
+ + P+VEHY +V +LGR+G L EA + +M L +AM++++LL +CR GN LG
Sbjct: 657 KIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLG 716
Query: 539 EHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQ 598
E A L P DPA YILL++LY + R M +K++ K+ G S +EV+ +
Sbjct: 717 EDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGK 776
Query: 599 VHKFHVGDTSH-PQAQKIYDELDELASKIKKLG--YVPNTDFVLHDVEDEQKEQYLFQHS 655
VH F D + + IY E++ + +IK+ G Y N + HS
Sbjct: 777 VHSFVSEDVTRVDKTNGIYAEIESIKEEIKRFGSPYRGNENASF--------------HS 822
Query: 656 EKIAVAFALISIPNPKPIRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGT 715
K AV + I P+ + KN +C DCH + ++++ + I VRD N+ H K+G
Sbjct: 823 AKQAVVYGFIYASPEAPVHVVKNKILCKDCHEFVSILTRLVDKKITVRDGNQVHIFKNGE 882
Query: 716 CSC 718
CSC
Sbjct: 883 CSC 885
Score = 223 bits (568), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 158/572 (27%), Positives = 283/572 (49%), Gaps = 33/572 (5%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR 62
S R + +W M+S F + AL F +M+ G +PNE+ F++ +R+C+ S G
Sbjct: 85 SHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGG 144
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
V GSV+KTG F+ + VG L D++ K CG + A +F +Q + ++W +M++
Sbjct: 145 RVHGSVIKTG-FEGNSVVGSSLSDLYSK-CGQFKEACELFSSLQNADTISWTMMISSLVG 202
Query: 123 MGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCV 182
+++ + M+ +G P+ FT L A + L L GK +HS +I G+ L++ +
Sbjct: 203 ARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVL 261
Query: 183 GCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDML 242
SLVD Y++ + + D+ RV NS E +V WT++++G+VR + +EA+ F +M
Sbjct: 262 KTSLVDFYSQFS---KMEDAVRVLNSSGEQDVFLWTSVVSGFVRNL-RAKEAVGTFLEMR 317
Query: 243 QGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLE 302
+ PN FT+S++L C+ + FG+Q+HSQTIK+G V N+L++MY + E
Sbjct: 318 SLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASE 377
Query: 303 C-ARKCFDLLFEKSLVSCET-IVDVIVRDLNSD------ETLNHETEHTTGIGACSFTYA 354
A + F + ++VS T I+ ++ D E + E E T +
Sbjct: 378 VEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNV------VTLS 431
Query: 355 CLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDR 414
+L + + + + +IHA +++ + + + N+L+ Y+ + A V M R
Sbjct: 432 GVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRR 491
Query: 415 NVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHF 474
+ IT+TS+++ F + G AL + M G++ + ++ +SA +++G ++ G KH
Sbjct: 492 DNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETG-KHL 550
Query: 475 NSMRHCHGVVPRVEHYA----CMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCR 530
HC+ V A +VD+ + G L +A + + D + W L+
Sbjct: 551 ----HCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIA-TPDVVSWNGLVSGLA 605
Query: 531 VHG--NTELGEHAAKMILEREPHDPATYILLS 560
+G ++ L + E EP ILLS
Sbjct: 606 SNGFISSALSAFEEMRMKETEPDSVTFLILLS 637
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 124/383 (32%), Positives = 216/383 (56%), Gaps = 8/383 (2%)
Query: 84 LIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTP 143
L+ +++K G I +A ++F++M R V W +M++ F + ++ LF M+ SG P
Sbjct: 64 LLSLYLKTDG-IWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHP 122
Query: 144 DRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSR 203
+ FT +S + +CA L +S G ++H VI++G + VG SL D+Y+KC G ++
Sbjct: 123 NEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKC---GQFKEAC 179
Query: 204 RVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANL 263
+F+S+ + +SWT +I+ V G+ + +EA++ + +M++ V PN FTF +L A + L
Sbjct: 180 ELFSSLQNADTISWTMMISSLV-GARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFL 238
Query: 264 PDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIV 323
FG+ +HS I G+ + SL++ Y++ ++E A + + E+ + ++V
Sbjct: 239 -GLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVV 297
Query: 324 DVIVRDLNSDETLNHETE-HTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFE 382
VR+L + E + E + G+ +FTY+ +LS + + ++ G+QIH+ +K GFE
Sbjct: 298 SGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFE 357
Query: 383 TNLSINNALISMYSKCGNKEA-ALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYE 441
+ + NAL+ MY KC E A +VF M NV++WT++I G HG+ L E
Sbjct: 358 DSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLME 417
Query: 442 MLETGVKPNDVTYIAVLSACSHV 464
M++ V+PN VT VL ACS +
Sbjct: 418 MVKREVEPNVVTLSGVLRACSKL 440
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 132/259 (50%), Gaps = 4/259 (1%)
Query: 269 GEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVR 328
G +H IK GL + N+L+++Y ++ + ARK FD + +++ + ++ +
Sbjct: 42 GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTK 101
Query: 329 DLNSDETLN-HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSI 387
L+ E +G FT++ ++ A + I G ++H V+K+GFE N +
Sbjct: 102 SQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVV 161
Query: 388 NNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGV 447
++L +YSKCG + A ++F+ + + + I+WT +IS +AL+ + EM++ GV
Sbjct: 162 GSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGV 221
Query: 448 KPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAI 507
PN+ T++ +L A S +GL E K +S G+ V +VD + + +A+
Sbjct: 222 PPNEFTFVKLLGASSFLGL--EFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAV 279
Query: 508 EFINSMPLDADAMVWRSLL 526
+NS + D +W S++
Sbjct: 280 RVLNSSG-EQDVFLWTSVV 297
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 377 bits (968), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/597 (34%), Positives = 338/597 (56%), Gaps = 21/597 (3%)
Query: 6 DLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVF 65
D W M+ C+ N E + + +++HGF ++ F+ AL+AC+ G+ +
Sbjct: 106 DFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIH 165
Query: 66 GSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGY 125
++K FD+ V G L+DM+ K CG+I+SAH+VF + RNVV W M+ + +
Sbjct: 166 CQLVKVPSFDNVVLTG--LLDMYAK-CGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDL 222
Query: 126 PEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCS 185
E+ + LF RM + + +T + + AC +L L GK H +++SG+ L C+ S
Sbjct: 223 CEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTS 282
Query: 186 LVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGN 245
L+DMY KC G + ++RRVFN ++V WTA+I GY +G EA+ LF M
Sbjct: 283 LLDMYVKC---GDISNARRVFNEHSHVDLVMWTAMIVGYTH-NGSVNEALSLFQKMKGVE 338
Query: 246 VAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECAR 305
+ PN T +SVL C + + G +H +IK+G+ N VAN+L++MYA+ + A+
Sbjct: 339 IKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTN-VANALVHMYAKCYQNRDAK 397
Query: 306 KCFDLLFEKSLVSCETIVDVIVRDLNSDETL------NHETEHTTGIGACSFTYACLLSG 359
F++ EK +V+ +I+ ++ + E L N E+ G+ T A L S
Sbjct: 398 YVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGV-----TVASLFSA 452
Query: 360 AACIGTIGKGEQIHALVVKSGF--ETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVI 417
A +G++ G +HA VK GF +++ + AL+ Y+KCG+ ++A +F+ + ++N I
Sbjct: 453 CASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTI 512
Query: 418 TWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSM 477
TW+++I G+ K G +LELF EML+ KPN+ T+ ++LSAC H G+++EG K+F+SM
Sbjct: 513 TWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSM 572
Query: 478 RHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTEL 537
+ P +HY CMVD+L R+G L +A++ I MP+ D + + L C +H +L
Sbjct: 573 YKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDL 632
Query: 538 GEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIE 594
GE K +L+ P D + Y+L+SNLYA++ RW +R MKQ+ + K AG+S +E
Sbjct: 633 GEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 138/490 (28%), Positives = 245/490 (50%), Gaps = 18/490 (3%)
Query: 78 VSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRML 137
+S+ +L+ ++ G + A VF+++ E + W +M+ + + + L+ ++
Sbjct: 76 ISIATKLVSLY-GFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLM 134
Query: 138 LSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDG 197
G+ D + AL AC EL+ L GK++H +++ + D V L+DMYAKC G
Sbjct: 135 KHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAKC---G 190
Query: 198 SLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVL 257
+ + +VFN + NVV WT++IAGYV+ E E + LF M + NV N +T+ +++
Sbjct: 191 EIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCE-EGLVLFNRMRENNVLGNEYTYGTLI 249
Query: 258 KACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLV 317
AC L G+ H +K G+ +C+ SL++MY + G + AR+ F+ LV
Sbjct: 250 MACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLV 309
Query: 318 SCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALV 376
++ + + +E L+ + I T A +LSG I + G +H L
Sbjct: 310 MWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLS 369
Query: 377 VKSG-FETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKA 435
+K G ++TN++ NAL+ MY+KC A VF +++++ W SIISGF+++G +A
Sbjct: 370 IKVGIWDTNVA--NALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEA 427
Query: 436 LELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWK-HFNSMRHCHGVVPRVEHYACMV 494
L LF+ M V PN VT ++ SAC+ +G + G H S++ V ++
Sbjct: 428 LFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALL 487
Query: 495 DVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNT----ELGEHAAKMILEREP 550
D + G A +++ + + + W +++G G+T EL E K +++P
Sbjct: 488 DFYAKCGDPQSARLIFDTIE-EKNTITWSAMIGGYGKQGDTIGSLELFEEMLKK--QQKP 544
Query: 551 HDPATYILLS 560
++ +LS
Sbjct: 545 NESTFTSILS 554
Score = 178 bits (452), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 131/466 (28%), Positives = 228/466 (48%), Gaps = 26/466 (5%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
R++V W SM++ + N + E LV F M E+ NEY + + AC+ G+
Sbjct: 205 RNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWF 264
Query: 65 FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG 124
G ++K+G S V L+DM+VK CGDI +A RVF + ++V W M+ + G
Sbjct: 265 HGCLVKSGIELSSCLV-TSLLDMYVK-CGDISNARRVFNEHSHVDLVMWTAMIVGYTHNG 322
Query: 125 YPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGC 184
+++ LF +M P+ T+ S L+ C +E L +G+ +H I+ G+ D V
Sbjct: 323 SVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVAN 381
Query: 185 SLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQG 244
+LV MYAKC + D++ VF E ++V+W ++I+G+ + +G EA+ LF M
Sbjct: 382 ALVHMYAKCYQNR---DAKYVFEMESEKDIVAWNSIISGFSQ-NGSIHEALFLFHRMNSE 437
Query: 245 NVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNC--VANSLINMYARSGRLE 302
+V PNG T +S+ ACA+L G LH+ ++KLG A + V +L++ YA+ G +
Sbjct: 438 SVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQ 497
Query: 303 CARKCFDLLFEKSLVSCETIV-------DVIVRDLNSDETLNHETEHTTGIGACSFTYAC 355
AR FD + EK+ ++ ++ D I +E L + + T+
Sbjct: 498 SARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNES------TFTS 551
Query: 356 LLSGAACIGTIGKGEQIHALVVKS-GFETNLSINNALISMYSKCGNKEAALQVFNDMG-D 413
+LS G + +G++ + + K F + ++ M ++ G E AL + M
Sbjct: 552 ILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQ 611
Query: 414 RNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLS 459
+V + + + G H + +ML+ + P+D +Y ++S
Sbjct: 612 PDVRCFGAFLHGCGMHSRFDLGEIVIKKMLD--LHPDDASYYVLVS 655
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 144/317 (45%), Gaps = 40/317 (12%)
Query: 1 MGSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSV 60
M S++D+V+W S++S F+ N HEAL F M PN + AC++ +V
Sbjct: 402 MESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAV 461
Query: 61 GRVVFGSVLKTGYF-DSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTR 119
G + +K G+ S V VG L+D + K CGD +SA +F+ ++E+N +TW+ M+
Sbjct: 462 GSSLHAYSVKLGFLASSSVHVGTALLDFYAK-CGDPQSARLIFDTIEEKNTITWSAMIGG 520
Query: 120 FAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALD 179
+ + G S++LF ML P+ T TS L+AC +++ GK+ S
Sbjct: 521 YGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFS---------- 570
Query: 180 LCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFC 239
MY + +N P + +T ++ R +G+ ++A+ +
Sbjct: 571 --------SMY-------------KDYNFTP--STKHYTCMVDMLAR-AGELEQALDIIE 606
Query: 240 DMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSG 299
M + P+ F + L C F GE + + + L + + N+YA G
Sbjct: 607 KM---PIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYV-LVSNLYASDG 662
Query: 300 RLECARKCFDLLFEKSL 316
R A++ +L+ ++ L
Sbjct: 663 RWNQAKEVRNLMKQRGL 679
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 128/278 (46%), Gaps = 19/278 (6%)
Query: 256 VLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKS 315
+L C N+ Q H GL +A L+++Y G + AR FD + E
Sbjct: 50 LLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 316 LVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHA 374
+ ++ + S E + ++ G ++ L + + G++IH
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHC 166
Query: 375 LVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATK 434
+VK N+ + L+ MY+KCG ++A +VFND+ RNV+ WTS+I+G+ K+ +
Sbjct: 167 QLVKVPSFDNVVL-TGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEE 225
Query: 435 ALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPR--VEHYAC 492
L LF M E V N+ TY ++ AC+ + + +G K F HG + + +E +C
Sbjct: 226 GLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQG-KWF------HGCLVKSGIELSSC 278
Query: 493 MV----DVLGRSGLLSEAIEFINSMPLDADAMVWRSLL 526
+V D+ + G +S A N D ++W +++
Sbjct: 279 LVTSLLDMYVKCGDISNARRVFNEHS-HVDLVMWTAMI 315
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 99/219 (45%), Gaps = 21/219 (9%)
Query: 312 FEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQ 371
F VS TI ++I+ + N +L++ + C L + C I Q
Sbjct: 15 FPPRCVSFTTIKELILTEENDGSSLHYAA-----------SSPCFLLLSKCT-NIDSLRQ 62
Query: 372 IHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGY 431
H ++ +G ++SI L+S+Y G + A VF+ + + + W ++ + +
Sbjct: 63 SHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKE 122
Query: 432 ATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGV-VPRVEHY 490
+ + ++L+ +++ G + +D+ + L AC+ + +D G K HC V VP ++
Sbjct: 123 SVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKK-----IHCQLVKVPSFDNV 177
Query: 491 AC--MVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLG 527
++D+ + G + A + N + L + + W S++
Sbjct: 178 VLTGLLDMYAKCGEIKSAHKVFNDITL-RNVVCWTSMIA 215
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 227/639 (35%), Positives = 343/639 (53%), Gaps = 71/639 (11%)
Query: 150 SALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSM 209
S L +C L L+ Q+H I+ G+ D L+ ++ ++ +L +RR+
Sbjct: 10 SLLNSCKNLRALT---QIHGLFIKYGVDTDSYFTGKLI-LHCAISISDALPYARRLLLCF 65
Query: 210 PEHNVVSWTALIAGYVRGSGQEQEAMRLFCDML-QGNVAPNGFTFSSVLKACANLPDFGF 268
PE + + L+ GY S + ++ +F +M+ +G V P+ F+F+ V+KA N
Sbjct: 66 PEPDAFMFNTLVRGYSE-SDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRT 124
Query: 269 GEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLL----------------- 311
G Q+H Q +K GL + V +LI MY G +E ARK FD +
Sbjct: 125 GFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFR 184
Query: 312 ----------FEKSLVSCETIVDVIVR------DLNSDETLNHETEHT------------ 343
F+K LV T +V++ +L S + + E H
Sbjct: 185 GNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGI 244
Query: 344 ------------------TGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNL 385
G+ + +LS + G+ G+ +H V K+G+ +
Sbjct: 245 AHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIV 304
Query: 386 SINNALISMYSKCGNKEAALQVFNDMGD-RNVITWTSIISGFAKHGYATKALELFYEMLE 444
S+NNALI MYS+CGN A VF M + R +++WTS+I+G A HG +A+ LF EM
Sbjct: 305 SVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTA 364
Query: 445 TGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLS 504
GV P+ +++I++L ACSH GLI+EG +F+ M+ + + P +EHY CMVD+ GRSG L
Sbjct: 365 YGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQ 424
Query: 505 EAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYA 564
+A +FI MP+ A+VWR+LLG+C HGN EL E + + E +P++ +LLSN YA
Sbjct: 425 KAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYA 484
Query: 565 TEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELDELAS 624
T +W DVA+IRK+M ++I K +S +EV ++KF G+ + +++L E+
Sbjct: 485 TAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIIL 544
Query: 625 KIK-KLGYVPNTDFVLHDVEDEQKEQYLFQHSEKIAVAFALISIPNPKPIRIFKNLRVCG 683
++K + GY P L+DVE+E+KE + +HSEK+A+AFAL + IRI KNLR+C
Sbjct: 545 RLKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICR 604
Query: 684 DCHTAIKYISKVTGRVIVVRDANRFHHIKDGTCSCNDYW 722
DCH +K SKV G I+VRD NRFH KDG+CSC DYW
Sbjct: 605 DCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 147/278 (52%), Gaps = 23/278 (8%)
Query: 40 PNEYCFTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAH 99
PN + A + AC + R +F +L + +V ++ ++K G++ESA
Sbjct: 170 PNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNV-----MLAGYIKA-GELESAK 223
Query: 100 RVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELE 159
R+F +M R+ V+W+ M+ A G +S F + +G +P+ +LT L+AC++
Sbjct: 224 RIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSG 283
Query: 160 LLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHN-VVSWT 218
GK LH +V ++G + + V +L+DMY++C G++ +R VF M E +VSWT
Sbjct: 284 SFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRC---GNVPMARLVFEGMQEKRCIVSWT 340
Query: 219 ALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQT-- 276
++IAG GQ +EA+RLF +M V P+G +F S+L AC++ GE S+
Sbjct: 341 SMIAGLAM-HGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKR 399
Query: 277 ---IKLGLSAVNCVANSLINMYARSGRLECARKCFDLL 311
I+ + C ++++Y RSG+L+ K +D +
Sbjct: 400 VYHIEPEIEHYGC----MVDLYGRSGKLQ---KAYDFI 430
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 137/297 (46%), Gaps = 41/297 (13%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
RD VSW +M+ A+N +E+ + F ++ G PNE T L ACS S F G+++
Sbjct: 232 RDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKIL 291
Query: 65 FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQE-RNVVTWNLMMTRFAQM 123
G V K GY VSV LIDM+ + CG++ A VFE MQE R +V+W M+ A
Sbjct: 292 HGFVEKAGY-SWIVSVNNALIDMYSR-CGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMH 349
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVG 183
G E+++ LF M G TPD + S L AC+ L+ G+ S
Sbjct: 350 GQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFS-------------- 395
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQ 243
+ +RV++ PE + + ++ Y R SG+ Q+A C M
Sbjct: 396 -----------------EMKRVYHIEPE--IEHYGCMVDLYGR-SGKLQKAYDFICQM-- 433
Query: 244 GNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGR 300
+ P + ++L AC++ + EQ+ + +L + + L N YA +G+
Sbjct: 434 -PIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLV-LLSNAYATAGK 488
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/449 (23%), Positives = 187/449 (41%), Gaps = 78/449 (17%)
Query: 98 AHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYT-PDRFTLTSALTACA 156
A R+ E + +N ++ +++ P +S+ +F M+ G+ PD F+ + A
Sbjct: 58 ARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVE 117
Query: 157 ELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVS 216
L G Q+H ++ GL L VG +L+ MY C G + +R+VF+ M + N+V+
Sbjct: 118 NFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGC---GCVEFARKVFDEMHQPNLVA 174
Query: 217 WTALI-------------------------------AGYVRGSGQEQEAMRLFCDM---- 241
W A+I AGY++ +G+ + A R+F +M
Sbjct: 175 WNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIK-AGELESAKRIFSEMPHRD 233
Query: 242 ---------------------------LQGNVAPNGFTFSSVLKACANLPDFGFGEQLHS 274
+ ++PN + + VL AC+ F FG+ LH
Sbjct: 234 DVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHG 293
Query: 275 QTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKS-LVSCETIVDVIVRDLNSD 333
K G S + V N+LI+MY+R G + AR F+ + EK +VS +++ + +
Sbjct: 294 FVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGE 353
Query: 334 ETLNHETEHTT-GIGACSFTYACLLSGAACIGTIGKGEQIHALVVK-SGFETNLSINNAL 391
E + E T G+ ++ LL + G I +GE + + + E + +
Sbjct: 354 EAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCM 413
Query: 392 ISMYSKCGNKEAALQVFNDMG-DRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPN 450
+ +Y + G + A M I W +++ + HG A ++ + E + PN
Sbjct: 414 VDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNE--LDPN 471
Query: 451 DVTYIAVLS-ACSHVGLIDEGWKHFNSMR 478
+ + +LS A + G WK S+R
Sbjct: 472 NSGDLVLLSNAYATAG----KWKDVASIR 496
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/545 (37%), Positives = 322/545 (59%), Gaps = 21/545 (3%)
Query: 192 KCAVD--GSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAP- 248
+CA+ G L + ++F +P+ W A+I G+ GS A + MLQ + +
Sbjct: 44 RCAISPFGDLSFAVQIFRYIPKPLTNDWNAIIRGFA-GSSHPSLAFSWYRSMLQQSSSSS 102
Query: 249 -----NGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLEC 303
+ T S LKACA +QLH Q + GLSA + + +L++ Y+++G L
Sbjct: 103 AICRVDALTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLIS 162
Query: 304 ARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGAAC 362
A K FD + + + S ++ +V + E + ++ T GI T L +
Sbjct: 163 AYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSH 222
Query: 363 IGTIGKGEQIHALVVKSGFET-NLSINNALISMYSKCGNKEAALQVFNDM-GDRNVITWT 420
+G + +GE I G+ N+ ++NA I MYSKCG + A QVF G ++V+TW
Sbjct: 223 LGDVKEGENIF-----HGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWN 277
Query: 421 SIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHC 480
++I+GFA HG A +ALE+F ++ + G+KP+DV+Y+A L+AC H GL++ G FN+M C
Sbjct: 278 TMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMA-C 336
Query: 481 HGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEH 540
GV ++HY C+VD+L R+G L EA + I SM + D ++W+SLLG+ ++ + E+ E
Sbjct: 337 KGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEI 396
Query: 541 AAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVH 600
A++ I E ++ ++LLSN+YA + RW DV +R M+ K++ K G S+IE + +H
Sbjct: 397 ASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIH 456
Query: 601 KFHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTDFVLHDVEDEQKEQYLFQHSEKIAV 660
+F+ D SH Q ++IY+++DE+ KI++ GYV T VLHD+ +E+KE L HSEK+AV
Sbjct: 457 EFYNSDKSHEQWREIYEKIDEIRFKIREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAV 516
Query: 661 AFALISIPNP---KPIRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGTCS 717
A+ L+ + P+R+ NLR+CGDCH K+ISK+ R I+VRD RFH KDG+CS
Sbjct: 517 AYGLMMMDGADEESPVRVINNLRICGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCS 576
Query: 718 CNDYW 722
C D+W
Sbjct: 577 CRDFW 581
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 107/431 (24%), Positives = 183/431 (42%), Gaps = 24/431 (5%)
Query: 58 FSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMM 117
FS + + L G+F S L + GD+ A ++F + + WN ++
Sbjct: 16 FSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPLTNDWNAII 75
Query: 118 TRFAQMGYPEDSIDLFFRMLLSGYTP------DRFTLTSALTACAELELLSVGKQLHSWV 171
FA +P + + ML + D T + L ACA S QLH +
Sbjct: 76 RGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQLHCQI 135
Query: 172 IRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQE 231
R GL+ D + +L+D Y+K +G L+ + ++F+ MP +V SW ALIAG V G+ +
Sbjct: 136 NRRGLSADSLLCTTLLDAYSK---NGDLISAYKLFDEMPVRDVASWNALIAGLVSGN-RA 191
Query: 232 QEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNC-VANS 290
EAM L+ M + + T + L AC++L D GE + G S N V+N+
Sbjct: 192 SEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFH-----GYSNDNVIVSNA 246
Query: 291 LINMYARSGRLECARKCFDLLF-EKSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGA 348
I+MY++ G ++ A + F+ +KS+V+ T++ + L + GI
Sbjct: 247 AIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKP 306
Query: 349 CSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVF 408
+Y L+ G + G + + G E N+ ++ + S+ G A +
Sbjct: 307 DDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDII 366
Query: 409 NDMG-DRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLI 467
M + + W S++ + A E+ E GV ND ++ + S+V
Sbjct: 367 CSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVN-NDGDFVLL----SNVYAA 421
Query: 468 DEGWKHFNSMR 478
WK +R
Sbjct: 422 QGRWKDVGRVR 432
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 116/222 (52%), Gaps = 13/222 (5%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
RD+ SW ++++ + + EA+ + M G +E AAL ACS+ +G V
Sbjct: 173 RDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSH-----LGDVK 227
Query: 65 FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQ-ERNVVTWNLMMTRFAQM 123
G + GY + +V V IDM+ K CG ++ A++VFE+ +++VVTWN M+T FA
Sbjct: 228 EGENIFHGYSNDNVIVSNAAIDMYSK-CGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVH 286
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLC-V 182
G ++++F ++ +G PD + +ALTAC L+ G + + + G+ ++
Sbjct: 287 GEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHY 346
Query: 183 GCSLVDMYAKCAVDGSLVDSRRVFNSMPE-HNVVSWTALIAG 223
GC +VD+ ++ G L ++ + SM + V W +L+
Sbjct: 347 GC-VVDLLSRA---GRLREAHDIICSMSMIPDPVLWQSLLGA 384
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 153/321 (47%), Gaps = 32/321 (9%)
Query: 10 WCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAAL------RACSNSLYFSVGRV 63
W +++ FA +S A + ML+ + C AL +AC+ +L S
Sbjct: 71 WNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQ 130
Query: 64 VFGSVLKTGYFDSHVSVGCE-LIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
+ + + G S S+ C L+D + K GD+ SA+++F++M R+V +WN ++
Sbjct: 131 LHCQINRRGL--SADSLLCTTLLDAYSKN-GDLISAYKLFDEMPVRDVASWNALIAGLVS 187
Query: 123 MGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALD-LC 181
++++L+ RM G T+ +AL AC+ L + G+ I G + D +
Sbjct: 188 GNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGEN-----IFHGYSNDNVI 242
Query: 182 VGCSLVDMYAKCAVDGSLVDSRRVFNSMP-EHNVVSWTALIAGYVRGSGQEQEAMRLFCD 240
V + +DMY+KC G + + +VF + +VV+W +I G+ G+ A+ +F
Sbjct: 243 VSNAAIDMYSKC---GFVDKAYQVFEQFTGKKSVVTWNTMITGFAV-HGEAHRALEIFDK 298
Query: 241 MLQGNVAPNGFTFSSVLKAC--ANLPDFGFG--EQLHSQTIKLGLSAVNCVANSLINMYA 296
+ + P+ ++ + L AC A L ++G + + ++ + CV +++ +
Sbjct: 299 LEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCV----VDLLS 354
Query: 297 RSGRLECARKCFDLLFEKSLV 317
R+GRL R+ D++ S++
Sbjct: 355 RAGRL---REAHDIICSMSMI 372
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/569 (33%), Positives = 328/569 (57%), Gaps = 7/569 (1%)
Query: 77 HVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRM 136
H+ ++ F KG +E A +F++M +R+VV W M+T +A Y + + F M
Sbjct: 45 HILATNLIVSYFEKGL--VEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEM 102
Query: 137 LLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVD 196
+ G +P+ FTL+S L +C +++L+ G +H V++ G+ L V ++++MYA C+V
Sbjct: 103 VKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSV- 161
Query: 197 GSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSV 256
++ + +F + N V+WT LI G+ G ++++ ML N + +
Sbjct: 162 -TMEAACLIFRDIKVKNDVTWTTLITGFTH-LGDGIGGLKMYKQMLLENAEVTPYCITIA 219
Query: 257 LKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSL 316
++A A++ G+Q+H+ IK G + V NS++++Y R G L A+ F + +K L
Sbjct: 220 VRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDL 279
Query: 317 VSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALV 376
++ T++ + R +S+ L + + G +T+ L++ A I + G+Q+H +
Sbjct: 280 ITWNTLISELERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRI 339
Query: 377 VKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDR-NVITWTSIISGFAKHGYATKA 435
+ GF N+ + NALI MY+KCGN + +VF ++ DR N+++WTS++ G+ HGY +A
Sbjct: 340 FRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEA 399
Query: 436 LELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVD 495
+ELF +M+ +G++P+ + ++AVLSAC H GL+++G K+FN M +G+ P + Y C+VD
Sbjct: 400 VELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVD 459
Query: 496 VLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHG-NTELGEHAAKMILEREPHDPA 554
+LGR+G + EA E + MP D W ++LG+C+ H N + AA+ ++E +P
Sbjct: 460 LLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVG 519
Query: 555 TYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQK 614
TY++LS +YA E +W D A +RK M+ KEAG SWI VENQV F V D P A
Sbjct: 520 TYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASS 579
Query: 615 IYDELDELASKIKKLGYVPNTDFVLHDVE 643
+Y L L + ++ GYVP D +++D E
Sbjct: 580 VYSVLGLLIEETREAGYVPELDSLVNDQE 608
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 127/474 (26%), Positives = 236/474 (49%), Gaps = 56/474 (11%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
RD+V+W +M++ +A+++ A F +M++ G PNE+ ++ L++C N + G +V
Sbjct: 74 RDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALV 133
Query: 65 FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG 124
G V+K G + + V +++M+ +E+A +F ++ +N VTW ++T F +G
Sbjct: 134 HGVVVKLG-MEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLG 192
Query: 125 YPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGC 184
+ ++ +MLL + +T A+ A A ++ ++ GKQ+H+ VI+ G +L V
Sbjct: 193 DGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMN 252
Query: 185 SLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQG 244
S++D+Y +C G L +++ F+ M + ++++W LI+ R EA+ +F
Sbjct: 253 SILDLYCRC---GYLSEAKHYFHEMEDKDLITWNTLISELER--SDSSEALLMFQRFESQ 307
Query: 245 NVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECA 304
PN +TF+S++ ACAN+ G+QLH + + G + +AN+LI+MYA+ G + +
Sbjct: 308 GFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDS 367
Query: 305 RKCF-DLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGAACI 363
++ F +++ ++LVS +++ IG S Y GA +
Sbjct: 368 QRVFGEIVDRRNLVSWTSMM----------------------IGYGSHGY-----GAEAV 400
Query: 364 GTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDM-------GDRNV 416
K +V SG + + A++S G E L+ FN M DR++
Sbjct: 401 ELFDK-------MVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDI 453
Query: 417 ITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSAC---SHVGLI 467
+ ++ + G +A EL M KP++ T+ A+L AC H GLI
Sbjct: 454 --YNCVVDLLGRAGKIGEAYELVERM---PFKPDESTWGAILGACKAHKHNGLI 502
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 374 bits (960), Expect = e-103, Method: Compositional matrix adjust.
Identities = 219/632 (34%), Positives = 358/632 (56%), Gaps = 12/632 (1%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
KRD VSW +M+S + + +A F M G + Y F+ L+ ++ F +G
Sbjct: 63 KRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQ 122
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
V G V+K GY + +V VG L+DM+ K C +E A F+++ E N V+WN ++ F Q+
Sbjct: 123 VHGLVIKGGY-ECNVYVGSSLVDMYAK-CERVEDAFEAFKEISEPNSVSWNALIAGFVQV 180
Query: 124 GYPEDSIDLFFRM-LLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCV 182
+ + L M + + T D T LT + ++ KQ+H+ V++ GL ++ +
Sbjct: 181 RDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITI 240
Query: 183 GCSLVDMYAKCAVDGSLVDSRRVFNSMP-EHNVVSWTALIAGYVRGSGQEQEAMRLFCDM 241
+++ YA C GS+ D++RVF+ + +++SW ++IAG+ + +E A LF M
Sbjct: 241 CNAMISSYADC---GSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKES-AFELFIQM 296
Query: 242 LQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYAR--SG 299
+ V + +T++ +L AC+ FG+ LH IK GL V N+LI+MY + +G
Sbjct: 297 QRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTG 356
Query: 300 RLECARKCFDLLFEKSLVSCETIVDVIV-RDLNSDETLNHETEHTTGIGACSFTYACLLS 358
+E A F+ L K L+S +I+ + L+ D ++ I + ++ LL
Sbjct: 357 TMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLR 416
Query: 359 GAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDR-NVI 417
+ + T+ G+QIHAL KSGF +N + ++LI MYSKCG E+A + F + + + +
Sbjct: 417 SCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTV 476
Query: 418 TWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSM 477
W ++I G+A+HG +L+LF +M VK + VT+ A+L+ACSH GLI EG + N M
Sbjct: 477 AWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLM 536
Query: 478 RHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTEL 537
+ + PR+EHYA VD+LGR+GL+++A E I SMPL+ D MV ++ LG CR G E+
Sbjct: 537 EPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEM 596
Query: 538 GEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVEN 597
A +LE EP D TY+ LS++Y+ ++W + A+++K MK++ + K G+SWIE+ N
Sbjct: 597 ATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRN 656
Query: 598 QVHKFHVGDTSHPQAQKIYDELDELASKIKKL 629
QV F+ D S+P Q IY + +L +++ L
Sbjct: 657 QVKAFNAEDRSNPLCQDIYMMIKDLTQEMQWL 688
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 131/466 (28%), Positives = 234/466 (50%), Gaps = 17/466 (3%)
Query: 76 SHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFR 135
S + V ++D ++K G + A+ +F++M +R+ V+WN M++ + G ED+ LF
Sbjct: 33 SDIYVSNRILDSYIK-FGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTC 91
Query: 136 MLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAV 195
M SG D ++ + L A ++ +G+Q+H VI+ G ++ VG SLVDMYAKC
Sbjct: 92 MKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCE- 150
Query: 196 DGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSS 255
+ D+ F + E N VSW ALIAG+V+ + L ++ V + TF+
Sbjct: 151 --RVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAP 208
Query: 256 VLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFD-LLFEK 314
+L + +Q+H++ +KLGL + N++I+ YA G + A++ FD L K
Sbjct: 209 LLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSK 268
Query: 315 SLVSCETIVDVIVR---DLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGK--G 369
L+S +++ + ++ E H +TY LLS AC G + G
Sbjct: 269 DLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDI--YTYTGLLS--ACSGEEHQIFG 324
Query: 370 EQIHALVVKSGFETNLSINNALISMYSK--CGNKEAALQVFNDMGDRNVITWTSIISGFA 427
+ +H +V+K G E S NALISMY + G E AL +F + +++I+W SII+GFA
Sbjct: 325 KSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFA 384
Query: 428 KHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRV 487
+ G + A++ F + + +K +D + A+L +CS + + G + +++ G V
Sbjct: 385 QKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLG-QQIHALATKSGFVSNE 443
Query: 488 EHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHG 533
+ ++ + + G++ A + + + W +++ HG
Sbjct: 444 FVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHG 489
Score = 150 bits (380), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 166/320 (51%), Gaps = 22/320 (6%)
Query: 1 MGSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSV 60
+G +DL+SW SM++ F+ + ++ A F+ M H + Y +T L ACS +
Sbjct: 264 LGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIF 323
Query: 61 GRVVFGSVLKTGYFDSHVSVGCELIDMFVK-GCGDIESAHRVFEKMQERNVVTWNLMMTR 119
G+ + G V+K G + S LI M+++ G +E A +FE ++ +++++WN ++T
Sbjct: 324 GKSLHGMVIKKG-LEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITG 382
Query: 120 FAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALD 179
FAQ G ED++ F + S D + ++ L +C++L L +G+Q+H+ +SG +
Sbjct: 383 FAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSN 442
Query: 180 LCVGCSLVDMYAKCAVDGSLVDSRRVFNSM-PEHNVVSWTALIAGYVRGSGQEQEAMRLF 238
V SL+ MY+KC G + +R+ F + +H+ V+W A+I GY + G Q ++ LF
Sbjct: 443 EFVISSLIVMYSKC---GIIESARKCFQQISSKHSTVAWNAMILGYAQ-HGLGQVSLDLF 498
Query: 239 CDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARS 298
M NV + TF+++L AC+ H+ I+ GL +N + +Y
Sbjct: 499 SQMCNQNVKLDHVTFTAILTACS-----------HTGLIQEGLELLNLME----PVYKIQ 543
Query: 299 GRLECARKCFDLLFEKSLVS 318
R+E DLL LV+
Sbjct: 544 PRMEHYAAAVDLLGRAGLVN 563
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 139/307 (45%), Gaps = 22/307 (7%)
Query: 273 HSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVR-DLN 331
H IK G + V+N +++ Y + G L A FD + ++ VS T++
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 332 SDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNAL 391
D +G ++++ LL G A + GEQ+H LV+K G+E N+ + ++L
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 392 ISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEM-LETGVKPN 450
+ MY+KC E A + F ++ + N ++W ++I+GF + A L M ++ V +
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMD 202
Query: 451 DVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRV----EHYAC--MVDVLGRSGLLS 504
T+ +L+ L+D+ N ++ H V ++ E C M+ G +S
Sbjct: 203 AGTFAPLLT------LLDDP-MFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVS 255
Query: 505 EAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPH----DPATYILLS 560
+A + + D + W S++ H EL E A ++ ++ + H D TY L
Sbjct: 256 DAKRVFDGLGGSKDLISWNSMIAGFSKH---ELKESAFELFIQMQRHWVETDIYTYTGLL 312
Query: 561 NLYATEE 567
+ + EE
Sbjct: 313 SACSGEE 319
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 373 bits (957), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/620 (34%), Positives = 350/620 (56%), Gaps = 15/620 (2%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGF-YPNEYCFTAALRACSNSLYFSVGR 62
+ D+ W S+MS ++ NSM H+ L F +L P+ + F ++A +GR
Sbjct: 68 RSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGR 127
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
++ V+K+GY V V L+ M+ K E++ +VF++M ER+V +WN +++ F Q
Sbjct: 128 MIHTLVVKSGYV-CDVVVASSLVGMYAK-FNLFENSLQVFDEMPERDVASWNTVISCFYQ 185
Query: 123 MGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCV 182
G E +++LF RM SG+ P+ +LT A++AC+ L L GK++H ++ G LD V
Sbjct: 186 SGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYV 245
Query: 183 GCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDML 242
+LVDMY KC L +R VF MP ++V+W ++I GYV G + + + M+
Sbjct: 246 NSALVDMYGKC---DCLEVAREVFQKMPRKSLVAWNSMIKGYV-AKGDSKSCVEILNRMI 301
Query: 243 QGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSA---VNCVANSLINMYARSG 299
P+ T +S+L AC+ + G+ +H I+ ++A VNC SLI++Y + G
Sbjct: 302 IEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNC---SLIDLYFKCG 358
Query: 300 RLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLS 358
A F + S ++ + N + + ++ + G+ T+ +L
Sbjct: 359 EANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLP 418
Query: 359 GAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVIT 418
+ + + KG+QIH + +S ET+ + +AL+ MYSKCGN++ A ++FN + ++V++
Sbjct: 419 ACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVS 478
Query: 419 WTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMR 478
WT +IS + HG +AL F EM + G+KP+ VT +AVLSAC H GLIDEG K F+ MR
Sbjct: 479 WTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMR 538
Query: 479 HCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDAD-AMVWRSLLGSCRVHGNTEL 537
+G+ P +EHY+CM+D+LGR+G L EA E I P +D A + +L +C +H L
Sbjct: 539 SKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSL 598
Query: 538 GEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVEN 597
G+ A++++E P D +TY++L NLYA+ E W +R MK+ + K+ G SWIE+ +
Sbjct: 599 GDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSD 658
Query: 598 QVHKFHVGDTSHPQAQKIYD 617
+V F D SH +A+ +Y+
Sbjct: 659 KVCHFFAEDRSHLRAENVYE 678
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 154/318 (48%), Gaps = 19/318 (5%)
Query: 255 SVLKACAN-LPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFE 313
S+L+ C N + +H + + LGL + SLIN+Y AR F+
Sbjct: 8 SLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDI 67
Query: 314 KSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGAC------SFTYACLLSGAACIGTIG 367
+S V I + ++ + + + E + C SFT+ ++ +G
Sbjct: 68 RSDV---YIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREF 124
Query: 368 KGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFA 427
G IH LVVKSG+ ++ + ++L+ MY+K E +LQVF++M +R+V +W ++IS F
Sbjct: 125 LGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFY 184
Query: 428 KHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRV 487
+ G A KALELF M +G +PN V+ +SACS + ++ G K + R C +
Sbjct: 185 QSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERG-KEIH--RKCVKKGFEL 241
Query: 488 EHY--ACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTE-LGEHAAKM 544
+ Y + +VD+ G+ L A E MP + + W S++ G+++ E +M
Sbjct: 242 DEYVNSALVDMYGKCDCLEVAREVFQKMPRKS-LVAWNSMIKGYVAKGDSKSCVEILNRM 300
Query: 545 ILE--REPHDPATYILLS 560
I+E R T IL++
Sbjct: 301 IIEGTRPSQTTLTSILMA 318
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 373 bits (957), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/626 (33%), Positives = 351/626 (56%), Gaps = 7/626 (1%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
K D V W S++S ++ + E L F +M G PN Y +AL AC Y +G+
Sbjct: 246 KGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKE 305
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
+ SVLK+ S + V LI M+ + CG + A R+ +M +VVTWN ++ + Q
Sbjct: 306 IHASVLKSSTHSSELYVCNALIAMYTR-CGKMPQAERILRQMNNADVVTWNSLIKGYVQN 364
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVG 183
+++++ F M+ +G+ D ++TS + A L L G +LH++VI+ G +L VG
Sbjct: 365 LMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVG 424
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQ 243
+L+DMY+KC + + R F M + +++SWT +IAGY + EA+ LF D+ +
Sbjct: 425 NTLIDMYSKCNLTCYM---GRAFLRMHDKDLISWTTVIAGYAQNDCH-VEALELFRDVAK 480
Query: 244 GNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLEC 303
+ + S+L+A + L +++H ++ GL + N L+++Y + +
Sbjct: 481 KRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDT-VIQNELVDVYGKCRNMGY 539
Query: 304 ARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGAAC 362
A + F+ + K +VS +++ + N E + TG+ A S C+LS AA
Sbjct: 540 ATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAAS 599
Query: 363 IGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSI 422
+ + KG +IH +++ GF SI A++ MY+ CG+ ++A VF+ + + ++ +TS+
Sbjct: 600 LSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSM 659
Query: 423 ISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHG 482
I+ + HG A+ELF +M V P+ ++++A+L ACSH GL+DEG M H +
Sbjct: 660 INAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYE 719
Query: 483 VVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAA 542
+ P EHY C+VD+LGR+ + EA EF+ M + A VW +LL +CR H E+GE AA
Sbjct: 720 LEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAA 779
Query: 543 KMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKF 602
+ +LE EP +P +L+SN++A + RW DV +R MK + K G SWIE++ +VHKF
Sbjct: 780 QRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKF 839
Query: 603 HVGDTSHPQAQKIYDELDELASKIKK 628
D SHP++++IY++L E+ K+++
Sbjct: 840 TARDKSHPESKEIYEKLSEVTRKLER 865
Score = 186 bits (471), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 135/501 (26%), Positives = 248/501 (49%), Gaps = 27/501 (5%)
Query: 45 FTAALRACSNSLYFSVGRVVFGSVLKT-GYFDSHVSVGCELIDMFVKGCGDIESAHRVFE 103
F L C S GR + + KT F+ G +L+ M+ K CG ++ A +VF+
Sbjct: 83 FAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAG-KLVFMYGK-CGSLDDAEKVFD 140
Query: 104 KMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSV 163
+M +R WN M+ + G P ++ L++ M + G + + L ACA+L +
Sbjct: 141 EMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRS 200
Query: 164 GKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH-NVVSWTALIA 222
G +LHS +++ G + +LV MYAK + L +RR+F+ E + V W ++++
Sbjct: 201 GSELHSLLVKLGYHSTGFIVNALVSMYAK---NDDLSAARRLFDGFQEKGDAVLWNSILS 257
Query: 223 GYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLS 282
Y SG+ E + LF +M APN +T S L AC G+++H+ +K
Sbjct: 258 SY-STSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTH 316
Query: 283 AVNC-VANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETE 341
+ V N+LI MY R G++ A + + +V+ +++ V++L E L ++
Sbjct: 317 SSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSD 376
Query: 342 H-TTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGN 400
G + + +++ + + + G ++HA V+K G+++NL + N LI MYSKC
Sbjct: 377 MIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNL 436
Query: 401 KEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSA 460
+ F M D+++I+WT++I+G+A++ +ALELF ++ + ++ +++ ++L A
Sbjct: 437 TCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRA 496
Query: 461 CSHVG---LIDEGWKHFNSMRHCH----GVVPRVEHYACMVDVLGRSGLLSEAIEFINSM 513
S + ++ E HCH G++ V +VDV G+ + A S+
Sbjct: 497 SSVLKSMLIVKE--------IHCHILRKGLLDTVIQNE-LVDVYGKCRNMGYATRVFESI 547
Query: 514 PLDADAMVWRSLLGSCRVHGN 534
D + W S++ S ++GN
Sbjct: 548 K-GKDVVSWTSMISSSALNGN 567
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 371 bits (953), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/592 (34%), Positives = 331/592 (55%), Gaps = 12/592 (2%)
Query: 138 LSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDG 197
+S + D L+ +++ +L L +Q+H+ ++R+ L + V + A +
Sbjct: 5 ISSSSGDDHLLSLIVSSTGKLHL----RQIHALLLRTSLIRNSDVFHHFLSRLALSLIPR 60
Query: 198 SLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAP-NGFTFSSV 256
+ S RVF+ + +I + S E RLF + + + P N + S
Sbjct: 61 DINYSCRVFSQRLNPTLSHCNTMIRAFSL-SQTPCEGFRLFRSLRRNSSLPANPLSSSFA 119
Query: 257 LKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSL 316
LK C D G Q+H + G + + + +L+++Y+ A K FD + ++
Sbjct: 120 LKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDT 179
Query: 317 VSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFT--YACLLSGAAC--IGTIGKGEQI 372
VS + +R+ + + L + + C CLL+ AC +G + G+Q+
Sbjct: 180 VSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQV 239
Query: 373 HALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYA 432
H + ++G L+++N L+SMYS+CG+ + A QVF M +RNV++WT++ISG A +G+
Sbjct: 240 HDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFG 299
Query: 433 TKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCH-GVVPRVEHYA 491
+A+E F EML+ G+ P + T +LSACSH GL+ EG F+ MR + P + HY
Sbjct: 300 KEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYG 359
Query: 492 CMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPH 551
C+VD+LGR+ LL +A I SM + D+ +WR+LLG+CRVHG+ ELGE ++E +
Sbjct: 360 CVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAE 419
Query: 552 DPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQ 611
+ Y+LL N Y+T +W V +R MK+K+I + G S IE++ VH+F V D SHP+
Sbjct: 420 EAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPR 479
Query: 612 AQKIYDELDELASKIKKLGYVPNTDFVLHDVEDEQKEQYLFQ-HSEKIAVAFALISIPNP 670
++IY L E+ ++K GYV LH++E E+++ Y + HSEK+A+AF ++ P
Sbjct: 480 KEEIYKMLAEINQQLKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPG 539
Query: 671 KPIRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGTCSCNDYW 722
IR+ KNLR C DCH K++S V R+++VRD +RFHH K G+CSCND+W
Sbjct: 540 TTIRVTKNLRTCVDCHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
Score = 109 bits (272), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 132/255 (51%), Gaps = 10/255 (3%)
Query: 12 SMMSCFANNSMEHEALVTFLDMLEHGFYP-NEYCFTAALRACSNSLYFSVGRVVFGSVLK 70
+M+ F+ + E F + + P N + AL+ C S G + G +
Sbjct: 82 TMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFS 141
Query: 71 TGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSI 130
G+ + + L+D++ C + A +VF+++ +R+ V+WN++ + + + D +
Sbjct: 142 DGFLSDSL-LMTTLMDLY-STCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVL 199
Query: 131 DLFFRM---LLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLV 187
LF +M + PD T AL ACA L L GKQ+H ++ +GL+ L + +LV
Sbjct: 200 VLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLV 259
Query: 188 DMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVA 247
MY++C GS+ + +VF M E NVVSWTALI+G +G +EA+ F +ML+ ++
Sbjct: 260 SMYSRC---GSMDKAYQVFYGMRERNVVSWTALISGLAM-NGFGKEAIEAFNEMLKFGIS 315
Query: 248 PNGFTFSSVLKACAN 262
P T + +L AC++
Sbjct: 316 PEEQTLTGLLSACSH 330
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 89/164 (54%), Gaps = 5/164 (3%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDM---LEHGFYPNEYCFTAALRACSNSLYFSV 60
KRD VSW + SC+ N + LV F M ++ P+ AL+AC+N
Sbjct: 176 KRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDF 235
Query: 61 GRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRF 120
G+ V + + G +++ L+ M+ + CG ++ A++VF M+ERNVV+W +++
Sbjct: 236 GKQVHDFIDENG-LSGALNLSNTLVSMYSR-CGSMDKAYQVFYGMRERNVVSWTALISGL 293
Query: 121 AQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVG 164
A G+ +++I+ F ML G +P+ TLT L+AC+ L++ G
Sbjct: 294 AMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEG 337
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/632 (33%), Positives = 349/632 (55%), Gaps = 13/632 (2%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR 62
+KR L W +++ + E L F M P+ + AL+AC + G
Sbjct: 21 TKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGE 80
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
++ G V K S + VG LI M++K CG + A R+F+++++ ++VTW+ M++ F +
Sbjct: 81 MIHGFVKKDVTLGSDLYVGSSLIYMYIK-CGRMIEALRMFDELEKPDIVTWSSMVSGFEK 139
Query: 123 MGYPEDSIDLFFRMLL-SGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLC 181
G P +++ F RM++ S TPDR TL + ++AC +L +G+ +H +VIR G + DL
Sbjct: 140 NGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLS 199
Query: 182 VGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDM 241
+ SL++ YAK + ++ +F + E +V+SW+ +IA YV+ +G EA+ +F DM
Sbjct: 200 LVNSLLNCYAKSR---AFKEAVNLFKMIAEKDVISWSTVIACYVQ-NGAAAEALLVFNDM 255
Query: 242 LQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRL 301
+ PN T VL+ACA D G + H I+ GL V+ +L++MY +
Sbjct: 256 MDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSP 315
Query: 302 ECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHET----EHTTGIGACSFTYACLL 357
E A F + K +VS ++ + + ++ + E+ T A +L
Sbjct: 316 EEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDA--ILMVKVL 373
Query: 358 SGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVI 417
+ +G + + + H+ V+K GF++N I +L+ +YS+CG+ A +VFN + ++ +
Sbjct: 374 GSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTV 433
Query: 418 TWTSIISGFAKHGYATKALELFYEMLETG-VKPNDVTYIAVLSACSHVGLIDEGWKHFNS 476
WTS+I+G+ HG TKALE F M+++ VKPN+VT++++LSACSH GLI EG + F
Sbjct: 434 VWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKL 493
Query: 477 MRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTE 536
M + + + P +EHYA +VD+LGR G L AIE MP + +LLG+CR+H N E
Sbjct: 494 MVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGE 553
Query: 537 LGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVE 596
+ E AK + E E + Y+L+SN+Y + W +V +R ++KQ+ I K S IE+
Sbjct: 554 MAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIR 613
Query: 597 NQVHKFHVGDTSHPQAQKIYDELDELASKIKK 628
+VH+F D HP+ + +Y L EL +K+
Sbjct: 614 RKVHRFVADDELHPEKEPVYGLLKELDLHMKE 645
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 131/443 (29%), Positives = 236/443 (53%), Gaps = 14/443 (3%)
Query: 98 AHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAE 157
A ++F +M +R++ WN ++ ++ E+ + F M PD FTL AL AC E
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 158 LELLSVGKQLHSWVIRS-GLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVS 216
L ++ G+ +H +V + L DL VG SL+ MY KC G ++++ R+F+ + + ++V+
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKC---GRMIEALRMFDELEKPDIVT 129
Query: 217 WTALIAGYVRGSGQEQEAMRLFCDM-LQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQ 275
W+++++G+ + +G +A+ F M + +V P+ T +++ AC L + G +H
Sbjct: 130 WSSMVSGFEK-NGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGF 188
Query: 276 TIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDET 335
I+ G S + NSL+N YA+S + A F ++ EK ++S T++ V++ + E
Sbjct: 189 VIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEA 248
Query: 336 L---NHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALI 392
L N + T T C+L A + +G + H L ++ G ET + ++ AL+
Sbjct: 249 LLVFNDMMDDGTEPNVA--TVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALV 306
Query: 393 SMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEM-LETGVKPND 451
MY KC + E A VF+ + ++V++W ++ISGF +G A +++E F M LE +P+
Sbjct: 307 DMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDA 366
Query: 452 VTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFIN 511
+ + VL +CS +G +++ K F+S +G A +V++ R G L A + N
Sbjct: 367 ILMVKVLGSCSELGFLEQA-KCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFN 425
Query: 512 SMPLDADAMVWRSLLGSCRVHGN 534
+ L D +VW SL+ +HG
Sbjct: 426 GIALK-DTVVWTSLITGYGIHGK 447
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 100/319 (31%), Positives = 164/319 (51%), Gaps = 33/319 (10%)
Query: 1 MGSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSV 60
M +++D++SW ++++C+ N EAL+ F DM++ G PN L+AC+ +
Sbjct: 223 MIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQ 282
Query: 61 GRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRF 120
GR ++ G ++ V V L+DM++K C E A+ VF ++ ++VV+W +++ F
Sbjct: 283 GRKTHELAIRKG-LETEVKVSTALVDMYMK-CFSPEEAYAVFSRIPRKDVVSWVALISGF 340
Query: 121 AQMGYPEDSIDLFFRMLLSGYT-PDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALD 179
G SI+ F MLL T PD + L +C+EL L K HS+VI+ G +
Sbjct: 341 TLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSN 400
Query: 180 LCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGY-VRGSGQEQEAMRLF 238
+G SLV++Y++C GSL ++ +VFN + + V WT+LI GY + G G +A+ F
Sbjct: 401 PFIGASLVELYSRC---GSLGNASKVFNGIALKDTVVWTSLITGYGIHGKG--TKALETF 455
Query: 239 CDMLQGN-VAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANS------- 290
M++ + V PN TF S+L AC+ H+ I GL + N
Sbjct: 456 NHMVKSSEVKPNEVTFLSILSACS-----------HAGLIHEGLRIFKLMVNDYRLAPNL 504
Query: 291 -----LINMYARSGRLECA 304
L+++ R G L+ A
Sbjct: 505 EHYAVLVDLLGRVGDLDTA 523
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 182/371 (49%), Gaps = 9/371 (2%)
Query: 193 CAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFT 252
C S VD+R++F M + ++ W L+ R Q +E + F M + P+ FT
Sbjct: 4 CRKFSSSVDARQMFGEMTKRSLYQWNTLLKSLSR-EKQWEEVLYHFSHMFRDEEKPDNFT 62
Query: 253 FSSVLKACANLPDFGFGEQLHSQTIK-LGLSAVNCVANSLINMYARSGRLECARKCFDLL 311
LKAC L + +GE +H K + L + V +SLI MY + GR+ A + FD L
Sbjct: 63 LPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDEL 122
Query: 312 FEKSLVSCETIVDVIVRDLNSDETLN--HETEHTTGIGACSFTYACLLSGAACIGTIGKG 369
+ +V+ ++V ++ + + + + + T L+S + G
Sbjct: 123 EKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLG 182
Query: 370 EQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKH 429
+H V++ GF +LS+ N+L++ Y+K + A+ +F + +++VI+W+++I+ + ++
Sbjct: 183 RCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQN 242
Query: 430 GYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWK-HFNSMRHCHGVVPRVE 488
G A +AL +F +M++ G +PN T + VL AC+ +++G K H ++R G+ V+
Sbjct: 243 GAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIR--KGLETEVK 300
Query: 489 HYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELG-EHAAKMILE 547
+VD+ + EA + +P D + W +L+ ++G E + M+LE
Sbjct: 301 VSTALVDMYMKCFSPEEAYAVFSRIP-RKDVVSWVALISGFTLNGMAHRSIEEFSIMLLE 359
Query: 548 REPHDPATYIL 558
A ++
Sbjct: 360 NNTRPDAILMV 370
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 365 bits (937), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/547 (36%), Positives = 305/547 (55%), Gaps = 41/547 (7%)
Query: 217 WTALIAGYVR--GSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHS 274
W +I V S Q + ++ M V+P+ TF +L + N G++ H+
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 275 QTIKLGLSAVNCVANSLINMY-------------------------------ARSGRLEC 303
Q + GL V SL+NMY A++G ++
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDD 146
Query: 304 ARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETE------HTTGIGACSFTYACLL 357
ARK FD + E++++S +++ V E L+ E + + FT + +L
Sbjct: 147 ARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVL 206
Query: 358 SGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDR-NV 416
S +G + +G+ +HA + K E ++ + ALI MY+KCG+ E A +VFN +G + +V
Sbjct: 207 SACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDV 266
Query: 417 ITWTSIISGFAKHGYATKALELFYEMLET-GVKPNDVTYIAVLSACSHVGLIDEGWKHFN 475
++++I A +G + +LF EM + + PN VT++ +L AC H GLI+EG +F
Sbjct: 267 KAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFK 326
Query: 476 SMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNT 535
M G+ P ++HY CMVD+ GRSGL+ EA FI SMP++ D ++W SLL R+ G+
Sbjct: 327 MMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDI 386
Query: 536 ELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEV 595
+ E A K ++E +P + Y+LLSN+YA RW +V IR M+ K I K G S++EV
Sbjct: 387 KTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEV 446
Query: 596 ENQVHKFHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTDFVLHDVEDEQKEQYLFQHS 655
E VH+F VGD S ++++IY LDE+ ++++ GYV +T VL D+ ++ KE L HS
Sbjct: 447 EGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHS 506
Query: 656 EKIAVAFALISIPNPKPIRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGT 715
EK+A+AF L+ P+RI KNLR+CGDCH +K ISK+ R IVVRD NRFHH +DG+
Sbjct: 507 EKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGS 566
Query: 716 CSCNDYW 722
CSC D+W
Sbjct: 567 CSCRDFW 573
Score = 123 bits (308), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 157/328 (47%), Gaps = 51/328 (15%)
Query: 19 NNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHV 78
++ H + +L M H P+ + F L + N L+ +G+ +L G D
Sbjct: 39 SSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFG-LDKDP 97
Query: 79 SVGCELIDMFVKGCGDIESAHRVFE-------------------------------KMQE 107
V L++M+ CGD+ SA RVF+ +M E
Sbjct: 98 FVRTSLLNMY-SSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPE 156
Query: 108 RNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSG-----YTPDRFTLTSALTACAELELLS 162
RNV++W+ ++ + G ++++DLF M L P+ FT+++ L+AC L L
Sbjct: 157 RNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALE 216
Query: 163 VGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSM-PEHNVVSWTALI 221
GK +H+++ + + +D+ +G +L+DMYAKC GSL ++RVFN++ + +V +++A+I
Sbjct: 217 QGKWVHAYIDKYHVEIDIVLGTALIDMYAKC---GSLERAKRVFNALGSKKDVKAYSAMI 273
Query: 222 ---AGYVRGSGQEQEAMRLFCDMLQG-NVAPNGFTFSSVLKACANLPDFGFGEQLHSQTI 277
A Y G E +LF +M N+ PN TF +L AC + G+ I
Sbjct: 274 CCLAMY----GLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMI 329
Query: 278 -KLGLSAVNCVANSLINMYARSGRLECA 304
+ G++ ++++Y RSG ++ A
Sbjct: 330 EEFGITPSIQHYGCMVDLYGRSGLIKEA 357
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 172/378 (45%), Gaps = 43/378 (11%)
Query: 90 KGCGDIESAHRVFE-KMQERNVVTWNLMMTRFAQ-MGYPE--DSIDLFFRMLLSGYTPDR 145
KG I A+ +F + + WN+++ + P+ I ++ RM +PD
Sbjct: 3 KGAAIIAYANPIFHIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDF 62
Query: 146 FTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKC------------ 193
T L + L +G++ H+ ++ GL D V SL++MY+ C
Sbjct: 63 HTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDD 122
Query: 194 ----------------AVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRL 237
A G + D+R++F+ MPE NV+SW+ LI GYV G+ +EA+ L
Sbjct: 123 SGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVM-CGKYKEALDL 181
Query: 238 FCDML-----QGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLI 292
F +M + V PN FT S+VL AC L G+ +H+ K + + +LI
Sbjct: 182 FREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALI 241
Query: 293 NMYARSGRLECARKCFDLLFEKSLVSC-ETIVDVIVRDLNSDETLNHETEHTTG--IGAC 349
+MYA+ G LE A++ F+ L K V ++ + +DE +E TT I
Sbjct: 242 DMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPN 301
Query: 350 SFTYACLLSGAACIGTIGKGEQIHALVVKS-GFETNLSINNALISMYSKCG-NKEAALQV 407
S T+ +L G I +G+ ++++ G ++ ++ +Y + G KEA +
Sbjct: 302 SVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFI 361
Query: 408 FNDMGDRNVITWTSIISG 425
+ + +V+ W S++SG
Sbjct: 362 ASMPMEPDVLIWGSLLSG 379
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 362 bits (929), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/510 (36%), Positives = 290/510 (56%), Gaps = 32/510 (6%)
Query: 245 NVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYA-------- 296
++ P+ +T + +++AC L G Q+H TI+ G V LI++YA
Sbjct: 103 DLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSC 162
Query: 297 -----------------------RSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSD 333
R G + ARK F+ + E+ ++ ++ + S
Sbjct: 163 HKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESR 222
Query: 334 ETLN-HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALI 392
E LN G+ +LS +G + +G H+ + ++ + + + L+
Sbjct: 223 EALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLV 282
Query: 393 SMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDV 452
+Y+KCG+ E A++VF M ++NV TW+S ++G A +G+ K LELF M + GV PN V
Sbjct: 283 DLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAV 342
Query: 453 TYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINS 512
T+++VL CS VG +DEG +HF+SMR+ G+ P++EHY C+VD+ R+G L +A+ I
Sbjct: 343 TFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQ 402
Query: 513 MPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDV 572
MP+ A VW SLL + R++ N ELG A+K +LE E + Y+LLSN+YA W +V
Sbjct: 403 MPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNV 462
Query: 573 AAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELDELASKIKKLGYV 632
+ +R++MK K + K+ G S +EV +VH+F VGD SHP+ +I +++ +++ GY
Sbjct: 463 SHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYK 522
Query: 633 PNTDFVLHDVEDEQKEQYLFQHSEKIAVAFALISIPNPKPIRIFKNLRVCGDCHTAIKYI 692
+T V+ D+++E+KE L HSEK A+AF ++S+ PIRI KNLRVCGDCH I
Sbjct: 523 ADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMI 582
Query: 693 SKVTGRVIVVRDANRFHHIKDGTCSCNDYW 722
SK+ R I+VRD NRFHH KDG CSCN +W
Sbjct: 583 SKIFNREIIVRDRNRFHHFKDGHCSCNGFW 612
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 158/335 (47%), Gaps = 40/335 (11%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHG--FYPNEYCFTAALRACSNSLYFSVG 61
K L + SM+ + + ++ + +L G P+ Y ++AC+ G
Sbjct: 68 KPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETG 127
Query: 62 RVVFGSVLKTGY-FDSHVSVGCELIDMFVK------------------------------ 90
V G ++ G+ D HV G LI ++ +
Sbjct: 128 LQVHGMTIRRGFDNDPHVQTG--LISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACA 185
Query: 91 GCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTS 150
CGD+ A ++FE M ER+ + WN M++ +AQ+G +++++F M L G + + S
Sbjct: 186 RCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMIS 245
Query: 151 ALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMP 210
L+AC +L L G+ HS++ R+ + + + + +LVD+YAKC G + + VF M
Sbjct: 246 VLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKC---GDMEKAMEVFWGME 302
Query: 211 EHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGE 270
E NV +W++ + G +G ++ + LF M Q V PN TF SVL+ C+ + G+
Sbjct: 303 EKNVYTWSSALNGLAM-NGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQ 361
Query: 271 Q-LHSQTIKLGLSAVNCVANSLINMYARSGRLECA 304
+ S + G+ L+++YAR+GRLE A
Sbjct: 362 RHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDA 396
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 178/386 (46%), Gaps = 45/386 (11%)
Query: 95 IESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSG--YTPDRFTLTSAL 152
++ A+++ ++ ++ + N M+ + PE S D + R+L SG PD +T+ +
Sbjct: 56 LDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLV 115
Query: 153 TACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAK-------------------- 192
AC L + G Q+H IR G D V L+ +YA+
Sbjct: 116 QACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFV 175
Query: 193 --------CAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQG 244
CA G +V +R++F MPE + ++W A+I+GY + G+ +EA+ +F M
Sbjct: 176 CRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQ-VGESREALNVFHLMQLE 234
Query: 245 NVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECA 304
V NG SVL AC L G HS + + +A +L+++YA+ G +E A
Sbjct: 235 GVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKA 294
Query: 305 RKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGAACI 363
+ F + EK++ + + ++ + + ++ L G+ + T+ +L G + +
Sbjct: 295 MEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVV 354
Query: 364 GTIGKGEQ-IHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDR-NVITWTS 421
G + +G++ ++ + G E L L+ +Y++ G E A+ + M + + W+S
Sbjct: 355 GFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSS 414
Query: 422 IISGFAKHGYATKALELFYEMLETGV 447
++ +A++ Y+ LE GV
Sbjct: 415 LL-------HASR----MYKNLELGV 429
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 107/222 (48%), Gaps = 11/222 (4%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
+RD ++W +M+S +A EAL F M G N + L AC+ GR
Sbjct: 202 ERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRW 261
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
S ++ V + L+D++ K CGD+E A VF M+E+NV TW+ + A
Sbjct: 262 AH-SYIERNKIKITVRLATTLVDLYAK-CGDMEKAMEVFWGMEEKNVYTWSSALNGLAMN 319
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCV- 182
G+ E ++LF M G TP+ T S L C+ + + G Q H +R+ ++ +
Sbjct: 320 GFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEG-QRHFDSMRNEFGIEPQLE 378
Query: 183 --GCSLVDMYAKCAVDGSLVDSRRVFNSMP-EHNVVSWTALI 221
GC LVD+YA+ G L D+ + MP + + W++L+
Sbjct: 379 HYGC-LVDLYARA---GRLEDAVSIIQQMPMKPHAAVWSSLL 416
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 362 bits (928), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/570 (35%), Positives = 328/570 (57%), Gaps = 18/570 (3%)
Query: 167 LHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVR 226
LH+ ++ G A D LV Y K + +R++F+ M E NVVSWT++I+GY
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLK---EINTARKLFDEMCEPNVVSWTSVISGY-N 106
Query: 227 GSGQEQEAMRLFCDMLQGN-VAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVN 285
G+ Q A+ +F M + V PN +TF+SV KAC+ L + G+ +H++ GL
Sbjct: 107 DMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNI 166
Query: 286 CVANSLINMYARSGRLECARKCFDLL--FEKSLVSCETIVDVIVRDLNSDETLNHETEHT 343
V++SL++MY + +E AR+ FD + + +++VS +++ ++ E +
Sbjct: 167 VVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFN 226
Query: 344 TGIG---ACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGN 400
+ A F A ++S + +G + G+ H LV + G+E+N + +L+ MY+KCG+
Sbjct: 227 AALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGS 286
Query: 401 KEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSA 460
A ++F + +VI++TS+I AKHG A++LF EM+ + PN VT + VL A
Sbjct: 287 LSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHA 346
Query: 461 CSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDAD-- 518
CSH GL++EG ++ + M +GVVP HY C+VD+LGR G + EA E ++ + A+
Sbjct: 347 CSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQG 406
Query: 519 AMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKT 578
A++W +LL + R+HG E+ A+K +++ + YI LSN YA W D ++R
Sbjct: 407 ALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLE 466
Query: 579 MKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELDELASKIKKLGY------V 632
MK+ +KE SWIE ++ V+ FH GD S ++ +I L +L ++K+ G+ +
Sbjct: 467 MKRSGNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERGHRGSSSMI 526
Query: 633 PNTDFVLHDVEDEQKEQYLFQHSEKIAVAFALISIPNPKPIRIFKNLRVCGDCHTAIKYI 692
+ V DV++E K++ + H E++A+A+ L+ +P IRI NLR+C DCH A K I
Sbjct: 527 TTSSSVFVDVDEEAKDEMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLI 586
Query: 693 SKVTGRVIVVRDANRFHHIKDGTCSCNDYW 722
S++ R IVVRD NRFH K+G+C+C DYW
Sbjct: 587 SEIVEREIVVRDVNRFHCFKNGSCTCRDYW 616
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/306 (33%), Positives = 162/306 (52%), Gaps = 14/306 (4%)
Query: 6 DLVSWCSMMSCFANNSMEHEALVTFLDMLE-HGFYPNEYCFTAALRACSNSLYFSVGRVV 64
++VSW S++S + + AL F M E PNEY F + +ACS +G+ +
Sbjct: 94 NVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNI 153
Query: 65 FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKM--QERNVVTWNLMMTRFAQ 122
+ +G ++ V L+DM+ K C D+E+A RVF+ M RNVV+W M+T +AQ
Sbjct: 154 HARLEISG-LRRNIVVSSSLVDMYGK-CNDVETARRVFDSMIGYGRNVVSWTSMITAYAQ 211
Query: 123 MGYPEDSIDLF--FRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDL 180
++I+LF F L+ ++F L S ++AC+ L L GK H V R G +
Sbjct: 212 NARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNT 271
Query: 181 CVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCD 240
V SL+DMYAKC GSL + ++F + H+V+S+T++I + G + A++LF +
Sbjct: 272 VVATSLLDMYAKC---GSLSCAEKIFLRIRCHSVISYTSMIMAKAK-HGLGEAAVKLFDE 327
Query: 241 MLQGNVAPNGFTFSSVLKACAN--LPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARS 298
M+ G + PN T VL AC++ L + G E L K G+ + +++M R
Sbjct: 328 MVAGRINPNYVTLLGVLHACSHSGLVNEGL-EYLSLMAEKYGVVPDSRHYTCVVDMLGRF 386
Query: 299 GRLECA 304
GR++ A
Sbjct: 387 GRVDEA 392
Score = 139 bits (349), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 115/420 (27%), Positives = 204/420 (48%), Gaps = 21/420 (5%)
Query: 69 LKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPED 128
LK G+ +V L+ +VK +I +A ++F++M E NVV+W +++ + MG P++
Sbjct: 56 LKLGFASDTFTVN-HLVISYVK-LKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQN 113
Query: 129 SIDLFFRMLLS-GYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLV 187
++ +F +M P+ +T S AC+ L +GK +H+ + SGL ++ V SLV
Sbjct: 114 ALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLV 173
Query: 188 DMYAKCAVDGSLVDSRRVFNSMPEH--NVVSWTALIAGYVRGS-GQEQ-EAMRLFCDMLQ 243
DMY KC + +RRVF+SM + NVVSWT++I Y + + G E E R F L
Sbjct: 174 DMYGKC---NDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALT 230
Query: 244 GNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLEC 303
+ A N F +SV+ AC++L +G+ H + G + VA SL++MYA+ G L C
Sbjct: 231 SDRA-NQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSC 289
Query: 304 ARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTG-IGACSFTYACLLSGAAC 362
A K F + S++S +++ + + + E G I T +L +
Sbjct: 290 AEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSH 349
Query: 363 IGTIGKG-EQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDM---GDRNVIT 418
G + +G E + + K G + ++ M + G + A ++ + ++ +
Sbjct: 350 SGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALL 409
Query: 419 WTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMR 478
W +++S HG E ++++ + YIA+ +A + G GW+ S+R
Sbjct: 410 WGALLSAGRLHGRVEIVSEASKRLIQSNQQVTS-AYIALSNAYAVSG----GWEDSESLR 464
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 144/294 (48%), Gaps = 25/294 (8%)
Query: 267 GFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVI 326
F LH+ T+KLG ++ N L+ Y + + ARK FD + E ++VS +++
Sbjct: 46 AFTNLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGY 105
Query: 327 VRDLNSDE---TLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFET 383
D+ + ++ + + +T+A + + + G+ IHA + SG
Sbjct: 106 -NDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRR 164
Query: 384 NLSINNALISMYSKCGNKEAALQVFNDM--GDRNVITWTSIISGFAKHGYATKALELF-- 439
N+ ++++L+ MY KC + E A +VF+ M RNV++WTS+I+ +A++ +A+ELF
Sbjct: 165 NIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRS 224
Query: 440 YEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYA------CM 493
+ T + N +V+SACS +G + G + HG+V R + + +
Sbjct: 225 FNAALTSDRANQFMLASVISACSSLGRLQWG-------KVAHGLVTRGGYESNTVVATSL 277
Query: 494 VDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILE 547
+D+ + G LS A + + + + + S++ + HG LGE A K+ E
Sbjct: 278 LDMYAKCGSLSCAEKIFLRIRCHS-VISYTSMIMAKAKHG---LGEAAVKLFDE 327
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 112/231 (48%), Gaps = 6/231 (2%)
Query: 1 MGSKRDLVSWCSMMSCFANNSMEHEALVTF--LDMLEHGFYPNEYCFTAALRACSNSLYF 58
+G R++VSW SM++ +A N+ HEA+ F + N++ + + ACS+
Sbjct: 193 IGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRL 252
Query: 59 SVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMT 118
G+V G V + GY +S+ V L+DM+ K CG + A ++F +++ +V+++ M+
Sbjct: 253 QWGKVAHGLVTRGGY-ESNTVVATSLLDMYAK-CGSLSCAEKIFLRIRCHSVISYTSMIM 310
Query: 119 RFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVI-RSGLA 177
A+ G E ++ LF M+ P+ TL L AC+ L++ G + S + + G+
Sbjct: 311 AKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVV 370
Query: 178 LDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALI-AGYVRG 227
D +VDM + + + E + W AL+ AG + G
Sbjct: 371 PDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHG 421
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 357 bits (916), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 202/580 (34%), Positives = 319/580 (55%), Gaps = 9/580 (1%)
Query: 147 TLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVF 206
+ L C ++ L +++HS VI +GL + L+ + +V GSL ++ +F
Sbjct: 7 VIVRMLQGCNSMKKL---RKIHSHVIINGLQHHPSIFNHLLR-FCAVSVTGSLSHAQLLF 62
Query: 207 NSMPEHNVVS-WTALIAGYVRGSGQEQEAMRLFCDMLQGNVA-PNGFTFSSVLKACANLP 264
+ S W LI G+ S ++ + ML +V+ P+ FTF+ LK+C +
Sbjct: 63 DHFDSDPSTSDWNYLIRGF-SNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIK 121
Query: 265 DFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVD 324
++H I+ G VA SL+ Y+ +G +E A K FD + + LVS ++
Sbjct: 122 SIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMIC 181
Query: 325 VIVR-DLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFET 383
L++ ++ G+ S+T LLS A + + G +H + E+
Sbjct: 182 CFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCES 241
Query: 384 NLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEML 443
+ ++NALI MY+KCG+ E A+ VFN M R+V+TW S+I G+ HG+ +A+ F +M+
Sbjct: 242 CVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMV 301
Query: 444 ETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLL 503
+GV+PN +T++ +L CSH GL+ EG +HF M + P V+HY CMVD+ GR+G L
Sbjct: 302 ASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQL 361
Query: 504 SEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLY 563
++E I + D ++WR+LLGSC++H N ELGE A K +++ E + Y+L++++Y
Sbjct: 362 ENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIY 421
Query: 564 ATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELDELA 623
+ A++RK ++ + G+SWIE+ +QVHKF V D HP++ IY EL E+
Sbjct: 422 SAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVI 481
Query: 624 SKIKKLGYVP-NTDFVLHDVEDEQKEQYLFQHSEKIAVAFALISIPNPKPIRIFKNLRVC 682
++ GY P +++ + D HSEK+A+A+ L+ +RI KNLRVC
Sbjct: 482 NRAILAGYKPEDSNRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVC 541
Query: 683 GDCHTAIKYISKVTGRVIVVRDANRFHHIKDGTCSCNDYW 722
DCH+ KY+SK R I+VRD RFHH DG CSCNDYW
Sbjct: 542 RDCHSFTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 156/298 (52%), Gaps = 14/298 (4%)
Query: 10 WCSMMSCFANNSMEHEALVTFLDMLEHGF-YPNEYCFTAALRACSNSLYFSVGRVVFGSV 68
W ++ F+N+S +++ + ML P+ + F AL++C + GSV
Sbjct: 74 WNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSV 133
Query: 69 LKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPED 128
+++G+ D + V L+ + G +E A +VF++M R++V+WN+M+ F+ +G
Sbjct: 134 IRSGFLDDAI-VATSLVRCYSAN-GSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQ 191
Query: 129 SIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCS--L 186
++ ++ RM G D +TL + L++CA + L++G LH I + + CV S L
Sbjct: 192 ALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHR--IACDIRCESCVFVSNAL 249
Query: 187 VDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGY-VRGSGQEQEAMRLFCDMLQGN 245
+DMYAKC GSL ++ VFN M + +V++W ++I GY V G G EA+ F M+
Sbjct: 250 IDMYAKC---GSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHG--VEAISFFRKMVASG 304
Query: 246 VAPNGFTFSSVLKACANLPDFGFG-EQLHSQTIKLGLSAVNCVANSLINMYARSGRLE 302
V PN TF +L C++ G E + + L+ ++++Y R+G+LE
Sbjct: 305 VRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLE 362
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 112/222 (50%), Gaps = 11/222 (4%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
RDLVSW M+ CF++ + ++AL + M G + Y A L +C++ ++G V+
Sbjct: 171 RDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMG-VM 229
Query: 65 FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG 124
+ +S V V LIDM+ K CG +E+A VF M++R+V+TWN M+ + G
Sbjct: 230 LHRIACDIRCESCVFVSNALIDMYAK-CGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHG 288
Query: 125 YPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCV-- 182
+ ++I F +M+ SG P+ T L C+ L+ G + H ++ S L V
Sbjct: 289 HGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVE-HFEIMSSQFHLTPNVKH 347
Query: 183 -GCSLVDMYAKCAVDGSLVDS-RRVFNSMPEHNVVSWTALIA 222
GC +VD+Y + G L +S ++ S + V W L+
Sbjct: 348 YGC-MVDLYGRA---GQLENSLEMIYASSCHEDPVLWRTLLG 385
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 354 bits (909), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 203/603 (33%), Positives = 333/603 (55%), Gaps = 10/603 (1%)
Query: 25 EALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCEL 84
E+L+ F +M GF PN + F +AC+ +V ++K+ ++ S V VG
Sbjct: 35 ESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFW-SDVFVGTAT 93
Query: 85 IDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPD 144
+DMFVK C ++ A +VFE+M ER+ TWN M++ F Q G+ + + LF M L+ TPD
Sbjct: 94 VDMFVK-CNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPD 152
Query: 145 RFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRR 204
T+ + + + + + L + + +H+ IR G+ + + V + + Y KC G L ++
Sbjct: 153 SVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKC---GDLDSAKL 209
Query: 205 VFNSMP--EHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACAN 262
VF ++ + VVSW ++ Y G+ +A L+C ML+ P+ TF ++ +C N
Sbjct: 210 VFEAIDRGDRTVVSWNSMFKAY-SVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQN 268
Query: 263 LPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETI 322
G +HS I LG N+ I+MY++S AR FD++ ++ VS +
Sbjct: 269 PETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVM 328
Query: 323 VDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGF 381
+ + DE L +G T L+SG G++ G+ I A G
Sbjct: 329 ISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGC 388
Query: 382 ET-NLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFY 440
+ N+ I NALI MYSKCG+ A +F++ ++ V+TWT++I+G+A +G +AL+LF
Sbjct: 389 KRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFS 448
Query: 441 EMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRS 500
+M++ KPN +T++AVL AC+H G +++GW++F+ M+ + + P ++HY+CMVD+LGR
Sbjct: 449 KMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRK 508
Query: 501 GLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLS 560
G L EA+E I +M DA +W +LL +C++H N ++ E AA+ + EP A Y+ ++
Sbjct: 509 GKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMA 568
Query: 561 NLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELD 620
N+YA W A IR MKQ+ I K G S I+V + H F VG+ H + + IY L+
Sbjct: 569 NIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFTLN 628
Query: 621 ELA 623
L+
Sbjct: 629 GLS 631
Score = 166 bits (419), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 114/443 (25%), Positives = 214/443 (48%), Gaps = 38/443 (8%)
Query: 109 NVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLH 168
+V WNL + P +S+ LF M G+ P+ FT ACA L + + +H
Sbjct: 16 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVH 75
Query: 169 SWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGS 228
+ +I+S D+ VG + VDM+ KC S+ + +VF MPE + +W A+++G+ + S
Sbjct: 76 AHLIKSPFWSDVFVGTATVDMFVKC---NSVDYAAKVFERMPERDATTWNAMLSGFCQ-S 131
Query: 229 GQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVA 288
G +A LF +M + P+ T +++++ + E +H+ I+LG+ VA
Sbjct: 132 GHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVA 191
Query: 289 NSLINMYARSGRLECARKCFDLL--FEKSLVSCETIVDVI-----VRDLNSDETLNHETE 341
N+ I+ Y + G L+ A+ F+ + ++++VS ++ D L E
Sbjct: 192 NTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREE 251
Query: 342 HTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNK 401
+ T+ L + T+ +G IH+ + G + ++ N ISMYSK +
Sbjct: 252 FKPDLS----TFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDT 307
Query: 402 EAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSAC 461
+A +F+ M R ++WT +ISG+A+ G +AL LF+ M+++G KP+ VT ++++S C
Sbjct: 308 CSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGC 367
Query: 462 SHVGLIDEG-WKHFNSMRHCHGVVPRVEHYAC----------MVDVLGRSGLLSEAIEFI 510
G ++ G W + R + Y C ++D+ + G + EA +
Sbjct: 368 GKFGSLETGKW-----------IDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIF 416
Query: 511 NSMPLDADAMVWRSLLGSCRVHG 533
++ P + + W +++ ++G
Sbjct: 417 DNTP-EKTVVTWTTMIAGYALNG 438
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/306 (31%), Positives = 153/306 (50%), Gaps = 16/306 (5%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
R +VSW SM ++ +A + ML F P+ F +C N + GR++
Sbjct: 219 RTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLI 278
Query: 65 FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG 124
+ G D + I M+ K D SA +F+ M R V+W +M++ +A+ G
Sbjct: 279 HSHAIHLGT-DQDIEAINTFISMYSKS-EDTCSARLLFDIMTSRTCVSWTVMISGYAEKG 336
Query: 125 YPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGC 184
++++ LF M+ SG PD TL S ++ C + L GK + + G D + C
Sbjct: 337 DMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMIC 396
Query: 185 -SLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQ 243
+L+DMY+KC GS+ ++R +F++ PE VV+WT +IAGY +G EA++LF M+
Sbjct: 397 NALIDMYSKC---GSIHEARDIFDNTPEKTVVTWTTMIAGYAL-NGIFLEALKLFSKMID 452
Query: 244 GNVAPNGFTFSSVLKACANLPDFGFG-EQLHSQ----TIKLGLSAVNCVANSLINMYARS 298
+ PN TF +VL+ACA+ G E H I GL +C ++++ R
Sbjct: 453 LDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSC----MVDLLGRK 508
Query: 299 GRLECA 304
G+LE A
Sbjct: 509 GKLEEA 514
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/496 (23%), Positives = 211/496 (42%), Gaps = 47/496 (9%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
+RD +W +M+S F + +A F +M + P+ +++ S +
Sbjct: 115 ERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEA 174
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQ--ERNVVTWNLMMTRFA 121
+ ++ G D V+V I + K CGD++SA VFE + +R VV+WN M ++
Sbjct: 175 MHAVGIRLG-VDVQVTVANTWISTYGK-CGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYS 232
Query: 122 QMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLC 181
G D+ L+ ML + PD T + +C E L+ G+ +HS I G D+
Sbjct: 233 VFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIE 292
Query: 182 VGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDM 241
+ + MY+K +R +F+ M VSWT +I+GY G EA+ LF M
Sbjct: 293 AINTFISMYSKSE---DTCSARLLFDIMTSRTCVSWTVMISGYAE-KGDMDEALALFHAM 348
Query: 242 LQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNC-VANSLINMYARSGR 300
++ P+ T S++ C G+ + ++ G N + N+LI+MY++ G
Sbjct: 349 IKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGS 408
Query: 301 LECARKCFDLLFEKSLVSCETIV-------------DVIVRDLNSDETLNHETEHTTGIG 347
+ AR FD EK++V+ T++ + + ++ D NH
Sbjct: 409 IHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNH--------- 459
Query: 348 ACSFTYACLLSGAACIGTIGKG-EQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQ 406
T+ +L A G++ KG E H + L + ++ + + G E AL+
Sbjct: 460 ---ITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALE 516
Query: 407 VFNDMGDR-NVITWTSIISGFAKH---GYATKALELFYEMLETGVKPNDVTYIAVLSACS 462
+ +M + + W ++++ H A +A E + + P Y+ + + +
Sbjct: 517 LIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAP----YVEMANIYA 572
Query: 463 HVGLIDEGWKHFNSMR 478
G+ W F +R
Sbjct: 573 AAGM----WDGFARIR 584
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 103/236 (43%), Gaps = 36/236 (15%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR 62
+ R VSW M+S +A EAL F M++ G P+ + + C
Sbjct: 318 TSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGK-------- 369
Query: 63 VVFGSVLKTGYFDSHVSV-GCE---------LIDMFVKGCGDIESAHRVFEKMQERNVVT 112
FGS+ + D+ + GC+ LIDM+ K CG I A +F+ E+ VVT
Sbjct: 370 --FGSLETGKWIDARADIYGCKRDNVMICNALIDMYSK-CGSIHEARDIFDNTPEKTVVT 426
Query: 113 WNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAE-------LELLSVGK 165
W M+ +A G +++ LF +M+ Y P+ T + L ACA E + K
Sbjct: 427 WTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMK 486
Query: 166 QLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALI 221
Q+++ I GL C +VD+ + ++ R ++ P+ + W AL+
Sbjct: 487 QVYN--ISPGLDHYSC----MVDLLGRKGKLEEALELIRNMSAKPDAGI--WGALL 534
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 352 bits (903), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 199/643 (30%), Positives = 344/643 (53%), Gaps = 23/643 (3%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
+R+++S+ S++S + +A+ FL+ E +++ + AL C +G +
Sbjct: 110 ERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGEL 169
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
+ G V+ G V + LIDM+ K CG ++ A +F++ ER+ V+WN +++ + ++
Sbjct: 170 LHGLVVVNG-LSQQVFLINVLIDMYSK-CGKLDQAMSLFDRCDERDQVSWNSLISGYVRV 227
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACA---ELELLSVGKQLHSWVIRSGLALDL 180
G E+ ++L +M G + L S L AC + G +H + + G+ D+
Sbjct: 228 GAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDI 287
Query: 181 CVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVR----GSGQEQEAMR 236
V +L+DMYAK +GSL ++ ++F+ MP NVV++ A+I+G+++ EA +
Sbjct: 288 VVRTALLDMYAK---NGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFK 344
Query: 237 LFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYA 296
LF DM + + P+ TFS VLKAC+ +G Q+H+ K + + ++LI +YA
Sbjct: 345 LFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYA 404
Query: 297 RSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYAC 355
G E +CF ++ + S +++D V++ + + ++ I +T +
Sbjct: 405 LMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSL 464
Query: 356 LLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRN 415
++S A + GEQI +KSG + S+ + ISMY+K GN A QVF ++ + +
Sbjct: 465 MMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPD 524
Query: 416 VITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFN 475
V T++++IS A+HG A +AL +F M G+KPN ++ VL AC H GL+ +G K+F
Sbjct: 525 VATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQ 584
Query: 476 SMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNT 535
M++ + + P +H+ C+VD+LGR+G LS+A I S + WR+LL SCRV+ ++
Sbjct: 585 CMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDS 644
Query: 536 ELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEV 595
+G+ A+ ++E EP +Y+LL N+Y +R+ M+ + + KE SWI +
Sbjct: 645 VIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVI 704
Query: 596 ENQVHKFHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTDFV 638
NQ H F V D SHP +Q IY L+ + N DFV
Sbjct: 705 GNQTHSFAVADLSHPSSQMIYTMLETM----------DNVDFV 737
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 128/461 (27%), Positives = 227/461 (49%), Gaps = 43/461 (9%)
Query: 92 CGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSA 151
C ++ A ++F++M ERN++++N +++ + QMG+ E +++LF + D+FT A
Sbjct: 95 CRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGA 154
Query: 152 LTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPE 211
L C E L +G+ LH V+ +GL+ + + L+DMY+KC G L + +F+ E
Sbjct: 155 LGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKC---GKLDQAMSLFDRCDE 211
Query: 212 HNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGF--- 268
+ VSW +LI+GYVR G +E + L M + + + SVLKAC + GF
Sbjct: 212 RDQVSWNSLISGYVR-VGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEK 270
Query: 269 GEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIV----- 323
G +H T KLG+ V +L++MYA++G L+ A K F L+ K++V+ ++
Sbjct: 271 GMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQ 330
Query: 324 -DVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFE 382
D I + +S+ G+ T++ +L + T+ G QIHAL+ K+ F+
Sbjct: 331 MDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQ 390
Query: 383 TNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEM 442
++ I +ALI +Y+ G+ E +Q F +++ +WTS+I ++ A +LF ++
Sbjct: 391 SDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQL 450
Query: 443 LETGVKPNDVTYIAVLSACSHVG-----------LIDEGWKHFNSMRHCHGVV------- 484
+ ++P + T ++SAC+ I G F S++ +
Sbjct: 451 FSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNM 510
Query: 485 ------------PRVEHYACMVDVLGRSGLLSEAIEFINSM 513
P V Y+ M+ L + G +EA+ SM
Sbjct: 511 PLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESM 551
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 132/277 (47%), Gaps = 11/277 (3%)
Query: 245 NVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECA 304
N A + + + + A G+ H IK L+ + N+L+NMY + L A
Sbjct: 42 NTALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFA 101
Query: 305 RKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETE-HTTGIGACSFTYACLLS--GAA 361
R+ FD + E++++S +++ + ++ + E + FTYA L G
Sbjct: 102 RQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGER 161
Query: 362 CIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTS 421
C + GE +H LVV +G + + N LI MYSKCG + A+ +F+ +R+ ++W S
Sbjct: 162 C--DLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNS 219
Query: 422 IISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCH 481
+ISG+ + G A + L L +M G+ +VL AC ++EG+ HC+
Sbjct: 220 LISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCIN--LNEGFIEKGMAIHCY 277
Query: 482 ----GVVPRVEHYACMVDVLGRSGLLSEAIEFINSMP 514
G+ + ++D+ ++G L EAI+ + MP
Sbjct: 278 TAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMP 314
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 105/230 (45%), Gaps = 23/230 (10%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR 62
SK+D+ SW SM+ C N A F + P EY + + AC++ S G
Sbjct: 420 SKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGE 479
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
+ G +K+G D+ SV I M+ K G++ A++VF ++Q +V T++ M++ AQ
Sbjct: 480 QIQGYAIKSG-IDAFTSVKTSSISMYAKS-GNMPLANQVFIEVQNPDVATYSAMISSLAQ 537
Query: 123 MGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCV 182
G +++++F M G P++ L AC H ++ GL C+
Sbjct: 538 HGSANEALNIFESMKTHGIKPNQQAFLGVLIACC-----------HGGLVTQGLKYFQCM 586
Query: 183 G----CSLVDMYAKCAVD-----GSLVDSRR-VFNSMPEHNVVSWTALIA 222
+ + + C VD G L D+ + +S + + V+W AL++
Sbjct: 587 KNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLS 636
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 5/213 (2%)
Query: 353 YACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMG 412
Y L AA G++ G+ H ++KS L + N L++MY KC A Q+F+ M
Sbjct: 50 YKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMP 109
Query: 413 DRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWK 472
+RN+I++ S+ISG+ + G+ +A+ELF E E +K + TY L C +D G +
Sbjct: 110 ERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLG-E 168
Query: 473 HFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLL-GSCRV 531
+ + +G+ +V ++D+ + G L +A+ + + D + W SL+ G RV
Sbjct: 169 LLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD-ERDQVSWNSLISGYVRV 227
Query: 532 HGNTELGEHAAKMILEREPHDPATYILLSNLYA 564
E AKM R+ + TY L S L A
Sbjct: 228 GAAEEPLNLLAKM--HRDGLNLTTYALGSVLKA 258
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 351 bits (900), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 203/619 (32%), Positives = 343/619 (55%), Gaps = 22/619 (3%)
Query: 6 DLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVF 65
D+VSW +++S F +N + AL + M G + + ++ AL C S F +G +
Sbjct: 141 DVVSWNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQ 197
Query: 66 GSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG- 124
+V+KTG +S + VG I M+ + G A RVF++M +++++WN +++ +Q G
Sbjct: 198 STVVKTG-LESDLVVGNSFITMYSRS-GSFRGARRVFDEMSFKDMISWNSLLSGLSQEGT 255
Query: 125 YPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGC 184
+ +++ +F M+ G D + TS +T C L + +Q+H I+ G L VG
Sbjct: 256 FGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGN 315
Query: 185 SLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQG 244
L+ Y+KC V L + VF+ M E NVVSWT +I S + +A+ +F +M
Sbjct: 316 ILMSRYSKCGV---LEAVKSVFHQMSERNVVSWTTMI------SSNKDDAVSIFLNMRFD 366
Query: 245 NVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECA 304
V PN TF ++ A G ++H IK G + V NS I +YA+ LE A
Sbjct: 367 GVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDA 426
Query: 305 RKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIG 364
+K F+ + + ++S ++ ++ S E L +T+ +L+ A
Sbjct: 427 KKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMPNEYTFGSVLNAIAFAE 486
Query: 365 TIG--KGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSI 422
I +G++ HA ++K G + +++AL+ MY+K GN + + +VFN+M +N WTSI
Sbjct: 487 DISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSI 546
Query: 423 ISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHG 482
IS ++ HG + LF++M++ V P+ VT+++VL+AC+ G++D+G++ FN M +
Sbjct: 547 ISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYN 606
Query: 483 VVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAA 542
+ P EHY+CMVD+LGR+G L EA E ++ +P + +S+LGSCR+HGN ++G A
Sbjct: 607 LEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVA 666
Query: 543 KMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVEN----- 597
++ +E +P +Y+ + N+YA +E W A IRK M++K + KEAG+SWI+V +
Sbjct: 667 ELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSL 726
Query: 598 QVHKFHVGDTSHPQAQKIY 616
+ F GD SHP++ +IY
Sbjct: 727 TMQGFSSGDKSHPKSDEIY 745
Score = 212 bits (539), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 157/545 (28%), Positives = 280/545 (51%), Gaps = 37/545 (6%)
Query: 26 ALVTFLDMLEHGFYP---NEYCFTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGC 82
AL F + L+ G++ +E AL+AC L G + G +G F S V V
Sbjct: 59 ALSIFKENLQLGYFGRHMDEVTLCLALKACRGDL--KRGCQIHGFSTTSG-FTSFVCVSN 115
Query: 83 ELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFF--RMLLSG 140
++ M+ K G ++A +FE + + +VV+WN +++ G+ ++ I L F RM +G
Sbjct: 116 AVMGMYRKA-GRFDNALCIFENLVDPDVVSWNTILS-----GFDDNQIALNFVVRMKSAG 169
Query: 141 YTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLV 200
D FT ++AL+ C E +G QL S V+++GL DL VG S + MY++ GS
Sbjct: 170 VVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSR---SGSFR 226
Query: 201 DSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKAC 260
+RRVF+ M +++SW +L++G + EA+ +F DM++ V + +F+SV+ C
Sbjct: 227 GARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTC 286
Query: 261 ANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCE 320
+ D Q+H IK G ++ V N L++ Y++ G LE + F + E+++VS
Sbjct: 287 CHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWT 346
Query: 321 TIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKS 379
T++ N D+ ++ G+ T+ L++ C I +G +IH L +K+
Sbjct: 347 TMISS-----NKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKT 401
Query: 380 GFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELF 439
GF + S+ N+ I++Y+K E A + F D+ R +I+W ++ISGFA++G++ +AL++F
Sbjct: 402 GFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMF 461
Query: 440 YEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYAC------M 493
+ PN+ T+ +VL+A + I + CH + ++ +C +
Sbjct: 462 LSAAAETM-PNEYTFGSVLNAIAFAEDIS-----VKQGQRCHAHLLKLGLNSCPVVSSAL 515
Query: 494 VDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTE-LGEHAAKMILEREPHD 552
+D+ + G + E+ + N M + VW S++ + HG+ E + KMI E D
Sbjct: 516 LDMYAKRGNIDESEKVFNEMS-QKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPD 574
Query: 553 PATYI 557
T++
Sbjct: 575 LVTFL 579
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 90/170 (52%), Gaps = 5/170 (2%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSV--GR 62
R+++SW +M+S FA N HEAL FL PNEY F + L A + + SV G+
Sbjct: 436 REIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQ 494
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
+LK G +S V L+DM+ K G+I+ + +VF +M ++N W +++ ++
Sbjct: 495 RCHAHLLKLG-LNSCPVVSSALLDMYAKR-GNIDESEKVFNEMSQKNQFVWTSIISAYSS 552
Query: 123 MGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVI 172
G E ++LF +M+ PD T S LTAC ++ G ++ + +I
Sbjct: 553 HGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMI 602
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 348 bits (894), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 205/626 (32%), Positives = 342/626 (54%), Gaps = 9/626 (1%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
K ++V W M+ F + + +L ++ + FT AL ACS S GR
Sbjct: 234 KSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQ 293
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
+ V+K G + V L+ M+ K CG + A VF + ++ + WN M+ +A+
Sbjct: 294 IHCDVVKMGLHNDPY-VCTSLLSMYSK-CGMVGEAETVFSCVVDKRLEIWNAMVAAYAEN 351
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVG 183
Y ++DLF M PD FTL++ ++ C+ L L + GK +H+ + + + +
Sbjct: 352 DYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIE 411
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQ 243
+L+ +Y+KC D D+ VF SM E ++V+W +LI+G + +G+ +EA+++F DM
Sbjct: 412 SALLTLYSKCGCDP---DAYLVFKSMEEKDMVAWGSLISGLCK-NGKFKEALKVFGDMKD 467
Query: 244 GN--VAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRL 301
+ + P+ +SV ACA L FG Q+H IK GL V +SLI++Y++ G
Sbjct: 468 DDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLP 527
Query: 302 ECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGA 360
E A K F + +++V+ +++ R+ + +++ + GI S + +L
Sbjct: 528 EMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAI 587
Query: 361 ACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWT 420
+ ++ KG+ +H ++ G ++ + NALI MY KCG + A +F M +++ITW
Sbjct: 588 SSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWN 647
Query: 421 SIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHC 480
+I G+ HG AL LF EM + G P+DVT+++++SAC+H G ++EG F M+
Sbjct: 648 LMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQD 707
Query: 481 HGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEH 540
+G+ P +EHYA MVD+LGR+GLL EA FI +MP++AD+ +W LL + R H N ELG
Sbjct: 708 YGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGIL 767
Query: 541 AAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVH 600
+A+ +L EP +TY+ L NLY + A + MK+K + K+ G SWIEV ++ +
Sbjct: 768 SAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTN 827
Query: 601 KFHVGDTSHPQAQKIYDELDELASKI 626
F G +S P +I++ L+ L S +
Sbjct: 828 VFFSGGSSSPMKAEIFNVLNRLKSNM 853
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 143/511 (27%), Positives = 261/511 (51%), Gaps = 24/511 (4%)
Query: 38 FYPNEYCFTAALRACSNSLYFSVGRVVFGSVLKTGY-FDSHVSVGCELIDMFVKGCGDIE 96
F+ + + F + L+ACS S G+ + GSV+ G+ +D ++ L++M+VK CG ++
Sbjct: 56 FWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIAT--SLVNMYVK-CGFLD 112
Query: 97 SAHRVFEKMQE-------RNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLT 149
A +VF+ + R+V WN M+ + + ++ + F RML+ G PD F+L+
Sbjct: 113 YAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLS 172
Query: 150 SALTA-CAELEL-LSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFN 207
++ C E GKQ+H +++R+ L D + +L+DMY K + +D+ RVF
Sbjct: 173 IVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLS---IDAWRVFV 229
Query: 208 SMPEH-NVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDF 266
+ + NVV W +I G+ GSG + ++ L+ +V +F+ L AC+ +
Sbjct: 230 EIEDKSNVVLWNVMIVGF-GGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENS 288
Query: 267 GFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVI 326
GFG Q+H +K+GL V SL++MY++ G + A F + +K L +V
Sbjct: 289 GFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAY 348
Query: 327 VRDLNSDETLN-HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNL 385
+ L+ + SFT + ++S + +G G+ +HA + K ++
Sbjct: 349 AENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTS 408
Query: 386 SINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEML-- 443
+I +AL+++YSKCG A VF M +++++ W S+ISG K+G +AL++F +M
Sbjct: 409 TIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDD 468
Query: 444 ETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLL 503
+ +KP+ +V +AC+ + + G + SM G+V V + ++D+ + GL
Sbjct: 469 DDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKT-GLVLNVFVGSSLIDLYSKCGLP 527
Query: 504 SEAIEFINSMPLDADAMVWRSLLGSCRVHGN 534
A++ SM + + + W S++ SC N
Sbjct: 528 EMALKVFTSMSTE-NMVAWNSMI-SCYSRNN 556
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 137/501 (27%), Positives = 249/501 (49%), Gaps = 39/501 (7%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYF--SV 60
S RD+ W SM+ + E + F ML G P+ + + + F
Sbjct: 129 SARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREE 188
Query: 61 GRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQER-NVVTWNLMMTR 119
G+ + G +L+ D+ + LIDM+ K I+ A RVF +++++ NVV WN+M+
Sbjct: 189 GKQIHGFMLRNS-LDTDSFLKTALIDMYFKFGLSID-AWRVFVEIEDKSNVVLWNVMIVG 246
Query: 120 FAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALD 179
F G E S+DL+ + + T AL AC++ E G+Q+H V++ GL D
Sbjct: 247 FGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHND 306
Query: 180 LCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFC 239
V SL+ MY+KC + G ++ VF+ + + + W A++A Y + A+ LF
Sbjct: 307 PYVCTSLLSMYSKCGMVG---EAETVFSCVVDKRLEIWNAMVAAYAE-NDYGYSALDLFG 362
Query: 240 DMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSG 299
M Q +V P+ FT S+V+ C+ L + +G+ +H++ K + + + + ++L+ +Y++ G
Sbjct: 363 FMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCG 422
Query: 300 RLECARKCFDLLFEKSLVSCETIVDVIVRD-------------LNSDETLNHETEHTTGI 346
A F + EK +V+ +++ + ++ + D++L +++ T
Sbjct: 423 CDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMT-- 480
Query: 347 GACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQ 406
S T AC A + + G Q+H ++K+G N+ + ++LI +YSKCG E AL+
Sbjct: 481 ---SVTNAC-----AGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALK 532
Query: 407 VFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGL 466
VF M N++ W S+IS ++++ +++LF ML G+ P+ V+ +VL A S
Sbjct: 533 VFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTAS 592
Query: 467 IDEGWKHFNSMRHCHGVVPRV 487
+ +G + HG R+
Sbjct: 593 LLKG-------KSLHGYTLRL 606
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 116/223 (52%), Gaps = 7/223 (3%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR 62
S ++V+W SM+SC++ N++ ++ F ML G +P+ T+ L A S++ G+
Sbjct: 538 STENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGK 597
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
+ G L+ G S + LIDM+VK CG + A +F+KMQ ++++TWNLM+ +
Sbjct: 598 SLHGYTLRLG-IPSDTHLKNALIDMYVK-CGFSKYAENIFKKMQHKSLITWNLMIYGYGS 655
Query: 123 MGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRS-GLALDLC 181
G ++ LF M +G +PD T S ++AC + GK + ++ + G+ ++
Sbjct: 656 HGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNME 715
Query: 182 VGCSLVDMYAKCAVDGSLVDSRRVFNSMP-EHNVVSWTALIAG 223
++VD+ + G L ++ +MP E + W L++
Sbjct: 716 HYANMVDLLGRA---GLLEEAYSFIKAMPIEADSSIWLCLLSA 755
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 347 bits (889), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 203/593 (34%), Positives = 320/593 (53%), Gaps = 12/593 (2%)
Query: 8 VSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGS 67
++W M+ +A+N +AL + ML G P +Y + L+AC+ G+++
Sbjct: 69 IAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSH 128
Query: 68 VLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPE 127
V F + + V L+D + K CG++E A +VF++M +R++V WN M++ F+
Sbjct: 129 V-NCSDFATDMYVCTALVDFYAK-CGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLT 186
Query: 128 DSIDLFFRML-LSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSL 186
D I LF M + G +P+ T+ A L GK +H + R G + DL V +
Sbjct: 187 DVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGI 246
Query: 187 VDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNV 246
+D+YAK ++ +RRVF+ + N V+W+A+I GYV ++ F ++ NV
Sbjct: 247 LDVYAK---SKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNV 303
Query: 247 A-PNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECAR 305
A +L CA D G +H +K G V N++I+ YA+ G L A
Sbjct: 304 AMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAF 363
Query: 306 KCFDLLFEKSLVSCETIVDVIVRDLNSDET--LNHETEHTTGIGACSFTYACLLSGAACI 363
+ F + K ++S +++ V + +E+ L HE T+GI T +L+ + +
Sbjct: 364 RQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMR-TSGIRPDITTLLGVLTACSHL 422
Query: 364 GTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSII 423
+G G H V G+ N SI NAL+ MY+KCG + A +VF+ M R++++W +++
Sbjct: 423 AALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTML 482
Query: 424 SGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSM-RHCHG 482
GF HG +AL LF M ETGV P++VT +A+LSACSH GL+DEG + FNSM R
Sbjct: 483 FGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFN 542
Query: 483 VVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAA 542
V+PR++HY CM D+L R+G L EA +F+N MP + D V +LL +C + N ELG +
Sbjct: 543 VIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVS 602
Query: 543 KMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEV 595
K ++ + +LLSN Y+ ERW D A IR K++ ++K GYSW++V
Sbjct: 603 KK-MQSLGETTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 202 bits (514), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 153/540 (28%), Positives = 265/540 (49%), Gaps = 42/540 (7%)
Query: 45 FTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEK 104
F + L C S +G+V+ +LK S +V L ++ C ++E A VF++
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYAS-CNEVELARHVFDE 60
Query: 105 MQER--NVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLS 162
+ N + W+LM+ +A + E ++DL+++ML SG P ++T L ACA L +
Sbjct: 61 IPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAID 120
Query: 163 VGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIA 222
GK +HS V S A D+ V +LVD YAKC G L + +VF+ MP+ ++V+W A+I+
Sbjct: 121 DGKLIHSHVNCSDFATDMYVCTALVDFYAKC---GELEMAIKVFDEMPKRDMVAWNAMIS 177
Query: 223 GYVRGSGQEQEAMRLFCDMLQ-GNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGL 281
G+ + + LF DM + ++PN T + A G+ +H ++G
Sbjct: 178 GFSLHCCL-TDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGF 236
Query: 282 SAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDET------ 335
S V ++++YA+S + AR+ FDL F+K+ V+ ++ V + E
Sbjct: 237 SNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQ 296
Query: 336 --LNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALIS 393
+N T + +L G A G + G +H VK+GF +L++ N +IS
Sbjct: 297 MLVNDNVAMVTPVAI-----GLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIIS 351
Query: 394 MYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVT 453
Y+K G+ A + F+++G ++VI++ S+I+G + ++ LF+EM +G++P+ T
Sbjct: 352 FYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITT 411
Query: 454 YIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYA-------CMVDVLGRSGLLSEA 506
+ VL+ACSH+ + G CHG V YA ++D+ + G L A
Sbjct: 412 LLGVLTACSHLAALGHG-------SSCHGYCV-VHGYAVNTSICNALMDMYTKCGKLDVA 463
Query: 507 IEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMI--LEREPHDPATYILLSNLYA 564
++M D + W ++L +HG LG+ A + ++ +P LL+ L A
Sbjct: 464 KRVFDTMH-KRDIVSWNTMLFGFGIHG---LGKEALSLFNSMQETGVNPDEVTLLAILSA 519
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 204/417 (48%), Gaps = 18/417 (4%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLE-HGFYPNEYCFTAALRACSNSLYFSVGR 62
KRD+V+W +M+S F+ + + + FLDM G PN A + G+
Sbjct: 166 KRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGK 225
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKG-CGDIESAHRVFEKMQERNVVTWNLMMTRFA 121
V G + G F + + V ++D++ K C I A RVF+ ++N VTW+ M+ +
Sbjct: 226 AVHGYCTRMG-FSNDLVVKTGILDVYAKSKC--IIYARRVFDLDFKKNEVTWSAMIGGYV 282
Query: 122 QMGYPEDSIDLFFRMLLSG----YTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLA 177
+ +++ ++FF+ML++ TP L L CA LS G+ +H + +++G
Sbjct: 283 ENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLI--LMGCARFGDLSGGRCVHCYAVKAGFI 340
Query: 178 LDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRL 237
LDL V +++ YAK GSL D+ R F+ + +V+S+ +LI G V + +E+ RL
Sbjct: 341 LDLTVQNTIISFYAKY---GSLCDAFRQFSEIGLKDVISYNSLITGCVVNC-RPEESFRL 396
Query: 238 FCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYAR 297
F +M + P+ T VL AC++L G G H + G + + N+L++MY +
Sbjct: 397 FHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTK 456
Query: 298 SGRLECARKCFDLLFEKSLVSCETIV-DVIVRDLNSDETLNHETEHTTGIGACSFTYACL 356
G+L+ A++ FD + ++ +VS T++ + L + + TG+ T +
Sbjct: 457 CGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAI 516
Query: 357 LSGAACIGTIGKGEQIHALVVKSGFETNLSIN--NALISMYSKCGNKEAALQVFNDM 411
LS + G + +G+Q+ + + F I+ N + + ++ G + A N M
Sbjct: 517 LSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKM 573
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 342 bits (878), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 199/595 (33%), Positives = 327/595 (54%), Gaps = 41/595 (6%)
Query: 87 MFVKGC----GDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYT 142
+FV C G + A+++F K+ E +VV WN M+ ++++ + + L+ ML G T
Sbjct: 72 LFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVT 131
Query: 143 PDRFTLTSALTACA-ELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVD 201
PD T L + L+ GK+LH V++ GL +L V +LV MY+ C G +
Sbjct: 132 PDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLC---GLMDM 188
Query: 202 SRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACA 261
+R VF+ + +V SW +I+GY R + +E++ L +M + V+P T VL AC+
Sbjct: 189 ARGVFDRRCKEDVFSWNLMISGYNRMK-EYEESIELLVEMERNLVSPTSVTLLLVLSACS 247
Query: 262 NLPDFGFGEQLHS--------QTIKLGLSAVNCVA-----------------------NS 290
+ D +++H +++L + VN A S
Sbjct: 248 KVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTS 307
Query: 291 LINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETE-HTTGIGAC 349
++ Y G L+ AR FD + + +S ++D +R +E+L E + G+
Sbjct: 308 IVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPD 367
Query: 350 SFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFN 409
FT +L+ A +G++ GE I + K+ + ++ + NALI MY KCG E A +VF+
Sbjct: 368 EFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFH 427
Query: 410 DMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDE 469
DM R+ TWT+++ G A +G +A+++F++M + ++P+D+TY+ VLSAC+H G++D+
Sbjct: 428 DMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQ 487
Query: 470 GWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSC 529
K F MR H + P + HY CMVD+LGR+GL+ EA E + MP++ +++VW +LLG+
Sbjct: 488 ARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGAS 547
Query: 530 RVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAG 589
R+H + + E AAK ILE EP + A Y LL N+YA +RW D+ +R+ + I K G
Sbjct: 548 RLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPG 607
Query: 590 YSWIEVENQVHKFHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTDFVLHDVED 644
+S IEV H+F GD SH Q+++IY +L+ELA + Y+P+T +L + D
Sbjct: 608 FSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQESTFAAYLPDTSELLFEAGD 662
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 144/290 (49%), Gaps = 41/290 (14%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
K D+ SW M+S + E++ ++M + P L ACS + +
Sbjct: 198 KEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKR 257
Query: 64 V--FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTW-------- 113
V + S KT + + + L++ + CG+++ A R+F M+ R+V++W
Sbjct: 258 VHEYVSECKT---EPSLRLENALVNAYA-ACGEMDIAVRIFRSMKARDVISWTSIVKGYV 313
Query: 114 ---NLMMTR--FAQM-------------GYPE-----DSIDLFFRMLLSGYTPDRFTLTS 150
NL + R F QM GY +S+++F M +G PD FT+ S
Sbjct: 314 ERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVS 373
Query: 151 ALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMP 210
LTACA L L +G+ + +++ ++ + D+ VG +L+DMY KC G +++VF+ M
Sbjct: 374 VLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKC---GCSEKAQKVFHDMD 430
Query: 211 EHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKAC 260
+ + +WTA++ G + +GQ QEA+++F M ++ P+ T+ VL AC
Sbjct: 431 QRDKFTWTAMVVG-LANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSAC 479
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 110/228 (48%), Gaps = 21/228 (9%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
RD +SW M+ + +E+L F +M G P+E+ + L AC++ +G +
Sbjct: 331 RDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAH-----LGSLE 385
Query: 65 FGSVLKTGYFDSH-----VSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTR 119
G +KT Y D + V VG LIDM+ K CG E A +VF M +R+ TW M+
Sbjct: 386 IGEWIKT-YIDKNKIKNDVVVGNALIDMYFK-CGCSEKAQKVFHDMDQRDKFTWTAMVVG 443
Query: 120 FAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALD 179
A G +++I +FF+M PD T L+AC ++ ++ + +RS ++
Sbjct: 444 LANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFA-KMRSDHRIE 502
Query: 180 LCV---GCSLVDMYAKCAVDGSLVDSRRVFNSMPEH-NVVSWTALIAG 223
+ GC +VDM + G + ++ + MP + N + W AL+
Sbjct: 503 PSLVHYGC-MVDMLGRA---GLVKEAYEILRKMPMNPNSIVWGALLGA 546
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 342 bits (877), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 170/446 (38%), Positives = 269/446 (60%), Gaps = 5/446 (1%)
Query: 279 LGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN- 337
L LS C N +I + G A+K ++++++ ++ VR++ +E L
Sbjct: 92 LSLSPGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKA 151
Query: 338 -HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYS 396
T I F++A L+ A +G + + +H+L++ SG E N +++AL+ +Y+
Sbjct: 152 LKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYA 211
Query: 397 KCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIA 456
KCG+ + +VF + +V W ++I+GFA HG AT+A+ +F EM V P+ +T++
Sbjct: 212 KCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLG 271
Query: 457 VLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLD 516
+L+ CSH GL++EG ++F M + P++EHY MVD+LGR+G + EA E I SMP++
Sbjct: 272 LLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIE 331
Query: 517 ADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIR 576
D ++WRSLL S R + N ELGE A + + + + D Y+LLSN+Y++ ++W +R
Sbjct: 332 PDVVIWRSLLSSSRTYKNPELGEIAIQNLSKAKSGD---YVLLSNIYSSTKKWESAQKVR 388
Query: 577 KTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTD 636
+ M ++ I K G SW+E +H+F GDTSH + + IY L+ L K K G+V +TD
Sbjct: 389 ELMSKEGIRKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTD 448
Query: 637 FVLHDVEDEQKEQYLFQHSEKIAVAFALISIPNPKPIRIFKNLRVCGDCHTAIKYISKVT 696
VL DV +E+KE+ L HSEK+A+A+ ++ IRI KN+R+C DCH IK +SK+
Sbjct: 449 LVLMDVSEEEKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLL 508
Query: 697 GRVIVVRDANRFHHIKDGTCSCNDYW 722
RVI++RD RFH +DG CSC DYW
Sbjct: 509 NRVIIMRDRIRFHRFEDGLCSCRDYW 534
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 125/231 (54%), Gaps = 13/231 (5%)
Query: 34 LEHGFYPNEYCFT-AALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGC 92
L +G YP+ T AA R C+ S Y + +++ L G + ++ +I+ +K
Sbjct: 59 LGYGTYPSLLVSTVAAYRRCNRS-YLARRLLLWFLSLSPGVCNINL-----IIESLMK-I 111
Query: 93 GDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRML-LSGYTPDRFTLTSA 151
G+ A +V ++NV+TWNLM+ + + E+++ ML + P++F+ S+
Sbjct: 112 GESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASS 171
Query: 152 LTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPE 211
L ACA L L K +HS +I SG+ L+ + +LVD+YAKC G + SR VF S+
Sbjct: 172 LAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKC---GDIGTSREVFYSVKR 228
Query: 212 HNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACAN 262
++V W A+I G+ G EA+R+F +M +V+P+ TF +L C++
Sbjct: 229 NDVSIWNAMITGFA-THGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSH 278
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 109/224 (48%), Gaps = 8/224 (3%)
Query: 2 GSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEH-GFYPNEYCFTAALRACSNSLYFSV 60
S +++++W M+ + N EAL +ML PN++ F ++L AC+
Sbjct: 124 ASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHH 183
Query: 61 GRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRF 120
+ V ++ +G + + + L+D++ K CGDI ++ VF ++ +V WN M+T F
Sbjct: 184 AKWVHSLMIDSG-IELNAILSSALVDVYAK-CGDIGTSREVFYSVKRNDVSIWNAMITGF 241
Query: 121 AQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRS-GLALD 179
A G ++I +F M +PD T LT C+ LL GK+ + R +
Sbjct: 242 ATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPK 301
Query: 180 LCVGCSLVDMYAKCAVDGSLVDSRRVFNSMP-EHNVVSWTALIA 222
L ++VD+ + G + ++ + SMP E +VV W +L++
Sbjct: 302 LEHYGAMVDLLGRA---GRVKEAYELIESMPIEPDVVIWRSLLS 342
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 114/230 (49%), Gaps = 11/230 (4%)
Query: 202 SRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQ-GNVAPNGFTFSSVLKAC 260
+++V + + NV++W +I GYVR Q +EA++ +ML ++ PN F+F+S L AC
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNV-QYEEALKALKNMLSFTDIKPNKFSFASSLAAC 175
Query: 261 ANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCE 320
A L D + +HS I G+ ++++L+++YA+ G + +R+ F + +
Sbjct: 176 ARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWN 235
Query: 321 TIVDVIVRDLNSDETLN----HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALV 376
++ + E + E EH + S T+ LL+ + G + +G++ L+
Sbjct: 236 AMITGFATHGLATEAIRVFSEMEAEH---VSPDSITFLGLLTTCSHCGLLEEGKEYFGLM 292
Query: 377 VKS-GFETNLSINNALISMYSKCGNKEAALQVFNDMG-DRNVITWTSIIS 424
+ + L A++ + + G + A ++ M + +V+ W S++S
Sbjct: 293 SRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 342 bits (876), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 207/650 (31%), Positives = 357/650 (54%), Gaps = 18/650 (2%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
++++V+W +++S + EA F M+ P+ F A S S V
Sbjct: 176 RKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANV 235
Query: 64 VFGSVLKTGYFDSHVS---VGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRF 120
+G +LK G D +V V I M+ + GDIES+ RVF+ ERN+ WN M+ +
Sbjct: 236 FYGLMLKLG--DEYVKDLFVVSSAISMYAE-LGDIESSRRVFDSCVERNIEVWNTMIGVY 292
Query: 121 AQMGYPEDSIDLFFRMLLSG-YTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALD 179
Q +SI+LF + S D T A +A + L+ + +G+Q H +V ++ L
Sbjct: 293 VQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELP 352
Query: 180 LCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFC 239
+ + SL+ MY++C GS+ S VF SM E +VVSW +I+ +V+ +G + E + L
Sbjct: 353 IVIVNSLMVMYSRC---GSVHKSFGVFLSMRERDVVSWNTMISAFVQ-NGLDDEGLMLVY 408
Query: 240 DMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSG 299
+M + + T +++L A +NL + G+Q H+ I+ G+ + + LI+MY++SG
Sbjct: 409 EMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQ-FEGMNSYLIDMYSKSG 467
Query: 300 RLECARKCFDL--LFEKSLVSCETIVDVIVRDLNSDET-LNHETEHTTGIGACSFTYACL 356
+ ++K F+ E+ + +++ ++ ++++T L I + T A +
Sbjct: 468 LIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASI 527
Query: 357 LSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNV 416
L + IG++ G+Q+H ++ + N+ + +AL+ MYSK G + A +F+ +RN
Sbjct: 528 LPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNS 587
Query: 417 ITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNS 476
+T+T++I G+ +HG +A+ LF M E+G+KP+ +T++AVLSACS+ GLIDEG K F
Sbjct: 588 VTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEE 647
Query: 477 MRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDAD-AMVWRSLLGSCRVHGNT 535
MR + + P EHY C+ D+LGR G ++EA EF+ + + + A +W SLLGSC++HG
Sbjct: 648 MREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGEL 707
Query: 536 ELGEHAAKMI--LEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWI 593
EL E ++ + ++ + +LLSN+YA E++W V +R+ M++K + KE G S I
Sbjct: 708 ELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGI 767
Query: 594 EVENQVHKFHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTDFVLHDVE 643
E+ V+ F D HP + +IYD +D LA ++ ++ V +E
Sbjct: 768 EIAGYVNCFVSRDQEHPHSSEIYDVIDGLAKDMRGDSFLTTLPTVTPSLE 817
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 146/562 (25%), Positives = 262/562 (46%), Gaps = 36/562 (6%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPN--EYCFTAALRACSNSLYFSVG 61
K V W +++ F N++ HEAL+ + M + + N Y +++ L+AC+ + G
Sbjct: 67 KPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAG 126
Query: 62 RVVFGSVLKTGYFDSHVSVGCELIDMFVK-----GCGDIESAHRVFEKMQERNVVTWNLM 116
+ V +++ S V V L++M+V C + + +VF+ M+ +NVV WN +
Sbjct: 127 KAVHCHLIRCLQNSSRV-VHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTL 185
Query: 117 MTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSG- 175
++ + + G ++ F M+ P + + A + + + +++ G
Sbjct: 186 ISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGD 245
Query: 176 -LALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEA 234
DL V S + MYA+ G + SRRVF+S E N+ W +I YV+ E+
Sbjct: 246 EYVKDLFVVSSAISMYAEL---GDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCL-VES 301
Query: 235 MRLFCDML-QGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLIN 293
+ LF + + + + T+ A + L G Q H K + NSL+
Sbjct: 302 IELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMV 361
Query: 294 MYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETE-HTTGIGACSFT 352
MY+R G + + F + E+ +VS T++ V++ DE L E G T
Sbjct: 362 MYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYIT 421
Query: 353 YACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMG 412
LLS A+ + G+Q HA +++ G + +N+ LI MYSK G + ++F G
Sbjct: 422 VTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYSKSGLIRISQKLFEGSG 480
Query: 413 --DRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEG 470
+R+ TW S+ISG+ ++G+ K +F +MLE ++PN VT ++L ACS +G +D G
Sbjct: 481 YAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLG 540
Query: 471 WKHFNSMRHCHGVVPR------VEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRS 524
+ HG R V + +VD+ ++G + A E + S + +++ + +
Sbjct: 541 -------KQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYA-EDMFSQTKERNSVTYTT 592
Query: 525 LLGSCRVHGNTELGEHAAKMIL 546
++ HG +GE A + L
Sbjct: 593 MILGYGQHG---MGERAISLFL 611
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 138/465 (29%), Positives = 228/465 (49%), Gaps = 35/465 (7%)
Query: 93 GDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSG-YTP-DRFTLTS 150
G+ + A ++F+ + + V WN ++ F P +++ + RM + +T D +T +S
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 151 ALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKC--AVDGSLVD-SRRVFN 207
L ACAE + L GK +H +IR V SL++MY C A D D R+VF+
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFD 172
Query: 208 SMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFG 267
+M NVV+W LI+ YV+ +G+ EA R F M++ V P+ +F +V A +
Sbjct: 173 NMRRKNVVAWNTLISWYVK-TGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIK 231
Query: 268 FGEQLHSQTIKLGLSAVN--CVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDV 325
+ +KLG V V +S I+MYA G +E +R+ FD E+++ T++ V
Sbjct: 232 KANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGV 291
Query: 326 IVRD--LNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFET 383
V++ L L E + I + TY S + + + G Q H V K+ E
Sbjct: 292 YVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFREL 351
Query: 384 NLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEML 443
+ I N+L+ MYS+CG+ + VF M +R+V++W ++IS F ++G + L L YEM
Sbjct: 352 PIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQ 411
Query: 444 ETGVKPNDVTYIAVLSACS-----------HVGLIDEGWKHFNSMRHCHGVVPRVEHYAC 492
+ G K + +T A+LSA S H LI +G + F M +
Sbjct: 412 KQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQ-FEGMN------------SY 458
Query: 493 MVDVLGRSGLLSEAIE-FINSMPLDADAMVWRSLLGSCRVHGNTE 536
++D+ +SGL+ + + F S + D W S++ +G+TE
Sbjct: 459 LIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTE 503
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 154/316 (48%), Gaps = 24/316 (7%)
Query: 185 SLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQG 244
S+ +K DG+ +R++F+++P+ V W +I G++ + EA+ + M +
Sbjct: 41 SIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFI-CNNLPHEALLFYSRMKK- 98
Query: 245 NVAP----NGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYAR--- 297
AP + +T+SS LKACA + G+ +H I+ ++ V NSL+NMY
Sbjct: 99 -TAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLN 157
Query: 298 ---SGRLECARKCFDLLFEKSLVSCETIVDVIVRD-LNSDETLNHETEHTTGIGACSFTY 353
+ RK FD + K++V+ T++ V+ N++ + ++
Sbjct: 158 APDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSF 217
Query: 354 ACLLSGAACIGTIGKGEQIHALVVKSGFE--TNLSINNALISMYSKCGNKEAALQVFNDM 411
+ + +I K + L++K G E +L + ++ ISMY++ G+ E++ +VF+
Sbjct: 218 VNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSC 277
Query: 412 GDRNVITWTSIISGFAKHGYATKALELFYEMLETG-VKPNDVTYIAVLSACSHVGLIDEG 470
+RN+ W ++I + ++ +++ELF E + + + ++VTY+ SA S + ++ G
Sbjct: 278 VERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELG 337
Query: 471 WKHFNSMRHCHGVVPR 486
R HG V +
Sbjct: 338 -------RQFHGFVSK 346
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 2/165 (1%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR 62
++RD +W SM+S + N + + F MLE PN + L ACS +G+
Sbjct: 482 AERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGK 541
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
+ G ++ Y D +V V L+DM+ K G I+ A +F + +ERN VT+ M+ + Q
Sbjct: 542 QLHGFSIRQ-YLDQNVFVASALVDMYSKA-GAIKYAEDMFSQTKERNSVTYTTMILGYGQ 599
Query: 123 MGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQL 167
G E +I LF M SG PD T + L+AC+ L+ G ++
Sbjct: 600 HGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKI 644
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 341 bits (874), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 203/620 (32%), Positives = 343/620 (55%), Gaps = 11/620 (1%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
RDLV+W +++S N +AL F M++ G P+ + + C+ + R V
Sbjct: 165 RDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSV 224
Query: 65 FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG 124
G + + FD ++ L+ M+ K CGD+ S+ R+FEK+ ++N V+W M++ + +
Sbjct: 225 HGQITRK-MFDLDETLCNSLLTMYSK-CGDLLSSERIFEKIAKKNAVSWTAMISSYNRGE 282
Query: 125 YPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDL-CVG 183
+ E ++ F M+ SG P+ TL S L++C + L+ GK +H + +R L + +
Sbjct: 283 FSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLS 342
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQ 243
+LV++YA+C G L D V + + N+V+W +LI+ Y G +A+ LF M+
Sbjct: 343 LALVELYAEC---GKLSDCETVLRVVSDRNIVAWNSLISLYAH-RGMVIQALGLFRQMVT 398
Query: 244 GNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLEC 303
+ P+ FT +S + AC N G+Q+H I+ +S V NSLI+MY++SG ++
Sbjct: 399 QRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSD-EFVQNSLIDMYSKSGSVDS 457
Query: 304 ARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGAAC 362
A F+ + +S+V+ +++ ++ NS E ++ + + + + T+ ++ +
Sbjct: 458 ASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSS 517
Query: 363 IGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSI 422
IG++ KG+ +H ++ SG + +L + ALI MY+KCG+ AA VF M R++++W+S+
Sbjct: 518 IGSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSM 576
Query: 423 ISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHG 482
I+ + HG A+ F +M+E+G KPN+V ++ VLSAC H G ++EG +FN M+ G
Sbjct: 577 INAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMK-SFG 635
Query: 483 VVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAA 542
V P EH+AC +D+L RSG L EA I MP ADA VW SL+ CR+H ++ +
Sbjct: 636 VSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIK 695
Query: 543 KMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKF 602
+ + D Y LLSN+YA E W + +R MK + K GYS IE++ +V +F
Sbjct: 696 NDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRF 755
Query: 603 HVGDTSHPQAQKIYDELDEL 622
G+ + Q +IY L L
Sbjct: 756 GAGEENRIQTDEIYRFLGNL 775
Score = 215 bits (548), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 148/535 (27%), Positives = 272/535 (50%), Gaps = 42/535 (7%)
Query: 41 NEYCFTAALRACSNSL-YFSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAH 99
+++ F + LRAC+ S + SVG V G ++K G D V + L+ M+ + G++ A
Sbjct: 99 SKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAV-IETSLLCMYGQ-TGNLSDAE 156
Query: 100 RVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELE 159
+VF+ M R++V W+ +++ + G ++ +F M+ G PD T+ S + CAEL
Sbjct: 157 KVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELG 216
Query: 160 LLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTA 219
L + + +H + R LD + SL+ MY+KC G L+ S R+F + + N VSWTA
Sbjct: 217 CLRIARSVHGQITRKMFDLDETLCNSLLTMYSKC---GDLLSSERIFEKIAKKNAVSWTA 273
Query: 220 LIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKL 279
+I+ Y RG E+ A+R F +M++ + PN T SVL +C + G+ +H ++
Sbjct: 274 MISSYNRGEFSEK-ALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRR 332
Query: 280 GLSA-VNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNH 338
L ++ +L+ +YA G+L ++ ++++V+ +++ + + L
Sbjct: 333 ELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGL 392
Query: 339 ETEHTTG-IGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSK 397
+ T I +FT A +S G + G+QIH V+++ + N+LI MYSK
Sbjct: 393 FRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEF-VQNSLIDMYSK 451
Query: 398 CGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAV 457
G+ ++A VFN + R+V+TW S++ GF+++G + +A+ LF M + ++ N+VT++AV
Sbjct: 452 SGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAV 511
Query: 458 LSACSHVGLIDEG-WKH----FNSMRHCHGVVPRVEHYA--------------------- 491
+ ACS +G +++G W H + ++ ++ YA
Sbjct: 512 IQACSSIGSLEKGKWVHHKLIISGLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIV 571
Query: 492 ---CMVDVLGRSGLLSEAIEFINSM---PLDADAMVWRSLLGSCRVHGNTELGEH 540
M++ G G + AI N M + +V+ ++L +C G+ E G++
Sbjct: 572 SWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKY 626
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/451 (27%), Positives = 221/451 (49%), Gaps = 20/451 (4%)
Query: 93 GDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSAL 152
G +S+ VFE + + +++ + +IDL+ R++ +F S L
Sbjct: 48 GSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVL 107
Query: 153 TACA-ELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPE 211
ACA E LSVG ++H +I+ G+ D + SL+ MY + G+L D+ +VF+ MP
Sbjct: 108 RACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQT---GNLSDAEKVFDGMPV 164
Query: 212 HNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQ 271
++V+W+ L++ + +G+ +A+R+F M+ V P+ T SV++ CA L
Sbjct: 165 RDLVAWSTLVSSCLE-NGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARS 223
Query: 272 LHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLN 331
+H Q + + NSL+ MY++ G L + + F+ + +K+ VS ++ R
Sbjct: 224 VHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEF 283
Query: 332 SDETLNHETEH-TTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNL-SINN 389
S++ L +E +GI T +LS IG I +G+ +H V+ + N S++
Sbjct: 284 SEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSL 343
Query: 390 ALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKP 449
AL+ +Y++CG V + DRN++ W S+IS +A G +AL LF +M+ +KP
Sbjct: 344 ALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKP 403
Query: 450 NDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVE-----HYACMVDVLGRSGLLS 504
+ T + +SAC + GL+ G + HG V R + ++D+ +SG +
Sbjct: 404 DAFTLASSISACENAGLVPLG-------KQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVD 456
Query: 505 EAIEFINSMPLDADAMVWRSLLGSCRVHGNT 535
A N + + W S+L +GN+
Sbjct: 457 SASTVFNQIK-HRSVVTWNSMLCGFSQNGNS 486
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 127/483 (26%), Positives = 237/483 (49%), Gaps = 24/483 (4%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR 62
+K++ VSW +M+S + +AL +F +M++ G PN + L +C G+
Sbjct: 264 AKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGK 323
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
V G ++ ++ S+ L++++ + CG + V + +RN+V WN +++ +A
Sbjct: 324 SVHGFAVRRELDPNYESLSLALVELYAE-CGKLSDCETVLRVVSDRNIVAWNSLISLYAH 382
Query: 123 MGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCV 182
G ++ LF +M+ PD FTL S+++AC L+ +GKQ+H VIR+ ++ D V
Sbjct: 383 RGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS-DEFV 441
Query: 183 GCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDML 242
SL+DMY+K GS+ + VFN + +VV+W +++ G+ + +G EA+ LF M
Sbjct: 442 QNSLIDMYSK---SGSVDSASTVFNQIKHRSVVTWNSMLCGFSQ-NGNSVEAISLFDYMY 497
Query: 243 QGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLE 302
+ N TF +V++AC+++ G+ +H + I GL + +LI+MYA+ G L
Sbjct: 498 HSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDL-FTDTALIDMYAKCGDLN 556
Query: 303 CARKCFDLLFEKSLVSCETIVDVI---VRDLNSDETLNHETEHTTGIGACSFTYACLLSG 359
A F + +S+VS ++++ R ++ T N E +G + +LS
Sbjct: 557 AAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVE--SGTKPNEVVFMNVLSA 614
Query: 360 AACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDM---GDRNV 416
G++ +G+ L+ G N I + S+ G+ + A + +M D +V
Sbjct: 615 CGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASV 674
Query: 417 ITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEG-WKHFN 475
W S+++G H + ++ + + +D Y +LS +EG W+ F
Sbjct: 675 --WGSLVNGCRIHQKMDIIKAIKNDL--SDIVTDDTGYYTLLSNI----YAEEGEWEEFR 726
Query: 476 SMR 478
+R
Sbjct: 727 RLR 729
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 112/244 (45%), Gaps = 27/244 (11%)
Query: 253 FSSVLKACANLPDFGFGEQLHSQTIKLG-LSAVNCVANSLINMYARSGRLECARKCF--- 308
+ + ++C++L QLH+ + G L LI YA G + +R F
Sbjct: 4 YMPLFRSCSSLR---LVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAF 60
Query: 309 ---DLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGT 365
D L+ C ++ ++ L ET + F + +L AC G+
Sbjct: 61 PYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQIS-----KFVFPSVLR--ACAGS 113
Query: 366 ---IGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSI 422
+ G ++H ++K G + + I +L+ MY + GN A +VF+ M R+++ W+++
Sbjct: 114 REHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTL 173
Query: 423 ISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHG 482
+S ++G KAL +F M++ GV+P+ VT I+V+ C+ +G + R HG
Sbjct: 174 VSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCL-------RIARSVHG 226
Query: 483 VVPR 486
+ R
Sbjct: 227 QITR 230
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 332 bits (850), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 206/629 (32%), Positives = 342/629 (54%), Gaps = 23/629 (3%)
Query: 5 RDLVSWCSMMSCFANNS-MEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
R++VS+ ++ S ++ N A M PN FT+ ++ C+ +G
Sbjct: 161 RNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSS 220
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
+ ++K GY D +V V ++ M+ CGD+ESA R+F+ + R+ V WN M+ +
Sbjct: 221 LNSQIIKLGYSD-NVVVQTSVLGMY-SSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKN 278
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVG 183
ED + F ML+SG P +FT + L C++L S+GK +H+ +I S DL +
Sbjct: 279 DKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLD 338
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQ 243
+L+DMY C G + ++ VF + N+VSW ++I+G +G ++AM ++ +L+
Sbjct: 339 NALLDMYCSC---GDMREAFYVFGRIHNPNLVSWNSIISG-CSENGFGEQAMLMYRRLLR 394
Query: 244 GNVA-PNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLE 302
+ P+ +TFS+ + A A F G+ LH Q KLG V +L++MY ++ E
Sbjct: 395 MSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAE 454
Query: 303 CARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN------HETEHTTGIGACSFTYACL 356
A+K FD++ E+ +V ++ R NS+ + E + G S AC
Sbjct: 455 SAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGAC- 513
Query: 357 LSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNV 416
+ + + +GE H L +++GF+ +S+ AL+ MY K G E A +F+ + ++
Sbjct: 514 ----SDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDL 569
Query: 417 ITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNS 476
W S++ +++HG KAL F ++LE G P+ VTY+++L+ACSH G +G +N
Sbjct: 570 KCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQ 629
Query: 477 MRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFI-NSMPLDADAMVWRSLLGSCRVHGNT 535
M+ G+ +HY+CMV+++ ++GL+ EA+E I S P + A +WR+LL +C N
Sbjct: 630 MKE-QGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNL 688
Query: 536 ELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEV 595
++G +AA+ IL+ +P D AT+ILLSNLYA RW DVA +R+ ++ K+ G SWIEV
Sbjct: 689 QIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEV 748
Query: 596 -ENQVHKFHVGDTSHPQ-AQKIYDELDEL 622
N F GD S+P+ + DEL+ L
Sbjct: 749 NNNNTQVFSSGDQSNPEVVSQAQDELNRL 777
Score = 192 bits (489), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 125/394 (31%), Positives = 201/394 (51%), Gaps = 21/394 (5%)
Query: 84 LIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPED---------SIDLFF 134
LI M+V+ C +E A +VF+KM +RN+VT + F + S + F
Sbjct: 28 LISMYVR-CSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMIF 86
Query: 135 RMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLAL---DLCVGCSLVDMYA 191
M L+ LT C + +L +Q+H+ V+ +G +L+ MY
Sbjct: 87 FMPLNEIASSVVELTRK---CVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYV 143
Query: 192 KCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGF 251
+C GSL +R+VF+ MP NVVS+ AL + Y R A L M V PN
Sbjct: 144 RC---GSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSS 200
Query: 252 TFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLL 311
TF+S+++ CA L D G L+SQ IKLG S V S++ MY+ G LE AR+ FD +
Sbjct: 201 TFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCV 260
Query: 312 FEKSLVSCET-IVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGE 370
+ V+ T IV + D D + +G+ FTY+ +L+G + +G+ G+
Sbjct: 261 NNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGK 320
Query: 371 QIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHG 430
IHA ++ S +L ++NAL+ MY CG+ A VF + + N+++W SIISG +++G
Sbjct: 321 LIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENG 380
Query: 431 YATKALELFYEMLETGV-KPNDVTYIAVLSACSH 463
+ +A+ ++ +L +P++ T+ A +SA +
Sbjct: 381 FGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAE 414
Score = 165 bits (418), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 216/427 (50%), Gaps = 10/427 (2%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR 62
+ RD V+W +M+ N + L+ F +ML G P ++ ++ L CS +S+G+
Sbjct: 261 NNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGK 320
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
++ ++ + + + + L+DM+ CGD+ A VF ++ N+V+WN +++ ++
Sbjct: 321 LIHARIIVSDSL-ADLPLDNALLDMYC-SCGDMREAFYVFGRIHNPNLVSWNSIISGCSE 378
Query: 123 MGYPEDSIDLFFRML-LSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLC 181
G+ E ++ ++ R+L +S PD +T ++A++A AE E GK LH V + G +
Sbjct: 379 NGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVF 438
Query: 182 VGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDM 241
VG +L+ MY K + +++VF+ M E +VV WT +I G+ R G + A++ F +M
Sbjct: 439 VGTTLLSMYFK---NREAESAQKVFDVMKERDVVLWTEMIVGHSR-LGNSELAVQFFIEM 494
Query: 242 LQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRL 301
+ +GF+ SSV+ AC+++ GE H I+ G V V +L++MY ++G+
Sbjct: 495 YREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKY 554
Query: 302 ECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGA 360
E A F L L +++ + ++ L+ E G + TY LL+
Sbjct: 555 ETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAAC 614
Query: 361 ACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDM--GDRNVIT 418
+ G+ +G+ + + + G + + ++++ SK G + AL++ G+
Sbjct: 615 SHRGSTLQGKFLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAEL 674
Query: 419 WTSIISG 425
W +++S
Sbjct: 675 WRTLLSA 681
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 328 bits (842), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 216/729 (29%), Positives = 356/729 (48%), Gaps = 88/729 (12%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
+RD+++W S++ + N EA+ +M + G P +
Sbjct: 244 ERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPG---------------------L 282
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQE----RNVVTWNLMMTR 119
V ++L GY G ++A + +KM+ +V TW M++
Sbjct: 283 VTWNILIGGY----------------NQLGKCDAAMDLMQKMETFGITADVFTWTAMISG 326
Query: 120 FAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALD 179
G ++D+F +M L+G P+ T+ SA++AC+ L++++ G ++HS ++ G D
Sbjct: 327 LIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDD 386
Query: 180 LCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFC 239
+ VG SLVDMY+KC G L D+R+VF+S+ +V +W ++I GY + +G +A LF
Sbjct: 387 VLVGNSLVDMYSKC---GKLEDARKVFDSVKNKDVYTWNSMITGYCQ-AGYCGKAYELFT 442
Query: 240 DMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVA-NSLINMYARS 298
M N+ PN T+++++ D G L + K G N N +I Y ++
Sbjct: 443 RMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQN 502
Query: 299 GRLECARKCF-DLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLL 357
G+ + A + F + F + + + TI+ ++
Sbjct: 503 GKKDEALELFRKMQFSRFMPNSVTILSLL------------------------------- 531
Query: 358 SGAACIGTIGKG--EQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRN 415
AC +G +IH V++ + ++ NAL Y+K G+ E + +F M ++
Sbjct: 532 --PACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKD 589
Query: 416 VITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFN 475
+ITW S+I G+ HG AL LF +M G+ PN T +++ A +G +DEG K F
Sbjct: 590 IITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFY 649
Query: 476 SMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNT 535
S+ + + ++P +EH + MV + GR+ L EA++FI M + ++ +W S L CR+HG+
Sbjct: 650 SIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDI 709
Query: 536 ELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEV 595
++ HAA+ + EP + AT ++S +YA + K + + K G SWIEV
Sbjct: 710 DMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEV 769
Query: 596 ENQVHKFHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTDFVLHDVEDEQKEQYLFQHS 655
N +H F GD Q++ D L L K+ +L + +E+E +E+ HS
Sbjct: 770 RNLIHTFTTGD----QSKLCTDVLYPLVEKMSRLDNRSDQYNGELWIEEEGREETCGIHS 825
Query: 656 EKIAVAFALISI--PNPKPIRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHIKD 713
EK A+AF LIS + IRI KNLR+C DCH KY+SK G I++ D HH K+
Sbjct: 826 EKFAMAFGLISSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCDILLEDTRCLHHFKN 885
Query: 714 GTCSCNDYW 722
G CSC DYW
Sbjct: 886 GDCSCKDYW 894
Score = 180 bits (457), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 132/509 (25%), Positives = 235/509 (46%), Gaps = 42/509 (8%)
Query: 25 EALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVLKTGYF-DSHVSVGCE 83
EA + + G + L +C +S +GR++ + G F + V V +
Sbjct: 64 EAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHA---RFGLFTEPDVFVETK 120
Query: 84 LIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTP 143
L+ M+ K CG I A +VF+ M+ERN+ TW+ M+ +++ + LF M+ G P
Sbjct: 121 LLSMYAK-CGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLP 179
Query: 144 DRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSR 203
D F L CA + GK +HS VI+ G++ L V S++ +YAKC G L +
Sbjct: 180 DDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKC---GELDFAT 236
Query: 204 RVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANL 263
+ F M E +V++W +++ Y + +G+ +EA+ L +M + ++P T++ ++ L
Sbjct: 237 KFFRRMRERDVIAWNSVLLAYCQ-NGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQL 295
Query: 264 PDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIV 323
L + G++A ++I+ +G A F +F +V +
Sbjct: 296 GKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTI 355
Query: 324 DVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFET 383
+ + ACS C+ I +G ++H++ VK GF
Sbjct: 356 -------------------MSAVSACS-----------CLKVINQGSEVHSIAVKMGFID 385
Query: 384 NLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEML 443
++ + N+L+ MYSKCG E A +VF+ + +++V TW S+I+G+ + GY KA ELF M
Sbjct: 386 DVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQ 445
Query: 444 ETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLL 503
+ ++PN +T+ ++S G E F M V + ++ ++G
Sbjct: 446 DANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKK 505
Query: 504 SEAIEFINSMPLD---ADAMVWRSLLGSC 529
EA+E M +++ SLL +C
Sbjct: 506 DEALELFRKMQFSRFMPNSVTILSLLPAC 534
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 201/432 (46%), Gaps = 39/432 (9%)
Query: 2 GSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVG 61
G D+ +W +M+S +N M ++AL F M G PN +A+ ACS + G
Sbjct: 312 GITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQG 371
Query: 62 RVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFA 121
V +K G+ D V VG L+DM+ K CG +E A +VF+ ++ ++V TWN M+T +
Sbjct: 372 SEVHSIAVKMGFIDD-VLVGNSLVDMYSK-CGKLEDARKVFDSVKNKDVYTWNSMITGYC 429
Query: 122 QMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLC 181
Q GY + +LF RM + P+ T + ++ + G + G A+DL
Sbjct: 430 QAGYCGKAYELFTRMQDANLRPNIITWNTMISG-----YIKNGDE--------GEAMDL- 475
Query: 182 VGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDM 241
+ + DG + + N +W +IAGY++ +G++ EA+ LF M
Sbjct: 476 --------FQRMEKDGKV-----------QRNTATWNLIIAGYIQ-NGKKDEALELFRKM 515
Query: 242 LQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRL 301
PN T S+L ACANL ++H ++ L A++ V N+L + YA+SG +
Sbjct: 516 QFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDI 575
Query: 302 ECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETE-HTTGIGACSFTYACLLSGA 360
E +R F + K +++ +++ V + L + T GI T + ++
Sbjct: 576 EYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAH 635
Query: 361 ACIGTIGKGEQI-HALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMG-DRNVIT 418
+G + +G+++ +++ L +A++ +Y + E ALQ +M
Sbjct: 636 GLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPI 695
Query: 419 WTSIISGFAKHG 430
W S ++G HG
Sbjct: 696 WESFLTGCRIHG 707
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 327 bits (837), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 185/537 (34%), Positives = 303/537 (56%), Gaps = 14/537 (2%)
Query: 98 AHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDL--FFRMLLSGYTPDRFTLTSALTAC 155
A R+ ++Q ++ W+ ++ F+ + + M +G P R T L A
Sbjct: 55 ARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAV 114
Query: 156 AELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVV 215
+L S Q H+ +++ GL D V SL+ Y+ G + R+F+ + +VV
Sbjct: 115 FKLRD-SNPFQFHAHIVKFGLDSDPFVRNSLISGYSS---SGLFDFASRLFDGAEDKDVV 170
Query: 216 SWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQ 275
+WTA+I G+VR +G EAM F +M + VA N T SVLKA + D FG +H
Sbjct: 171 TWTAMIDGFVR-NGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGL 229
Query: 276 TIKLGLSAVNC---VANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNS 332
++ G V C + +SL++MY + + A+K FD + +++V+ ++ V+
Sbjct: 230 YLETG--RVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCF 287
Query: 333 DE-TLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNAL 391
D+ L E + + T + +LS A +G + +G ++H ++K+ E N + L
Sbjct: 288 DKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTL 347
Query: 392 ISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPND 451
I +Y KCG E A+ VF + ++NV TWT++I+GFA HGYA A +LFY ML + V PN+
Sbjct: 348 IDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNE 407
Query: 452 VTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFIN 511
VT++AVLSAC+H GL++EG + F SM+ + P+ +HYACMVD+ GR GLL EA I
Sbjct: 408 VTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIE 467
Query: 512 SMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYD 571
MP++ +VW +L GSC +H + ELG++AA +++ +P Y LL+NLY+ + W +
Sbjct: 468 RMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDE 527
Query: 572 VAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHP-QAQKIYDELDELASKIK 627
VA +RK MK ++++K G+SWIEV+ ++ +F D P ++ +Y LD + +++
Sbjct: 528 VARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQMR 584
Score = 163 bits (412), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 162/302 (53%), Gaps = 6/302 (1%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
+D+V+W +M+ F N EA+V F++M + G NE + L+A GR V
Sbjct: 167 KDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSV 226
Query: 65 FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG 124
G L+TG V +G L+DM+ K C + A +VF++M RNVVTW ++ + Q
Sbjct: 227 HGLYLETGRVKCDVFIGSSLVDMYGK-CSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSR 285
Query: 125 YPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGC 184
+ + +F ML S P+ TL+S L+ACA + L G+++H ++I++ + ++ G
Sbjct: 286 CFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGT 345
Query: 185 SLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQG 244
+L+D+Y KC G L ++ VF + E NV +WTA+I G+ G ++A LF ML
Sbjct: 346 TLIDLYVKC---GCLEEAILVFERLHEKNVYTWTAMINGFA-AHGYARDAFDLFYTMLSS 401
Query: 245 NVAPNGFTFSSVLKACANLPDFGFGEQLH-SQTIKLGLSAVNCVANSLINMYARSGRLEC 303
+V+PN TF +VL ACA+ G +L S + + +++++ R G LE
Sbjct: 402 HVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEE 461
Query: 304 AR 305
A+
Sbjct: 462 AK 463
Score = 149 bits (375), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/413 (27%), Positives = 201/413 (48%), Gaps = 24/413 (5%)
Query: 10 WCSMMSCFANNSMEHEAL--VTFLDMLEHGFYPNEYCFTAALRAC-----SNSLYFSVGR 62
W S++ F+ + L + + M +G P+ + F L+A SN F
Sbjct: 70 WDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPFQFHAHI 129
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
V FG DS V LI + G + A R+F+ ++++VVTW M+ F +
Sbjct: 130 VKFG-------LDSDPFVRNSLISGY-SSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVR 181
Query: 123 MGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSG-LALDLC 181
G +++ F M +G + T+ S L A ++E + G+ +H + +G + D+
Sbjct: 182 NGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVF 241
Query: 182 VGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDM 241
+G SLVDMY KC+ D+++VF+ MP NVV+WTALIAGYV+ ++ M +F +M
Sbjct: 242 IGSSLVDMYGKCSCYD---DAQKVFDEMPSRNVVTWTALIAGYVQSRCFDK-GMLVFEEM 297
Query: 242 LQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRL 301
L+ +VAPN T SSVL ACA++ G ++H IK + +LI++Y + G L
Sbjct: 298 LKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCL 357
Query: 302 ECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGA 360
E A F+ L EK++ + +++ + + + T ++ + T+ +LS
Sbjct: 358 EEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSAC 417
Query: 361 ACIGTIGKGEQIHALVVKSGFETNLSINN--ALISMYSKCGNKEAALQVFNDM 411
A G + +G ++ L +K F ++ ++ ++ + G E A + M
Sbjct: 418 AHGGLVEEGRRLF-LSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERM 469
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 116/220 (52%), Gaps = 7/220 (3%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
R++V+W ++++ + + + ++ F +ML+ PNE ++ L AC++ GR V
Sbjct: 269 RNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRV 328
Query: 65 FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG 124
++K + + + G LID++VK CG +E A VFE++ E+NV TW M+ FA G
Sbjct: 329 HCYMIKNS-IEINTTAGTTLIDLYVK-CGCLEEAILVFERLHEKNVYTWTAMINGFAAHG 386
Query: 125 YPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLH-SWVIRSGLALDLCVG 183
Y D+ DLF+ ML S +P+ T + L+ACA L+ G++L S R +
Sbjct: 387 YARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHY 446
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSMP-EHNVVSWTALIA 222
+VD++ + G L +++ + MP E V W AL
Sbjct: 447 ACMVDLFGR---KGLLEEAKALIERMPMEPTNVVWGALFG 483
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 324 bits (831), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 186/602 (30%), Positives = 324/602 (53%), Gaps = 68/602 (11%)
Query: 93 GDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSAL 152
G I SA +VF+ M E + V WN M+T ++++G +++I LF ++ S PD ++ T+ L
Sbjct: 18 GRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAIL 77
Query: 153 TACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSL--------VDSRR 204
+ CA L + G+++ S VIRSG L V SL+DMY KC+ S DSR
Sbjct: 78 STCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRN 137
Query: 205 ----------------------VFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDML 242
VF MP+ +W +I+G+ G+ + + LF +ML
Sbjct: 138 EVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAH-CGKLESCLSLFKEML 196
Query: 243 QGNVAPNGFTFSSVLKAC-ANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYAR---- 297
+ P+ +TFSS++ AC A+ + +G +H+ +K G S+ NS+++ Y +
Sbjct: 197 ESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSR 256
Query: 298 ---------------------------SGRLECARKCFDLLFEKSLVSCETIVDVIVRDL 330
G E A + F L EK++V+ T++ R+
Sbjct: 257 DDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNG 316
Query: 331 NSDETLNHETEH-TTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINN 389
+ ++ L E +G+ + F Y +L + + +G G+ IH ++ GF+ + N
Sbjct: 317 DGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGN 376
Query: 390 ALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKP 449
AL+++Y+KCG+ + A + F D+ ++++++W +++ F HG A +AL+L+ M+ +G+KP
Sbjct: 377 ALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKP 436
Query: 450 NDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEF 509
++VT+I +L+ CSH GL++EG F SM + + V+H CM+D+ GR G L+EA +
Sbjct: 437 DNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDL 496
Query: 510 I---NSMPLD-ADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYAT 565
+S+ D ++ W +LLG+C H +TELG +K++ EP + +++LLSNLY +
Sbjct: 497 ATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCS 556
Query: 566 EERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELDELASK 625
RW + +R+ M ++ + K G SWIEV NQV F VGD+SHP+ +++ + L+ L +
Sbjct: 557 TGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEELSETLNCLQHE 616
Query: 626 IK 627
++
Sbjct: 617 MR 618
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 121/460 (26%), Positives = 212/460 (46%), Gaps = 69/460 (15%)
Query: 6 DLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVF 65
D V+W +M++ ++ + EA+ F + P++Y FTA L C++ GR +
Sbjct: 34 DTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCASLGNVKFGRKIQ 93
Query: 66 GSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKM--QERNVVT----------- 112
V+++G F + + V LIDM+ K C D SA++VF M RN VT
Sbjct: 94 SLVIRSG-FCASLPVNNSLIDMYGK-CSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNA 151
Query: 113 --------------------WNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSAL 152
WN+M++ A G E + LF ML S + PD +T +S +
Sbjct: 152 EQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLM 211
Query: 153 TAC-AELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAK------------------- 192
AC A+ + G+ +H+ ++++G + + S++ Y K
Sbjct: 212 NACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQ 271
Query: 193 ---------CAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQ 243
C G + VF+ PE N+V+WT +I GY R +G ++A+R F +M++
Sbjct: 272 VSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGR-NGDGEQALRFFVEMMK 330
Query: 244 GNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLEC 303
V + F + +VL AC+ L G G+ +H I G V N+L+N+YA+ G ++
Sbjct: 331 SGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKE 390
Query: 304 ARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGAAC 362
A + F + K LVS T++ +D+ L ++ +GI + T+ LL+ +
Sbjct: 391 ADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSH 450
Query: 363 IGTIGKGEQIHALVVKSGFETNLSINNA--LISMYSKCGN 400
G + +G I +VK + L +++ +I M+ + G+
Sbjct: 451 SGLVEEGCMIFESMVKD-YRIPLEVDHVTCMIDMFGRGGH 489
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 113/444 (25%), Positives = 200/444 (45%), Gaps = 76/444 (17%)
Query: 186 LVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGN 245
L A A G + +R+VF+ MPE + V+W ++ Y R G QEA+ LF + +
Sbjct: 7 LTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSR-LGLHQEAIALFTQLRFSD 65
Query: 246 VAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECAR 305
P+ ++F+++L CA+L + FG ++ S I+ G A V NSLI+MY + A
Sbjct: 66 AKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSAN 125
Query: 306 KCF--------------DLLF-----EKSLVSCETIVDVIVRDLNSDETLNHETEHTTGI 346
K F LLF E+ + + V++ R + + H +
Sbjct: 126 KVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKL 185
Query: 347 GAC---------------SFTYACLLSG-AACIGTIGKGEQIHALVVKSGFETNLSINNA 390
+C +T++ L++ +A + G +HA+++K+G+ + + N+
Sbjct: 186 ESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNS 245
Query: 391 LISMYSKCGNK-------------------------------EAALQVFNDMGDRNVITW 419
++S Y+K G++ E AL+VF+ ++N++TW
Sbjct: 246 VLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTW 305
Query: 420 TSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRH 479
T++I+G+ ++G +AL F EM+++GV + Y AVL ACS + L+ G + H
Sbjct: 306 TTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIH 365
Query: 480 CHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGE 539
C G +V++ + G + EA + + D + W ++L + VHG L +
Sbjct: 366 C-GFQGYAYVGNALVNLYAKCGDIKEADRAFGDIA-NKDLVSWNTMLFAFGVHG---LAD 420
Query: 540 HAAK----MILEREPHDPATYILL 559
A K MI D T+I L
Sbjct: 421 QALKLYDNMIASGIKPDNVTFIGL 444
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 154/338 (45%), Gaps = 45/338 (13%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACS-NSLYFSVGR 62
KR +W M+S A+ L F +MLE F P+ Y F++ + ACS +S GR
Sbjct: 166 KRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGR 225
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVK---------------------------GC--- 92
+V +LK G+ S V ++ + K C
Sbjct: 226 MVHAVMLKNGW-SSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKI 284
Query: 93 GDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSAL 152
G+ E A VF E+N+VTW M+T + + G E ++ F M+ SG D F + L
Sbjct: 285 GETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVL 344
Query: 153 TACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH 212
AC+ L LL GK +H +I G VG +LV++YAKC G + ++ R F +
Sbjct: 345 HACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKC---GDIKEADRAFGDIANK 401
Query: 213 NVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACAN--LPDFG--- 267
++VSW ++ + G +A++L+ +M+ + P+ TF +L C++ L + G
Sbjct: 402 DLVSWNTMLFAFGV-HGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMI 460
Query: 268 FGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECAR 305
F + I L + V C +I+M+ R G L A+
Sbjct: 461 FESMVKDYRIPLEVDHVTC----MIDMFGRGGHLAEAK 494
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 113/226 (50%), Gaps = 5/226 (2%)
Query: 1 MGSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSV 60
+ ++++V+W +M++ + N +AL F++M++ G + + + A L ACS
Sbjct: 296 LAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGH 355
Query: 61 GRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRF 120
G+++ G ++ G F + VG L++++ K CGDI+ A R F + +++V+WN M+ F
Sbjct: 356 GKMIHGCLIHCG-FQGYAYVGNALVNLYAK-CGDIKEADRAFGDIANKDLVSWNTMLFAF 413
Query: 121 AQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRS-GLALD 179
G + ++ L+ M+ SG PD T LT C+ L+ G + +++ + L+
Sbjct: 414 GVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLE 473
Query: 180 LCVGCSLVDMYAKCAVDGSLVDSRRVFNSM--PEHNVVSWTALIAG 223
+ ++DM+ + D ++S+ N SW L+
Sbjct: 474 VDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGA 519
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 322 bits (826), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 179/511 (35%), Positives = 279/511 (54%), Gaps = 14/511 (2%)
Query: 94 DIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALT 153
++ A VFE + +V WN M+ ++ P+ ++ + ML GY+PD FT L
Sbjct: 56 NLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLK 115
Query: 154 ACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHN 213
AC+ L + G +H +V+++G +++ V L+ MY C G + RVF +P+ N
Sbjct: 116 ACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCC---GEVNYGLRVFEDIPQWN 172
Query: 214 VVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLH 273
VV+W +LI+G+V + + +A+ F +M V N +L AC D G+ H
Sbjct: 173 VVAWGSLISGFVNNN-RFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFH 231
Query: 274 SQTIKLGLS-------AVNCV-ANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDV 325
LG N + A SLI+MYA+ G L AR FD + E++LVS +I+
Sbjct: 232 GFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITG 291
Query: 326 IVRDLNSDETLNHETEHTT-GIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETN 384
++ +++E L + GI T+ ++ + G G+ IHA V K+GF +
Sbjct: 292 YSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKD 351
Query: 385 LSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLE 444
+I AL++MY+K G+ E+A + F D+ ++ I WT +I G A HG+ +AL +F M E
Sbjct: 352 AAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQE 411
Query: 445 TG-VKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLL 503
G P+ +TY+ VL ACSH+GL++EG ++F MR HG+ P VEHY CMVD+L R+G
Sbjct: 412 KGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRF 471
Query: 504 SEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLY 563
EA + +MP+ + +W +LL C +H N EL + M+ E E Y+LLSN+Y
Sbjct: 472 EEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIY 531
Query: 564 ATEERWYDVAAIRKTMKQKKIIKEAGYSWIE 594
A RW DV IR++MK K++ K G+S +E
Sbjct: 532 AKAGRWADVKLIRESMKSKRVDKVLGHSSVE 562
Score = 182 bits (463), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 124/435 (28%), Positives = 219/435 (50%), Gaps = 24/435 (5%)
Query: 10 WCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVL 69
W SM+ ++N+ +AL+ + +ML G+ P+ + F L+ACS G V G V+
Sbjct: 75 WNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVV 134
Query: 70 KTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDS 129
KTG F+ ++ V L+ M++ CG++ RVFE + + NVV W +++ F D+
Sbjct: 135 KTG-FEVNMYVSTCLLHMYM-CCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDA 192
Query: 130 IDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWV--------IRSGLALDLC 181
I+ F M +G + + L AC + + GK H ++ +S + ++
Sbjct: 193 IEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVI 252
Query: 182 VGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDM 241
+ SL+DMYAKC G L +R +F+ MPE +VSW ++I GY + +G +EA+ +F DM
Sbjct: 253 LATSLIDMYAKC---GDLRTARYLFDGMPERTLVSWNSIITGYSQ-NGDAEEALCMFLDM 308
Query: 242 LQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRL 301
L +AP+ TF SV++A G+ +H+ K G + +L+NMYA++G
Sbjct: 309 LDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDA 368
Query: 302 ECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN-----HETEHTTGIGACSFTYACL 356
E A+K F+ L +K ++ ++ + + +E L+ E + T G TY +
Sbjct: 369 ESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDG---ITYLGV 425
Query: 357 LSGAACIGTIGKGEQIHALVVK-SGFETNLSINNALISMYSKCGNKEAALQVFNDMGDR- 414
L + IG + +G++ A + G E + ++ + S+ G E A ++ M +
Sbjct: 426 LYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKP 485
Query: 415 NVITWTSIISGFAKH 429
NV W ++++G H
Sbjct: 486 NVNIWGALLNGCDIH 500
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 162/310 (52%), Gaps = 14/310 (4%)
Query: 6 DLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVF 65
++V+W S++S F NN+ +A+ F +M +G NE L AC G+
Sbjct: 172 NVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFH 231
Query: 66 GSVLKTG---YFDSHVS----VGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMT 118
G + G YF S V + LIDM+ K CGD+ +A +F+ M ER +V+WN ++T
Sbjct: 232 GFLQGLGFDPYFQSKVGFNVILATSLIDMYAK-CGDLRTARYLFDGMPERTLVSWNSIIT 290
Query: 119 RFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLAL 178
++Q G E+++ +F ML G PD+ T S + A +G+ +H++V ++G
Sbjct: 291 GYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVK 350
Query: 179 DLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLF 238
D + C+LV+MYAK G +++ F + + + ++WT +I G + G EA+ +F
Sbjct: 351 DAAIVCALVNMYAKT---GDAESAKKAFEDLEKKDTIAWTVVIIG-LASHGHGNEALSIF 406
Query: 239 CDMLQ-GNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKL-GLSAVNCVANSLINMYA 296
M + GN P+G T+ VL AC+++ G++ ++ L GL ++++ +
Sbjct: 407 QRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILS 466
Query: 297 RSGRLECARK 306
R+GR E A +
Sbjct: 467 RAGRFEEAER 476
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 113/443 (25%), Positives = 202/443 (45%), Gaps = 29/443 (6%)
Query: 136 MLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAV 195
M+ Y P + S L C L L+ QLH +I+S + ++ L+D C
Sbjct: 1 MMKKHYKP----ILSQLENCRSLVELN---QLHGLMIKSSVIRNVIPLSRLIDFCTTCPE 53
Query: 196 DGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSS 255
+L +R VF S+ +V W ++I GY S +A+ + +ML+ +P+ FTF
Sbjct: 54 TMNLSYARSVFESIDCPSVYIWNSMIRGY-SNSPNPDKALIFYQEMLRKGYSPDYFTFPY 112
Query: 256 VLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKS 315
VLKAC+ L D FG +H +K G V+ L++MY G + + F+ + + +
Sbjct: 113 VLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWN 172
Query: 316 LVSCETIVDVIVRDLN-SDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHA 374
+V+ +++ V + SD + G+ A LL I G+ H
Sbjct: 173 VVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHG 232
Query: 375 LVVKSGFET--------NLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGF 426
+ GF+ N+ + +LI MY+KCG+ A +F+ M +R +++W SII+G+
Sbjct: 233 FLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGY 292
Query: 427 AKHGYATKALELFYEMLETGVKPNDVTYIAVLSA-----CSHVGLIDEGWKHFNSMRHCH 481
+++G A +AL +F +ML+ G+ P+ VT+++V+ A CS +G + ++
Sbjct: 293 SQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLG------QSIHAYVSKT 346
Query: 482 GVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHA 541
G V +V++ ++G A + + D + W ++ HG+
Sbjct: 347 GFVKDAAIVCALVNMYAKTGDAESAKKAFEDLE-KKDTIAWTVVIIGLASHGHGNEALSI 405
Query: 542 AKMILEREPHDPATYILLSNLYA 564
+ + E+ P L LYA
Sbjct: 406 FQRMQEKGNATPDGITYLGVLYA 428
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 122/225 (54%), Gaps = 12/225 (5%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
+R LVSW S+++ ++ N EAL FLDML+ G P++ F + +RA +G+
Sbjct: 279 ERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQS 338
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
+ V KTG F ++ C L++M+ K GD ESA + FE +++++ + W +++ A
Sbjct: 339 IHAYVSKTG-FVKDAAIVCALVNMYAK-TGDAESAKKAFEDLEKKDTIAWTVVIIGLASH 396
Query: 124 GYPEDSIDLFFRMLLSG-YTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCV 182
G+ +++ +F RM G TPD T L AC+ + L+ G++ + +R L+ V
Sbjct: 397 GHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFA-EMRDLHGLEPTV 455
Query: 183 ---GCSLVDMYAKCAVDGSLVDSRRVFNSMP-EHNVVSWTALIAG 223
GC +VD+ ++ G ++ R+ +MP + NV W AL+ G
Sbjct: 456 EHYGC-MVDILSRA---GRFEEAERLVKTMPVKPNVNIWGALLNG 496
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 321 bits (822), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 184/538 (34%), Positives = 306/538 (56%), Gaps = 21/538 (3%)
Query: 92 CGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSA 151
C A RVF ++QE NV N ++ AQ P + +F M G D FT
Sbjct: 64 CRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFL 123
Query: 152 LTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPE 211
L AC+ L V K +H+ + + GL+ D+ V +L+D Y++C G + D+ ++F M E
Sbjct: 124 LKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLG-VRDAMKLFEKMSE 182
Query: 212 HNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQ 271
+ VSW +++ G V+ +G+ ++A RLF +M Q ++ +++++L A + +
Sbjct: 183 RDTVSWNSMLGGLVK-AGELRDARRLFDEMPQRDL----ISWNTMLDGYARCREMSKAFE 237
Query: 272 LHSQTIKLGLSAVNCVANSLINM-YARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDL 330
L + + N V+ S + M Y+++G +E AR FD + L + + I+
Sbjct: 238 LFEK-----MPERNTVSWSTMVMGYSKAGDMEMARVMFDKM---PLPAKNVVTWTIIIAG 289
Query: 331 NSDETLNHETEHTTGIGACS---FTYACLLS-GAACI--GTIGKGEQIHALVVKSGFETN 384
+++ L E + S F A ++S AAC G + G +IH+++ +S +N
Sbjct: 290 YAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSN 349
Query: 385 LSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLE 444
+ NAL+ MY+KCGN + A VFND+ +++++W +++ G HG+ +A+ELF M
Sbjct: 350 AYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRR 409
Query: 445 TGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLS 504
G++P+ VT+IAVL +C+H GLIDEG +F SM + +VP+VEHY C+VD+LGR G L
Sbjct: 410 EGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLK 469
Query: 505 EAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYA 564
EAI+ + +MP++ + ++W +LLG+CR+H ++ + +++ +P DP Y LLSN+YA
Sbjct: 470 EAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYA 529
Query: 565 TEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELDEL 622
E W VA IR MK + K +G S +E+E+ +H+F V D SHP++ +IY L L
Sbjct: 530 AAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSL 587
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 199/413 (48%), Gaps = 25/413 (6%)
Query: 152 LTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPE 211
L CA L + KQLH+ +IR L DL + L+ + C V RVFN + E
Sbjct: 26 LPKCANLNQV---KQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAV---RVFNQVQE 79
Query: 212 HNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQ 271
NV +LI + + S Q +A +F +M + + + FT+ +LKAC+ +
Sbjct: 80 PNVHLCNSLIRAHAQNS-QPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKM 138
Query: 272 LHSQTIKLGLSAVNCVANSLINMYARSGRLEC--ARKCFDLLFEKSLVSCETIVDVIVR- 328
+H+ KLGLS+ V N+LI+ Y+R G L A K F+ + E+ VS +++ +V+
Sbjct: 139 MHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKA 198
Query: 329 -DLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSI 387
+L L E I ++ +L G A + K ++ + E N
Sbjct: 199 GELRDARRLFDEMPQRDLI-----SWNTMLDGYARCREMSKAFELFEKMP----ERNTVS 249
Query: 388 NNALISMYSKCGNKEAALQVFNDM--GDRNVITWTSIISGFAKHGYATKALELFYEMLET 445
+ ++ YSK G+ E A +F+ M +NV+TWT II+G+A+ G +A L +M+ +
Sbjct: 250 WSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVAS 309
Query: 446 GVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSE 505
G+K + I++L+AC+ GL+ G + +S+ + ++D+ + G L +
Sbjct: 310 GLKFDAAAVISILAACTESGLLSLGMR-IHSILKRSNLGSNAYVLNALLDMYAKCGNLKK 368
Query: 506 AIEFINSMPLDADAMVWRSLLGSCRVHGN-TELGEHAAKMILEREPHDPATYI 557
A + N +P D + W ++L VHG+ E E ++M E D T+I
Sbjct: 369 AFDVFNDIP-KKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFI 420
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 110/225 (48%), Gaps = 15/225 (6%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
+++V+W +++ +A + EA M+ G + + L AC+ S S+G +
Sbjct: 278 KNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRI 337
Query: 65 FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG 124
S+LK S+ V L+DM+ K CG+++ A VF + ++++V+WN M+ G
Sbjct: 338 H-SILKRSNLGSNAYVLNALLDMYAK-CGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHG 395
Query: 125 YPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLC--- 181
+ +++I+LF RM G PD+ T + L +C L+ G + DL
Sbjct: 396 HGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGI---DYFYSMEKVYDLVPQV 452
Query: 182 --VGCSLVDMYAKCAVDGSLVDSRRVFNSMP-EHNVVSWTALIAG 223
GC LVD+ + G L ++ +V +MP E NVV W AL+
Sbjct: 453 EHYGC-LVDLLGRV---GRLKEAIKVVQTMPMEPNVVIWGALLGA 493
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 320 bits (821), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 182/510 (35%), Positives = 287/510 (56%), Gaps = 43/510 (8%)
Query: 145 RFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRR 204
R TL S L +C + + +H+ +IR+ D V L+ + C+ S+ +
Sbjct: 29 RKTLISVLRSCKNIAHVP---SIHAKIIRTFHDQDAFVVFELIRV---CSTLDSVDYAYD 82
Query: 205 VFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLP 264
VF+ + NV +TA+I G+V SG+ + + L+ M+ +V P+ + +SVLKAC
Sbjct: 83 VFSYVSNPNVYLYTAMIDGFV-SSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC---- 137
Query: 265 DFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKS------LVS 318
D ++H+Q +KLG + V ++ +Y +SG L A+K FD + ++ +++
Sbjct: 138 DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMIN 197
Query: 319 C-----------ETIVDVIVRD----------LNSDETLNHETE-----HTTGIGACSFT 352
C E DV ++D L ++ +N E + A FT
Sbjct: 198 CYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFT 257
Query: 353 YACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMG 412
C+LS + +G + G +H+ V E + + NALI+MYS+CG+ A +VF M
Sbjct: 258 AVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMR 317
Query: 413 DRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWK 472
D++VI++ ++ISG A HG + +A+ F +M+ G +PN VT +A+L+ACSH GL+D G +
Sbjct: 318 DKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLE 377
Query: 473 HFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVH 532
FNSM+ V P++EHY C+VD+LGR G L EA FI ++P++ D ++ +LL +C++H
Sbjct: 378 VFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIH 437
Query: 533 GNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSW 592
GN ELGE AK + E E D TY+LLSNLYA+ +W + IR++M+ I KE G S
Sbjct: 438 GNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCST 497
Query: 593 IEVENQVHKFHVGDTSHPQAQKIYDELDEL 622
IEV+NQ+H+F VGD +HP + IY L EL
Sbjct: 498 IEVDNQIHEFLVGDIAHPHKEAIYQRLQEL 527
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 126/509 (24%), Positives = 210/509 (41%), Gaps = 96/509 (18%)
Query: 45 FTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIES---AHRV 101
+ LR+C N + + +++T + D V ELI + C ++S A+ V
Sbjct: 32 LISVLRSCKNIAHVPS---IHAKIIRT-FHDQDAFVVFELI----RVCSTLDSVDYAYDV 83
Query: 102 FEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELL 161
F + NV + M+ F G D + L+ RM+ + PD + +TS L AC L
Sbjct: 84 FSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACD----L 139
Query: 162 SVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH--------- 212
V +++H+ V++ G VG ++++Y K G LV+++++F+ MP+
Sbjct: 140 KVCREIHAQVLKLGFGSSRSVGLKMMEIYGK---SGELVNAKKMFDEMPDRDHVAATVMI 196
Query: 213 ----------------------NVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNG 250
+ V WTA+I G VR + +A+ LF +M NV+ N
Sbjct: 197 NCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNK-EMNKALELFREMQMENVSANE 255
Query: 251 FTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDL 310
FT VL AC++L G +HS + N V N+LINMY+R G + AR+ F +
Sbjct: 256 FTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRV 315
Query: 311 LFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGE 370
+ +K ++S Y ++SG A G +
Sbjct: 316 MRDKDVIS----------------------------------YNTMISGLAMHGASVEAI 341
Query: 371 QIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMG-----DRNVITWTSIISG 425
+V GF N AL++ S G + L+VFN M + + + I+
Sbjct: 342 NEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDL 401
Query: 426 FAKHGYATKALELFYEMLET-GVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVV 484
+ G LE Y +E ++P+ + +LSAC G ++ G K +
Sbjct: 402 LGRVG----RLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESEN-- 455
Query: 485 PRVEHYACMVDVLGRSGLLSEAIEFINSM 513
P Y + ++ SG E+ E SM
Sbjct: 456 PDSGTYVLLSNLYASSGKWKESTEIRESM 484
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 164/333 (49%), Gaps = 50/333 (15%)
Query: 10 WCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVL 69
+ +M+ F ++ + + + M+ + P+ Y T+ L+AC V R + VL
Sbjct: 95 YTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACD----LKVCREIHAQVL 150
Query: 70 KTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDS 129
K G F S SVG ++++++ K G++ +A ++F++M +R+ V +M+ +++ G+ +++
Sbjct: 151 KLG-FGSSRSVGLKMMEIYGKS-GELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEA 208
Query: 130 IDLF------------------------------FR-MLLSGYTPDRFTLTSALTACAEL 158
++LF FR M + + + FT L+AC++L
Sbjct: 209 LELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDL 268
Query: 159 ELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWT 218
L +G+ +HS+V + L VG +L++MY++C G + ++RRVF M + +V+S+
Sbjct: 269 GALELGRWVHSFVENQRMELSNFVGNALINMYSRC---GDINEARRVFRVMRDKDVISYN 325
Query: 219 ALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACAN--LPDFG---FGEQLH 273
+I+G G EA+ F DM+ PN T ++L AC++ L D G F
Sbjct: 326 TMISGLAM-HGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKR 384
Query: 274 SQTIKLGLSAVNCVANSLINMYARSGRLECARK 306
++ + C+ +++ R GRLE A +
Sbjct: 385 VFNVEPQIEHYGCI----VDLLGRVGRLEEAYR 413
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 132/301 (43%), Gaps = 50/301 (16%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
+D V W +M+ N ++AL F +M NE+ L ACS+ +GR V
Sbjct: 218 KDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWV 277
Query: 65 FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG 124
S ++ + VG LI+M+ + CGDI A RVF M++++V+++N M++ A G
Sbjct: 278 H-SFVENQRMELSNFVGNALINMYSR-CGDINEARRVFRVMRDKDVISYNTMISGLAMHG 335
Query: 125 YPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGC 184
++I+ F M+ G+ P++ TL + L AC+ LL +G ++ + +
Sbjct: 336 ASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSM------------- 382
Query: 185 SLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQG 244
+RVFN P+ + I + G+ +EA R ++
Sbjct: 383 ------------------KRVFNVEPQ---IEHYGCIVDLLGRVGRLEEAYRFIENI--- 418
Query: 245 NVAPNGFTFSSVLKACANLPDFGFGEQL-----HSQTIKLGLSAVNCVANSLINMYARSG 299
+ P+ ++L AC + GE++ S+ G + L N+YA SG
Sbjct: 419 PIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVL------LSNLYASSG 472
Query: 300 R 300
+
Sbjct: 473 K 473
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 320 bits (820), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 182/563 (32%), Positives = 303/563 (53%), Gaps = 39/563 (6%)
Query: 100 RVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSG---YTPDRFTLTSALTACA 156
++ + ++ N+ +WN+ + F++ P++S L+ +ML G PD FT CA
Sbjct: 108 KILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCA 167
Query: 157 ELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVS 216
+L L S+G + V++ L L V + + M+A C G + ++R+VF+ P ++VS
Sbjct: 168 DLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASC---GDMENARKVFDESPVRDLVS 224
Query: 217 WTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQT 276
W LI GY + G+ ++A+ ++ M V P+ T ++ +C+ L D G++ +
Sbjct: 225 WNCLINGY-KKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYV 283
Query: 277 IKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIV------------- 323
+ GL + N+L++M+++ G + AR+ FD L ++++VS T++
Sbjct: 284 KENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSR 343
Query: 324 ---------DVIVRDL----------NSDETLNHETEHTTGIGACSFTYACLLSGAACIG 364
DV++ + D + T+ T LS + +G
Sbjct: 344 KLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLG 403
Query: 365 TIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIIS 424
+ G IH + K N+++ +L+ MY+KCGN AL VF+ + RN +T+T+II
Sbjct: 404 ALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIG 463
Query: 425 GFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVV 484
G A HG A+ A+ F EM++ G+ P+++T+I +LSAC H G+I G +F+ M+ +
Sbjct: 464 GLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLN 523
Query: 485 PRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKM 544
P+++HY+ MVD+LGR+GLL EA + SMP++ADA VW +LL CR+HGN ELGE AAK
Sbjct: 524 PQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKK 583
Query: 545 ILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHV 604
+LE +P D Y+LL +Y W D R+ M ++ + K G S IEV V +F V
Sbjct: 584 LLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIV 643
Query: 605 GDTSHPQAQKIYDELDELASKIK 627
D S P+++KIYD L L ++
Sbjct: 644 RDKSRPESEKIYDRLHCLGRHMR 666
Score = 156 bits (394), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 121/484 (25%), Positives = 226/484 (46%), Gaps = 47/484 (9%)
Query: 6 DLVSWCSMMSCFANNSMEHEALVTFLDMLEHG---FYPNEYCFTAALRACSNSLYFSVGR 62
++ SW + F+ + E+ + + ML HG P+ + + + C++ S+G
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH 176
Query: 63 VVFGSVLKTGY-FDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFA 121
++ G VLK SHV I MF CGD+E+A +VF++ R++V+WN ++ +
Sbjct: 177 MILGHVLKLRLELVSHVHNAS--IHMFA-SCGDMENARKVFDESPVRDLVSWNCLINGYK 233
Query: 122 QMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLC 181
++G E +I ++ M G PD T+ +++C+ L L+ GK+ + +V +GL + +
Sbjct: 234 KIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIP 293
Query: 182 VGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVR--------------- 226
+ +L+DM++KC G + ++RR+F+++ + +VSWT +I+GY R
Sbjct: 294 LVNALMDMFSKC---GDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDME 350
Query: 227 ------------GSGQE---QEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQ 271
GS Q Q+A+ LF +M N P+ T L AC+ L G
Sbjct: 351 EKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIW 410
Query: 272 LHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLN 331
+H K LS + SL++MYA+ G + A F + ++ ++ I+ + +
Sbjct: 411 IHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGD 470
Query: 332 SDETLNHETEHT-TGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSIN-- 388
+ +++ E GI T+ LLS G I G + +KS F N +
Sbjct: 471 ASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFS-QMKSRFNLNPQLKHY 529
Query: 389 NALISMYSKCGNKEAALQVFNDMG-DRNVITWTSIISGFAKHGYATKALELFYEMLETGV 447
+ ++ + + G E A ++ M + + W +++ G HG + ++LE +
Sbjct: 530 SIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLE--L 587
Query: 448 KPND 451
P+D
Sbjct: 588 DPSD 591
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 160/337 (47%), Gaps = 38/337 (11%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
RDLVSW +++ + +A+ + M G P++ + +CS + G+
Sbjct: 220 RDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEF 279
Query: 65 FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG 124
+ V + G + + L+DMF K CGDI A R+F+ +++R +V+W M++ +A+ G
Sbjct: 280 YEYVKENG-LRMTIPLVNALMDMFSK-CGDIHEARRIFDNLEKRTIVSWTTMISGYARCG 337
Query: 125 Y-------------------------------PEDSIDLFFRMLLSGYTPDRFTLTSALT 153
+D++ LF M S PD T+ L+
Sbjct: 338 LLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLS 397
Query: 154 ACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHN 213
AC++L L VG +H ++ + L+L++ +G SLVDMYAKC G++ ++ VF+ + N
Sbjct: 398 ACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKC---GNISEALSVFHGIQTRN 454
Query: 214 VVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLH 273
+++TA+I G G A+ F +M+ +AP+ TF +L AC + G
Sbjct: 455 SLTYTAIIGGLAL-HGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYF 513
Query: 274 SQ-TIKLGLSAVNCVANSLINMYARSGRLECARKCFD 309
SQ + L+ + ++++ R+G LE A + +
Sbjct: 514 SQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLME 550
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 100/222 (45%), Gaps = 7/222 (3%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
++D+V W +M+ +AL F +M P+E L ACS VG
Sbjct: 351 EKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIW 410
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
+ + K +V++G L+DM+ K CG+I A VF +Q RN +T+ ++ A
Sbjct: 411 IHRYIEKYS-LSLNVALGTSLVDMYAK-CGNISEALSVFHGIQTRNSLTYTAIIGGLALH 468
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWV-IRSGLALDLCV 182
G +I F M+ +G PD T L+AC ++ G+ S + R L L
Sbjct: 469 GDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKH 528
Query: 183 GCSLVDMYAKCAVDGSLVDSRRVFNSMP-EHNVVSWTALIAG 223
+VD+ + G L ++ R+ SMP E + W AL+ G
Sbjct: 529 YSIMVDLLGRA---GLLEEADRLMESMPMEADAAVWGALLFG 567
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 319 bits (818), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 193/626 (30%), Positives = 327/626 (52%), Gaps = 42/626 (6%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLE-HGFYPNEYCFTAALRACSNSLYFSVG 61
S+R++V+W +M+S + ++ ++A+ + ML+ NE+ ++A L+AC +G
Sbjct: 67 SERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLG 126
Query: 62 RVVFGSVLKTGYFDSHVSVGCELIDMFVKG------------------------------ 91
+V+ + K V + ++DM+VK
Sbjct: 127 ILVYERIGKEN-LRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCK 185
Query: 92 CGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSA 151
G ++ A +F +M + NVV+WN +++ F G P +++ RM G D F L
Sbjct: 186 AGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPR-ALEFLVRMQREGLVLDGFALPCG 244
Query: 152 LTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMP- 210
L AC+ LL++GKQLH V++SGL +L+DMY+ C GSL+ + VF+
Sbjct: 245 LKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNC---GSLIYAADVFHQEKL 301
Query: 211 --EHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGF 268
+V W ++++G++ + + A+ L + Q ++ + +T S LK C N +
Sbjct: 302 AVNSSVAVWNSMLSGFLINE-ENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRL 360
Query: 269 GEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVR 328
G Q+HS + G V + L++++A G ++ A K F L K +++ ++ V+
Sbjct: 361 GLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVK 420
Query: 329 D-LNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSI 387
NS G+ A F + +L + + ++G G+QIH L +K G+E+
Sbjct: 421 SGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVT 480
Query: 388 NNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGV 447
AL+ MY KCG + + +F+ M +R+V++WT II GF ++G +A F++M+ G+
Sbjct: 481 ATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGI 540
Query: 448 KPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAI 507
+PN VT++ +LSAC H GL++E +M+ +G+ P +EHY C+VD+LG++GL EA
Sbjct: 541 EPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEAN 600
Query: 508 EFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEE 567
E IN MPL+ D +W SLL +C H N L A+ +L+ P DP+ Y LSN YAT
Sbjct: 601 ELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLG 660
Query: 568 RWYDVAAIRKTMKQKKIIKEAGYSWI 593
W ++ +R+ K K KE+G SWI
Sbjct: 661 MWDQLSKVREAAK-KLGAKESGMSWI 685
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 139/537 (25%), Positives = 245/537 (45%), Gaps = 63/537 (11%)
Query: 45 FTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEK 104
A LR C F G + V+K G +V + +I M+V + AH+VF++
Sbjct: 8 IAAGLRHCGKVQAFKRGESIQAHVIKQG-ISQNVFIANNVISMYVD-FRLLSDAHKVFDE 65
Query: 105 MQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLS-GYTPDRFTLTSALTACAELELLSV 163
M ERN+VTW M++ + G P +I+L+ RML S + F ++ L AC + + +
Sbjct: 66 MSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQL 125
Query: 164 GKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRR------------------- 204
G ++ + + L D+ + S+VDMY K +G L+++
Sbjct: 126 GILVYERIGKENLRGDVVLMNSVVDMYVK---NGRLIEANSSFKEILRPSSTSWNTLISG 182
Query: 205 ------------VFNSMPEHNVVSWTALIAGYV-RGSGQEQEAMRLFCDMLQGNVAPNGF 251
+F+ MP+ NVVSW LI+G+V +GS A+ M + + +GF
Sbjct: 183 YCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGS---PRALEFLVRMQREGLVLDGF 239
Query: 252 TFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLL 311
LKAC+ G+QLH +K GL + ++LI+MY+ G L A D+
Sbjct: 240 ALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAA---DVF 296
Query: 312 FEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGI-------GACSFTYACLLSGA--AC 362
++ L ++ + + S +N E E + C +Y LSGA C
Sbjct: 297 HQEKLAVNSSV--AVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYT--LSGALKIC 352
Query: 363 IGTIG--KGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWT 420
I + G Q+H+LVV SG+E + + + L+ +++ GN + A ++F+ + ++++I ++
Sbjct: 353 INYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFS 412
Query: 421 SIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGW-KHFNSMRH 479
+I G K G+ + A LF E+++ G+ + +L CS L GW K + +
Sbjct: 413 GLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCS--SLASLGWGKQIHGLCI 470
Query: 480 CHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTE 536
G +VD+ + G + + + M L+ D + W ++ +G E
Sbjct: 471 KKGYESEPVTATALVDMYVKCGEIDNGVVLFDGM-LERDVVSWTGIIVGFGQNGRVE 526
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 315 bits (807), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 185/603 (30%), Positives = 318/603 (52%), Gaps = 15/603 (2%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGF--YPNEYCFTAALRACSNSLYFSVG 61
+ L+S+ ++ + + H+A+ F+ M+ G P+ Y + +A +G
Sbjct: 77 QSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLG 136
Query: 62 RVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFA 121
VV G +L++ +F V L+ M++ G +E A VF+ M+ R+V++WN M++ +
Sbjct: 137 LVVHGRILRS-WFGRDKYVQNALLAMYMN-FGKVEMARDVFDVMKNRDVISWNTMISGYY 194
Query: 122 QMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLC 181
+ GY D++ +F M+ D T+ S L C L+ L +G+ +H V L +
Sbjct: 195 RNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIE 254
Query: 182 VGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDM 241
V +LV+MY KC G + ++R VF+ M +V++WT +I GY G + A+ L C +
Sbjct: 255 VKNALVNMYLKC---GRMDEARFVFDRMERRDVITWTCMINGYTE-DGDVENALEL-CRL 309
Query: 242 LQ-GNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGR 300
+Q V PN T +S++ C + G+ LH ++ + + + SLI+MYA+ R
Sbjct: 310 MQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKR 369
Query: 301 LECARKCFDLLFEKSLVSCETIVDVIVR-DLNSDETLNHETEHTTGIGACSFTYACLLSG 359
++ + F + I+ V+ +L SD + + T LL
Sbjct: 370 VDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPA 429
Query: 360 AACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDR----N 415
A + + + IH + K+GF ++L L+ +YSKCG E+A ++FN + ++ +
Sbjct: 430 YAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKD 489
Query: 416 VITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFN 475
V+ W ++ISG+ HG AL++F EM+ +GV PN++T+ + L+ACSH GL++EG F
Sbjct: 490 VVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFR 549
Query: 476 SMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNT 535
M + + R HY C+VD+LGR+G L EA I ++P + + VW +LL +C H N
Sbjct: 550 FMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENV 609
Query: 536 ELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEV 595
+LGE AA + E EP + Y+LL+N+YA RW D+ +R M+ + K+ G+S IE+
Sbjct: 610 QLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEI 669
Query: 596 ENQ 598
+
Sbjct: 670 RSN 672
Score = 168 bits (425), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/466 (25%), Positives = 226/466 (48%), Gaps = 22/466 (4%)
Query: 92 CGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGY--TPDRFTLT 149
CG I A ++FE+M + +++++N+++ + + G D+I +F RM+ G PD +T
Sbjct: 62 CGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYP 121
Query: 150 SALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSM 209
A EL+ + +G +H ++RS D V +L+ MY G + +R VF+ M
Sbjct: 122 FVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNF---GKVEMARDVFDVM 178
Query: 210 PEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFG 269
+V+SW +I+GY R +G +A+ +F M+ +V + T S+L C +L D G
Sbjct: 179 KNRDVISWNTMISGYYR-NGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMG 237
Query: 270 EQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRD 329
+H + L V N+L+NMY + GR++ AR FD + + +++ +++ D
Sbjct: 238 RNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTED 297
Query: 330 LNSDETLNH-ETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSIN 388
+ + L G+ + T A L+S + G+ +H V+ +++ I
Sbjct: 298 GDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIE 357
Query: 389 NALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVK 448
+LISMY+KC + +VF+ + W++II+G ++ + AL LF M V+
Sbjct: 358 TSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVE 417
Query: 449 PNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCH----GVVPRVEHYACMVDVLGRSGLLS 504
PN T ++L A + + + + HC+ G + ++ +V V + G L
Sbjct: 418 PNIATLNSLLPAYAALADLRQAMN-----IHCYLTKTGFMSSLDAATGLVHVYSKCGTLE 472
Query: 505 EAIEFINSMP---LDADAMVWRSLLGSCRVHGNTELGEHAAKMILE 547
A + N + D ++W +L+ +HG+ G +A ++ +E
Sbjct: 473 SAHKIFNGIQEKHKSKDVVLWGALISGYGMHGD---GHNALQVFME 515
Score = 135 bits (341), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 173/358 (48%), Gaps = 18/358 (5%)
Query: 150 SALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSM 209
S L A + +S K LH VI G + + +L YA C G + +R++F M
Sbjct: 20 SLLNHFAATQSISKTKALHCHVITGG-RVSGHILSTLSVTYALC---GHITYARKLFEEM 75
Query: 210 PEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNV--APNGFTFSSVLKACANLPDFG 267
P+ +++S+ +I YVR G +A+ +F M+ V P+G+T+ V KA L
Sbjct: 76 PQSSLLSYNIVIRMYVR-EGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMK 134
Query: 268 FGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIV 327
G +H + ++ V N+L+ MY G++E AR FD++ + ++S T++
Sbjct: 135 LGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYY 194
Query: 328 RD-LNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLS 386
R+ +D + + + T +L + + G +H LV + +
Sbjct: 195 RNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIE 254
Query: 387 INNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETG 446
+ NAL++MY KCG + A VF+ M R+VITWT +I+G+ + G ALEL M G
Sbjct: 255 VKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEG 314
Query: 447 VKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLS 504
V+PN VT +++S C +++G + HG R + Y+ D++ + L+S
Sbjct: 315 VRPNAVTIASLVSVCGDALKVNDG-------KCLHGWAVRQQVYS---DIIIETSLIS 362
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 313 bits (802), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 189/596 (31%), Positives = 318/596 (53%), Gaps = 13/596 (2%)
Query: 47 AALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQ 106
A L+ C+ + G+ + G +++ G+ D G L++M+ K CG + A VF
Sbjct: 65 ATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAK-CGLMRRAVLVFGG-S 122
Query: 107 ERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQ 166
ER+V +N +++ F G P D+++ + M +G PD++T S L +EL V K+
Sbjct: 123 ERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDV-KK 181
Query: 167 LHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHN-VVSWTALIAGYV 225
+H + G D VG LV Y+K S+ D+++VF+ +P+ + V W AL+ GY
Sbjct: 182 VHGLAFKLGFDSDCYVGSGLVTSYSKFM---SVEDAQKVFDELPDRDDSVLWNALVNGYS 238
Query: 226 RGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVN 285
+ + ++A+ +F M + V + T +SVL A D G +H +K G +
Sbjct: 239 Q-IFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDI 297
Query: 286 CVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN-HETEHTT 344
V+N+LI+MY +S LE A F+ + E+ L + +++ V + D TL E +
Sbjct: 298 VVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCS 357
Query: 345 GIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGF----ETNLSINNALISMYSKCGN 400
GI T +L + ++ +G +IH ++ SG +N I+N+L+ MY KCG+
Sbjct: 358 GIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGD 417
Query: 401 KEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSA 460
A VF+ M ++ +W +I+G+ AL++F M GVKP+++T++ +L A
Sbjct: 418 LRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQA 477
Query: 461 CSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAM 520
CSH G ++EG M + ++P +HYAC++D+LGR+ L EA E S P+ + +
Sbjct: 478 CSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPV 537
Query: 521 VWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMK 580
VWRS+L SCR+HGN +L A K + E EP Y+L+SN+Y ++ +V +R M+
Sbjct: 538 VWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMR 597
Query: 581 QKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTD 636
Q+ + K G SWI ++N VH F G+ +HP+ + I+D L + S + Y+ D
Sbjct: 598 QQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWLSLVISHMHGHEYMTVDD 653
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 189/398 (47%), Gaps = 15/398 (3%)
Query: 147 TLTSALTACAELELLSVGKQLHSWVIRSGLALDLC-VGCSLVDMYAKCAVDGSLVDSRRV 205
T + L CA+ + G+Q+H +++R G D G SLV+MYAKC G + + V
Sbjct: 62 TCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKC---GLMRRAVLV 118
Query: 206 FNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPD 265
F E +V + ALI+G+V +G +AM + +M + P+ +TF S+LK ++ +
Sbjct: 119 FGG-SERDVFGYNALISGFVV-NGSPLDAMETYREMRANGILPDKYTFPSLLKG-SDAME 175
Query: 266 FGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEK-SLVSCETIVD 324
+++H KLG + V + L+ Y++ +E A+K FD L ++ V +V+
Sbjct: 176 LSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVN 235
Query: 325 VIVRDLN-SDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFET 383
+ D L G+G T +LS G I G IH L VK+G +
Sbjct: 236 GYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGS 295
Query: 384 NLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEML 443
++ ++NALI MY K E A +F M +R++ TW S++ G L LF ML
Sbjct: 296 DIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERML 355
Query: 444 ETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEH----YACMVDVLGR 499
+G++P+ VT VL C + + +G + + G++ R + ++D+ +
Sbjct: 356 CSGIRPDIVTLTTVLPTCGRLASLRQG-REIHGYMIVSGLLNRKSSNEFIHNSLMDMYVK 414
Query: 500 SGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTEL 537
G L +A +SM + D+ W ++ V EL
Sbjct: 415 CGDLRDARMVFDSMRV-KDSASWNIMINGYGVQSCGEL 451
Score = 136 bits (342), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 168/328 (51%), Gaps = 12/328 (3%)
Query: 2 GSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVG 61
GS+RD+ + +++S F N +A+ T+ +M +G P++Y F + L+ S+++ S
Sbjct: 121 GSERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG-SDAMELSDV 179
Query: 62 RVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQER-NVVTWNLMMTRF 120
+ V G K G FDS VG L+ + K +E A +VF+++ +R + V WN ++ +
Sbjct: 180 KKVHGLAFKLG-FDSDCYVGSGLVTSYSKFMS-VEDAQKVFDELPDRDDSVLWNALVNGY 237
Query: 121 AQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDL 180
+Q+ ED++ +F +M G R T+TS L+A + G+ +H +++G D+
Sbjct: 238 SQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDI 297
Query: 181 CVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCD 240
V +L+DMY K L ++ +F +M E ++ +W +++ + G + LF
Sbjct: 298 VVSNALIDMYGKSKW---LEEANSIFEAMDERDLFTWNSVLCVHDY-CGDHDGTLALFER 353
Query: 241 MLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGL----SAVNCVANSLINMYA 296
ML + P+ T ++VL C L G ++H I GL S+ + NSL++MY
Sbjct: 354 MLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYV 413
Query: 297 RSGRLECARKCFDLLFEKSLVSCETIVD 324
+ G L AR FD + K S +++
Sbjct: 414 KCGDLRDARMVFDSMRVKDSASWNIMIN 441
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 151/322 (46%), Gaps = 34/322 (10%)
Query: 218 TALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTI 277
+AL + Y SGQ +E + + NVA T + L+ CA D+ G+Q+H +
Sbjct: 35 SALASLYSTVSGQIEENPKRY---EHHNVA----TCIATLQRCAQRKDYVSGQQIHGFMV 87
Query: 278 KLG-LSAVNCVANSLINMYARSGRLECARKCF-----DLLFEKSLVSCETIVDVIVRDLN 331
+ G L SL+NMYA+ G + A F D+ +L+S +V
Sbjct: 88 RKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGSERDVFGYNALIS-----GFVVNGSP 142
Query: 332 SDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNAL 391
D + GI +T+ LL G+ + + +++H L K GF+++ + + L
Sbjct: 143 LDAMETYREMRANGILPDKYTFPSLLKGSDAM-ELSDVKKVHGLAFKLGFDSDCYVGSGL 201
Query: 392 ISMYSKCGNKEAALQVFNDMGDR-NVITWTSIISGFAKHGYATKALELFYEMLETGVKPN 450
++ YSK + E A +VF+++ DR + + W ++++G+++ AL +F +M E GV +
Sbjct: 202 VTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVS 261
Query: 451 DVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYA------CMVDVLGRSGLLS 504
T +VLSA + G ID G R HG+ + + ++D+ G+S L
Sbjct: 262 RHTITSVLSAFTVSGDIDNG-------RSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLE 314
Query: 505 EAIEFINSMPLDADAMVWRSLL 526
EA +M + D W S+L
Sbjct: 315 EANSIFEAMD-ERDLFTWNSVL 335
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 312 bits (799), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 179/550 (32%), Positives = 302/550 (54%), Gaps = 19/550 (3%)
Query: 93 GDIESAHRVFEKMQERNVVTWNLMMTRFAQM-GYPEDSIDLFFRMLLSGYTPDRFTLTSA 151
GD + +F +E N ++N M+ E ++ L+ RM SG PD+FT
Sbjct: 79 GDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFV 138
Query: 152 LTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPE 211
ACA+LE + VG+ +HS + + GL D+ + SL+ MYAKC G + +R++F+ + E
Sbjct: 139 FIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKC---GQVGYARKLFDEITE 195
Query: 212 HNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQ 271
+ VSW ++I+GY +G ++AM LF M + P+ T S+L AC++L D G
Sbjct: 196 RDTVSWNSMISGYSE-AGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRL 254
Query: 272 LHSQTI--KLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRD 329
L I K+GLS + + LI+MY + G L+ AR+ F+ + +K V+ ++ V ++
Sbjct: 255 LEEMAITKKIGLSTF--LGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQN 312
Query: 330 LNSDETLNHETE-HTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSIN 388
S E E TG+ + T + +LS +G + G+QI + + N+ +
Sbjct: 313 GKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVA 372
Query: 389 NALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVK 448
L+ MY KCG E AL+VF M +N TW ++I+ +A G+A +AL LF M V
Sbjct: 373 TGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVP 429
Query: 449 PNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIE 508
P+D+T+I VLSAC H GL+ +G ++F+ M G+VP++EHY ++D+L R+G+L EA E
Sbjct: 430 PSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWE 489
Query: 509 FINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILE-REPHDPATYILLSNLYATEE 567
F+ P D ++ ++LG+C + + E A +M++E +E + Y++ SN+ A +
Sbjct: 490 FMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMK 549
Query: 568 RWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDT----SHPQAQKIYDEL-DEL 622
W + A +R M+ + ++K G SWIE+E ++ +F G + ++D L +E+
Sbjct: 550 MWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAGSDYLQCGREDSGSLFDLLVEEM 609
Query: 623 ASKIKKLGYV 632
+ + GY+
Sbjct: 610 KRERYEFGYI 619
Score = 186 bits (473), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 137/482 (28%), Positives = 228/482 (47%), Gaps = 18/482 (3%)
Query: 9 SWCSMMSCFANNSMEHEA-LVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGS 67
S+ M+ N +HEA L + M G P+++ + AC+ VGR V S
Sbjct: 98 SFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSS 157
Query: 68 VLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPE 127
+ K G + V + LI M+ K CG + A ++F+++ ER+ V+WN M++ +++ GY +
Sbjct: 158 LFKVG-LERDVHINHSLIMMYAK-CGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAK 215
Query: 128 DSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLV 187
D++DLF +M G+ PD TL S L AC+ L L G+ L I + L +G L+
Sbjct: 216 DAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLI 275
Query: 188 DMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVA 247
MY KC G L +RRVFN M + + V+WTA+I Y + +G+ EA +LF +M + V+
Sbjct: 276 SMYGKC---GDLDSARRVFNQMIKKDRVAWTAMITVYSQ-NGKSSEAFKLFFEMEKTGVS 331
Query: 248 PNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKC 307
P+ T S+VL AC ++ G+Q+ + +L L VA L++MY + GR+E A +
Sbjct: 332 PDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRV 391
Query: 308 FDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIG 367
F+ + K+ + ++ ++ E L + T+ +LS G +
Sbjct: 392 FEAMPVKNEATWNAMITAYAHQGHAKEALL--LFDRMSVPPSDITFIGVLSACVHAGLVH 449
Query: 368 KG-EQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDM-GDRNVITWTSIISG 425
+G H + G + +I + S+ G + A + G + I +I+
Sbjct: 450 QGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGA 509
Query: 426 FAKH---GYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHG 482
K KA+ + EM E N Y+ + + + + DE K MR G
Sbjct: 510 CHKRKDVAIREKAMRMLMEMKEA---KNAGNYVISSNVLADMKMWDESAKMRALMRD-RG 565
Query: 483 VV 484
VV
Sbjct: 566 VV 567
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/336 (32%), Positives = 171/336 (50%), Gaps = 18/336 (5%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR 62
++RD VSW SM+S ++ +A+ F M E GF P+E + L ACS+ GR
Sbjct: 194 TERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGR 253
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
++ + T +G +LI M+ K CGD++SA RVF +M +++ V W M+T ++Q
Sbjct: 254 LLEEMAI-TKKIGLSTFLGSKLISMYGK-CGDLDSARRVFNQMIKKDRVAWTAMITVYSQ 311
Query: 123 MGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCV 182
G ++ LFF M +G +PD TL++ L+AC + L +GKQ+ + L ++ V
Sbjct: 312 NGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYV 371
Query: 183 GCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDML 242
LVDMY KC G + ++ RVF +MP N +W A+I Y G +EA+ LF M
Sbjct: 372 ATGLVDMYGKC---GRVEEALRVFEAMPVKNEATWNAMITAYAH-QGHAKEALLLFDRM- 426
Query: 243 QGNVAPNGFTFSSVLKACANLPDFGFG-EQLHSQTIKLGLSAVNCVANSLINMYARSGRL 301
+V P+ TF VL AC + G H + GL ++I++ +R+G L
Sbjct: 427 --SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGML 484
Query: 302 ECA--------RKCFDLLFEKSLVSCETIVDVIVRD 329
+ A K +++ L +C DV +R+
Sbjct: 485 DEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIRE 520
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 311 bits (797), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 186/608 (30%), Positives = 325/608 (53%), Gaps = 11/608 (1%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
+RD+V W +M+ C++ + EA +M G P L S L + +
Sbjct: 109 ERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGP---VTLLEMLSGVLEITQLQC 165
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
+ + G FD ++V +++++ K C + A +F++M++R++V+WN M++ +A +
Sbjct: 166 LHDFAVIYG-FDCDIAVMNSMLNLYCK-CDHVGDAKDLFDQMEQRDMVSWNTMISGYASV 223
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVG 183
G + + L +RM G PD+ T ++L+ + L +G+ LH ++++G +D+ +
Sbjct: 224 GNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLK 283
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQ 243
+L+ MY KC + + S RV ++P +VV WT +I+G +R G+ ++A+ +F +MLQ
Sbjct: 284 TALITMYLKCGKEEA---SYRVLETIPNKDVVCWTVMISGLMR-LGRAEKALIVFSEMLQ 339
Query: 244 GNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLEC 303
+ +SV+ +CA L F G +H ++ G + NSLI MYA+ G L+
Sbjct: 340 SGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDK 399
Query: 304 ARKCFDLLFEKSLVSCETIVDVIVR--DLNSDETLNHETEHTTGIGACSFTYACLLSGAA 361
+ F+ + E+ LVS I+ + DL L E + T SFT LL +
Sbjct: 400 SLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACS 459
Query: 362 CIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTS 421
G + G+ IH +V++S ++ AL+ MYSKCG EAA + F+ + ++V++W
Sbjct: 460 SAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGI 519
Query: 422 IISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCH 481
+I+G+ HG ALE++ E L +G++PN V ++AVLS+CSH G++ +G K F+SM
Sbjct: 520 LIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDF 579
Query: 482 GVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHA 541
GV P EH AC+VD+L R+ + +A +F V +L +CR +G TE+ +
Sbjct: 580 GVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDII 639
Query: 542 AKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHK 601
+ ++E +P D Y+ L + +A +RW DV+ M+ + K G+S IE+ +
Sbjct: 640 CEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTT 699
Query: 602 FHVGDTSH 609
F + TSH
Sbjct: 700 FFMNHTSH 707
Score = 206 bits (524), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 144/522 (27%), Positives = 256/522 (49%), Gaps = 25/522 (4%)
Query: 25 EALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCEL 84
+ L TF ML + P+ + F + L+AC++ S G + VL G F S + L
Sbjct: 29 QVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNG-FSSDFYISSSL 87
Query: 85 IDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPD 144
++++ K G + A +VFE+M+ER+VV W M+ +++ G ++ L M G P
Sbjct: 88 VNLYAK-FGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPG 146
Query: 145 RFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRR 204
TL L+ E+ L LH + + G D+ V S++++Y KC G D++
Sbjct: 147 PVTLLEMLSGVLEITQLQC---LHDFAVIYGFDCDIAVMNSMLNLYCKCDHVG---DAKD 200
Query: 205 VFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLP 264
+F+ M + ++VSW +I+GY G E ++L M + P+ TF + L +
Sbjct: 201 LFDQMEQRDMVSWNTMISGYA-SVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMC 259
Query: 265 DFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVD 324
D G LH Q +K G + +LI MY + G+ E + + + + K +V ++
Sbjct: 260 DLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMIS 319
Query: 325 VIVRDLNSDETLNHETEH-TTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFET 383
++R +++ L +E +G S A +++ A +G+ G +H V++ G+
Sbjct: 320 GLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTL 379
Query: 384 NLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEM- 442
+ N+LI+MY+KCG+ + +L +F M +R++++W +IISG+A++ KAL LF EM
Sbjct: 380 DTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMK 439
Query: 443 LETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYAC------MVDV 496
+T + + T +++L ACS G + G + HC +V R C +VD+
Sbjct: 440 FKTVQQVDSFTVVSLLQACSSAGALPVG-----KLIHC--IVIRSFIRPCSLVDTALVDM 492
Query: 497 LGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELG 538
+ G L A +S+ D + W L+ HG ++
Sbjct: 493 YSKCGYLEAAQRCFDSISW-KDVVSWGILIAGYGFHGKGDIA 533
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/416 (28%), Positives = 202/416 (48%), Gaps = 12/416 (2%)
Query: 113 WNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVI 172
+N + + G + + F ML + PD FT S L ACA L+ LS G +H V+
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 173 RSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQ 232
+G + D + SLV++YAK G L +R+VF M E +VV WTA+I Y R +G
Sbjct: 74 VNGFSSDFYISSSLVNLYAKF---GLLAHARKVFEEMRERDVVHWTAMIGCYSR-AGIVG 129
Query: 233 EAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLI 292
EA L +M + P T +L + + LH + G V NS++
Sbjct: 130 EACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQL---QCLHDFAVIYGFDCDIAVMNSML 186
Query: 293 NMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETE-HTTGIGACSF 351
N+Y + + A+ FD + ++ +VS T++ N E L G+
Sbjct: 187 NLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQ 246
Query: 352 TYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDM 411
T+ LS + + + G +H +VK+GF+ ++ + ALI+MY KCG +EA+ +V +
Sbjct: 247 TFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETI 306
Query: 412 GDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGW 471
+++V+ WT +ISG + G A KAL +F EML++G + +V+++C+ +G D G
Sbjct: 307 PNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGA 366
Query: 472 K-HFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLL 526
H +R HG ++ + + G L +++ M + D + W +++
Sbjct: 367 SVHGYVLR--HGYTLDTPALNSLITMYAKCGHLDKSLVIFERMN-ERDLVSWNAII 419
Score = 126 bits (316), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 146/287 (50%), Gaps = 21/287 (7%)
Query: 198 SLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVL 257
S+++S + FNS H + G ++ + F ML + P+ FTF S+L
Sbjct: 6 SVLNSTKYFNSHINH------------LSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLL 53
Query: 258 KACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLV 317
KACA+L FG +H Q + G S+ +++SL+N+YA+ G L ARK F+ + E+ +V
Sbjct: 54 KACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVV 113
Query: 318 SCETIVDVIVRDLNSDETLNHETE-HTTGIGACSFTYACLLSGAACIGTIGKGEQIHALV 376
++ R E + E GI T +LSG + I + + +H
Sbjct: 114 HWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSG---VLEITQLQCLHDFA 170
Query: 377 VKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKAL 436
V GF+ ++++ N+++++Y KC + A +F+ M R++++W ++ISG+A G ++ L
Sbjct: 171 VIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEIL 230
Query: 437 ELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGV 483
+L Y M G++P+ T+ A LS + ++ G M HC V
Sbjct: 231 KLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMG-----RMLHCQIV 272
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 97/172 (56%), Gaps = 3/172 (1%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDM-LEHGFYPNEYCFTAALRACSNSLYFSVG 61
++RDLVSW +++S +A N +AL+ F +M + + + + L+ACS++ VG
Sbjct: 408 NERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVG 467
Query: 62 RVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFA 121
+++ V+++ + V L+DM+ K CG +E+A R F+ + ++VV+W +++ +
Sbjct: 468 KLIHCIVIRS-FIRPCSLVDTALVDMYSK-CGYLEAAQRCFDSISWKDVVSWGILIAGYG 525
Query: 122 QMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIR 173
G + +++++ L SG P+ + L++C+ ++ G ++ S ++R
Sbjct: 526 FHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVR 577
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 310 bits (794), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 191/667 (28%), Positives = 348/667 (52%), Gaps = 47/667 (7%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSN---SLYFS 59
+ +D+VSW ++++ F+ N+M +A +F ML+ PN L C++ ++
Sbjct: 185 ADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACR 244
Query: 60 VGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTR 119
GR + V++ + +HV V L+ +++ G IE A +F +M +++V+WN+++
Sbjct: 245 SGRQIHSYVVQRSWLQTHVFVCNSLVSFYLR-VGRIEEAASLFTRMGSKDLVSWNVVIAG 303
Query: 120 FAQMGYPEDSIDLFFRMLLSG-YTPDRFTLTSALTACAELELLSVGKQLHSWVIR-SGLA 177
+A + LF ++ G +PD T+ S L CA+L L+ GK++HS+++R S L
Sbjct: 304 YASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLL 363
Query: 178 LDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRL 237
D VG +L+ YA+ G + F+ M +++SW A++ + Q Q L
Sbjct: 364 EDTSVGNALISFYARF---GDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLL 420
Query: 238 FCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGL---SAVNCVANSLINM 294
+ + + + T S+LK C N+ G +++H ++K GL + N+L++
Sbjct: 421 HHLLNEA-ITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDA 479
Query: 295 YARSGRLECARKCFDLLFEK-SLVSCETIVDVIVRDLNSDETLNHETEHTT--------- 344
YA+ G +E A K F L E+ +LVS +++ V + D+ TE +T
Sbjct: 480 YAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLM 539
Query: 345 -----------------------GIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGF 381
G+ + T LL A + ++ Q H +++ G
Sbjct: 540 VRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGL 599
Query: 382 ETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYE 441
++ + L+ +Y+KCG+ + A VF R+++ +T++++G+A HG +AL ++
Sbjct: 600 -GDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSH 658
Query: 442 MLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSG 501
M E+ +KP+ V +L+AC H GLI +G + ++S+R HG+ P +E YAC VD++ R G
Sbjct: 659 MTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGG 718
Query: 502 LLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSN 561
L +A F+ MP++ +A +W +LL +C + +LG A +L+ E D ++L+SN
Sbjct: 719 RLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISN 778
Query: 562 LYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELDE 621
+YA + +W V +R MK+K++ K AG SW+EV+ Q + F GD SHP+ I+D ++
Sbjct: 779 MYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIFDLVNA 838
Query: 622 LASKIKK 628
L ++K+
Sbjct: 839 LYLQMKE 845
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 123/439 (28%), Positives = 213/439 (48%), Gaps = 14/439 (3%)
Query: 34 LEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCG 93
L GF + F ++AC++ + GR + G V K G+ V +++M+ K C
Sbjct: 13 LLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACS-EVSKSVLNMYAK-CR 70
Query: 94 DIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYT-PDRFTLTSAL 152
++ ++F +M + V WN+++T + + +++ F M + P T L
Sbjct: 71 RMDDCQKMFRQMDSLDPVVWNIVLTGLS-VSCGRETMRFFKAMHFADEPKPSSVTFAIVL 129
Query: 153 TACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH 212
C L GK +HS++I++GL D VG +LV MYAK D+ F+ + +
Sbjct: 130 PLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGF--IFPDAYTAFDGIADK 187
Query: 213 NVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPD---FGFG 269
+VVSW A+IAG+ + +A R FC ML+ PN T ++VL CA++ G
Sbjct: 188 DVVSWNAIIAGFSE-NNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSG 246
Query: 270 EQLHSQTIKLG-LSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVR 328
Q+HS ++ L V NSL++ Y R GR+E A F + K LVS ++
Sbjct: 247 RQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYAS 306
Query: 329 DLNSDET--LNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGF-ETNL 385
+ + L H H + S T +L A + + G++IH+ +++ + +
Sbjct: 307 NCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDT 366
Query: 386 SINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLET 445
S+ NALIS Y++ G+ AA F+ M +++I+W +I+ FA + L L + +L
Sbjct: 367 SVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNE 426
Query: 446 GVKPNDVTYIAVLSACSHV 464
+ + VT +++L C +V
Sbjct: 427 AITLDSVTILSLLKFCINV 445
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 132/278 (47%), Gaps = 31/278 (11%)
Query: 253 FSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLF 312
F V+KACA++ D G LH KLG A + V+ S++NMYA+ R++ +K F
Sbjct: 24 FLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMF---- 79
Query: 313 EKSLVSCETIV-DVIVRDLN---SDETLN--HETEHTTGIGACSFTYACLLSGAACIGTI 366
+ + S + +V ++++ L+ ET+ S T+A +L +G
Sbjct: 80 -RQMDSLDPVVWNIVLTGLSVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDS 138
Query: 367 GKGEQIHALVVKSGFETNLSINNALISMYSKCGNK-EAALQVFNDMGDRNVITWTSIISG 425
G+ +H+ ++K+G E + + NAL+SMY+K G A F+ + D++V++W +II+G
Sbjct: 139 YNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAG 198
Query: 426 FAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACS--------------HVGLIDEGW 471
F+++ A F ML+ +PN T VL C+ H ++ W
Sbjct: 199 FSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSW 258
Query: 472 KHF-----NSMRHCHGVVPRVEHYACMVDVLGRSGLLS 504
NS+ + V R+E A + +G L+S
Sbjct: 259 LQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVS 296
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 307 bits (787), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 186/560 (33%), Positives = 308/560 (55%), Gaps = 22/560 (3%)
Query: 45 FTAALRACSNSLYFSVGR---VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRV 101
+ AL+ CS Y +V + ++ G+ + G F S++ + LID+++K GD++ A ++
Sbjct: 15 YLKALKLCS---YQNVKKQLLLIHGNSITNG-FCSNLQLKDMLIDLYLKQ-GDVKHARKL 69
Query: 102 FEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELL 161
F+++ +R+VV+W M++RF++ GY D++ LF M ++FT S L +C +L L
Sbjct: 70 FDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCL 129
Query: 162 SVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALI 221
G Q+H V + A +L V +L+ +YA+C G + ++R F+SM E ++VSW A+I
Sbjct: 130 KEGMQIHGSVEKGNCAGNLIVRSALLSLYARC---GKMEEARLQFDSMKERDLVSWNAMI 186
Query: 222 AGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGL 281
GY + + + LF ML P+ FTF S+L+A + +LH IKLG
Sbjct: 187 DGYTANACADT-SFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGF 245
Query: 282 SAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLN--SD--ETLN 337
+ + SL+N Y + G L A K + ++ L+SC ++ + N SD +
Sbjct: 246 GRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFK 305
Query: 338 HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSG-FETNLSINNALISMYS 396
T + + +L I ++ G QIH +KS ++++ N+LI MY+
Sbjct: 306 DMIRMKTKMD--EVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYA 363
Query: 397 KCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIA 456
K G E A+ F +M +++V +WTS+I+G+ +HG KA++L+ M +KPNDVT+++
Sbjct: 364 KSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLS 423
Query: 457 VLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMP-- 514
+LSACSH G + GWK +++M + HG+ R EH +C++D+L RSG L EA I S
Sbjct: 424 LLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGI 483
Query: 515 LDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAA 574
+ + W + L +CR HGN +L + AA +L EP P YI L+++YA W +
Sbjct: 484 VSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALN 543
Query: 575 IRKTMKQKKIIKEA-GYSWI 593
RK MK+ +A GYS +
Sbjct: 544 TRKLMKESGSCNKAPGYSLV 563
Score = 162 bits (410), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 122/435 (28%), Positives = 211/435 (48%), Gaps = 13/435 (2%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR 62
SKRD+VSW +M+S F+ +AL+ F +M N++ + + L++C + G
Sbjct: 74 SKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGM 133
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
+ GSV K G ++ V L+ ++ + CG +E A F+ M+ER++V+WN M+ +
Sbjct: 134 QIHGSVEK-GNCAGNLIVRSALLSLYAR-CGKMEEARLQFDSMKERDLVSWNAMIDGYTA 191
Query: 123 MGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCV 182
+ S LF ML G PD FT S L A ++ L + +LH I+ G +
Sbjct: 192 NACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSAL 251
Query: 183 GCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDML 242
SLV+ Y KC GSL ++ ++ + +++S TALI G+ + + +A +F DM+
Sbjct: 252 IRSLVNAYVKC---GSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMI 308
Query: 243 QGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVN-CVANSLINMYARSGRL 301
+ + SS+LK C + G Q+H +K + + NSLI+MYA+SG +
Sbjct: 309 RMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEI 368
Query: 302 ECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN--HETEHTTGIGACSFTYACLLSG 359
E A F+ + EK + S +++ R N ++ ++ + EH I T+ LLS
Sbjct: 369 EDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHER-IKPNDVTFLSLLSA 427
Query: 360 AACIGTIGKGEQIH-ALVVKSGFETNLSINNALISMYSKCGNKEAALQVFND---MGDRN 415
+ G G +I+ ++ K G E + +I M ++ G E A + + +
Sbjct: 428 CSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLS 487
Query: 416 VITWTSIISGFAKHG 430
TW + + +HG
Sbjct: 488 SSTWGAFLDACRRHG 502
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 306 bits (785), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 173/554 (31%), Positives = 306/554 (55%), Gaps = 14/554 (2%)
Query: 45 FTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEK 104
+ + L+ C+ F G V+K+G ++ +VG L+ ++ K + RVF+
Sbjct: 64 YASLLQTCNKVFSFIHGIQFHAHVVKSG-LETDRNVGNSLLSLYFKLGPGMRETRRVFDG 122
Query: 105 MQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVG 164
++ ++W MM+ + ++++F M+ G + FTL+SA+ AC+EL + +G
Sbjct: 123 RFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLG 182
Query: 165 KQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGY 224
+ H VI G + + +L +Y V+ VD+RRVF+ MPE +V+ WTA+++ +
Sbjct: 183 RCFHGVVITHGFEWNHFISSTLAYLYG---VNREPVDARRVFDEMPEPDVICWTAVLSAF 239
Query: 225 VRGSGQEQEAMRLFCDMLQGN-VAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSA 283
+ E EA+ LF M +G + P+G TF +VL AC NL G+++H + I G+ +
Sbjct: 240 SKNDLYE-EALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGS 298
Query: 284 VNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN--HETE 341
V +SL++MY + G + AR+ F+ + +K+ VS ++ ++ ++ + E E
Sbjct: 299 NVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREME 358
Query: 342 HTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNK 401
+ + +L A + + G++IH V+ G N+ + +ALI +Y K G
Sbjct: 359 EKD-----LYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCI 413
Query: 402 EAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSAC 461
++A +V++ M RN+ITW +++S A++G +A+ F +M++ G+KP+ +++IA+L+AC
Sbjct: 414 DSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTAC 473
Query: 462 SHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMV 521
H G++DEG +F M +G+ P EHY+CM+D+LGR+GL EA + DA +
Sbjct: 474 GHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASL 533
Query: 522 WRSLLGSCRVHGN-TELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMK 580
W LLG C + + + + E AK ++E EP +Y+LLSN+Y R D IRK M
Sbjct: 534 WGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMV 593
Query: 581 QKKIIKEAGYSWIE 594
++ + K G SWI+
Sbjct: 594 RRGVAKTVGQSWID 607
Score = 186 bits (473), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 230/437 (52%), Gaps = 14/437 (3%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
+D +SW SMMS + +AL F++M+ G NE+ ++A++ACS +GR
Sbjct: 126 KDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCF 185
Query: 65 FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG 124
G V+ G+ +H + L ++ ++ A RVF++M E +V+ W +++ F++
Sbjct: 186 HGVVITHGFEWNHF-ISSTLAYLYGVNREPVD-ARRVFDEMPEPDVICWTAVLSAFSKND 243
Query: 125 YPEDSIDLFFRMLLS-GYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVG 183
E+++ LF+ M G PD T + LTAC L L GK++H +I +G+ ++ V
Sbjct: 244 LYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVE 303
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQ 243
SL+DMY KC GS+ ++R+VFN M + N VSW+AL+ GY + +G+ ++A+ +F +M +
Sbjct: 304 SSLLDMYGKC---GSVREARQVFNGMSKKNSVSWSALLGGYCQ-NGEHEKAIEIFREMEE 359
Query: 244 GNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLEC 303
++ + F +VLKACA L G+++H Q ++ G V ++LI++Y +SG ++
Sbjct: 360 KDL----YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDS 415
Query: 304 ARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHT-TGIGACSFTYACLLSGAAC 362
A + + + +++++ ++ + ++ +E ++ + GI ++ +L+
Sbjct: 416 ASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGH 475
Query: 363 IGTIGKGEQIHALVVKS-GFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVIT-WT 420
G + +G L+ KS G + + +I + + G E A + RN + W
Sbjct: 476 TGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWG 535
Query: 421 SIISGFAKHGYATKALE 437
++ A + A++ E
Sbjct: 536 VLLGPCAANADASRVAE 552
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 161/331 (48%), Gaps = 10/331 (3%)
Query: 229 GQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVA 288
GQ EA+R+ + ++S+L+ C + F G Q H+ +K GL V
Sbjct: 40 GQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVG 99
Query: 289 NSLINMYARSGR-LECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTT-GI 346
NSL+++Y + G + R+ FD F K +S +++ V + L E + G+
Sbjct: 100 NSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGL 159
Query: 347 GACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQ 406
A FT + + + +G + G H +V+ GFE N I++ L +Y A +
Sbjct: 160 DANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARR 219
Query: 407 VFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLE-TGVKPNDVTYIAVLSACSHVG 465
VF++M + +VI WT+++S F+K+ +AL LFY M G+ P+ T+ VL+AC ++
Sbjct: 220 VFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLR 279
Query: 466 LIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSL 525
+ +G K + +G+ V + ++D+ G+ G + EA + N M +++ W +L
Sbjct: 280 RLKQG-KEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMS-KKNSVSWSAL 337
Query: 526 LGSCRVHGNTELGEHAAKMILEREPHDPATY 556
LG G + GEH + + RE + Y
Sbjct: 338 LG-----GYCQNGEHEKAIEIFREMEEKDLY 363
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 89/165 (53%), Gaps = 8/165 (4%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR 62
SK++ VSW +++ + N +A+ F +M E YCF L+AC+ +G+
Sbjct: 327 SKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDL----YCFGTVLKACAGLAAVRLGK 382
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVK-GCGDIESAHRVFEKMQERNVVTWNLMMTRFA 121
+ G ++ G F +V V LID++ K GC I+SA RV+ KM RN++TWN M++ A
Sbjct: 383 EIHGQYVRRGCF-GNVIVESALIDLYGKSGC--IDSASRVYSKMSIRNMITWNAMLSALA 439
Query: 122 QMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQ 166
Q G E+++ F M+ G PD + + LTAC ++ G+
Sbjct: 440 QNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRN 484
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 301 bits (772), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 185/580 (31%), Positives = 298/580 (51%), Gaps = 16/580 (2%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
+RD V W +++ ++ N E +A F+ ML+ GF P+ L C + S GR
Sbjct: 113 ERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRS 172
Query: 64 VFGSVLKTGY-FDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
V G K+G DS V LI + K C ++ SA +F +M++++ V+WN M+ ++Q
Sbjct: 173 VHGVAAKSGLELDSQVKNA--LISFYSK-CAELGSAEVLFREMKDKSTVSWNTMIGAYSQ 229
Query: 123 MGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCV 182
G E++I +F M T+ + L+A E LH V++ G+ D+ V
Sbjct: 230 SGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHE------PLHCLVVKCGMVNDISV 283
Query: 183 GCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDML 242
SLV Y++C G LV + R++ S + ++V T++++ Y G A+ F
Sbjct: 284 VTSLVCAYSRC---GCLVSAERLYASAKQDSIVGLTSIVSCYAE-KGDMDIAVVYFSKTR 339
Query: 243 QGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLE 302
Q + + +L C G LH IK GL V N LI MY++ +E
Sbjct: 340 QLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVE 399
Query: 303 CARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN--HETEHTTGIGACSFTYACLLSGA 360
F+ L E L+S +++ V+ + H+ T G+ + T A LL+G
Sbjct: 400 TVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGC 459
Query: 361 ACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWT 420
+ + + G+++H +++ FE + ALI MY+KCGN+ A VF + TW
Sbjct: 460 SQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWN 519
Query: 421 SIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHC 480
S+ISG++ G +AL + EM E G+KP+++T++ VLSAC+H G +DEG F +M
Sbjct: 520 SMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKE 579
Query: 481 HGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEH 540
G+ P ++HYA MV +LGR+ L +EA+ I M + D+ VW +LL +C +H E+GE+
Sbjct: 580 FGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEY 639
Query: 541 AAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMK 580
A+ + + + Y+L+SNLYATE W DV +R MK
Sbjct: 640 VARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMK 679
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 153/549 (27%), Positives = 263/549 (47%), Gaps = 50/549 (9%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACS---NSLYFSVG 61
RDL + S++ + + + F D+L PN + + L+A + NS V
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVE 70
Query: 62 RVVFGSVLKTGYFDSHVSVGCELIDMFVK-GCGDIESAHRVFEKMQERNVVTWNLMMTRF 120
+V + K+G D V V L+++++K GC + SA +F++M ER+ V WN ++ +
Sbjct: 71 QVQ-THLTKSG-LDRFVYVKTSLLNLYLKKGC--VTSAQMLFDEMPERDTVVWNALICGY 126
Query: 121 AQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDL 180
++ GY D+ LF ML G++P TL + L C + +S G+ +H +SGL LD
Sbjct: 127 SRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDS 186
Query: 181 CVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCD 240
V +L+ Y+KCA GS + +F M + + VSW +I Y + SG ++EA+ +F +
Sbjct: 187 QVKNALISFYSKCAELGS---AEVLFREMKDKSTVSWNTMIGAYSQ-SGLQEEAITVFKN 242
Query: 241 MLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGR 300
M + NV + T ++L A + E LH +K G+ V SL+ Y+R G
Sbjct: 243 MFEKNVEISPVTIINLLSAHVS------HEPLHCLVVKCGMVNDISVVTSLVCAYSRCGC 296
Query: 301 LECARKCFDLLFEKSLVSCETIV---------DVIVRDLNSDETLNHETEHTTGIGACSF 351
L A + + + S+V +IV D+ V + L + + +G
Sbjct: 297 LVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVG---- 352
Query: 352 TYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDM 411
+L G I G +H +KSG T + N LI+MYSK + E L +F +
Sbjct: 353 ----ILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQL 408
Query: 412 GDRNVITWTSIISGFAKHGYATKALELFYEMLET-GVKPNDVTYIAVLSACSHVGLIDEG 470
+ +I+W S+ISG + G A+ A E+F++M+ T G+ P+ +T ++L+ CS + ++ G
Sbjct: 409 QETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLG 468
Query: 471 WKHFNSMRHCHGVVPR----VEHYAC--MVDVLGRSGLLSEAIEFINSMPLDADAMVWRS 524
+ HG R E++ C ++D+ + G +A S+ A W S
Sbjct: 469 -------KELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTA-TWNS 520
Query: 525 LLGSCRVHG 533
++ + G
Sbjct: 521 MISGYSLSG 529
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 301 bits (772), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 178/545 (32%), Positives = 283/545 (51%), Gaps = 65/545 (11%)
Query: 148 LTSALTACAELELLSVGKQLHSWVIRSGLAL-DLCVGCSLVDMYAKCA--VD-------- 196
L S L C + + L GK +H + +G + + L+ MY KC +D
Sbjct: 49 LASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQM 108
Query: 197 ------------------GSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLF 238
G LV +R VF+SMPE +VVSW ++ GY + G EA+ +
Sbjct: 109 HLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQ-DGNLHEALWFY 167
Query: 239 CDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARS 298
+ + + N F+F+ +L AC Q H Q + G + ++ S+I+ YA+
Sbjct: 168 KEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKC 227
Query: 299 GRLECARKCFD---------------------------LLF----EKSLVSCETIVDVIV 327
G++E A++CFD LF EK+ VS ++ V
Sbjct: 228 GQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYV 287
Query: 328 RDLNSDETLN-HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLS 386
R + + L+ G+ FT++ L +A I ++ G++IH ++++ N
Sbjct: 288 RQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAI 347
Query: 387 INNALISMYSKCGNKEAALQVFNDMGDR-NVITWTSIISGFAKHGYATKALELFYEMLET 445
+ ++LI MYSK G+ EA+ +VF D+ + + W ++IS A+HG KAL + +M++
Sbjct: 348 VISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKF 407
Query: 446 GVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSE 505
V+PN T + +L+ACSH GL++EG + F SM HG+VP EHYAC++D+LGR+G E
Sbjct: 408 RVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKE 467
Query: 506 AIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYAT 565
+ I MP + D +W ++LG CR+HGN ELG+ AA +++ +P A YILLS++YA
Sbjct: 468 LMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYAD 527
Query: 566 EERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQK--IYDELDELA 623
+W V +R MK++++ KE SWIE+E +V F V D SH A+K IY L LA
Sbjct: 528 HGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNLA 587
Query: 624 SKIKK 628
+ I++
Sbjct: 588 AVIEE 592
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 168/345 (48%), Gaps = 42/345 (12%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
+RD+VSW +M+ +A + HEAL + + G NE+ F L AC S + R
Sbjct: 141 ERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQ 200
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKM------------------ 105
G VL G+ S+V + C +ID + K CG +ESA R F++M
Sbjct: 201 AHGQVLVAGFL-SNVVLSCSIIDAYAK-CGQMESAKRCFDEMTVKDIHIWTTLISGYAKL 258
Query: 106 -------------QERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSAL 152
E+N V+W ++ + + G ++DLF +M+ G P++FT +S L
Sbjct: 259 GDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCL 318
Query: 153 TACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPE- 211
A A + L GK++H ++IR+ + + V SL+DMY+K GSL S RVF +
Sbjct: 319 CASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSK---SGSLEASERVFRICDDK 375
Query: 212 HNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACAN--LPDFGFG 269
H+ V W +I+ + G +A+R+ DM++ V PN T +L AC++ L + G
Sbjct: 376 HDCVFWNTMISALAQ-HGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGL- 433
Query: 270 EQLHSQTIKLGLSAVNCVANSLINMYARSGRL-ECARKCFDLLFE 313
S T++ G+ LI++ R+G E RK ++ FE
Sbjct: 434 RWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFE 478
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/259 (32%), Positives = 131/259 (50%), Gaps = 30/259 (11%)
Query: 84 LIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTP 143
++ +VK G + A VF+ M ER+VV+WN M+ +AQ G +++ + SG
Sbjct: 119 MVSGYVKS-GMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKF 177
Query: 144 DRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKC---------- 193
+ F+ LTAC + L + +Q H V+ +G ++ + CS++D YAKC
Sbjct: 178 NEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCF 237
Query: 194 ------------------AVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAM 235
A G + + ++F MPE N VSWTALIAGYVR G A+
Sbjct: 238 DEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVR-QGSGNRAL 296
Query: 236 RLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMY 295
LF M+ V P FTFSS L A A++ G+++H I+ + V +SLI+MY
Sbjct: 297 DLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMY 356
Query: 296 ARSGRLECARKCFDLLFEK 314
++SG LE + + F + +K
Sbjct: 357 SKSGSLEASERVFRICDDK 375
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 300 bits (769), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 173/562 (30%), Positives = 296/562 (52%), Gaps = 65/562 (11%)
Query: 93 GDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSAL 152
G++ A R+F M E++VVT N ++ + GY E+++ LF + ++ D TLT+ L
Sbjct: 138 GELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADAITLTTVL 194
Query: 153 TACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKC------------------- 193
ACAELE L GKQ+H+ ++ G+ D + SLV++YAKC
Sbjct: 195 KACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDH 254
Query: 194 ---------AVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQG 244
A G + +SR +F+ V+ W ++I+GY+ + + EA+ LF +M +
Sbjct: 255 SLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYI-ANNMKMEALVLFNEM-RN 312
Query: 245 NVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYAR------- 297
+ T ++V+ AC L G+Q+H K GL VA++L++MY++
Sbjct: 313 ETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEA 372
Query: 298 ------------------------SGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSD 333
GR++ A++ F+ + KSL+S ++ + ++ +
Sbjct: 373 CKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTV 432
Query: 334 ETLNH-ETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALI 392
ETL + H + + + ++S A I ++ GEQ+ A G +++ ++++LI
Sbjct: 433 ETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLI 492
Query: 393 SMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDV 452
+Y KCG E +VF+ M + + W S+ISG+A +G +A++LF +M G++P +
Sbjct: 493 DLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQI 552
Query: 453 TYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINS 512
T++ VL+AC++ GL++EG K F SM+ HG VP EH++CMVD+L R+G + EAI +
Sbjct: 553 TFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEE 612
Query: 513 MPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDV 572
MP D D +W S+L C +G +G+ AA+ I+E EP + Y+ LS ++AT W
Sbjct: 613 MPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESS 672
Query: 573 AAIRKTMKQKKIIKEAGYSWIE 594
A +RK M++ + K G SW +
Sbjct: 673 ALVRKLMRENNVTKNPGSSWTD 694
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 157/333 (47%), Gaps = 37/333 (11%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR 62
S R ++ W SM+S + N+M+ EALV F +M + + A + AC + G+
Sbjct: 280 SNRCVILWNSMISGYIANNMKMEALVLFNEM-RNETREDSRTLAAVINACIGLGFLETGK 338
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVK------------------------------GC 92
+ K G D V V L+DM+ K C
Sbjct: 339 QMHCHACKFGLIDDIV-VASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSC 397
Query: 93 GDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSAL 152
G I+ A RVFE+++ +++++WN M F+Q G ++++ F +M D +L+S +
Sbjct: 398 GRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVI 457
Query: 153 TACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH 212
+ACA + L +G+Q+ + GL D V SL+D+Y KC G + RRVF++M +
Sbjct: 458 SACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKC---GFVEHGRRVFDTMVKS 514
Query: 213 NVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQL 272
+ V W ++I+GY +GQ EA+ LF M + P TF VL AC G +L
Sbjct: 515 DEVPWNSMISGYAT-NGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKL 573
Query: 273 -HSQTIKLGLSAVNCVANSLINMYARSGRLECA 304
S + G + ++++ AR+G +E A
Sbjct: 574 FESMKVDHGFVPDKEHFSCMVDLLARAGYVEEA 606
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 174/391 (44%), Gaps = 87/391 (22%)
Query: 152 LTACAELELLSVGKQLHSWVIRSG-LALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMP 210
L +C+ ++ +Q + +++ G L+ + V L+ MY++ G + +R +F+ MP
Sbjct: 33 LQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSR---SGKMGIARNLFDEMP 89
Query: 211 EHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGE 270
+ N SW +I GY+ SG++ ++R F DM+ +G+++
Sbjct: 90 DRNYFSWNTMIEGYM-NSGEKGTSLRFF-DMMP---ERDGYSW----------------- 127
Query: 271 QLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDL 330
N +++ +A++G L AR+ F+ + EK +V+ +++ + +
Sbjct: 128 ------------------NVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNG 169
Query: 331 NSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNA 390
++E L E A + T +L A + + G+QIHA ++ G E + +N++
Sbjct: 170 YAEEALRLFKE--LNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSS 227
Query: 391 LISMYSKCGNKEAA-------------------------------LQVFNDMGDRNVITW 419
L+++Y+KCG+ A +F+ +R VI W
Sbjct: 228 LVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILW 287
Query: 420 TSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRH 479
S+ISG+ + +AL LF EM + + T AV++AC +G ++ G H
Sbjct: 288 NSMISGYIANNMKMEALVLFNEM-RNETREDSRTLAAVINACIGLGFLETG-----KQMH 341
Query: 480 CH----GVVPRVEHYACMVDVLGRSGLLSEA 506
CH G++ + + ++D+ + G EA
Sbjct: 342 CHACKFGLIDDIVVASTLLDMYSKCGSPMEA 372
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 116/261 (44%), Gaps = 55/261 (21%)
Query: 253 FSSVLKACANLPDFGFGEQLHSQTIKLG-LSAVNCVANSLINMYARSGRLECARKCFDLL 311
+ +L++C++ Q + +K G LS++ VAN L+ MY+RSG++ AR FD +
Sbjct: 29 YVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEM 88
Query: 312 FEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQ 371
+++ S T+++ G + GE+
Sbjct: 89 PDRNYFSWNTMIE---------------------------------------GYMNSGEK 109
Query: 372 IHALVV------KSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISG 425
+L + G+ N+ ++S ++K G A ++FN M +++V+T S++ G
Sbjct: 110 GTSLRFFDMMPERDGYSWNV-----VVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHG 164
Query: 426 FAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVP 485
+ +GYA +AL LF E+ + +T VL AC+ + + G K ++ GV
Sbjct: 165 YILNGYAEEALRLFKEL---NFSADAITLTTVLKACAELEALKCG-KQIHAQILIGGVEC 220
Query: 486 RVEHYACMVDVLGRSGLLSEA 506
+ + +V+V + G L A
Sbjct: 221 DSKMNSSLVNVYAKCGDLRMA 241
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 10/160 (6%)
Query: 371 QIHALVVKSGFETNLSI-NNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKH 429
Q + L++K GF +++ I N L+ MYS+ G A +F++M DRN +W ++I G+
Sbjct: 47 QTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNS 106
Query: 430 GYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEH 489
G +L F M E + ++ V+S + G + + FN+M V
Sbjct: 107 GEKGTSLRFFDMMPER----DGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLL 162
Query: 490 YACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSC 529
+ +++ G EA+ + ADA+ ++L +C
Sbjct: 163 HGYILN-----GYAEEALRLFKELNFSADAITLTTVLKAC 197
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 300 bits (769), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 202/628 (32%), Positives = 323/628 (51%), Gaps = 26/628 (4%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
RD VSW ++ + E E L F + GF PN + AC SL+F G +
Sbjct: 90 RDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHAC-RSLWFD-GEKI 147
Query: 65 FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG 124
G V+++G F SV ++ M+ D SA ++F++M ER+V++W++++ + Q
Sbjct: 148 HGYVIRSG-FCGISSVQNSILCMYADS--DSLSARKLFDEMSERDVISWSVVIRSYVQSK 204
Query: 125 YPEDSIDLFFRMLLSGYT-PDRFTLTSALTACAELELLSVGKQLHSWVIRSGLAL-DLCV 182
P + LF M+ T PD T+TS L AC +E + VG+ +H + IR G L D+ V
Sbjct: 205 EPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFV 264
Query: 183 GCSLVDMYAKCAVDGSLVDSR-RVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDM 241
SL+DMY+K G VDS RVF+ N+VSW +++AG+V + EA+ +F M
Sbjct: 265 CNSLIDMYSK----GFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQ-RYDEALEMFHLM 319
Query: 242 LQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRL 301
+Q V + T S+L+ C + +H I+ G + +SLI+ Y +
Sbjct: 320 VQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLV 379
Query: 302 ECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN---HETEHTTGIGACSFTYACLLS 358
+ A D + K +VSC T++ + SDE ++ H + I S AC +S
Sbjct: 380 DDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNACSVS 439
Query: 359 GAACIGTIGKGEQIHALVVKSGFETN-LSINNALISMYSKCGNKEAALQVFNDMGDRNVI 417
+ + H + ++ N +S+ +++ Y+KCG E A + F+ + ++N+I
Sbjct: 440 A-----DLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNII 494
Query: 418 TWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSM 477
+WT IIS +A +G KAL LF EM + G PN VTY+A LSAC+H GL+ +G F SM
Sbjct: 495 SWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSM 554
Query: 478 RHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLD--ADAMVWRSLLGSCRVH-GN 534
P ++HY+C+VD+L R+G + A+E I ++P D A A W ++L CR
Sbjct: 555 VE-EDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKK 613
Query: 535 TELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIE 594
+ +LE EP + Y+L S+ +A E+ W DVA +R+ +K++K+ AGYS +
Sbjct: 614 LIITSEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVR 673
Query: 595 VENQVHKFHVGDTSHPQAQKIYDELDEL 622
N +F GD ++ D + L
Sbjct: 674 EGNLAKRFLAGDKLSQSDSELNDVVQSL 701
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 131/476 (27%), Positives = 238/476 (50%), Gaps = 21/476 (4%)
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
VF V K S + G + D ++K CGD+ S R F+ M R+ V+WN+++
Sbjct: 47 VFPIVFKACAKLSWLFQGNSIADFYMK-CGDLCSGLREFDCMNSRDSVSWNVIVFGLLDY 105
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVG 183
G+ E+ + F ++ + G+ P+ TL + AC L G+++H +VIRSG V
Sbjct: 106 GFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSLWF--DGEKIHGYVIRSGFCGISSVQ 163
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDML- 242
S++ MYA D + +R++F+ M E +V+SW+ +I YV+ S + ++LF +M+
Sbjct: 164 NSILCMYA----DSDSLSARKLFDEMSERDVISWSVVIRSYVQ-SKEPVVGLKLFKEMVH 218
Query: 243 QGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNC-VANSLINMYARSGRL 301
+ P+ T +SVLKAC + D G +H +I+ G + V NSLI+MY++ +
Sbjct: 219 EAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDV 278
Query: 302 ECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEH---TTGIGACSFTYACLLS 358
+ A + FD +++VS +I+ V + DE L E H + T LL
Sbjct: 279 DSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEAL--EMFHLMVQEAVEVDEVTVVSLLR 336
Query: 359 GAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVIT 418
+ IH ++++ G+E+N ++LI Y+ C + A V + M ++V++
Sbjct: 337 VCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVS 396
Query: 419 WTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACS-HVGLIDEGWKHFNSM 477
+++ISG A G + +A+ +F M +T PN +T I++L+ACS L W H ++
Sbjct: 397 CSTMISGLAHAGRSDEAISIFCHMRDT---PNAITVISLLNACSVSADLRTSKWAHGIAI 453
Query: 478 RHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHG 533
R + + +VD + G + A + + + + + W ++ + ++G
Sbjct: 454 RRSLA-INDISVGTSIVDAYAKCGAIEMARRTFDQIT-EKNIISWTVIISAYAING 507
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 299 bits (766), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 194/674 (28%), Positives = 330/674 (48%), Gaps = 83/674 (12%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
+RD+VSW +M+S E +ALV + M+ GF P+ + + L ACS L G
Sbjct: 100 ERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMR 159
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDI-ESAHRVFEKMQERNVVTWNLMMTRFAQ 122
G +KTG D ++ VG L+ M+ K CG I + RVFE + + N V++ ++ A+
Sbjct: 160 CHGVAVKTG-LDKNIFVGNALLSMYAK-CGFIVDYGVRVFESLSQPNEVSYTAVIGGLAR 217
Query: 123 MGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACA---------ELELLSVGKQLHSWVIR 173
+++ +F M G D L++ L+ A E+ +GKQ+H +R
Sbjct: 218 ENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALR 277
Query: 174 SGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGY--------- 224
G DL + SL+++YAK + + + +F MPE NVVSW +I G+
Sbjct: 278 LGFGGDLHLNNSLLEIYAK---NKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKS 334
Query: 225 ---------------------VRG----SGQEQEAMRLFCDMLQGNVA------------ 247
V G SG + R+F + Q +V+
Sbjct: 335 VEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNY 394
Query: 248 -------------------PNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVA 288
P+ T S +L +CA L G+Q+H I+ +S + +
Sbjct: 395 EHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIV 454
Query: 289 NSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRD--LNSDETLNHETEHTTGI 346
+ LI +Y+ ++E + FD + ++C + R L++ + H T +
Sbjct: 455 SGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAV 514
Query: 347 GACSFT-YACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAAL 405
+ T +A +LS + + ++ G Q H LVVKSG+ ++ + AL MY KCG ++A
Sbjct: 515 LCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSAR 574
Query: 406 QVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVG 465
Q F+ + +N + W +I G+ +G +A+ L+ +M+ +G KP+ +T+++VL+ACSH G
Sbjct: 575 QFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSG 634
Query: 466 LIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSL 525
L++ G + +SM+ HG+ P ++HY C+VD LGR+G L +A + + P + +++W L
Sbjct: 635 LVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEIL 694
Query: 526 LGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKII 585
L SCRVHG+ L A+ ++ +P A Y+LLSN Y++ +W D AA++ M + ++
Sbjct: 695 LSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVH 754
Query: 586 KEAGYSWIEVENQV 599
K G SW N +
Sbjct: 755 KTPGQSWTTYGNDL 768
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 203/406 (50%), Gaps = 55/406 (13%)
Query: 93 GDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSAL 152
GD+ A VF+ M ER+VV+WN M++ + G+ E ++ ++ RM+ G+ P RFTL S L
Sbjct: 86 GDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVL 145
Query: 153 TACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVD-SRRVFNSMPE 211
+AC+++ G + H +++GL ++ VG +L+ MYAKC G +VD RVF S+ +
Sbjct: 146 SACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKC---GFIVDYGVRVFESLSQ 202
Query: 212 HNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVL------KACANLPD 265
N VS+TA+I G R + EA+++F M + V + S++L + C +L +
Sbjct: 203 PNEVSYTAVIGGLAR-ENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSE 261
Query: 266 -FG--FGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETI 322
+G G+Q+H ++LG + NSL+ +YA++ + A F + E ++VS +
Sbjct: 262 IYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIM 321
Query: 323 VDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFE 382
+ ++ SD+++ T + SGF+
Sbjct: 322 IVGFGQEYRSDKSVEFLTR----------------------------------MRDSGFQ 347
Query: 383 TNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEM 442
N +++ + G+ E ++F+ + +V W +++SG++ + + +A+ F +M
Sbjct: 348 PNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQM 407
Query: 443 LETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVE 488
+KP+ T +LS+C+ + ++ G + HGVV R E
Sbjct: 408 QFQNLKPDKTTLSVILSSCARLRFLEGG-------KQIHGVVIRTE 446
Score = 147 bits (370), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 116/428 (27%), Positives = 199/428 (46%), Gaps = 48/428 (11%)
Query: 164 GKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVD--------------------------- 196
GK +H +++R G+ D + L+D+Y +C
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 197 -GSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSS 255
G L ++ VF+ MPE +VVSW +I+ VR G E++A+ ++ M+ P+ FT +S
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVR-KGFEEKALVVYKRMVCDGFLPSRFTLAS 143
Query: 256 VLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRL-ECARKCFDLLFEK 314
VL AC+ + D FG + H +K GL V N+L++MYA+ G + + + F+ L +
Sbjct: 144 VLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQP 203
Query: 315 SLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLS------GAACIGTIG 367
+ VS ++ + R+ E + G+ S + +LS G + I
Sbjct: 204 NEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIY 263
Query: 368 K---GEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIIS 424
G+QIH L ++ GF +L +NN+L+ +Y+K + A +F +M + NV++W +I
Sbjct: 264 GNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIV 323
Query: 425 GFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVV 484
GF + + K++E M ++G +PN+VT I+VL AC G ++ G + F+S+
Sbjct: 324 GFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQ----- 378
Query: 485 PRVEHYACMVDVLGRSGLLSEAIEFINSMP---LDADAMVWRSLLGSCRVHGNTELGEHA 541
P V + M+ EAI M L D +L SC E G+
Sbjct: 379 PSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQI 438
Query: 542 AKMILERE 549
+++ E
Sbjct: 439 HGVVIRTE 446
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 297 bits (761), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 175/530 (33%), Positives = 291/530 (54%), Gaps = 15/530 (2%)
Query: 74 FDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQ--ERNVVTWNLMMTRFAQMGY--PEDS 129
F+ V +G L + +++ ++ A F ++ +RN +WN +++ +++ D
Sbjct: 35 FEDEVVLGSSLTNAYIQS-NRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDV 93
Query: 130 IDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDM 189
+ L+ RM D F L A+ AC L LL G +H +++GL D V SLV+M
Sbjct: 94 LLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEM 153
Query: 190 YAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPN 249
YA+ G++ +++VF+ +P N V W L+ GY++ S ++ E RLFC M +A +
Sbjct: 154 YAQL---GTMESAQKVFDEIPVRNSVLWGVLMKGYLKYS-KDPEVFRLFCLMRDTGLALD 209
Query: 250 GFTFSSVLKACANLPDFGFGEQLHSQTIKLG-LSAVNCVANSLINMYARSGRLECARKCF 308
T ++KAC N+ G+ +H +I+ + + + S+I+MY + L+ ARK F
Sbjct: 210 ALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLF 269
Query: 309 DLLFEKSLVSCETIVDVIV---RDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGT 365
+ ++++V T++ R + + + + C T A +L + +G+
Sbjct: 270 ETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQC--TLAAILVSCSSLGS 327
Query: 366 IGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISG 425
+ G+ +H ++++G E + + I MY++CGN + A VF+ M +RNVI+W+S+I+
Sbjct: 328 LRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINA 387
Query: 426 FAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVP 485
F +G +AL+ F++M V PN VT++++LSACSH G + EGWK F SM +GVVP
Sbjct: 388 FGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVP 447
Query: 486 RVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMI 545
EHYACMVD+LGR+G + EA FI++MP+ A W +LL +CR+H +L A+ +
Sbjct: 448 EEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKL 507
Query: 546 LEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEV 595
L EP + Y+LLSN+YA W V +R+ M K K G S EV
Sbjct: 508 LSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATEV 557
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 164/315 (52%), Gaps = 6/315 (1%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
R+ V W +M + S + E F M + G + ++AC N VG+ V
Sbjct: 173 RNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCV 232
Query: 65 FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG 124
G ++ + D + +IDM+VK C +++A ++FE +RNVV W +++ FA+
Sbjct: 233 HGVSIRRSFIDQSDYLQASIIDMYVK-CRLLDNARKLFETSVDRNVVMWTTLISGFAKCE 291
Query: 125 YPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGC 184
++ DLF +ML P++ TL + L +C+ L L GK +H ++IR+G+ +D
Sbjct: 292 RAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFT 351
Query: 185 SLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQG 244
S +DMYA+C G++ +R VF+ MPE NV+SW+++I + +G +EA+ F M
Sbjct: 352 SFIDMYARC---GNIQMARTVFDMMPERNVISWSSMINAF-GINGLFEEALDCFHKMKSQ 407
Query: 245 NVAPNGFTFSSVLKACANLPDFGFG-EQLHSQTIKLGLSAVNCVANSLINMYARSGRLEC 303
NV PN TF S+L AC++ + G +Q S T G+ ++++ R+G +
Sbjct: 408 NVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGE 467
Query: 304 ARKCFDLLFEKSLVS 318
A+ D + K + S
Sbjct: 468 AKSFIDNMPVKPMAS 482
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 108/221 (48%), Gaps = 7/221 (3%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
R++V W +++S FA EA F ML PN+ A L +CS+ G+ V
Sbjct: 275 RNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSV 334
Query: 65 FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG 124
G +++ G V+ IDM+ + CG+I+ A VF+ M ERNV++W+ M+ F G
Sbjct: 335 HGYMIRNGIEMDAVNF-TSFIDMYAR-CGNIQMARTVFDMMPERNVISWSSMINAFGING 392
Query: 125 YPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVG-KQLHSWVIRSGLALDLCVG 183
E+++D F +M P+ T S L+AC+ + G KQ S G+ +
Sbjct: 393 LFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHY 452
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVS-WTALIAG 223
+VD+ + G + +++ ++MP + S W AL++
Sbjct: 453 ACMVDLLGRA---GEIGEAKSFIDNMPVKPMASAWGALLSA 490
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 129/271 (47%), Gaps = 24/271 (8%)
Query: 270 EQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLL--FEKSLVSCETIVDVIV 327
+Q+H++ I G + +SL N Y +S RL+ A F+ + ++++ S TI+
Sbjct: 24 QQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYS 83
Query: 328 RDLN---SDETL--NHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFE 382
+ SD L N H G+ + + +A + +G + G IH L +K+G +
Sbjct: 84 KSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFA--IKACVGLGLLENGILIHGLAMKNGLD 141
Query: 383 TNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEM 442
+ + +L+ MY++ G E+A +VF+++ RN + W ++ G+ K+ + LF M
Sbjct: 142 KDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLM 201
Query: 443 LETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHY-------ACMVD 495
+TG+ + +T I ++ AC +V G + HGV R A ++D
Sbjct: 202 RDTGLALDALTLICLVKACGNVFAGKVG-------KCVHGVSIRRSFIDQSDYLQASIID 254
Query: 496 VLGRSGLLSEAIEFINSMPLDADAMVWRSLL 526
+ + LL A + + +D + ++W +L+
Sbjct: 255 MYVKCRLLDNARKLFET-SVDRNVVMWTTLI 284
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 296 bits (758), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 180/529 (34%), Positives = 273/529 (51%), Gaps = 53/529 (10%)
Query: 93 GDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTP-DRFTLTSA 151
G I A +F++M ERNV+TW M+ + + G+ ED LF RM G + TL
Sbjct: 222 GRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVM 281
Query: 152 LTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPE 211
AC + G Q+H V R L DL +G SL+ MY+K G + +++ VF M
Sbjct: 282 FKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKL---GYMGEAKAVFGVMKN 338
Query: 212 HNVVSWTALIAGYVRGSGQEQEAMRLF-----CDMLQGNVAPNGFTFSSVLKACANLPDF 266
+ VSW +LI G V+ Q EA LF DM+ GF+ + C L F
Sbjct: 339 KDSVSWNSLITGLVQ-RKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVEL--F 395
Query: 267 GFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVI 326
G + N ++I+ + +G E A F + +K + C
Sbjct: 396 GMMPEKD-----------NITWTAMISAFVSNGYYEEALCWFHKMLQKEV--CPN----- 437
Query: 327 VRDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLS 386
S+T++ +LS A + + +G QIH VVK +LS
Sbjct: 438 -----------------------SYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLS 474
Query: 387 INNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETG 446
+ N+L+SMY KCGN A ++F+ + + N++++ ++ISG++ +G+ KAL+LF + +G
Sbjct: 475 VQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSG 534
Query: 447 VKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEA 506
+PN VT++A+LSAC HVG +D GWK+F SM+ + + P +HYACMVD+LGRSGLL +A
Sbjct: 535 KEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDA 594
Query: 507 IEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATE 566
I++MP + VW SLL + + H +L E AAK ++E EP Y++LS LY+
Sbjct: 595 SNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSII 654
Query: 567 ERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKI 615
+ D I K K+I K+ G SWI ++ +VH F GD S ++I
Sbjct: 655 GKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEI 703
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 124/470 (26%), Positives = 207/470 (44%), Gaps = 91/470 (19%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR 62
S R +VSW +M+S +A N +A F +M
Sbjct: 77 SNRSIVSWIAMISAYAENGKMSKAWQVFDEM----------------------------- 107
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
V T +++ +I +K D+ A+ +F + E+N V++ M+T F +
Sbjct: 108 ----PVRVTTSYNA-------MITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVR 156
Query: 123 MGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCV 182
G +++ L+ TP +F + A L GK + + G+A+ V
Sbjct: 157 AGRFDEAEFLY------AETPVKFRDSVASNVLLS-GYLRAGKWNEAVRVFQGMAVKEVV 209
Query: 183 GC-SLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDM 241
C S+V Y K G +VD+R +F+ M E NV++WTA+I GY + +G ++ LF M
Sbjct: 210 SCSSMVHGYCKM---GRIVDARSLFDRMTERNVITWTAMIDGYFK-AGFFEDGFGLFLRM 265
Query: 242 LQ-GNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGR 300
Q G+V N T + + KAC + + G Q+H ++ L + NSL++MY++ G
Sbjct: 266 RQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGY 325
Query: 301 LECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGA 360
+ A+ F ++ K VS +++ +V+ E E G S+T
Sbjct: 326 MGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAY-ELFEKMPGKDMVSWT-------D 377
Query: 361 ACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWT 420
G GKGE SKC +++F M +++ ITWT
Sbjct: 378 MIKGFSGKGE------------------------ISKC------VELFGMMPEKDNITWT 407
Query: 421 SIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEG 470
++IS F +GY +AL F++ML+ V PN T+ +VLSA + + + EG
Sbjct: 408 AMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEG 457
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 147/322 (45%), Gaps = 46/322 (14%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHG-FYPNEYCFTAALRACSNSLYFSVG 61
++R++++W +M+ + + FL M + G N +AC + + + G
Sbjct: 235 TERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREG 294
Query: 62 RVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFA 121
+ G V + + + +G L+ M+ K G + A VF M+ ++ V+WN ++T
Sbjct: 295 SQIHGLVSRMP-LEFDLFLGNSLMSMYSK-LGYMGEAKAVFGVMKNKDSVSWNSLITGLV 352
Query: 122 QMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLC 181
Q ++ +LF +M GK + SW D+
Sbjct: 353 QRKQISEAYELFEKM--------------------------PGKDMVSWT-------DMI 379
Query: 182 VGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDM 241
G S +KC +F MPE + ++WTA+I+ +V +G +EA+ F M
Sbjct: 380 KGFSGKGEISKCV---------ELFGMMPEKDNITWTAMISAFV-SNGYYEEALCWFHKM 429
Query: 242 LQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRL 301
LQ V PN +TFSSVL A A+L D G Q+H + +K+ + V NSL++MY + G
Sbjct: 430 LQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNT 489
Query: 302 ECARKCFDLLFEKSLVSCETIV 323
A K F + E ++VS T++
Sbjct: 490 NDAYKIFSCISEPNIVSYNTMI 511
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 117/219 (53%), Gaps = 13/219 (5%)
Query: 91 GCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTS 150
G G+I +F M E++ +TW M++ F GY E+++ F +ML P+ +T +S
Sbjct: 384 GKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSS 443
Query: 151 ALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMP 210
L+A A L L G Q+H V++ + DL V SLV MY KC G+ D+ ++F+ +
Sbjct: 444 VLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKC---GNTNDAYKIFSCIS 500
Query: 211 EHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLP--DFG- 267
E N+VS+ +I+GY +G ++A++LF + PNG TF ++L AC ++ D G
Sbjct: 501 EPNIVSYNTMISGYSY-NGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGW 559
Query: 268 --FGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECA 304
F S I+ G C ++++ RSG L+ A
Sbjct: 560 KYFKSMKSSYNIEPGPDHYAC----MVDLLGRSGLLDDA 594
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 117/230 (50%), Gaps = 17/230 (7%)
Query: 1 MGSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSV 60
M ++D ++W +M+S F +N EAL F ML+ PN Y F++ L A ++
Sbjct: 397 MMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIE 456
Query: 61 GRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRF 120
G + G V+K + +SV L+ M+ K CG+ A+++F + E N+V++N M++ +
Sbjct: 457 GLQIHGRVVKMNIVND-LSVQNSLVSMYCK-CGNTNDAYKIFSCISEPNIVSYNTMISGY 514
Query: 121 AQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQL-----HSWVIRSG 175
+ G+ + ++ LF + SG P+ T + L+AC + + +G + S+ I G
Sbjct: 515 SYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPG 574
Query: 176 LALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMP--EHNVVSWTALIAG 223
C +VD+ + G L D+ + ++MP H+ V W +L++
Sbjct: 575 PDHYAC----MVDLLGR---SGLLDDASNLISTMPCKPHSGV-WGSLLSA 616
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 296 bits (758), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 165/487 (33%), Positives = 268/487 (55%), Gaps = 11/487 (2%)
Query: 112 TWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWV 171
++N +++ +A P +I + + +G++PD FT AC + + GKQ+H V
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIV 132
Query: 172 IRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQE 231
+ G D+ V SLV Y C G ++ +VF MP +VVSWT +I G+ R +G
Sbjct: 133 TKMGFYDDIYVQNSLVHFYGVC---GESRNACKVFGEMPVRDVVSWTGIITGFTR-TGLY 188
Query: 232 QEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSL 291
+EA+ F M +V PN T+ VL + + G+ +H +K N+L
Sbjct: 189 KEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNAL 245
Query: 292 INMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN--HETEHTTGIGAC 349
I+MY + +L A + F L +K VS +++ +V S E ++ + ++GI
Sbjct: 246 IDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPD 305
Query: 350 SFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFN 409
+LS A +G + G +H ++ +G + + I A++ MY+KCG E AL++FN
Sbjct: 306 GHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFN 365
Query: 410 DMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDE 469
+ +NV TW +++ G A HG+ ++L F EM++ G KPN VT++A L+AC H GL+DE
Sbjct: 366 GIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDE 425
Query: 470 GWKHFNSMR-HCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGS 528
G ++F+ M+ + + P++EHY CM+D+L R+GLL EA+E + +MP+ D + ++L +
Sbjct: 426 GRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSA 485
Query: 529 CRVHGN-TELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKE 587
C+ G EL + L+ E D Y+LLSN++A RW DVA IR+ MK K I K
Sbjct: 486 CKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKV 545
Query: 588 AGYSWIE 594
G S+IE
Sbjct: 546 PGSSYIE 552
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/468 (25%), Positives = 211/468 (45%), Gaps = 53/468 (11%)
Query: 9 SWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSV 68
S+ +++S +A + + + +GF P+ + F +AC G+ + G V
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIV 132
Query: 69 LKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPED 128
K G++D + V L+ F CG+ +A +VF +M R+VV+W ++T F + G ++
Sbjct: 133 TKMGFYDD-IYVQNSLVH-FYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKE 190
Query: 129 SIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVD 188
++D F +M P+ T L + + LS+GK +H +++ + L G +L+D
Sbjct: 191 ALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALID 247
Query: 189 MYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDM-LQGNVA 247
MY KC L D+ RVF + + + VSW ++I+G V + +EA+ LF M +
Sbjct: 248 MYVKCE---QLSDAMRVFGELEKKDKVSWNSMISGLVHCE-RSKEAIDLFSLMQTSSGIK 303
Query: 248 PNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKC 307
P+G +SVL ACA+L G +H + G+ + ++++MYA+ G +E A +
Sbjct: 304 PDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEI 363
Query: 308 FDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIG 367
F+ + K++ FT+ LL G A G
Sbjct: 364 FNGIRSKNV----------------------------------FTWNALLGGLAIHGHGL 389
Query: 368 KGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSI----- 422
+ + +VK GF+ NL A ++ G + + F+ M R + +
Sbjct: 390 ESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGC 449
Query: 423 -ISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDE 469
I + G +ALEL M VKP+ A+LSAC + G + E
Sbjct: 450 MIDLLCRAGLLDEALELVKAM---PVKPDVRICGAILSACKNRGTLME 494
Score = 139 bits (350), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 137/257 (53%), Gaps = 10/257 (3%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
RD+VSW +++ F + EAL TF M PN + L + S+G+ +
Sbjct: 170 RDVVSWTGIITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGI 226
Query: 65 FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG 124
G +LK S + G LIDM+VK C + A RVF ++++++ V+WN M++
Sbjct: 227 HGLILKRASLIS-LETGNALIDMYVK-CEQLSDAMRVFGELEKKDKVSWNSMISGLVHCE 284
Query: 125 YPEDSIDLFFRMLL-SGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVG 183
+++IDLF M SG PD LTS L+ACA L + G+ +H +++ +G+ D +G
Sbjct: 285 RSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIG 344
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQ 243
++VDMYAKC G + + +FN + NV +W AL+ G G E++R F +M++
Sbjct: 345 TAIVDMYAKC---GYIETALEIFNGIRSKNVFTWNALLGGLAI-HGHGLESLRYFEEMVK 400
Query: 244 GNVAPNGFTFSSVLKAC 260
PN TF + L AC
Sbjct: 401 LGFKPNLVTFLAALNAC 417
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 87/165 (52%), Gaps = 5/165 (3%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTF-LDMLEHGFYPNEYCFTAALRACSNSLYFSVGR 62
K+D VSW SM+S + EA+ F L G P+ + T+ L AC++ GR
Sbjct: 267 KKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGR 326
Query: 63 VVFGSVLKTGY-FDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFA 121
V +L G +D+H+ G ++DM+ K CG IE+A +F ++ +NV TWN ++ A
Sbjct: 327 WVHEYILTAGIKWDTHI--GTAIVDMYAK-CGYIETALEIFNGIRSKNVFTWNALLGGLA 383
Query: 122 QMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQ 166
G+ +S+ F M+ G+ P+ T +AL AC L+ G++
Sbjct: 384 IHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRR 428
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 295 bits (755), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 178/503 (35%), Positives = 261/503 (51%), Gaps = 39/503 (7%)
Query: 161 LSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTAL 220
L KQ H ++I +GL D ++ C+ G L + VF P N +
Sbjct: 28 LKTLKQSHCYMIITGLNRD---NLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTM 84
Query: 221 IAGY--VRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIK 278
I + A+ ++ + P+ FTF VLK + D FG Q+H Q +
Sbjct: 85 IRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVV 144
Query: 279 LGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSL---------------------- 316
G + V LI MY G L ARK FD + K +
Sbjct: 145 FGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSL 204
Query: 317 -----------VSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGAACIG 364
VS ++ + + E + + + T +LS A +G
Sbjct: 205 LEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLG 264
Query: 365 TIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIIS 424
++ GE+I + V G +S+NNA+I MY+K GN AL VF + +RNV+TWT+II+
Sbjct: 265 SLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIA 324
Query: 425 GFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVV 484
G A HG+ +AL +F M++ GV+PNDVT+IA+LSACSHVG +D G + FNSMR +G+
Sbjct: 325 GLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIH 384
Query: 485 PRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKM 544
P +EHY CM+D+LGR+G L EA E I SMP A+A +W SLL + VH + ELGE A
Sbjct: 385 PNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSE 444
Query: 545 ILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHV 604
+++ EP++ Y+LL+NLY+ RW + +R MK + K AG S IEVEN+V+KF
Sbjct: 445 LIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFIS 504
Query: 605 GDTSHPQAQKIYDELDELASKIK 627
GD +HPQ ++I++ L E+ +I+
Sbjct: 505 GDLTHPQVERIHEILQEMDLQIQ 527
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 147/299 (49%), Gaps = 40/299 (13%)
Query: 40 PNEYCFTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAH 99
P+ + F L+ GR + G V+ G FDS V V LI M+ CG + A
Sbjct: 114 PDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFG-FDSSVHVVTGLIQMYFS-CGGLGDAR 171
Query: 100 RVFEKM---------------------------------QERNVVTWNLMMTRFAQMGYP 126
++F++M RN V+W +++ +A+ G
Sbjct: 172 KMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRA 231
Query: 127 EDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSL 186
++I++F RML+ PD TL + L+ACA+L L +G+++ S+V G+ + + ++
Sbjct: 232 SEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAV 291
Query: 187 VDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNV 246
+DMYAK G++ + VF + E NVV+WT +IAG + G EA+ +F M++ V
Sbjct: 292 IDMYAK---SGNITKALDVFECVNERNVVTWTTIIAG-LATHGHGAEALAMFNRMVKAGV 347
Query: 247 APNGFTFSSVLKACANLPDFGFGEQL-HSQTIKLGLSAVNCVANSLINMYARSGRLECA 304
PN TF ++L AC+++ G++L +S K G+ +I++ R+G+L A
Sbjct: 348 RPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREA 406
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 188/435 (43%), Gaps = 51/435 (11%)
Query: 88 FVKGC---GDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPED---SIDLFFRMLLSGY 141
F++ C G + A+ VF N N M+ + + P +I ++ ++
Sbjct: 53 FIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCA 112
Query: 142 TPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVD 201
PD FT L + + G+Q+H V+ G + V L+ MY C G L D
Sbjct: 113 KPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSC---GGLGD 169
Query: 202 SRRVFNSMPEHNVVSWTALIAGY-------------------VRG-------------SG 229
+R++F+ M +V W AL+AGY VR SG
Sbjct: 170 ARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSG 229
Query: 230 QEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVAN 289
+ EA+ +F ML NV P+ T +VL ACA+L GE++ S G++ + N
Sbjct: 230 RASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNN 289
Query: 290 SLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHT-TGIGA 348
++I+MYA+SG + A F+ + E+++V+ TI+ + + E L G+
Sbjct: 290 AVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRP 349
Query: 349 CSFTYACLLSGAACIGTIGKGEQI-HALVVKSGFETNLSINNALISMYSKCGNKEAALQV 407
T+ +LS + +G + G+++ +++ K G N+ +I + + G A +V
Sbjct: 350 NDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEV 409
Query: 408 FNDMGDR-NVITWTSIISGFAKHGYATKALELFYEMLETGVK--PNDV-TYIAVLSACSH 463
M + N W S+++ H LEL L +K PN+ Y+ + + S+
Sbjct: 410 IKSMPFKANAAIWGSLLAASNVH----HDLELGERALSELIKLEPNNSGNYMLLANLYSN 465
Query: 464 VGLIDEGWKHFNSMR 478
+G DE N M+
Sbjct: 466 LGRWDESRMMRNMMK 480
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 115/223 (51%), Gaps = 11/223 (4%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
R+ VSW ++S +A + EA+ F ML P+E A L AC++ +G +
Sbjct: 213 RNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERI 272
Query: 65 FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG 124
V G + VS+ +IDM+ K G+I A VFE + ERNVVTW ++ A G
Sbjct: 273 CSYVDHRG-MNRAVSLNNAVIDMYAKS-GNITKALDVFECVNERNVVTWTTIIAGLATHG 330
Query: 125 YPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCV-- 182
+ +++ +F RM+ +G P+ T + L+AC+ + + +GK+L + +RS + +
Sbjct: 331 HGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFN-SMRSKYGIHPNIEH 389
Query: 183 -GCSLVDMYAKCAVDGSLVDSRRVFNSMP-EHNVVSWTALIAG 223
GC ++D+ + G L ++ V SMP + N W +L+A
Sbjct: 390 YGC-MIDLLGRA---GKLREADEVIKSMPFKANAAIWGSLLAA 428
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 179/577 (31%), Positives = 296/577 (51%), Gaps = 46/577 (7%)
Query: 98 AHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLS------GYTPDRFTLT-- 149
A VF+++ RN ++N ++ + D+ LF + S PD +++
Sbjct: 76 ALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCV 135
Query: 150 -SALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNS 208
AL+ C + L S+ +Q+H +VIR G D+ VG ++ Y KC ++ +R+VF+
Sbjct: 136 LKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKC---DNIESARKVFDE 192
Query: 209 MPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQ-GNVAPNGFTFSSVLKACANLPDFG 267
M E +VVSW ++I+GY + SG ++ +++ ML + PNG T SV +AC D
Sbjct: 193 MSERDVVSWNSMISGYSQ-SGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLI 251
Query: 268 FGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDV-- 325
FG ++H + I+ + + N++I YA+ G L+ AR FD + EK V+ I+
Sbjct: 252 FGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYM 311
Query: 326 -----------------------------IVRDLNSDETLNHETEHTT-GIGACSFTYAC 355
++++ + +E +N E G + T +
Sbjct: 312 AHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSS 371
Query: 356 LLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRN 415
LL + G++IHA +++G + N+ + ++I Y+K G A +VF++ DR+
Sbjct: 372 LLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRS 431
Query: 416 VITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFN 475
+I WT+II+ +A HG + A LF +M G KP+DVT AVLSA +H G D F+
Sbjct: 432 LIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFD 491
Query: 476 SMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNT 535
SM + + P VEHYACMV VL R+G LS+A+EFI+ MP+D A VW +LL V G+
Sbjct: 492 SMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDL 551
Query: 536 ELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEV 595
E+ A + E EP + Y +++NLY RW + +R MK+ + K G SWIE
Sbjct: 552 EIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIET 611
Query: 596 ENQVHKFHVGDTSHPQAQKIYDELDELASKIKKLGYV 632
E + F D+S +++++Y+ ++ L + Y+
Sbjct: 612 EKGLRSFIAKDSSCERSKEMYEIIEGLVESMSDKEYI 648
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 125/465 (26%), Positives = 218/465 (46%), Gaps = 50/465 (10%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEY---------CFTAALRACSNS 55
R+ S+ +++ + + M +A FL + Y ++ C AL C +
Sbjct: 86 RNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDF 145
Query: 56 LYFSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNL 115
S+ R V G V++ G FDS V VG +I + K C +IESA +VF++M ER+VV+WN
Sbjct: 146 WLGSLARQVHGFVIRGG-FDSDVFVGNGMITYYTK-CDNIESARKVFDEMSERDVVSWNS 203
Query: 116 MMTRFAQMGYPEDSIDLFFRMLL-SGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRS 174
M++ ++Q G ED ++ ML S + P+ T+ S AC + L G ++H +I +
Sbjct: 204 MISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIEN 263
Query: 175 GLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEA 234
+ +DL + +++ YAKC GSL +R +F+ M E + V++ A+I+GY+ G +EA
Sbjct: 264 HIQMDLSLCNAVIGFYAKC---GSLDYARALFDEMSEKDSVTYGAIISGYM-AHGLVKEA 319
Query: 235 MRLFCDM---------------LQGN----------------VAPNGFTFSSVLKACANL 263
M LF +M +Q N PN T SS+L +
Sbjct: 320 MALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYS 379
Query: 264 PDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIV 323
+ G+++H+ I+ G V S+I+ YA+ G L A++ FD ++SL++ I+
Sbjct: 380 SNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAII 439
Query: 324 DVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQI-HALVVKSGF 381
+SD + + G T +LS A G + I +++ K
Sbjct: 440 TAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDI 499
Query: 382 ETNLSINNALISMYSKCGNKEAALQVFNDMG-DRNVITWTSIISG 425
E + ++S+ S+ G A++ + M D W ++++G
Sbjct: 500 EPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNG 544
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 155/342 (45%), Gaps = 53/342 (15%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLE-HGFYPNEYCFTAALRACSNSLYFSVG 61
S+RD+VSW SM+S ++ + + + ML F PN + +AC S
Sbjct: 194 SERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQS-----S 248
Query: 62 RVVFGSVLKTGYFDSHVSVG---CELIDMFVKGCGDIESAHRVFEKMQERNVVT------ 112
++FG + ++H+ + C + F CG ++ A +F++M E++ VT
Sbjct: 249 DLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIIS 308
Query: 113 -------------------------WNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFT 147
WN M++ Q + E+ I+ F M+ G P+ T
Sbjct: 309 GYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVT 368
Query: 148 LTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFN 207
L+S L + L GK++H++ IR+G ++ V S++D YAK G L+ ++RVF+
Sbjct: 369 LSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKL---GFLLGAQRVFD 425
Query: 208 SMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFG 267
+ + ++++WTA+I Y G A LF M P+ T ++VL A A+ D
Sbjct: 426 NCKDRSLIAWTAIITAYAV-HGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSD 484
Query: 268 -----FGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECA 304
F L I+ G+ C ++++ +R+G+L A
Sbjct: 485 MAQHIFDSMLTKYDIEPGVEHYAC----MVSVLSRAGKLSDA 522
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 93/420 (22%), Positives = 181/420 (43%), Gaps = 62/420 (14%)
Query: 166 QLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYV 225
QLH+ ++ + D + L+ Y + + VF+ + N S+ AL+ Y
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISFYTR---QDRFRQALHVFDEITVRNAFSYNALLIAY- 98
Query: 226 RGSGQEQ--EAMRLFCDMLQGN------VAPNGFTFSSVLKACANLPDFGFG---EQLHS 274
+ +E +A LF + + P+ + S VLKA + DF G Q+H
Sbjct: 99 --TSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHG 156
Query: 275 QTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDE 334
I+ G + V N +I Y + +E ARK FD + E+ +VS +++ + + ++
Sbjct: 157 FVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFED 216
Query: 335 -------TLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSI 387
L G+ S AC S G ++H ++++ + +LS+
Sbjct: 217 CKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGL-----EVHKKMIENHIQMDLSL 271
Query: 388 NNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALEL--------- 438
NA+I Y+KCG+ + A +F++M +++ +T+ +IISG+ HG +A+ L
Sbjct: 272 CNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGL 331
Query: 439 ----------------------FYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNS 476
F EM+ G +PN VT ++L + ++ + +G K ++
Sbjct: 332 STWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNL-KGGKEIHA 390
Query: 477 MRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTE 536
+G + ++D + G L A ++ D + W +++ + VHG+++
Sbjct: 391 FAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCK-DRSLIAWTAIITAYAVHGDSD 449
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 286 bits (733), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 181/549 (32%), Positives = 298/549 (54%), Gaps = 43/549 (7%)
Query: 105 MQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVG 164
+Q +++ +N M+ A + LF + G PD FTL L + L + G
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEG 65
Query: 165 KQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGY 224
+++H + +++GL D V SL+ MYA G + + +VF+ MP+ +VVSW LI+ Y
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASL---GKIEITHKVFDEMPQRDVVSWNGLISSY 122
Query: 225 VRGSGQEQEAMRLFCDMLQ-GNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSA 283
V G+G+ ++A+ +F M Q N+ + T S L AC+ L + GE+++ + +
Sbjct: 123 V-GNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMS 181
Query: 284 VNCVANSLINMYARSGRLECARKCFD---------------------------LLFEKS- 315
V + N+L++M+ + G L+ AR FD +LFE+S
Sbjct: 182 VR-IGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSP 240
Query: 316 ---LVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQ 371
+V +++ V+ DE L T GI +F LL+G A G + +G+
Sbjct: 241 VKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKW 300
Query: 372 IHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGY 431
IH + ++ + + AL+ MY+KCG E AL+VF ++ +R+ +WTS+I G A +G
Sbjct: 301 IHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGM 360
Query: 432 ATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYA 491
+ +AL+L+YEM GV+ + +T++AVL+AC+H G + EG K F+SM H V P+ EH +
Sbjct: 361 SGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCS 420
Query: 492 CMVDVLGRSGLLSEAIEFINSMPLDADAM---VWRSLLGSCRVHGNTELGEHAAKMILER 548
C++D+L R+GLL EA E I+ M ++D V+ SLL + R +GN ++ E A+ + +
Sbjct: 421 CLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKV 480
Query: 549 EPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDT- 607
E D + + LL+++YA+ RW DV +R+ MK I K G S IE++ H+F VGD
Sbjct: 481 EVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDL 540
Query: 608 -SHPQAQKI 615
SHP+ +I
Sbjct: 541 LSHPKMDEI 549
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 122/477 (25%), Positives = 224/477 (46%), Gaps = 48/477 (10%)
Query: 7 LVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFG 66
L+ + M+ A+ + L F ++ G YP+ + L++ G V G
Sbjct: 11 LLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHG 70
Query: 67 SVLKTGY-FDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGY 125
+K G FDS+VS L+ M+ G IE H+VF++M +R+VV+WN +++ + G
Sbjct: 71 YAVKAGLEFDSYVS--NSLMGMYAS-LGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGR 127
Query: 126 PEDSIDLFFRMLL-SGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGC 184
ED+I +F RM S D T+ S L+AC+ L+ L +G++++ +V+ + + + +G
Sbjct: 128 FEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVV-TEFEMSVRIGN 186
Query: 185 SLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQ------------ 232
+LVDM+ KC G L +R VF+SM + NV WT+++ GYV ++
Sbjct: 187 ALVDMFCKC---GCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKD 243
Query: 233 ------------------EAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHS 274
EA+ LF M + P+ F S+L CA G+ +H
Sbjct: 244 VVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHG 303
Query: 275 QTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDE 334
+ ++ V +L++MYA+ G +E A + F + E+ S +++ + + S
Sbjct: 304 YINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGR 363
Query: 335 TLN--HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQI-HALVVKSGFETNLSINNAL 391
L+ +E E+ G+ + T+ +L+ G + +G +I H++ + + + L
Sbjct: 364 ALDLYYEMEN-VGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCL 422
Query: 392 ISMYSKCGNKEAALQVFNDM-GDRN---VITWTSIISGFAKHGYATKALELFYEMLE 444
I + + G + A ++ + M G+ + V + S++S +G K E E LE
Sbjct: 423 IDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYG-NVKIAERVAEKLE 478
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 167/355 (47%), Gaps = 43/355 (12%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDM-LEHGFYPNEYCFTAALRACSNSLYFSVGR 62
+RD+VSW ++S + N +A+ F M E +E + L ACS +G
Sbjct: 109 QRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGE 168
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNV------------ 110
++ V+ F+ V +G L+DMF K CG ++ A VF+ M+++NV
Sbjct: 169 RIYRFVVTE--FEMSVRIGNALVDMFCK-CGCLDKARAVFDSMRDKNVKCWTSMVFGYVS 225
Query: 111 -------------------VTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSA 151
V W MM + Q +++++LF M +G PD F L S
Sbjct: 226 TGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSL 285
Query: 152 LTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPE 211
LT CA+ L GK +H ++ + + +D VG +LVDMYAKC G + + VF + E
Sbjct: 286 LTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKC---GCIETALEVFYEIKE 342
Query: 212 HNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQ 271
+ SWT+LI G +G A+ L+ +M V + TF +VL AC + G +
Sbjct: 343 RDTASWTSLIYGLAM-NGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRK 401
Query: 272 L-HSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDV 325
+ HS T + + + + LI++ R+G L+ A + D + + S ET+V V
Sbjct: 402 IFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGE---SDETLVPV 453
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 286 bits (732), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 180/594 (30%), Positives = 313/594 (52%), Gaps = 21/594 (3%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
++D SW +MM+ +A+N E L F M + N+ +AL+A + G
Sbjct: 262 RKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIA 321
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
+ ++ G VSV L+ M+ K CG++E A ++F +++R+VV+W+ M+ + Q
Sbjct: 322 IHDYAVQQGLI-GDVSVATSLMSMYSK-CGELEIAEQLFINIEDRDVVSWSAMIASYEQA 379
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVG 183
G +++I LF M+ P+ TLTS L CA + +GK +H + I++ + +L
Sbjct: 380 GQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETA 439
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQ 243
+++ MYAKC G + + F +P + V++ AL GY + G +A ++ +M
Sbjct: 440 TAVISMYAKC---GRFSPALKAFERLPIKDAVAFNALAQGYTQ-IGDANKAFDVYKNMKL 495
Query: 244 GNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLEC 303
V P+ T +L+ CA D+ G ++ Q IK G + VA++LINM+ + L
Sbjct: 496 HGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAA 555
Query: 304 ARKCFDLL-FEKSLVSCETIVDVIVRDLNSDETL-NHETEHTTGIGACSFTYACLLSGAA 361
A FD FEKS VS +++ + ++E + + T+ ++ AA
Sbjct: 556 AIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAA 615
Query: 362 CIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTS 421
+ + G +H+ +++ GF + + N+L+ MY+KCG E++ + F ++ ++ +++W +
Sbjct: 616 ELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNT 675
Query: 422 IISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCH 481
++S +A HG A+ A+ LF M E +KP+ V++++VLSAC H GL++EG + F M H
Sbjct: 676 MLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERH 735
Query: 482 GVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHA 541
+ VEHYACMVD+LG++GL EA+E + M + VW +LL S R+H N L A
Sbjct: 736 KIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAA 795
Query: 542 AKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEV 595
+++ EP +P+ Y+ + R +V + +I K SWIEV
Sbjct: 796 LCQLVKLEPLNPSH-------YSQDRRLGEVNNV------SRIKKVPACSWIEV 836
Score = 205 bits (521), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 156/568 (27%), Positives = 284/568 (50%), Gaps = 25/568 (4%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
+D+V+W +M+S A N AL+ F DM + + A S V R +
Sbjct: 164 KDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCL 223
Query: 65 FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG 124
G V+K G+ + S LIDM+ C D+ +A VFE++ ++ +W MM +A G
Sbjct: 224 HGLVIKKGFIFAFSS---GLIDMYCN-CADLYAAESVFEEVWRKDESSWGTMMAAYAHNG 279
Query: 125 YPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGC 184
+ E+ ++LF M ++ SAL A A + L G +H + ++ GL D+ V
Sbjct: 280 FFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVAT 339
Query: 185 SLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQG 244
SL+ MY+KC G L + ++F ++ + +VVSW+A+IA Y + +GQ EA+ LF DM++
Sbjct: 340 SLMSMYSKC---GELEIAEQLFINIEDRDVVSWSAMIASYEQ-AGQHDEAISLFRDMMRI 395
Query: 245 NVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECA 304
++ PN T +SVL+ CA + G+ +H IK + + A ++I+MYA+ GR A
Sbjct: 396 HIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPA 455
Query: 305 RKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGAACI 363
K F+ L K V+ + + ++++ + ++ G+ S T +L A
Sbjct: 456 LKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFC 515
Query: 364 GTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMG-DRNVITWTSI 422
+G ++ ++K GF++ + +ALI+M++KC AA+ +F+ G +++ ++W +
Sbjct: 516 SDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIM 575
Query: 423 ISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHG 482
++G+ HG A +A+ F +M +PN VT++ ++ A + + + G +S+ C G
Sbjct: 576 MNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQC-G 634
Query: 483 VVPRVEHYACMVDVLGRSGLLSEA----IEFINSMPLDADAMVWRSLLGSCRVHGNTELG 538
+ +VD+ + G++ + IE N + W ++L + HG L
Sbjct: 635 FCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVS-----WNTMLSAYAAHG---LA 686
Query: 539 EHAAKMILEREPHD--PATYILLSNLYA 564
A + L + ++ P + LS L A
Sbjct: 687 SCAVSLFLSMQENELKPDSVSFLSVLSA 714
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 151/538 (28%), Positives = 254/538 (47%), Gaps = 13/538 (2%)
Query: 3 SKRD--LVSWCSMMSCFANNSMEHEALVTFLDMLEH-GFYPNEYCFTAALRACSNSLYFS 59
S RD +V W SM+ + + EAL F M E G P++Y FT AL+AC+ S+ F
Sbjct: 58 SVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFK 117
Query: 60 VGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTR 119
G + + + G +S V +G L++M+ K D+ SA +VF+KM ++VVTWN M++
Sbjct: 118 KGLRIHDLIAEMG-LESDVYIGTALVEMYCKA-RDLVSARQVFDKMHVKDVVTWNTMVSG 175
Query: 120 FAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALD 179
AQ G ++ LF M D +L + + A ++LE V + LH VI+ G
Sbjct: 176 LAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFA 235
Query: 180 LCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFC 239
G L+DMY CA L + VF + + SW ++A Y +G +E + LF
Sbjct: 236 FSSG--LIDMYCNCA---DLYAAESVFEEVWRKDESSWGTMMAAYAH-NGFFEEVLELFD 289
Query: 240 DMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSG 299
M +V N +S L+A A + D G +H ++ GL VA SL++MY++ G
Sbjct: 290 LMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCG 349
Query: 300 RLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLS 358
LE A + F + ++ +VS ++ + DE ++ I + T +L
Sbjct: 350 ELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQ 409
Query: 359 GAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVIT 418
G A + G+ IH +K+ E+ L A+ISMY+KCG AL+ F + ++ +
Sbjct: 410 GCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVA 469
Query: 419 WTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMR 478
+ ++ G+ + G A KA +++ M GV P+ T + +L C+ G + +
Sbjct: 470 FNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQII 529
Query: 479 HCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTE 536
HG ++++ + L+ AI + + + W ++ +HG E
Sbjct: 530 K-HGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAE 586
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/445 (27%), Positives = 216/445 (48%), Gaps = 23/445 (5%)
Query: 101 VFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRML-LSGYTPDRFTLTSALTACAELE 159
+F+ +++ VV WN M+ + + G +++ F M G PD+++ T AL ACA
Sbjct: 55 IFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSM 114
Query: 160 LLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTA 219
G ++H + GL D+ +G +LV+MY K LV +R+VF+ M +VV+W
Sbjct: 115 DFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKAR---DLVSARQVFDKMHVKDVVTWNT 171
Query: 220 LIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKL 279
+++G + +G A+ LF DM V + + +++ A + L LH IK
Sbjct: 172 MVSGLAQ-NGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKK 230
Query: 280 GLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN-H 338
G + ++ LI+MY L A F+ ++ K S T++ + +E L
Sbjct: 231 GF--IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELF 288
Query: 339 ETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKC 398
+ + A L AA +G + KG IH V+ G ++S+ +L+SMYSKC
Sbjct: 289 DLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKC 348
Query: 399 GNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVL 458
G E A Q+F ++ DR+V++W+++I+ + + G +A+ LF +M+ +KPN VT +VL
Sbjct: 349 GELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVL 408
Query: 459 SACSHVGLIDEGWKHFNSMRHCHGVVPRVEH----YACMVDVLGRSGLLSEAIEFINSMP 514
C+ V HC+ + +E ++ + + G S A++ +P
Sbjct: 409 QGCAGVAA-----SRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLP 463
Query: 515 LDADAMVWRSLLGSCRVHGNTELGE 539
+ DA+ + +L G T++G+
Sbjct: 464 IK-DAVAFNAL-----AQGYTQIGD 482
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 175/354 (49%), Gaps = 20/354 (5%)
Query: 202 SRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDML-QGNVAPNGFTFSSVLKAC 260
SR +F+S+ + VV W ++I GY R +G +EA+ F M + + P+ ++F+ LKAC
Sbjct: 52 SRVIFDSVRDPGVVLWNSMIRGYTR-AGLHREALGFFGYMSEEKGIDPDKYSFTFALKAC 110
Query: 261 ANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCE 320
A DF G ++H ++GL + + +L+ MY ++ L AR+ FD + K +V+
Sbjct: 111 AGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWN 170
Query: 321 TIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQ---IHALVV 377
T+V + ++ S L H + L + + + K + +H LV+
Sbjct: 171 TMVSGLAQNGCSSAAL--LLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVI 228
Query: 378 KSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALE 437
K GF + ++ LI MY C + AA VF ++ ++ +W ++++ +A +G+ + LE
Sbjct: 229 KKGF--IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLE 286
Query: 438 LFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWK-HFNSMRHCHGVVPRVEHYACMVDV 496
LF M V+ N V + L A ++VG + +G H +++ G++ V ++ +
Sbjct: 287 LFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQ--QGLIGDVSVATSLMSM 344
Query: 497 LGRSGLLSEAIE-FINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILERE 549
+ G L A + FIN D D + W +++ S + G+H + L R+
Sbjct: 345 YSKCGELEIAEQLFINIE--DRDVVSWSAMIAS-----YEQAGQHDEAISLFRD 391
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 115/247 (46%), Gaps = 16/247 (6%)
Query: 2 GSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVG 61
G ++ VSW MM+ + + EA+ TF M F PN F +RA + VG
Sbjct: 564 GFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVG 623
Query: 62 RVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFA 121
V S+++ G F S VG L+DM+ K CG IES+ + F ++ + +V+WN M++ +A
Sbjct: 624 MSVHSSLIQCG-FCSQTPVGNSLVDMYAK-CGMIESSEKCFIEISNKYIVSWNTMLSAYA 681
Query: 122 QMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWV-IRSGLALDL 180
G ++ LF M + PD + S L+AC L+ GK++ + R + ++
Sbjct: 682 AHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEV 741
Query: 181 CVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCD 240
+VD+ K + G V+ R + +V W AL+ + R+ C+
Sbjct: 742 EHYACMVDLLGKAGLFGEAVEMMRRMR--VKTSVGVWGALL-----------NSSRMHCN 788
Query: 241 MLQGNVA 247
+ N A
Sbjct: 789 LWLSNAA 795
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 9/211 (4%)
Query: 256 VLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKS 315
+L+ C N F Q+H I GL N LIN Y+ R + +R FD + +
Sbjct: 11 MLRECKN---FRCLLQVHGSLIVSGLKP----HNQLINAYSLFQRQDLSRVIFDSVRDPG 63
Query: 316 LVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIG--KGEQIH 373
+V +++ R E L + G Y+ + AC G++ KG +IH
Sbjct: 64 VVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIH 123
Query: 374 ALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYAT 433
L+ + G E+++ I AL+ MY K + +A QVF+ M ++V+TW +++SG A++G ++
Sbjct: 124 DLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSS 183
Query: 434 KALELFYEMLETGVKPNDVTYIAVLSACSHV 464
AL LF++M V + V+ ++ A S +
Sbjct: 184 AALLLFHDMRSCCVDIDHVSLYNLIPAVSKL 214
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 286 bits (732), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 181/589 (30%), Positives = 293/589 (49%), Gaps = 48/589 (8%)
Query: 98 AHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAE 157
A + E + + WN+++ +A+ E+ I + RM+ G PD FT S L AC E
Sbjct: 97 AQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGE 156
Query: 158 LELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSW 217
++ G+ +H + S L V +L+ MY + G +RR+F+ M E + VSW
Sbjct: 157 TLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGI---ARRLFDRMFERDAVSW 213
Query: 218 TALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSV--------------------- 256
A+I Y G EA LF M V + T++ +
Sbjct: 214 NAVINCYA-SEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMR 272
Query: 257 --------------LKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLE 302
LKAC+ + G+++H I ++ V N+LI MY++ L
Sbjct: 273 NFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLR 332
Query: 303 CARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEH--TTGIGACSFTYACLLSGA 360
A F E SL + +I+ + LN E +H G S T A +L
Sbjct: 333 HALIVFRQTEENSLCTWNSIISGYAQ-LNKSEEASHLLREMLVAGFQPNSITLASILPLC 391
Query: 361 ACIGTIGKGEQIHALVVKSG-FETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITW 419
A I + G++ H +++ F+ + N+L+ +Y+K G AA QV + M R+ +T+
Sbjct: 392 ARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTY 451
Query: 420 TSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRH 479
TS+I G+ G AL LF EM +G+KP+ VT +AVLSACSH L+ EG + F M+
Sbjct: 452 TSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQC 511
Query: 480 CHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGE 539
+G+ P ++H++CMVD+ GR+G L++A + I++MP W +LL +C +HGNT++G+
Sbjct: 512 EYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGK 571
Query: 540 HAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQV 599
AA+ +LE +P +P Y+L++N+YA W +A +R M+ + K+ G +WI+ ++
Sbjct: 572 WAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGF 631
Query: 600 HKFHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTDFVLHDVEDEQKE 648
F VGDTS P+A Y LD L +K N + ++ V+ +E
Sbjct: 632 SLFSVGDTSSPEACNTYPLLDGLNQLMKD-----NAGYAINKVQSSDEE 675
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 128/482 (26%), Positives = 210/482 (43%), Gaps = 67/482 (13%)
Query: 117 MTRFAQMGYPEDSIDLF--FRMLLSGYTPDRFTLTSA---LTACAELELLSVGKQLHSWV 171
+ A G+ D+ F R+ S D L SA L+AC ++ G Q+H+
Sbjct: 10 LGHLASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHC 69
Query: 172 IRSGLALDLCVGCSLVDMYAKCAVDG---SLVDSRRVFNSMPEHNVVSWTALIAGYVRGS 228
I SG+ + LV Y+ + S++++ + + +P W LIA Y +
Sbjct: 70 ISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLP------WNVLIASYAKNE 123
Query: 229 GQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVA 288
E E + + M+ + P+ FT+ SVLKAC D FG +H + V
Sbjct: 124 LFE-EVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVC 182
Query: 289 NSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIG 347
N+LI+MY R + AR+ FD +FE+ VS +++ + E + +G+
Sbjct: 183 NALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVE 242
Query: 348 ACSFTY-----ACLLSG----------------------------AAC--IGTIGKGEQI 372
T+ CL +G AC IG I G++I
Sbjct: 243 VSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEI 302
Query: 373 HALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYA 432
H L + S ++ ++ N LI+MYSKC + AL VF + ++ TW SIISG+A+ +
Sbjct: 303 HGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKS 362
Query: 433 TKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPR-----V 487
+A L EML G +PN +T ++L C+ + + G K F HC+ + +
Sbjct: 363 EEASHLLREMLVAGFQPNSITLASILPLCARIANLQHG-KEF----HCYILRRKCFKDYT 417
Query: 488 EHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILE 547
+ +VDV +SG + A + + M D + + SL+ +GN GE + L
Sbjct: 418 MLWNSLVDVYAKSGKIVAAKQVSDLMS-KRDEVTYTSLIDG---YGNQ--GEGGVALALF 471
Query: 548 RE 549
+E
Sbjct: 472 KE 473
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/491 (23%), Positives = 225/491 (45%), Gaps = 47/491 (9%)
Query: 8 VSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGS 67
+ W +++ +A N + E + + M+ G P+ + + + L+AC +L + GRVV GS
Sbjct: 110 LPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGS 169
Query: 68 VLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPE 127
+ + Y S + V LI M+ K ++ A R+F++M ER+ V+WN ++ +A G
Sbjct: 170 IEVSSY-KSSLYVCNALISMY-KRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWS 227
Query: 128 DSIDLFFRMLLSGY-----------------------------------TPDRFTLTSAL 152
++ +LF +M SG + D + L
Sbjct: 228 EAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGL 287
Query: 153 TACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH 212
AC+ + + +GK++H I S V +L+ MY+KC L + VF E+
Sbjct: 288 KACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCK---DLRHALIVFRQTEEN 344
Query: 213 NVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQL 272
++ +W ++I+GY + + +EA L +ML PN T +S+L CA + + G++
Sbjct: 345 SLCTWNSIISGYAQ-LNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEF 403
Query: 273 HSQTIKLG-LSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLN 331
H ++ + NSL+++YA+SG++ A++ DL+ ++ V+ +++D
Sbjct: 404 HCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGE 463
Query: 332 SDETLNHETEHT-TGIGACSFTYACLLSGAACIGTIGKGEQIH-ALVVKSGFETNLSINN 389
L E T +GI T +LS + + +GE++ + + G L +
Sbjct: 464 GGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFS 523
Query: 390 ALISMYSKCGNKEAALQVFNDMGDR-NVITWTSIISGFAKHGYATKALELFYEMLETGVK 448
++ +Y + G A + ++M + + TW ++++ HG ++LE +K
Sbjct: 524 CMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLE--MK 581
Query: 449 PNDVTYIAVLS 459
P + Y +++
Sbjct: 582 PENPGYYVLIA 592
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 112/234 (47%), Gaps = 15/234 (6%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
+ L +W S++S +A + EA +ML GF PN + L C+ G+
Sbjct: 343 ENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKE 402
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
+L+ F + + L+D++ K G I +A +V + M +R+ VT+ ++ +
Sbjct: 403 FHCYILRRKCFKDYTMLWNSLVDVYAKS-GKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQ 461
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLH-----SWVIRSGLAL 178
G ++ LF M SG PD T+ + L+AC+ +L+ G++L + IR L
Sbjct: 462 GEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQH 521
Query: 179 DLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMP-EHNVVSWTALI-AGYVRGSGQ 230
C +VD+Y + G L ++ + ++MP + + +W L+ A ++ G+ Q
Sbjct: 522 FSC----MVDLYGRA---GFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQ 568
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 285 bits (730), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 188/620 (30%), Positives = 317/620 (51%), Gaps = 51/620 (8%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
R+ V+W ++M + N EA+ F DM + G P + L A +N G+
Sbjct: 237 RNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQS 296
Query: 65 FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG 124
+ G ++ +G L++ + K G IE A VF++M E++VVTWNL+++ + Q G
Sbjct: 297 HAIAIVNGMELDNI-LGTSLLNFYCK-VGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQG 354
Query: 125 YPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGC 184
ED+I + M L D TL + ++A A E L +GK++ + IR D+ +
Sbjct: 355 LVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLAS 414
Query: 185 SLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQG 244
+++DMYAKC GS+VD+++VF+S E +++ W L+A Y SG EA+RLF M
Sbjct: 415 TVMDMYAKC---GSIVDAKKVFDSTVEKDLILWNTLLAAYAE-SGLSGEALRLFYGMQLE 470
Query: 245 NVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECA 304
V PN T+ N + SL+ R+G+++ A
Sbjct: 471 GVPPNVITW-------------------------------NLIILSLL----RNGQVDEA 495
Query: 305 RKCFDLLFEKS-----LVSCETIVDVIVRDLNSDET-LNHETEHTTGIGACSFTYACLLS 358
+ F L + S L+S T+++ +V++ S+E L +G+ +F+ LS
Sbjct: 496 KDMF-LQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALS 554
Query: 359 GAACIGTIGKGEQIHALVVKSGFETNL-SINNALISMYSKCGNKEAALQVFNDMGDRNVI 417
A + ++ G IH ++++ ++L SI +L+ MY+KCG+ A +VF +
Sbjct: 555 ACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELP 614
Query: 418 TWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSM 477
++IS +A +G +A+ L+ + G+KP+++T VLSAC+H G I++ + F +
Sbjct: 615 LSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDI 674
Query: 478 RHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTEL 537
+ P +EHY MVD+L +G +A+ I MP DA + +SL+ SC TEL
Sbjct: 675 VSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTEL 734
Query: 538 GEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEV-- 595
++ ++ +LE EP + Y+ +SN YA E W +V +R+ MK K + K+ G SWI++
Sbjct: 735 VDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITG 794
Query: 596 ENQVHKFHVGDTSHPQAQKI 615
E VH F D +H + +I
Sbjct: 795 EEGVHVFVANDKTHTRINEI 814
Score = 238 bits (606), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 149/493 (30%), Positives = 259/493 (52%), Gaps = 10/493 (2%)
Query: 23 EHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVLKTG-YFDSHVSVG 81
E +LVT +D P Y L+ C S G+ + +LK G ++ + +
Sbjct: 53 EALSLVTEMDFRNLRIGPEIY--GEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIE 110
Query: 82 CELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGY 141
+L+ + K C +E A +F K++ RNV +W ++ ++G E ++ F ML +
Sbjct: 111 TKLVIFYAK-CDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEI 169
Query: 142 TPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVD 201
PD F + + AC L+ G+ +H +V++SGL + V SL DMY KC G L D
Sbjct: 170 FPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKC---GVLDD 226
Query: 202 SRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACA 261
+ +VF+ +P+ N V+W AL+ GYV+ +G+ +EA+RLF DM + V P T S+ L A A
Sbjct: 227 ASKVFDEIPDRNAVAWNALMVGYVQ-NGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASA 285
Query: 262 NLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCET 321
N+ G+Q H+ I G+ N + SL+N Y + G +E A FD +FEK +V+
Sbjct: 286 NMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNL 345
Query: 322 IVDVIVRD-LNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSG 380
I+ V+ L D + + T A L+S AA + G+++ ++
Sbjct: 346 IISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHS 405
Query: 381 FETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFY 440
FE+++ + + ++ MY+KCG+ A +VF+ ++++I W ++++ +A+ G + +AL LFY
Sbjct: 406 FESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFY 465
Query: 441 EMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRS 500
M GV PN +T+ ++ + G +DE F M+ G++P + + M++ + ++
Sbjct: 466 GMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQS-SGIIPNLISWTTMMNGMVQN 524
Query: 501 GLLSEAIEFINSM 513
G EAI F+ M
Sbjct: 525 GCSEEAILFLRKM 537
Score = 186 bits (473), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 133/496 (26%), Positives = 242/496 (48%), Gaps = 51/496 (10%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
R++ SW +++ + AL+ F++MLE+ +P+ + +AC + GR V
Sbjct: 136 RNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGV 195
Query: 65 FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG 124
G V+K+G D V V L DM+ K CG ++ A +VF+++ +RN V WN +M + Q G
Sbjct: 196 HGYVVKSGLEDC-VFVASSLADMYGK-CGVLDDASKVFDEIPDRNAVAWNALMVGYVQNG 253
Query: 125 YPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGC 184
E++I LF M G P R T+++ L+A A + + GKQ H+ I +G+ LD +G
Sbjct: 254 KNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGT 313
Query: 185 SLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQG 244
SL++ Y K G + + VF+ M E +VV+W +I+GYV+ G ++A+ + M
Sbjct: 314 SLLNFYCKV---GLIEYAEMVFDRMFEKDVVTWNLIISGYVQ-QGLVEDAIYMCQLMRLE 369
Query: 245 NVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECA 304
+ + T ++++ A A + G+++ I+ + +A+++++MYA+ G + A
Sbjct: 370 KLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDA 429
Query: 305 RKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIG 364
+K FD EK L+ T LL+ A G
Sbjct: 430 KKVFDSTVEKDLILWNT----------------------------------LLAAYAESG 455
Query: 365 TIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDR----NVITWT 420
G+ ++ + G N+ N +I + G + A +F M N+I+WT
Sbjct: 456 LSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWT 515
Query: 421 SIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHC 480
++++G ++G + +A+ +M E+G++PN + LSAC+H+ + G R
Sbjct: 516 TMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIG-------RTI 568
Query: 481 HGVVPRVEHYACMVDV 496
HG + R ++ +V +
Sbjct: 569 HGYIIRNLQHSSLVSI 584
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 162/357 (45%), Gaps = 32/357 (8%)
Query: 228 SGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLG--LSAVN 285
+G+ +EA+ L +M N+ + +L+ C D G+Q+H++ +K G +
Sbjct: 48 NGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNE 107
Query: 286 CVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRD-------LNSDETLNH 338
+ L+ YA+ LE A F L +++ S I+ V R + E L +
Sbjct: 108 YIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLEN 167
Query: 339 ETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKC 398
E + C GA G+G +H VVKSG E + + ++L MY KC
Sbjct: 168 EIFPDNFV----VPNVCKACGALKWSRFGRG--VHGYVVKSGLEDCVFVASSLADMYGKC 221
Query: 399 GNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVL 458
G + A +VF+++ DRN + W +++ G+ ++G +A+ LF +M + GV+P VT L
Sbjct: 222 GVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCL 281
Query: 459 SACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGL-------LSEAIEFIN 511
SA +++G ++EG H +V +E + ++LG S L L E E +
Sbjct: 282 SASANMGGVEEG-----KQSHAIAIVNGME----LDNILGTSLLNFYCKVGLIEYAEMVF 332
Query: 512 SMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMI-LEREPHDPATYILLSNLYATEE 567
+ D + W ++ G E + +++ LE+ +D T L + A E
Sbjct: 333 DRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTE 389
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 192/605 (31%), Positives = 322/605 (53%), Gaps = 26/605 (4%)
Query: 1 MGSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACS-NSLYFS 59
M + D+ W +M++ + ++ F +M + G +++ F L C SL F
Sbjct: 149 MPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGSLDF- 207
Query: 60 VGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEK--MQERNVVTWNLMM 117
G+ V V+K G+F + SV LI M+ C + A VFE+ + R+ VT+N+++
Sbjct: 208 -GKQVHSLVIKAGFFIAS-SVVNALITMYFN-CQVVVDACLVFEETDVAVRDQVTFNVVI 264
Query: 118 TRFAQMGYPEDSIDLFFR-MLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGL 176
A G+ D L FR ML + P T S + +C+ ++G Q+H I++G
Sbjct: 265 DGLA--GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCS---CAAMGHQVHGLAIKTGY 319
Query: 177 ALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMR 236
V + + MY+ G+ + +VF S+ E ++V+W +I+ Y + + AM
Sbjct: 320 EKYTLVSNATMTMYSSFEDFGA---AHKVFESLEEKDLVTWNTMISSYNQAK-LGKSAMS 375
Query: 237 LFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYA 296
++ M V P+ FTF S+L A D E + + IK GLS+ ++N+LI+ Y+
Sbjct: 376 VYKRMHIIGVKPDEFTFGSLL---ATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYS 432
Query: 297 RSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHET---EHTTGIGACSFTY 353
++G++E A F+ K+L+S I+ + E L + E I ++T
Sbjct: 433 KNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTL 492
Query: 354 ACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGD 413
+ LLS ++ G Q HA V++ G I NALI+MYS+CG + +L+VFN M +
Sbjct: 493 STLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSE 552
Query: 414 RNVITWTSIISGFAKHGYATKALELFYEMLETG-VKPNDVTYIAVLSACSHVGLIDEGWK 472
++V++W S+IS +++HG A+ + M + G V P+ T+ AVLSACSH GL++EG +
Sbjct: 553 KDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLE 612
Query: 473 HFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEF--INSMPLDADAMVWRSLLGSCR 530
FNSM HGV+ V+H++C+VD+LGR+G L EA I+ + + VW +L +C
Sbjct: 613 IFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACA 672
Query: 531 VHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGY 590
HG+ +LG+ AK+++E+E DP+ Y+ LSN+YA W + R+ + +K+ G
Sbjct: 673 AHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGC 732
Query: 591 SWIEV 595
SW+ +
Sbjct: 733 SWMRL 737
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 116/493 (23%), Positives = 226/493 (45%), Gaps = 63/493 (12%)
Query: 109 NVVTWNLMMTRFAQMGYPEDSIDLFFRM-LLSGYTPDRFTLTSALTACAELELLSVGKQL 167
++ N +T + G +++ LF + + PD+++++ A+T L G Q+
Sbjct: 20 TLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQV 79
Query: 168 HSWVIRSGLALDLCVGCSLVDMYAKCAVDGSL------VD-------------------- 201
H + IRSGL V +L+ +Y + SL +D
Sbjct: 80 HCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDI 139
Query: 202 --SRRVFNSMPEHNVVS-WTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLK 258
+ VF+ MPE + V+ W A+I G + SG + ++ LF +M + V + F F+++L
Sbjct: 140 EYAFEVFDKMPERDDVAIWNAMITG-CKESGYHETSVELFREMHKLGVRHDKFGFATILS 198
Query: 259 ACANLPDFG---FGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKS 315
C D+G FG+Q+HS IK G + V N+LI MY + A C L+FE++
Sbjct: 199 MC----DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDA--C--LVFEET 250
Query: 316 LVSC--ETIVDVIVRDL---NSDET-LNHETEHTTGIGACSFTYACLLSGAACIGTIGKG 369
V+ + +V++ L DE+ L + T+ ++ +C G
Sbjct: 251 DVAVRDQVTFNVVIDGLAGFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAM---G 307
Query: 370 EQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKH 429
Q+H L +K+G+E ++NA ++MYS + AA +VF + +++++TW ++IS + +
Sbjct: 308 HQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQA 367
Query: 430 GYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHC---HGVVPR 486
A+ ++ M GVKP++ T+ ++L+ + +++ ++ C G+ +
Sbjct: 368 KLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLE-------MVQACIIKFGLSSK 420
Query: 487 VEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMIL 546
+E ++ ++G + +A + + L + + W +++ +G G +L
Sbjct: 421 IEISNALISAYSKNGQIEKA-DLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLL 479
Query: 547 EREPHD-PATYIL 558
E E P Y L
Sbjct: 480 ESEVRILPDAYTL 492
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 177/547 (32%), Positives = 287/547 (52%), Gaps = 29/547 (5%)
Query: 95 IESAHRVFEKMQERN-VVTWNLMMTRFAQMGYPEDSIDLFFRMLLSG-YTPDRFTLTSAL 152
I A ++F++ +R+ N M+ + + DS L+ + + PD FT T+
Sbjct: 26 IGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLT 85
Query: 153 TACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH 212
+C+ + G QLHS + R G D+ V +VDMYAK G + +R F+ MP
Sbjct: 86 KSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKF---GKMGCARNAFDEMPHR 142
Query: 213 NVVSWTALIAGYVRGSGQEQEAMRLF------CDMLQGNVAPNGFTFSSVLKACANLPDF 266
+ VSWTALI+GY+R G+ A +LF D++ N +GF S + + L
Sbjct: 143 SEVSWTALISGYIR-CGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRL--- 198
Query: 267 GFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVI 326
F E H I ++I+ Y ++ ARK FD + E++LVS T++
Sbjct: 199 -FDEMTHKTVI---------TWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGY 248
Query: 327 VRDLNSDE--TLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETN 384
++ E L E + TT + T +L + G + GE H V + +
Sbjct: 249 CQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKK 308
Query: 385 LSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLE 444
+ + A++ MYSKCG E A ++F++M ++ V +W ++I G+A +G A AL+LF M+
Sbjct: 309 VKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMM- 367
Query: 445 TGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLS 504
KP+++T +AV++AC+H GL++EG K F+ MR G+ ++EHY CMVD+LGR+G L
Sbjct: 368 IEEKPDEITMLAVITACNHGGLVEEGRKWFHVMREM-GLNAKIEHYGCMVDLLGRAGSLK 426
Query: 505 EAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYA 564
EA + I +MP + + ++ S L +C + + E E K +E EP + Y+LL NLYA
Sbjct: 427 EAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYA 486
Query: 565 TEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELDELAS 624
++RW D ++ M++ + KE G S IE+ V +F GDT+HP + I+ L +L
Sbjct: 487 ADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLLM 546
Query: 625 KIKKLGY 631
+ + Y
Sbjct: 547 HMNEEKY 553
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 105/480 (21%), Positives = 215/480 (44%), Gaps = 39/480 (8%)
Query: 12 SMMSCFANNSMEHEALVTFLDML-EHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVLK 70
SM+ + ++ + D+ E F P+ + FT ++CS S+ G + + +
Sbjct: 47 SMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWR 106
Query: 71 TGY-FDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDS 129
G+ D +VS G ++DM+ K G + A F++M R+ V+W +++ + + G + +
Sbjct: 107 FGFCADMYVSTG--VVDMYAK-FGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLA 163
Query: 130 IDLFFRM------LLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVG 183
LF +M ++ D F + +T+ L K + +W + G
Sbjct: 164 SKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTT-------MIHG 216
Query: 184 -CSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDM- 241
C++ D+ A +R++F++MPE N+VSW +I GY + Q QE +RLF +M
Sbjct: 217 YCNIKDIDA----------ARKLFDAMPERNLVSWNTMIGGYCQNK-QPQEGIRLFQEMQ 265
Query: 242 LQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRL 301
++ P+ T SVL A ++ GE H + L V ++++MY++ G +
Sbjct: 266 ATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEI 325
Query: 302 ECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGAA 361
E A++ FD + EK + S ++ + N+ L+ T +++
Sbjct: 326 EKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEEKPDEITMLAVITACN 385
Query: 362 CIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGN-KEAALQVFNDMGDRNVITWT 420
G + +G + ++ + G + ++ + + G+ KEA + N + N I +
Sbjct: 386 HGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILS 445
Query: 421 SIISGFAKHGYATKALELFYEMLETGVKP-NDVTYIAVLSACSHVGLIDEGWKHFNSMRH 479
S +S ++ +A + + +E ++P ND Y+ + ++ D+ W F +++
Sbjct: 446 SFLSACGQYKDIERAERILKKAVE--LEPQNDGNYVLL----RNLYAADKRWDDFGMVKN 499
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 121/278 (43%), Gaps = 44/278 (15%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDM-LEHGFYPNEYCFTAALRACSNSLYFSVGR 62
+R+LVSW +M+ + N E + F +M P++ + L A S++ S+G
Sbjct: 235 ERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGE 294
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
V + D V V ++DM+ K CG+IE A R+F++M E+ V +WN M+ +A
Sbjct: 295 WCHCFVQRKK-LDKKVKVCTAILDMYSK-CGEIEKAKRIFDEMPEKQVASWNAMIHGYAL 352
Query: 123 MGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDL-C 181
G ++DLF M++ PD T+ + +TAC L+ G++ + GL +
Sbjct: 353 NGNARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEH 411
Query: 182 VGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDM 241
GC +VD+ + GSL ++ + +MP
Sbjct: 412 YGC-MVDLLGRA---GSLKEAEDLITNMP------------------------------- 436
Query: 242 LQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKL 279
PNG SS L AC D E++ + ++L
Sbjct: 437 ----FEPNGIILSSFLSACGQYKDIERAERILKKAVEL 470
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 284 bits (726), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 186/596 (31%), Positives = 310/596 (52%), Gaps = 58/596 (9%)
Query: 40 PNEYCFTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAH 99
PN++ F L++C+ GR++ V+KTG+F V L+ M++K + A
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFF-VDVFTATALVSMYMK-VKQVTDAL 86
Query: 100 RVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELE 159
+V ++M ER + + N ++ + G+ D+ +F +SG + T+ S L C ++E
Sbjct: 87 KVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIE 146
Query: 160 LLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTA 219
G QLH ++SG +++ VG SLV MY++C G V + R+F +P +VV++ A
Sbjct: 147 ---GGMQLHCLAMKSGFEMEVYVGTSLVSMYSRC---GEWVLAARMFEKVPHKSVVTYNA 200
Query: 220 LIAGYVRGSGQEQEAMRLFCDMLQ-----GNVAPNGFTFSSVLKACANLPDFGFGEQLHS 274
I+G + E M L + + PN TF + + ACA+L + +G QLH
Sbjct: 201 FISGLM-----ENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHG 255
Query: 275 QTIKLGLSAVNCVANSLINMYARSGRLECARKCF-DLLFEKSLVSCETIVDVIVRDLNSD 333
+K V +LI+MY++ + A F +L ++L+S +++ ++ + +
Sbjct: 256 LVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHE 315
Query: 334 ETLN-HETEHTTGIGACSFTYACLLSG--------------------------------- 359
+ E + G+ S T+ L+SG
Sbjct: 316 TAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLL 375
Query: 360 AAC--IGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFN--DMGDRN 415
+AC I T+ G++IH V+K+ E ++ + +LI MY KCG A ++F+ + ++
Sbjct: 376 SACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKD 435
Query: 416 VITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFN 475
+ W +ISG+ KHG A+E+F + E V+P+ T+ AVLSACSH G +++G + F
Sbjct: 436 PVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFR 495
Query: 476 SMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNT 535
M+ +G P EH CM+D+LGRSG L EA E I+ M + ++ SLLGSCR H +
Sbjct: 496 LMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDP 554
Query: 536 ELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYS 591
LGE AA + E EP +PA +++LS++YA ERW DV +IR+ + QK+++K G S
Sbjct: 555 VLGEEAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 178/340 (52%), Gaps = 10/340 (2%)
Query: 141 YTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLV 200
++P++FT L +CA+L + G+ LH+ V+++G +D+ +LV MY K +
Sbjct: 27 HSPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVK---QVT 83
Query: 201 DSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKAC 260
D+ +V + MPE + S A ++G + +G ++A R+F D N T +SVL C
Sbjct: 84 DALKVLDEMPERGIASVNAAVSGLLE-NGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC 142
Query: 261 ANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCE 320
++ G QLH +K G V SL++MY+R G A + F+ + KS+V+
Sbjct: 143 GDIEG---GMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYN 199
Query: 321 TIVDVIVRD--LNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVK 378
+ ++ + +N ++ + + T+ ++ A + + G Q+H LV+K
Sbjct: 200 AFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMK 259
Query: 379 SGFETNLSINNALISMYSKCGNKEAALQVFNDMGD-RNVITWTSIISGFAKHGYATKALE 437
F+ + ALI MYSKC ++A VF ++ D RN+I+W S+ISG +G A+E
Sbjct: 260 KEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVE 319
Query: 438 LFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSM 477
LF ++ G+KP+ T+ +++S S +G + E +K F M
Sbjct: 320 LFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERM 359
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 150/319 (47%), Gaps = 19/319 (5%)
Query: 247 APNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARK 306
+PN FTF +LK+CA L D G LH+Q +K G A +L++MY + ++ A K
Sbjct: 28 SPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALK 87
Query: 307 CFDLLFEKSLVSCETIVDVIVRD-LNSDETLNHETEHTTGIGACSFTYACLLSGAACIGT 365
D + E+ + S V ++ + D +G G S T A +L G G
Sbjct: 88 VLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GD 144
Query: 366 IGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISG 425
I G Q+H L +KSGFE + + +L+SMYS+CG A ++F + ++V+T+ + ISG
Sbjct: 145 IEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISG 204
Query: 426 FAKHGYATKALELFYEMLE-TGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVV 484
++G +F M + + +PNDVT++ ++AC+ + + G R HG+V
Sbjct: 205 LMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYG-------RQLHGLV 257
Query: 485 PRVEHY------ACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELG 538
+ E ++D+ + A + + + W S++ ++G E
Sbjct: 258 MKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETA 317
Query: 539 -EHAAKMILEREPHDPATY 556
E K+ E D AT+
Sbjct: 318 VELFEKLDSEGLKPDSATW 336
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 4/168 (2%)
Query: 2 GSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVG 61
G K D +W S++S F+ EA F ML P+ C T+ L ACS+ G
Sbjct: 328 GLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNG 387
Query: 62 RVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQ--ERNVVTWNLMMTR 119
+ + G V+K + + V LIDM++K CG A R+F++ + ++ V WN+M++
Sbjct: 388 KEIHGHVIKAAA-ERDIFVLTSLIDMYMK-CGLSSWARRIFDRFEPKPKDPVFWNVMISG 445
Query: 120 FAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQL 167
+ + G E +I++F + P T T+ L+AC+ + G Q+
Sbjct: 446 YGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQI 493
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 281 bits (720), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 196/656 (29%), Positives = 310/656 (47%), Gaps = 91/656 (13%)
Query: 62 RVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQE---RNVVTWNLMMT 118
R V VL + + S+ LI ++ + G + A VFE + ++ WN ++
Sbjct: 73 RQVHAQVLLSDFIFRSGSLAANLISVYAR-LGLLLDARNVFETVSLVLLSDLRLWNSILK 131
Query: 119 RFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLAL 178
G E++++L+ M G T D + L L AC L + + H+ VI+ GL
Sbjct: 132 ANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKE 191
Query: 179 DLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQE---QEAM 235
+L V L+ +Y K G + D+ +F MP N +SW +I G+ QE + A+
Sbjct: 192 NLHVVNELLTLYPKA---GRMGDAYNLFVEMPVRNRMSWNVMIKGF----SQEYDCESAV 244
Query: 236 RLFCDMLQGNVAPNGFTFSSVLK-----------------------------------AC 260
++F M + P+ T++SVL C
Sbjct: 245 KIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVC 304
Query: 261 ANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCE 320
A L E++H IK G N+LI++Y + G+++ A F + K + S
Sbjct: 305 AELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWN 364
Query: 321 TIVDVIVRDLNSDETLN-----HETEH-----------TTGIGAC--------------- 349
+++ V DE L+ E H T+ I C
Sbjct: 365 SLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQ 424
Query: 350 ---------SFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGN 400
S T C+LS A + + G +IH V+++ N+ + NAL++MY+KCG
Sbjct: 425 MQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGL 484
Query: 401 KEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSA 460
VF + D+++I+W SII G+ HG+A KAL +F M+ +G P+ + +AVLSA
Sbjct: 485 LSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSA 544
Query: 461 CSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAM 520
CSH GL+++G + F SM G+ P+ EHYAC+VD+LGR G L EA E + +MP++
Sbjct: 545 CSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVC 604
Query: 521 VWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMK 580
V +LL SCR+H N ++ E A + EP +Y+LLSN+Y+ RW + A +R K
Sbjct: 605 VLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAK 664
Query: 581 QKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTD 636
+K + K +G SWIEV+ + +KF G + + IY L++L S + K G P D
Sbjct: 665 KKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHMLKKG--PTHD 718
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 111/482 (23%), Positives = 202/482 (41%), Gaps = 82/482 (17%)
Query: 6 DLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVF 65
DL W S++ ++ + AL + M + G + Y LRAC F + R
Sbjct: 122 DLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFH 181
Query: 66 GSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGY 125
V++ G ++ V EL+ ++ K G + A+ +F +M RN ++WN+M+ F+Q
Sbjct: 182 TQVIQIG-LKENLHVVNELLTLYPKA-GRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYD 239
Query: 126 PEDSIDLFFRMLLSGYTPDRFTLTSAL--------------------------------- 152
E ++ +F M + PD T TS L
Sbjct: 240 CESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAV 299
Query: 153 --TACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMP 210
+ CAELE LS+ +++H +VI+ G L +L+ +Y K G + D+ +F +
Sbjct: 300 FFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGK---QGKVKDAEHLFRQIR 356
Query: 211 EHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQG----NVAPNGFTFSSVLKA------- 259
+ SW +LI +V +G+ EA+ LF ++ + NV N T++SV+K
Sbjct: 357 NKGIESWNSLITSFV-DAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRG 415
Query: 260 ----------------------------CANLPDFGFGEQLHSQTIKLGLSAVNCVANSL 291
CA LP G ++H I+ +S V N+L
Sbjct: 416 DDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNAL 475
Query: 292 INMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACS 350
+NMYA+ G L F+ + +K L+S +I+ +++ L+ + ++G
Sbjct: 476 VNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDG 535
Query: 351 FTYACLLSGAACIGTIGKGEQI-HALVVKSGFETNLSINNALISMYSKCGNKEAALQVFN 409
+LS + G + KG +I +++ + G E ++ + + G + A ++
Sbjct: 536 IALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVK 595
Query: 410 DM 411
+M
Sbjct: 596 NM 597
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 154/342 (45%), Gaps = 48/342 (14%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
K D V+W S++SC + + L F M G + C+ S+
Sbjct: 256 KPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEK 315
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ- 122
V G V+K G F+ ++ LI ++ K G ++ A +F +++ + + +WN ++T F
Sbjct: 316 VHGYVIKGG-FEEYLPSRNALIHVYGKQ-GKVKDAEHLFRQIRNKGIESWNSLITSFVDA 373
Query: 123 --------------------------------------MGYPEDSIDLFFRMLLSGYTPD 144
G +DS++ F +M S +
Sbjct: 374 GKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLAN 433
Query: 145 RFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRR 204
T+ L+ CAEL L++G+++H VIR+ ++ ++ V +LV+MYAKC G L +
Sbjct: 434 SVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKC---GLLSEGSL 490
Query: 205 VFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKAC--AN 262
VF ++ + +++SW ++I GY G ++A+ +F M+ P+G +VL AC A
Sbjct: 491 VFEAIRDKDLISWNSIIKGYGM-HGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAG 549
Query: 263 LPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECA 304
L + G E +S + + GL ++++ R G L+ A
Sbjct: 550 LVEKG-REIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEA 590
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 102/208 (49%), Gaps = 6/208 (2%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
K ++V+W S++ ++L F M N L C+ ++GR
Sbjct: 396 KANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGRE 455
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
+ G V++T ++ V L++M+ K CG + VFE ++++++++WN ++ +
Sbjct: 456 IHGHVIRTS-MSENILVQNALVNMYAK-CGLLSEGSLVFEAIRDKDLISWNSIIKGYGMH 513
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQL-HSWVIRSGLALDLCV 182
G+ E ++ +F RM+ SG+ PD L + L+AC+ L+ G+++ +S R GL
Sbjct: 514 GFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEH 573
Query: 183 GCSLVDMYAKCAVDGSLVDSRRVFNSMP 210
+VD+ + G L ++ + +MP
Sbjct: 574 YACIVDLLGRV---GFLKEASEIVKNMP 598
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 281 bits (718), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 185/571 (32%), Positives = 299/571 (52%), Gaps = 26/571 (4%)
Query: 34 LEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCG 93
LE P LR+C +++ S + G ++KTG +V L
Sbjct: 20 LESLLSPQCQKLINDLRSCRDTVEVSR---IHGYMVKTGLDKDDFAVSKLLA---FSSVL 73
Query: 94 DIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALT 153
DI A +FE + N+ +N M+ ++ PE + +F ++ G T DRF+ + L
Sbjct: 74 DIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLK 133
Query: 154 ACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH- 212
+C+ +S+G+ LH +RSG + + +L+ Y C G + D+R+VF+ MP+
Sbjct: 134 SCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVC---GKISDARKVFDEMPQSV 190
Query: 213 NVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQL 272
+ V+++ L+ GY++ S ++ A+ LF M + V N T S L A ++L D E
Sbjct: 191 DAVTFSTLMNGYLQVS-KKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESA 249
Query: 273 HSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNS 332
H IK+GL + +LI MY ++G + AR+ FD K +V+ ++D +
Sbjct: 250 HVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLL 309
Query: 333 DET--LNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNA 390
+E L + ++ + S T+ LLS A G + L+ + + + A
Sbjct: 310 EECVWLLRQMKYEK-MKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTA 368
Query: 391 LISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETG--VK 448
L+ MY+K G E A+++FN M D++V +WT++ISG+ HG A +A+ LF +M E V+
Sbjct: 369 LVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVR 428
Query: 449 PNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIE 508
PN++T++ VL+ACSH GL+ EG + F M + P+VEHY C+VD+LGR+G L EA E
Sbjct: 429 PNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYE 488
Query: 509 FINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYAT--- 565
I ++P+ +D+ WR+LL +CRV+GN +LGE + E PA ILL+ +A
Sbjct: 489 LIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAGN 548
Query: 566 EERWYDVAAIRKTMKQKKIIKEAGYSWIEVE 596
E+ D + K KEAGYS IE+E
Sbjct: 549 PEKSLD-------NELNKGRKEAGYSAIEIE 572
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 108/465 (23%), Positives = 210/465 (45%), Gaps = 21/465 (4%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR 62
S +L + +M+ ++ + A F + G + + F L++CS L S+G
Sbjct: 86 SNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGE 145
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKM-QERNVVTWNLMMTRFA 121
+ G L++G+ + LI + CG I A +VF++M Q + VT++ +M +
Sbjct: 146 GLHGIALRSGFM-VFTDLRNALIHFYCV-CGKISDARKVFDEMPQSVDAVTFSTLMNGYL 203
Query: 122 QMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLC 181
Q+ ++DLF M S + TL S L+A ++L LS + H I+ GL LDL
Sbjct: 204 QVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLH 263
Query: 182 VGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDM 241
+ +L+ MY K G + +RR+F+ +VV+W +I Y + +G +E + L M
Sbjct: 264 LITALIGMYGKT---GGISSARRIFDCAIRKDVVTWNCMIDQYAK-TGLLEECVWLLRQM 319
Query: 242 LQGNVAPNGFTFSSVLKACANLPDFGFGEQLHS--QTIKLGLSAVNCVANSLINMYARSG 299
+ PN TF +L +CA G + + ++ L A+ + +L++MYA+ G
Sbjct: 320 KYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAI--LGTALVDMYAKVG 377
Query: 300 RLECARKCFDLLFEKSLVSCETIVD-----VIVRDLNSDETLNHETEHTTGIGACSFTYA 354
LE A + F+ + +K + S ++ + R+ + N E + T+
Sbjct: 378 LLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLARE--AVTLFNKMEEENCKVRPNEITFL 435
Query: 355 CLLSGAACIGTIGKGEQIHALVVKS-GFETNLSINNALISMYSKCGNKEAALQVFNDMG- 412
+L+ + G + +G + +V++ F + ++ + + G E A ++ ++
Sbjct: 436 VVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPI 495
Query: 413 DRNVITWTSIISGFAKHGYATKALELFYEMLETG-VKPNDVTYIA 456
+ W ++++ +G A + + E G P D +A
Sbjct: 496 TSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLA 540
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 125/290 (43%), Gaps = 19/290 (6%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
++D+V+W M+ +A + E + M PN F L +C+ S VGR
Sbjct: 290 RKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRT 349
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
V +L+ +G L+DM+ K G +E A +F +M++++V +W M++ +
Sbjct: 350 V-ADLLEEERIALDAILGTALVDMYAK-VGLLEKAVEIFNRMKDKDVKSWTAMISGYGAH 407
Query: 124 GYPEDSIDLFFRMLLSG--YTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLC 181
G +++ LF +M P+ T L AC+ L+ G + ++ + +
Sbjct: 408 GLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEA-YSFTPK 466
Query: 182 V---GCSLVDMYAKCAVDGSLVDSRRVFNSMP-EHNVVSWTALIAG---YVRGSGQEQEA 234
V GC +VD+ + G L ++ + ++P + +W AL+A Y E
Sbjct: 467 VEHYGC-VVDLLGRA---GQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVM 522
Query: 235 MRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAV 284
MRL +M G P + A A P+ +L+ + G SA+
Sbjct: 523 MRL-AEM--GETHPADAILLAGTHAVAGNPEKSLDNELNKGRKEAGYSAI 569
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 281 bits (718), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 157/495 (31%), Positives = 277/495 (55%), Gaps = 46/495 (9%)
Query: 138 LSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDG 197
+S +P ++ + AL GK++H+ +I++G DL + L+ ++ KC G
Sbjct: 28 VSSLSPAKY-IAGALQEHINSPAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKC---G 83
Query: 198 SLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVL 257
L +R+VF+ +P+ + ++ +I+GY++ G +E + L M +G+T S VL
Sbjct: 84 CLSYARQVFDELPKPTLSAYNYMISGYLK-HGLVKELLLLVQRMSYSGEKADGYTLSMVL 142
Query: 258 KACAN------LPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLL 311
KA + LP +H++ IK + + + +L++ Y +SG+LE AR F+ +
Sbjct: 143 KASNSRGSTMILPR-SLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETM 201
Query: 312 FEKSLVSCETIV----------------------DVIVRDL------NSDETLNHETEHT 343
++++V C +++ D++V + S ET +
Sbjct: 202 KDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMY 261
Query: 344 TGIGACSF-----TYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKC 398
+ F T+A ++ + + + G+Q+HA ++KSG T++ + ++L+ MY+KC
Sbjct: 262 ISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKC 321
Query: 399 GNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVL 458
G A +VF+ M ++NV +WTS+I G+ K+G +ALELF M E ++PN VT++ L
Sbjct: 322 GGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGAL 381
Query: 459 SACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDAD 518
SACSH GL+D+G++ F SM+ + + P++EHYAC+VD++GR+G L++A EF +MP D
Sbjct: 382 SACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPD 441
Query: 519 AMVWRSLLGSCRVHGNTELGEHAAKMILE-REPHDPATYILLSNLYATEERWYDVAAIRK 577
+ +W +LL SC +HGN EL AA + + P Y+ LSN+YA+ ++W +V+ IR+
Sbjct: 442 SDIWAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIRE 501
Query: 578 TMKQKKIIKEAGYSW 592
MK+++I K G SW
Sbjct: 502 VMKRRRISKTIGRSW 516
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 113/478 (23%), Positives = 219/478 (45%), Gaps = 49/478 (10%)
Query: 40 PNEYCFTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAH 99
P +Y AL+ NS G+ + ++KTG F +++ +L+ + +K CG + A
Sbjct: 33 PAKY-IAGALQEHINSPAPKAGKKIHADIIKTG-FQPDLNISIKLLILHLK-CGCLSYAR 89
Query: 100 RVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAE-- 157
+VF+++ + + +N M++ + + G ++ + L RM SG D +TL+ L A
Sbjct: 90 QVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRG 149
Query: 158 ---LELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNV 214
+ S+ + +H+ +I+ + LD + +LVD Y K G L +R VF +M + NV
Sbjct: 150 STMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVK---SGKLESARTVFETMKDENV 206
Query: 215 VSWTALIAGYV-------------------------------RGSGQEQEAMRLFCDMLQ 243
V T++I+GY+ R + ++ ++ M +
Sbjct: 207 VCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQR 266
Query: 244 GNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLEC 303
PN TF+SV+ AC+ L G+Q+H+Q +K G+ + +SL++MYA+ G +
Sbjct: 267 AGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGIND 326
Query: 304 ARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTT-GIGACSFTYACLLSGAAC 362
AR+ FD + EK++ S +++D ++ N +E L T I T+ LS +
Sbjct: 327 ARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSH 386
Query: 363 IGTIGKGEQI-HALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDR-NVITWT 420
G + KG +I ++ + + ++ + + G+ A + M +R + W
Sbjct: 387 SGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWA 446
Query: 421 SIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMR 478
+++S HG A E+ + Y+A+ S+V ++ W + + +R
Sbjct: 447 ALLSSCNLHGNVELASIAASELFKLNADKRPGAYLAL----SNVYASNDKWDNVSKIR 500
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 114/220 (51%), Gaps = 6/220 (2%)
Query: 5 RDLVSWCSMMSCFANN-SMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
+D+V + +M+ F+ + ++ ++ M GF+PN F + + ACS VG+
Sbjct: 235 KDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQ 294
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
V ++K+G + +H+ +G L+DM+ K CG I A RVF++MQE+NV +W M+ + +
Sbjct: 295 VHAQIMKSGVY-THIKMGSSLLDMYAK-CGGINDARRVFDQMQEKNVFSWTSMIDGYGKN 352
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRS-GLALDLCV 182
G PE++++LF RM P+ T AL+AC+ L+ G ++ + R + +
Sbjct: 353 GNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEH 412
Query: 183 GCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIA 222
+VD+ + + R P+ ++ W AL++
Sbjct: 413 YACIVDLMGRAGDLNKAFEFARAMPERPDSDI--WAALLS 450
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 280 bits (715), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 175/545 (32%), Positives = 286/545 (52%), Gaps = 51/545 (9%)
Query: 76 SHVSVGCELI-DMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFF 134
S++SV ELI + G ++ AH++F+++ + +V N ++ AQ PE ++ L+
Sbjct: 42 SNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYT 101
Query: 135 RMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCA 194
M G +PDR+T T L AC++LE S G H V+R G L+ V +L+ +A C
Sbjct: 102 EMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANC- 160
Query: 195 VDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFS 254
G L + +F+ + + V+W+++ +GY + G+ EAMRLF +M
Sbjct: 161 --GDLGIASELFDDSAKAHKVAWSSMTSGYAK-RGKIDEAMRLFDEM------------- 204
Query: 255 SVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEK 314
+ +Q+ N +I + ++ AR+ FD EK
Sbjct: 205 ------------PYKDQV--------------AWNVMITGCLKCKEMDSARELFDRFTEK 238
Query: 315 SLVSCETIVDVIVRDLNSDETLNHETE-HTTGIGACSFTYACLLSGAACIGTIGKGEQIH 373
+V+ ++ V E L E G T LLS A +G + G+++H
Sbjct: 239 DVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLH 298
Query: 374 ALV-----VKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAK 428
+ V S I NALI MY+KCG+ + A++VF + DR++ TW ++I G A
Sbjct: 299 IYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLAL 358
Query: 429 HGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVE 488
H +A ++E+F EM V PN+VT+I V+ ACSH G +DEG K+F+ MR + + P ++
Sbjct: 359 H-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIK 417
Query: 489 HYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILER 548
HY CMVD+LGR+G L EA F+ SM ++ +A+VWR+LLG+C+++GN ELG++A + +L
Sbjct: 418 HYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSM 477
Query: 549 EPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTS 608
+ Y+LLSN+YA+ +W V +RK ++ K G S IE ++ +S
Sbjct: 478 RKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIEEDDDKLMMRYLLSS 537
Query: 609 HPQAQ 613
P+++
Sbjct: 538 EPESR 542
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 166/368 (45%), Gaps = 80/368 (21%)
Query: 8 VSWCSMMSCFANNSMEHEALVT-FLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFG 66
VS C+ + + SM+ E V+ + +M + G P+ Y FT L+ACS + S G G
Sbjct: 77 VSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHG 136
Query: 67 SVLKTGYFDSH---------------VSVGCELID------------------------- 86
V++ G+ + + + EL D
Sbjct: 137 KVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDE 196
Query: 87 -----------------MFVKGC---GDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYP 126
+ + GC +++SA +F++ E++VVTWN M++ + GYP
Sbjct: 197 AMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYP 256
Query: 127 EDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSG-LALDLCVGC- 184
++++ +F M +G PD T+ S L+ACA L L GK+LH +++ + ++ + VG
Sbjct: 257 KEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTP 316
Query: 185 ---SLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDM 241
+L+DMYAKC GS+ + VF + + ++ +W LI G + ++ +F +M
Sbjct: 317 IWNALIDMYAKC---GSIDRAIEVFRGVKDRDLSTWNTLIVGL--ALHHAEGSIEMFEEM 371
Query: 242 LQGNVAPNGFTFSSVLKACANLPDFGFGEQLHS-----QTIKLGLSAVNCVANSLINMYA 296
+ V PN TF V+ AC++ G + S I+ + C +++M
Sbjct: 372 QRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGC----MVDMLG 427
Query: 297 RSGRLECA 304
R+G+LE A
Sbjct: 428 RAGQLEEA 435
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 112/229 (48%), Gaps = 15/229 (6%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR 62
+++D+V+W +M+S + N EAL F +M + G +P+ + L AC+ G+
Sbjct: 236 TEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGK 295
Query: 63 VVFGSVLKTGYFDSHVSVGCE----LIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMT 118
+ +L+T S + VG LIDM+ K CG I+ A VF +++R++ TWN ++
Sbjct: 296 RLHIYILETASVSSSIYVGTPIWNALIDMYAK-CGSIDRAIEVFRGVKDRDLSTWNTLIV 354
Query: 119 RFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLAL 178
A + + E SI++F M P+ T + AC+ + G++ S ++R +
Sbjct: 355 GLA-LHHAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFS-LMRDMYNI 412
Query: 179 DLCV---GCSLVDMYAKCAVDGSLVDSRRVFNSMP-EHNVVSWTALIAG 223
+ + GC +VDM + G L ++ SM E N + W L+
Sbjct: 413 EPNIKHYGC-MVDMLGRA---GQLEEAFMFVESMKIEPNAIVWRTLLGA 457
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 175/601 (29%), Positives = 296/601 (49%), Gaps = 31/601 (5%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGF---YPNEYCFTAALRACSNSLYFSVG 61
RD+V+W +++S N L M G PN +ACSN G
Sbjct: 190 RDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEG 249
Query: 62 RVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFA 121
R + G +K G S V + + K G+ A+ F ++ + ++ +W ++ A
Sbjct: 250 RCLHGFAVKNGLASSKF-VQSSMFSFYSKS-GNPSEAYLSFRELGDEDMFSWTSIIASLA 307
Query: 122 QMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLC 181
+ G E+S D+F+ M G PD ++ + ++ L+ GK H +VIR +LD
Sbjct: 308 RSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDST 367
Query: 182 VGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH-NVVSWTALIAGYVRGSGQEQEAMRLFCD 240
V SL+ MY K + L + ++F + E N +W ++ GY + + + LF
Sbjct: 368 VCNSLLSMYCKFEL---LSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVK-CIELFRK 423
Query: 241 MLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGR 300
+ + + + +SV+ +C+++ G+ LH +K L V NSLI++Y + G
Sbjct: 424 IQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGD 483
Query: 301 LECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEH----------TTGIGACS 350
L A + F CE +VI + ++ E + S
Sbjct: 484 LTVAWRMF----------CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSS 533
Query: 351 FTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFND 410
T LL G++ +G+ IH + ++ E NLS++ ALI MY+KCG+ E + ++F+
Sbjct: 534 ITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDA 593
Query: 411 MGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEG 470
++ + W +ISG+ HG A+ LF +M E+ VKP T++A+LSAC+H GL+++G
Sbjct: 594 GNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQG 653
Query: 471 WKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCR 530
K F M H + V P ++HY+C+VD+L RSG L EA + SMP D ++W +LL SC
Sbjct: 654 KKLFLKM-HQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCM 712
Query: 531 VHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGY 590
HG E+G A+ + +P + YI+L+N+Y+ +W + R+ M++ + K AG+
Sbjct: 713 THGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGH 772
Query: 591 S 591
S
Sbjct: 773 S 773
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 153/582 (26%), Positives = 267/582 (45%), Gaps = 49/582 (8%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR 62
++RD+ W S++ +N +L F ML G P+ + + AC+ L+F VG
Sbjct: 86 TRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGT 145
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
V G VLK G FD + +VG + + K CG ++ A VF++M +R+VV W +++ Q
Sbjct: 146 FVHGLVLKHGGFDRNTAVGASFVYFYSK-CGFLQDACLVFDEMPDRDVVAWTAIISGHVQ 204
Query: 123 MGYPEDSIDLFFRMLLSGY---TPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALD 179
G E + +M +G P+ TL AC+ L L G+ LH + +++GLA
Sbjct: 205 NGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASS 264
Query: 180 LCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFC 239
V S+ Y+K G+ ++ F + + ++ SWT++IA R SG +E+ +F
Sbjct: 265 KFVQSSMFSFYSK---SGNPSEAYLSFRELGDEDMFSWTSIIASLAR-SGDMEESFDMFW 320
Query: 240 DMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSG 299
+M + P+G S ++ + G+ H I+ S + V NSL++MY +
Sbjct: 321 EMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFE 380
Query: 300 RLECARKCFDLLFEK-------------SLVSCETIVDVIVRDLNSDETLNHETEHTTGI 346
L A K F + E+ + C + R + GI
Sbjct: 381 LLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKI-----------QNLGI 429
Query: 347 GACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQ 406
S + ++S + IG + G+ +H VVK+ + +S+ N+LI +Y K G+ A +
Sbjct: 430 EIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWR 489
Query: 407 VFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGL 466
+F + D NVITW ++I+ + + KA+ LF M+ KP+ +T + +L AC + G
Sbjct: 490 MFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGS 548
Query: 467 IDEGWKHFNSMRHCHGVVPRVEH------YACMVDVLGRSGLLSEAIEFINSMPLDADAM 520
++ G + H + EH A ++D+ + G L ++ E ++ DA+
Sbjct: 549 LERG-------QMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGN-QKDAV 600
Query: 521 VWRSLLGSCRVHGNTELGEHAAKMILERE--PHDPATYILLS 560
W ++ +HG+ E + E + P P LLS
Sbjct: 601 CWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLS 642
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 138/510 (27%), Positives = 247/510 (48%), Gaps = 27/510 (5%)
Query: 67 SVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYP 126
+++ TG ++ V +LI + G + RVF + R++ WN ++ G
Sbjct: 48 ALIITGGLSENIFVASKLISSYAS-YGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDY 106
Query: 127 EDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIR-SGLALDLCVGCS 185
S+ FF MLLSG +PD FT ++ACAEL VG +H V++ G + VG S
Sbjct: 107 ARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGAS 166
Query: 186 LVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGN 245
V Y+KC G L D+ VF+ MP+ +VV+WTA+I+G+V+ +G+ + + C M
Sbjct: 167 FVYFYSKC---GFLQDACLVFDEMPDRDVVAWTAIISGHVQ-NGESEGGLGYLCKMHSAG 222
Query: 246 V---APNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLE 302
PN T +AC+NL G LH +K GL++ V +S+ + Y++SG
Sbjct: 223 SDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPS 282
Query: 303 CARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETE-HTTGIGACSFTYACLLSGAA 361
A F L ++ + S +I+ + R + +E+ + E G+ +CL++
Sbjct: 283 EAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELG 342
Query: 362 CIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDR-NVITWT 420
+ + +G+ H V++ F + ++ N+L+SMY K A ++F + + N W
Sbjct: 343 KMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWN 402
Query: 421 SIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHC 480
+++ G+ K K +ELF ++ G++ + + +V+S+CSH+G + G HC
Sbjct: 403 TMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLG-----KSLHC 457
Query: 481 HGVVPRVEH----YACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTE 536
+ V ++ ++D+ G+ G L+ A D + + W +++ S VH E
Sbjct: 458 YVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMF--CEADTNVITWNAMIAS-YVH--CE 512
Query: 537 LGEHAAKMI--LEREPHDPATYILLSNLYA 564
E A + + E P++ L++ L A
Sbjct: 513 QSEKAIALFDRMVSENFKPSSITLVTLLMA 542
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 107/236 (45%), Gaps = 24/236 (10%)
Query: 373 HALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYA 432
+AL++ G N+ + + LIS Y+ G + +VF+ + R++ W SII +G
Sbjct: 47 NALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDY 106
Query: 433 TKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHC----HGVVPRVE 488
++L F+ ML +G P+ T V+SAC+ + W H + H HG R
Sbjct: 107 ARSLCFFFSMLLSGQSPDHFTAPMVVSACAEL-----LWFHVGTFVHGLVLKHGGFDRNT 161
Query: 489 HY-ACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELG------EHA 541
A V + G L +A + MP D D + W +++ +G +E G H+
Sbjct: 162 AVGASFVYFYSKCGFLQDACLVFDEMP-DRDVVAWTAIISGHVQNGESEGGLGYLCKMHS 220
Query: 542 AKMILEREPHDPAT----YILLSNLYATEE-RWYDVAAIRKTMKQKKIIKEAGYSW 592
A +++ +P T + SNL A +E R A++ + K ++ + +S+
Sbjct: 221 AGSDVDKP--NPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSF 274
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 276 bits (707), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 172/529 (32%), Positives = 265/529 (50%), Gaps = 64/529 (12%)
Query: 68 VLKTGYFDSHVSVGCELIDMFVKGCGD---IESAHRVFEKMQERNVVTWNLMMTRFAQMG 124
+LKTG F H + + F + + AH + ++ N T N ++ +A
Sbjct: 62 MLKTGLF--HDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAYANSS 119
Query: 125 YPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGC 184
PE ++ +F MLL PD+++ T L ACA G+Q+H I+SGL D+ V
Sbjct: 120 TPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVEN 179
Query: 185 SLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQG 244
+LV++Y + G +R+V + MP + VSW +L++ Y+ G EA LF +M +
Sbjct: 180 TLVNVYGRS---GYFEIARKVLDRMPVRDAVSWNSLLSAYLE-KGLVDEARALFDEMEER 235
Query: 245 NVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECA 304
NV F +I+ YA +G ++ A
Sbjct: 236 NVESWNF---------------------------------------MISGYAAAGLVKEA 256
Query: 305 RKCFDLLFEKSLVSCETIV---------DVIVRDLNSDETLNHETEHTTGIGACSFTYAC 355
++ FD + + +VS +V + ++ N + L+ TE G FT
Sbjct: 257 KEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFN--KMLDDSTEKPDG-----FTLVS 309
Query: 356 LLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRN 415
+LS A +G++ +GE +H + K G E + AL+ MYSKCG + AL+VF R+
Sbjct: 310 VLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRD 369
Query: 416 VITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFN 475
V TW SIIS + HG ALE+F EM+ G KPN +T+I VLSAC+HVG++D+ K F
Sbjct: 370 VSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFE 429
Query: 476 SMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNT 535
M + V P +EHY CMVD+LGR G + EA E +N +P D +++ SLLG+C+ G
Sbjct: 430 MMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQL 489
Query: 536 ELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKI 584
E E A +LE D + Y +SNLYA++ RW V R+ M+ +++
Sbjct: 490 EQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMRAERV 538
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 180/389 (46%), Gaps = 55/389 (14%)
Query: 165 KQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGY 224
+Q H++++++GL D LV A ++ + + N + N + ++I Y
Sbjct: 56 QQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAY 115
Query: 225 VRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAV 284
S E A+ +F +ML G V P+ ++F+ VLKACA F G Q+H IK GL
Sbjct: 116 ANSSTPEV-ALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTD 174
Query: 285 NCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDE--TLNHETEH 342
V N+L+N+Y RSG E ARK D + + VS +++ + DE L E E
Sbjct: 175 VFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEME- 233
Query: 343 TTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKE 402
E N+ N +IS Y+ G +
Sbjct: 234 ---------------------------------------ERNVESWNFMISGYAAAGLVK 254
Query: 403 AALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGV-KPNDVTYIAVLSAC 461
A +VF+ M R+V++W ++++ +A G + LE+F +ML+ KP+ T ++VLSAC
Sbjct: 255 EAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSAC 314
Query: 462 SHVGLIDEG-WKHFNSMRHCHGVVPRVEHY--ACMVDVLGRSGLLSEAIEFINSMPLDAD 518
+ +G + +G W H + HG+ +E + +VD+ + G + +A+E + D
Sbjct: 315 ASLGSLSQGEWVHVYIDK--HGI--EIEGFLATALVDMYSKCGKIDKALEVFRATS-KRD 369
Query: 519 AMVWRSLLGSCRVHGNTELGEHAAKMILE 547
W S++ VHG LG+ A ++ E
Sbjct: 370 VSTWNSIISDLSVHG---LGKDALEIFSE 395
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 189/420 (45%), Gaps = 88/420 (20%)
Query: 12 SMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVLKT 71
S++ +AN+S AL F +ML +P++Y FT L+AC+ F GR + G +K+
Sbjct: 110 SVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKS 169
Query: 72 GYFDSHVSVGCELIDMFVKGC------------------------------GDIESAHRV 101
G + V V L++++ + G ++ A +
Sbjct: 170 GLV-TDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARAL 228
Query: 102 FEKMQERN-------------------------------VVTWNLMMTRFAQMGYPEDSI 130
F++M+ERN VV+WN M+T +A +G + +
Sbjct: 229 FDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVL 288
Query: 131 DLFFRML-LSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDM 189
++F +ML S PD FTL S L+ACA L LS G+ +H ++ + G+ ++ + +LVDM
Sbjct: 289 EVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDM 348
Query: 190 YAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGY-VRGSGQEQEAMRLFCDMLQGNVAP 248
Y+KC G + + VF + + +V +W ++I+ V G G ++A+ +F +M+ P
Sbjct: 349 YSKC---GKIDKALEVFRATSKRDVSTWNSIISDLSVHGLG--KDALEIFSEMVYEGFKP 403
Query: 249 NGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANS------LINMYARSGRLE 302
NG TF VL AC ++ +L +S+V V + ++++ R G++E
Sbjct: 404 NGITFIGVLSACNHVGMLDQARKLFEM-----MSSVYRVEPTIEHYGCMVDLLGRMGKIE 458
Query: 303 CARKCFD--------LLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYA 354
A + + +L E L +C+ + + ++ L ++G S YA
Sbjct: 459 EAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYA 518
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 121/246 (49%), Gaps = 11/246 (4%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGF-YPNEYCFTAALRACSNSLYFSVGRV 63
RD+VSW +M++ +A+ +E L F ML+ P+ + + L AC++ S G
Sbjct: 266 RDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEW 325
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
V + K G + + L+DM+ K CG I+ A VF +R+V TWN +++ +
Sbjct: 326 VHVYIDKHG-IEIEGFLATALVDMYSK-CGKIDKALEVFRATSKRDVSTWNSIISDLSVH 383
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLH---SWVIRSGLALDL 180
G +D++++F M+ G+ P+ T L+AC + +L ++L S V R ++
Sbjct: 384 GLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIE- 442
Query: 181 CVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCD 240
GC +VD+ + G + ++ + N +P + G + GQ ++A R+
Sbjct: 443 HYGC-MVDLLGRM---GKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANR 498
Query: 241 MLQGNV 246
+L+ N+
Sbjct: 499 LLELNL 504
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 116/257 (45%), Gaps = 12/257 (4%)
Query: 311 LFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGE 370
+ EK + C ++I+R + L + E+ + CS T +LS ++ + +
Sbjct: 1 MVEKDIYMC---AEIIIRPQAYNLRL-LQKENLKKMSVCSSTPVPILSFTERAKSLTEIQ 56
Query: 371 QIHALVVKSG-FETNLSINN--ALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFA 427
Q HA ++K+G F S + A + + A + N +G N T S+I +A
Sbjct: 57 QAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAYA 116
Query: 428 KHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRV 487
AL +F EML V P+ ++ VL AC+ +EG + + + G+V V
Sbjct: 117 NSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEG-RQIHGLFIKSGLVTDV 175
Query: 488 EHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILE 547
+V+V GRSG A + ++ MP+ DA+ W SLL + G L + A + E
Sbjct: 176 FVENTLVNVYGRSGYFEIARKVLDRMPV-RDAVSWNSLLSAYLEKG---LVDEARALFDE 231
Query: 548 REPHDPATYILLSNLYA 564
E + ++ + + YA
Sbjct: 232 MEERNVESWNFMISGYA 248
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 276 bits (706), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 166/579 (28%), Positives = 293/579 (50%), Gaps = 32/579 (5%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
+RD SW ++++ A N + E F M G E F L++C L + R
Sbjct: 124 ERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQ 183
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
+ +V+K GY +V + ++D++ K C + A RVF+++ + V+WN+++ R+ +M
Sbjct: 184 LHCAVVKYGY-SGNVDLETSIVDVYGK-CRVMSDARRVFDEIVNPSDVSWNVIVRRYLEM 241
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVG 183
G+ ++++ +FF+ML P T++S + AC+ L VGK +H+ ++ + D V
Sbjct: 242 GFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVS 301
Query: 184 CSLVDMYAKC----------------------------AVDGSLVDSRRVFNSMPEHNVV 215
S+ DMY KC A+ G ++R +F+ MPE N+V
Sbjct: 302 TSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIV 361
Query: 216 SWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQ 275
SW A++ GYV + EA+ M Q + T +L C+ + D G+Q H
Sbjct: 362 SWNAMLGGYVHAH-EWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGF 420
Query: 276 TIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFE-KSLVSCETIVDVIVRDLNSDE 334
+ G VAN+L++MY + G L+ A F + E + VS ++ + R S++
Sbjct: 421 IYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQ 480
Query: 335 TLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISM 394
L+ +T A LL+G A I + G+ IH +++ G++ ++ I A++ M
Sbjct: 481 ALSFFEGMQVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDM 540
Query: 395 YSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTY 454
YSKC + A++VF + R++I W SII G ++G + + ELF + GVKP+ VT+
Sbjct: 541 YSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTF 600
Query: 455 IAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMP 514
+ +L AC G ++ G+++F+SM + + P+VEHY CM+++ + G L + EF+ MP
Sbjct: 601 LGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMP 660
Query: 515 LDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDP 553
D + + +C+ + ++LG AAK ++ P
Sbjct: 661 FDPPMQMLTRINDACQRYRWSKLGAWAAKRLMNDHYLQP 699
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 144/513 (28%), Positives = 246/513 (47%), Gaps = 55/513 (10%)
Query: 92 CGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSA 151
CG ++ A +FE+M ER+ +WN ++T AQ G ++ +F RM G +
Sbjct: 109 CGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGV 168
Query: 152 LTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPE 211
L +C + L + +QLH V++ G + ++ + S+VD+Y KC V + D+RRVF+ +
Sbjct: 169 LKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRV---MSDARRVFDEIVN 225
Query: 212 HNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQ 271
+ VSW ++ Y+ G EA+ +F ML+ NV P T SSV+ AC+ G+
Sbjct: 226 PSDVSWNVIVRRYLE-MGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKV 284
Query: 272 LHSQTIKLGLSAVNCVANSLINMYARSGRLECARKC------------------------ 307
+H+ +KL + A V+ S+ +MY + RLE AR+
Sbjct: 285 IHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGL 344
Query: 308 -------FDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGAC-SFTYACLLSG 359
FDL+ E+++VS ++ V DE L+ T I + T +L+
Sbjct: 345 TREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNV 404
Query: 360 AACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGD-RNVIT 418
+ I + G+Q H + + G++TN+ + NAL+ MY KCG ++A F M + R+ ++
Sbjct: 405 CSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVS 464
Query: 419 WTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMR 478
W ++++G A+ G + +AL F+E ++ KP+ T +L+ C+++ ++ G +
Sbjct: 465 WNALLTGVARVGRSEQALS-FFEGMQVEAKPSKYTLATLLAGCANIPALNLG-------K 516
Query: 479 HCHGVVPR------VEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLL-GSCRV 531
HG + R V MVD+ + AIE D ++W S++ G CR
Sbjct: 517 AIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAA-TRDLILWNSIIRGCCRN 575
Query: 532 HGNTELGEHAAKMILEREPHDPATYILLSNLYA 564
+ E+ E M+LE E P L L A
Sbjct: 576 GRSKEVFE--LFMLLENEGVKPDHVTFLGILQA 606
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 13/145 (8%)
Query: 389 NALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVK 448
N I Y KCG + A ++F +M +R+ +W ++I+ A++G + + +F M GV+
Sbjct: 100 NRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVR 159
Query: 449 PNDVTYIAVLSACSHVGLIDEGWKHFNSMRHC----HGVVPRVEHYACMVDVLGRSGLLS 504
+ ++ VL +C GLI + HC +G V+ +VDV G+ ++S
Sbjct: 160 ATETSFAGVLKSC---GLILD--LRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMS 214
Query: 505 EAI----EFINSMPLDADAMVWRSL 525
+A E +N + + +V R L
Sbjct: 215 DARRVFDEIVNPSDVSWNVIVRRYL 239
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 163/479 (34%), Positives = 256/479 (53%), Gaps = 37/479 (7%)
Query: 165 KQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGY 224
K++++ +I GL+ + +VD C + + R+FN + NV + ++I Y
Sbjct: 27 KKINASIIIHGLSQSSFMVTKMVDF---CDKIEDMDYATRLFNQVSNPNVFLYNSIIRAY 83
Query: 225 VRGSGQEQEAMRLFCDMLQGNVA-PNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSA 283
S + +R++ +L+ + P+ FTF + K+CA+L G+Q+H K G
Sbjct: 84 THNS-LYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRF 142
Query: 284 VNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVR-----------DLNS 332
N+LI+MY + L A K FD ++E+ ++S +++ R L
Sbjct: 143 HVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLML 202
Query: 333 DETLNHETEHT---TGIG----ACSFTYACLLSGA--------------ACIGTIGKGEQ 371
D+T+ T TGIG A F L+G A +G++ G+
Sbjct: 203 DKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKW 262
Query: 372 IHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGY 431
IH + GF + NALI MYSKCG A+Q+F M ++VI+W+++ISG+A HG
Sbjct: 263 IHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGN 322
Query: 432 ATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYA 491
A A+E F EM VKPN +T++ +LSACSHVG+ EG ++F+ MR + + P++EHY
Sbjct: 323 AHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYG 382
Query: 492 CMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPH 551
C++DVL R+G L A+E +MP+ D+ +W SLL SCR GN ++ A ++E EP
Sbjct: 383 CLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPE 442
Query: 552 DPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHP 610
D Y+LL+N+YA +W DV+ +RK ++ + + K G S IEV N V +F GD S P
Sbjct: 443 DMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKP 501
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 120/475 (25%), Positives = 212/475 (44%), Gaps = 79/475 (16%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGF-YPNEYCFTAALRACSNSLYFSVG 61
S ++ + S++ + +NS+ + + + +L F P+ + F ++C++ +G
Sbjct: 69 SNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLG 128
Query: 62 RVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFA 121
+ V G + K G HV LIDM++K D+ AH+VF++M ER+V++WN +++ +A
Sbjct: 129 KQVHGHLCKFGP-RFHVVTENALIDMYMK-FDDLVDAHKVFDEMYERDVISWNSLLSGYA 186
Query: 122 QMGYPE-------------------------------DSIDLFFRMLLSGYTPDRFTLTS 150
++G + +++D F M L+G PD +L S
Sbjct: 187 RLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLIS 246
Query: 151 ALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMP 210
L +CA+L L +GK +H + R G V +L++MY+KC V + + ++F M
Sbjct: 247 VLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGV---ISQAIQLFGQME 303
Query: 211 EHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFG--- 267
+V+SW+ +I+GY G A+ F +M + V PNG TF +L AC+++ +
Sbjct: 304 GKDVISWSTMISGYAY-HGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGL 362
Query: 268 --FGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKS--------LV 317
F I+ + C LI++ AR+G+LE A + + K L
Sbjct: 363 RYFDMMRQDYQIEPKIEHYGC----LIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLS 418
Query: 318 SCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHAL-- 375
SC T ++ V + D + E E + YA L GK E + L
Sbjct: 419 SCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADL----------GKWEDVSRLRK 468
Query: 376 ------VVKSGFETNLSINNALISMYSKCGNK------EAALQVFNDMGDRNVIT 418
+ K+ + + +NN + S +K LQ+F D++VIT
Sbjct: 469 MIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFWTEISIVLQLFTSHQDQDVIT 523
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 272 bits (695), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 174/559 (31%), Positives = 276/559 (49%), Gaps = 46/559 (8%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
+ L +W MMS + E + F +++ G E F L+ S + + +
Sbjct: 178 KSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQL 237
Query: 65 FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG 124
S K G D +SV LI + K CG+ A R+F+ ++V+WN ++ A+
Sbjct: 238 HCSATKKG-LDCEISVVNSLISAYGK-CGNTHMAERMFQDAGSWDIVSWNAIICATAKSE 295
Query: 125 YPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGC 184
P ++ LF M G++P++ T S L + ++LLS G+Q+H +I++G + +G
Sbjct: 296 NPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGN 355
Query: 185 SLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQG 244
+L+D YAKC G+L DSR F+ + + N+V W AL++GY G + LF MLQ
Sbjct: 356 ALIDFYAKC---GNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPI--CLSLFLQMLQM 410
Query: 245 NVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECA 304
P +TFS+ LK+C +QLHS +++G + V +SL+ YA++ + A
Sbjct: 411 GFRPTEYTFSTALKSCCVTEL----QQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDA 466
Query: 305 RKCFDLLF-EKSLVSCETIVDVIVRDLNSDETLN--------HETEHTTGIGACS----- 350
D S+V + + R E++ I ACS
Sbjct: 467 LLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYH 526
Query: 351 -------------------FTYACLLSGAACIGTIGKGEQIHALVVKSGFE-TNLSINNA 390
+T+ +LS + + + G IH L+ K+ F + + N
Sbjct: 527 EEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNV 586
Query: 391 LISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPN 450
LI MY KCG+ + ++VF + ++N+ITWT++IS HGY +ALE F E L G KP+
Sbjct: 587 LIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPD 646
Query: 451 DVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFI 510
V++I++L+AC H G++ EG F M+ +GV P ++HY C VD+L R+G L EA I
Sbjct: 647 RVSFISILTACRHGGMVKEGMGLFQKMKD-YGVEPEMDHYRCAVDLLARNGYLKEAEHLI 705
Query: 511 NSMPLDADAMVWRSLLGSC 529
MP ADA VWR+ L C
Sbjct: 706 REMPFPADAPVWRTFLDGC 724
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/384 (28%), Positives = 194/384 (50%), Gaps = 13/384 (3%)
Query: 82 CELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGY 141
C I + G++ A +VF++M ERN V++N ++ +++ G + + +F M GY
Sbjct: 52 CNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGY 111
Query: 142 TPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLAL-DLCVGCSLVDMYAKCAVDGSLV 200
P++ T+ S L +CA L+ + G QLH ++ GL + D VG L+ +Y + + L
Sbjct: 112 LPNQSTV-SGLLSCASLD-VRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDL---LE 166
Query: 201 DSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKAC 260
+ +VF MP ++ +W +++ + G +E M F ++++ + +F VLK
Sbjct: 167 MAEQVFEDMPFKSLETWNHMMS-LLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGV 225
Query: 261 ANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCE 320
+ + D +QLH K GL V NSLI+ Y + G A + F +VS
Sbjct: 226 SCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWN 285
Query: 321 TIVDVIVRDLNSDETLN---HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVV 377
I+ + N + L EH G TY +L ++ + + G QIH +++
Sbjct: 286 AIICATAKSENPLKALKLFVSMPEH--GFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLI 343
Query: 378 KSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALE 437
K+G ET + + NALI Y+KCGN E + F+ + D+N++ W +++SG+A L
Sbjct: 344 KNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKD-GPICLS 402
Query: 438 LFYEMLETGVKPNDVTYIAVLSAC 461
LF +ML+ G +P + T+ L +C
Sbjct: 403 LFLQMLQMGFRPTEYTFSTALKSC 426
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 134/573 (23%), Positives = 267/573 (46%), Gaps = 66/573 (11%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
+R+ VS+ +++ ++ +A F +M G+ PN+ + L +C+ SL G
Sbjct: 77 ERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQST-VSGLLSCA-SLDVRAGTQ 134
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
+ G LK G F + VG L+ ++ + +E A +VFE M +++ TWN MM+
Sbjct: 135 LHGLSLKYGLFMADAFVGTCLLCLYGR-LDLLEMAEQVFEDMPFKSLETWNHMMSLLGHR 193
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVG 183
G+ ++ + F ++ G + + L + ++ L + KQLH + GL ++ V
Sbjct: 194 GFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVV 253
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQ 243
SL+ Y KC G+ + R+F ++VSW A+I + S +A++LF M +
Sbjct: 254 NSLISAYGKC---GNTHMAERMFQDAGSWDIVSWNAIICATAK-SENPLKALKLFVSMPE 309
Query: 244 GNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLEC 303
+PN T+ SVL + + G Q+H IK G + N+LI+ YA+ G LE
Sbjct: 310 HGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLED 369
Query: 304 ARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHE---TEHTTGIGACSFTYACLLSGA 360
+R CFD + +K++V ++ N D + G +T++ L +
Sbjct: 370 SRLCFDYIRDKNIVCWNALLSGYA---NKDGPICLSLFLQMLQMGFRPTEYTFSTALK-S 425
Query: 361 ACIGTIGKGEQIHALVVKSGFETN---LS-----------INNALI-------------- 392
C+ + +Q+H+++V+ G+E N LS +N+AL+
Sbjct: 426 CCVTEL---QQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPL 482
Query: 393 ----SMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVK 448
+YS+ G ++++ + + + ++W I+ ++ Y + +ELF ML++ ++
Sbjct: 483 NIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIR 542
Query: 449 PNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYAC--------MVDVLGRS 500
P+ T++++LS CS + + G HG++ + + ++C ++D+ G+
Sbjct: 543 PDKYTFVSILSLCSKLCDLTLG-------SSIHGLITKTD-FSCADTFVCNVLIDMYGKC 594
Query: 501 GLLSEAIEFINSMPLDADAMVWRSLLGSCRVHG 533
G + ++ + + + W +L+ +HG
Sbjct: 595 GSIRSVMKVFEETR-EKNLITWTALISCLGIHG 626
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 185/386 (47%), Gaps = 18/386 (4%)
Query: 148 LTSALTACAELELLSVGKQLHSWVIR--SGLALDLCVGCSLVDMYAKCAVDGSLVDSRRV 205
+ S L C + + K LH+ I S L + V +++ +Y K G + + +V
Sbjct: 15 VVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKL---GEVSLAGKV 71
Query: 206 FNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPD 265
F+ MPE N VS+ +I GY + G +A +F +M PN T S +L +CA+L D
Sbjct: 72 FDQMPERNKVSFNTIIKGYSK-YGDVDKAWGVFSEMRYFGYLPNQSTVSGLL-SCASL-D 128
Query: 266 FGFGEQLHSQTIKLGLSAVNC-VANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVD 324
G QLH ++K GL + V L+ +Y R LE A + F+ + KSL + ++
Sbjct: 129 VRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMS 188
Query: 325 VIVRDLNSDETLNHETEHT-TGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFET 383
++ E + E G ++ +L G +C+ + +Q+H K G +
Sbjct: 189 LLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDC 248
Query: 384 NLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEML 443
+S+ N+LIS Y KCGN A ++F D G ++++W +II AK KAL+LF M
Sbjct: 249 EISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMP 308
Query: 444 ETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLL 503
E G PN TY++VL S V L+ G + + M +G + ++D + G L
Sbjct: 309 EHGFSPNQGTYVSVLGVSSLVQLLSCG-RQIHGMLIKNGCETGIVLGNALIDFYAKCGNL 367
Query: 504 SEA---IEFINSMPLDADAMVWRSLL 526
++ ++I D + + W +LL
Sbjct: 368 EDSRLCFDYIR----DKNIVCWNALL 389
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 108/229 (47%), Gaps = 6/229 (2%)
Query: 244 GNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLG--LSAVNCVANSLINMYARSGRL 301
G++A + S+L C P F + LH+ +I L L V N++I++Y + G +
Sbjct: 6 GDLANHNDRVVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEV 65
Query: 302 ECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETE-HTTGIGACSFTYACLLSGA 360
A K FD + E++ VS TI+ + + D+ +E G T + LLS A
Sbjct: 66 SLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCA 125
Query: 361 ACIGTIGKGEQIHALVVKSG-FETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITW 419
+ + G Q+H L +K G F + + L+ +Y + E A QVF DM +++ TW
Sbjct: 126 SL--DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETW 183
Query: 420 TSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLID 468
++S G+ + + F E++ G + +++ VL S V +D
Sbjct: 184 NHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLD 232
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 271 bits (694), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 159/465 (34%), Positives = 259/465 (55%), Gaps = 41/465 (8%)
Query: 195 VDGSLV-DSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTF 253
+D L+ ++ +VF+ +PE +V+S TA+I +V+ S + EA + F +L + PN FTF
Sbjct: 38 IDSDLIRNAHKVFDEIPELDVISATAVIGRFVKES-RHVEASQAFKRLLCLGIRPNEFTF 96
Query: 254 SSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFE 313
+V+ + D G+QLH +K+GL++ V ++++N Y + L AR+CFD +
Sbjct: 97 GTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRD 156
Query: 314 KSLVSCETIVDVIVRDLNSDETL--------------------------NHETEHT---- 343
++VS ++ ++ +E L N E +T
Sbjct: 157 PNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDM 216
Query: 344 ---TGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKS-GFETNLSINNALISMYSKCG 399
+ T+ C ++ + I + G G+ IHA +K G N+ + N+LIS YSKCG
Sbjct: 217 LREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCG 276
Query: 400 NKEAALQVFNDMGD--RNVITWTSIISGFAKHGYATKALELFYEML-ETGVKPNDVTYIA 456
N E +L FN + + RN+++W S+I G+A +G +A+ +F +M+ +T ++PN+VT +
Sbjct: 277 NMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILG 336
Query: 457 VLSACSHVGLIDEGWKHFNSMRHCHG--VVPRVEHYACMVDVLGRSGLLSEAIEFINSMP 514
VL AC+H GLI EG+ +FN + + + +EHYACMVD+L RSG EA E I SMP
Sbjct: 337 VLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMP 396
Query: 515 LDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAA 574
LD W++LLG C++H N L + AA ILE +P D ++Y++LSN Y+ E W +V+
Sbjct: 397 LDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSL 456
Query: 575 IRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDEL 619
IR+ MK+ + + G SWIEV +Q+ F D ++ ++Y L
Sbjct: 457 IRRKMKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRML 501
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 201/427 (47%), Gaps = 52/427 (12%)
Query: 95 IESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTA 154
I +AH+VF+++ E +V++ ++ RF + ++ F R+L G P+ FT + + +
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGS 102
Query: 155 CAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRR---------- 204
+ +GKQLH + ++ GLA ++ VG ++++ Y K + +L D+RR
Sbjct: 103 STTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLS---TLTDARRCFDDTRDPNV 159
Query: 205 ---------------------VFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDML- 242
+F +MPE +VV+W A+I G+ + +G+ +EA+ F DML
Sbjct: 160 VSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQ-TGRNEEAVNTFVDMLR 218
Query: 243 QGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIK-LGLSAVNCVANSLINMYARSGRL 301
+G V PN TF + A +N+ G G+ +H+ IK LG V NSLI+ Y++ G +
Sbjct: 219 EGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNM 278
Query: 302 ECARKCFDLLFE--KSLVSCETIVDVIVRDLNSDETLN--HETEHTTGIGACSFTYACLL 357
E + F+ L E +++VS +++ + +E + + T + + T +L
Sbjct: 279 EDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVL 338
Query: 358 SGAACIGTIGKGEQIHALVVKSGFETN---LSINNALISMYSKCGNKEAALQVFNDMG-D 413
G I +G V + N L ++ M S+ G + A ++ M D
Sbjct: 339 FACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLD 398
Query: 414 RNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDV-TYIAVLSACSHVGLIDEGWK 472
+ W +++ G H A ++LE + P DV +Y+ + +A S + E W+
Sbjct: 399 PGIGFWKALLGGCQIHSNKRLAKLAASKILE--LDPRDVSSYVMLSNAYSAM----ENWQ 452
Query: 473 HFNSMRH 479
+ + +R
Sbjct: 453 NVSLIRR 459
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 158/350 (45%), Gaps = 65/350 (18%)
Query: 6 DLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVF 65
D++S +++ F S EA F +L G PNE+ F + + + S +G+ +
Sbjct: 57 DVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLH 116
Query: 66 GSVLKTGYFDSHVSVGCELIDMFVK--------GCGD----------------------I 95
LK G S+V VG +++ +VK C D
Sbjct: 117 CYALKMG-LASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEF 175
Query: 96 ESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYT-PDRFTLTSALTA 154
E A +F M ER+VVTWN ++ F+Q G E++++ F ML G P+ T A+TA
Sbjct: 176 EEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITA 235
Query: 155 CAELELLSVGKQLHSWVIR-SGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPE-- 211
+ + GK +H+ I+ G ++ V SL+ Y+KC G++ DS FN + E
Sbjct: 236 ISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKC---GNMEDSLLAFNKLEEEQ 292
Query: 212 HNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQG-NVAPNGFTFSSVLKACANLPDFGFGE 270
N+VSW ++I GY +G+ +EA+ +F M++ N+ PN T VL AC
Sbjct: 293 RNIVSWNSMIWGYAH-NGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACN--------- 342
Query: 271 QLHSQTIKLGLSAVNCVANS--------------LINMYARSGRLECARK 306
H+ I+ G N N +++M +RSGR + A +
Sbjct: 343 --HAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEE 390
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 110/228 (48%), Gaps = 12/228 (5%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFY-PNEYCFTAALRACSNSLYFSVGR 62
+R +V+W +++ F+ EA+ TF+DML G PNE F A+ A SN G+
Sbjct: 187 ERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGK 246
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQE--RNVVTWNLMMTRF 120
+ +K +V V LI + K CG++E + F K++E RN+V+WN M+ +
Sbjct: 247 SIHACAIKFLGKRFNVFVWNSLISFYSK-CGNMEDSLLAFNKLEEEQRNIVSWNSMIWGY 305
Query: 121 AQMGYPEDSIDLFFRMLL-SGYTPDRFTLTSALTACAELELLSVGKQLHSWVIR---SGL 176
A G E+++ +F +M+ + P+ T+ L AC L+ G + +
Sbjct: 306 AHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPN 365
Query: 177 ALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMP-EHNVVSWTALIAG 223
L+L +VDM ++ G ++ + SMP + + W AL+ G
Sbjct: 366 LLELEHYACMVDMLSR---SGRFKEAEELIKSMPLDPGIGFWKALLGG 410
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 153/459 (33%), Positives = 251/459 (54%), Gaps = 7/459 (1%)
Query: 166 QLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYV 225
Q+H + S L D + LV + + ++ L +R + + +W L GY
Sbjct: 31 QIHGQIHLSSLQNDSFIISELVRV-SSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGY- 88
Query: 226 RGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVN 285
S E++ ++ +M + + PN TF +LKACA+ G Q+ + +K G
Sbjct: 89 SSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDV 148
Query: 286 CVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTG 345
V N+LI++Y + ARK FD + E+++VS +I+ +V + + E G
Sbjct: 149 YVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCE-MIG 207
Query: 346 IGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAAL 405
C ++ +AC G + G+ +H+ V+ E N + AL+ MY+K G E A
Sbjct: 208 KRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYAR 267
Query: 406 QVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEML-ETGVKPNDVTYIAVLSACSHV 464
VF M D+NV TW+++I G A++G+A +AL+LF +M+ E+ V+PN VT++ VL ACSH
Sbjct: 268 LVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHT 327
Query: 465 GLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRS 524
GL+D+G+K+F+ M H + P + HY MVD+LGR+G L+EA +FI MP + DA+VWR+
Sbjct: 328 GLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRT 387
Query: 525 LLGSCRVHGNTE---LGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQ 581
LL +C +H + + +GE K ++E EP ++++N +A W + A +R+ MK+
Sbjct: 388 LLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKE 447
Query: 582 KKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELD 620
K+ K AG S +E+ H+F G + IY+ LD
Sbjct: 448 TKMKKIAGESCLELGGSFHRFFSGYDPRSEYVSIYELLD 486
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/296 (33%), Positives = 158/296 (53%), Gaps = 12/296 (4%)
Query: 9 SWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSV 68
+W + ++++ E++ + +M G PN+ F L+AC++ L + GR + V
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEV 139
Query: 69 LKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPED 128
LK G FD V VG LI ++ C A +VF++M ERNVV+WN +MT + G
Sbjct: 140 LKHG-FDFDVYVGNNLIHLY-GTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNL 197
Query: 129 SIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVD 188
+ F M+ + PD T+ L+AC LS+GK +HS V+ L L+ +G +LVD
Sbjct: 198 VFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVD 255
Query: 189 MYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDML-QGNVA 247
MYAK G L +R VF M + NV +W+A+I G + G +EA++LF M+ + +V
Sbjct: 256 MYAK---SGGLEYARLVFERMVDKNVWTWSAMIVGLAQ-YGFAEEALQLFSKMMKESSVR 311
Query: 248 PNGFTFSSVLKACAN--LPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRL 301
PN TF VL AC++ L D G+ + H + + +++++ R+GRL
Sbjct: 312 PNYVTFLGVLCACSHTGLVDDGY-KYFHEMEKIHKIKPMMIHYGAMVDILGRAGRL 366
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 110/224 (49%), Gaps = 10/224 (4%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR 62
++R++VSW S+M+ N + F +M+ F P+E L AC +L S+G+
Sbjct: 175 TERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGGNL--SLGK 232
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
+V V+ + + +G L+DM+ K G +E A VFE+M ++NV TW+ M+ AQ
Sbjct: 233 LVHSQVM-VRELELNCRLGTALVDMYAKS-GGLEYARLVFERMVDKNVWTWSAMIVGLAQ 290
Query: 123 MGYPEDSIDLFFRMLL-SGYTPDRFTLTSALTACAELELLSVG-KQLHSWVIRSGLALDL 180
G+ E+++ LF +M+ S P+ T L AC+ L+ G K H + +
Sbjct: 291 YGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMM 350
Query: 181 CVGCSLVDMYAKCAVDGSLVDSRRVFNSMP-EHNVVSWTALIAG 223
++VD+ + G L ++ MP E + V W L++
Sbjct: 351 IHYGAMVDILGRA---GRLNEAYDFIKKMPFEPDAVVWRTLLSA 391
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 176/608 (28%), Positives = 314/608 (51%), Gaps = 27/608 (4%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR 62
S RD+V++ ++S + A+ + +M+ G + F + L CS+ L+ G
Sbjct: 73 SVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREGI 132
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGC--------GDIESAHRVFEKMQERNVVTWN 114
V V+ G+ GC +MFV+ ++ A ++F++M +RN+ N
Sbjct: 133 QVHCRVISLGF-------GC---NMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCN 182
Query: 115 LMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRS 174
L++ F Q G + +++ RM L G + T + C+ L+ GKQLHS V++S
Sbjct: 183 LLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKS 242
Query: 175 GLAL-DLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQE 233
G + ++ V LVD Y+ C G L S R FN++PE +V+SW ++++ G +
Sbjct: 243 GWNISNIFVANVLVDYYSAC---GDLSGSMRSFNAVPEKDVISWNSIVS-VCADYGSVLD 298
Query: 234 AMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNC-VANSLI 292
++ LF M P+ F S L C+ D G+Q+H +K+G + V ++LI
Sbjct: 299 SLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALI 358
Query: 293 NMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVR-DLNSD--ETLNHETEHTTGIGAC 349
+MY + +E + + L +L C +++ ++ + D E + TGI
Sbjct: 359 DMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEV 418
Query: 350 SFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFN 409
+ + + ++ +H +KSG+ +++++ +LI Y+K G E + +VF+
Sbjct: 419 TLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFD 478
Query: 410 DMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDE 469
++ N+ TSII+G+A++G T +++ EM + P++VT ++VLS CSH GL++E
Sbjct: 479 ELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEE 538
Query: 470 GWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSC 529
G F+S+ +G+ P + YACMVD+LGR+GL+ +A + DAD + W SLL SC
Sbjct: 539 GELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSC 598
Query: 530 RVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAG 589
R+H N +G AA++++ EP + A YI +S Y + IR+ +++++E G
Sbjct: 599 RIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREIAASRELMREIG 658
Query: 590 YSWIEVEN 597
YS + V+N
Sbjct: 659 YSSVVVKN 666
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 209/421 (49%), Gaps = 11/421 (2%)
Query: 46 TAALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKM 105
T A CS + + + R+ F S L+ D V ID +K G++ SAH F++M
Sbjct: 15 TLAQHLCSLTPFIATPRMDFSSFLEENPSD-LVYTHNRRIDELIKS-GNLLSAHEAFDEM 72
Query: 106 QERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGK 165
R+VVT+NL+++ ++ G +I+L+ M+ G T S L+ C++ G
Sbjct: 73 SVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREGI 132
Query: 166 QLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVD-SRRVFNSMPEHNVVSWTALIAGY 224
Q+H VI G ++ V +LV +YA C LVD + ++F+ M + N+ L+ +
Sbjct: 133 QVHCRVISLGFGCNMFVRSALVGLYA-CL---RLVDVALKLFDEMLDRNLAVCNLLLRCF 188
Query: 225 VRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAV 284
+ +G+ + ++ M VA NG T+ +++ C++ G+QLHS +K G +
Sbjct: 189 CQ-TGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNIS 247
Query: 285 NC-VANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHT 343
N VAN L++ Y+ G L + + F+ + EK ++S +IV V + ++L+ ++
Sbjct: 248 NIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQ 307
Query: 344 T-GIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFE-TNLSINNALISMYSKCGNK 401
G + L+ + I G+QIH V+K GF+ ++L + +ALI MY KC
Sbjct: 308 FWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGI 367
Query: 402 EAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSAC 461
E + ++ + N+ S+++ G +E+F M++ G ++VT VL A
Sbjct: 368 ENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKAL 427
Query: 462 S 462
S
Sbjct: 428 S 428
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 52/85 (61%)
Query: 388 NNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGV 447
+N I K GN +A + F++M R+V+T+ +ISG +++G + +A+EL+ EM+ G+
Sbjct: 49 HNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGL 108
Query: 448 KPNDVTYIAVLSACSHVGLIDEGWK 472
+ + T+ +VLS CS EG +
Sbjct: 109 RESASTFPSVLSVCSDELFCREGIQ 133
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 172/537 (32%), Positives = 284/537 (52%), Gaps = 20/537 (3%)
Query: 66 GSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM-G 124
G ++K G ++S + + +L+ + K + + A ++F++M RN+VTWN+++ Q G
Sbjct: 60 GFMVKQGIYNS-LFLQNKLLQAYTK-IREFDDADKLFDEMPLRNIVTWNILIHGVIQRDG 117
Query: 125 YPEDSIDLFF----RMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDL 180
L F R+L + + D + + C + + G QLH +++ GL
Sbjct: 118 DTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSC 177
Query: 181 CVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCD 240
SLV Y KC G +V++RRVF ++ + ++V W AL++ YV +G EA L
Sbjct: 178 FPSTSLVHFYGKC---GLIVEARRVFEAVLDRDLVLWNALVSSYVL-NGMIDEAFGLLKL 233
Query: 241 MLQGNVAPNG--FTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARS 298
M G FTFSS+L AC G+Q+H+ K+ VA +L+NMYA+S
Sbjct: 234 MGSDKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQFDIPVATALLNMYAKS 289
Query: 299 GRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHT-TGIGACSFTYACLL 357
L AR+CF+ + +++VS ++ ++ E + + + T+A +L
Sbjct: 290 NHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVL 349
Query: 358 SGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVI 417
S A I + +Q+ A+V K G LS+ N+LIS YS+ GN AL F+ + + +++
Sbjct: 350 SSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLV 409
Query: 418 TWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSM 477
+WTS+I A HG+A ++L++F ML+ ++P+ +T++ VLSACSH GL+ EG + F M
Sbjct: 410 SWTSVIGALASHGFAEESLQMFESMLQK-LQPDKITFLEVLSACSHGGLVQEGLRCFKRM 468
Query: 478 RHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTEL 537
+ + EHY C++D+LGR+G + EA + +NSMP + + G C +H E
Sbjct: 469 TEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRES 528
Query: 538 GEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQK-KIIKEAGYSWI 593
+ AK +LE EP P Y +LSN Y +E W A +RK ++ K G SW+
Sbjct: 529 MKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKRERRNCYNPKTPGCSWL 585
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 142/261 (54%), Gaps = 15/261 (5%)
Query: 5 RDLVSWCSMMSCFANNSMEHEA--LVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR 62
RDLV W +++S + N M EA L+ + ++ F + + F++ L AC G+
Sbjct: 206 RDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR----IEQGK 261
Query: 63 VVFGSVLKTGY-FDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFA 121
+ + K Y FD + V L++M+ K + A FE M RNVV+WN M+ FA
Sbjct: 262 QIHAILFKVSYQFD--IPVATALLNMYAKS-NHLSDARECFESMVVRNVVSWNAMIVGFA 318
Query: 122 QMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLC 181
Q G +++ LF +MLL PD T S L++CA+ + KQ+ + V + G A L
Sbjct: 319 QNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLS 378
Query: 182 VGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDM 241
V SL+ Y++ +G+L ++ F+S+ E ++VSWT++I G + G +E++++F M
Sbjct: 379 VANSLISSYSR---NGNLSEALLCFHSIREPDLVSWTSVI-GALASHGFAEESLQMFESM 434
Query: 242 LQGNVAPNGFTFSSVLKACAN 262
LQ + P+ TF VL AC++
Sbjct: 435 LQ-KLQPDKITFLEVLSACSH 454
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 95/211 (45%), Gaps = 15/211 (7%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
R++VSW +M+ FA N EA+ F ML P+E F + L +C+ + V
Sbjct: 305 RNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQV 364
Query: 65 FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG 124
V K G D +SV LI + + G++ A F ++E ++V+W ++ A G
Sbjct: 365 QAMVTKKGSAD-FLSVANSLISSYSRN-GNLSEALLCFHSIREPDLVSWTSVIGALASHG 422
Query: 125 YPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGC 184
+ E+S+ +F M L PD+ T L+AC+ L+ G +R +
Sbjct: 423 FAEESLQMFESM-LQKLQPDKITFLEVLSACSHGGLVQEG-------LRCFKRMTEFYKI 474
Query: 185 SLVDMYAKCAVD-----GSLVDSRRVFNSMP 210
D + C +D G + ++ V NSMP
Sbjct: 475 EAEDEHYTCLIDLLGRAGFIDEASDVLNSMP 505
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 86/183 (46%), Gaps = 15/183 (8%)
Query: 360 AACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITW 419
+A + + +Q H +VK G +L + N L+ Y+K + A ++F++M RN++TW
Sbjct: 46 SASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTW 105
Query: 420 TSIISG-FAKHGYATKALELFY----EMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHF 474
+I G + G L + +L T V + V+++ ++ C+ + G +
Sbjct: 106 NILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQ-- 163
Query: 475 NSMRHCHGVVPRVEH----YACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCR 530
HC V +E +V G+ GL+ EA ++ LD D ++W +L+ S
Sbjct: 164 ---LHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAV-LDRDLVLWNALVSSYV 219
Query: 531 VHG 533
++G
Sbjct: 220 LNG 222
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 270 bits (690), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 153/497 (30%), Positives = 266/497 (53%), Gaps = 17/497 (3%)
Query: 101 VFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYT-PDRFTLTSALTACAELE 159
VFE++ WN ++ ++ +++ + RM+ +G PD +T + C+
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 160 LLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTA 219
+ VG +H V+R G D+ VG S VD Y KC L +R+VF MPE N VSWTA
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCK---DLFSARKVFGEMPERNAVSWTA 181
Query: 220 LIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKL 279
L+ YV+ SG+ +EA +F M + N+ ++++++ D ++L + K
Sbjct: 182 LVVAYVK-SGELEEAKSMFDLMPERNLG----SWNALVDGLVKSGDLVNAKKLFDEMPKR 236
Query: 280 GLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHE 339
+ + S+I+ YA+ G + AR F+ + + ++ ++ +E
Sbjct: 237 DIISYT----SMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVF 292
Query: 340 TEH-TTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVK--SGFETNLSINNALISMYS 396
+E + F L+S + +G E++ + + + + F ++ + ALI M +
Sbjct: 293 SEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVP-ALIDMNA 351
Query: 397 KCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIA 456
KCG+ + A ++F +M R+++++ S++ G A HG ++A+ LF +M++ G+ P++V +
Sbjct: 352 KCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTV 411
Query: 457 VLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLD 516
+L C L++EG ++F MR + ++ +HY+C+V++L R+G L EA E I SMP +
Sbjct: 412 ILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFE 471
Query: 517 ADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIR 576
A A W SLLG C +HGNTE+ E A+ + E EP +Y+LLSN+YA +RW DVA +R
Sbjct: 472 AHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLR 531
Query: 577 KTMKQKKIIKEAGYSWI 593
M + I K G SWI
Sbjct: 532 DKMNENGITKICGRSWI 548
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 113/434 (26%), Positives = 200/434 (46%), Gaps = 35/434 (8%)
Query: 10 WCSMMSCFANNSMEHEALVTFLDMLEHGF-YPNEYCFTAALRACSNSLYFSVGRVVFGSV 68
W ++ ++N + E + + M+ G P+EY F ++ CSN+ VG V G V
Sbjct: 77 WNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLV 136
Query: 69 LKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPED 128
L+ G FD V VG +D + K C D+ SA +VF +M ERN V+W ++ + + G E+
Sbjct: 137 LRIG-FDKDVVVGTSFVDFYGK-CKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEE 194
Query: 129 SIDLFFRMLLSGYTPDR-----FTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVG 183
+ +F M P+R L L +L++ K R D+
Sbjct: 195 AKSMFDLM------PERNLGSWNALVDGLVKSG--DLVNAKKLFDEMPKR-----DIISY 241
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQ 243
S++D YAK G +V +R +F +V +W+ALI GY + +GQ EA ++F +M
Sbjct: 242 TSMIDGYAK---GGDMVSARDLFEEARGVDVRAWSALILGYAQ-NGQPNEAFKVFSEMCA 297
Query: 244 GNVAPNGFTFSSVLKACANLPDFGFGEQ----LHSQTIKLGLSAVNCVANSLINMYARSG 299
NV P+ F ++ AC+ + F E+ LH + K + + V +LI+M A+ G
Sbjct: 298 KNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKF---SSHYVVPALIDMNAKCG 354
Query: 300 RLECARKCFDLLFEKSLVS-CETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLS 358
++ A K F+ + ++ LVS C + + + S+ E GI + +L
Sbjct: 355 HMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILK 414
Query: 359 GAACIGTIGKGEQIHALVVKS-GFETNLSINNALISMYSKCGNKEAALQVFNDMG-DRNV 416
+ +G + L+ K + + ++++ S+ G + A ++ M + +
Sbjct: 415 VCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHA 474
Query: 417 ITWTSIISGFAKHG 430
W S++ G + HG
Sbjct: 475 SAWGSLLGGCSLHG 488
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 107/222 (48%), Gaps = 10/222 (4%)
Query: 6 DLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVF 65
D+ +W +++ +A N +EA F +M P+E+ + ACS F + V
Sbjct: 268 DVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVD 327
Query: 66 GSV-LKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG 124
+ + F SH V LIDM K CG ++ A ++FE+M +R++V++ MM A G
Sbjct: 328 SYLHQRMNKFSSHYVVPA-LIDMNAK-CGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHG 385
Query: 125 YPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIR--SGLALDLCV 182
++I LF +M+ G PD T L C + L+ G + + + S LA
Sbjct: 386 CGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHY 445
Query: 183 GCSLVDMYAKCAVDGSLVDSRRVFNSMP-EHNVVSWTALIAG 223
C +V++ ++ G L ++ + SMP E + +W +L+ G
Sbjct: 446 SC-IVNLLSRT---GKLKEAYELIKSMPFEAHASAWGSLLGG 483
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 268 bits (685), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 149/536 (27%), Positives = 283/536 (52%), Gaps = 6/536 (1%)
Query: 93 GDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSAL 152
G+I A +VF+++ +R V +N M+ +++ P++ + L+ +M+ PD T T +
Sbjct: 64 GEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTI 123
Query: 153 TACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH 212
AC +L G+ + + G D+ V S++++Y KC G + ++ +F M +
Sbjct: 124 KACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKC---GKMDEAEVLFGKMAKR 180
Query: 213 NVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQL 272
+V+ WT ++ G+ + +G+ +A+ + +M + +L+A +L D G +
Sbjct: 181 DVICWTTMVTGFAQ-AGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSV 239
Query: 273 HSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNS 332
H + GL V SL++MYA+ G +E A + F + K+ VS +++ ++ +
Sbjct: 240 HGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLA 299
Query: 333 DETLNHETE-HTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNAL 391
++ E + G T +L + +G++ G +H ++K ++ AL
Sbjct: 300 NKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVTAT-AL 358
Query: 392 ISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPND 451
+ MYSKCG ++ ++F +G ++++ W ++IS + HG + + LF +M E+ ++P+
Sbjct: 359 MDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDH 418
Query: 452 VTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFIN 511
T+ ++LSA SH GL+++G F+ M + + + P +HY C++D+L R+G + EA++ IN
Sbjct: 419 ATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMIN 478
Query: 512 SMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYD 571
S LD +W +LL C H N +G+ AA IL+ P L+SN +AT +W +
Sbjct: 479 SEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKE 538
Query: 572 VAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELDELASKIK 627
VA +RK M+ + K GYS IEV ++ F + D SH + + L L ++I+
Sbjct: 539 VAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLRNLKTEIR 594
Score = 156 bits (395), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 114/429 (26%), Positives = 209/429 (48%), Gaps = 10/429 (2%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
+R + + SM+ ++ E L + M+ P+ FT ++AC + L G
Sbjct: 78 QRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEA 137
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
V+ + GY + V V ++++++K CG ++ A +F KM +R+V+ W M+T FAQ
Sbjct: 138 VWCKAVDFGY-KNDVFVCSSVLNLYMK-CGKMDEAEVLFGKMAKRDVICWTTMVTGFAQA 195
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVG 183
G +++ + M G+ DR + L A +L +G+ +H ++ R+GL +++ V
Sbjct: 196 GKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVE 255
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQ 243
SLVDMYAK G + + RVF+ M VSW +LI+G+ + +G +A +M
Sbjct: 256 TSLVDMYAKV---GFIEVASRVFSRMMFKTAVSWGSLISGFAQ-NGLANKAFEAVVEMQS 311
Query: 244 GNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLEC 303
P+ T VL AC+ + G +H +K + A +L++MY++ G L
Sbjct: 312 LGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLD-RVTATALMDMYSKCGALSS 370
Query: 304 ARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHT-TGIGACSFTYACLLSGAAC 362
+R+ F+ + K LV T++ N E ++ + T + I T+A LLS +
Sbjct: 371 SREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSH 430
Query: 363 IGTIGKGEQIHALVV-KSGFETNLSINNALISMYSKCGNKEAALQVFN-DMGDRNVITWT 420
G + +G+ ++++ K + + LI + ++ G E AL + N + D + W
Sbjct: 431 SGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWV 490
Query: 421 SIISGFAKH 429
+++SG H
Sbjct: 491 ALLSGCINH 499
Score = 142 bits (358), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 96/306 (31%), Positives = 161/306 (52%), Gaps = 14/306 (4%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR 62
+KRD++ W +M++ FA +A+ + +M GF + L+A + +GR
Sbjct: 178 AKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGR 237
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
V G + +TG +V V L+DM+ K G IE A RVF +M + V+W +++ FAQ
Sbjct: 238 SVHGYLYRTG-LPMNVVVETSLVDMYAK-VGFIEVASRVFSRMMFKTAVSWGSLISGFAQ 295
Query: 123 MGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCV 182
G + + M G+ PD TL L AC+++ L G+ +H ++++ + LD
Sbjct: 296 NGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHV-LDRVT 354
Query: 183 GCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGY-VRGSGQEQEAMRLFCDM 241
+L+DMY+KC G+L SR +F + ++V W +I+ Y + G+G QE + LF M
Sbjct: 355 ATALMDMYSKC---GALSSSREIFEHVGRKDLVCWNTMISCYGIHGNG--QEVVSLFLKM 409
Query: 242 LQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTI---KLGLSAVNCVANSLINMYARS 298
+ N+ P+ TF+S+L A ++ G+ S I K+ S + V LI++ AR+
Sbjct: 410 TESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVC--LIDLLARA 467
Query: 299 GRLECA 304
GR+E A
Sbjct: 468 GRVEEA 473
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 179/598 (29%), Positives = 292/598 (48%), Gaps = 34/598 (5%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLE-HGFYPNEYCFTAALRACSNSLYFSVGRV 63
RD++S ++++ FA N M EA M P+ + C + + GR
Sbjct: 355 RDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRA 414
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
V G ++ + V +IDM+ K CG A +F+ R++V+WN M++ F+Q
Sbjct: 415 VHGYTVRMEMQSRALEVINSVIDMYGK-CGLTTQAELLFKTTTHRDLVSWNSMISAFSQN 473
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSAL---TACAELELLSVGKQLHSWVIRSGLALDL 180
G+ + +LF + ++S Y+ +F+L++ L T+C + L GK +H W+ + G
Sbjct: 474 GFTHKAKNLF-KEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLG----- 527
Query: 181 CVGCSLVDMYAKCAVDGSLVDSRRVFNSMPE-HNVVSWTALIAGYVRGSGQEQEAMRLFC 239
L + +M E ++ SW ++I+G SG E++R F
Sbjct: 528 -----------------DLTSAFLRLETMSETRDLTSWNSVISG-CASSGHHLESLRAFQ 569
Query: 240 DM-LQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARS 298
M +G + + T + A NL G H IK + N+LI MY R
Sbjct: 570 AMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRC 629
Query: 299 GRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLS 358
+E A K F L+ + +L S ++ + ++ E + + T+ LLS
Sbjct: 630 KDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVF--QLFRNLKLEPNEITFVGLLS 687
Query: 359 GAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVIT 418
+ +G+ G Q H +++ GF+ N ++ AL+ MYS CG E ++VF + G ++
Sbjct: 688 ASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISA 747
Query: 419 WTSIISGFAKHGYATKALELFYEMLETG-VKPNDVTYIAVLSACSHVGLIDEGWKHFNSM 477
W S+IS HG KA+ELF E+ ++PN ++I++LSACSH G IDEG ++ M
Sbjct: 748 WNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQM 807
Query: 478 RHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTEL 537
GV P EH +VD+LGR+G L EA EFI + A VW +LL +C HG+T+L
Sbjct: 808 EEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKL 867
Query: 538 GEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEV 595
G+ A+++ E EP + + YI L+N Y W + +RK ++ + K GYS I+V
Sbjct: 868 GKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVIDV 925
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 150/660 (22%), Positives = 291/660 (44%), Gaps = 82/660 (12%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR- 62
++D++ W SM++ N A+ F++M+ G NE+ T L A S + R
Sbjct: 150 EKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKG---NEFDSTTLLLAASALSSLHLSRK 206
Query: 63 --VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRF 120
++ ++TG S+ L++++ KG ++ SA VF M+ R++V+WN +MT+
Sbjct: 207 CSMLHCLAIETGLVGDS-SLCNALMNLYAKG-ENLSSAECVFTHMEHRDIVSWNTIMTKC 264
Query: 121 AQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALD- 179
G+P S+ F M SG D T + ++AC+ +E L++G+ LH VI+SG + +
Sbjct: 265 LANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEA 324
Query: 180 -LCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLF 238
+ VG S++ MY+KC G + VF + +V+S A++ G+ +G +EA +
Sbjct: 325 HVSVGNSIISMYSKC---GDTEAAETVFEELVCRDVISSNAILNGFA-ANGMFEEAFGIL 380
Query: 239 CDMLQ-GNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNC-VANSLINMYA 296
M + P+ T S+ C +L G +H T+++ + + V NS+I+MY
Sbjct: 381 NQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYG 440
Query: 297 RSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACL 356
+ G A F + LVS +++ ++ + + N E + F+ + +
Sbjct: 441 KCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTV 500
Query: 357 LSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGD-RN 415
L A++ +L ++ K G+ +A M + R+
Sbjct: 501 L----------------AILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRD 544
Query: 416 VITWTSIISGFAKHGYATKALELFYEMLETG-VKPNDVTYIAVLSACSHVGLIDEGW--- 471
+ +W S+ISG A G+ ++L F M G ++ + +T + +SA ++GL+ +G
Sbjct: 545 LTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFH 604
Query: 472 -------------------------KHFNSMRHCHGVV--PRVEHYACMVDVLGRSGLLS 504
K S G++ P + + C++ L ++
Sbjct: 605 GLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGR 664
Query: 505 EAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILERE-PHDPATYILLSNLY 563
E + ++ L+ + + + LL + G+T G A ++ R +P L ++Y
Sbjct: 665 EVFQLFRNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMY 724
Query: 564 ATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQV---HKFH-VGDTSHPQAQKIYDEL 619
++ + M K+ + +G + I N V H FH +G+ +A +++ EL
Sbjct: 725 SS------CGMLETGM---KVFRNSGVNSISAWNSVISAHGFHGMGE----KAMELFKEL 771
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 213/455 (46%), Gaps = 33/455 (7%)
Query: 88 FVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFT 147
F G++ S+ +F++++E++V+ WN M+T Q G ++ LF M+ G D T
Sbjct: 131 FYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTT 190
Query: 148 LTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFN 207
L A +A + L L LH I +GL D + +L+++YAK +L + VF
Sbjct: 191 LLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAK---GENLSSAECVFT 247
Query: 208 SMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFG 267
M ++VSW ++ + +G +++++ F M + TFS V+ AC+++ +
Sbjct: 248 HMEHRDIVSWNTIMTKCL-ANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELT 306
Query: 268 FGEQLHSQTIKLGLS--AVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDV 325
GE LH IK G S A V NS+I+MY++ G E A F+ L + ++S I++
Sbjct: 307 LGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNG 366
Query: 326 IVRDLNSDETLN--HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFET 383
+ +E ++ + I T + S + +G +H V+ ++
Sbjct: 367 FAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQS 426
Query: 384 N-LSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEM 442
L + N++I MY KCG A +F R++++W S+IS F+++G+ KA LF E+
Sbjct: 427 RALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEV 486
Query: 443 LE--TGVKPNDVTYIAVLSAC-SHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGR 499
+ + K + T +A+L++C S LI F HC L +
Sbjct: 487 VSEYSCSKFSLSTVLAILTSCDSSDSLI------FGKSVHCW---------------LQK 525
Query: 500 SGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGN 534
G L+ A + +M D W S++ C G+
Sbjct: 526 LGDLTSAFLRLETMSETRDLTSWNSVISGCASSGH 560
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 144/307 (46%), Gaps = 12/307 (3%)
Query: 1 MGSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEY-CFTAALRACSNSLYFS 59
M RDL SW S++S A++ E+L F M G ++ + A N
Sbjct: 539 MSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVL 598
Query: 60 VGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTR 119
GR G +K+ + + LI M+ + C DIESA +VF + + N+ +WN +++
Sbjct: 599 QGRCFHGLAIKS-LRELDTQLQNTLITMYGR-CKDIESAVKVFGLISDPNLCSWNCVISA 656
Query: 120 FAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALD 179
+Q + LF + L P+ T L+A +L S G Q H +IR G +
Sbjct: 657 LSQNKAGREVFQLFRNLKLE---PNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQAN 713
Query: 180 LCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFC 239
V +LVDMY+ C G L +VF + +++ +W ++I+ + G ++AM LF
Sbjct: 714 PFVSAALVDMYSSC---GMLETGMKVFRNSGVNSISAWNSVISAH-GFHGMGEKAMELFK 769
Query: 240 DMLQGN-VAPNGFTFSSVLKACANLPDFGFGEQLHSQT-IKLGLSAVNCVANSLINMYAR 297
++ + + PN +F S+L AC++ G + Q K G+ V +++M R
Sbjct: 770 ELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGR 829
Query: 298 SGRLECA 304
+G+L A
Sbjct: 830 AGKLREA 836
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 272 LHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLN 331
+H +K GL ++ L+ Y R+G L + FD L EK ++ +++
Sbjct: 109 VHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITA------ 162
Query: 332 SDETLNHETEHTTGIGAC-----------SFTYACLLSGAACIGTIGKGEQIHALVVKSG 380
LN + +G S T S + + K +H L +++G
Sbjct: 163 ----LNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETG 218
Query: 381 FETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFY 440
+ S+ NAL+++Y+K N +A VF M R++++W +I++ +G+ K+L+ F
Sbjct: 219 LVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFK 278
Query: 441 EMLETGVKPNDVTYIAVLSACSHV 464
M +G + + VT+ V+SACS +
Sbjct: 279 SMTGSGQEADTVTFSCVISACSSI 302
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 212/694 (30%), Positives = 333/694 (47%), Gaps = 108/694 (15%)
Query: 2 GSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVG 61
GS +V W S++S +A EA V F M E T ++ + +++
Sbjct: 72 GSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLF 131
Query: 62 R-----VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLM 116
R VV +V+ T D G E A +F++M ERNVV+WN +
Sbjct: 132 REMPKNVVSWTVMLTALCDD----------------GRSEDAVELFDEMPERNVVSWNTL 175
Query: 117 MTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGL 176
+T + G E + +F M + D + + + E + + K L +
Sbjct: 176 VTGLIRNGDMEKAKQVFDAM----PSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEK-- 229
Query: 177 ALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMR 236
++ S+V Y C G + ++ R+F MPE N+VSWTA+I+G+ +EA+
Sbjct: 230 --NVVTWTSMV--YGYCRY-GDVREAYRLFCEMPERNIVSWTAMISGFAWNE-LYREALM 283
Query: 237 LFCDMLQG--NVAPNGFTFSSVLKACANLP-DFG-FGEQLHSQTIKLGLSAVN---CVAN 289
LF +M + V+PNG T S+ AC L +F GEQLH+Q I G V+ +A
Sbjct: 284 LFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAK 343
Query: 290 SLINMYARSGRLECAR----KCFDL---------------------LFE--KSL---VSC 319
SL++MYA SG + A+ + FDL LFE KSL VS
Sbjct: 344 SLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSW 403
Query: 320 ETIVD---------------------------VIVRDLNSDETLNHETEHTTGIGACSF- 351
+++D V++ L +E + + C
Sbjct: 404 TSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLK 463
Query: 352 ----TYACLLSGAACIGTIGKGEQIHALVVKSG--FETNLSINNALISMYSKCGNKEAAL 405
TY+ LLS A + +G+ IH ++ K+ ++ +L + N+L+SMY+KCG E A
Sbjct: 464 PLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAY 523
Query: 406 QVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVG 465
++F M ++ ++W S+I G + HG A KAL LF EML++G KPN VT++ VLSACSH G
Sbjct: 524 EIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSG 583
Query: 466 LIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSL 525
LI G + F +M+ + + P ++HY M+D+LGR+G L EA EFI+++P D V+ +L
Sbjct: 584 LITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGAL 643
Query: 526 LGSCRVHGNTE----LGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQ 581
LG C ++ + + E AA +LE +P + ++ L N+YA R +RK M
Sbjct: 644 LGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGI 703
Query: 582 KKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKI 615
K + K G SW+ V + + F GD S +A ++
Sbjct: 704 KGVKKTPGCSWVVVNGRANVFLSGDKSASEAAQM 737
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 163/525 (31%), Positives = 277/525 (52%), Gaps = 42/525 (8%)
Query: 113 WNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVI 172
WN ++ + P ++ L ML +G + D+F+L+ L AC+ L + G Q+H ++
Sbjct: 89 WNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLK 148
Query: 173 RSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQ 232
++GL DL + L+ +Y KC G L SR++F+ MP+ + VS+ ++I GYV+ G
Sbjct: 149 KTGLWSDLFLQNCLIGLYLKC---GCLGLSRQMFDRMPKRDSVSYNSMIDGYVK-CGLIV 204
Query: 233 EAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLI 292
A LF D++ + N +++S++ A D G + S+ NS+I
Sbjct: 205 SARELF-DLMPMEMK-NLISWNSMISGYAQTSD---GVDIASKLFADMPEKDLISWNSMI 259
Query: 293 NMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVR--DLNSDETLNHETEHTTGIGACS 350
+ Y + GR+E A+ FD++ + +V+ T++D + ++ +TL + H + S
Sbjct: 260 DGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNS 319
Query: 351 F-------------------------------TYACLLSGAACIGTIGKGEQIHALVVKS 379
T +L A +G + K +H +V+
Sbjct: 320 MMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEK 379
Query: 380 GFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELF 439
F + ALI MYSKCG+ + A+ VF + ++++ W ++I G A HG A ++
Sbjct: 380 QFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDML 439
Query: 440 YEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGR 499
++ +KP+D+T++ VL+ACSH GL+ EG F MR H + PR++HY CMVD+L R
Sbjct: 440 LQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSR 499
Query: 500 SGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILL 559
SG + A I MP++ + ++WR+ L +C H E GE AK ++ + ++P++Y+LL
Sbjct: 500 SGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLL 559
Query: 560 SNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHV 604
SN+YA+ W DV +R MK++KI K G SWIE++ +VH+F V
Sbjct: 560 SNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFFV 604
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 116/518 (22%), Positives = 231/518 (44%), Gaps = 63/518 (12%)
Query: 2 GSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVG 61
G D W +++ ++ +AL+ MLE+G +++ + L+ACS + G
Sbjct: 81 GEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGG 140
Query: 62 RVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFA 121
+ G + KTG + C LI +++K CG + + ++F++M +R+ V++N M+ +
Sbjct: 141 MQIHGFLKKTGLWSDLFLQNC-LIGLYLK-CGCLGLSRQMFDRMPKRDSVSYNSMIDGYV 198
Query: 122 QMGYPEDSIDLFFRM------------LLSGY--TPDRFTLTSALTA-CAELELLSVGKQ 166
+ G + +LF M ++SGY T D + S L A E +L+S
Sbjct: 199 KCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSM 258
Query: 167 LHSWV----IRSGLAL-------DLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVV 215
+ +V I L D+ +++D YAK G + ++ +F+ MP +VV
Sbjct: 259 IDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKL---GFVHHAKTLFDQMPHRDVV 315
Query: 216 SWTALIAGYVRGSGQEQEAMRLFCDM-LQGNVAPNGFTFSSVLKACANLPDFGFGEQLHS 274
++ +++AGYV+ EA+ +F DM + ++ P+ T VL A A L +H
Sbjct: 316 AYNSMMAGYVQNK-YHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHL 374
Query: 275 QTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIV-DVIVRDLNSD 333
++ + +LI+MY++ G ++ A F+ + KS+ ++ + + L
Sbjct: 375 YIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGES 434
Query: 334 --------ETLNHETEHTTGIG---ACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFE 382
E L+ + + T +G ACS + + G C + + +I E
Sbjct: 435 AFDMLLQIERLSLKPDDITFVGVLNACSHS-GLVKEGLLCFELMRRKHKI---------E 484
Query: 383 TNLSINNALISMYSKCGNKEAALQVFNDMG-DRNVITWTSIISGFAKHG-YATKALELFY 440
L ++ + S+ G+ E A + +M + N + W + ++ + H + T L +
Sbjct: 485 PRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKH 544
Query: 441 EMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMR 478
+L+ G P+ +Y+ + + + G+ WK +R
Sbjct: 545 LILQAGYNPS--SYVLLSNMYASFGM----WKDVRRVR 576
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 265 bits (678), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 162/498 (32%), Positives = 261/498 (52%), Gaps = 43/498 (8%)
Query: 165 KQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGY 224
KQLH+ +R+G+ D+ + + +LV +R++F+ + LI Y
Sbjct: 5 KQLHAHCLRTGVD-------ETKDLLQRLLLIPNLVYARKLFDHHQNSCTFLYNKLIQAY 57
Query: 225 VRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAV 284
Q E++ L+ + + P+ TF+ + A A+ LHSQ + G +
Sbjct: 58 YVHH-QPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESD 116
Query: 285 NCVANSLINMYARSGRLECARKCFDL---------------------------LFE---- 313
+ +LI YA+ G L CAR+ FD LF+
Sbjct: 117 SFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPR 176
Query: 314 KSLVSCETIVDVIVRDLNSDETLNHE--TEHTTGIGACSFTYACLLSGAACIGTIGKGEQ 371
K++ S T++ ++ N E L E + T +L A +G + G +
Sbjct: 177 KNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRR 236
Query: 372 IHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGD-RNVITWTSIISGFAKHG 430
+ ++GF N+ + NA I MYSKCG + A ++F ++G+ RN+ +W S+I A HG
Sbjct: 237 LEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHG 296
Query: 431 YATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHY 490
+AL LF +ML G KP+ VT++ +L AC H G++ +G + F SM H + P++EHY
Sbjct: 297 KHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHY 356
Query: 491 ACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREP 550
CM+D+LGR G L EA + I +MP+ DA+VW +LLG+C HGN E+ E A++ + + EP
Sbjct: 357 GCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEP 416
Query: 551 HDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSW-IEVENQVHKFHVGDTSH 609
+P +++SN+YA E+W V +RK MK++ + K AGYS+ +EV VHKF V D SH
Sbjct: 417 TNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSH 476
Query: 610 PQAQKIYDELDELASKIK 627
P++ +IY L+E+ ++K
Sbjct: 477 PRSYEIYQVLEEIFRRMK 494
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 136/282 (48%), Gaps = 24/282 (8%)
Query: 37 GFYPNEYCFTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIE 96
GF + +C T + A + R VF + K V V +I + + GD++
Sbjct: 112 GFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRD-----VPVWNAMITGYQRR-GDMK 165
Query: 97 SAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLL-SGYTPDRFTLTSALTAC 155
+A +F+ M +NV +W +++ F+Q G +++ +F M P+ T+ S L AC
Sbjct: 166 AAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPAC 225
Query: 156 AELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSM-PEHNV 214
A L L +G++L + +G ++ V + ++MY+KC G + ++R+F + + N+
Sbjct: 226 ANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKC---GMIDVAKRLFEELGNQRNL 282
Query: 215 VSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHS 274
SW ++I G + G+ EA+ LF ML+ P+ TF +L AC + G++L
Sbjct: 283 CSWNSMI-GSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFK 341
Query: 275 -----QTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLL 311
I L C +I++ R G+L+ A +DL+
Sbjct: 342 SMEEVHKISPKLEHYGC----MIDLLGRVGKLQEA---YDLI 376
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 151/375 (40%), Gaps = 52/375 (13%)
Query: 98 AHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAE 157
A ++F+ Q +N ++ + P +SI L+ + G P T A A
Sbjct: 35 ARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASAS 94
Query: 158 LELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRV------------ 205
+ LHS RSG D +L+ YAK G+L +RRV
Sbjct: 95 FSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKL---GALCCARRVFDEMSKRDVPVW 151
Query: 206 -------------------FNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLF-CDMLQGN 245
F+SMP NV SWT +I+G+ + +G EA+++F C +
Sbjct: 152 NAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQ-NGNYSEALKMFLCMEKDKS 210
Query: 246 VAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECAR 305
V PN T SVL ACANL + G +L + G V N+ I MY++ G ++ A+
Sbjct: 211 VKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAK 270
Query: 306 KCFDLL-FEKSLVSCETIVDVIVRDLNSDETLN------HETEHTTGIGACSFTYACLLS 358
+ F+ L +++L S +++ + DE L E E + AC+
Sbjct: 271 RLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHG 330
Query: 359 GAACIGT--IGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDR-N 415
G G E++H + K L +I + + G + A + M + +
Sbjct: 331 GMVVKGQELFKSMEEVHKISPK------LEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPD 384
Query: 416 VITWTSIISGFAKHG 430
+ W +++ + HG
Sbjct: 385 AVVWGTLLGACSFHG 399
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 115/226 (50%), Gaps = 13/226 (5%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDM-LEHGFYPNEYCFTAALRACSNSLYFSVGR 62
++++ SW +++S F+ N EAL FL M + PN + L AC+N +GR
Sbjct: 176 RKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGR 235
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKM-QERNVVTWNLMMTRFA 121
+ G + G+FD+ + V I+M+ K CG I+ A R+FE++ +RN+ +WN M+ A
Sbjct: 236 RLEGYARENGFFDN-IYVCNATIEMYSK-CGMIDVAKRLFEELGNQRNLCSWNSMIGSLA 293
Query: 122 QMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHS---WVIRSGLAL 178
G ++++ LF +ML G PD T L AC ++ G++L V + L
Sbjct: 294 THGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKL 353
Query: 179 DLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMP-EHNVVSWTALIAG 223
+ GC ++D+ + G L ++ + +MP + + V W L+
Sbjct: 354 EH-YGC-MIDLLGRV---GKLQEAYDLIKTMPMKPDAVVWGTLLGA 394
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 265 bits (678), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 133/384 (34%), Positives = 224/384 (58%), Gaps = 1/384 (0%)
Query: 252 TFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLL 311
T++ +L+ C ++ G+++H+Q +G + + L+ +YA SG L+ A F L
Sbjct: 110 TYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSL 169
Query: 312 FEKSLVSCETIVDVIV-RDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGE 370
+ L+ ++ V + L + + I +T+A + + + + G+
Sbjct: 170 KIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGK 229
Query: 371 QIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHG 430
+ HA+++K ++N+ +++AL+ MY KC + +VF+ + RNVITWTS+ISG+ HG
Sbjct: 230 RAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHG 289
Query: 431 YATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHY 490
++ L+ F +M E G +PN VT++ VL+AC+H GL+D+GW+HF SM+ +G+ P +HY
Sbjct: 290 KVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHY 349
Query: 491 ACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREP 550
A MVD LGR+G L EA EF+ P VW SLLG+CR+HGN +L E AA LE +P
Sbjct: 350 AAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDP 409
Query: 551 HDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHP 610
+ Y++ +N YA+ + +R+ M+ + K+ GYS IE++ +VH+F DTSH
Sbjct: 410 TNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGEVHRFMKDDTSHR 469
Query: 611 QAQKIYDELDELASKIKKLGYVPN 634
++KIY ++ E+ S + Y P+
Sbjct: 470 LSEKIYKKVHEMTSFFMDIDYYPD 493
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 139/263 (52%), Gaps = 11/263 (4%)
Query: 45 FTAALRACSNSLYFSVGRVVFGSVLKTGY-FDSHVSVGCELIDMFVKGCGDIESAHRVFE 103
+ L+ C ++ G+ + + G+ + ++ V +L+ ++ GD+++A +F
Sbjct: 111 YAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKV--KLLILYALS-GDLQTAGILFR 167
Query: 104 KMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSV 163
++ R+++ WN M++ + Q G ++ + +++ M + PD++T S AC+ L+ L
Sbjct: 168 SLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEH 227
Query: 164 GKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAG 223
GK+ H+ +I+ + ++ V +LVDMY KC+ S D RVF+ + NV++WT+LI+G
Sbjct: 228 GKRAHAVMIKRCIKSNIIVDSALVDMYFKCS---SFSDGHRVFDQLSTRNVITWTSLISG 284
Query: 224 YVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKAC--ANLPDFGFGEQLHSQTIKLGL 281
Y G+ E ++ F M + PN TF VL AC L D G+ E +S G+
Sbjct: 285 YGY-HGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGW-EHFYSMKRDYGI 342
Query: 282 SAVNCVANSLINMYARSGRLECA 304
++++ R+GRL+ A
Sbjct: 343 EPEGQHYAAMVDTLGRAGRLQEA 365
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 141/310 (45%), Gaps = 14/310 (4%)
Query: 139 SGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGS 198
SG + T L C + + + GK++H+ + G AL+ + L+ +YA + G
Sbjct: 102 SGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYA---LSGD 158
Query: 199 LVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLK 258
L + +F S+ +++ W A+I+GYV+ G EQE + ++ DM Q + P+ +TF+SV +
Sbjct: 159 LQTAGILFRSLKIRDLIPWNAMISGYVQ-KGLEQEGLFIYYDMRQNRIVPDQYTFASVFR 217
Query: 259 ACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVS 318
AC+ L G++ H+ IK + + V ++L++MY + + FD L +++++
Sbjct: 218 ACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVIT 277
Query: 319 CETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGAACIGTIGKG-EQIHALV 376
+++ E L E G T+ +L+ G + KG E +++
Sbjct: 278 WTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMK 337
Query: 377 VKSGFETNLSINNALISMYSKCGNKEAALQ-VFNDMGDRNVITWTSIISGFAKHG----- 430
G E A++ + G + A + V + W S++ HG
Sbjct: 338 RDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLL 397
Query: 431 --YATKALEL 438
ATK LEL
Sbjct: 398 ELAATKFLEL 407
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 79/160 (49%), Gaps = 2/160 (1%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
RDL+ W +M+S + +E E L + DM ++ P++Y F + RACS G+
Sbjct: 172 RDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRA 231
Query: 65 FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG 124
++K S++ V L+DM+ K C HRVF+++ RNV+TW +++ + G
Sbjct: 232 HAVMIKRC-IKSNIIVDSALVDMYFK-CSSFSDGHRVFDQLSTRNVITWTSLISGYGYHG 289
Query: 125 YPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVG 164
+ + F +M G P+ T LTAC L+ G
Sbjct: 290 KVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKG 329
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 265 bits (676), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 156/502 (31%), Positives = 277/502 (55%), Gaps = 17/502 (3%)
Query: 98 AHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAE 157
A +F+++ +R++ + N ++ + G P D++ LF ++ + T T L AC+
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSL 96
Query: 158 LELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSW 217
L G+Q+H+ +I+ G +L+DMY+K G LVDS RVF S+ E ++VSW
Sbjct: 97 LSYPETGRQVHALMIKQGAETGTISKTALIDMYSKY---GHLVDSVRVFESVEEKDLVSW 153
Query: 218 TALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTI 277
AL++G++R +G+ +EA+ +F M + V + FT SSV+K CA+L G+Q+H+ +
Sbjct: 154 NALLSGFLR-NGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVV 212
Query: 278 KLGLSAVNCVANSLINMYARSGRLECARKCFDLL-FEKSLVSCETIVDVIVRDLNSDETL 336
G V + ++I+ Y+ G + A K ++ L V +++ +R+ N E
Sbjct: 213 VTGRDLV-VLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAF 271
Query: 337 NHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYS 396
+ + S + L+G + + G+QIH + +++GF ++ + N L+ MY
Sbjct: 272 LLMSRQRPNVRVLSSS----LAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYG 327
Query: 397 KCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLE--TGVKPNDVTY 454
KCG A +F + ++V++WTS+I +A +G KALE+F EM E +GV PN VT+
Sbjct: 328 KCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTF 387
Query: 455 IAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMP 514
+ V+SAC+H GL+ EG + F M+ + +VP EHY C +D+L ++G E + M
Sbjct: 388 LVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMM 447
Query: 515 LDADA----MVWRSLLGSCRVHGNTELGEHAAKMILERE-PHDPATYILLSNLYATEERW 569
+ + +W ++L +C ++ + GE+ A+ ++E P + + Y+L+SN YA +W
Sbjct: 448 ENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKW 507
Query: 570 YDVAAIRKTMKQKKIIKEAGYS 591
V +R +K K ++K AG+S
Sbjct: 508 DVVEELRGKLKNKGLVKTAGHS 529
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 115/447 (25%), Positives = 213/447 (47%), Gaps = 28/447 (6%)
Query: 24 HEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCE 83
++ L FL + + + FT L ACS Y GR V ++K G +S
Sbjct: 66 NDTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTIS-KTA 124
Query: 84 LIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTP 143
LIDM+ K G + + RVFE ++E+++V+WN +++ F + G ++++ +F M
Sbjct: 125 LIDMYSK-YGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEI 183
Query: 144 DRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSR 203
FTL+S + CA L++L GKQ+H+ V+ +G L + +G +++ Y+ G + ++
Sbjct: 184 SEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDL-VVLGTAMISFYSSV---GLINEAM 239
Query: 204 RVFNSMPEH-NVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACAN 262
+V+NS+ H + V +LI+G +R +EA +L PN SS L C++
Sbjct: 240 KVYNSLNVHTDEVMLNSLISGCIRNRNY-KEAF-----LLMSRQRPNVRVLSSSLAGCSD 293
Query: 263 LPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETI 322
D G+Q+H ++ G + + + N L++MY + G++ AR F + KS+VS ++
Sbjct: 294 NSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSM 353
Query: 323 VDVIVRDLNSD-----ETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVV 377
+D +N D E E +G+ S T+ ++S A G + +G++ + +
Sbjct: 354 IDAYA--VNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGM-M 410
Query: 378 KSGFETNLSINN--ALISMYSKCGNKEAALQVFNDM--GDRNVI---TWTSIISGFAKHG 430
K + + I + SK G E ++ M D I W +++S + +
Sbjct: 411 KEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNM 470
Query: 431 YATKALELFYEMLETGVKPNDVTYIAV 457
T+ + ++E N Y+ V
Sbjct: 471 DLTRGEYVARRLMEETGPENASIYVLV 497
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 265 bits (676), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 138/369 (37%), Positives = 220/369 (59%), Gaps = 3/369 (0%)
Query: 249 NGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCF 308
+ + SS +++C DF G H +K G + + +SL+ +Y SG +E A K F
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVF 178
Query: 309 DLLFEKSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGAACIGTIG 367
+ + E+++VS ++ ++ D L + + +T+ LLS G +G
Sbjct: 179 EEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALG 238
Query: 368 KGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFA 427
+G +H + G ++ L I+N+LISMY KCG+ + A ++F+ +++V++W S+I+G+A
Sbjct: 239 QGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYA 298
Query: 428 KHGYATKALELFYEML-ETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPR 486
+HG A +A+ELF M+ ++G KP+ +TY+ VLS+C H GL+ EG K FN M HG+ P
Sbjct: 299 QHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAE-HGLKPE 357
Query: 487 VEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMIL 546
+ HY+C+VD+LGR GLL EA+E I +MP+ ++++W SLL SCRVHG+ G AA+ L
Sbjct: 358 LNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERL 417
Query: 547 EREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGD 606
EP AT++ L+NLYA+ W + A +RK MK K + G SWIE+ N V F D
Sbjct: 418 MLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNYVFMFKAED 477
Query: 607 TSHPQAQKI 615
S+ + +I
Sbjct: 478 GSNCRMLEI 486
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 186/385 (48%), Gaps = 27/385 (7%)
Query: 37 GFYPNEYCFTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIE 96
G+ + Y ++A+R+C + F G LK G F S V +G L+ ++ + G++E
Sbjct: 115 GWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGG-FISDVYLGSSLVVLY-RDSGEVE 172
Query: 97 SAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACA 156
+A++VFE+M ERNVV+W M++ FAQ + + L+ +M S P+ +T T+ L+AC
Sbjct: 173 NAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACT 232
Query: 157 ELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVS 216
L G+ +H + GL L + SL+ MY KC G L D+ R+F+ +VVS
Sbjct: 233 GSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKC---GDLKDAFRIFDQFSNKDVVS 289
Query: 217 WTALIAGYVRGSGQEQEAMRLFCDML-QGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQ 275
W ++IAGY + G +A+ LF M+ + P+ T+ VL +C + G + +
Sbjct: 290 WNSMIAGYAQ-HGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNL 348
Query: 276 TIKLGLSAVNCVANSLINMYARSGRLECARKCFD--------LLFEKSLVSCETIVDVIV 327
+ GL + L+++ R G L+ A + + +++ L SC DV
Sbjct: 349 MAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWT 408
Query: 328 RDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETN--- 384
++E L E + C+ T+ L + A +G + + L+ G +TN
Sbjct: 409 GIRAAEERLMLEPD-------CAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGC 461
Query: 385 --LSINNALISMYSKCGNKEAALQV 407
+ INN + ++ G+ L++
Sbjct: 462 SWIEINNYVFMFKAEDGSNCRMLEI 486
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 113/220 (51%), Gaps = 7/220 (3%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
+R++VSW +M+S FA L + M + PN+Y FTA L AC+ S GR
Sbjct: 183 ERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRS 242
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
V L G S++ + LI M+ K CGD++ A R+F++ ++VV+WN M+ +AQ
Sbjct: 243 VHCQTLHMG-LKSYLHISNSLISMYCK-CGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQH 300
Query: 124 GYPEDSIDLF-FRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCV 182
G +I+LF M SG PD T L++C L+ G++ + + GL +L
Sbjct: 301 GLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNH 360
Query: 183 GCSLVDMYAKCAVDGSLVDSRRVFNSMP-EHNVVSWTALI 221
LVD+ + G L ++ + +MP + N V W +L+
Sbjct: 361 YSCLVDLLGRF---GLLQEALELIENMPMKPNSVIWGSLL 397
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 171/538 (31%), Positives = 287/538 (53%), Gaps = 38/538 (7%)
Query: 58 FSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMM 117
F GRV+ ++ +G + +L+ +V+ CG + A +VF++M +R++ +M+
Sbjct: 32 FCRGRVLHAHLVTSG-IARLTRIAAKLVTFYVE-CGKVLDARKVFDEMPKRDISGCVVMI 89
Query: 118 TRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLA 177
A+ GY ++S+D F M G D F + S L A L GK +H V++
Sbjct: 90 GACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYE 149
Query: 178 LDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRL 237
D + SL+DMY+K G + ++R+VF+ + E ++V + A+I+GY S Q EA+ L
Sbjct: 150 SDAFIVSSLIDMYSKF---GEVGNARKVFSDLGEQDLVVFNAMISGYANNS-QADEALNL 205
Query: 238 FCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYAR 297
DM + P+ T+++++ +++ + E+ S+ ++L
Sbjct: 206 VKDMKLLGIKPDVITWNALISGFSHMRN----EEKVSEILEL------------------ 243
Query: 298 SGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTT-GIGACSFTYACL 356
C D ++ +VS +I+ +V + +++ + + T G+ S T L
Sbjct: 244 --------MCLDG-YKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITL 294
Query: 357 LSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNV 416
L + + G++IH V +G E + + +AL+ MY KCG A+ +F +
Sbjct: 295 LPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTT 354
Query: 417 ITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNS 476
+T+ S+I +A HG A KA+ELF +M TG K + +T+ A+L+ACSH GL D G F
Sbjct: 355 VTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLL 414
Query: 477 MRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTE 536
M++ + +VPR+EHYACMVD+LGR+G L EA E I +M ++ D VW +LL +CR HGN E
Sbjct: 415 MQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNME 474
Query: 537 LGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIE 594
L AAK + E EP + +LL++LYA W V ++K +K+K+ + G SW+E
Sbjct: 475 LARIAAKHLAELEPENSGNGLLLTSLYANAGSWESVVRMKKMIKKKRFRRFLGSSWVE 532
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 112/228 (49%), Gaps = 15/228 (6%)
Query: 2 GSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVG 61
G K D+VSW S++S +N +A F ML HG YPN L AC+ Y G
Sbjct: 248 GYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHG 307
Query: 62 RVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFA 121
+ + G + TG + H V L+DM+ K CG I A +F K ++ VT+N M+ +A
Sbjct: 308 KEIHGYSVVTG-LEDHGFVRSALLDMYGK-CGFISEAMILFRKTPKKTTVTFNSMIFCYA 365
Query: 122 QMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQL-----HSWVIRSGL 176
G + +++LF +M +G D T T+ LTAC+ L +G+ L + + I L
Sbjct: 366 NHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRL 425
Query: 177 ALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMP-EHNVVSWTALIAG 223
C +VD+ + G LV++ + +M E ++ W AL+A
Sbjct: 426 EHYAC----MVDLLGRA---GKLVEAYEMIKAMRMEPDLFVWGALLAA 466
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 261 bits (668), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 164/537 (30%), Positives = 280/537 (52%), Gaps = 59/537 (10%)
Query: 98 AHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDR--FTLTSALTAC 155
A +F++M ERNVV+WN M+ +AQ G + +++LF M P+R + S + A
Sbjct: 128 AEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEM------PERNIVSWNSMVKAL 181
Query: 156 AELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVV 215
+ + L + R D+ ++VD AK +G + ++RR+F+ MPE N++
Sbjct: 182 VQRGRIDEAMNLFERMPRR----DVVSWTAMVDGLAK---NGKVDEARRLFDCMPERNII 234
Query: 216 SWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQ 275
SW A+I GY + + + EA +LF M P+ F
Sbjct: 235 SWNAMITGYAQNN-RIDEADQLFQVM----------------------PERDFASW---- 267
Query: 276 TIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDET 335
N++I + R+ + A FD + EK+++S T++ V + ++E
Sbjct: 268 -------------NTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEA 314
Query: 336 LN--HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALIS 393
LN + + TY +LS + + + +G+QIH L+ KS + N + +AL++
Sbjct: 315 LNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLN 374
Query: 394 MYSKCGNKEAALQVFND--MGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPND 451
MYSK G AA ++F++ + R++I+W S+I+ +A HG+ +A+E++ +M + G KP+
Sbjct: 375 MYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSA 434
Query: 452 VTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFIN 511
VTY+ +L ACSH GL+++G + F + + R EHY C+VD+ GR+G L + FIN
Sbjct: 435 VTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFIN 494
Query: 512 SMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYD 571
+ ++L +C VH + + K +LE D TY+L+SN+YA + +
Sbjct: 495 CDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREE 554
Query: 572 VAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELDELASKIKK 628
A +R MK+K + K+ G SW++V Q H F VGD SHPQ + + L +L +K++K
Sbjct: 555 AAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSDLRNKMRK 611
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 199/411 (48%), Gaps = 63/411 (15%)
Query: 193 CAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFT 252
C V G + ++R++F+ +PE +VV+WT +I GY++ G +EA LF + + N T
Sbjct: 57 CKV-GKIAEARKLFDGLPERDVVTWTHVITGYIK-LGDMREARELFDRV---DSRKNVVT 111
Query: 253 FSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVA-NSLINMYARSGRLECARKCFDLL 311
+++++ E L + + N V+ N++I+ YA+SGR++ A + FD +
Sbjct: 112 WTAMVSGYLRSKQLSIAEMLFQE-----MPERNVVSWNTMIDGYAQSGRIDKALELFDEM 166
Query: 312 FEKSLVSCETIVDVIVRDLNSDETLN-----------HETEHTTGIGACS---------- 350
E+++VS ++V +V+ DE +N T G+
Sbjct: 167 PERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFD 226
Query: 351 -------FTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEA 403
++ +++G A I + +Q+ ++ + F + N +I+ + +
Sbjct: 227 CMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFAS----WNTMITGFIRNREMNK 282
Query: 404 ALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETG-VKPNDVTYIAVLSACS 462
A +F+ M ++NVI+WT++I+G+ ++ +AL +F +ML G VKPN TY+++LSACS
Sbjct: 283 ACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACS 342
Query: 463 HVGLIDEGWKHFNSMRHCHGVVPRVEHY------ACMVDVLGRSGLLSEAIE-FINSMPL 515
+ + EG + H ++ + H + ++++ +SG L A + F N +
Sbjct: 343 DLAGLVEG-------QQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVC 395
Query: 516 DADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPH--DPATYILLSNLYA 564
D + W S++ HG+ G+ A +M + H P+ L+ L+A
Sbjct: 396 QRDLISWNSMIAVYAHHGH---GKEAIEMYNQMRKHGFKPSAVTYLNLLFA 443
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 121/478 (25%), Positives = 211/478 (44%), Gaps = 54/478 (11%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
+RD+V+W +++ + EA F D ++ N +TA + S S+ +
Sbjct: 74 ERDVVTWTHVITGYIKLGDMREARELF-DRVDS--RKNVVTWTAMVSGYLRSKQLSIAEM 130
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
+F + + +V +ID + + G I+ A +F++M ERN+V+WN M+ Q
Sbjct: 131 LFQEMP-----ERNVVSWNTMIDGYAQ-SGRIDKALELFDEMPERNIVSWNSMVKALVQR 184
Query: 124 GYPEDSIDLFFRM----------LLSGYT---------------PDR--FTLTSALTACA 156
G +++++LF RM ++ G P+R + + +T A
Sbjct: 185 GRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYA 244
Query: 157 ELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVS 216
+ + QL + A S M + + + +F+ MPE NV+S
Sbjct: 245 QNNRIDEADQLFQVMPERDFA-------SWNTMITGFIRNREMNKACGLFDRMPEKNVIS 297
Query: 217 WTALIAGYVRGSGQEQEAMRLFCDMLQ-GNVAPNGFTFSSVLKACANLPDFGFGEQLHSQ 275
WT +I GYV + +EA+ +F ML+ G+V PN T+ S+L AC++L G+Q+H
Sbjct: 298 WTTMITGYVENK-ENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQL 356
Query: 276 TIKLGLSAVNCVANSLINMYARSGRLECARKCFD--LLFEKSLVSCETIVDVIVRDLNSD 333
K V ++L+NMY++SG L ARK FD L+ ++ L+S +++ V +
Sbjct: 357 ISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGK 416
Query: 334 ETL---NHETEHTTGIGACSFTYACLLSGAACIGTIGKG-EQIHALVVKSGFETNLSINN 389
E + N +H G + TY LL + G + KG E LV
Sbjct: 417 EAIEMYNQMRKH--GFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYT 474
Query: 390 ALISMYSKCGNKEAALQVFN-DMGDRNVITWTSIISGFAKHGYATKALELFYEMLETG 446
L+ + + G + N D + + +I+S H + A E+ ++LETG
Sbjct: 475 CLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETG 532
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 109/238 (45%), Gaps = 20/238 (8%)
Query: 291 LINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVR--DLNSDETLNHETEHTTGIGA 348
LI + G++ ARK FD L E+ +V+ ++ ++ D+ L + +
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNV-- 109
Query: 349 CSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVF 408
T+ ++SG K I ++ + E N+ N +I Y++ G + AL++F
Sbjct: 110 --VTWTAMVSGY----LRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELF 163
Query: 409 NDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLID 468
++M +RN+++W S++ + G +A+ LF M V V++ A++ + G +D
Sbjct: 164 DEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDV----VSWTAMVDGLAKNGKVD 219
Query: 469 EGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLL 526
E + F+ M + + + M+ ++ + EA + MP + D W +++
Sbjct: 220 EARRLFDCMPERNII-----SWNAMITGYAQNNRIDEADQLFQVMP-ERDFASWNTMI 271
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 176/558 (31%), Positives = 277/558 (49%), Gaps = 48/558 (8%)
Query: 109 NVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLH 168
NV +N M++ A + L+ M+ +PDR T + A + LS KQ+H
Sbjct: 99 NVFVYNTMIS--AVSSSKNECFGLYSSMIRHRVSPDRQTFLYLMKASS---FLSEVKQIH 153
Query: 169 SWVIRSG-LALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRG 227
+I SG L+L + SLV Y + G+ + +VF MP +V S+ +I GY +
Sbjct: 154 CHIIVSGCLSLGNYLWNSLVKFYMEL---GNFGVAEKVFARMPHPDVSSFNVMIVGYAK- 209
Query: 228 SGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLG--LSAVN 285
G EA++L+ M+ + P+ +T S+L C +L D G+ +H + G S+
Sbjct: 210 QGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNL 269
Query: 286 CVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVR----------------- 328
++N+L++MY + A++ FD + +K + S T+V VR
Sbjct: 270 ILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKR 329
Query: 329 -----------------DLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQ 371
D + L +E + T L+SGAA G + G
Sbjct: 330 DLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRW 389
Query: 372 IHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGY 431
+H LV++ + + +++ALI MY KCG E A VF +++V WTS+I+G A HG
Sbjct: 390 VHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGN 449
Query: 432 ATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYA 491
+AL+LF M E GV PN+VT +AVL+ACSH GL++EG FN M+ G P EHY
Sbjct: 450 GQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYG 509
Query: 492 CMVDVLGRSGLLSEAIEFIN-SMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREP 550
+VD+L R+G + EA + + MP+ +W S+L +CR + E E A +L+ EP
Sbjct: 510 SLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEP 569
Query: 551 HDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDT-SH 609
Y+LLSN+YAT RW R+ M+ + + K AGYS + +H+F + +H
Sbjct: 570 EKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQNH 629
Query: 610 PQAQKIYDELDELASKIK 627
P+ +I L L +++K
Sbjct: 630 PRWTEIKRILQHLYNEMK 647
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 113/483 (23%), Positives = 213/483 (44%), Gaps = 82/483 (16%)
Query: 18 ANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVLKTGYFDSH 77
A +S ++E + M+ H P+ F ++A S + S + + ++ +G
Sbjct: 109 AVSSSKNECFGLYSSMIRHRVSPDRQTFLYLMKASS---FLSEVKQIHCHIIVSGC---- 161
Query: 78 VSVGCELIDMFVK---GCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFF 134
+S+G L + VK G+ A +VF +M +V ++N+M+ +A+ G+ +++ L+F
Sbjct: 162 LSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYF 221
Query: 135 RMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSG--LALDLCVGCSLVDMYAK 192
+M+ G PD +T+ S L C L + +GK +H W+ R G + +L + +L+DMY K
Sbjct: 222 KMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFK 281
Query: 193 C--------AVD--------------------GSLVDSRRVFNSMPEHNVVSWTALIAGY 224
C A D G + ++ VF+ MP+ ++VSW +L+ GY
Sbjct: 282 CKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGY 341
Query: 225 VRGSGQEQEAMRLFCDM-LQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSA 283
+ ++ LF +M + V P+ T S++ AN + G +H I+L L
Sbjct: 342 SKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKG 401
Query: 284 VNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHT 343
++++LI+MY + G +E A F EK DV +
Sbjct: 402 DAFLSSALIDMYCKCGIIERAFMVFKTATEK---------DVAL---------------- 436
Query: 344 TGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEA 403
+ +++G A G + Q+ + + G N A+++ S G E
Sbjct: 437 ---------WTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEE 487
Query: 404 ALQVFNDMGDR-----NVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVL 458
L VFN M D+ + S++ + G +A ++ + + ++P+ + ++L
Sbjct: 488 GLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMP--MRPSQSMWGSIL 545
Query: 459 SAC 461
SAC
Sbjct: 546 SAC 548
Score = 126 bits (316), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 182/405 (44%), Gaps = 69/405 (17%)
Query: 6 DLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVF 65
D+ S+ M+ +A EAL + M+ G P+EY + L C + +G+ V
Sbjct: 196 DVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVH 255
Query: 66 GSVLKTG-YFDSHVSVGCELIDMFVK------------------------------GCGD 94
G + + G + S++ + L+DM+ K GD
Sbjct: 256 GWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGD 315
Query: 95 IESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSI-DLFFRM-LLSGYTPDRFTLTSAL 152
+E+A VF++M +R++V+WN ++ +++ G + ++ +LF+ M ++ PDR T+ S +
Sbjct: 316 MEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLI 375
Query: 153 TACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH 212
+ A LS G+ +H VIR L D + +L+DMY KC G + + VF + E
Sbjct: 376 SGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKC---GIIERAFMVFKTATEK 432
Query: 213 NVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQL 272
+V WT++I G + G Q+A++LF M + V PN T +VL AC+
Sbjct: 433 DVALWTSMITG-LAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACS----------- 480
Query: 273 HSQTIKLGLSAVNCVAN------------SLINMYARSGRLECARKCFDL---------L 311
HS ++ GL N + + SL+++ R+GR+E A+ +
Sbjct: 481 HSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSM 540
Query: 312 FEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACL 356
+ L +C D+ +L E L E E G S YA +
Sbjct: 541 WGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATV 585
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 80/163 (49%), Gaps = 4/163 (2%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVT-FLDM-LEHGFYPNEYCFTAALRACSNSLYFSVG 61
KRDLVSW S++ ++ + + F +M + P+ + + +N+ S G
Sbjct: 328 KRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHG 387
Query: 62 RVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFA 121
R V G V++ + LIDM+ K CG IE A VF+ E++V W M+T A
Sbjct: 388 RWVHGLVIRL-QLKGDAFLSSALIDMYCK-CGIIERAFMVFKTATEKDVALWTSMITGLA 445
Query: 122 QMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVG 164
G + ++ LF RM G TP+ TL + LTAC+ L+ G
Sbjct: 446 FHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEG 488
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 255 bits (652), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 163/504 (32%), Positives = 261/504 (51%), Gaps = 40/504 (7%)
Query: 153 TACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH 212
T C+ + L KQ+H+ +I++GL D V S V + CA + + VF +
Sbjct: 33 TQCSTMREL---KQIHASLIKTGLISD-TVTASRVLAFC-CASPSDMNYAYLVFTRINHK 87
Query: 213 NVVSWTALIAGYVRGSGQEQEAMRLFCDML--QGNVAPNGFTFSSVLKACANLPDFGFGE 270
N W +I G+ R S E A+ +F DML +V P T+ SV KA L G
Sbjct: 88 NPFVWNTIIRGFSRSSFPEM-AISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGR 146
Query: 271 QLHSQTIKLGLSAVNCVANSLINMY-------------------------------ARSG 299
QLH IK GL + + N++++MY A+ G
Sbjct: 147 QLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCG 206
Query: 300 RLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETE-HTTGIGACSFTYACLLS 358
++ A+ FD + +++ VS +++ VR+ + L+ E + FT LL+
Sbjct: 207 LIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLN 266
Query: 359 GAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVIT 418
A +G +G IH +V++ FE N + ALI MY KCG E L VF + +
Sbjct: 267 ACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSC 326
Query: 419 WTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMR 478
W S+I G A +G+ +A++LF E+ +G++P+ V++I VL+AC+H G + + F M+
Sbjct: 327 WNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMK 386
Query: 479 HCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELG 538
+ + P ++HY MV+VLG +GLL EA I +MP++ D ++W SLL +CR GN E+
Sbjct: 387 EKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMA 446
Query: 539 EHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQ 598
+ AAK + + +P + Y+LLSN YA+ + + R MK++++ KE G S IEV+ +
Sbjct: 447 KRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFE 506
Query: 599 VHKFHVGDTSHPQAQKIYDELDEL 622
VH+F +HP++ +IY LD L
Sbjct: 507 VHEFISCGGTHPKSAEIYSLLDIL 530
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 105/449 (23%), Positives = 207/449 (46%), Gaps = 50/449 (11%)
Query: 62 RVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFA 121
+ + S++KTG V+ ++ D+ A+ VF ++ +N WN ++ F+
Sbjct: 42 KQIHASLIKTGLISDTVTAS-RVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFS 100
Query: 122 QMGYPEDSIDLFFRMLLSGYT--PDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALD 179
+ +PE +I +F ML S + P R T S A L G+QLH VI+ GL D
Sbjct: 101 RSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDD 160
Query: 180 LCVGCSLVDMYAKCAVDGSLVDSRRVF-------------------------------NS 208
+ +++ MY C G L+++ R+F +
Sbjct: 161 SFIRNTMLHMYVTC---GCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDE 217
Query: 209 MPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGF 268
MP+ N VSW ++I+G+VR +G+ ++A+ +F +M + +V P+GFT S+L ACA L
Sbjct: 218 MPQRNGVSWNSMISGFVR-NGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQ 276
Query: 269 GEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVR 328
G +H ++ + V +LI+MY + G +E F+ +K L +++ +
Sbjct: 277 GRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLAN 336
Query: 329 DLNSDETLNHETE-HTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVV-KSGFETNLS 386
+ + ++ +E +G+ S ++ +L+ A G + + ++ L+ K E ++
Sbjct: 337 NGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIK 396
Query: 387 INNALISMYSKCGNKEAALQVFNDMG-DRNVITWTSIISGFAKHG---YATKALELFYEM 442
++++ G E A + +M + + + W+S++S K G A +A + ++
Sbjct: 397 HYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKL 456
Query: 443 LETGVKPNDVT-YIAVLSACSHVGLIDEG 470
P++ Y+ + +A + GL +E
Sbjct: 457 -----DPDETCGYVLLSNAYASYGLFEEA 480
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 136/285 (47%), Gaps = 37/285 (12%)
Query: 10 WCSMMSCFANNSMEHEALVTFLDML--EHGFYPNEYCFTAALRACSNSLYFSVGRVVFGS 67
W +++ F+ +S A+ F+DML P + + +A GR + G
Sbjct: 92 WNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGM 151
Query: 68 VLKTGYFDS----------HVSVGC--------------------ELIDMFVKGCGDIES 97
V+K G D +V+ GC +I F K CG I+
Sbjct: 152 VIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAK-CGLIDQ 210
Query: 98 AHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAE 157
A +F++M +RN V+WN M++ F + G +D++D+F M PD FT+ S L ACA
Sbjct: 211 AQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAY 270
Query: 158 LELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSW 217
L G+ +H +++R+ L+ V +L+DMY KC G + + VF P+ + W
Sbjct: 271 LGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKC---GCIEEGLNVFECAPKKQLSCW 327
Query: 218 TALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACAN 262
++I G + +G E+ AM LF ++ + + P+ +F VL ACA+
Sbjct: 328 NSMILG-LANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAH 371
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 255 bits (651), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 147/465 (31%), Positives = 257/465 (55%), Gaps = 9/465 (1%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGF-YPNEYCFTAALRACSNSLYFSVGR 62
+++ V+W +M+ + +E EA F D ++HG + NE F L CS F +GR
Sbjct: 145 EKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGR 204
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
V G+++K G ++ V L+ F CG++ SA R F+ M+E++V++W +++ ++
Sbjct: 205 QVHGNMVKVGV--GNLIVESSLV-YFYAQCGELTSALRAFDMMEEKDVISWTAVISACSR 261
Query: 123 MGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCV 182
G+ +I +F ML + P+ FT+ S L AC+E + L G+Q+HS V++ + D+ V
Sbjct: 262 KGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFV 321
Query: 183 GCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDML 242
G SL+DMYAKC G + D R+VF+ M N V+WT++IA + R G +EA+ LF M
Sbjct: 322 GTSLMDMYAKC---GEISDCRKVFDGMSNRNTVTWTSIIAAHAR-EGFGEEAISLFRIMK 377
Query: 243 QGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLE 302
+ ++ N T S+L+AC ++ G++LH+Q IK + + ++L+ +Y + G
Sbjct: 378 RRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESR 437
Query: 303 CARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTT-GIGACSFTYACLLSGAA 361
A L + +VS ++ + E L+ E G+ FTY+ L A
Sbjct: 438 DAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACA 497
Query: 362 CIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTS 421
++ G IH++ K+ +N+ + +ALI MY+KCG A +VF+ M ++N+++W +
Sbjct: 498 NSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKA 557
Query: 422 IISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGL 466
+I G+A++G+ +AL+L Y M G + +D + +LS C + L
Sbjct: 558 MIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDIEL 602
Score = 215 bits (547), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 138/465 (29%), Positives = 243/465 (52%), Gaps = 18/465 (3%)
Query: 75 DSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFF 134
D + G LI V+ GD+ A +VF+ M E+N VTW M+ + + G +++ LF
Sbjct: 114 DQVIYFGNNLISSCVR-LGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFE 172
Query: 135 RMLLSG--YTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAK 192
+ G +T +R L C+ +G+Q+H +++ G+ +L V SLV YA+
Sbjct: 173 DYVKHGIRFTNERM-FVCLLNLCSRRAEFELGRQVHGNMVKVGVG-NLIVESSLVYFYAQ 230
Query: 193 CAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFT 252
C G L + R F+ M E +V+SWTA+I+ R G +A+ +F ML PN FT
Sbjct: 231 C---GELTSALRAFDMMEEKDVISWTAVISACSR-KGHGIKAIGMFIGMLNHWFLPNEFT 286
Query: 253 FSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLF 312
S+LKAC+ FG Q+HS +K + V SL++MYA+ G + RK FD +
Sbjct: 287 VCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMS 346
Query: 313 EKSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQ 371
++ V+ +I+ R+ +E ++ + A + T +L +G + G++
Sbjct: 347 NRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKE 406
Query: 372 IHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGY 431
+HA ++K+ E N+ I + L+ +Y KCG A V + R+V++WT++ISG + G+
Sbjct: 407 LHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGH 466
Query: 432 ATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYA 491
++AL+ EM++ GV+PN TY + L AC++ + G + +S+ + + V +
Sbjct: 467 ESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIG-RSIHSIAKKNHALSNVFVGS 525
Query: 492 CMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLL------GSCR 530
++ + + G +SEA +SMP + + + W++++ G CR
Sbjct: 526 ALIHMYAKCGFVSEAFRVFDSMP-EKNLVSWKAMIMGYARNGFCR 569
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/323 (35%), Positives = 179/323 (55%), Gaps = 6/323 (1%)
Query: 1 MGSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSV 60
M ++D++SW +++S + +A+ F+ ML H F PNE+ + L+ACS
Sbjct: 243 MMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRF 302
Query: 61 GRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRF 120
GR V V+K + V VG L+DM+ K CG+I +VF+ M RN VTW ++
Sbjct: 303 GRQVHSLVVKR-MIKTDVFVGTSLMDMYAK-CGEISDCRKVFDGMSNRNTVTWTSIIAAH 360
Query: 121 AQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDL 180
A+ G+ E++I LF M + T+ S L AC + L +GK+LH+ +I++ + ++
Sbjct: 361 AREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNV 420
Query: 181 CVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCD 240
+G +LV +Y KC G D+ V +P +VVSWTA+I+G G E EA+ +
Sbjct: 421 YIGSTLVWLYCKC---GESRDAFNVLQQLPSRDVVSWTAMISG-CSSLGHESEALDFLKE 476
Query: 241 MLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGR 300
M+Q V PN FT+SS LKACAN G +HS K + V ++LI+MYA+ G
Sbjct: 477 MIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGF 536
Query: 301 LECARKCFDLLFEKSLVSCETIV 323
+ A + FD + EK+LVS + ++
Sbjct: 537 VSEAFRVFDSMPEKNLVSWKAMI 559
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 143/293 (48%), Gaps = 28/293 (9%)
Query: 270 EQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRD 329
+++H+ +K V N+LI+ R G L ARK FD + EK+ V+ ++D ++
Sbjct: 102 KRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKY 161
Query: 330 LNSDETLNHETEHTT-GIGACSFT----YACLLSGAACIGTIGKGEQIHALVVKSGFETN 384
DE ++ GI FT + CLL+ + G Q+H +VK G N
Sbjct: 162 GLEDEAFALFEDYVKHGI---RFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGV-GN 217
Query: 385 LSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLE 444
L + ++L+ Y++CG +AL+ F+ M +++VI+WT++IS ++ G+ KA+ +F ML
Sbjct: 218 LIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLN 277
Query: 445 TGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPR------VEHYACMVDVLG 498
PN+ T ++L ACS + G R H +V + V ++D+
Sbjct: 278 HWFLPNEFTVCSILKACSEEKALRFG-------RQVHSLVVKRMIKTDVFVGTSLMDMYA 330
Query: 499 RSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKM--ILERE 549
+ G +S+ + + M + + + W S++ + H GE A + I++R
Sbjct: 331 KCGEISDCRKVFDGMS-NRNTVTWTSIIAA---HAREGFGEEAISLFRIMKRR 379
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 173/587 (29%), Positives = 300/587 (51%), Gaps = 29/587 (4%)
Query: 26 ALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCELI 85
A + +LE GF Y L+ LYF G V+ L FD
Sbjct: 23 AKIVHAQLLEAGFVRTTYWGNRCLQ-----LYFKSGSVINALQL----FDDIPDKNTITW 73
Query: 86 DMFVKGC---GDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYT 142
++ +KG G + +A +F++M ER+VV+WN M++ G+ E I +FF M
Sbjct: 74 NVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIR 133
Query: 143 PDRFTLT--SALTACAELELLSVGKQLHSWVIRSGLA-LDLCVGCSLVDMYAKCAV-DGS 198
P FT + ++L C G+Q+H I SG++ +L V S++DMY + V D +
Sbjct: 134 PTEFTFSILASLVTCVRH-----GEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYA 188
Query: 199 LVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLK 258
L VF +M + +VVSW LI SG ++ A+ F M + + P+ +T S V+
Sbjct: 189 L----SVFLTMEDRDVVSWNCLILS-CSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVS 243
Query: 259 ACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVS 318
C++L + G+Q + IK+G + + V + I+M+++ RL+ + K F L + V
Sbjct: 244 ICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVL 303
Query: 319 CETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVV 377
C +++ ++ L T + FT++ +LS + + G +H+LV+
Sbjct: 304 CNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAV-MLDHGADVHSLVI 362
Query: 378 KSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALE 437
K GF+ + ++ +L+ MY K G+ + A+ VF +++I W ++I G A++ A ++L
Sbjct: 363 KLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLA 422
Query: 438 LFYEML-ETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDV 496
+F ++L +KP+ VT + +L AC + G ++EG + F+SM HGV P EHYAC++++
Sbjct: 423 IFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIEL 482
Query: 497 LGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATY 556
L R G+++EA + + +P + + +W +L + G+T L E AK +LE EP Y
Sbjct: 483 LCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPY 542
Query: 557 ILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFH 603
++L +Y RW + +R M + K+ G S I +E+ V F
Sbjct: 543 LVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSFE 589
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 168/335 (50%), Gaps = 13/335 (3%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFT--AALRACSNSLYFSVG 61
+RD+VSW +M+S + + F DM P E+ F+ A+L C G
Sbjct: 98 ERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRH-----G 152
Query: 62 RVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFA 121
+ G+ + +G ++ V ++DM+ + G + A VF M++R+VV+WN ++ +
Sbjct: 153 EQIHGNAICSGVSRYNLVVWNSVMDMY-RRLGVFDYALSVFLTMEDRDVVSWNCLILSCS 211
Query: 122 QMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLC 181
G E ++D F+ M PD +T++ ++ C++L LS GKQ + I+ G +
Sbjct: 212 DSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSI 271
Query: 182 VGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDM 241
V + +DM++KC L DS ++F + + + V ++I Y E +A+RLF
Sbjct: 272 VLGAGIDMFSKC---NRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGE-DALRLFILA 327
Query: 242 LQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRL 301
+ +V P+ FTFSSVL + N G +HS IKLG VA SL+ MY ++G +
Sbjct: 328 MTQSVRPDKFTFSSVLSS-MNAVMLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSV 386
Query: 302 ECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETL 336
+ A F K L+ T++ + R+ + E+L
Sbjct: 387 DLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESL 421
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 155/315 (49%), Gaps = 12/315 (3%)
Query: 5 RDLVSW-CSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
RD+VSW C ++SC +++ + AL F M E P+EY + + CS+ S G+
Sbjct: 198 RDVVSWNCLILSC-SDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQ 256
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
+K G+ + + +G IDMF K C ++ + ++F ++++ + V N M+ ++
Sbjct: 257 ALALCIKMGFLSNSIVLGAG-IDMFSK-CNRLDDSVKLFRELEKWDSVLCNSMIGSYSWH 314
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVG 183
ED++ LF + PD+FT +S L++ + +L G +HS VI+ G LD V
Sbjct: 315 CCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAV-MLDHGADVHSLVIKLGFDLDTAVA 373
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQ 243
SL++MY K GS+ + VF +++ W +I G R S + E++ +F +L
Sbjct: 374 TSLMEMYFKT---GSVDLAMGVFAKTDGKDLIFWNTVIMGLARNS-RAVESLAIFNQLLM 429
Query: 244 G-NVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKL-GLSAVNCVANSLINMYARSGRL 301
++ P+ T +L AC G Q+ S K G++ N +I + R G +
Sbjct: 430 NQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMI 489
Query: 302 ECARKCFD-LLFEKS 315
A+ D + FE S
Sbjct: 490 NEAKDIADKIPFEPS 504
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 252 bits (643), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 153/465 (32%), Positives = 243/465 (52%), Gaps = 37/465 (7%)
Query: 207 NSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDF 266
N VSWT+ I R +G+ EA + F DM V PN TF ++L C +
Sbjct: 29 NQSTSETTVSWTSRINLLTR-NGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSG 87
Query: 267 --GFGEQLHSQTIKLGLSAVNC-VANSLINMYARSGRLECARKCFDLLFEKSLVSCETIV 323
G+ LH KLGL + V ++I MY++ GR + AR FD + +K+ V+ T++
Sbjct: 88 SEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMI 147
Query: 324 DVIVR-----------DLNSDETLNHETEHTTGIGACSFTYACLL-------SGA----- 360
D +R D + L T G + LL SG
Sbjct: 148 DGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYV 207
Query: 361 -------AC--IGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDM 411
AC +G + G +H V+ F+ N+ ++N+LI +Y +CG E A QVF +M
Sbjct: 208 AIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNM 267
Query: 412 GDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGW 471
R V++W S+I GFA +G A ++L F +M E G KP+ VT+ L+ACSHVGL++EG
Sbjct: 268 EKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGL 327
Query: 472 KHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRV 531
++F M+ + + PR+EHY C+VD+ R+G L +A++ + SMP+ + +V SLL +C
Sbjct: 328 RYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSN 387
Query: 532 HGNT-ELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGY 590
HGN L E K + + + Y++LSN+YA + +W + +R+ MK + K+ G+
Sbjct: 388 HGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGF 447
Query: 591 SWIEVENQVHKFHVGDTSHPQAQKIYDELDELASKIKKLGYVPNT 635
S IE+++ +H F GD +H + I + L+ ++S ++ G V T
Sbjct: 448 SSIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQGCVVET 492
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 161/335 (48%), Gaps = 43/335 (12%)
Query: 8 VSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSN--SLYFSVGRVVF 65
VSW S ++ N EA F DM G PN F A L C + S ++G ++
Sbjct: 37 VSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLH 96
Query: 66 GSVLKTGYFDSHVSVGCELIDMFVKG------------------------------CGDI 95
G K G +HV VG +I M+ K G +
Sbjct: 97 GYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQV 156
Query: 96 ESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTAC 155
++A ++F+KM ER++++W M+ F + GY E+++ F M +SG PD + +AL AC
Sbjct: 157 DNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNAC 216
Query: 156 AELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVV 215
L LS G +H +V+ ++ V SL+D+Y +C G + +R+VF +M + VV
Sbjct: 217 TNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRC---GCVEFARQVFYNMEKRTVV 273
Query: 216 SWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQ--LH 273
SW ++I G+ +G E++ F M + P+ TF+ L AC+++ G E+ +
Sbjct: 274 SWNSVIVGFA-ANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHV---GLVEEGLRY 329
Query: 274 SQTIKLGLSAVNCVAN--SLINMYARSGRLECARK 306
Q +K + + L+++Y+R+GRLE A K
Sbjct: 330 FQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALK 364
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 143/308 (46%), Gaps = 49/308 (15%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
+RDL+SW +M++ F + EAL+ F +M G P+ AAL AC+N S G
Sbjct: 168 ERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLW 227
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
V VL F ++V V LID++ + CG +E A +VF M++R VV+WN ++ FA
Sbjct: 228 VHRYVLSQD-FKNNVRVSNSLIDLYCR-CGCVEFARQVFYNMEKRTVVSWNSVIVGFAAN 285
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCV- 182
G +S+ F +M G+ PD T T ALTAC+ + L+ G + +++ + +
Sbjct: 286 GNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQ-IMKCDYRISPRIE 344
Query: 183 --GCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCD 240
GC LVD+Y++ G L D+ ++ SMP
Sbjct: 345 HYGC-LVDLYSRA---GRLEDALKLVQSMP------------------------------ 370
Query: 241 MLQGNVAPNGFTFSSVLKACANL-PDFGFGEQLHSQTIKLGL-SAVNCVANSLINMYARS 298
+ PN S+L AC+N + E+L L + S N V L NMYA
Sbjct: 371 -----MKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVI--LSNMYAAD 423
Query: 299 GRLECARK 306
G+ E A K
Sbjct: 424 GKWEGASK 431
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 131/370 (35%), Positives = 213/370 (57%), Gaps = 29/370 (7%)
Query: 353 YACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMG 412
+ L A + ++ +++H ++S F + +NN +ISM+ +C + A +VF+ M
Sbjct: 239 FVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMV 298
Query: 413 DRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWK 472
D+++ +W ++ ++ +G AL LF EM + G+KPN+ T++ V AC+ VG I+E +
Sbjct: 299 DKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFL 358
Query: 473 HFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVH 532
HF+SM++ HG+ P+ EHY ++ VLG+ G L EA ++I +P + A W ++ R+H
Sbjct: 359 HFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLH 418
Query: 533 GNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSW 592
G+ +L ++ +++++ DP+ ++ N T K+ K+ ++
Sbjct: 419 GDIDLEDYMEELMVDV---DPSKAVI--NKIPTPPP--------KSFKETNMVTSKS-RI 464
Query: 593 IEVENQVHKFHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTDFVLHDVEDEQKEQYLF 652
+E N DE E+A+K K + YVP+T FVLHD++ E KEQ L
Sbjct: 465 LEFRNLTF--------------YKDEAKEMAAK-KGVVYVPDTRFVLHDIDQEAKEQALL 509
Query: 653 QHSEKIAVAFALISIPNPKPIRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHIK 712
HSE++A+A+ +I P K + I KNLRVCGDCH IK +SK+ GRV++VRD RFHH K
Sbjct: 510 YHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKIIGRVLIVRDNKRFHHFK 569
Query: 713 DGTCSCNDYW 722
DG CSC DYW
Sbjct: 570 DGKCSCGDYW 579
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 74/145 (51%), Gaps = 8/145 (5%)
Query: 119 RFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLAL 178
R Q +D+I+L L G PDR +CA L+ L K++H ++S
Sbjct: 214 RLCQRRLYKDAIEL----LDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRG 269
Query: 179 DLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLF 238
D + ++ M+ +C+ S+ D++RVF+ M + ++ SW ++ Y +G +A+ LF
Sbjct: 270 DPKLNNMVISMFGECS---SITDAKRVFDHMVDKDMDSWHLMMCAY-SDNGMGDDALHLF 325
Query: 239 CDMLQGNVAPNGFTFSSVLKACANL 263
+M + + PN TF +V ACA +
Sbjct: 326 EEMTKHGLKPNEETFLTVFLACATV 350
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 86/200 (43%), Gaps = 6/200 (3%)
Query: 31 LDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVK 90
+++L+ G P+ CF +C+N + V L++ F + +I MF +
Sbjct: 225 IELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSK-FRGDPKLNNMVISMFGE 283
Query: 91 GCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTS 150
C I A RVF+ M ++++ +W+LMM ++ G +D++ LF M G P+ T +
Sbjct: 284 -CSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLT 342
Query: 151 ALTACAELELLSVG-KQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSM 209
ACA + + S G++ ++ + KC G LV++ + +
Sbjct: 343 VFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKC---GHLVEAEQYIRDL 399
Query: 210 PEHNVVSWTALIAGYVRGSG 229
P + + Y R G
Sbjct: 400 PFEPTADFWEAMRNYARLHG 419
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 166/570 (29%), Positives = 294/570 (51%), Gaps = 19/570 (3%)
Query: 45 FTAALRACSNSLYFSVGRVVFGS-----VLKTGYFDSHVSVGCELIDMFVKGCGDIESAH 99
FTA L + + F + G+ LK G D V LI M+ K +
Sbjct: 45 FTAILPSVIKACAFQQEPFLLGAQLHCLCLKAGA-DCDTVVSNSLISMYAKFSRKY-AVR 102
Query: 100 RVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELE 159
+VF++M R+ V++ ++ Q G +++ L M G+ P + S L C +
Sbjct: 103 KVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMG 162
Query: 160 LLS-VGKQLHSWV-IRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSW 217
S V + H+ V + + + + +LVDMY K + + VF+ M N VSW
Sbjct: 163 SSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAA---AFHVFDQMEVKNEVSW 219
Query: 218 TALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFG--FGEQLHSQ 275
TA+I+G V E + LF M + N+ PN T SVL AC L ++G +++H
Sbjct: 220 TAMISGCVANQNYEM-GVDLFRAMQRENLRPNRVTLLSVLPACVEL-NYGSSLVKEIHGF 277
Query: 276 TIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDET 335
+ + G A + + + MY R G + +R F+ + +V +++ + E
Sbjct: 278 SFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEV 337
Query: 336 LNHETE-HTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISM 394
+N + GI A S T ++S + +H+ ++K GF +++ + NALI M
Sbjct: 338 MNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDM 397
Query: 395 YSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTY 454
Y+KCG+ AA +VF ++ ++++++W+S+I+ + HG+ ++ALE+F M++ G + +D+ +
Sbjct: 398 YAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAF 457
Query: 455 IAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMP 514
+A+LSAC+H GL++E F H V +EHYAC +++LGR G + +A E +MP
Sbjct: 458 LAILSACNHAGLVEEAQTIFTQAGKYHMPVT-LEHYACYINLLGRFGKIDDAFEVTINMP 516
Query: 515 LDADAMVWRSLLGSCRVHGNTEL-GEHAAKMILEREPHDPATYILLSNLYATEERWYDVA 573
+ A +W SLL +C HG ++ G+ A +++ EP +PA Y+LLS ++ ++
Sbjct: 517 MKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAE 576
Query: 574 AIRKTMKQKKIIKEAGYSWIEVENQVHKFH 603
+R+ M+++K+ K G+S IE E Q+ +
Sbjct: 577 EVRRVMQRRKLNKCYGFSKIEPELQIEDYQ 606
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 124/463 (26%), Positives = 207/463 (44%), Gaps = 25/463 (5%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFS-VGRV 63
RD VS+CS+++ + + +EA+ +M +GF P + L C+ S V R+
Sbjct: 111 RDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARM 170
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
VL V + L+DM++K D +A VF++M+ +N V+W M++
Sbjct: 171 FHALVLVDERMQESVLLSTALVDMYLK-FDDHAAAFHVFDQMEVKNEVSWTAMISGCVAN 229
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELEL-LSVGKQLHSWVIRSGLALDLCV 182
E +DLF M P+R TL S L AC EL S+ K++H + R G D +
Sbjct: 230 QNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERL 289
Query: 183 GCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDML 242
+ + MY +C G++ SR +F + +VV W+++I+GY +G E M L M
Sbjct: 290 TAAFMTMYCRC---GNVSLSRVLFETSKVRDVVMWSSMISGYAE-TGDCSEVMNLLNQMR 345
Query: 243 QGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLE 302
+ + N T +++ AC N F +HSQ +K G + + N+LI+MYA+ G L
Sbjct: 346 KEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLS 405
Query: 303 CARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN---------HETEHTTGIGACSFTY 353
AR+ F L EK LVS ++++ + E L HE + +
Sbjct: 406 AAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVD--------DMAF 457
Query: 354 ACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGD 413
+LS G + + + I K L I++ + G + A +V +M
Sbjct: 458 LAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPM 517
Query: 414 R-NVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYI 455
+ + W+S++S HG A ++ L N Y+
Sbjct: 518 KPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYV 560
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 249 bits (637), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 127/379 (33%), Positives = 212/379 (55%), Gaps = 4/379 (1%)
Query: 217 WTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQT 276
W ++ Y+R +A++++ M++ V P+ ++ V+KA + DF G++LHS
Sbjct: 85 WNNIMRSYIRHE-SPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVA 143
Query: 277 IKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETL 336
++LG + I +Y ++G E ARK FD E+ L S I+ + ++E +
Sbjct: 144 VRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAV 203
Query: 337 NHETE-HTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFE--TNLSINNALIS 393
+ +G+ FT + + +G + Q+H V+++ E +++ + N+LI
Sbjct: 204 EMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLID 263
Query: 394 MYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVT 453
MY KCG + A +F +M RNV++W+S+I G+A +G +ALE F +M E GV+PN +T
Sbjct: 264 MYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKIT 323
Query: 454 YIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSM 513
++ VLSAC H GL++EG +F M+ + P + HY C+VD+L R G L EA + + M
Sbjct: 324 FVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEM 383
Query: 514 PLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVA 573
P+ + MVW L+G C G+ E+ E A ++E EP + Y++L+N+YA W DV
Sbjct: 384 PMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVE 443
Query: 574 AIRKTMKQKKIIKEAGYSW 592
+RK MK KK+ K YS+
Sbjct: 444 RVRKLMKTKKVAKIPAYSY 462
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 153/309 (49%), Gaps = 21/309 (6%)
Query: 10 WCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVL 69
W ++M + + +A+ +L M+ P+ Y ++A F++G+ + +
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 70 KTGYFDSHVSVGCE--LIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPE 127
+ G+ CE I ++ K G+ E+A +VF++ ER + +WN ++ G
Sbjct: 145 RLGFVGDEF---CESGFITLYCKA-GEFENARKVFDENPERKLGSWNAIIGGLNHAGRAN 200
Query: 128 DSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGL--ALDLCVGCS 185
+++++F M SG PD FT+ S +C L LS+ QLH V+++ D+ + S
Sbjct: 201 EAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNS 260
Query: 186 LVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGN 245
L+DMY KC G + + +F M + NVVSW+++I GY +G EA+ F M +
Sbjct: 261 LIDMYGKC---GRMDLASHIFEEMRQRNVVSWSSMIVGYA-ANGNTLEALECFRQMREFG 316
Query: 246 VAPNGFTFSSVLKACAN--LPDFG---FGEQLHSQTIKLGLSAVNCVANSLINMYARSGR 300
V PN TF VL AC + L + G F ++ GLS C+ +++ +R G+
Sbjct: 317 VRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCI----VDLLSRDGQ 372
Query: 301 LECARKCFD 309
L+ A+K +
Sbjct: 373 LKEAKKVVE 381
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 120/228 (52%), Gaps = 17/228 (7%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSN----SLYFS 59
+R L SW +++ + +EA+ F+DM G P+++ + +C SL F
Sbjct: 180 ERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQ 239
Query: 60 VGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTR 119
+ + V + + S + + LIDM+ K CG ++ A +FE+M++RNVV+W+ M+
Sbjct: 240 LHKCVLQAKTEE---KSDIMMLNSLIDMYGK-CGRMDLASHIFEEMRQRNVVSWSSMIVG 295
Query: 120 FAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALD 179
+A G ++++ F +M G P++ T L+AC L+ GK + +++S L+
Sbjct: 296 YAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFA-MMKSEFELE 354
Query: 180 LCV---GCSLVDMYAKCAVDGSLVDSRRVFNSMP-EHNVVSWTALIAG 223
+ GC +VD+ ++ DG L ++++V MP + NV+ W L+ G
Sbjct: 355 PGLSHYGC-IVDLLSR---DGQLKEAKKVVEEMPMKPNVMVWGCLMGG 398
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 248 bits (633), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 126/357 (35%), Positives = 199/357 (55%), Gaps = 11/357 (3%)
Query: 366 IGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISG 425
+ + + +H + S +LS N+ L+ MYS CG A VF M ++N+ TW II
Sbjct: 270 LQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRC 329
Query: 426 FAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVP 485
FAK+G+ A+++F E G P+ + + AC +G +DEG HF SM +G+ P
Sbjct: 330 FAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAP 389
Query: 486 RVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMI 545
+E Y +V++ G L EA+EF+ MP++ + VW +L+ RVHGN ELG++ A+++
Sbjct: 390 SIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVV 449
Query: 546 LEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVG 605
E DP S + DV ++++K++ I V++ + +F G
Sbjct: 450 ---EFLDPTRLNKQSREGFIPVKASDVE--KESLKKRSGILHG------VKSSMQEFRAG 498
Query: 606 DTSHPQAQKIYDELDELASKIKKLGYVPNTDFVLHDVEDEQKEQYLFQHSEKIAVAFALI 665
DT+ P+ +++ L L + ++GYV T LHD++ E KE L HSE+IA A A++
Sbjct: 499 DTNLPENDELFQLLRNLKMHMVEVGYVAETRMALHDIDQESKETLLLGHSERIAFARAVL 558
Query: 666 SIPNPKPIRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGTCSCNDYW 722
+ KP + KNLRVC DCH A+K +S + GR ++ RD RFH +K+G C+C DYW
Sbjct: 559 NSAPRKPFTVIKNLRVCVDCHNALKIMSDIVGREVITRDIKRFHQMKNGACTCKDYW 615
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Query: 84 LIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTP 143
L++M+ CG A VFEKM E+N+ TW +++ FA+ G+ ED+ID+F R G P
Sbjct: 295 LLEMY-SNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIP 353
Query: 144 DRFTLTSALTACAELELLSVG-KQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDS 202
D AC L + G S G+A + SLV+MY A+ G L ++
Sbjct: 354 DGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMY---ALPGFLDEA 410
Query: 203 RRVFNSMP-EHNVVSWTALI 221
MP E NV W L+
Sbjct: 411 LEFVERMPMEPNVDVWETLM 430
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 78/178 (43%), Gaps = 10/178 (5%)
Query: 129 SIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVD 188
+ID+ M Y D L C E E L K +H + S LDL L++
Sbjct: 241 TIDILASM---NYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLE 297
Query: 189 MYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAP 248
MY+ C + ++ VF M E N+ +W +I + + +G ++A+ +F + P
Sbjct: 298 MYSNCGLAN---EAASVFEKMSEKNLETWCIIIRCFAK-NGFGEDAIDMFSRFKEEGNIP 353
Query: 249 NGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVAN--SLINMYARSGRLECA 304
+G F + AC L D G LH +++ + + SL+ MYA G L+ A
Sbjct: 354 DGQLFRGIFYACGMLGDVDEG-LLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEA 410
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 171/640 (26%), Positives = 303/640 (47%), Gaps = 113/640 (17%)
Query: 83 ELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLF--------- 133
+L++++ K G + A VF++M ERNV +WN ++ + + +++ +LF
Sbjct: 28 QLVNLYSKS-GLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCERDL 86
Query: 134 --FRMLLSGYTP-------------------------DRFTLTSALTACAELELLSVGKQ 166
+ LLSG+ D FT+T+ + A+L + G+Q
Sbjct: 87 ITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQ 146
Query: 167 LHSWVIRSGLALDLCVGCSLVDMYAKCAV------------------------------D 196
LH ++++G SL+ MY+KC +
Sbjct: 147 LHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCRE 206
Query: 197 GSLVDSRRVFNSMPEHN-VVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSS 255
G + + VF PE N +SW LIAGY + +G E+EA+++ M + + + +F +
Sbjct: 207 GDIDKALSVFWRNPELNDTISWNTLIAGYAQ-NGYEEEALKMAVSMEENGLKWDEHSFGA 265
Query: 256 VLKACANLPDFGFGEQLHSQTIK----------LGLSAVNC------------------- 286
VL ++L G+++H++ +K G+ V C
Sbjct: 266 VLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGN 325
Query: 287 --VANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN------- 337
A+S+I Y+ G++ A++ FD L EK+LV + + D L
Sbjct: 326 LYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIA 385
Query: 338 HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSK 397
+ET + S AC L + G++IH +++G + + A + MYSK
Sbjct: 386 NETNTPDSLVMVSVLGACSLQA-----YMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSK 440
Query: 398 CGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAV 457
CGN E A ++F+ +R+ + + ++I+G A HG+ K+ + F +M E G KP+++T++A+
Sbjct: 441 CGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMAL 500
Query: 458 LSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSM-PLD 516
LSAC H GL+ EG K+F SM + + P HY CM+D+ G++ L +AIE + + ++
Sbjct: 501 LSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVE 560
Query: 517 ADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIR 576
DA++ + L +C + NTEL + + +L E + + YI ++N YA+ RW ++ IR
Sbjct: 561 KDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIR 620
Query: 577 KTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIY 616
M+ K++ +G SW ++ Q H F D SH + + IY
Sbjct: 621 HQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIY 660
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 163/334 (48%), Gaps = 43/334 (12%)
Query: 6 DLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVF 65
D +SW ++++ +A N E EAL + M E+G +E+ F A L S+ +G+ V
Sbjct: 224 DTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVH 283
Query: 66 GSVLKTG-YFDSHVSVGCELIDMFVKGCGDI---ESAH---------------------- 99
VLK G Y + VS G ++D++ K CG++ ESAH
Sbjct: 284 ARVLKNGSYSNKFVSSG--IVDVYCK-CGNMKYAESAHLLYGFGNLYSASSMIVGYSSQG 340
Query: 100 ------RVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYT--PDRFTLTSA 151
R+F+ + E+N+V W M + + P DS+ R ++ T PD + S
Sbjct: 341 KMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQP-DSVLELARAFIANETNTPDSLVMVSV 399
Query: 152 LTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPE 211
L AC+ + GK++H +R+G+ +D + + VDMY+KC G++ + R+F+S E
Sbjct: 400 LGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKC---GNVEYAERIFDSSFE 456
Query: 212 HNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQ 271
+ V + A+IAG G E ++ + F DM +G P+ TF ++L AC + GE+
Sbjct: 457 RDTVMYNAMIAGCAH-HGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEK 515
Query: 272 LHSQTIK-LGLSAVNCVANSLINMYARSGRLECA 304
I+ +S +I++Y ++ RL+ A
Sbjct: 516 YFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKA 549
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 87/198 (43%), Gaps = 14/198 (7%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNE------YCFTAALRACSNSL 56
S+++LV W +M + N L L F NE + L ACS
Sbjct: 353 SEKNLVVWTAMFLGYLNLRQPDSVL-----ELARAFIANETNTPDSLVMVSVLGACSLQA 407
Query: 57 YFSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLM 116
Y G+ + G L+TG V +DM+ K CG++E A R+F+ ER+ V +N M
Sbjct: 408 YMEPGKEIHGHSLRTGILMDKKLVTA-FVDMYSK-CGNVEYAERIFDSSFERDTVMYNAM 465
Query: 117 MTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRS-G 175
+ A G+ S F M G+ PD T + L+AC L+ G++ +I +
Sbjct: 466 IAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYN 525
Query: 176 LALDLCVGCSLVDMYAKC 193
++ + ++D+Y K
Sbjct: 526 ISPETGHYTCMIDLYGKA 543
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 241 bits (616), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 151/501 (30%), Positives = 260/501 (51%), Gaps = 6/501 (1%)
Query: 94 DIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALT 153
D+ SA ++F+ ER+V WN ++ +A+ + LF ++L S PD FT
Sbjct: 55 DLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLAR 114
Query: 154 ACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHN 213
+E + +H I SGL D G ++V Y+K G +V++ ++F S+P+ +
Sbjct: 115 GFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKA---GLIVEASKLFCSIPDPD 171
Query: 214 VVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLH 273
+ W +I GY G + + LF M PN +T ++ + +H
Sbjct: 172 LALWNVMILGY-GCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVH 230
Query: 274 SQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSD 333
+ +K+ L + + V +L+NMY+R + A F+ + E LV+C +++ R N
Sbjct: 231 AFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHK 290
Query: 334 ETLNHETE-HTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALI 392
E L+ E +G A +L A + G+++H+ V++ G E ++ + +ALI
Sbjct: 291 EALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALI 350
Query: 393 SMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDV 452
MYSKCG + A+ +F + ++N++++ S+I G HG+A+ A E F E+LE G+ P+++
Sbjct: 351 DMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEI 410
Query: 453 TYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINS 512
T+ A+L C H GL+++G + F M+ G+ P+ EHY MV ++G +G L EA EF+ S
Sbjct: 411 TFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMS 470
Query: 513 MPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATY-ILLSNLYATEERWYD 571
+ D+ + +LL C VH NT L E A+ I + + Y ++LSN+YA RW +
Sbjct: 471 LQKPIDSGILGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDE 530
Query: 572 VAAIRKTMKQKKIIKEAGYSW 592
V +R + + K G SW
Sbjct: 531 VERLRDGISESYGGKLPGISW 551
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 181/371 (48%), Gaps = 9/371 (2%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
+R + W S++ +A L F +L P+ + + R S S R
Sbjct: 68 ERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRC 127
Query: 64 VFGSVLKTGY-FDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
+ G + +G FD G ++ + K G I A ++F + + ++ WN+M+ +
Sbjct: 128 IHGIAIVSGLGFDQ--ICGSAIVKAYSKA-GLIVEASKLFCSIPDPDLALWNVMILGYGC 184
Query: 123 MGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCV 182
G+ + I+LF M G+ P+ +T+ + + + LL V +H++ ++ L V
Sbjct: 185 CGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYV 244
Query: 183 GCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDML 242
GC+LV+MY++C S VFNS+ E ++V+ ++LI GY R G +EA+ LF ++
Sbjct: 245 GCALVNMYSRCMCIASACS---VFNSISEPDLVACSSLITGYSR-CGNHKEALHLFAELR 300
Query: 243 QGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLE 302
P+ + VL +CA L D G+++HS I+LGL V ++LI+MY++ G L+
Sbjct: 301 MSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLK 360
Query: 303 CARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETE-HTTGIGACSFTYACLLSGAA 361
CA F + EK++VS +++ + + TE G+ T++ LL
Sbjct: 361 CAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCC 420
Query: 362 CIGTIGKGEQI 372
G + KG++I
Sbjct: 421 HSGLLNKGQEI 431
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 177/389 (45%), Gaps = 17/389 (4%)
Query: 165 KQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGY 224
++LHS+V +S LA D L YA ++ L+ +R++F+ PE +V W ++I Y
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYA---LNDDLISARKLFDVFPERSVFLWNSIIRAY 81
Query: 225 VRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAV 284
+ Q + LF +L+ + P+ FT++ + + + D +H I GL
Sbjct: 82 AKAH-QFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFD 140
Query: 285 NCVANSLINMYARSGRLECARKCF------DLLFEKSLVSCETIVDVIVRDLNSDETLNH 338
++++ Y+++G + A K F DL ++ + +N + H
Sbjct: 141 QICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQH 200
Query: 339 ETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKC 398
+T L SG + +HA +K +++ + AL++MYS+C
Sbjct: 201 RGHQPN-----CYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRC 255
Query: 399 GNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVL 458
+A VFN + + +++ +S+I+G+++ G +AL LF E+ +G KP+ V VL
Sbjct: 256 MCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVL 315
Query: 459 SACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDAD 518
+C+ + G K +S G+ ++ + ++D+ + GLL A+ +P + +
Sbjct: 316 GSCAELSDSVSG-KEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIP-EKN 373
Query: 519 AMVWRSLLGSCRVHGNTELGEHAAKMILE 547
+ + SL+ +HG ILE
Sbjct: 374 IVSFNSLILGLGLHGFASTAFEKFTEILE 402
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 81/165 (49%), Gaps = 2/165 (1%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR 62
S+ DLV+ S+++ ++ EAL F ++ G P+ L +C+ G+
Sbjct: 269 SEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGK 328
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
V V++ G + + V LIDM+ K CG ++ A +F + E+N+V++N ++
Sbjct: 329 EVHSYVIRLG-LELDIKVCSALIDMYSK-CGLLKCAMSLFAGIPEKNIVSFNSLILGLGL 386
Query: 123 MGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQL 167
G+ + + F +L G PD T ++ L C LL+ G+++
Sbjct: 387 HGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEI 431
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 87/191 (45%), Gaps = 3/191 (1%)
Query: 370 EQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKH 429
+++H+ V KS + L Y+ + +A ++F+ +R+V W SII +AK
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKA 84
Query: 430 GYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEH 489
T L LF ++L + +P++ TY A L+ +G + + + G+
Sbjct: 85 HQFTTVLSLFSQILRSDTRPDNFTY-ACLARGFSESFDTKGLRCIHGIAIVSGLGFDQIC 143
Query: 490 YACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILERE 549
+ +V ++GL+ EA + S+P D D +W ++ G + G + ++ R
Sbjct: 144 GSAIVKAYSKAGLIVEASKLFCSIP-DPDLALWNVMILGYGCCGFWDKGINLFNLMQHR- 201
Query: 550 PHDPATYILLS 560
H P Y +++
Sbjct: 202 GHQPNCYTMVA 212
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 241 bits (614), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 179/600 (29%), Positives = 299/600 (49%), Gaps = 52/600 (8%)
Query: 1 MGSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSV 60
+GS SW +++ A L ++++ G P+ LR N Y S+
Sbjct: 15 VGSTASSNSWSTIVPALARFG-SIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSL 73
Query: 61 GRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRF 120
R + G V K G F S+ + L+ F K +E AH+VF++M + +V++WN +++ +
Sbjct: 74 CRQLHGYVTKHG-FVSNTRLSNSLMR-FYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGY 131
Query: 121 AQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLAL-D 179
Q G ++ I LF + S P+ F+ T+AL ACA L L +G +HS +++ GL +
Sbjct: 132 VQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGN 191
Query: 180 LCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFC 239
+ VG L+DMY KC G + D+ VF M E + VSW A++A R +G+ + + F
Sbjct: 192 VVVGNCLIDMYGKC---GFMDDAVLVFQHMEEKDTVSWNAIVASCSR-NGKLELGLWFFH 247
Query: 240 DMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSG 299
M PN PD N LI+ + +SG
Sbjct: 248 QM------PN--------------PD-------------------TVTYNELIDAFVKSG 268
Query: 300 RLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETE-HTTGIGACSFTYACLLS 358
A + + + S TI+ V S E T+ H++G+ ++ + +L+
Sbjct: 269 DFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLA 328
Query: 359 GAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVIT 418
A + + G IHA K G ++ + + +ALI MYSKCG + A +F M +N+I
Sbjct: 329 AVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIV 388
Query: 419 WTSIISGFAKHGYATKALELFYEM-LETGVKPNDVTYIAVLSACSHVGL-IDEGWKHFNS 476
W +ISG+A++G + +A++LF ++ E +KP+ T++ +L+ CSH + ++ +F
Sbjct: 389 WNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEM 448
Query: 477 MRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTE 536
M + + + P VEH ++ +G+ G + +A + I D + WR+LLG+C + +
Sbjct: 449 MINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLK 508
Query: 537 LGEH-AAKMI-LEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIE 594
+ AAKMI L D YI++SNLYA ERW +V IRK M++ ++KE G SWI+
Sbjct: 509 AAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWID 568
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 241 bits (614), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 146/441 (33%), Positives = 238/441 (53%), Gaps = 16/441 (3%)
Query: 143 PDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDS 202
P+ F S L C L + G ++H + L +L + LV +YA C G +
Sbjct: 92 PEIFA--SLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASC---GYAEVA 146
Query: 203 RRVFNSMPEHN--VVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKAC 260
VF+ M + + +W +LI+GY GQ ++AM L+ M + V P+ FTF VLKAC
Sbjct: 147 HEVFDRMSKRDSSPFAWNSLISGYAE-LGQYEDAMALYFQMAEDGVKPDRFTFPRVLKAC 205
Query: 261 ANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCE 320
+ GE +H +K G V N+L+ MYA+ G + AR FD++ K VS
Sbjct: 206 GGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWN 265
Query: 321 TIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKS 379
+++ + E L+ GI + +L A + + G Q+H V++
Sbjct: 266 SMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRR 322
Query: 380 GFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELF 439
G E LS+ NALI +YSK G A +F+ M +R+ ++W +IIS +K+ + L+ F
Sbjct: 323 GMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKN---SNGLKYF 379
Query: 440 YEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGR 499
+M KP+ +T+++VLS C++ G++++G + F+ M +G+ P++EHYACMV++ GR
Sbjct: 380 EQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGR 439
Query: 500 SGLLSEAIEFI-NSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYIL 558
+G++ EA I M L+A VW +LL +C +HGNT++GE AA+ + E EP + + L
Sbjct: 440 AGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFEL 499
Query: 559 LSNLYATEERWYDVAAIRKTM 579
L +Y+ +R DV +R+ M
Sbjct: 500 LIRIYSKAKRAEDVERVRQMM 520
Score = 172 bits (436), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 187/360 (51%), Gaps = 15/360 (4%)
Query: 76 SHVSVGCELIDMFVKGCGDIESAHRVFEKMQERN--VVTWNLMMTRFAQMGYPEDSIDLF 133
+++ + +L+ ++ CG E AH VF++M +R+ WN +++ +A++G ED++ L+
Sbjct: 125 NNLGISSKLVRLYAS-CGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALY 183
Query: 134 FRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKC 193
F+M G PDRFT L AC + + +G+ +H +++ G D+ V +LV MYAKC
Sbjct: 184 FQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKC 243
Query: 194 AVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTF 253
G +V +R VF+ +P + VSW +++ GY+ G EA+ +F M+Q + P+
Sbjct: 244 ---GDIVKARNVFDMIPHKDYVSWNSMLTGYLH-HGLLHEALDIFRLMVQNGIEPDKVAI 299
Query: 254 SSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFE 313
SSVL A + F G QLH I+ G+ VAN+LI +Y++ G+L A FD + E
Sbjct: 300 SSVL---ARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLE 356
Query: 314 KSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIH 373
+ VS I+ + NS+ E H T+ +LS A G + GE++
Sbjct: 357 RDTVSWNAIISAHSK--NSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLF 414
Query: 374 ALVVKS-GFETNLSINNALISMYSKCGNKEAALQ-VFNDMG-DRNVITWTSIISGFAKHG 430
+L+ K G + + ++++Y + G E A + +MG + W +++ HG
Sbjct: 415 SLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHG 474
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 122/245 (49%), Gaps = 19/245 (7%)
Query: 1 MGSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSV 60
M +D VSW SM++ + ++ + HEAL F M+++G P++ ++ L + L F
Sbjct: 255 MIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKH 311
Query: 61 GRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRF 120
GR + G V++ G + +SV LI ++ K G + A +F++M ER+ V+WN +++
Sbjct: 312 GRQLHGWVIRRG-MEWELSVANALIVLYSKR-GQLGQACFIFDQMLERDTVSWNAIISAH 369
Query: 121 AQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRS-GLALD 179
++ + + F +M + PD T S L+ CA ++ G++L S + + G+
Sbjct: 370 SK---NSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPK 426
Query: 180 LCVGCSLVDMYAKCAV---DGSLVDSRRVFNSMPEHNVVSWTALI-AGYVRGSGQ--EQE 233
+ +V++Y + + S++ + P W AL+ A Y+ G+ E
Sbjct: 427 MEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGP----TVWGALLYACYLHGNTDIGEVA 482
Query: 234 AMRLF 238
A RLF
Sbjct: 483 AQRLF 487
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 240 bits (612), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 152/457 (33%), Positives = 235/457 (51%), Gaps = 32/457 (7%)
Query: 152 LTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPE 211
++ C L+ L KQ+H+ +I GL+ L+ + + + +L + +P
Sbjct: 16 ISKCKSLQNL---KQIHAQIITIGLSHHTYPLSKLLHLSSTVCLSYAL----SILRQIPN 68
Query: 212 HNVVSWTALIAGYV--RGSGQEQEAMRLFCDMLQGN---VAPNGFTFSSVLKACANLPDF 266
+V + LI+ V S Q A L+ +L V PN FT+ S+ KA
Sbjct: 69 PSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKAS------ 122
Query: 267 GF-------GEQLHSQTIKLGLSAVN---CVANSLINMYARSGRLECARKCFDLLFEKSL 316
GF G LH+ +K L VN V +L+ YA G+L AR F+ + E L
Sbjct: 123 GFDAQWHRHGRALHAHVLKF-LEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDL 181
Query: 317 VSCETIVDVIV--RDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHA 374
+ T++ +++SDE + + + L+ A +G +G H
Sbjct: 182 ATWNTLLAAYANSEEIDSDEEV-LLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHV 240
Query: 375 LVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATK 434
V+K+ N + +LI +YSKCG A +VF++M R+V + ++I G A HG+ +
Sbjct: 241 YVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQE 300
Query: 435 ALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMV 494
+EL+ ++ G+ P+ T++ +SACSH GL+DEG + FNSM+ +G+ P+VEHY C+V
Sbjct: 301 GIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLV 360
Query: 495 DVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPA 554
D+LGRSG L EA E I MP+ +A +WRS LGS + HG+ E GE A K +L E +
Sbjct: 361 DLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSG 420
Query: 555 TYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYS 591
Y+LLSN+YA RW DV R+ MK ++ K G S
Sbjct: 421 NYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGIS 457
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 140/275 (50%), Gaps = 16/275 (5%)
Query: 40 PNEYCFTAALRACS-NSLYFSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESA 98
PNE+ + + +A ++ + GR + VLK +H + F CG + A
Sbjct: 110 PNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREA 169
Query: 99 HRVFEKMQERNVVTWNLMMTRFA---QMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTAC 155
+FE+++E ++ TWN ++ +A ++ E+ + LF RM + P+ +L + + +C
Sbjct: 170 RSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVR---PNELSLVALIKSC 226
Query: 156 AELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVV 215
A L G H +V+++ L L+ VG SL+D+Y+KC G L +R+VF+ M + +V
Sbjct: 227 ANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKC---GCLSFARKVFDEMSQRDVS 283
Query: 216 SWTALIAGY-VRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACAN--LPDFGFGEQL 272
+ A+I G V G G QE + L+ ++ + P+ TF + AC++ L D G +
Sbjct: 284 CYNAMIRGLAVHGFG--QEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGL-QIF 340
Query: 273 HSQTIKLGLSAVNCVANSLINMYARSGRLECARKC 307
+S G+ L+++ RSGRLE A +C
Sbjct: 341 NSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEEC 375
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 240 bits (612), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 126/351 (35%), Positives = 191/351 (54%), Gaps = 16/351 (4%)
Query: 372 IHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGY 431
+H + S +++S N++I MYS CG+ E AL VFN M +RN+ TW +I FAK+G
Sbjct: 203 VHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQ 262
Query: 432 ATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYA 491
A++ F + G KP+ + + AC +G ++EG HF SM +G++P +EHY
Sbjct: 263 GEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYV 322
Query: 492 CMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPH 551
+V +L G L EA+ F+ SM + D +W +L+ RVHG+ LG+ M+ E
Sbjct: 323 SLVKMLAEPGYLDEALRFVESMEPNVD--LWETLMNLSRVHGDLILGDRCQDMV---EQL 377
Query: 552 DPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQ 611
D + S + D+ K +++ K Y + GD S P+
Sbjct: 378 DASRLNKESKAGLVPVKSSDLV----KEKLQRMAKGPNYG-------IRYMAAGDISRPE 426
Query: 612 AQKIYDELDELASKIKKLGYVPNTDFVLHDVEDEQKEQYLFQHSEKIAVAFALISIPNPK 671
+++Y L L + ++GYVP + LHDV+ E K++ LF H+E+ A + P
Sbjct: 427 NRELYMALKSLKEHMIEIGYVPLSKLALHDVDQESKDENLFNHNERFAFISTFLDTPARS 486
Query: 672 PIRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGTCSCNDYW 722
IR+ KNLRVC DCH A+K +SK+ GR ++ RDA RFHH+KDG CSC +YW
Sbjct: 487 LIRVMKNLRVCADCHNALKLMSKIVGRELISRDAKRFHHMKDGVCSCREYW 537
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 81/167 (48%), Gaps = 7/167 (4%)
Query: 140 GYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSL 199
GY D L C + + L K +H ++ S D+ S+++MY+ C GS+
Sbjct: 176 GYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGC---GSV 232
Query: 200 VDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKA 259
D+ VFNSMPE N+ +W +I + + +GQ ++A+ F Q P+G F + A
Sbjct: 233 EDALTVFNSMPERNLETWCGVIRCFAK-NGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFA 291
Query: 260 CANLPDFGFGEQLHSQTIKLGLSAVNCVAN--SLINMYARSGRLECA 304
C L D G LH +++ + C+ + SL+ M A G L+ A
Sbjct: 292 CGVLGDMNEG-LLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEA 337
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 70/148 (47%), Gaps = 8/148 (5%)
Query: 76 SHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFR 135
S +S +I+M+ GCG +E A VF M ERN+ TW ++ FA+ G ED+ID F R
Sbjct: 214 SDISAYNSIIEMY-SGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSR 272
Query: 136 MLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVG--CSLVDMYAKC 193
G PD AC L ++ G LH + + C+ SLV M A+
Sbjct: 273 FKQEGNKPDGEMFKEIFFACGVLGDMNEG-LLHFESMYKEYGIIPCMEHYVSLVKMLAE- 330
Query: 194 AVDGSLVDSRRVFNSMPEHNVVSWTALI 221
G L ++ R SM E NV W L+
Sbjct: 331 --PGYLDEALRFVESM-EPNVDLWETLM 355
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 238 bits (607), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 151/501 (30%), Positives = 256/501 (51%), Gaps = 45/501 (8%)
Query: 165 KQLHSWVIRSGLALD--LCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIA 222
KQ+ S++I SGL+ LC C +L +R +F+ N + A++
Sbjct: 41 KQVQSFMIVSGLSHSHFLCFKLLRFCTLRLC----NLSYARFIFDRFSFPNTHLYAAVLT 96
Query: 223 GYVRG-SGQEQEAMRLFCDMLQGNVA-PNGFTFSSVLKACANLPDFGFGEQLHSQTIKLG 280
Y A F M+ +V PN F + VLK+ L +H+ K G
Sbjct: 97 AYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSG 156
Query: 281 LSAVNCVANSLINMYARS-GRLECARKCFDLLFEKSLVSCETIV---------------- 323
V +L++ YA S + AR+ FD + E+++VS ++
Sbjct: 157 FHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALF 216
Query: 324 -DVIVRDLNS-DETLNHETEHTTGIGACSF---------------TYACLLSGAACIGTI 366
D+ RD+ S + L T++ + A S T C+LS A GT+
Sbjct: 217 EDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTL 276
Query: 367 GKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGF 426
+ IHA + +++ ++N+L+ +Y KCGN E A VF +++ W S+I+ F
Sbjct: 277 QLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCF 336
Query: 427 AKHGYATKALELFYEMLETGV---KPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGV 483
A HG + +A+ +F EM++ + KP+ +T+I +L+AC+H GL+ +G +F+ M + G+
Sbjct: 337 ALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGI 396
Query: 484 VPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAK 543
PR+EHY C++D+LGR+G EA+E +++M + AD +W SLL +C++HG+ +L E A K
Sbjct: 397 EPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVK 456
Query: 544 MILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFH 603
++ P++ +++NLY W + RK +K + K G+S IE++N+VH+F+
Sbjct: 457 NLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFY 516
Query: 604 VGDTSHPQAQKIYDELDELAS 624
D SHP+ ++IY LD L S
Sbjct: 517 SLDKSHPETEEIYMILDSLIS 537
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 115/218 (52%), Gaps = 11/218 (5%)
Query: 93 GDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRML-LSGYTPDRFTLTSA 151
GDI +A +FE M ER+V +WN ++ Q G +++ LF RM+ P+ T+
Sbjct: 207 GDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCV 266
Query: 152 LTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPE 211
L+ACA+ L + K +H++ R L+ D+ V SLVD+Y KC G+L ++ VF +
Sbjct: 267 LSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKC---GNLEEASSVFKMASK 323
Query: 212 HNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGN---VAPNGFTFSSVLKACAN--LPDF 266
++ +W ++I + G+ +EA+ +F +M++ N + P+ TF +L AC + L
Sbjct: 324 KSLTAWNSMINCFAL-HGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSK 382
Query: 267 GFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECA 304
G G T + G+ LI++ R+GR + A
Sbjct: 383 GRG-YFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEA 419
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 6/166 (3%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDML-EHGFYPNEYCFTAALRACSNSLYFSVGR 62
+RD+ SW ++++ N + EA+ F M+ E PNE L AC+ + + +
Sbjct: 221 ERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAK 280
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
+ + S V V L+D++ K CG++E A VF+ ++++ WN M+ FA
Sbjct: 281 GIHAFAYRRD-LSSDVFVSNSLVDLYGK-CGNLEEASSVFKMASKKSLTAWNSMINCFAL 338
Query: 123 MGYPEDSIDLFFRML---LSGYTPDRFTLTSALTACAELELLSVGK 165
G E++I +F M+ ++ PD T L AC L+S G+
Sbjct: 339 HGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGR 384
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 236 bits (601), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 178/617 (28%), Positives = 293/617 (47%), Gaps = 59/617 (9%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
R+ V+W +M+S + ++A F D++ + +C + R +
Sbjct: 69 RNTVTWNTMISGYVKRREMNQARKLF-DVMPKRDVVTWNTMISGYVSCGGIRFLEEARKL 127
Query: 65 FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG 124
F + F + +I + K I A +FEKM ERN V+W+ M+T F Q G
Sbjct: 128 FDEMPSRDSFSWNT-----MISGYAKN-RRIGEALLLFEKMPERNAVSWSAMITGFCQNG 181
Query: 125 YPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGC 184
+ ++ LF +M + +P L + + + E LS +WV+ G L G
Sbjct: 182 EVDSAVVLFRKMPVKDSSP----LCALVAGLIKNERLSEA----AWVL--GQYGSLVSGR 231
Query: 185 S-LVDMYAKCAVD----GSLVDSRRVFNSMPE---------------HNVVSWTALIAGY 224
LV Y V G + +R +F+ +P+ NVVSW ++I Y
Sbjct: 232 EDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAY 291
Query: 225 VRGSGQEQEAMRLF-----CDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKL 279
++ G A LF D + N +G+ S ++ L HS
Sbjct: 292 LK-VGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSW---- 346
Query: 280 GLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHE 339
N +++ YA G +E AR F+ EK VS +I+ ++ + E ++
Sbjct: 347 ---------NMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLF 397
Query: 340 TE-HTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKC 398
+ G T LLS + + + G Q+H +VVK+ ++ ++NALI+MYS+C
Sbjct: 398 IRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVI-PDVPVHNALITMYSRC 456
Query: 399 GNKEAALQVFNDMG-DRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAV 457
G + ++F++M R VITW ++I G+A HG A++AL LF M G+ P+ +T+++V
Sbjct: 457 GEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSV 516
Query: 458 LSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDA 517
L+AC+H GL+DE F SM + + P++EHY+ +V+V G EA+ I SMP +
Sbjct: 517 LNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEP 576
Query: 518 DAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRK 577
D VW +LL +CR++ N L AA+ + EP Y+LL N+YA W + + +R
Sbjct: 577 DKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRM 636
Query: 578 TMKQKKIIKEAGYSWIE 594
M+ K+I KE G SW++
Sbjct: 637 NMESKRIKKERGSSWVD 653
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 113/475 (23%), Positives = 204/475 (42%), Gaps = 71/475 (14%)
Query: 93 GDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDR-----FT 147
G I A +FEK++ RN VTWN M++ + + + LF M P R T
Sbjct: 54 GYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVM------PKRDVVTWNT 107
Query: 148 LTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFN 207
+ S +C + L ++L + + D +++ YAK G ++ +F
Sbjct: 108 MISGYVSCGGIRFLEEARKLFDEMP----SRDSFSWNTMISGYAKNRRIG---EALLLFE 160
Query: 208 SMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLK------ACA 261
MPE N VSW+A+I G+ + +G+ A+ LF M + +P + ++K A
Sbjct: 161 KMPERNAVSWSAMITGFCQ-NGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAW 219
Query: 262 NLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLL---------- 311
L +G ++ G + N+LI Y + G++E AR FD +
Sbjct: 220 VLGQYG--------SLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGG 271
Query: 312 -----FEKSLVSCETIV-------DVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSG 359
F K++VS +++ DV+ L D+ + +T ++ ++ G
Sbjct: 272 EFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDT----------ISWNTMIDG 321
Query: 360 AACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITW 419
+ + E AL + S N ++S Y+ GN E A F +++ ++W
Sbjct: 322 YV---HVSRMEDAFALFSEMPNRDAHSW-NMMVSGYASVGNVELARHYFEKTPEKHTVSW 377
Query: 420 TSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRH 479
SII+ + K+ +A++LF M G KP+ T ++LSA + GL++
Sbjct: 378 NSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSAST--GLVNLRLGMQMHQIV 435
Query: 480 CHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGN 534
V+P V + ++ + R G + E+ + M L + + W +++G HGN
Sbjct: 436 VKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGN 490
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 235 bits (599), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 140/434 (32%), Positives = 229/434 (52%), Gaps = 38/434 (8%)
Query: 197 GSLVDS---RRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTF 253
GSL +S RVF+ + NV+ + A+I Y G E++ F M + + +T+
Sbjct: 47 GSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSL-VGPPLESLSFFSSMKSRGIWADEYTY 105
Query: 254 SSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFD---- 309
+ +LK+C++L D FG+ +H + I+ G + + ++ +Y GR+ A+K FD
Sbjct: 106 APLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSE 165
Query: 310 ---------------------------LLFEKSLVSCETIVDVIVRDLNSDETLNHETEH 342
+ E+S+VS +++ + + E L E
Sbjct: 166 RNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEM 225
Query: 343 T-TGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSG-FETNLSINNALISMYSKCGN 400
G T +L +A +G + G+ IH+ SG F+ +++ NAL+ Y K G+
Sbjct: 226 IDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGD 285
Query: 401 KEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETG-VKPNDVTYIAVLS 459
EAA +F M RNV++W ++ISG A +G ++LF M+E G V PN+ T++ VL+
Sbjct: 286 LEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLA 345
Query: 460 ACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADA 519
CS+ G ++ G + F M + R EHY MVD++ RSG ++EA +F+ +MP++A+A
Sbjct: 346 CCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANA 405
Query: 520 MVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTM 579
+W SLL +CR HG+ +L E AA +++ EP + Y+LLSNLYA E RW DV +R M
Sbjct: 406 AMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLM 465
Query: 580 KQKKIIKEAGYSWI 593
K+ ++ K G S I
Sbjct: 466 KKNRLRKSTGQSTI 479
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 159/327 (48%), Gaps = 36/327 (11%)
Query: 12 SMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVLKT 71
+M+ C++ E+L F M G + +EY + L++CS+ G+ V G +++T
Sbjct: 72 AMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRT 131
Query: 72 GY--------------------------FDSHVSVGCELIDMFVKG---CGDIESAHRVF 102
G+ FD + ++ ++G GD+E +F
Sbjct: 132 GFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLF 191
Query: 103 EKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLS 162
++M ER++V+WN M++ ++ G ++++LF M+ G+ PD T+ + L A L +L
Sbjct: 192 KQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLD 251
Query: 163 VGKQLHSWVIRSGLALD-LCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALI 221
GK +HS SGL D + VG +LVD Y K G L + +F M NVVSW LI
Sbjct: 252 TGKWIHSTAESSGLFKDFITVGNALVDFYCK---SGDLEAATAIFRKMQRRNVVSWNTLI 308
Query: 222 AGYVRGSGQEQEAMRLFCDML-QGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTI-KL 279
+G +G+ + + LF M+ +G VAPN TF VL C+ GE+L + +
Sbjct: 309 SGSAV-NGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERF 367
Query: 280 GLSAVNCVANSLINMYARSGRLECARK 306
L A +++++ +RSGR+ A K
Sbjct: 368 KLEARTEHYGAMVDLMSRSGRITEAFK 394
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 174/393 (44%), Gaps = 57/393 (14%)
Query: 84 LIDMFVKGCGDIES---AHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSG 140
L+ F+ CG + + A+RVF +Q NV+ +N M+ ++ +G P +S+ F M G
Sbjct: 38 LLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRG 97
Query: 141 YTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLV 200
D +T L +C+ L L GK +H +IR+G + +V++Y G +
Sbjct: 98 IWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTS---GGRMG 154
Query: 201 DSRRVFNSMPEHNVVSWTALIAGYV------RG------------------------SGQ 230
D+++VF+ M E NVV W +I G+ RG G+
Sbjct: 155 DAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGR 214
Query: 231 EQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGL-SAVNCVAN 289
++EA+ LFC+M+ P+ T +VL A+L G+ +HS GL V N
Sbjct: 215 DREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGN 274
Query: 290 SLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGI--- 346
+L++ Y +SG LE A F + +++VS T++ S +N + E +
Sbjct: 275 ALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLI--------SGSAVNGKGEFGIDLFDA 326
Query: 347 ----GACSFTYACLLSGAAC---IGTIGKGEQIHALVVKS-GFETNLSINNALISMYSKC 398
G + A L AC G + +GE++ L+++ E A++ + S+
Sbjct: 327 MIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRS 386
Query: 399 GNKEAALQVFNDMG-DRNVITWTSIISGFAKHG 430
G A + +M + N W S++S HG
Sbjct: 387 GRITEAFKFLKNMPVNANAAMWGSLLSACRSHG 419
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 145/330 (43%), Gaps = 45/330 (13%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR 62
S+R +VSW SM+S + + EAL F +M++ GF P+E L ++ G+
Sbjct: 195 SERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGK 254
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
+ + +G F ++VG L+D + K GD+E+A +F KMQ RNVV+WN +++ A
Sbjct: 255 WIHSTAESSGLFKDFITVGNALVDFYCK-SGDLEAATAIFRKMQRRNVVSWNTLISGSAV 313
Query: 123 MGYPEDSIDLFFRMLLSG-YTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLC 181
G E IDLF M+ G P+ T L C+ + G++L GL ++
Sbjct: 314 NGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELF------GLMME-- 365
Query: 182 VGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDM 241
+ A+ G++VD + SG+ EA + +M
Sbjct: 366 ----RFKLEARTEHYGAMVD----------------------LMSRSGRITEAFKFLKNM 399
Query: 242 LQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGL-SAVNCVANSLINMYARSGR 300
V N + S+L AC + D E + +K+ ++ N V L N+YA GR
Sbjct: 400 ---PVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVL--LSNLYAEEGR 454
Query: 301 LECARKCFDLLFEKSL---VSCETIVDVIV 327
+ K L+ + L TI DV V
Sbjct: 455 WQDVEKVRTLMKKNRLRKSTGQSTICDVSV 484
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 232 bits (591), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 173/634 (27%), Positives = 310/634 (48%), Gaps = 57/634 (8%)
Query: 12 SMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAA---LRACSNSLYFSVGRVVFGSV 68
S C ++ + +EA TF +L + +E+ ++ L C F G+ +
Sbjct: 52 SFRHCISHGQL-YEAFRTF-SLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHC 109
Query: 69 LKTGY-FDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPE 127
+ +G FDS V + F ++ A + E + + + WN+++ + + +
Sbjct: 110 ISSGLEFDS---VLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQ 166
Query: 128 DSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLV 187
+S+ ++ RM+ G D FT S + ACA L + G+ +H + S +L V +L+
Sbjct: 167 ESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALI 226
Query: 188 DMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQ--EAMRLFCDMLQGN 245
MY + G + +RR+F+ M E + VSW A+I Y + +E+ EA +L M
Sbjct: 227 SMYKRF---GKVDVARRLFDRMSERDAVSWNAIINCY---TSEEKLGEAFKLLDRMYLSG 280
Query: 246 VAPNGFTFSSV-----------------------------------LKACANLPDFGFGE 270
V + T++++ LKAC+++ +G+
Sbjct: 281 VEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGK 340
Query: 271 QLHSQTIKLGLSA--VNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVR 328
H I+ + ++ V NSLI MY+R L A F + SL + +I+
Sbjct: 341 VFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAY 400
Query: 329 DLNSDETLNHETEHT-TGIGACSFTYACLLSGAACIGTIGKGEQIHALVVK-SGFETNLS 386
+ S+ET E +G T A +L A +G + G++ H +++ ++ L
Sbjct: 401 NERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLI 460
Query: 387 INNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETG 446
+ N+L+ MY+K G AA +VF+ M R+ +T+TS+I G+ + G AL F +M +G
Sbjct: 461 LWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSG 520
Query: 447 VKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEA 506
+KP+ VT +AVLSACSH L+ EG F M H G+ R+EHY+CMVD+ R+G L +A
Sbjct: 521 IKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKA 580
Query: 507 IEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAA-KMILEREPHDPATYILLSNLYAT 565
+ +++P + + + +LL +C +HGNT +GE AA K++LE +P Y+LL+++YA
Sbjct: 581 RDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAV 640
Query: 566 EERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQV 599
W + ++ + + K ++ +E ++++
Sbjct: 641 TGSWSKLVTVKTLLSDLGVQKAHEFALMETDSEL 674
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 106/448 (23%), Positives = 202/448 (45%), Gaps = 54/448 (12%)
Query: 8 VSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGS 67
+ W ++ + N E++ + M+ G +E+ + + ++AC+ L F+ GRVV GS
Sbjct: 150 LPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGS 209
Query: 68 VLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPE 127
+ + + ++ V LI M+ K G ++ A R+F++M ER+ V+WN ++ +
Sbjct: 210 IEVSSH-RCNLYVCNALISMY-KRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLG 267
Query: 128 DSIDLFFRMLLSGYTPDRFT-----------------------------------LTSAL 152
++ L RM LSG T + + L
Sbjct: 268 EAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGL 327
Query: 153 TACAELELLSVGKQLHSWVIRS-GLALDL-CVGCSLVDMYAKCAVDGSLVDSRRVFNSMP 210
AC+ + L GK H VIRS + D+ V SL+ MY++C+ L + VF +
Sbjct: 328 KACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCS---DLRHAFIVFQQVE 384
Query: 211 EHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGE 270
+++ +W ++I+G+ E+ + L +ML PN T +S+L A + + G+
Sbjct: 385 ANSLSTWNSIISGFAYNERSEETSF-LLKEMLLSGFHPNHITLASILPLFARVGNLQHGK 443
Query: 271 QLHSQTIKLGLSAVNCVA--NSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVR 328
+ H ++ S +C+ NSL++MYA+SG + A++ FD + ++ V+ +++D R
Sbjct: 444 EFHCYILRRQ-SYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGR 502
Query: 329 DLNSDETLN-HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKS----GFET 383
+ L + +GI T +LS + + +G H L K G
Sbjct: 503 LGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREG---HWLFTKMEHVFGIRL 559
Query: 384 NLSINNALISMYSKCGNKEAALQVFNDM 411
L + ++ +Y + G + A +F+ +
Sbjct: 560 RLEHYSCMVDLYCRAGYLDKARDIFHTI 587
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 105/214 (49%), Gaps = 23/214 (10%)
Query: 7 LVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFG 66
L +W S++S FA N E +ML GF+PN + L L+ VG + G
Sbjct: 388 LSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASIL-----PLFARVGNLQHG 442
Query: 67 S-----VLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFA 121
+L+ + + + L+DM+ K G+I +A RVF+ M++R+ VT+ ++ +
Sbjct: 443 KEFHCYILRRQSYKDCLILWNSLVDMYAKS-GEIIAAKRVFDSMRKRDKVTYTSLIDGYG 501
Query: 122 QMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVG-----KQLHSWVIRSGL 176
++G E ++ F M SG PD T+ + L+AC+ L+ G K H + IR L
Sbjct: 502 RLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRL 561
Query: 177 ALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMP 210
C +VD+Y + G L +R +F+++P
Sbjct: 562 EHYSC----MVDLYCRA---GYLDKARDIFHTIP 588
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 232 bits (591), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 173/634 (27%), Positives = 310/634 (48%), Gaps = 57/634 (8%)
Query: 12 SMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAA---LRACSNSLYFSVGRVVFGSV 68
S C ++ + +EA TF +L + +E+ ++ L C F G+ +
Sbjct: 52 SFRHCISHGQL-YEAFRTF-SLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHC 109
Query: 69 LKTGY-FDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPE 127
+ +G FDS V + F ++ A + E + + + WN+++ + + +
Sbjct: 110 ISSGLEFDS---VLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQ 166
Query: 128 DSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLV 187
+S+ ++ RM+ G D FT S + ACA L + G+ +H + S +L V +L+
Sbjct: 167 ESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALI 226
Query: 188 DMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQ--EAMRLFCDMLQGN 245
MY + G + +RR+F+ M E + VSW A+I Y + +E+ EA +L M
Sbjct: 227 SMYKRF---GKVDVARRLFDRMSERDAVSWNAIINCY---TSEEKLGEAFKLLDRMYLSG 280
Query: 246 VAPNGFTFSSV-----------------------------------LKACANLPDFGFGE 270
V + T++++ LKAC+++ +G+
Sbjct: 281 VEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGK 340
Query: 271 QLHSQTIKLGLSA--VNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVR 328
H I+ + ++ V NSLI MY+R L A F + SL + +I+
Sbjct: 341 VFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAY 400
Query: 329 DLNSDETLNHETEHT-TGIGACSFTYACLLSGAACIGTIGKGEQIHALVVK-SGFETNLS 386
+ S+ET E +G T A +L A +G + G++ H +++ ++ L
Sbjct: 401 NERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLI 460
Query: 387 INNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETG 446
+ N+L+ MY+K G AA +VF+ M R+ +T+TS+I G+ + G AL F +M +G
Sbjct: 461 LWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSG 520
Query: 447 VKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEA 506
+KP+ VT +AVLSACSH L+ EG F M H G+ R+EHY+CMVD+ R+G L +A
Sbjct: 521 IKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKA 580
Query: 507 IEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAA-KMILEREPHDPATYILLSNLYAT 565
+ +++P + + + +LL +C +HGNT +GE AA K++LE +P Y+LL+++YA
Sbjct: 581 RDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAV 640
Query: 566 EERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQV 599
W + ++ + + K ++ +E ++++
Sbjct: 641 TGSWSKLVTVKTLLSDLGVQKAHEFALMETDSEL 674
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 106/448 (23%), Positives = 202/448 (45%), Gaps = 54/448 (12%)
Query: 8 VSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGS 67
+ W ++ + N E++ + M+ G +E+ + + ++AC+ L F+ GRVV GS
Sbjct: 150 LPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGS 209
Query: 68 VLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPE 127
+ + + ++ V LI M+ K G ++ A R+F++M ER+ V+WN ++ +
Sbjct: 210 IEVSSH-RCNLYVCNALISMY-KRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLG 267
Query: 128 DSIDLFFRMLLSGYTPDRFT-----------------------------------LTSAL 152
++ L RM LSG T + + L
Sbjct: 268 EAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGL 327
Query: 153 TACAELELLSVGKQLHSWVIRS-GLALDL-CVGCSLVDMYAKCAVDGSLVDSRRVFNSMP 210
AC+ + L GK H VIRS + D+ V SL+ MY++C+ L + VF +
Sbjct: 328 KACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCS---DLRHAFIVFQQVE 384
Query: 211 EHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGE 270
+++ +W ++I+G+ E+ + L +ML PN T +S+L A + + G+
Sbjct: 385 ANSLSTWNSIISGFAYNERSEETSF-LLKEMLLSGFHPNHITLASILPLFARVGNLQHGK 443
Query: 271 QLHSQTIKLGLSAVNCVA--NSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVR 328
+ H ++ S +C+ NSL++MYA+SG + A++ FD + ++ V+ +++D R
Sbjct: 444 EFHCYILRRQ-SYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGR 502
Query: 329 DLNSDETLN-HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKS----GFET 383
+ L + +GI T +LS + + +G H L K G
Sbjct: 503 LGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREG---HWLFTKMEHVFGIRL 559
Query: 384 NLSINNALISMYSKCGNKEAALQVFNDM 411
L + ++ +Y + G + A +F+ +
Sbjct: 560 RLEHYSCMVDLYCRAGYLDKARDIFHTI 587
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 105/214 (49%), Gaps = 23/214 (10%)
Query: 7 LVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFG 66
L +W S++S FA N E +ML GF+PN + L L+ VG + G
Sbjct: 388 LSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASIL-----PLFARVGNLQHG 442
Query: 67 S-----VLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFA 121
+L+ + + + L+DM+ K G+I +A RVF+ M++R+ VT+ ++ +
Sbjct: 443 KEFHCYILRRQSYKDCLILWNSLVDMYAKS-GEIIAAKRVFDSMRKRDKVTYTSLIDGYG 501
Query: 122 QMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVG-----KQLHSWVIRSGL 176
++G E ++ F M SG PD T+ + L+AC+ L+ G K H + IR L
Sbjct: 502 RLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRL 561
Query: 177 ALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMP 210
C +VD+Y + G L +R +F+++P
Sbjct: 562 EHYSC----MVDLYCRA---GYLDKARDIFHTIP 588
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 146/522 (27%), Positives = 273/522 (52%), Gaps = 33/522 (6%)
Query: 100 RVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELE 159
R+ + + +W ++ +Q ++++D++ M SG P +TS L AC ++E
Sbjct: 59 RILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKME 118
Query: 160 LLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTA 219
+ GK +H+ +++GL + V LV +Y++ G + +++ F+ + E N VSW +
Sbjct: 119 NMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRL---GYIELAKKAFDDIAEKNTVSWNS 175
Query: 220 LIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLK------ACA---NLP------ 264
L+ GY+ SG+ EA R+F + + + SS K AC+ +P
Sbjct: 176 LLHGYLE-SGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPAS 234
Query: 265 -DFGFGEQLHSQTIKLGLSAVNCVAN-------SLINMYARSGRLECARKCFDLLFEKSL 316
+ G ++ + +KL + + + ++I+ Y + G ++ A + F L+ +K
Sbjct: 235 WNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDK 294
Query: 317 VSCETIVDVIVRDLNSDETLN---HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIH 373
+ + ++ ++ + L E + I T + ++S + +G G +
Sbjct: 295 LVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVE 354
Query: 374 ALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYAT 433
+ + + G + + ++ +LI +Y K G+ A ++F+++ ++ ++++++I G +G AT
Sbjct: 355 SYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMAT 414
Query: 434 KALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACM 493
+A LF M+E + PN VT+ +LSA SH GL+ EG+K FNSM+ H + P +HY M
Sbjct: 415 EANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKD-HNLEPSADHYGIM 473
Query: 494 VDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDP 553
VD+LGR+G L EA E I SMP+ +A VW +LL + +H N E GE A ++ E DP
Sbjct: 474 VDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLET-DP 532
Query: 554 ATYIL-LSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIE 594
Y+ L+ +Y++ RW D +R ++K+KK+ K G SW+E
Sbjct: 533 TGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 107/491 (21%), Positives = 196/491 (39%), Gaps = 86/491 (17%)
Query: 6 DLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVF 65
D SW ++ + + E + ++DM G P+ + T+ LRAC G+ +
Sbjct: 68 DSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIH 127
Query: 66 GSVLKTGY--------------------------FDSHVSVGCELIDMFVKG---CGDIE 96
LK G FD + + G G+++
Sbjct: 128 AQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELD 187
Query: 97 SAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFT-LTSALTAC 155
A RVF+K+ E++ V+WNL+++ +A+ G ++ LF M L +P + L C
Sbjct: 188 EARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLK--SPASWNILIGGYVNC 245
Query: 156 AELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVV 215
E++L A+ G S + M + G + + +F M + + +
Sbjct: 246 REMKLARTYFD----------AMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKL 295
Query: 216 SWTALIAGYVRGSGQEQEAMRLFCDMLQGN--VAPNGFTFSSVLKACANLPDFGFGEQLH 273
+ A+IA Y + +G+ ++A++LF ML+ N + P+ T SSV+ A + L + FG +
Sbjct: 296 VYDAMIACYTQ-NGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVE 354
Query: 274 SQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSD 333
S + G+ + ++ SLI++Y + G A K F L +K VS
Sbjct: 355 SYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVS--------------- 399
Query: 334 ETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALIS 393
Y+ ++ G G + + +++ N+ L+S
Sbjct: 400 -------------------YSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLS 440
Query: 394 MYSKCGNKEAALQVFNDMGDRNVIT----WTSIISGFAKHGYATKALELFYEMLETGVKP 449
YS G + + FN M D N+ + ++ + G +A EL M ++P
Sbjct: 441 AYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSM---PMQP 497
Query: 450 NDVTYIAVLSA 460
N + A+L A
Sbjct: 498 NAGVWGALLLA 508
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 143/329 (43%), Gaps = 59/329 (17%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFY--PNEYCFTAALRACSNSLYFSV 60
SK+D + + +M++C+ N +AL F MLE Y P+E ++ + A S +
Sbjct: 290 SKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQ-----L 344
Query: 61 GRVVFGSVLKTGYFDSHVSV----GCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLM 116
G FG+ +++ + + + LID+++KG GD A ++F + +++ V+++ M
Sbjct: 345 GNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKG-GDFAKAFKMFSNLNKKDTVSYSAM 403
Query: 117 MTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGL 176
+ G ++ LF M+ P+ T T L+A + HS +++ G
Sbjct: 404 IMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYS-----------HSGLVQEGY 452
Query: 177 ALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNV---VSWTALIAGYVRGSGQEQE 233
KC FNSM +HN+ ++ + +G+ +E
Sbjct: 453 ---------------KC------------FNSMKDHNLEPSADHYGIMVDMLGRAGRLEE 485
Query: 234 AMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLIN 293
A L M + PN + ++L A + FGE S +KL +++ L
Sbjct: 486 AYELIKSM---PMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSH-LAM 541
Query: 294 MYARSGRLECARKCFDLLFEKSLVSCETI 322
+Y+ GR + AR D + EK L C+T+
Sbjct: 542 IYSSVGRWDDARTVRDSIKEKKL--CKTL 568
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 230 bits (586), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 137/423 (32%), Positives = 228/423 (53%), Gaps = 12/423 (2%)
Query: 205 VFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDML---QGNVAPNGFTFSSVLKACA 261
+F+S+ N + +I R S Q +R F M+ + ++AP+ TF ++ AC
Sbjct: 69 IFDSIEIPNSFVYDTMIRICSRSS-QPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACL 127
Query: 262 NLPDFGFGEQLHSQTIKLGLSAVNC-VANSLINMYARSGRLECARKCFDLLFEKSLVSCE 320
F G+Q+H +K G+ + V ++ +Y L ARK FD + + +V +
Sbjct: 128 KACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWD 187
Query: 321 TIVDVIVR-DLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVK- 378
+++ VR L S+ G+ F+ L+ A +G + +G+ IH V K
Sbjct: 188 VLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKK 247
Query: 379 SGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALEL 438
S E+++ + AL+ MY+KCG E A++VF + RNV +W ++I G+A +GYA KA+
Sbjct: 248 SWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTC 307
Query: 439 FYEM-LETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVL 497
+ E G+KP+ V + VL+AC+H G ++EG +M + + P+ EHY+C+VD++
Sbjct: 308 LERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLM 367
Query: 498 GRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREP----HDP 553
R+G L +A+ I MP+ A VW +LL CR H N ELGE A K +L+ E +
Sbjct: 368 CRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEE 427
Query: 554 ATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQ 613
A + LSN+Y + +R + + +R ++Q+ + K G+S +EV+ V KF GD SHP
Sbjct: 428 AALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSHPNLL 487
Query: 614 KIY 616
+I+
Sbjct: 488 QIH 490
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/318 (31%), Positives = 166/318 (52%), Gaps = 21/318 (6%)
Query: 12 SMMSCFANNSMEHEALVTFLDML---EHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSV 68
+M+ + +S H L FL M+ E P+ F + AC + +FSVG+ + V
Sbjct: 83 TMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWV 142
Query: 69 LKTGYF--DSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYP 126
+K G F DSHV G I + K D A +VF+++ + +VV W+++M + + G
Sbjct: 143 VKNGVFLSDSHVQTGVLRIYVEDKLLLD---ARKVFDEIPQPDVVKWDVLMNGYVRCGLG 199
Query: 127 EDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWV-IRSGLALDLCVGCS 185
+ +++F ML+ G PD F++T+ALTACA++ L+ GK +H +V +S + D+ VG +
Sbjct: 200 SEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTA 259
Query: 186 LVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDM-LQG 244
LVDMYAKC G + + VF + NV SW ALI GY G ++AM + +
Sbjct: 260 LVDMYAKC---GCIETAVEVFKKLTRRNVFSWAALIGGYA-AYGYAKKAMTCLERLERED 315
Query: 245 NVAPNGFTFSSVLKACANLPDFGFGEQ----LHSQTIKLGLSAVNCVANSLINMYARSGR 300
+ P+ VL ACA+ GF E+ L + + ++ + + ++++ R+GR
Sbjct: 316 GIKPDSVVLLGVLAACAH---GGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGR 372
Query: 301 LECARKCFDLLFEKSLVS 318
L+ A + + K L S
Sbjct: 373 LDDALNLIEKMPMKPLAS 390
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 116/246 (47%), Gaps = 9/246 (3%)
Query: 6 DLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVF 65
D+V W +M+ + + E L F +ML G P+E+ T AL AC+ + G+ +
Sbjct: 182 DVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIH 241
Query: 66 GSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGY 125
V K + +S V VG L+DM+ K CG IE+A VF+K+ RNV +W ++ +A GY
Sbjct: 242 EFVKKKSWIESDVFVGTALVDMYAK-CGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGY 300
Query: 126 PEDSIDLFFRMLLS-GYTPDRFTLTSALTACAELELLSVGKQ-LHSWVIRSGLALDLCVG 183
+ ++ R+ G PD L L ACA L G+ L + R +
Sbjct: 301 AKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHY 360
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVS-WTALIAGYVRGSGQE--QEAMRLFCD 240
+VD+ + G L D+ + MP + S W AL+ G E + A++ D
Sbjct: 361 SCIVDLMCRA---GRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLD 417
Query: 241 MLQGNV 246
+ +GNV
Sbjct: 418 LEKGNV 423
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 229 bits (585), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 126/435 (28%), Positives = 230/435 (52%), Gaps = 37/435 (8%)
Query: 217 WTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQT 276
W +I G+ S ++++ ++ ML+ + P+ T+ ++K+ + L + G LH
Sbjct: 76 WNFVIRGF-SNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSV 134
Query: 277 IKLGLSAVNCVANSLINMY-------------------------------ARSGRLECAR 305
+K GL + N+LI+MY A+SG + AR
Sbjct: 135 VKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSAR 194
Query: 306 KCFDLLFEKSLVSCETIVDVIVR--DLNSDETLNHETEHTTGIGACSFTYACLLSGAACI 363
FD + E+ +V+ +++D V+ + N + + A T ++ A +
Sbjct: 195 LVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHL 254
Query: 364 GTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVF--NDMGDRNVITWTS 421
G + +G+ +H ++ + + +LI MY+KCG+ A VF + + + + W +
Sbjct: 255 GALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNA 314
Query: 422 IISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCH 481
II G A HG+ ++L+LF++M E+ + P+++T++ +L+ACSH GL+ E W F S++
Sbjct: 315 IIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKES- 373
Query: 482 GVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHA 541
G P+ EHYACMVDVL R+GL+ +A +FI+ MP+ + +LL C HGN EL E
Sbjct: 374 GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETV 433
Query: 542 AKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHK 601
K ++E +PH+ Y+ L+N+YA +++ ++R+ M++K + K AG+S ++++ H+
Sbjct: 434 GKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHR 493
Query: 602 FHVGDTSHPQAQKIY 616
F D +H + KIY
Sbjct: 494 FIAHDKTHFHSDKIY 508
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 192/423 (45%), Gaps = 47/423 (11%)
Query: 93 GDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSAL 152
GD++ A++ K+ + WN ++ F+ PE SI ++ +ML G PD T +
Sbjct: 56 GDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLM 115
Query: 153 TACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKC------------------- 193
+ + L +G LH V++SGL DL + +L+ MY
Sbjct: 116 KSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLV 175
Query: 194 ---------AVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQ- 243
A G +V +R VF+ M E +VV+W+++I GYV+ G+ +A+ +F M++
Sbjct: 176 TWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVK-RGEYNKALEIFDQMMRM 234
Query: 244 GNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLEC 303
G+ N T SV+ ACA+L G+ +H + + L + SLI+MYA+ G +
Sbjct: 235 GSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGD 294
Query: 304 ARKCFDLLFEKSLVSCETIV-DVIVRDLNSDETLNHETE-----HTTGIGACSFTYACLL 357
A F + S+ + ++ + I+ L S + + + I T+ CLL
Sbjct: 295 AWSVF---YRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLL 351
Query: 358 SGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVI 417
+ + G + + + +SG E ++ + S+ G + A ++M +
Sbjct: 352 AACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTG 411
Query: 418 TWT-SIISGFAKHGYATKALELFYEMLETGVKP-NDVTYIAVLSACSHVGLIDEGWKHFN 475
+ ++++G HG A + +++E ++P ND Y+ + ++V I++ ++
Sbjct: 412 SMLGALLNGCINHGNLELAETVGKKLIE--LQPHNDGRYVGL----ANVYAINKQFRAAR 465
Query: 476 SMR 478
SMR
Sbjct: 466 SMR 468
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 143/286 (50%), Gaps = 38/286 (13%)
Query: 10 WCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVL 69
W ++ F+N+ +++ ++ ML G P+ + +++ S +G + SV+
Sbjct: 76 WNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVV 135
Query: 70 KTGY--------------------------FD----SHVSVGCELIDMFVKGCGDIESAH 99
K+G FD ++ ++D + K GD+ SA
Sbjct: 136 KSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKS-GDVVSAR 194
Query: 100 RVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTP-DRFTLTSALTACAEL 158
VF++M ER+VVTW+ M+ + + G ++++F +M+ G + + T+ S + ACA L
Sbjct: 195 LVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHL 254
Query: 159 ELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVF--NSMPEHNVVS 216
L+ GK +H +++ L L + + SL+DMYAKC GS+ D+ VF S+ E + +
Sbjct: 255 GALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKC---GSIGDAWSVFYRASVKETDALM 311
Query: 217 WTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACAN 262
W A+I G + G +E+++LF M + + P+ TF +L AC++
Sbjct: 312 WNAIIGG-LASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSH 356
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 134/299 (44%), Gaps = 37/299 (12%)
Query: 271 QLHSQTIKLGLSAVNCVANSLINMYA--RSGRLECARKCFDLLFEKSLVSCETIVDVIVR 328
++H+ I LGLS + ++ A SG ++ A K L + ++
Sbjct: 26 KIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSN 85
Query: 329 DLNSDETLNHETEHTT-GIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSI 387
N +++++ + G+ TY L+ ++ + G +H VVKSG E +L I
Sbjct: 86 SRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFI 145
Query: 388 NNALISMYSKCGNKEAALQVFNDMGDRNVITWTSI------------------------- 422
N LI MY ++ +A ++F++M +N++TW SI
Sbjct: 146 CNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDV 205
Query: 423 ------ISGFAKHGYATKALELFYEMLETG-VKPNDVTYIAVLSACSHVGLIDEGWKHFN 475
I G+ K G KALE+F +M+ G K N+VT ++V+ AC+H+G ++ G
Sbjct: 206 VTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHR 265
Query: 476 SMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIE-FINSMPLDADAMVWRSLLGSCRVHG 533
+ H + + ++D+ + G + +A F + + DA++W +++G HG
Sbjct: 266 YILDVHLPLTVILQ-TSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHG 323
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 5/157 (3%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHG-FYPNEYCFTAALRACSNSLYFSVG 61
S+RD+V+W SM+ + ++AL F M+ G NE + + AC++ + G
Sbjct: 201 SERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRG 260
Query: 62 RVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEK--MQERNVVTWNLMMTR 119
+ V +L + V + LIDM+ K CG I A VF + ++E + + WN ++
Sbjct: 261 KTVHRYILDV-HLPLTVILQTSLIDMYAK-CGSIGDAWSVFYRASVKETDALMWNAIIGG 318
Query: 120 FAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACA 156
A G+ +S+ LF +M S PD T L AC+
Sbjct: 319 LASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACS 355
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 127/364 (34%), Positives = 212/364 (58%), Gaps = 14/364 (3%)
Query: 269 GEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEK-SLVSCETIVDVIV 327
G Q+H+ KLG +AV + SL+ Y+ G ++ AR+ FD EK ++V ++
Sbjct: 84 GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYT 143
Query: 328 RDLNSDETLN-HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSG--FETN 384
+ NS E + + I LS A +G + GE+I++ +K +
Sbjct: 144 ENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMD 203
Query: 385 LSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEM-- 442
L++ N+L++MY K G E A ++F++ ++V T+TS+I G+A +G A ++LELF +M
Sbjct: 204 LTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKT 263
Query: 443 ----LETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLG 498
+T + PNDVT+I VL ACSH GL++EG +HF SM + + PR H+ CMVD+
Sbjct: 264 IDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFC 323
Query: 499 RSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYIL 558
RSG L +A EFIN MP+ + ++WR+LLG+C +HGN ELGE + I E + Y+
Sbjct: 324 RSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVA 383
Query: 559 LSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDE 618
LSN+YA++ W + + +R ++++++ G SWIE+ + +++F G ++ + Q + E
Sbjct: 384 LSNIYASKGMWDEKSKMRDRVRKRRM---PGKSWIELGSIINEFVSGPDNNDE-QLMMGE 439
Query: 619 LDEL 622
+ E+
Sbjct: 440 ISEV 443
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 133/254 (52%), Gaps = 16/254 (6%)
Query: 61 GRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQER-NVVTWNLMMTR 119
GR + V K G F++ + + L+ F GD++ A +VF++ E+ N+V W M++
Sbjct: 84 GRQIHALVRKLG-FNAVIQIQTSLVG-FYSSVGDVDYARQVFDETPEKQNIVLWTAMISA 141
Query: 120 FAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSG--LA 177
+ + ++I+LF RM D +T AL+ACA+L + +G++++S I+ LA
Sbjct: 142 YTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLA 201
Query: 178 LDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRL 237
+DL + SL++MY K G +R++F+ +V ++T++I GY +GQ QE++ L
Sbjct: 202 MDLTLRNSLLNMYVKS---GETEKARKLFDESMRKDVTTYTSMIFGYAL-NGQAQESLEL 257
Query: 238 F-----CDMLQGNV-APNGFTFSSVLKACANLPDFGFGEQ-LHSQTIKLGLSAVNCVANS 290
F D Q V PN TF VL AC++ G++ S + L
Sbjct: 258 FKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGC 317
Query: 291 LINMYARSGRLECA 304
+++++ RSG L+ A
Sbjct: 318 MVDLFCRSGHLKDA 331
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 110/230 (47%), Gaps = 15/230 (6%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
K+++V W +M+S + N EA+ F M + T AL AC++ +G
Sbjct: 129 KQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEE 188
Query: 64 VFG-SVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
++ S+ + +++ L++M+VK G+ E A ++F++ ++V T+ M+ +A
Sbjct: 189 IYSRSIKRKRRLAMDLTLRNSLLNMYVKS-GETEKARKLFDESMRKDVTTYTSMIFGYAL 247
Query: 123 MGYPEDSIDLFFRMLL------SGYTPDRFTLTSALTACAELELLSVGKQ-LHSWVIRSG 175
G ++S++LF +M + TP+ T L AC+ L+ GK+ S ++
Sbjct: 248 NGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYN 307
Query: 176 L-ALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMP-EHNVVSWTALIAG 223
L + GC +VD++ + G L D+ N MP + N V W L+
Sbjct: 308 LKPREAHFGC-MVDLFCRS---GHLKDAHEFINQMPIKPNTVIWRTLLGA 353
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 137/423 (32%), Positives = 228/423 (53%), Gaps = 12/423 (2%)
Query: 205 VFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDML---QGNVAPNGFTFSSVLKACA 261
+F+S+ N + +I R S Q +R F M+ + ++ P+ TF ++ AC
Sbjct: 69 IFDSIEIPNSFVYDTMIRICSRSS-QPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACL 127
Query: 262 NLPDFGFGEQLHSQTIKLGLSAVNC-VANSLINMYARSGRLECARKCFDLLFEKSLVSCE 320
F G+Q+H +K G+ + V ++ +Y L ARK FD + + +V +
Sbjct: 128 KACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWD 187
Query: 321 TIVDVIVR-DLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKS 379
+++ VR L S+ + GI F+ L+ A +G + +G+ IH V K
Sbjct: 188 VLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKK 247
Query: 380 GF-ETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALEL 438
+ E+++ + AL+ MY+KCG E A++VF + RNV +W ++I G+A +GYA KA
Sbjct: 248 RWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTC 307
Query: 439 FYEM-LETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVL 497
+ E G+KP+ V + VL+AC+H G ++EG +M +G+ P+ EHY+C+VD++
Sbjct: 308 LDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLM 367
Query: 498 GRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREP----HDP 553
R+G L +A++ I MP+ A VW +LL CR H N ELGE A + +L+ E +
Sbjct: 368 CRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEE 427
Query: 554 ATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQ 613
A + LSN+Y + +R + +R ++Q+ I K G+S +EV+ V KF GD SHP
Sbjct: 428 AALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPNLL 487
Query: 614 KIY 616
+I+
Sbjct: 488 QIH 490
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 162/317 (51%), Gaps = 19/317 (5%)
Query: 12 SMMSCFANNSMEHEALVTFLDML---EHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSV 68
+M+ + +S H L FL M+ E P+ F + AC + +FSVG+ + V
Sbjct: 83 TMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWV 142
Query: 69 LKTGYF--DSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYP 126
+K G F D HV G I + K D A +VF+++ + +VV W+++M + + G
Sbjct: 143 VKNGVFLSDGHVQTGVLRIYVEDKLLFD---ARKVFDEIPQPDVVKWDVLMNGYVRCGLG 199
Query: 127 EDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSG-LALDLCVGCS 185
+ +++F ML+ G PD F++T+ALTACA++ L+ GK +H +V + + D+ VG +
Sbjct: 200 SEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTA 259
Query: 186 LVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGN 245
LVDMYAKC G + + VF + NV SW ALI GY ++ L +
Sbjct: 260 LVDMYAKC---GCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDG 316
Query: 246 VAPNGFTFSSVLKACANLPDFGFGEQ----LHSQTIKLGLSAVNCVANSLINMYARSGRL 301
+ P+ VL ACA+ GF E+ L + + G++ + + ++++ R+GRL
Sbjct: 317 IKPDSVVLLGVLAACAH---GGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRL 373
Query: 302 ECARKCFDLLFEKSLVS 318
+ A + + K L S
Sbjct: 374 DDALDLIEKMPMKPLAS 390
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 116/246 (47%), Gaps = 9/246 (3%)
Query: 6 DLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVF 65
D+V W +M+ + + E L F +ML G P+E+ T AL AC+ + G+ +
Sbjct: 182 DVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIH 241
Query: 66 GSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGY 125
V K + +S V VG L+DM+ K CG IE+A VFEK+ RNV +W ++ +A GY
Sbjct: 242 EFVKKKRWIESDVFVGTALVDMYAK-CGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGY 300
Query: 126 PEDSIDLFFRMLLS-GYTPDRFTLTSALTACAELELLSVGK-QLHSWVIRSGLALDLCVG 183
+ + R+ G PD L L ACA L G+ L + R G+
Sbjct: 301 AKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHY 360
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVS-WTALIAGYVRGSGQE--QEAMRLFCD 240
+VD+ + G L D+ + MP + S W AL+ G E + A++ D
Sbjct: 361 SCIVDLMCRA---GRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLD 417
Query: 241 MLQGNV 246
+ +GNV
Sbjct: 418 LEKGNV 423
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 131/394 (33%), Positives = 219/394 (55%), Gaps = 4/394 (1%)
Query: 202 SRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGN-VAPNGFTFSSVLKAC 260
S VF MP N+ SW +I + R SG +++ LF M + + V P+ FT +L+AC
Sbjct: 86 SLSVFWHMPYRNIFSWNIIIGEFSR-SGFASKSIDLFLRMWRESCVRPDDFTLPLILRAC 144
Query: 261 ANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCE 320
+ + G+ +H +KLG S+ V+++L+ MY G+L ARK FD + + V
Sbjct: 145 SASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYT 204
Query: 321 TIVDVIVRDLNSDETLNHETEHT-TGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKS 379
+ V+ + L E +G S LL +G + G+ +H ++
Sbjct: 205 AMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRR 264
Query: 380 GFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELF 439
L++ NA+ MY KC + A VF +M R+VI+W+S+I G+ G + +LF
Sbjct: 265 CSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLF 324
Query: 440 YEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGR 499
EML+ G++PN VT++ VLSAC+H GL+++ W +F M+ + +VP ++HYA + D + R
Sbjct: 325 DEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQE-YNIVPELKHYASVADCMSR 383
Query: 500 SGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILL 559
+GLL EA +F+ MP+ D V ++L C+V+GN E+GE A+ +++ +P + Y+ L
Sbjct: 384 AGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTL 443
Query: 560 SNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWI 593
+ LY+ R+ + ++R+ MK+K+I K G S I
Sbjct: 444 AGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 131/259 (50%), Gaps = 7/259 (2%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDML-EHGFYPNEYCFTAALRACSNSLYFSVGRV 63
R++ SW ++ F+ + +++ FL M E P+++ LRACS S G +
Sbjct: 96 RNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAKSGDL 155
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
+ LK G F S + V L+ M+V G + A ++F+ M R+ V + M + Q
Sbjct: 156 IHVLCLKLG-FSSSLFVSSALVIMYVD-MGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQ 213
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVG 183
G + +F M SG+ D + S L AC +L L GK +H W IR L L +G
Sbjct: 214 GEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLG 273
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQ 243
++ DMY KC++ L + VF +M +V+SW++LI GY G + +LF +ML+
Sbjct: 274 NAITDMYVKCSI---LDYAHTVFVNMSRRDVISWSSLILGYGL-DGDVVMSFKLFDEMLK 329
Query: 244 GNVAPNGFTFSSVLKACAN 262
+ PN TF VL ACA+
Sbjct: 330 EGIEPNAVTFLGVLSACAH 348
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 184/412 (44%), Gaps = 30/412 (7%)
Query: 73 YFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDL 132
+ S+V + +L+ + K ++ VF M RN+ +WN+++ F++ G+ SIDL
Sbjct: 61 FLYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDL 120
Query: 133 FFRMLL-SGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYA 191
F RM S PD FTL L AC+ G +H ++ G + L V +LV MY
Sbjct: 121 FLRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYV 180
Query: 192 KCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGF 251
G L+ +R++F+ MP + V +TA+ GYV+ G+ + +F +M A +
Sbjct: 181 DM---GKLLHARKLFDDMPVRDSVLYTAMFGGYVQ-QGEAMLGLAMFREMGYSGFALDSV 236
Query: 252 TFSSVLKACANLPDFGFGEQLHSQTIK----LGLSAVNCVANSLINMYARSGRLECARKC 307
S+L AC L G+ +H I+ LGL+ + N++ +MY + L+ A
Sbjct: 237 VMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLN----LGNAITDMYVKCSILDYAHTV 292
Query: 308 FDLLFEKSLVSCETIV-------DVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGA 360
F + + ++S +++ DV++ DE L GI + T+ +LS
Sbjct: 293 FVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKE------GIEPNAVTFLGVLSAC 346
Query: 361 ACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDR-NVITW 419
A G + K L+ + L ++ S+ G E A + DM + +
Sbjct: 347 AHGGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVM 406
Query: 420 TSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSAC-SHVGLIDEG 470
+++SG +G + E+++ +KP +Y L+ S G DE
Sbjct: 407 GAVLSGCKVYGNVEVGERVARELIQ--LKPRKASYYVTLAGLYSAAGRFDEA 456
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 224 bits (571), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 163/507 (32%), Positives = 255/507 (50%), Gaps = 52/507 (10%)
Query: 124 GYPEDSIDLFFRMLLSG-YTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCV 182
G P ++ L+ + G Y P L AC + + +GK LHS I+ G+ D+ V
Sbjct: 25 GSPIQALVLYGGIRRRGVYFPGWVPLILRACACV-VPRVVLGKLLHSESIKFGVCSDVMV 83
Query: 183 GCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDML 242
G SL+ MY KC G +V +R+VF+ MPE NV +W A+I GY+ +G A LF ++
Sbjct: 84 GSSLISMYGKC---GCVVSARKVFDEMPERNVATWNAMIGGYM-SNGDAVLASGLFEEI- 138
Query: 243 QGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQ-----------TIKLGLSAVN------ 285
+V N T+ ++K + +L + ++ LG+ N
Sbjct: 139 --SVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDA 196
Query: 286 ------------CVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSD 333
V + +++ Y R G + AR F +F + LV T++ ++ SD
Sbjct: 197 RKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSD 256
Query: 334 ETL----NHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINN 389
+ + N + E G + T + +LS A G + G ++H+L+ G E N ++N
Sbjct: 257 DAIDAFFNMQGE---GYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSN 313
Query: 390 ALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKP 449
ALI MY+KCG+ E A VF + R+V S+IS A HG +ALE+F M +KP
Sbjct: 314 ALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKP 373
Query: 450 NDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEF 509
+++T+IAVL+AC H G + EG K F+ M+ V P V+H+ C++ +LGRSG L EA
Sbjct: 374 DEITFIAVLTACVHGGFLMEGLKIFSEMK-TQDVKPNVKHFGCLIHLLGRSGKLKEAYRL 432
Query: 510 INSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATY-----ILLSNLYA 564
+ M + + V +LLG+C+VH +TE+ E K I+E +Y +SNLYA
Sbjct: 433 VKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMK-IIETAGSITNSYSENHLASISNLYA 491
Query: 565 TEERWYDVAAIRKTMKQKKIIKEAGYS 591
ERW A+R M+++ + K G S
Sbjct: 492 HTERWQTAEALRVEMEKRGLEKSPGLS 518
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 148/307 (48%), Gaps = 55/307 (17%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
+++ +W M+ + NN +A F D+ P + F +L
Sbjct: 175 KNVKAWSVMLGVYVNNRKMEDARKFFEDI------PEKNAFVWSL--------------- 213
Query: 65 FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG 124
+ +GYF GD+ A +F ++ R++V WN ++ +AQ G
Sbjct: 214 ----MMSGYFR----------------IGDVHEARAIFYRVFARDLVIWNTLIAGYAQNG 253
Query: 125 YPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGC 184
Y +D+ID FF M GY PD T++S L+ACA+ L VG+++HS + G+ L+ V
Sbjct: 254 YSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSN 313
Query: 185 SLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGY-VRGSGQEQEAMRLFCDMLQ 243
+L+DMYAKC G L ++ VF S+ +V ++I+ + G G +EA+ +F M
Sbjct: 314 ALIDMYAKC---GDLENATSVFESISVRSVACCNSMISCLAIHGKG--KEALEMFSTMES 368
Query: 244 GNVAPNGFTFSSVLKACAN----LPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSG 299
++ P+ TF +VL AC + + ++ +Q +K + C LI++ RSG
Sbjct: 369 LDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGC----LIHLLGRSG 424
Query: 300 RLECARK 306
+L+ A +
Sbjct: 425 KLKEAYR 431
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 117/502 (23%), Positives = 204/502 (40%), Gaps = 75/502 (14%)
Query: 25 EALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVLKTGYFD----SHVSV 80
+ALV + + G Y + LRAC+ V RVV G +L + S V V
Sbjct: 29 QALVLYGGIRRRGVYFPGWV-PLILRACA----CVVPRVVLGKLLHSESIKFGVCSDVMV 83
Query: 81 GCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRM---- 136
G LI M+ K CG + SA +VF++M ERNV TWN M+ + G + LF +
Sbjct: 84 GSSLISMYGK-CGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCR 142
Query: 137 -------LLSGYTPDRFTLTSA--LTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLV 187
++ GY R + A L EL K + +W + G+ ++
Sbjct: 143 NTVTWIEMIKGYG-KRIEIEKARELFERMPFEL----KNVKAWSVMLGVYVN-------- 189
Query: 188 DMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVR--------------------- 226
+ + D+R+ F +PE N W+ +++GY R
Sbjct: 190 --------NRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVI 241
Query: 227 ---------GSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTI 277
+G +A+ F +M P+ T SS+L ACA G ++HS
Sbjct: 242 WNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLIN 301
Query: 278 KLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN 337
G+ V+N+LI+MYA+ G LE A F+ + +S+ C +++ + E L
Sbjct: 302 HRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALE 361
Query: 338 -HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYS 396
T + + T+ +L+ G + +G +I + + + N+ LI +
Sbjct: 362 MFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLG 421
Query: 397 KCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIA 456
+ G + A ++ +M + T + G K T+ E +++ET +
Sbjct: 422 RSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMKIIETAGSITNSYSEN 481
Query: 457 VLSACSHVGLIDEGWKHFNSMR 478
L++ S++ E W+ ++R
Sbjct: 482 HLASISNLYAHTERWQTAEALR 503
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 218 bits (556), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 121/346 (34%), Positives = 190/346 (54%), Gaps = 24/346 (6%)
Query: 269 GEQLHSQTIKLG-LSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIV 327
G +H KLG L + +L++ YA++G L ARK FD + E++ V+ ++
Sbjct: 130 GRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYC 189
Query: 328 RDLNSDETLNHETEHT-----------TGIGACSFTYACLLSGAACIGTIGKGEQIHALV 376
+ + NH +G+ T C+LS + G + G +H +
Sbjct: 190 ---SHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYI 246
Query: 377 VKSGF--ETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATK 434
K GF E ++ I AL+ MYSKCG A VF M +NV TWTS+ +G A +G +
Sbjct: 247 EKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNE 306
Query: 435 ALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMV 494
L M E+G+KPN++T+ ++LSA H+GL++EG + F SM+ GV P +EHY C+V
Sbjct: 307 TPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIV 366
Query: 495 DVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPA 554
D+LG++G + EA +FI +MP+ DA++ RSL +C ++G T +GE K +LE E D
Sbjct: 367 DLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEK 426
Query: 555 T-------YILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWI 593
Y+ LSN+ A + +W +V +RK MK+++I GYS++
Sbjct: 427 LSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 127/255 (49%), Gaps = 15/255 (5%)
Query: 60 VGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTR 119
VGR+V G V K G+ +G L+ + K GD+ A +VF++M ER VTWN M+
Sbjct: 129 VGRIVHGMVKKLGFLYESELIGTTLLHFYAKN-GDLRYARKVFDEMPERTSVTWNAMIGG 187
Query: 120 FAQMG-----YPEDSIDLFFRMLL--SGYTPDRFTLTSALTACAELELLSVGKQLHSWVI 172
+ ++ LF R SG P T+ L+A ++ LL +G +H ++
Sbjct: 188 YCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIE 247
Query: 173 RSGLA--LDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQ 230
+ G +D+ +G +LVDMY+KC G L ++ VF M NV +WT++ G +G+
Sbjct: 248 KLGFTPEVDVFIGTALVDMYSKC---GCLNNAFSVFELMKVKNVFTWTSMATGLAL-NGR 303
Query: 231 EQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFG-EQLHSQTIKLGLSAVNCVAN 289
E L M + + PN TF+S+L A ++ G E S + G++ V
Sbjct: 304 GNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYG 363
Query: 290 SLINMYARSGRLECA 304
++++ ++GR++ A
Sbjct: 364 CIVDLLGKAGRIQEA 378
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 146/325 (44%), Gaps = 25/325 (7%)
Query: 161 LSVGKQLHSWVIRSGLALDL-CVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTA 219
L VG+ +H V + G + +G +L+ YAK +G L +R+VF+ MPE V+W A
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAK---NGDLRYARKVFDEMPERTSVTWNA 183
Query: 220 LIAGYV----RGSGQEQEAMRLFCDM--LQGNVAPNGFTFSSVLKACANLPDFGFGEQLH 273
+I GY +G+ ++AM LF V P T VL A + G +H
Sbjct: 184 MIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVH 243
Query: 274 SQTIKLGLSA-VNC-VANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLN 331
KLG + V+ + +L++MY++ G L A F+L+ K++ + ++ + +
Sbjct: 244 GYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGR 303
Query: 332 SDET---LNHETEHTTGIGACSFTYACLLSGAACIGTIGKG-EQIHALVVKSGFETNLSI 387
+ET LN E +GI T+ LLS IG + +G E ++ + G +
Sbjct: 304 GNETPNLLNRMAE--SGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEH 361
Query: 388 NNALISMYSKCGNKEAALQVFNDMGDR-NVITWTSIISGFAKHGYATKALELFYEMLETG 446
++ + K G + A Q M + + I S+ + + +G E+ +LE
Sbjct: 362 YGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIE 421
Query: 447 VKPNDVT------YIAVLSACSHVG 465
+ ++ Y+A+ + +H G
Sbjct: 422 REDEKLSGSECEDYVALSNVLAHKG 446
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 103/217 (47%), Gaps = 15/217 (6%)
Query: 4 KRDLVSWCSMMSCFAN-----NSMEHEALVTF--LDMLEHGFYPNEYCFTAALRACSNSL 56
+R V+W +M+ + + N +A+V F G P + L A S +
Sbjct: 175 ERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTG 234
Query: 57 YFSVGRVVFGSVLKTGYF-DSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNL 115
+G +V G + K G+ + V +G L+DM+ K CG + +A VFE M+ +NV TW
Sbjct: 235 LLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSK-CGCLNNAFSVFELMKVKNVFTWTS 293
Query: 116 MMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQL-HSWVIRS 174
M T A G ++ +L RM SG P+ T TS L+A + L+ G +L S R
Sbjct: 294 MATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRF 353
Query: 175 GLALDL-CVGCSLVDMYAKCAVDGSLVDSRRVFNSMP 210
G+ + GC +VD+ K G + ++ + +MP
Sbjct: 354 GVTPVIEHYGC-IVDLLGKA---GRIQEAYQFILAMP 386
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 146/509 (28%), Positives = 258/509 (50%), Gaps = 17/509 (3%)
Query: 6 DLVSWCSMM--SCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
++ SW +++ + + + L TF +M E G N Y + ++ + + G
Sbjct: 176 NVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLK 235
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
+K G F+S V + L+DM+ K CG + A RVF+++ ER++V W M+ A
Sbjct: 236 THALAIKNGLFNS-VFLKTSLVDMYFK-CGKVGLARRVFDEIVERDIVVWGAMIAGLAHN 293
Query: 124 GYPEDSIDLFFRMLLS-GYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLC- 181
+++ LF M+ P+ LT+ L +++ L +GK++H+ V++S ++
Sbjct: 294 KRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPF 353
Query: 182 VGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDM 241
V L+D+Y KC G + RRVF + N +SWTAL++GY +G+ +A+R M
Sbjct: 354 VHSGLIDLYCKC---GDMASGRRVFYGSKQRNAISWTALMSGYA-ANGRFDQALRSIVWM 409
Query: 242 LQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIK-LGLSAVNCVANSLINMYARSGR 300
Q P+ T ++VL CA L G+++H +K L L V+ V SL+ MY++ G
Sbjct: 410 QQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLV-TSLMVMYSKCGV 468
Query: 301 LECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIG---ACSFTYACLL 357
E + FD L ++++ + ++D V N D E + S T +L
Sbjct: 469 PEYPIRLFDRLEQRNVKAWTAMIDCYVE--NCDLRAGIEVFRLMLLSKHRPDSVTMGRVL 526
Query: 358 SGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVI 417
+ + + + G+++H ++K FE+ ++ +I MY KCG+ +A F+ + + +
Sbjct: 527 TVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSL 586
Query: 418 TWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSM 477
TWT+II + + A+ F +M+ G PN T+ AVLS CS G +DE ++ FN M
Sbjct: 587 TWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLM 646
Query: 478 RHCHGVVPRVEHYACMVDVLGRSGLLSEA 506
+ + P EHY+ ++++L R G + EA
Sbjct: 647 LRMYNLQPSEEHYSLVIELLNRCGRVEEA 675
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 198/407 (48%), Gaps = 8/407 (1%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDML-EHGFYPNEYCFTAALRACSNSLYFSVGR 62
+RD+V W +M++ A+N + EAL F M+ E YPN T L + +G+
Sbjct: 277 ERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGK 336
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
V VLK+ + V LID++ K CGD+ S RVF ++RN ++W +M+ +A
Sbjct: 337 EVHAHVLKSKNYVEQPFVHSGLIDLYCK-CGDMASGRRVFYGSKQRNAISWTALMSGYAA 395
Query: 123 MGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCV 182
G + ++ M G+ PD T+ + L CAEL + GK++H + +++ ++ +
Sbjct: 396 NGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSL 455
Query: 183 GCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDML 242
SL+ MY+KC V + R+F+ + + NV +WTA+I YV + + +F ML
Sbjct: 456 VTSLMVMYSKCGVPEYPI---RLFDRLEQRNVKAWTAMIDCYVENCDL-RAGIEVFRLML 511
Query: 243 QGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLE 302
P+ T VL C++L G++LH +K ++ V+ +I MY + G L
Sbjct: 512 LSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLR 571
Query: 303 CARKCFDLLFEKSLVSCETIVDVI-VRDLNSDETLNHETEHTTGIGACSFTYACLLSGAA 361
A FD + K ++ I++ +L D E + G +FT+ +LS +
Sbjct: 572 SANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICS 631
Query: 362 CIGTIGKGEQIHALVVKS-GFETNLSINNALISMYSKCGNKEAALQV 407
G + + + L+++ + + + +I + ++CG E A ++
Sbjct: 632 QAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 166 bits (419), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 131/489 (26%), Positives = 237/489 (48%), Gaps = 15/489 (3%)
Query: 25 EALVTFLDMLEHGFYP-NEYCFTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCE 83
E +T LD LE P N F+A L AC G+ V + G +S+ + +
Sbjct: 93 EVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRING-LESNEFLRTK 151
Query: 84 LIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMM--TRFAQMGYPEDSIDLFFRMLLSGY 141
L+ M+ CG ++ A +VF++ NV +WN ++ T + +D + F M G
Sbjct: 152 LVHMYT-ACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGV 210
Query: 142 TPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVD 201
+ ++L++ + A L G + H+ I++GL + + SLVDMY KC G +
Sbjct: 211 DLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKC---GKVGL 267
Query: 202 SRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDML-QGNVAPNGFTFSSVLKAC 260
+RRVF+ + E ++V W A+IAG Q EA+ LF M+ + + PN +++L
Sbjct: 268 ARRVFDEIVERDIVVWGAMIAGLAHNKRQ-WEALGLFRTMISEEKIYPNSVILTTILPVL 326
Query: 261 ANLPDFGFGEQLHSQTIK-LGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSC 319
++ G+++H+ +K V + LI++Y + G + R+ F +++ +S
Sbjct: 327 GDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISW 386
Query: 320 ETIVDVIVRDLNSDETLNHET-EHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVK 378
++ + D+ L G T A +L A + I +G++IH +K
Sbjct: 387 TALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALK 446
Query: 379 SGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALEL 438
+ F N+S+ +L+ MYSKCG E +++F+ + RNV WT++I + ++ +E+
Sbjct: 447 NLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEV 506
Query: 439 FYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWK-HFNSMRHCHGVVPRVEHYACMVDVL 497
F ML + +P+ VT VL+ CS + + G + H + ++ +P V A ++ +
Sbjct: 507 FRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVS--ARIIKMY 564
Query: 498 GRSGLLSEA 506
G+ G L A
Sbjct: 565 GKCGDLRSA 573
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 173/355 (48%), Gaps = 7/355 (1%)
Query: 120 FAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALD 179
FA+ E ++ + + G + T ++ L AC + L GKQ+H + +GL +
Sbjct: 86 FARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESN 145
Query: 180 LCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYV-RGSGQEQEAMRLF 238
+ LV MY C GS+ D+++VF+ NV SW AL+ G V G + Q+ + F
Sbjct: 146 EFLRTKLVHMYTAC---GSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTF 202
Query: 239 CDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARS 298
+M + V N ++ S+V K+ A G + H+ IK GL + SL++MY +
Sbjct: 203 TEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKC 262
Query: 299 GRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN--HETEHTTGIGACSFTYACL 356
G++ AR+ FD + E+ +V ++ + + E L I S +
Sbjct: 263 GKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTI 322
Query: 357 LSGAACIGTIGKGEQIHALVVKS-GFETNLSINNALISMYSKCGNKEAALQVFNDMGDRN 415
L + + G+++HA V+KS + +++ LI +Y KCG+ + +VF RN
Sbjct: 323 LPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRN 382
Query: 416 VITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEG 470
I+WT+++SG+A +G +AL M + G +P+ VT VL C+ + I +G
Sbjct: 383 AISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQG 437
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 156/312 (50%), Gaps = 18/312 (5%)
Query: 2 GSK-RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSV 60
GSK R+ +SW ++MS +A N +AL + + M + GF P+ L C+
Sbjct: 377 GSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQ 436
Query: 61 GRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRF 120
G+ + LK F +VS+ L+ M+ K CG E R+F+++++RNV W M+ +
Sbjct: 437 GKEIHCYALK-NLFLPNVSLVTSLMVMYSK-CGVPEYPIRLFDRLEQRNVKAWTAMIDCY 494
Query: 121 AQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDL 180
+ I++F MLLS + PD T+ LT C++L+ L +GK+LH +++
Sbjct: 495 VENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIP 554
Query: 181 CVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQE-QEAMRLFC 239
V ++ MY KC G L + F+++ ++WTA+I Y G + ++A+ F
Sbjct: 555 FVSARIIKMYGKC---GDLRSANFSFDAVAVKGSLTWTAIIEAY--GCNELFRDAINCFE 609
Query: 240 DMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANS-----LINM 294
M+ PN FTF++VL C+ GF ++ + + L L N + +I +
Sbjct: 610 QMVSRGFTPNTFTFTAVLSICSQA---GFVDEAY-RFFNLMLRMYNLQPSEEHYSLVIEL 665
Query: 295 YARSGRLECARK 306
R GR+E A++
Sbjct: 666 LNRCGRVEEAQR 677
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 88/185 (47%), Gaps = 4/185 (2%)
Query: 345 GIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAA 404
GI + T++ LL ++ G+Q+H + +G E+N + L+ MY+ CG+ + A
Sbjct: 106 GIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDA 165
Query: 405 LQVFNDMGDRNVITWTSIISGFAKHGYA--TKALELFYEMLETGVKPNDVTYIAVLSACS 462
+VF++ NV +W +++ G G L F EM E GV N + V + +
Sbjct: 166 QKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFA 225
Query: 463 HVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVW 522
+ +G K +++ +G+ V +VD+ + G + A + + ++ D +VW
Sbjct: 226 GASALRQGLKT-HALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEI-VERDIVVW 283
Query: 523 RSLLG 527
+++
Sbjct: 284 GAMIA 288
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 132/412 (32%), Positives = 203/412 (49%), Gaps = 38/412 (9%)
Query: 217 WTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQT 276
+ LI Y+ +G+ + ++ LF ML +V PN TF S++KA + +G LH Q
Sbjct: 54 YNTLIRSYLT-TGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQA 112
Query: 277 IKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETL 336
+K G V S + Y G LE +RK FD + +V+C +++D R+ D
Sbjct: 113 LKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAF 172
Query: 337 NH--------ETEHTTGIGACS---------------------------FTYACLLSGAA 361
+ TT I S T+ +LS A
Sbjct: 173 EYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCA 232
Query: 362 CI--GTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITW 419
G I G+QIH V+ ++ AL+ MY K G+ E AL +F+ + D+ V W
Sbjct: 233 NFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAW 292
Query: 420 TSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRH 479
+IIS A +G +ALE+F M + V PN +T +A+L+AC+ L+D G + F+S+
Sbjct: 293 NAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICS 352
Query: 480 CHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGE 539
+ ++P EHY C+VD++GR+GLL +A FI S+P + DA V +LLG+C++H NTELG
Sbjct: 353 EYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGN 412
Query: 540 HAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYS 591
K ++ +P Y+ LS A + W + +RK M + I K YS
Sbjct: 413 TVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 127/326 (38%), Gaps = 46/326 (14%)
Query: 84 LIDMFVKGCGDIESAHRVFEKMQERNVVTW------NLMMTRFAQMGYPEDSIDLFFRML 137
L+ F+ I+ H V W N ++ + G + S+ LF ML
Sbjct: 19 LLQRFLYSSNQIKQIHTVLLTSNALVASRWKTKCVYNTLIRSYLTTGEYKTSLALFTHML 78
Query: 138 LSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAK----- 192
S P+ T S + A +S G LH ++ G D V S V Y +
Sbjct: 79 ASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLE 138
Query: 193 -----------------------CAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSG 229
C +G + + F MP +VVSWT +I G+ + G
Sbjct: 139 SSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSK-KG 197
Query: 230 QEQEAMRLFCDMLQGN---VAPNGFTFSSVLKACANLPDFG--FGEQLHSQTIKLGLSAV 284
+A+ +F +M+Q + PN TF SVL +CAN G G+Q+H + +
Sbjct: 198 LHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILT 257
Query: 285 NCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRD------LNSDETLNH 338
+ +L++MY ++G LE A FD + +K + + I+ + + L E +
Sbjct: 258 TTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKS 317
Query: 339 ETEHTTGIGACSFTYACLLSGAACIG 364
H GI + AC S +G
Sbjct: 318 SYVHPNGITLLAILTACARSKLVDLG 343
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 114/215 (53%), Gaps = 19/215 (8%)
Query: 6 DLVSWCSMMSCFANNSMEHEALVTFLDMLEHG---FYPNEYCFTAALRACSNSLYFSVGR 62
D+VSW ++++ F+ + +AL+ F +M+++ PNE F + L +C+N F G
Sbjct: 182 DVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN---FDQGG 238
Query: 63 VVFGSVLKTGYFDSH-----VSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMM 117
+ G + GY S ++G L+DM+ K GD+E A +F++++++ V WN ++
Sbjct: 239 IRLGKQIH-GYVMSKEIILTTTLGTALLDMYGKA-GDLEMALTIFDQIRDKKVCAWNAII 296
Query: 118 TRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLA 177
+ A G P+ ++++F M S P+ TL + LTACA +L+ +G QL S +
Sbjct: 297 SALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKI 356
Query: 178 LDLC--VGCSLVDMYAKCAVDGSLVDSRRVFNSMP 210
+ GC +VD+ + G LVD+ S+P
Sbjct: 357 IPTSEHYGC-VVDLIGRA---GLLVDAANFIQSLP 387
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 126/397 (31%), Positives = 197/397 (49%), Gaps = 39/397 (9%)
Query: 236 RLFCDMLQGNVAPNGFTFSSVLKACANLP--DFGFGEQLHSQTIKLGLSAVNCVANSLIN 293
R F +M + +V P+ TF V KACA D + LH Q ++ GL + N+LI
Sbjct: 101 RFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIR 160
Query: 294 MYARSGRLECARKCFDLLFEKSLVSCETIVDVIV-----------------RDLNSDETL 336
+Y+ ++ A + FD ++ +V+ ++D +V RDL S +L
Sbjct: 161 VYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSL 220
Query: 337 -------NHETEHTT--------GIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGF 381
NH E G+ + LS A G KG+ IH +
Sbjct: 221 ISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRL 280
Query: 382 ETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYE 441
+ + L+ Y+KCG + A+++F D+ + TW ++I+G A HG ++ F +
Sbjct: 281 FIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRK 340
Query: 442 MLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSG 501
M+ +G+KP+ VT+I+VL CSH GL+DE F+ MR + V ++HY CM D+LGR+G
Sbjct: 341 MVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAG 400
Query: 502 LLSEAIEFINSMPLDA----DAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYI 557
L+ EA E I MP D + W LLG CR+HGN E+ E AA + P D Y
Sbjct: 401 LIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYK 460
Query: 558 LLSNLYATEERWYDVAAIRKTM-KQKKIIKEAGYSWI 593
++ +YA ERW +V +R+ + + KK+ K G+S +
Sbjct: 461 VMVEMYANAERWEEVVKVREIIDRDKKVKKNVGFSKV 497
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 93/179 (51%), Gaps = 5/179 (2%)
Query: 84 LIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTP 143
LID VK +I A +F+ M R++V+WN +++ +AQM + ++I LF M+ G P
Sbjct: 189 LIDGLVKA-REIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKP 247
Query: 144 DRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSR 203
D + S L+ACA+ GK +H + R L +D + LVD YAKC G + +
Sbjct: 248 DNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKC---GFIDTAM 304
Query: 204 RVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACAN 262
+F + + +W A+I G G + + F M+ + P+G TF SVL C++
Sbjct: 305 EIFELCSDKTLFTWNAMITGLAM-HGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSH 362
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 155/337 (45%), Gaps = 40/337 (11%)
Query: 132 LFFRMLLSGYTPDRFTLTSALTACAELEL--LSVGKQLHSWVIRSGLALDLCVGCSLVDM 189
F M PD T ACA + L++ K LH +R GL DL +L+ +
Sbjct: 102 FFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRV 161
Query: 190 YAKCA-----------------------VDG-----SLVDSRRVFNSMPEHNVVSWTALI 221
Y+ A +DG +V +R +F+SMP ++VSW +LI
Sbjct: 162 YSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLI 221
Query: 222 AGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGL 281
+GY + +EA++LF +M+ + P+ S L ACA D+ G+ +H T + L
Sbjct: 222 SGYAQ-MNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRL 280
Query: 282 SAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETE 341
+ +A L++ YA+ G ++ A + F+L +K+L + ++ + N + T+++ +
Sbjct: 281 FIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRK 340
Query: 342 H-TTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINN--ALISMYSKC 398
++GI T+ +L G + G + + + ++S ++ N + + + + +
Sbjct: 341 MVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFD-QMRSLYDVNREMKHYGCMADLLGRA 399
Query: 399 GNKEAALQVFNDM----GDR-NVITWTSIISGFAKHG 430
G E A ++ M G+R ++ W+ ++ G HG
Sbjct: 400 GLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHG 436
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 114/228 (50%), Gaps = 17/228 (7%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
RDLVSW S++S +A + EA+ F +M+ G P+ + L AC+ S + G+ +
Sbjct: 212 RDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAI 271
Query: 65 FGSVLKTGYF-DSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
+ F DS ++ G L+D + K CG I++A +FE ++ + TWN M+T A
Sbjct: 272 HDYTKRKRLFIDSFLATG--LVDFYAK-CGFIDTAMEIFELCSDKTLFTWNAMITGLAMH 328
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCV- 182
G E ++D F +M+ SG PD T S L C+ L+ + L +RS ++ +
Sbjct: 329 GNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQ-MRSLYDVNREMK 387
Query: 183 --GCSLVDMYAKCAVDGSLVDSRRVFNSMPE-----HNVVSWTALIAG 223
GC + D+ + G + ++ + MP+ +++W+ L+ G
Sbjct: 388 HYGC-MADLLGRA---GLIEEAAEMIEQMPKDGGNREKLLAWSGLLGG 431
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 202 bits (514), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 111/351 (31%), Positives = 186/351 (52%), Gaps = 16/351 (4%)
Query: 372 IHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGY 431
+H ++ ++ NA+I MYS C + + AL+VF +M + N T ++ F +GY
Sbjct: 141 VHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGY 200
Query: 432 ATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYA 491
+A++LF E G KPN + V S C+ G + EG F +M +G+VP +EHY
Sbjct: 201 GEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYH 260
Query: 492 CMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPH 551
+ +L SG L EA+ F+ MP++ VW +L+ RVHG+ ELG+ A+++ E+
Sbjct: 261 SVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELV-EKLDA 319
Query: 552 DPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQ 611
+ + L AT+ + +K++ + Y + F D+SHPQ
Sbjct: 320 TRLDKVSSAGLVATKASDF--------VKKEPSTRSEPYFY-------STFRPVDSSHPQ 364
Query: 612 AQKIYDELDELASKIKKLGYVPNTDFVLHDVEDEQKEQYLFQHSEKIAVAFALISIPNPK 671
IY+ L L S++K++GYVP+T + + + ++ +F + E+IAV +L+
Sbjct: 365 MNIIYETLMSLRSQLKEMGYVPDTRYYRSLIMAMENKEQIFGYREEIAVVESLLKSKPRS 424
Query: 672 PIRIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGTCSCNDYW 722
I + N+R+ GDCH +K +S +TGR ++ RDA +H K+G C CN+ W
Sbjct: 425 AITLLTNIRIVGDCHDMMKLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 83/188 (44%), Gaps = 6/188 (3%)
Query: 140 GYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSL 199
GY D L C + E L + +H +I D+ ++++MY+ C S+
Sbjct: 114 GYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCC---SV 170
Query: 200 VDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKA 259
D+ +VF MPE N + ++ +V +G +EA+ LF + PNG F+ V
Sbjct: 171 DDALKVFEEMPEWNSGTLCVMMRCFV-NNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFST 229
Query: 260 CANLPDFGFGE-QLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLL-FEKSLV 317
C D G Q + + G+ +S+ M A SG L+ A + + E S+
Sbjct: 230 CTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVD 289
Query: 318 SCETIVDV 325
ET++++
Sbjct: 290 VWETLMNL 297
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 197 bits (500), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 124/415 (29%), Positives = 201/415 (48%), Gaps = 36/415 (8%)
Query: 213 NVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAP-NGFTFSSVLKACANLPDFGFGEQ 271
++S T ++ Y G ++A+ LF M P + FS LK+CA G
Sbjct: 11 KLISLTKQLSSYA-NQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGS 69
Query: 272 LHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLV----------SCET 321
+H+ ++K + V +L++MY + + ARK FD + +++ V C
Sbjct: 70 VHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGK 129
Query: 322 IVDVI----VRDLNSDET-LNHETEHTTGIGACSF-------------------TYACLL 357
+ + + D+ +E+ N + G S+ T L+
Sbjct: 130 VKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALV 189
Query: 358 SGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVI 417
S + IG ++IH+ ++ E + + + L+ Y +CG+ VF+ M DR+V+
Sbjct: 190 SACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVV 249
Query: 418 TWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSM 477
W+S+IS +A HG A AL+ F EM V P+D+ ++ VL ACSH GL DE +F M
Sbjct: 250 AWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRM 309
Query: 478 RHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTEL 537
+ +G+ +HY+C+VDVL R G EA + I +MP A W +LLG+CR +G EL
Sbjct: 310 QGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIEL 369
Query: 538 GEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSW 592
E AA+ +L EP +PA Y+LL +Y + R + +R MK+ + G SW
Sbjct: 370 AEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW 424
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 180/382 (47%), Gaps = 51/382 (13%)
Query: 7 LVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYP-NEYCFTAALRACSNSLYFSVGRVVF 65
L+S +S +AN +AL FL M P + + F+ AL++C+ + +G V
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 66 GSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGY 125
+K+ + S+ VGC L+DM+ K C + A ++F+++ +RN V WN M++ + G
Sbjct: 72 AHSVKSNFL-SNPFVGCALLDMYGK-CLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGK 129
Query: 126 PEDSIDLF-----------FRMLLSG----------------------YTPDRFTLTSAL 152
+++++L+ F ++ G + P+ TL + +
Sbjct: 130 VKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALV 189
Query: 153 TACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH 212
+AC+ + + K++HS+ R+ + + LV+ Y +C GS+V + VF+SM +
Sbjct: 190 SACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRC---GSIVYVQLVFDSMEDR 246
Query: 213 NVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKAC--ANLPDFGFGE 270
+VV+W++LI+ Y G + A++ F +M V P+ F +VLKAC A L D
Sbjct: 247 DVVAWSSLISAYAL-HGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVY 305
Query: 271 QLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKS--------LVSCETI 322
Q GL A + L+++ +R GR E A K + EK L +C
Sbjct: 306 FKRMQG-DYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNY 364
Query: 323 VDVIVRDLNSDETLNHETEHTT 344
++ + ++ + E L E E+
Sbjct: 365 GEIELAEIAARELLMVEPENPA 386
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/363 (20%), Positives = 150/363 (41%), Gaps = 49/363 (13%)
Query: 109 NVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTP-DRFTLTSALTACAELELLSVGKQL 167
+++ ++ +A G E +++LF +M S P D + AL +CA +G +
Sbjct: 11 KLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSV 70
Query: 168 HSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRG 227
H+ ++S + VGC+L+DMY KC S+ +R++F+ +P+ N V W A+I+ Y
Sbjct: 71 HAHSVKSNFLSNPFVGCALLDMYGKCL---SVSHARKLFDEIPQRNAVVWNAMISHYTH- 126
Query: 228 SGQEQEAMRLF---------------------------------CDMLQGNVAPNGFTFS 254
G+ +EA+ L+ M++ PN T
Sbjct: 127 CGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLL 186
Query: 255 SVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEK 314
+++ AC+ + F +++HS + + + + L+ Y R G + + FD + ++
Sbjct: 187 ALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDR 246
Query: 315 SLVSCETIVDVIVRDLNSDETLNHETEHTTG------IGACSFTYACLLSGAACIGTIGK 368
+V+ +++ +++ L E I + AC +G A +
Sbjct: 247 DVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALV-- 304
Query: 369 GEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVI-TWTSIISGFA 427
+ G + + L+ + S+ G E A +V M ++ TW +++
Sbjct: 305 --YFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACR 362
Query: 428 KHG 430
+G
Sbjct: 363 NYG 365
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/335 (33%), Positives = 184/335 (54%), Gaps = 13/335 (3%)
Query: 389 NALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVK 448
+ +I MYS C + + AL VFN+M RN TW ++I AK+G +A+++F +E G K
Sbjct: 147 HTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNK 206
Query: 449 PNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIE 508
P+ + AV AC +G I+EG HF SM +G+V +E Y ++++L G L EA++
Sbjct: 207 PDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALD 266
Query: 509 FINSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEER 568
F+ M ++ +W +L+ C V G ELG+ A++I + D + SN +
Sbjct: 267 FVERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELI---KKLDASRMSKESNAGLVAAK 323
Query: 569 WYDVAAIR-KTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDELDELASKIK 627
D A + K ++ ++I++ + + ++H+F GDTSH + L ++
Sbjct: 324 ASDSAMEKLKELRYCQMIRD------DPKKRMHEFRAGDTSHLGTVSAF---RSLKVQML 374
Query: 628 KLGYVPNTDFVLHDVEDEQKEQYLFQHSEKIAVAFALISIPNPKPIRIFKNLRVCGDCHT 687
+G+VP T VE+E+KE+ L S K+A A A+I+ +P+ + +N+R C D H
Sbjct: 375 DIGFVPATRVCFVTVEEEEKEEQLLFRSNKLAFAHAIINSEARRPLTVLQNMRTCIDGHN 434
Query: 688 AIKYISKVTGRVIVVRDANRFHHIKDGTCSCNDYW 722
K IS +TGR ++ RD ++H K+G CSC DYW
Sbjct: 435 TFKMISLITGRALIQRDKKKYHFYKNGVCSCKDYW 469
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 2/112 (1%)
Query: 84 LIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTP 143
+I+M+ GC + A VF +M +RN TW M+ A+ G E +ID+F R + G P
Sbjct: 149 VIEMY-SGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKP 207
Query: 144 DRFTLTSALTACAELELLSVG-KQLHSWVIRSGLALDLCVGCSLVDMYAKCA 194
D+ + AC + ++ G S G+ L + ++++M A C
Sbjct: 208 DKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACG 259
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 11/167 (6%)
Query: 140 GYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSL 199
GY D L C E+E L + +H + LD ++++MY+ C S
Sbjct: 107 GYIVDFPRLLGLAKLCGEVEALEEARVVHDCIT----PLDARSYHTVIEMYSGCR---ST 159
Query: 200 VDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKA 259
D+ VFN MP+ N +W +I + +G+ + A+ +F ++ P+ F +V A
Sbjct: 160 DDALNVFNEMPKRNSETWGTMIRCLAK-NGEGERAIDMFTRFIEEGNKPDKEIFKAVFFA 218
Query: 260 CANLPDFGFGEQLHSQTIKLGLSAVNCVAN--SLINMYARSGRLECA 304
C ++ D G LH +++ V + + ++I M A G L+ A
Sbjct: 219 CVSIGDINEG-LLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEA 264
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 126/384 (32%), Positives = 195/384 (50%), Gaps = 39/384 (10%)
Query: 249 NGFTFSSVLKACAN--LPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARK 306
+ FT+ +LKA +N P G LH T+KLG + V +L+ MY G + A K
Sbjct: 120 DSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHK 179
Query: 307 CFDLL--------------------FEKSL-----------VSCETIVDVIVRDLNSDET 335
FD + FEK+L VS TI+D R E
Sbjct: 180 VFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEA 239
Query: 336 --LNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGF-ETNLSINNALI 392
L I T +L +G + +HA V K GF ++ + N+LI
Sbjct: 240 ILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLI 299
Query: 393 SMYSKCGNKEAALQVFNDM--GDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPN 450
Y+KCG ++A + F ++ G +N+++WT++IS FA HG +A+ +F +M G+KPN
Sbjct: 300 DAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPN 359
Query: 451 DVTYIAVLSACSHVGLIDEGW-KHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEF 509
VT I+VL+ACSH GL +E + + FN+M + + + P V+HY C+VD+L R G L EA +
Sbjct: 360 RVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKI 419
Query: 510 INSMPLDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERW 569
+P++ A+VWR LLG+C V+ + EL E + ++E E Y+L+SN++ R+
Sbjct: 420 ALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRF 479
Query: 570 YDVAAIRKTMKQKKIIKEAGYSWI 593
D RK M + + K G+S +
Sbjct: 480 LDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 135/271 (49%), Gaps = 44/271 (16%)
Query: 74 FDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG--------- 124
F+SHV V L+ M++ G G++ AH+VF++M ERN VTWN+M+T +G
Sbjct: 154 FESHVYVQTALVGMYLVG-GNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFL 212
Query: 125 ----------------------YPEDSIDLFFRMLL-SGYTPDRFTLTSALTACAELELL 161
P+++I LF RM+ P+ T+ + L A L L
Sbjct: 213 EKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDL 272
Query: 162 SVGKQLHSWVIRSG-LALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMP--EHNVVSWT 218
+ +H++V + G + D+ V SL+D YAKC G + + + F +P N+VSWT
Sbjct: 273 KMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKC---GCIQSAFKFFIEIPNGRKNLVSWT 329
Query: 219 ALIAGY-VRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACAN--LPDFGFGEQLHSQ 275
+I+ + + G G +EA+ +F DM + + PN T SVL AC++ L + F E ++
Sbjct: 330 TMISAFAIHGMG--KEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTM 387
Query: 276 TIKLGLSAVNCVANSLINMYARSGRLECARK 306
+ ++ L++M R GRLE A K
Sbjct: 388 VNEYKITPDVKHYGCLVDMLRRKGRLEEAEK 418
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 106/229 (46%), Gaps = 18/229 (7%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLE-HGFYPNEYCFTAALRACSNSLYFSVGRV 63
R +VSW +++ +A EA++ F M+ PNE A L A N +
Sbjct: 218 RTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGS 277
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQ--ERNVVTWNLMMTRFA 121
V V K G+ + V LID + K CG I+SA + F ++ +N+V+W M++ FA
Sbjct: 278 VHAYVGKRGFVPCDIRVTNSLIDAYAK-CGCIQSAFKFFIEIPNGRKNLVSWTTMISAFA 336
Query: 122 QMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTAC-----AELELLSVGKQLHSWVIRSGL 176
G ++++ +F M G P+R T+ S L AC AE E L ++ V +
Sbjct: 337 IHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEF---FNTMVNEYKI 393
Query: 177 ALDLC-VGCSLVDMYAKCAVDGSLVDSRRVFNSMP-EHNVVSWTALIAG 223
D+ GC LVDM + G L ++ ++ +P E V W L+
Sbjct: 394 TPDVKHYGC-LVDMLRR---KGRLEEAEKIALEIPIEEKAVVWRMLLGA 438
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 205/428 (47%), Gaps = 42/428 (9%)
Query: 228 SGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCV 287
S ++A+ + D+L+ P+ +TF S++ G+ H Q IK G V V
Sbjct: 96 SSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPV 155
Query: 288 ANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHET------- 340
NSL++MY G L+ A+K F + ++ +VS +I+ +VR N D H+
Sbjct: 156 QNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVR--NGDVLAAHKLFDEMPDK 213
Query: 341 --------------EHTTGIGACSF-------------TYACLLSGAACIGTIGKGEQIH 373
+ G+ F T LL+ + +G +H
Sbjct: 214 NIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVH 273
Query: 374 ALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYAT 433
A ++++ +++ I+ ALI MY KC A ++F+ + RN +TW +I HG
Sbjct: 274 ASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPE 333
Query: 434 KALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACM 493
LELF M+ ++P++VT++ VL C+ GL+ +G +++ M + P H CM
Sbjct: 334 GGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCM 393
Query: 494 VDVLGRSGLLSEAIEFINSMP---LDADAMVWRSLLGSCRVHGNTELGEHAAKMILEREP 550
++ +G EA E + ++P + ++ W +LL S R GN LGE AK ++E +P
Sbjct: 394 ANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDP 453
Query: 551 HDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHVGDTSHP 610
+ Y LL N+Y+ RW DV +R+ +K++KI + G ++++ VH +G
Sbjct: 454 LNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVHGLRLG---CK 510
Query: 611 QAQKIYDE 618
+A+K++ E
Sbjct: 511 EAEKVFTE 518
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 163/374 (43%), Gaps = 60/374 (16%)
Query: 20 NSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHVS 79
+S +AL + D+L GF P+ Y F + + + G++ G +K G D +
Sbjct: 96 SSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGC-DQVLP 154
Query: 80 VGCELIDMF---------------------------VKGC---GDIESAHRVFEKMQERN 109
V L+ M+ + G GD+ +AH++F++M ++N
Sbjct: 155 VQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKN 214
Query: 110 VVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHS 169
+++WN+M++ + P SI LF M+ +G+ + TL L AC L G+ +H+
Sbjct: 215 IISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHA 274
Query: 170 WVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSG 229
+IR+ L + + +L+DMY KC G +RR+F+S+ N V+W +I + G
Sbjct: 275 SLIRTFLNSSVVIDTALIDMYGKCKEVGL---ARRIFDSLSIRNKVTWNVMILAHCL-HG 330
Query: 230 QEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQ-----TIKLGLSAV 284
+ + + LF M+ G + P+ TF VL CA G+ +S IK
Sbjct: 331 RPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQ 390
Query: 285 NCVANSLINMYARSGRLECARKCF----------------DLLFEKSLVSCETIVDVIVR 328
C+A N+Y+ +G E A + +LL T+ + I +
Sbjct: 391 WCMA----NLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAK 446
Query: 329 DLNSDETLNHETEH 342
L + LN++ H
Sbjct: 447 SLIETDPLNYKYYH 460
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 2/168 (1%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
++++SW M+S + + ++ F +M+ GF NE L AC S GR V
Sbjct: 213 KNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSV 272
Query: 65 FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG 124
S+++T + +S V + LIDM+ K C ++ A R+F+ + RN VTWN+M+ G
Sbjct: 273 HASLIRT-FLNSSVVIDTALIDMYGK-CKEVGLARRIFDSLSIRNKVTWNVMILAHCLHG 330
Query: 125 YPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVI 172
PE ++LF M+ PD T L CA L+S G+ +S ++
Sbjct: 331 RPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMV 378
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 135/520 (25%), Positives = 244/520 (46%), Gaps = 97/520 (18%)
Query: 12 SMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR--VVFGSVL 69
SM F+ M ++ L + G P+ + F ++ S GR ++F +++
Sbjct: 76 SMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIK--------SAGRFGILFQALV 127
Query: 70 -KTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPED 128
K G+F V ++DM+VK +ESA +VF+++ +R WN+M++ + + G E+
Sbjct: 128 EKLGFFKDPY-VRNVIMDMYVKH-ESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEE 185
Query: 129 SIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVD 188
+ LF M P+ + SW + ++
Sbjct: 186 ACKLFDMM------PE--------------------NDVVSWTV-------------MIT 206
Query: 189 MYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAP 248
+AK L ++R+ F+ MPE +VVSW A+++GY + +G ++A+RLF DML+ V P
Sbjct: 207 GFAKVK---DLENARKYFDRMPEKSVVSWNAMLSGYAQ-NGFTEDALRLFNDMLRLGVRP 262
Query: 249 NGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNC-VANSLINMYARSGRLECARKC 307
N T+ V+ AC+ D L + I +NC V +L++M+A+ ++ AR+
Sbjct: 263 NETTWVIVISACSFRADPSLTRSL-VKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRI 321
Query: 308 FDLL-FEKSLVSCETIVDVIVR--DLNSDETLNHETEHTTGIGACSF------------- 351
F+ L +++LV+ ++ R D++S L + S
Sbjct: 322 FNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALA 381
Query: 352 ------------------TYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALIS 393
T +LS + + G+ I + K+ + N S +LI
Sbjct: 382 IEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIF 441
Query: 394 MYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVT 453
MY++ GN A +VF++M +R+V+++ ++ + FA +G + L L +M + G++P+ VT
Sbjct: 442 MYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVT 501
Query: 454 YIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACM 493
Y +VL+AC+ GL+ EG + F S+R+ P +HYACM
Sbjct: 502 YTSVLTACNRAGLLKEGQRIFKSIRN-----PLADHYACM 536
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 158/345 (45%), Gaps = 68/345 (19%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACS----NSLYFS 59
++ +VSW +M+S +A N +AL F DML G PNE + + ACS SL S
Sbjct: 226 EKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRS 285
Query: 60 VGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKM-QERNVVTWNLMMT 118
+ +++ ++ F V L+DM K C DI+SA R+F ++ +RN+VTWN M++
Sbjct: 286 LVKLIDEKRVRLNCF-----VKTALLDMHAK-CRDIQSARRIFNELGTQRNLVTWNAMIS 339
Query: 119 RFAQMGYPEDSIDLFFRM----------LLSGYT----------------------PDRF 146
+ ++G + LF M L++GY PD
Sbjct: 340 GYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEV 399
Query: 147 TLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVF 206
T+ S L+AC + L +G + ++ ++ + L+ SL+ MYA+ G+L +++RVF
Sbjct: 400 TMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYAR---GGNLWEAKRVF 456
Query: 207 NSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDF 266
+ M E +VVS+ L + +G E + L M + P+ T++SVL AC
Sbjct: 457 DEMKERDVVSYNTLFTAFA-ANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACN----- 510
Query: 267 GFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLL 311
+ +K G + N L + YA C DLL
Sbjct: 511 ------RAGLLKEGQRIFKSIRNPLADHYA----------CMDLL 539
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 155 bits (393), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 134/496 (27%), Positives = 224/496 (45%), Gaps = 97/496 (19%)
Query: 138 LSGYTPD-RFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKC--- 193
SG + D L SAL +CA ++ G+Q+H V++SGL + + S+++MYAKC
Sbjct: 33 FSGESSDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLL 92
Query: 194 --------------------AVDG-----SLVDSRRVFNSMPEHNVVSWTALIAGYVRGS 228
VDG L D+ ++F+ MPE + VS+T LI GY + +
Sbjct: 93 ADAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQ-N 151
Query: 229 GQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVA 288
Q EAM LF +M + N T ++V+ AC++L L S IKL L V+
Sbjct: 152 NQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVS 211
Query: 289 NSLINM-------------------------------YARSGRLECARKCFDLLFEKSLV 317
+L++M Y+++G +E A + FD + EK +V
Sbjct: 212 TNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIV 271
Query: 318 SCETIVDVIVRDLNSDETLNHETEHTT-GIGACSFTYACLLSGAACIGTIGKGEQIHALV 376
S T++D +R DE L + TE G+ LLS +A KG Q+H +
Sbjct: 272 SWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTI 331
Query: 377 VKSGFE-------------------------------TNLSINNALISMYSKCGNKEAAL 405
VK GF+ +++ NALI+ + K G E A
Sbjct: 332 VKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAR 391
Query: 406 QVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETG-VKPNDVTYIAVLSACSHV 464
+VF+ D+++ +W ++ISG+A+ AL LF EM+ + VKP+ +T ++V SA S +
Sbjct: 392 EVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSL 451
Query: 465 GLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMV--W 522
G ++EG K + + + P A ++D+ + G + A+ + + + + W
Sbjct: 452 GSLEEG-KRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPW 510
Query: 523 RSLLGSCRVHGNTELG 538
+++ HG+ +L
Sbjct: 511 NAIICGSATHGHAKLA 526
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 163/344 (47%), Gaps = 50/344 (14%)
Query: 3 SKRDLVSWCSMMS-CFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVG 61
+++D+VSW +M+ C N ++ EALV + +ML G P+E L A + S+ S G
Sbjct: 266 TEKDIVSWGTMIDGCLRKNQLD-EALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKG 324
Query: 62 RVVFGSVLKTGY------------------------------FDSHVSVGCELIDMFVKG 91
+ G+++K G+ H++ LI FVK
Sbjct: 325 LQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKN 384
Query: 92 CGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYT-PDRFTLTS 150
G +E A VF++ ++++ +WN M++ +AQ P+ ++ LF M+ S PD T+ S
Sbjct: 385 -GMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVS 443
Query: 151 ALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFN--- 207
+A + L L GK+ H ++ S + + + +++DMYAKC GS+ + +F+
Sbjct: 444 VFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKC---GSIETALNIFHQTK 500
Query: 208 SMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKAC--ANLPD 265
++ + W A+I G G + A+ L+ D+ + PN TF VL AC A L +
Sbjct: 501 NISSSTISPWNAIICGSAT-HGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVE 559
Query: 266 FG---FGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARK 306
G F I+ + C ++++ ++GRLE A++
Sbjct: 560 LGKTYFESMKSDHGIEPDIKHYGC----MVDLLGKAGRLEEAKE 599
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 112/503 (22%), Positives = 204/503 (40%), Gaps = 89/503 (17%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
+R VS+ +++ +A N+ EA+ F +M G NE + ACS+ R+
Sbjct: 135 ERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRM 194
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
+ +K + V V L+ M+ C ++ A ++F++M ERN+VTWN+M+ +++
Sbjct: 195 LQSLAIKLK-LEGRVFVSTNLLHMYCL-CLCLKDARKLFDEMPERNLVTWNVMLNGYSKA 252
Query: 124 GYPEDSIDLF-------------------------------FRMLLSGYTPDRFTLTSAL 152
G E + +LF ML G P + L
Sbjct: 253 GLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLL 312
Query: 153 TACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYA-----KCAV------------ 195
+A A S G QLH +++ G + +++ YA K A+
Sbjct: 313 SASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIA 372
Query: 196 -----------DGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQG 244
+G + +R VF+ + ++ SW A+I+GY + S Q A+ LF +M+
Sbjct: 373 SRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQ-SLSPQLALHLFREMISS 431
Query: 245 N-VAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLEC 303
+ V P+ T SV A ++L G++ H + + + ++I+MYA+ G +E
Sbjct: 432 SQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIET 491
Query: 304 ARKCFDLLFEKSLVSCETIVD--------------VIVRDLNSDETLNHETEHTTGIGAC 349
A ++ + +S TI + DL SD + I
Sbjct: 492 A---LNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSD-------LQSLPIKPN 541
Query: 350 SFTYACLLSGAACIGTIGKGEQ-IHALVVKSGFETNLSINNALISMYSKCGNKEAALQVF 408
S T+ +LS G + G+ ++ G E ++ ++ + K G E A ++
Sbjct: 542 SITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMI 601
Query: 409 NDMGDR-NVITWTSIISGFAKHG 430
M + +V+ W ++S HG
Sbjct: 602 KKMPVKADVMIWGMLLSASRTHG 624
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 197/426 (46%), Gaps = 44/426 (10%)
Query: 152 LTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPE 211
L C+ L KQ+H+ +I+ L D + L+ + + G + VFN +
Sbjct: 27 LRTCSNFSQL---KQIHTKIIKHNLTNDQLLVRQLISVSSSF---GETQYASLVFNQLQS 80
Query: 212 HNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAP-NGFTFSSVLKACANLPDFGFGE 270
+ +W +I + + + +EA+ LF M+ + + + FTF V+KAC G
Sbjct: 81 PSTFTWNLMIRS-LSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGT 139
Query: 271 QLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETI-------- 322
Q+H IK G N+L+++Y + G+ + RK FD + +S+VS T+
Sbjct: 140 QVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNS 199
Query: 323 -----------------------VDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLS 358
+ V++ DE + FT LL
Sbjct: 200 QLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQ 259
Query: 359 GAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVIT 418
+ +G++ G +H K+GF + + ALI MYSKCG+ + A +VF+ M +++ T
Sbjct: 260 ASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLAT 319
Query: 419 WTSIISGFAKHGYATKALELFYEMLETG-VKPNDVTYIAVLSACSHVGLIDEGWKHFNSM 477
W S+I+ HG +AL LF EM E V+P+ +T++ VLSAC++ G + +G ++F M
Sbjct: 320 WNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRM 379
Query: 478 RHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCRVHGNTEL 537
+G+ P EH ACM+ +L ++ + +A + SM D D + S G+ G E
Sbjct: 380 IQVYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPD---FNSSFGNEYTDGMNET 436
Query: 538 GEHAAK 543
E ++
Sbjct: 437 NETPSQ 442
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 157/311 (50%), Gaps = 42/311 (13%)
Query: 9 SWCSMMSCFANNSMEHEALVTF-LDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGS 67
+W M+ + N EAL+ F L M+ H +++ F ++AC S +G V G
Sbjct: 85 TWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGL 144
Query: 68 VLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQ--------------------- 106
+K G+F+ V L+D++ K CG +S +VF+KM
Sbjct: 145 AIKAGFFND-VFFQNTLMDLYFK-CGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLD 202
Query: 107 ----------ERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACA 156
RNVV+W M+T + + P+++ LF RM + P+ FT+ + L A
Sbjct: 203 SAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQAST 262
Query: 157 ELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVS 216
+L LS+G+ +H + ++G LD +G +L+DMY+KC GSL D+R+VF+ M ++ +
Sbjct: 263 QLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKC---GSLQDARKVFDVMQGKSLAT 319
Query: 217 WTALIAGY-VRGSGQEQEAMRLF-CDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHS 274
W ++I V G G +EA+ LF + +V P+ TF VL ACAN + G + +
Sbjct: 320 WNSMITSLGVHGCG--EEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFT 377
Query: 275 QTIKL-GLSAV 284
+ I++ G+S +
Sbjct: 378 RMIQVYGISPI 388
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 164/352 (46%), Gaps = 37/352 (10%)
Query: 49 LRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQER 108
LR CSN FS + + ++K + + V +LI + G+ + A VF ++Q
Sbjct: 27 LRTCSN---FSQLKQIHTKIIKHNLTNDQLLVR-QLISV-SSSFGETQYASLVFNQLQSP 81
Query: 109 NVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTP-DRFTLTSALTACAELELLSVGKQL 167
+ TWNLM+ + P +++ LF M++S + D+FT + AC + +G Q+
Sbjct: 82 STFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQV 141
Query: 168 HSWVIRSGLALDLCVGCSLVDMYAKCA---------------------------VDGSLV 200
H I++G D+ +L+D+Y KC V S +
Sbjct: 142 HGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQL 201
Query: 201 DSRR-VFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKA 259
DS VFN MP NVVSWTA+I YV+ + EA +LF M +V PN FT ++L+A
Sbjct: 202 DSAEIVFNQMPMRNVVSWTAMITAYVKNR-RPDEAFQLFRRMQVDDVKPNEFTIVNLLQA 260
Query: 260 CANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSC 319
L G +H K G + +LI+MY++ G L+ ARK FD++ KSL +
Sbjct: 261 STQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATW 320
Query: 320 ETIVDVIVRDLNSDETLN--HETEHTTGIGACSFTYACLLSGAACIGTIGKG 369
+++ + +E L+ E E + + T+ +LS A G + G
Sbjct: 321 NSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDG 372
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 138/320 (43%), Gaps = 52/320 (16%)
Query: 254 SSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFE 313
S L+ C+N +Q+H++ IK L+ + LI++ + G + A F+ L
Sbjct: 24 SYFLRTCSNFSQL---KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQS 80
Query: 314 KSLVSCETIVDVIVRDLNSDETL--------NHETEHTTGIGACSFTYACLLSGAACIGT 365
S + ++ + + E L +H+++ FT+ ++ +
Sbjct: 81 PSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFD------KFTFPFVIKACLASSS 134
Query: 366 IGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQ------------------- 406
I G Q+H L +K+GF ++ N L+ +Y KCG ++ +
Sbjct: 135 IRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYG 194
Query: 407 ------------VFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTY 454
VFN M RNV++WT++I+ + K+ +A +LF M VKPN+ T
Sbjct: 195 LVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTI 254
Query: 455 IAVLSACSHVGLIDEG-WKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSM 513
+ +L A + +G + G W H H +G V ++D+ + G L +A + + M
Sbjct: 255 VNLLQASTQLGSLSMGRWVH--DYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVM 312
Query: 514 PLDADAMVWRSLLGSCRVHG 533
+ A W S++ S VHG
Sbjct: 313 QGKSLA-TWNSMITSLGVHG 331
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 76/153 (49%), Gaps = 3/153 (1%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
R++VSW +M++ + N EA F M PNE+ L+A + S+GR V
Sbjct: 214 RNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWV 273
Query: 65 FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG 124
K G F +G LIDM+ K CG ++ A +VF+ MQ +++ TWN M+T G
Sbjct: 274 HDYAHKNG-FVLDCFLGTALIDMYSK-CGSLQDARKVFDVMQGKSLATWNSMITSLGVHG 331
Query: 125 YPEDSIDLF-FRMLLSGYTPDRFTLTSALTACA 156
E+++ LF + PD T L+ACA
Sbjct: 332 CGEEALSLFEEMEEEASVEPDAITFVGVLSACA 364
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 76/109 (69%)
Query: 614 KIYDELDELASKIKKLGYVPNTDFVLHDVEDEQKEQYLFQHSEKIAVAFALISIPNPKPI 673
K Y +L L +++ GYVP T +VLHD+++E KE+ L HSE++A+AF +I+ P I
Sbjct: 131 KAYVKLKSLGKEVRDAGYVPETKYVLHDIDEEAKEKALMHHSERLAIAFGIINTPPGTTI 190
Query: 674 RIFKNLRVCGDCHTAIKYISKVTGRVIVVRDANRFHHIKDGTCSCNDYW 722
R+ KNLR+CGDCH IK +S + R I+VRD RFHH +DG CSC DYW
Sbjct: 191 RVMKNLRICGDCHNFIKILSSIEDREIIVRDNKRFHHFRDGNCSCGDYW 239
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 111/179 (62%), Gaps = 6/179 (3%)
Query: 91 GCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTS 150
G G++E A +F +M +++++W M+ ++Q ++I +F++M+ G PD T+++
Sbjct: 978 GLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMST 1037
Query: 151 ALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMP 210
++ACA L +L +GK++H + +++G LD+ +G +LVDMY+KC GSL + VF ++P
Sbjct: 1038 VISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKC---GSLERALLVFFNLP 1094
Query: 211 EHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKAC--ANLPDFG 267
+ N+ W ++I G + G QEA+++F M +V PN TF SV AC A L D G
Sbjct: 1095 KKNLFCWNSIIEG-LAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEG 1152
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/415 (20%), Positives = 176/415 (42%), Gaps = 72/415 (17%)
Query: 82 CELIDMFVKGCGD---IESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLL 138
C L++ F+ C ++ A +MQE NV +N + F +P S++L+ RML
Sbjct: 805 CRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLR 864
Query: 139 SGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGS 198
+P +T +S + A + Q H W + G + + +L+D Y+ G
Sbjct: 865 DSVSPSSYTYSSLVKASSFASRFGESLQAHIW--KFGFGFHVKIQTTLIDFYSAT---GR 919
Query: 199 LVDSRRVFNSMPEHNVVSWTALIAGYVR------------------------------GS 228
+ ++R+VF+ MPE + ++WT +++ Y R G
Sbjct: 920 IREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGL 979
Query: 229 GQEQEAMRLFCD-------------------------------MLQGNVAPNGFTFSSVL 257
G ++A LF M++ + P+ T S+V+
Sbjct: 980 GNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVI 1039
Query: 258 KACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLV 317
ACA+L G+++H T++ G + ++L++MY++ G LE A F L +K+L
Sbjct: 1040 SACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLF 1099
Query: 318 SCETIVDVIVRDLNSDETLNHETE-HTTGIGACSFTYACLLSGAACIGTIGKGEQIH-AL 375
+I++ + + E L + + + T+ + + G + +G +I+ ++
Sbjct: 1100 CWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSM 1159
Query: 376 VVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMG-DRNVITWTSIISGFAKH 429
+ +N+ ++ ++SK G AL++ +M + N + W +++ G H
Sbjct: 1160 IDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIH 1214
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 114/221 (51%), Gaps = 7/221 (3%)
Query: 5 RDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVV 64
+D++SW +M+ ++ N EA+ F M+E G P+E + + AC++ +G+ V
Sbjct: 995 KDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEV 1054
Query: 65 FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG 124
L+ G F V +G L+DM+ K CG +E A VF + ++N+ WN ++ A G
Sbjct: 1055 HMYTLQNG-FVLDVYIGSALVDMYSK-CGSLERALLVFFNLPKKNLFCWNSIIEGLAAHG 1112
Query: 125 YPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRS-GLALDLCVG 183
+ ++++ +F +M + P+ T S TAC L+ G++++ +I + ++
Sbjct: 1113 FAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHY 1172
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSMP-EHNVVSWTALIAG 223
+V +++K G + ++ + +M E N V W AL+ G
Sbjct: 1173 GGMVHLFSKA---GLIYEALELIGNMEFEPNAVIWGALLDG 1210
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 116/276 (42%), Gaps = 69/276 (25%)
Query: 346 IGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAAL 405
+ S+TY+ L+ ++ G+ Q H + K GF ++ I LI YS G A
Sbjct: 867 VSPSSYTYSSLVKASSFASRFGESLQAH--IWKFGFGFHVKIQTTLIDFYSATGRIREAR 924
Query: 406 QVFNDMGDRNVITWTSIISGFAK--------------------------HGYA-----TK 434
+VF++M +R+ I WT+++S + + +GY +
Sbjct: 925 KVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQ 984
Query: 435 ALELFYEM-------------------------------LETGVKPNDVTYIAVLSACSH 463
A LF +M +E G+ P++VT V+SAC+H
Sbjct: 985 AESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAH 1044
Query: 464 VGLIDEGWK-HFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVW 522
+G+++ G + H +++ +G V V + +VD+ + G L A+ ++P + W
Sbjct: 1045 LGVLEIGKEVHMYTLQ--NGFVLDVYIGSALVDMYSKCGSLERALLVFFNLP-KKNLFCW 1101
Query: 523 RSLLGSCRVHG-NTELGEHAAKMILEREPHDPATYI 557
S++ HG E + AKM +E + T++
Sbjct: 1102 NSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFV 1137
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 70/166 (42%), Gaps = 14/166 (8%)
Query: 370 EQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKH 429
E A ++K+ + + N I+ + + A+ M + NV + ++ GF
Sbjct: 790 ESALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTC 849
Query: 430 GYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEG-----WKHFNSMRHCHGVV 484
+ ++LEL+ ML V P+ TY +++ A S E WK G
Sbjct: 850 SHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAHIWK--------FGFG 901
Query: 485 PRVEHYACMVDVLGRSGLLSEAIEFINSMPLDADAMVWRSLLGSCR 530
V+ ++D +G + EA + + MP + D + W +++ + R
Sbjct: 902 FHVKIQTTLIDFYSATGRIREARKVFDEMP-ERDDIAWTTMVSAYR 946
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 108/185 (58%), Gaps = 7/185 (3%)
Query: 88 FVKG---CGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPD 144
+KG G++ A ++FE M E+NVV+W ++ F+Q G E +I +F ML G P+
Sbjct: 233 LIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPN 292
Query: 145 RFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRR 204
+T+ + L+AC++ L G ++H +++ +G+ LD +G +LVDMYAKC G L +
Sbjct: 293 EYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKC---GELDCAAT 349
Query: 205 VFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLP 264
VF++M +++SWTA+I G+ G+ +A++ F M+ P+ F +VL AC N
Sbjct: 350 VFSNMNHKDILSWTAMIQGWAV-HGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSS 408
Query: 265 DFGFG 269
+ G
Sbjct: 409 EVDLG 413
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 176/393 (44%), Gaps = 46/393 (11%)
Query: 142 TPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKC-AVDGSLV 200
+PD S + AC + L + +H+ ++R G+ L V LV + + D SL
Sbjct: 26 SPDESHFISLIHACKDTASL---RHVHAQILRRGV-LSSRVAAQLVSCSSLLKSPDYSL- 80
Query: 201 DSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKAC 260
+F + E N ALI G + E ++R F ML+ V P+ TF VLK+
Sbjct: 81 ---SIFRNSEERNPFVLNALIRGLTENARFES-SVRHFILMLRLGVKPDRLTFPFVLKSN 136
Query: 261 ANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCE 320
+ L G LH+ T+K + + V SL++MYA++G+L+ A + F+ ++
Sbjct: 137 SKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESI 196
Query: 321 TIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSG 380
I +V++ G C K + + +S
Sbjct: 197 LIWNVLIN------------------GYCR----------------AKDMHMATTLFRSM 222
Query: 381 FETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSIISGFAKHGYATKALELFY 440
E N + LI Y G A Q+F M ++NV++WT++I+GF++ G A+ ++
Sbjct: 223 PERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYF 282
Query: 441 EMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRS 500
EMLE G+KPN+ T AVLSACS G + G + + +G+ +VD+ +
Sbjct: 283 EMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILD-NGIKLDRAIGTALVDMYAKC 341
Query: 501 GLLSEAIEFINSMPLDADAMVWRSLLGSCRVHG 533
G L A ++M D + W +++ VHG
Sbjct: 342 GELDCAATVFSNMN-HKDILSWTAMIQGWAVHG 373
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 141/346 (40%), Gaps = 68/346 (19%)
Query: 40 PNEYCFTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAH 99
P+E F + + AC ++ R V +L+ G S V+ +K + +
Sbjct: 27 PDESHFISLIHACKDTASL---RHVHAQILRRGVLSSRVAAQLVSCSSLLKSP---DYSL 80
Query: 100 RVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELE 159
+F +ERN N ++ + E S+ F ML G PDR T L + ++L
Sbjct: 81 SIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLG 140
Query: 160 LLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCA------------------------- 194
+G+ LH+ +++ + D V SLVDMYAK
Sbjct: 141 FRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWN 200
Query: 195 --VDG-----SLVDSRRVFNSMPEHNVVSWTALIAGYVRG-------------------- 227
++G + + +F SMPE N SW+ LI GYV
Sbjct: 201 VLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVS 260
Query: 228 ----------SGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTI 277
+G + A+ + +ML+ + PN +T ++VL AC+ G G ++H +
Sbjct: 261 WTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYIL 320
Query: 278 KLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIV 323
G+ + +L++MYA+ G L+CA F + K ++S ++
Sbjct: 321 DNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMI 366
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 115/247 (46%), Gaps = 23/247 (9%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRV 63
++++VSW ++++ F+ A+ T+ +MLE G PNEY A L ACS S G
Sbjct: 255 EKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIR 314
Query: 64 VFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQM 123
+ G +L G ++G L+DM+ K CG+++ A VF M +++++W M+ +A
Sbjct: 315 IHGYILDNG-IKLDRAIGTALVDMYAK-CGELDCAATVFSNMNHKDILSWTAMIQGWAVH 372
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVG 183
G +I F +M+ SG PD + LTAC + +G + LD +
Sbjct: 373 GRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFF-----DSMRLDYAIE 427
Query: 184 CSL------VDMYAKCAVDGSLVDSRRVFNSMP-EHNVVSWTALI------AGYVRGSGQ 230
+L VD+ + G L ++ + +MP ++ +W AL GY R
Sbjct: 428 PTLKHYVLVVDLLGRA---GKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESV 484
Query: 231 EQEAMRL 237
Q + L
Sbjct: 485 SQNLLEL 491
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/521 (21%), Positives = 211/521 (40%), Gaps = 45/521 (8%)
Query: 7 LVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFG 66
L+ + + S A L M G N Y + + C S+ G
Sbjct: 72 LIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMG 131
Query: 67 SVLKTGYFDSHVSVGCELIDMFVKG--CGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG 124
++K GY V+ + + ++G +E R+ E + ++T N ++ G
Sbjct: 132 KIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNG 191
Query: 125 YPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGC 184
D++ L RM+ +G+ P+ T L + ++ +L + + LD
Sbjct: 192 KVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYS 251
Query: 185 SLVDMYAKCAVDGSLVDSRRVFNSMP----EHNVVSWTALIAGYVRGSGQEQEAMRLFCD 240
++D K DGSL ++ +FN M + +++ +T LI G+ +G+ + +L D
Sbjct: 252 IIIDGLCK---DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY-AGRWDDGAKLLRD 307
Query: 241 MLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGR 300
M++ + P+ FS+++ E+LH + I+ G+S SLI+ + + +
Sbjct: 308 MIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQ 367
Query: 301 LECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGA 360
L+ A DL+ K G G T+ L++G
Sbjct: 368 LDKANHMLDLMVSK------------------------------GCGPNIRTFNILINGY 397
Query: 361 ACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDR----NV 416
I G ++ + G + N LI + + G E A ++F +M R ++
Sbjct: 398 CKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDI 457
Query: 417 ITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNS 476
+++ ++ G +G KALE+F ++ ++ ++ + Y ++ + +D+ W F S
Sbjct: 458 VSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCS 517
Query: 477 MRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDA 517
+ GV P V+ Y M+ L + G LSEA M D
Sbjct: 518 L-PLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDG 557
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/493 (21%), Positives = 218/493 (44%), Gaps = 23/493 (4%)
Query: 17 FANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVLKTGYFDS 76
+ SM + L++F M+ GF P+ L+ +S + V+ ++++ G +
Sbjct: 178 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPT 237
Query: 77 HVSVGCELIDMFVKGCGDIESAHRVFEKMQERNV----VTWNLMMTRFAQMGYPEDSIDL 132
++ L F GD+E +++ +M+ RN+ VT+N+++ F++ G E++
Sbjct: 238 VITFNTMLDSCF--KAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRF 295
Query: 133 FFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAK 192
M SG+ ++ + + L + ++ +G+ S ++Y
Sbjct: 296 HGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIY----PTTSTYNIYIC 351
Query: 193 CAVD-GSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGF 251
D G + D+R + +SM +VVS+ L+ GY++ G+ EA LF D+ G++ P+
Sbjct: 352 ALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIK-MGKFVEASLLFDDLRAGDIHPSIV 410
Query: 252 TFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLL 311
T+++++ + ++L + + +L+ + ++G L A + +D +
Sbjct: 411 TYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEM 470
Query: 312 FEKSL----VSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFT-YACLLSGAACIGT 365
K + + T +R +SD+ HE T A T Y + G +G
Sbjct: 471 LRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGN 530
Query: 366 IGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDR----NVITWTS 421
+ K + + + G + +I Y + G + A ++++M + +VIT+
Sbjct: 531 LVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFV 590
Query: 422 IISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCH 481
+I G AK G +A + EM + GV+PN +T+ A+L G IDE +++ M
Sbjct: 591 LIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEE-E 649
Query: 482 GVVPRVEHYACMV 494
G+ P Y ++
Sbjct: 650 GIPPNKYSYTMLI 662
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 100/464 (21%), Positives = 185/464 (39%), Gaps = 50/464 (10%)
Query: 133 FFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAK 192
F +M+ G+ P L + +++ ++ +I G+ + +++D
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLD---S 247
Query: 193 CAVDGSLVDSRRVFNSMPEHNV----VSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAP 248
C G L +++ M N+ V++ LI G+ + +G+ +EA R DM + A
Sbjct: 248 CFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSK-NGKMEEARRFHGDMRRSGFAV 306
Query: 249 NGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCF 308
++F+ +++ F + + + G+ N I GR++ AR+
Sbjct: 307 TPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARE-- 364
Query: 309 DLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGK 368
L+S DV+ S TL H I F A LL G
Sbjct: 365 -------LLSSMAAPDVV-----SYNTLMHGY-----IKMGKFVEASLLFDDLRAG---- 403
Query: 369 GEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDR----NVITWTSIIS 424
IH +V N LI + GN E A ++ +M + +VIT+T+++
Sbjct: 404 --DIHPSIVTY---------NTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVK 452
Query: 425 GFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVV 484
GF K+G + A E++ EML G+KP+ Y +G D+ ++ M
Sbjct: 453 GFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHA 512
Query: 485 PRVEHYACMVDVLGRSGLLSEAIEF---INSMPLDADAMVWRSLLGSCRVHGNTELGEHA 541
P + Y +D L + G L +AIEF I + L D + + +++ +G ++ +
Sbjct: 513 PDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNL 572
Query: 542 AKMILEREPHDPA-TYILLSNLYATEERWYDVAAIRKTMKQKKI 584
+L + + TY +L +A R MK++ +
Sbjct: 573 YDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGV 616
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 92/464 (19%), Positives = 177/464 (38%), Gaps = 51/464 (10%)
Query: 8 VSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGS 67
V++ +++ F+ N EA DM GF Y F + F V
Sbjct: 274 VTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDE 333
Query: 68 VLKTGYFDSHVSVG---CELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG 124
+L G + + + C L D G I+ A + M +VV++N +M + +MG
Sbjct: 334 MLNAGIYPTTSTYNIYICALCDF-----GRIDDARELLSSMAAPDVVSYNTLMHGYIKMG 388
Query: 125 YPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGC 184
++ LF + P T + + E L ++L + + D+
Sbjct: 389 KFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYT 448
Query: 185 SLVDMYAKCAVDGSLVDSRRVFNSMPEHNV----VSWTALIAGYVRGSGQEQEAMRLFCD 240
+LV + K +G+L + V++ M + ++T G +R G +A RL +
Sbjct: 449 TLVKGFVK---NGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELR-LGDSDKAFRLHEE 504
Query: 241 MLQGNV-APNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSG 299
M+ + AP+ ++ + + + + + ++GL + ++I Y +G
Sbjct: 505 MVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENG 564
Query: 300 RLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSG 359
+ + AR +D + K L TY L+ G
Sbjct: 565 QFKMARNLYDEMLRKRLY------------------------------PSVITYFVLIYG 594
Query: 360 AACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDR----N 415
A G + + Q + K G N+ +NAL+ K GN + A + M + N
Sbjct: 595 HAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPN 654
Query: 416 VITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLS 459
++T +IS + ++L+ EML+ ++P+ T+ A+
Sbjct: 655 KYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFK 698
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 119/522 (22%), Positives = 215/522 (41%), Gaps = 53/522 (10%)
Query: 6 DLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVF 65
DL S+ +++CF S AL M++ G+ P+ +V
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPD---------------------IVT 152
Query: 66 GSVLKTGY-FDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMG 124
S L GY +S L+D ++F + N VT+N ++
Sbjct: 153 LSSLLNGYCHGKRISEAVALVD-------------QMFVMEYQPNTVTFNTLIHGLFLHN 199
Query: 125 YPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGC 184
+++ L RM+ G PD FT + + + + + L + + + D+ +
Sbjct: 200 KASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYT 259
Query: 185 SLVDMYAKCAVDGSLVDSRRVFNSMPEH----NVVSWTALIAGYVRGSGQEQEAMRLFCD 240
+++D A C ++ D+ +F M NVV++ +LI G+ +A RL D
Sbjct: 260 TIID--ALCNYK-NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC-NYGRWSDASRLLSD 315
Query: 241 MLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGR 300
M++ + PN TFS+++ A E+L+ + IK + +SLIN + R
Sbjct: 316 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 375
Query: 301 LECARKCFDLLFEK----SLVSCETIVDVIVRDLNSDETLNHETEHTT-GIGACSFTYAC 355
L+ A+ F+L+ K ++V+ T++ + +E + E + G+ + TY
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435
Query: 356 LLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMG--- 412
L+ G G ++I +V G ++ + L+ K G E AL VF +
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK 495
Query: 413 -DRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGW 471
+ ++ T+ +I G K G +LF + GVKPN + Y ++S GL +E
Sbjct: 496 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEAD 555
Query: 472 KHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSM 513
F M+ G +P Y ++ R G + + E I M
Sbjct: 556 ALFREMKE-DGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 596
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 115/500 (23%), Positives = 204/500 (40%), Gaps = 64/500 (12%)
Query: 1 MGSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSV 60
+G + D+V+ S+++ + + EA+ M + PN F + L+
Sbjct: 144 LGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGL--FLHNKA 201
Query: 61 GRVVFGSVLKTGYFDSHVSVGCELIDMFVKGC--------GDIESAHRVFEKMQ----ER 108
V D V+ GC+ D+F G GDI+ A + +KM+ E
Sbjct: 202 SEAV-------ALIDRMVARGCQ-PDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 253
Query: 109 NVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLH 168
+VV + ++ D+++LF M G P+ T S + S +L
Sbjct: 254 DVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLL 313
Query: 169 SWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH----NVVSWTALIAGY 224
S +I + ++ +L+D + K +G LV++ ++++ M + ++ ++++LI G+
Sbjct: 314 SDMIERKINPNVVTFSALIDAFVK---EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 370
Query: 225 VRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAV 284
+ EA +F M+ + PN T+++++K G +L + + GL
Sbjct: 371 CM-HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGN 429
Query: 285 NCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTT 344
N+LI ++G + A+K F K +VS D+I
Sbjct: 430 TVTYNTLIQGLFQAGDCDMAQKIF-----KKMVSDGVPPDII------------------ 466
Query: 345 GIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAA 404
TY+ LL G G + K + + KS E ++ N +I K G E
Sbjct: 467 -------TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDG 519
Query: 405 LQVFNDMGDR----NVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSA 460
+F + + NVI +T++ISGF + G +A LF EM E G PN TY ++ A
Sbjct: 520 WDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 579
Query: 461 CSHVGLIDEGWKHFNSMRHC 480
G + MR C
Sbjct: 580 RLRDGDKAASAELIKEMRSC 599
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 99/466 (21%), Positives = 194/466 (41%), Gaps = 55/466 (11%)
Query: 103 EKMQERNV----VTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALT----- 153
E+MQ + ++N+++ F + ++ + +M+ GY PD TL+S L
Sbjct: 104 ERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHG 163
Query: 154 -----ACAELELLSV---------------GKQLHSWVIRSGLALDLCV--GCSLVDMYA 191
A A ++ + V G LH+ + +D V GC D++
Sbjct: 164 KRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQ-PDLFT 222
Query: 192 ----------KCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDM 241
+ +D +L +++ E +VV +T +I +A+ LF +M
Sbjct: 223 YGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALC-NYKNVNDALNLFTEM 281
Query: 242 LQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRL 301
+ PN T++S+++ N + +L S I+ ++ ++LI+ + + G+L
Sbjct: 282 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 341
Query: 302 ECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACS------FTYAC 355
A K +D + ++S+ ++ + L+ E +H + TY
Sbjct: 342 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD-EAKHMFELMISKDCFPNVVTYNT 400
Query: 356 LLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDR- 414
L+ G + +G ++ + + G N N LI + G+ + A ++F M
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Query: 415 ---NVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGW 471
++IT++ ++ G K+G KAL +F + ++ ++P+ TY ++ G +++GW
Sbjct: 461 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGW 520
Query: 472 KHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDA 517
F S+ GV P V Y M+ R GL EA M D
Sbjct: 521 DLFCSL-SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 565
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 142/343 (41%), Gaps = 48/343 (13%)
Query: 2 GSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRAC--------S 53
G + ++V++ S++ C N +A DM+E PN F+A + A +
Sbjct: 285 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 344
Query: 54 NSLY-----FSVGRVVFG-SVLKTGY------------FDSHVSVGC--------ELIDM 87
LY S+ +F S L G+ F+ +S C LI
Sbjct: 345 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 404
Query: 88 FVKGCGDIESAHRVFEKMQER----NVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTP 143
F K +E +F +M +R N VT+N ++ Q G + + +F +M+ G P
Sbjct: 405 FCKA-KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP 463
Query: 144 DRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSR 203
D T + L + L + ++ +S + D+ +++ K G + D
Sbjct: 464 DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKA---GKVEDGW 520
Query: 204 RVFNSMP----EHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKA 259
+F S+ + NV+ +T +I+G+ R G ++EA LF +M + PN T++++++A
Sbjct: 521 DLFCSLSLKGVKPNVIIYTTMISGFCR-KGLKEEADALFREMKEDGTLPNSGTYNTLIRA 579
Query: 260 CANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLE 302
D +L + G + +INM GRLE
Sbjct: 580 RLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-HDGRLE 621
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 121/583 (20%), Positives = 235/583 (40%), Gaps = 101/583 (17%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGR 62
SK + M+ + H A TF M G P +T+ + A ++VGR
Sbjct: 305 SKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHA------YAVGR 358
Query: 63 -------------------------VVFGSVLKTG-------YFDS--------HVSVGC 82
V+ G K G +FD + S+
Sbjct: 359 DMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYG 418
Query: 83 ELIDMFVKGCGDIESAHRVFEKMQERNV----VTWNLMMTRFAQMGYPEDSIDLFFRMLL 138
++I + C ++E A + +M+E + ++ MM + + + + +F R+
Sbjct: 419 KIIYAHCQTC-NMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKE 477
Query: 139 SGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCA-VDG 197
G+TP T GC L+++Y K +
Sbjct: 478 CGFTPTVVTY----------------------------------GC-LINLYTKVGKISK 502
Query: 198 SLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVL 257
+L SR + +HN+ +++ +I G+V+ A +F DM++ + P+ +++++
Sbjct: 503 ALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWAN-AFAVFEDMVKEGMKPDVILYNNII 561
Query: 258 KACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFE---- 313
A + + Q + KL +I+ YA+SG + + + FD++
Sbjct: 562 SAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCV 621
Query: 314 KSLVSCETIVDVIVRDLNSDETLNHETEHT-TGIGACSFTYACLLSGAACIGTIGKGEQI 372
++ + +++ +V ++ + E T G+ A TY ++ G A +G GK +
Sbjct: 622 PTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEY 681
Query: 373 HALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNV----ITWTSIISGFAK 428
+ G + ++ AL+ K G ++AL V +M RN+ + +I G+A+
Sbjct: 682 FTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWAR 741
Query: 429 HGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVE 488
G +A +L +M + GVKP+ TY + +SACS G ++ + M GV P ++
Sbjct: 742 RGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEM-EALGVKPNIK 800
Query: 489 HYACMVDVLGRSGLLSEAI---EFINSMPLDADAMVWRSLLGS 528
Y ++ R+ L +A+ E + +M + D V+ LL S
Sbjct: 801 TYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTS 843
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 106/477 (22%), Positives = 194/477 (40%), Gaps = 59/477 (12%)
Query: 61 GRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQER----NVVTWNLM 116
G VVF + + G+ + V+ GC LI+++ K G I A V M+E N+ T+++M
Sbjct: 468 GLVVFKRLKECGFTPTVVTYGC-LINLYTK-VGKISKALEVSRVMKEEGVKHNLKTYSMM 525
Query: 117 MTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGL 176
+ F ++ ++ +F M+ G PD + ++A + + Q + +
Sbjct: 526 INGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRH 585
Query: 177 ALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPE----HNVVSWTALIAGYVRGSGQEQ 232
++ YAK G + S VF+ M V ++ LI G V Q +
Sbjct: 586 RPTTRTFMPIIHGYAKS---GDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKR-QME 641
Query: 233 EAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLI 292
+A+ + +M V+ N T++ +++ A++ D G + ++ GL +L+
Sbjct: 642 KAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALL 701
Query: 293 NMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFT 352
+SGR++ A V+ E I R+ SF
Sbjct: 702 KACCKSGRMQSAL----------AVTKEMSARNIPRN--------------------SFV 731
Query: 353 YACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMG 412
Y L+ G A G + + + + K G + ++ + IS SK G+ A Q +M
Sbjct: 732 YNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEME 791
Query: 413 ----DRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLID 468
N+ T+T++I G+A+ KAL + EM G+KP+ Y +L++ I
Sbjct: 792 ALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIA 851
Query: 469 EGWKHFNSMRHCHGVVP---------RVEHYACMVDVLGRSGLLSEAIEFINSMPLD 516
E + + M C +V V C+ + G L+E ++ + P D
Sbjct: 852 EAYIYSGVMTICKEMVEAGLIVDMGTAVHWSKCLCKIEASGGELTETLQ--KTFPPD 906
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 135/342 (39%), Gaps = 35/342 (10%)
Query: 202 SRRVFNSMPEHNVVSWTALIAGYVRGS-----------------GQEQEAMRLFCDMLQG 244
SR+ + + N +W A+I+ + + S G A F M
Sbjct: 279 SRKSLQRILDTNGDNWQAVISAFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRAR 338
Query: 245 NVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECA 304
+ P ++S++ A A D + + G+ + ++ ++++G E A
Sbjct: 339 GITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAA 398
Query: 305 RKCFDLLFEKSLVSCETIVDVIVR------DLNSDETLNHETEHTTGIGACSFTYACLLS 358
FD +I I+ ++ E L E E GI A Y ++
Sbjct: 399 DYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEE-GIDAPIAIYHTMMD 457
Query: 359 GAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDR---- 414
G + KG + + + GF + LI++Y+K G AL+V M +
Sbjct: 458 GYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKH 517
Query: 415 NVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGW--- 471
N+ T++ +I+GF K A +F +M++ G+KP+ + Y ++SA +G +D
Sbjct: 518 NLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTV 577
Query: 472 KHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSM 513
K +RH P + ++ +SG + ++E + M
Sbjct: 578 KEMQKLRH----RPTTRTFMPIIHGYAKSGDMRRSLEVFDMM 615
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 109 bits (272), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 172/378 (45%), Gaps = 25/378 (6%)
Query: 161 LSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH----NVVS 216
+++ K++ G + +L+ Y + + + VFNSM E+ N+V+
Sbjct: 249 VTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAIS---VFNSMKEYGLRPNLVT 305
Query: 217 WTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQT 276
+ A+I +G + ++ + F +M + V P+ TF+S+L C+ + L +
Sbjct: 306 YNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEM 365
Query: 277 IKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFE-------KSLVSCETIVDVIVRD 329
+ N+L++ + G+++ A F++L + ++VS T++D +
Sbjct: 366 TNRRIEQDVFSYNTLLDAICKGGQMDLA---FEILAQMPVKRIMPNVVSYSTVIDGFAKA 422
Query: 330 LNSDETLNHETE-HTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSIN 388
DE LN E GI +Y LLS +G + I + G + ++
Sbjct: 423 GRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTY 482
Query: 389 NALISMYSKCGNKEAALQVFNDMGDR----NVITWTSIISGFAKHGYATKALELFYEMLE 444
NAL+ Y K G + +VF +M N++T++++I G++K G +A+E+F E
Sbjct: 483 NALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKS 542
Query: 445 TGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLS 504
G++ + V Y A++ A GL+ + M G+ P V Y ++D GRS +
Sbjct: 543 AGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTK-EGISPNVVTYNSIIDAFGRSATMD 601
Query: 505 EAIEFIN--SMPLDADAM 520
+ ++ N S+P + A+
Sbjct: 602 RSADYSNGGSLPFSSSAL 619
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 154/344 (44%), Gaps = 48/344 (13%)
Query: 197 GSLVDSRRVFNSMPE----HNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFT 252
G + ++R+F + + V +++ALI+ Y R SG +EA+ +F M + + PN T
Sbjct: 247 GKVTIAKRIFETAFAGGYGNTVYAFSALISAYGR-SGLHEEAISVFNSMKEYGLRPNLVT 305
Query: 253 FSSVLKACANLP-DFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLL 311
+++V+ AC +F + + + G+ NSL+ + +R G E AR FD
Sbjct: 306 YNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFD-- 363
Query: 312 FEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQ 371
E N E F+Y LL G + +
Sbjct: 364 ----------------------EMTNRRIEQDV------FSYNTLLDAICKGGQMDLAFE 395
Query: 372 IHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMG------DRNVITWTSIISG 425
I A + N+ + +I ++K G + AL +F +M DR +++ +++S
Sbjct: 396 ILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDR--VSYNTLLSI 453
Query: 426 FAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVP 485
+ K G + +AL++ EM G+K + VTY A+L G DE K F M+ H V+P
Sbjct: 454 YTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH-VLP 512
Query: 486 RVEHYACMVDVLGRSGLLSEAIEF---INSMPLDADAMVWRSLL 526
+ Y+ ++D + GL EA+E S L AD +++ +L+
Sbjct: 513 NLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALI 556
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/469 (20%), Positives = 202/469 (43%), Gaps = 65/469 (13%)
Query: 9 SWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSV 68
++ +++S + + + EA+ F M E+G PN + A + AC G + F V
Sbjct: 270 AFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGK------GGMEFKQV 323
Query: 69 LKTGYFDSHVSVGCE--------LIDMFVKGCGDIESAHRVFEKMQ----ERNVVTWNLM 116
K +FD G + L+ + +G G E+A +F++M E++V ++N +
Sbjct: 324 AK--FFDEMQRNGVQPDRITFNSLLAVCSRG-GLWEAARNLFDEMTNRRIEQDVFSYNTL 380
Query: 117 MTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGL 176
+ + G + + ++ +M + P+ + ++ + A+ L + G+
Sbjct: 381 LDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGI 440
Query: 177 ALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMP-EHNVVSWTALIAGYVRGSGQEQEAM 235
ALD +L+ +Y K +D R S+ + +VV++ AL+ GY + G+ E
Sbjct: 441 ALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGK-QGKYDEVK 499
Query: 236 RLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMY 295
++F +M + +V PN T+S+++ + + ++ + GL A + ++LI+
Sbjct: 500 KVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDAL 559
Query: 296 ARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYAC 355
++G + A D + ++ + + I+ T++ +++ G G+ F+
Sbjct: 560 CKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNG-GSLPFS--- 615
Query: 356 LLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDM-GDR 414
++AL ++ GN+ +Q+F + +
Sbjct: 616 --------------------------------SSALSALTETEGNR--VIQLFGQLTTES 641
Query: 415 NVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSH 463
N T G + + LE+F +M + +KPN VT+ A+L+ACS
Sbjct: 642 NNRTTKDCEEGMQE---LSCILEVFRKMHQLEIKPNVVTFSAILNACSR 687
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 82/167 (49%), Gaps = 12/167 (7%)
Query: 360 AACIGTIGK------GEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGD 413
+A I T+G+ ++I G+ + +ALIS Y + G E A+ VFN M +
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 414 ----RNVITWTSIISGFAKHGYATKALELFY-EMLETGVKPNDVTYIAVLSACSHVGLID 468
N++T+ ++I K G K + F+ EM GV+P+ +T+ ++L+ CS GL +
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 469 EGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPL 515
F+ M + + V Y ++D + + G + A E + MP+
Sbjct: 357 AARNLFDEMTNRR-IEQDVFSYNTLLDAICKGGQMDLAFEILAQMPV 402
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 93/192 (48%), Gaps = 10/192 (5%)
Query: 387 INNALISMYSKCGNKEAALQVFNDM---GDRNVI-TWTSIISGFAKHGYATKALELFYEM 442
+ +A+IS + G A ++F G N + ++++IS + + G +A+ +F M
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 443 LETGVKPNDVTYIAVLSACSHVGL-IDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSG 501
E G++PN VTY AV+ AC G+ + K F+ M+ +GV P + ++ V R G
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQR-NGVQPDRITFNSLLAVCSRGG 353
Query: 502 LLSEAIEFINSMP---LDADAMVWRSLLGSCRVHGNTELG-EHAAKMILEREPHDPATYI 557
L A + M ++ D + +LL + G +L E A+M ++R + +Y
Sbjct: 354 LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYS 413
Query: 558 LLSNLYATEERW 569
+ + +A R+
Sbjct: 414 TVIDGFAKAGRF 425
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/520 (21%), Positives = 220/520 (42%), Gaps = 66/520 (12%)
Query: 63 VVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQ 122
V+F ++L + VS EL+D R+ E + ++T N ++
Sbjct: 159 VIFNTLLNGLCLECRVSEALELVD-------------RMVEMGHKPTLITLNTLVNGLCL 205
Query: 123 MGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCV 182
G D++ L RM+ +G+ P+ T L + ++ +L + + LD
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 183 GCSLVDMYAKCAVDGSLVDSRRVFNSMP----EHNVVSWTALIAGYVRGSGQEQEAMRLF 238
++D K DGSL ++ +FN M + +++++ LI G+ +G+ + +L
Sbjct: 266 YSIIIDGLCK---DGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC-NAGRWDDGAKLL 321
Query: 239 CDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARS 298
DM++ ++PN TFS ++ + +QL + ++ G++ NSLI+ + +
Sbjct: 322 RDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKE 381
Query: 299 GRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLS 358
RLE A + DL+ K C+ + T+ L++
Sbjct: 382 NRLEEAIQMVDLMISK---GCDPDI---------------------------MTFNILIN 411
Query: 359 GAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDR---- 414
G I G ++ + G N N L+ + + G E A ++F +M R
Sbjct: 412 GYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRP 471
Query: 415 NVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHF 474
+++++ ++ G +G KALE+F ++ ++ ++ + Y+ ++ + +D+ W F
Sbjct: 472 DIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLF 531
Query: 475 NSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDA---DAMVWRSLLGSCRV 531
S+ GV Y M+ L R LS+A M + D + + L+ R
Sbjct: 532 CSL-PLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILI---RA 587
Query: 532 HGNTELGEHAAKMILERE----PHDPATYILLSNLYATEE 567
H + AA++I E + P D +T ++ N+ ++ E
Sbjct: 588 HLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGE 627
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 100/477 (20%), Positives = 195/477 (40%), Gaps = 85/477 (17%)
Query: 1 MGSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSV 60
MG K L++ ++++ N +A+V M+E GF PNE
Sbjct: 187 MGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNE------------------ 228
Query: 61 GRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNV----VTWNLM 116
V +G VL +V C+ G A + KM+ERN+ V ++++
Sbjct: 229 --VTYGPVL---------NVMCK--------SGQTALAMELLRKMEERNIKLDAVKYSII 269
Query: 117 MTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGL 176
+ + G +++ +LF M + G+ D T + + G +L +I+ +
Sbjct: 270 IDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKI 329
Query: 177 ALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH----NVVSWTALIAGYVRGSGQEQ 232
+ ++ L+D + K +G L ++ ++ M + N +++ +LI G+ + + +
Sbjct: 330 SPNVVTFSVLIDSFVK---EGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCK-ENRLE 385
Query: 233 EAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLI 292
EA+++ M+ P+ TF+ ++ G +L + G+ A N+L+
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445
Query: 293 NMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFT 352
+ +SG+LE A+K F + +VS D++ +
Sbjct: 446 QGFCQSGKLEVAKKLF-----QEMVSRRVRPDIV-------------------------S 475
Query: 353 YACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMG 412
Y LL G G + K +I + KS E ++ I +I + A +F +
Sbjct: 476 YKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLP 535
Query: 413 DRNVI----TWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVG 465
+ V + +IS + +KA LF +M E G P+++TY ++ A H+G
Sbjct: 536 LKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRA--HLG 590
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 166/401 (41%), Gaps = 20/401 (4%)
Query: 127 EDSIDLFFRMLLSGYTP---DRFTLTSALTACAELEL-LSVGKQLHSWVIRSGLALDLCV 182
+D++DLF M+ S P D L SA+ + EL L++ KQ+ S G+A +
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMES----KGIAHSIYT 125
Query: 183 GCSLVDMYAKC-AVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDM 241
+++ + +C + + ++ E + V + L+ G + EA+ L M
Sbjct: 126 LSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCL-ECRVSEALELVDRM 184
Query: 242 LQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRL 301
++ P T ++++ L + ++ G ++N+ +SG+
Sbjct: 185 VEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQT 244
Query: 302 ECARKCFDLLFEKSL----VSCETIVDVIVRDLNSDETLNHETE-HTTGIGACSFTYACL 356
A + + E+++ V I+D + +D + D N E G A TY L
Sbjct: 245 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTL 304
Query: 357 LSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDR-- 414
+ G G G ++ ++K N+ + LI + K G A Q+ +M R
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI 364
Query: 415 --NVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWK 472
N IT+ S+I GF K +A+++ M+ G P+ +T+ +++ ID+G +
Sbjct: 365 APNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLE 424
Query: 473 HFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSM 513
F M GV+ Y +V +SG L A + M
Sbjct: 425 LFREM-SLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEM 464
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 98/461 (21%), Positives = 193/461 (41%), Gaps = 28/461 (6%)
Query: 140 GYTPDRFTLTSALTA-CAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGS 198
GY PD + L C E + S +L ++ G L +LV+ ++G
Sbjct: 153 GYEPDTVIFNTLLNGLCLECRV-SEALELVDRMVEMGHKPTLITLNTLVN---GLCLNGK 208
Query: 199 LVDSRRVFNSMPE----HNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFS 254
+ D+ + + M E N V++ ++ + SGQ AM L M + N+ + +S
Sbjct: 209 VSDAVVLIDRMVETGFQPNEVTYGPVLNVMCK-SGQTALAMELLRKMEERNIKLDAVKYS 267
Query: 255 SVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCF-DLLFE 313
++ L ++ G A N+LI + +GR + K D++
Sbjct: 268 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 314 K---SLVSCETIVDVIVRD---LNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIG 367
K ++V+ ++D V++ +D+ L + GI + TY L+ G +
Sbjct: 328 KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR--GIAPNTITYNSLIDGFCKENRLE 385
Query: 368 KGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDR----NVITWTSII 423
+ Q+ L++ G + ++ N LI+ Y K + L++F +M R N +T+ +++
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445
Query: 424 SGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGV 483
GF + G A +LF EM+ V+P+ V+Y +L G +++ + F +
Sbjct: 446 QGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKME 505
Query: 484 VPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDA---DAMVWRSLLGS-CRVHGNTELGE 539
+ + Y ++ + + + +A + S+PL DA + ++ CR ++
Sbjct: 506 LD-IGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADI 564
Query: 540 HAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMK 580
KM E D TY +L + ++ A + + MK
Sbjct: 565 LFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMK 605
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 174/381 (45%), Gaps = 11/381 (2%)
Query: 109 NVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLH 168
++ T+N+++ F ++ + +ML GY PDR T+ S + +S L
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178
Query: 169 SWVIRSGLALDLCVGCSLVDMYAKCA-VDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRG 227
++ G D+ +++D K V+ + + + NVV++TAL+ G
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLC-N 237
Query: 228 SGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCV 287
S + +A RL DM++ + PN T+S++L A ++L + +++ +
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297
Query: 288 ANSLINMYARSGRLECARKCFDLLFEK----SLVSCETIVDVIVRDLNSDETLNHETEHT 343
+SLIN R++ A + FDL+ K +VS T+++ + ++ + E +
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357
Query: 344 T-GIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKE 402
G+ + + TY L+ G G + K ++ + + G ++ N L+ G E
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELE 417
Query: 403 AALQVFNDMGDR----NVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVL 458
AL +F DM R +++T+T++I G K G +A LF + G+KP+ VTY ++
Sbjct: 418 KALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 477
Query: 459 SACSHVGLIDEGWKHFNSMRH 479
S GL+ E + M+
Sbjct: 478 SGLCTKGLLHEVEALYTKMKQ 498
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 97/478 (20%), Positives = 201/478 (42%), Gaps = 61/478 (12%)
Query: 128 DSIDLFFRMLLSGYTPDRFTLTSALTACAELE----LLSVGKQLHSWVIRSGL-ALDLCV 182
D+IDLF M+ S P L+A +L+ ++S+GK++ IR+ L ++ +
Sbjct: 68 DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127
Query: 183 GCSLVDMYAKCAVDGSLVDS--RRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCD 240
C C SL S ++ E + V+ +L+ G+ R + +A+ L
Sbjct: 128 NCFC------CCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCR-RNRVSDAVSLVDK 180
Query: 241 MLQGNVAPNGFTFSSVLKACANLPD----FGFGEQLHSQTIKLGLSAVNCVANSLINMYA 296
M++ P+ +++++ + F F +++ + I+ + + N L N
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240
Query: 297 RSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACL 356
S + AR D++ +K I TY+ L
Sbjct: 241 WS---DAARLLSDMIKKK-------------------------------ITPNVITYSAL 266
Query: 357 LSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDR-- 414
L G + + +++ +V+ + ++ ++LI+ + A Q+F+ M +
Sbjct: 267 LDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGC 326
Query: 415 --NVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWK 472
+V+++ ++I+GF K ++LF EM + G+ N VTY ++ G +D+ +
Sbjct: 327 LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQE 386
Query: 473 HFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMP---LDADAMVWRSLL-GS 528
F+ M G+ P + Y ++ L +G L +A+ M +D D + + +++ G
Sbjct: 387 FFSQMDF-FGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGM 445
Query: 529 CRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIK 586
C+ E + L+ D TY + + T+ ++V A+ MKQ+ ++K
Sbjct: 446 CKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMK 503
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 115/524 (21%), Positives = 229/524 (43%), Gaps = 28/524 (5%)
Query: 2 GSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVG 61
G ++V++C++++ F A F M + G P+ ++ + + +G
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMG 340
Query: 62 RVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQ----ERNVVTWNLMM 117
+F L G V V ID++VK GD+ +A V+++M NVVT+ +++
Sbjct: 341 HKLFSQALHKG-VKLDVVVFSSTIDVYVKS-GDLATASVVYKRMLCQGISPNVVTYTILI 398
Query: 118 TRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLA 177
Q G ++ ++ ++L G P T +S + + L G L+ +I+ G
Sbjct: 399 KGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYP 458
Query: 178 LDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH----NVVSWTALIAGYVRGSGQEQE 233
D+ + LVD +K G ++ + R M NVV + +LI G+ R + E
Sbjct: 459 PDVVIYGVLVDGLSK---QGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR-LNRFDE 514
Query: 234 AMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLIN 293
A+++F M + P+ TF++V++ L + K+GL +LI+
Sbjct: 515 ALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLID 574
Query: 294 MYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDL-------NSDETLNHETEHTTGI 346
+ + + + FDL+ + + + +V++ L ++ + N+ E +
Sbjct: 575 AFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGK--M 632
Query: 347 GACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQ 406
TY ++ G + + + E+I L+ + F N LI + K + + A++
Sbjct: 633 EPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIR 692
Query: 407 VFNDMGDR----NVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACS 462
+F+ M ++ N +T+ ++ F+K + +LF EM E G+ P+ V+Y ++
Sbjct: 693 MFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLC 752
Query: 463 HVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEA 506
G +DE F+ ++P V YA ++ + G L EA
Sbjct: 753 KRGRVDEATNIFHQAIDAK-LLPDVVAYAILIRGYCKVGRLVEA 795
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 138/569 (24%), Positives = 235/569 (41%), Gaps = 122/569 (21%)
Query: 58 FSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMM 117
F VG V VLK G + V L+ + V CG NVVT+ ++
Sbjct: 248 FRVGIVSCNKVLK-GLSVDQIEVASRLLSL-VLDCG------------PAPNVVTFCTLI 293
Query: 118 TRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLA 177
F + G + + DLF M G PD ++ + + +L +G +L S + G+
Sbjct: 294 NGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVK 353
Query: 178 LDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSM----PEHNVVSWTALIAGYVRGSGQEQE 233
LD+ V S +D+Y K G L + V+ M NVV++T LI G + G+ E
Sbjct: 354 LDVVVFSSTIDVYVK---SGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ-DGRIYE 409
Query: 234 AMRLFCDMLQGNVAPNGFTFSSVLKA---CANL----------------PDF-------- 266
A ++ +L+ + P+ T+SS++ C NL PD
Sbjct: 410 AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469
Query: 267 GFGEQ---LHS---------QTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLL--- 311
G +Q LH+ Q+I+L + V NSLI+ + R R + A K F L+
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNV----VVFNSLIDGWCRLNRFDEALKVFRLMGIY 525
Query: 312 -FEKSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGAAC---IGTI 366
+ + + T++ V + + +E L G+ + Y C L A C TI
Sbjct: 526 GIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAY-CTLIDAFCKHMKPTI 584
Query: 367 GKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDM----GDRNVITWTSI 422
G Q+ L+ ++ ++++ N +I + KC E A + FN++ + +++T+ ++
Sbjct: 585 GL--QLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTM 642
Query: 423 ISGF-----------------------------------AKHGYATKALELFYEMLETGV 447
I G+ K+ A+ +F M E G
Sbjct: 643 ICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGS 702
Query: 448 KPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAI 507
KPN VTY ++ S I+ +K F M+ G+ P + Y+ ++D L + G + EA
Sbjct: 703 KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQE-KGISPSIVSYSIIIDGLCKRGRVDEAT 761
Query: 508 EFINSMPLDA----DAMVWRSLL-GSCRV 531
+ +DA D + + L+ G C+V
Sbjct: 762 NIFHQ-AIDAKLLPDVVAYAILIRGYCKV 789
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 135/300 (45%), Gaps = 19/300 (6%)
Query: 246 VAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECAR 305
V+ +GF ++ F + + ++G+ + N V L ++E A
Sbjct: 217 VSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-----SVDQIEVAS 271
Query: 306 KCFDLLFE----KSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGA 360
+ L+ + ++V+ T+++ + D + + GI Y+ L+ G
Sbjct: 272 RLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGY 331
Query: 361 ACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMG----DRNV 416
G +G G ++ + + G + ++ + ++ I +Y K G+ A V+ M NV
Sbjct: 332 FKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNV 391
Query: 417 ITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNS 476
+T+T +I G + G +A ++ ++L+ G++P+ VTY +++ G + G+ +
Sbjct: 392 VTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYED 451
Query: 477 MRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSM---PLDADAMVWRSLL-GSCRVH 532
M G P V Y +VD L + GL+ A+ F M + + +V+ SL+ G CR++
Sbjct: 452 MIK-MGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLN 510
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 10/169 (5%)
Query: 342 HTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNK 401
+G+ A F L C G + K H LV++ GF + N ++ S
Sbjct: 213 EPSGVSAHGFVLDALF----CKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLS-VDQI 267
Query: 402 EAALQVFNDMGD----RNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAV 457
E A ++ + + D NV+T+ ++I+GF K G +A +LF M + G++P+ + Y +
Sbjct: 268 EVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTL 327
Query: 458 LSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEA 506
+ G++ G K F+ H GV V ++ +DV +SG L+ A
Sbjct: 328 IDGYFKAGMLGMGHKLFSQALH-KGVKLDVVVFSSTIDVYVKSGDLATA 375
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 118/497 (23%), Positives = 209/497 (42%), Gaps = 63/497 (12%)
Query: 33 MLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHV-------------- 78
M+ G YP+ F + + A S S + ++K G+ +V
Sbjct: 363 MMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKD 422
Query: 79 SVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTR-FAQMGYPEDSIDLFFRML 137
S+ C+L+D+ K ++ +A V K+ NV ++ TR G E + + M+
Sbjct: 423 SLNCDLLDLAEKAYSEMLAAGVVLNKI---NVSSF----TRCLCSAGKYEKAFSVIREMI 475
Query: 138 LSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDG 197
G+ PD T + L + + L + R GL D+ +VD + K G
Sbjct: 476 GQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKA---G 532
Query: 198 SLVDSRRVFNSMPE----HNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTF 253
+ +R+ FN M E NVV++TALI Y++ + A LF ML PN T+
Sbjct: 533 LIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAK-KVSYANELFETMLSEGCLPNIVTY 591
Query: 254 SSVL----------KAC---------ANLPDFG-FGEQLHSQTIKLGLSAVNCVANSLIN 293
S+++ KAC ++PD + +Q + + + +L++
Sbjct: 592 SALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNV----VTYGALLD 647
Query: 294 MYARSGRLECARKCFDLLF----EKSLVSCETIVDVIVRDLNSDETLNHETEHTT-GIGA 348
+ +S R+E ARK D + E + + + ++D + + DE +TE + G A
Sbjct: 648 GFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPA 707
Query: 349 CSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVF 408
+TY+ L+ + ++ + ++++ N+ I +I K G + A ++
Sbjct: 708 TLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLM 767
Query: 409 NDMGDR----NVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHV 464
M ++ NV+T+T++I GF G LEL M GV PN VTY ++ C
Sbjct: 768 QMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKN 827
Query: 465 GLIDEGWKHFNSMRHCH 481
G +D M+ H
Sbjct: 828 GALDVAHNLLEEMKQTH 844
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 165/399 (41%), Gaps = 41/399 (10%)
Query: 141 YTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALD-LCVGCSLVDMYAKCAVDG-- 197
+ P R T + A + + L +H + + L +D + C Y+ C V
Sbjct: 231 FRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCF---AYSLCKVGKWR 287
Query: 198 ---SLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFS 254
+LV++ N +P + V +T LI+G S E EAM M + PN T+S
Sbjct: 288 EALTLVETE---NFVP--DTVFYTKLISGLCEASLFE-EAMDFLNRMRATSCLPNVVTYS 341
Query: 255 SVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEK 314
++L C N G +++ + + G + NSL++ Y SG A K K
Sbjct: 342 TLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL-----K 396
Query: 315 SLVSCETIVDVIVRD------------LNSDETLNHETEHTTGIGA-CSFTYACLLSGAA 361
+V C + +V + LN D E ++ + A + S
Sbjct: 397 KMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTR 456
Query: 362 CIGTIGKGEQIHALV---VKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGD----R 414
C+ + GK E+ +++ + GF + S + +++ E A +F +M
Sbjct: 457 CLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVA 516
Query: 415 NVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHF 474
+V T+T ++ F K G +A + F EM E G PN VTY A++ A + + F
Sbjct: 517 DVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF 576
Query: 475 NSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSM 513
+M G +P + Y+ ++D ++G + +A + M
Sbjct: 577 ETMLS-EGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 112/559 (20%), Positives = 215/559 (38%), Gaps = 73/559 (13%)
Query: 8 VSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGS 67
++ S C + +A +M+ GF P+ ++ L N+ + ++F
Sbjct: 449 INVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEE 508
Query: 68 VLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQE----RNVVTWNLMMTRFAQM 123
+K G + V ++D F K G IE A + F +M+E NVVT+ ++ + +
Sbjct: 509 -MKRGGLVADVYTYTIMVDSFCKA-GLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKA 566
Query: 124 GYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVG 183
+ +LF ML G P+ T ++ + + + Q+ + S D
Sbjct: 567 KKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPD---- 622
Query: 184 CSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQ 243
VDMY K D S NVV++ AL+ G+ + S + +EA +L M
Sbjct: 623 ---VDMYFKQYDDNS-----------ERPNVVTYGALLDGFCK-SHRVEEARKLLDAMSM 667
Query: 244 GNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLEC 303
PN + +++ + +++ ++ + G A +SLI+ Y + R +
Sbjct: 668 EGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDL 727
Query: 304 ARKCFDLLFEKS----LVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLS 358
A K + E S +V ++D + + +DE + G TY ++
Sbjct: 728 ASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID 787
Query: 359 GAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVIT 418
G IG I ++ + G N LI K G + A + +M + T
Sbjct: 788 GFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPT 847
Query: 419 WTS----IISGFAKHGYAT-----------------------------KALELFYEMLE- 444
T+ +I GF K + + LE+ +LE
Sbjct: 848 HTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEE 907
Query: 445 -----TGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGR 499
+ TY +++ + ++ ++ F+ M GV+P ++ + ++ L R
Sbjct: 908 VATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTK-KGVIPEMQSFCSLIKGLFR 966
Query: 500 SGLLSEA---IEFINSMPL 515
+ +SEA ++FI+ M +
Sbjct: 967 NSKISEALLLLDFISHMEI 985
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 104/504 (20%), Positives = 191/504 (37%), Gaps = 68/504 (13%)
Query: 6 DLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVF 65
D+ ++ M+ F + +A F +M E G PN +TA + A + S +F
Sbjct: 517 DVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF 576
Query: 66 GSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKM-------------------- 105
++L G + V+ LID K G +E A ++FE+M
Sbjct: 577 ETMLSEGCLPNIVTYSA-LIDGHCKA-GQVEKACQIFERMCGSKDVPDVDMYFKQYDDNS 634
Query: 106 QERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGK 165
+ NVVT+ ++ F + E++ L M + G P++ + + ++ L +
Sbjct: 635 ERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQ 694
Query: 166 QLHSWVIRSGLALDLCVGCSLVDMYAKCAVD--GSLVDSRRVFNSMPEHNVVSWTALIAG 223
++ + + G L SL+D Y K S V S+ + NS NVV +T +I G
Sbjct: 695 EVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAP-NVVIYTEMIDG 753
Query: 224 YVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSA 283
+ G+ EA +L M + PN T+++++ + +L + G++
Sbjct: 754 LCK-VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAP 812
Query: 284 VNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHT 343
LI+ ++G L+ A +L + H HT
Sbjct: 813 NYVTYRVLIDHCCKNGALDVA-----------------------HNLLEEMKQTHWPTHT 849
Query: 344 TGIGACSFTYACLLSG--AACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNK 401
G Y ++ G I ++G ++I + LS+ LI K
Sbjct: 850 AG-------YRKVIEGFNKEFIESLGLLDEIG----QDDTAPFLSVYRLLIDNLIKAQRL 898
Query: 402 EAALQVFNDMGDRNVI------TWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYI 455
E AL++ ++ + T+ S+I A +LF EM + GV P ++
Sbjct: 899 EMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFC 958
Query: 456 AVLSACSHVGLIDEGWKHFNSMRH 479
+++ I E + + H
Sbjct: 959 SLIKGLFRNSKISEALLLLDFISH 982
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 120/525 (22%), Positives = 227/525 (43%), Gaps = 59/525 (11%)
Query: 2 GSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVG 61
G ++V++C++++ F A F M + G P+ ++ + + +G
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMG 340
Query: 62 RVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQ----ERNVVTWNLMM 117
+F L G V V ID++VK GD+ +A V+++M NVVT+ +++
Sbjct: 341 HKLFSQALHKG-VKLDVVVFSSTIDVYVKS-GDLATASVVYKRMLCQGISPNVVTYTILI 398
Query: 118 TRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLA 177
Q G ++ ++ ++L G P T +S + + L G L+ +I+ G
Sbjct: 399 KGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYP 458
Query: 178 LDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH----NVVSWTALIAGYVRGSGQEQE 233
D+ + LVD +K G ++ + R M NVV + +LI G+ R + E
Sbjct: 459 PDVVIYGVLVDGLSK---QGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR-LNRFDE 514
Query: 234 AMRLFCDMLQGNVAPNGFTFSSVLKA-------CANL-PDFGFGEQLHSQTIKLGLSAVN 285
A+++F M + P+ TF++V++ C ++ P G QL + +SA
Sbjct: 515 ALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGL--QLFDLMQRNKISADI 572
Query: 286 CVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTG 345
V N +I++ + R+E A K F+ L E + D++
Sbjct: 573 AVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEP-----DIV------------------- 608
Query: 346 IGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAAL 405
TY ++ G + + + E+I L+ + F N LI + K + + A+
Sbjct: 609 ------TYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAI 662
Query: 406 QVFNDMGDR----NVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSAC 461
++F+ M ++ N +T+ ++ F+K + +LF EM E G+ P+ V+Y ++
Sbjct: 663 RMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGL 722
Query: 462 SHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEA 506
G +DE F+ ++P V YA ++ + G L EA
Sbjct: 723 CKRGRVDEATNIFHQAIDAK-LLPDVVAYAILIRGYCKVGRLVEA 766
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 123/533 (23%), Positives = 220/533 (41%), Gaps = 79/533 (14%)
Query: 58 FSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMM 117
F VG V VLK G + V L+ + V CG NVVT+ ++
Sbjct: 248 FRVGIVSCNKVLK-GLSVDQIEVASRLLSL-VLDCG------------PAPNVVTFCTLI 293
Query: 118 TRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLA 177
F + G + + DLF M G PD ++ + + +L +G +L S + G+
Sbjct: 294 NGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVK 353
Query: 178 LDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSM----PEHNVVSWTALIAGYVRGSGQEQE 233
LD+ V S +D+Y K G L + V+ M NVV++T LI G + G+ E
Sbjct: 354 LDVVVFSSTIDVYVK---SGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ-DGRIYE 409
Query: 234 AMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLIN 293
A ++ +L+ + P+ T+SS++ + G L+ IK+G + L++
Sbjct: 410 AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469
Query: 294 MYARSG-RLECARKCFDLLFEK---SLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGA 348
++ G L R +L + ++V +++D R DE L GI
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529
Query: 349 CSFTYACLLSGAACIGTIGK------GEQIHALVVKSGFETNLSINNALISMYSKCGNKE 402
T+ ++ + K G Q+ L+ ++ ++++ N +I + KC E
Sbjct: 530 DVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIE 589
Query: 403 AALQVFNDM----GDRNVITWTSIISGF-------------------------------- 426
A + FN++ + +++T+ ++I G+
Sbjct: 590 DASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILI 649
Query: 427 ---AKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGV 483
K+ A+ +F M E G KPN VTY ++ S I+ +K F M+ G+
Sbjct: 650 HVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQE-KGI 708
Query: 484 VPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDA----DAMVWRSLL-GSCRV 531
P + Y+ ++D L + G + EA + +DA D + + L+ G C+V
Sbjct: 709 SPSIVSYSIIIDGLCKRGRVDEATNIFHQ-AIDAKLLPDVVAYAILIRGYCKV 760
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 135/300 (45%), Gaps = 19/300 (6%)
Query: 246 VAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECAR 305
V+ +GF ++ F + + ++G+ + N V L ++E A
Sbjct: 217 VSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-----SVDQIEVAS 271
Query: 306 KCFDLLFE----KSLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSGA 360
+ L+ + ++V+ T+++ + D + + GI Y+ L+ G
Sbjct: 272 RLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGY 331
Query: 361 ACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMG----DRNV 416
G +G G ++ + + G + ++ + ++ I +Y K G+ A V+ M NV
Sbjct: 332 FKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNV 391
Query: 417 ITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNS 476
+T+T +I G + G +A ++ ++L+ G++P+ VTY +++ G + G+ +
Sbjct: 392 VTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYED 451
Query: 477 MRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSM---PLDADAMVWRSLL-GSCRVH 532
M G P V Y +VD L + GL+ A+ F M + + +V+ SL+ G CR++
Sbjct: 452 MIK-MGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLN 510
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 10/169 (5%)
Query: 342 HTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNK 401
+G+ A F L C G + K H LV++ GF + N ++ S
Sbjct: 213 EPSGVSAHGFVLDALF----CKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLS-VDQI 267
Query: 402 EAALQVFNDMGD----RNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAV 457
E A ++ + + D NV+T+ ++I+GF K G +A +LF M + G++P+ + Y +
Sbjct: 268 EVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTL 327
Query: 458 LSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEA 506
+ G++ G K F+ H GV V ++ +DV +SG L+ A
Sbjct: 328 IDGYFKAGMLGMGHKLFSQALH-KGVKLDVVVFSSTIDVYVKSGDLATA 375
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/451 (24%), Positives = 201/451 (44%), Gaps = 32/451 (7%)
Query: 36 HGFYPNEYCFTAALRACSNSLY-FSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKG--- 91
HGF P + A L A S S VF +L +S VS ++ ++G
Sbjct: 163 HGFMPGVLSYNAVLDATIRSKRNISFAENVFKEML-----ESQVSPNVFTYNILIRGFCF 217
Query: 92 CGDIESAHRVFEKMQER----NVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFT 147
G+I+ A +F+KM+ + NVVT+N ++ + ++ +D L M L G P+ +
Sbjct: 218 AGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLIS 277
Query: 148 LTSALTA-CAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVF 206
+ C E + V L + + R G +LD +L+ Y K +G+ + +
Sbjct: 278 YNVVINGLCREGRMKEVSFVL-TEMNRRGYSLDEVTYNTLIKGYCK---EGNFHQALVMH 333
Query: 207 NSMPEH----NVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACAN 262
M H +V+++T+LI + +G AM M + PN T+++++ +
Sbjct: 334 AEMLRHGLTPSVITYTSLIHSMCK-AGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQ 392
Query: 263 LPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSL----VS 318
++ + G S N+LIN + +G++E A + + EK L VS
Sbjct: 393 KGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVS 452
Query: 319 CETIVDVIVRDLNSDETLNHETEHT-TGIGACSFTYACLLSGAACIGTIGKGEQIHALVV 377
T++ R + DE L + E GI + TY+ L+ G + ++ ++
Sbjct: 453 YSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEML 512
Query: 378 KSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDR----NVITWTSIISGFAKHGYAT 433
+ G + ALI+ Y G+ E ALQ+ N+M ++ +V+T++ +I+G K
Sbjct: 513 RVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTR 572
Query: 434 KALELFYEMLETGVKPNDVTYIAVLSACSHV 464
+A L ++ P+DVTY ++ CS++
Sbjct: 573 EAKRLLLKLFYEESVPSDVTYHTLIENCSNI 603
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 181/430 (42%), Gaps = 24/430 (5%)
Query: 179 DLCVGCSLV-DMYAKCAVDGSLVDSR-------RVFNSMPEHNVVSWTALIAGYVRGSGQ 230
DLC S V D+ K SL+D + MP V+S+ A++ +R
Sbjct: 128 DLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMP--GVLSYNAVLDATIRSKRN 185
Query: 231 EQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANS 290
A +F +ML+ V+PN FT++ +++ + L + G N+
Sbjct: 186 ISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNT 245
Query: 291 LINMYARSGRLECARKCFDLL----FEKSLVSCETIVDVIVRDLNSDETLNHETE-HTTG 345
LI+ Y + +++ K + E +L+S +++ + R+ E TE + G
Sbjct: 246 LIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRG 305
Query: 346 IGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAAL 405
TY L+ G G + +HA +++ G ++ +LI K GN A+
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAM 365
Query: 406 QVFNDMGDR----NVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSAC 461
+ + M R N T+T+++ GF++ GY +A + EM + G P+ VTY A+++
Sbjct: 366 EFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGH 425
Query: 462 SHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSM---PLDAD 518
G +++ M+ G+ P V Y+ ++ RS + EA+ M + D
Sbjct: 426 CVTGKMEDAIAVLEDMKE-KGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPD 484
Query: 519 AMVWRSLL-GSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRK 577
+ + SL+ G C E + +M+ P D TY L N Y E +
Sbjct: 485 TITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHN 544
Query: 578 TMKQKKIIKE 587
M +K ++ +
Sbjct: 545 EMVEKGVLPD 554
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/465 (20%), Positives = 200/465 (43%), Gaps = 58/465 (12%)
Query: 84 LIDMFVKGCGDIESAHRVFEKMQER----NVVTWNLMMTRFAQMGYPEDSIDLFFRMLLS 139
++D ++ +I A VF++M E NV T+N+++ F G + ++ LF +M
Sbjct: 175 VLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETK 234
Query: 140 GYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSL 199
G P+ T + + +L + G +L + GL
Sbjct: 235 GCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGL----------------------- 271
Query: 200 VDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKA 259
E N++S+ +I G R G+ +E + +M + + + T+++++K
Sbjct: 272 -----------EPNLISYNVVINGLCR-EGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKG 319
Query: 260 CANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSC 319
+F +H++ ++ GL+ SLI+ ++G + A + D + + L
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPN 379
Query: 320 ETIVDVIVRDLNSDETLNHETE-----HTTGIGACSFTYACLLSGAACIGTIGKGEQIHA 374
E +V + +N + G TY L++G G + +
Sbjct: 380 ERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLE 439
Query: 375 LVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNV----ITWTSIISGFAKHG 430
+ + G ++ + ++S + + + + AL+V +M ++ + IT++S+I GF +
Sbjct: 440 DMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQR 499
Query: 431 YATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHY 490
+A +L+ EML G+ P++ TY A+++A G +++ + N M GV+P V Y
Sbjct: 500 RTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE-KGVLPDVVTY 558
Query: 491 ACMVDVLGRSGLLSEAIEFI------NSMPLDADAMVWRSLLGSC 529
+ +++ L + EA + S+P D + + +L+ +C
Sbjct: 559 SVLINGLNKQSRTREAKRLLLKLFYEESVPSD---VTYHTLIENC 600
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 110/527 (20%), Positives = 210/527 (39%), Gaps = 102/527 (19%)
Query: 2 GSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVG 61
G D V++ +++ + H+ALV +ML HG P+ +T+ + + + ++
Sbjct: 305 GYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA--GNMN 362
Query: 62 RVV-FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQER----NVVTWNLM 116
R + F ++ + L+D F + G + A+RV +M + +VVT+N +
Sbjct: 363 RAMEFLDQMRVRGLCPNERTYTTLVDGFSQK-GYMNEAYRVLREMNDNGFSPSVVTYNAL 421
Query: 117 MTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGL 176
+ G ED+I + M G +PD + ++ L SG
Sbjct: 422 INGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL---------------------SGF 460
Query: 177 ALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMR 236
C D VD +L R + + + +++++LI G+ + +EA
Sbjct: 461 -------CRSYD------VDEALRVKREMVEKGIKPDTITYSSLIQGFCE-QRRTKEACD 506
Query: 237 LFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYA 296
L+ +ML+ + P+ FT+++++ A D QLH++ ++ G+ + LIN
Sbjct: 507 LYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLN 566
Query: 297 RSGRL-ECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYAC 355
+ R E R L +E+S + SD T + E+ + I S
Sbjct: 567 KQSRTREAKRLLLKLFYEES--------------VPSDVTYHTLIENCSNIEFKSV--VS 610
Query: 356 LLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRN 415
L+ G G + + +Q+ FE+ L N+ +
Sbjct: 611 LIKGFCMKGMMTEADQV--------FESMLGKNHK-----------------------PD 639
Query: 416 VITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFN 475
+ +I G + G KA L+ EM+++G + VT IA++ A G ++E N
Sbjct: 640 GTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE----LN 695
Query: 476 S-----MRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDA 517
S +R C + E +V++ R G + ++ + M D
Sbjct: 696 SVIVHVLRSCE--LSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDG 740
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 171/381 (44%), Gaps = 70/381 (18%)
Query: 64 VFGSVLKTGYFDSHVSVGCELIDM-------FVKGC---GDIESAHRVFEKMQERNVVTW 113
+FG + G S V CE+++ + G D+ SA R F+ ER++V W
Sbjct: 34 LFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLW 93
Query: 114 NLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIR 173
N M++ + +MG ++ LF +M C + + SW
Sbjct: 94 NTMISGYIEMGNMLEARSLFDQM-----------------PC---------RDVMSW--- 124
Query: 174 SGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQE 233
++++ YA G + RVF+ MPE NV SW LI GY + +G+ E
Sbjct: 125 ----------NTVLEGYANI---GDMEACERVFDDMPERNVFSWNGLIKGYAQ-NGRVSE 170
Query: 234 AMRLFCDML-QGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNC-VANSL 291
+ F M+ +G+V PN T + VL ACA L F FG+ +H LG + V+ V N+L
Sbjct: 171 VLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNAL 230
Query: 292 INMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN--HETEHTTGIGAC 349
I+MY + G +E A + F + + L+S T+++ + + E LN HE ++ +GI
Sbjct: 231 IDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKN-SGISPD 289
Query: 350 SFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSIN------NALISMYSKCGNKEA 403
T+ +L +G + G L + T+ SI ++ + S+ G
Sbjct: 290 KVTFVGVLCACKHMGLVEDG-----LAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQ 344
Query: 404 ALQVFNDMGDR-NVITWTSII 423
A++ N M + + + W +++
Sbjct: 345 AVEFINKMPVKADAVIWATLL 365
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 110/225 (48%), Gaps = 11/225 (4%)
Query: 4 KRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHG-FYPNEYCFTAALRACSNSLYFSVGR 62
+R++ SW ++ +A N E L +F M++ G PN+ T L AC+ F G+
Sbjct: 149 ERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGK 208
Query: 63 VV--FGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRF 120
V +G L GY V+V LIDM+ K CG IE A VF+ ++ R++++WN M+
Sbjct: 209 WVHKYGETL--GYNKVDVNVKNALIDMYGK-CGAIEIAMEVFKGIKRRDLISWNTMINGL 265
Query: 121 AQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDL 180
A G+ ++++LF M SG +PD+ T L AC + L+ G + + +
Sbjct: 266 AAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPE 325
Query: 181 CVGCS-LVDMYAKCAVDGSLVDSRRVFNSMP-EHNVVSWTALIAG 223
C +VD+ ++ G L + N MP + + V W L+
Sbjct: 326 IEHCGCVVDLLSRA---GFLTQAVEFINKMPVKADAVIWATLLGA 367
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 180/402 (44%), Gaps = 21/402 (5%)
Query: 128 DSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLV 187
+++DLF M+ S P T L A+++ V L + G++ DL C+L+
Sbjct: 55 EALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYT-CNLL 113
Query: 188 DMYAKCAVDGSLVDSRRVFNSMP---EHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQG 244
M C + S + M E ++V++T+LI G+ G+ E EAM + M++
Sbjct: 114 -MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME-EAMSMVNQMVEM 171
Query: 245 NVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECA 304
+ P+ +++++ + + L Q G+ + SL+N SGR A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 305 RKCFDLLFEKSL----VSCETIVDVIVRD---LNSDETLNHETEHTTGIGACSFTYACLL 357
+ ++ + ++ ++D V++ L+++E N + I FTY L+
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMS--IAPNIFTYTSLI 289
Query: 358 SGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDR--- 414
+G G + + Q+ L+ G ++ +LI+ + KC + A+++F +M +
Sbjct: 290 NGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLT 349
Query: 415 -NVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKH 473
N IT+T++I GF + G A E+F M+ GV PN TY +L + G + +
Sbjct: 350 GNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMI 409
Query: 474 FNSM--RHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSM 513
F M R GV P + Y ++ L +G L +A+ M
Sbjct: 410 FEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM 451
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 98/425 (23%), Positives = 188/425 (44%), Gaps = 21/425 (4%)
Query: 109 NVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLH 168
++ T NL+M F Q P + +M+ G+ PD T TS + + +
Sbjct: 106 DLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMV 165
Query: 169 SWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH----NVVSWTALIAGY 224
+ ++ G+ D+ + +++D K +G + + +F+ M + +VV +T+L+ G
Sbjct: 166 NQMVEMGIKPDVVMYTTIIDSLCK---NGHVNYALSLFDQMENYGIRPDVVMYTSLVNGL 222
Query: 225 VRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAV 284
SG+ ++A L M + + P+ TF++++ A F E+L+++ I++ ++
Sbjct: 223 C-NSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPN 281
Query: 285 NCVANSLINMYARSGRLECARKCFDLLFEKS----LVSCETIVDVIVRDLNSDETLNHET 340
SLIN + G ++ AR+ F L+ K +V+ ++++ + D+ +
Sbjct: 282 IFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFY 341
Query: 341 EHT-TGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCG 399
E + G+ + TY L+ G +G +++ + +V G N+ N L+ G
Sbjct: 342 EMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNG 401
Query: 400 NKEAALQVFNDMGDR-------NVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDV 452
+ AL +F DM R N+ T+ ++ G +G KAL +F +M + + +
Sbjct: 402 KVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGII 461
Query: 453 TYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINS 512
TY ++ G + F S+ GV P V Y M+ L R GL EA
Sbjct: 462 TYTIIIQGMCKAGKVKNAVNLFCSLPS-KGVKPNVVTYTTMISGLFREGLKHEAHVLFRK 520
Query: 513 MPLDA 517
M D
Sbjct: 521 MKEDG 525
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/459 (20%), Positives = 197/459 (42%), Gaps = 45/459 (9%)
Query: 1 MGSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSV 60
MG DL + +M+CF +S + A M++ GF P+ FT+ +
Sbjct: 101 MGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEE 160
Query: 61 GRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQ----ERNVVTWNLM 116
+ +++ G V + +ID K G + A +F++M+ +VV + +
Sbjct: 161 AMSMVNQMVEMG-IKPDVVMYTTIIDSLCKN-GHVNYALSLFDQMENYGIRPDVVMYTSL 218
Query: 117 MTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGL 176
+ G D+ L M PD T + + A + ++L++ +IR +
Sbjct: 219 VNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSI 278
Query: 177 ALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH----NVVSWTALIAGYVRGSGQEQ 232
A ++ SL++ + ++G + ++R++F M +VV++T+LI G+ + +
Sbjct: 279 APNIFTYTSLINGFC---MEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCK-CKKVD 334
Query: 233 EAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLI 292
+AM++F +M Q + N T++++++ + +++ S + G+ N L+
Sbjct: 335 DAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLL 394
Query: 293 NMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFT 352
+ +G+++ A F+ D+ R+++ G+ +T
Sbjct: 395 HCLCYNGKVKKALMIFE--------------DMQKREMD-------------GVAPNIWT 427
Query: 353 YACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMG 412
Y LL G G + K + + K + + +I K G + A+ +F +
Sbjct: 428 YNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLP 487
Query: 413 DR----NVITWTSIISGFAKHGYATKALELFYEMLETGV 447
+ NV+T+T++ISG + G +A LF +M E GV
Sbjct: 488 SKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 75/378 (19%), Positives = 150/378 (39%), Gaps = 14/378 (3%)
Query: 228 SGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCV 287
S Q EA+ LF M++ P+ F+ +L A + F L +G+S
Sbjct: 50 SLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYT 109
Query: 288 ANSLINMYARSGRLECAR----KCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHT 343
N L+N + +S + A K L FE +V+ ++++ +E ++ +
Sbjct: 110 CNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMV 169
Query: 344 -TGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKE 402
GI Y ++ G + + + G ++ + +L++ G
Sbjct: 170 EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWR 229
Query: 403 AALQVFNDMGDR----NVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVL 458
A + M R +VIT+ ++I F K G A EL+ EM+ + PN TY +++
Sbjct: 230 DADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI 289
Query: 459 SACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMP---L 515
+ G +DE + F M G P V Y +++ + + +A++ M L
Sbjct: 290 NGFCMEGCVDEARQMFYLM-ETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGL 348
Query: 516 DADAMVWRSLLGSCRVHGNTELGEHAAKMILERE-PHDPATYILLSNLYATEERWYDVAA 574
+ + + +L+ G + + ++ R P + TY +L + +
Sbjct: 349 TGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALM 408
Query: 575 IRKTMKQKKIIKEAGYSW 592
I + M+++++ A W
Sbjct: 409 IFEDMQKREMDGVAPNIW 426
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 167/407 (41%), Gaps = 22/407 (5%)
Query: 101 VFEKMQERNV----VTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACA 156
+FE+MQ + T N++M P + +M+ G+ PD T TS L
Sbjct: 105 LFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYC 164
Query: 157 ELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSM----PEH 212
+ L ++ G ++ +L+ K + L + +FN M
Sbjct: 165 HWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCK---NRHLNHAVELFNQMGTNGSRP 221
Query: 213 NVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQL 272
NVV++ AL+ G G+ +A L DM++ + PN TF++++ A + ++L
Sbjct: 222 NVVTYNALVTGLCE-IGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKEL 280
Query: 273 HSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNS 332
++ I++ + SLIN G L+ AR+ F L+ E I ++
Sbjct: 281 YNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCK 340
Query: 333 DETLNHETE-----HTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSI 387
+ + + G+ A + TY L+ G +G +++ + ++
Sbjct: 341 SKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRT 400
Query: 388 NNALISMYSKCGNKEAALQVFNDMGDR----NVITWTSIISGFAKHGYATKALELFYEML 443
N L+ G E AL +F M R N++T+T II G K G A +LF +
Sbjct: 401 YNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLF 460
Query: 444 ETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHY 490
G+KPN +TY ++S GLI E F M+ G +P Y
Sbjct: 461 SKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKE-DGFLPNESVY 506
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 98/439 (22%), Positives = 172/439 (39%), Gaps = 55/439 (12%)
Query: 128 DSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLV 187
D++DLF RM+ S P T L+ A++ V L + G+ LC C++V
Sbjct: 66 DALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCT-CNIV 124
Query: 188 DMYAKCAVDGSLVDSRRVFNSMP---EHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQG 244
M+ C S + M E ++V++T+L+ GY + E +A+ LF +L
Sbjct: 125 -MHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIE-DAIALFDQILGM 182
Query: 245 NVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECA 304
PN T++++++ +L +Q G N+L+ GR A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 305 ----RKCFDLLFEKSLVSCETIVDVIVRD---LNSDETLNHETEHTTGIGACSFTYACLL 357
R E ++++ ++D V+ + + E N + + + FTY L+
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMS--VYPDVFTYGSLI 300
Query: 358 SGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDR--- 414
+G G + + Q+ L+ ++G N I LI + K E +++F +M +
Sbjct: 301 NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV 360
Query: 415 -NVITWTSIISGFAKHGYATKALELFYEMLETGVKP------------------------ 449
N IT+T +I G+ G A E+F +M P
Sbjct: 361 ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMI 420
Query: 450 -----------NDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLG 498
N VTY ++ +G +++ + F S+ G+ P V Y M+
Sbjct: 421 FEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSL-FSKGMKPNVITYTTMISGFC 479
Query: 499 RSGLLSEAIEFINSMPLDA 517
R GL+ EA M D
Sbjct: 480 RRGLIHEADSLFKKMKEDG 498
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/401 (20%), Positives = 175/401 (43%), Gaps = 56/401 (13%)
Query: 1 MGSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRA-CSNSLYFS 59
+G + DLV++ S+++ + + + +A+ F +L GF PN +T +R C N
Sbjct: 147 LGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKN----- 201
Query: 60 VGRVVFGSVLKTGYFDSHVSVGCELID-MFVKGCGDIESAHRVFEKMQERNVVTWNLMMT 118
H++ EL + M G NVVT+N ++T
Sbjct: 202 ----------------RHLNHAVELFNQMGTNG--------------SRPNVVTYNALVT 231
Query: 119 RFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLAL 178
++G D+ L M+ P+ T T+ + A ++ L K+L++ +I+ +
Sbjct: 232 GLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYP 291
Query: 179 DLCVGCSLVD---MYAKCAVDGSLVDSRRVFNSMPEH----NVVSWTALIAGYVRGSGQE 231
D+ SL++ MY G L ++R++F M + N V +T LI G+ + S +
Sbjct: 292 DVFTYGSLINGLCMY------GLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCK-SKRV 344
Query: 232 QEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSL 291
++ M++F +M Q V N T++ +++ + +++ +Q N L
Sbjct: 345 EDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVL 404
Query: 292 INMYARSGRLECARKCFDLLFEK----SLVSCETIVDVIVRDLNSDETLN-HETEHTTGI 346
++ +G++E A F+ + ++ ++V+ I+ + + ++ + + + G+
Sbjct: 405 LDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGM 464
Query: 347 GACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSI 387
TY ++SG G I + + + + + GF N S+
Sbjct: 465 KPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESV 505
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 109/525 (20%), Positives = 215/525 (40%), Gaps = 49/525 (9%)
Query: 1 MGSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSV 60
+G +L ++ +++CF S AL M++ G+ P+ ++ L + S
Sbjct: 39 LGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISD 98
Query: 61 GRVVFGSVLKTGYFDSHVSVGCELIDMFV--KGCGDIESAHRVFEKMQERNVVTWNLMMT 118
+ +++ GY ++ + +F+ K + R+ ++ + N+VT+ +++
Sbjct: 99 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN 158
Query: 119 RFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLAL 178
+ G IDL F +L ++ + I +
Sbjct: 159 GLCKRG----DIDLAFNLL---------------------------NKMEAAKIEA---- 183
Query: 179 DLCVGCSLVDMYAKCA-VDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRL 237
D+ + +++D K VD +L + + NVV++++LI+ G+ +A +L
Sbjct: 184 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC-SYGRWSDASQL 242
Query: 238 FCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYAR 297
DM++ + PN TF++++ A F E+LH IK + NSLIN +
Sbjct: 243 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCM 302
Query: 298 SGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETE-----HTTGIGACSFT 352
RL+ A++ F+ + K + +++ + + TE G+ + T
Sbjct: 303 HDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 362
Query: 353 YACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMG 412
Y L+ G G +++ +V G ++ + L+ G E AL+VF+ M
Sbjct: 363 YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ 422
Query: 413 DR----NVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLID 468
++ +T++I G K G +LF + GVKPN VTY ++S L+
Sbjct: 423 KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQ 482
Query: 469 EGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSM 513
E + M+ G +P Y ++ R G + + E I M
Sbjct: 483 EAYALLKKMKE-DGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/393 (21%), Positives = 166/393 (42%), Gaps = 21/393 (5%)
Query: 241 MLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGR 300
M++ P+ F F+ +L A A + F L + +LG+S N LIN + R +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 301 LECAR----KCFDLLFEKSLVSCETIVDVIVRDLN-SDETLNHETEHTTGIGACSFTYAC 355
+ A K L +E S+V+ ++++ SD + G + T+
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 356 LLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMG--- 412
L+ G + + +V+ G + NL +++ K G+ + A + N M
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 413 -DRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGW 471
+ +V+ + +II K+ + AL LF EM G++PN VTY +++S G +
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 472 KHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSM---PLDADAMVWRSLLGS 528
+ + M + P + + ++D + G EA + + M +D D + SL+
Sbjct: 241 QLLSDMIE-KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLING 299
Query: 529 CRVHGNTELGEHAAKMILERE--PHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIK 586
+H + + + ++ ++ P D TY L + +R D + + M + ++
Sbjct: 300 FCMHDRLDKAKQMFEFMVSKDCFP-DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 358
Query: 587 EAGYSWIEVENQVHKFHVGDTSHPQAQKIYDEL 619
+ ++ FH GD + AQK++ ++
Sbjct: 359 DTVTYTTLIQGL---FHDGDCDN--AQKVFKQM 386
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 118/513 (23%), Positives = 221/513 (43%), Gaps = 90/513 (17%)
Query: 1 MGSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSV 60
+G + D+V+ S+++ + ++ +A+ M+E G+ P+ + FT + L+
Sbjct: 147 LGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF--LHNKA 204
Query: 61 GRVVFGSVLKTGYFDSHVSVGCELIDMFVKGC--------GDIESAHRVFEKMQ----ER 108
V D V GC+ D+ G GDI+ A + +KM+ E
Sbjct: 205 SEAV-------ALVDQMVQRGCQ-PDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA 256
Query: 109 NVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLH 168
+VV +N ++ + + +D+++LF M G PD FT +S L +C L + G+
Sbjct: 257 DVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSS-LISC----LCNYGR--- 308
Query: 169 SWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH----NVVSWTALIAGY 224
W D+ R+ + M E NVV+++ALI +
Sbjct: 309 -WS-----------------------------DASRLLSDMIERKINPNVVTFSALIDAF 338
Query: 225 VRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLH--SQTIKLGLS 282
V+ G+ EA +L+ +M++ ++ P+ FT+SS++ F ++L +L +S
Sbjct: 339 VK-EGKLVEAEKLYDEMIKRSIDPDIFTYSSLING------FCMHDRLDEAKHMFELMIS 391
Query: 283 AVNCVAN-----SLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIV------RDLN 331
+C N +LI + ++ R+E + F + ++ LV ++ RD +
Sbjct: 392 K-DCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 450
Query: 332 SDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNAL 391
+ + + + + G+ TY LL G G + K + + +S E ++ N +
Sbjct: 451 NAQMVFKQMV-SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 509
Query: 392 ISMYSKCGNKEAALQVFNDMGDR----NVITWTSIISGFAKHGYATKALELFYEMLETGV 447
I K G E ++F ++ + NVI + ++ISGF + G +A L +M E G
Sbjct: 510 IEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGP 569
Query: 448 KPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHC 480
PN TY ++ A G + + MR C
Sbjct: 570 LPNSGTYNTLIRARLRDGDREASAELIKEMRSC 602
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 108/508 (21%), Positives = 216/508 (42%), Gaps = 20/508 (3%)
Query: 25 EALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCEL 84
+A+ F DM++ +P+ F L A + F + + G ++T +
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFEL-VISLGEQMQTLGISHDLYTYSIF 124
Query: 85 IDMFVKGCGDIESAHRVFEKMQ----ERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSG 140
I+ F + + A V KM E ++VT + ++ + D++ L +M+ G
Sbjct: 125 INCFCRR-SQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 141 YTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCA-VDGSL 199
Y PD FT T+ + S L +++ G DL ++V+ K +D +L
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 200 VDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKA 259
+++ E +VV + +I G + + +A+ LF +M + P+ FT+SS++
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMD-DALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 260 CANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSC 319
N + +L S I+ ++ ++LI+ + + G+L A K +D + ++S+
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 320 ETIVDVIVRDLNSDETLNHETEHTTGIGACS------FTYACLLSGAACIGTIGKGEQIH 373
++ + L+ E +H + TY+ L+ G + +G ++
Sbjct: 363 IFTYSSLINGFCMHDRLD-EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELF 421
Query: 374 ALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGD----RNVITWTSIISGFAKH 429
+ + G N LI + + + + A VF M N++T+ ++ G K+
Sbjct: 422 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 481
Query: 430 GYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEH 489
G KA+ +F + + ++P+ TY ++ G +++GW+ F ++ GV P V
Sbjct: 482 GKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL-SLKGVSPNVIA 540
Query: 490 YACMVDVLGRSGLLSEAIEFINSMPLDA 517
Y M+ R G EA + M D
Sbjct: 541 YNTMISGFCRKGSKEEADSLLKKMKEDG 568
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 159/366 (43%), Gaps = 14/366 (3%)
Query: 233 EAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLI 292
+A+ LF DM++ P+ F+ +L A A + F L Q LG+S + I
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 293 NMYARSGRLECA----RKCFDLLFEKSLVSCETIVDVIVRDLN-SDETLNHETEHTTGIG 347
N + R +L A K L +E +V+ ++++ SD + G
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185
Query: 348 ACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQV 407
+FT+ L+ G + + +V+ G + +L +++ K G+ + AL +
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSL 245
Query: 408 FNDMG----DRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSH 463
M + +V+ + +II G K+ + AL LF EM G++P+ TY +++S +
Sbjct: 246 LKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 305
Query: 464 VGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSM---PLDADAM 520
G + + + M + P V ++ ++D + G L EA + + M +D D
Sbjct: 306 YGRWSDASRLLSDMIE-RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 364
Query: 521 VWRSLLGSCRVHGNTELGEHAAKMILEREPH-DPATYILLSNLYATEERWYDVAAIRKTM 579
+ SL+ +H + +H ++++ ++ + TY L + +R + + + M
Sbjct: 365 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM 424
Query: 580 KQKKII 585
Q+ ++
Sbjct: 425 SQRGLV 430
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/486 (21%), Positives = 202/486 (41%), Gaps = 52/486 (10%)
Query: 44 CFTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKG--CGDIESAHRV 101
CF + C L FS G ++K GY + ++ + + ++G +E R+
Sbjct: 132 CFCRCRKLC---LAFSA----MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRM 184
Query: 102 FEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELL 161
E + +++T N ++ G +++ L +M+ G P+ T L +
Sbjct: 185 VEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQT 244
Query: 162 SVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH----NVVSW 217
++ +L + + LD ++D K GSL ++ +FN M N++++
Sbjct: 245 ALAMELLRKMEERNIKLDAVKYSIIIDGLCK---HGSLDNAFNLFNEMEMKGITTNIITY 301
Query: 218 TALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTI 277
LI G+ +G+ + +L DM++ + PN TFS ++ + E+LH + I
Sbjct: 302 NILIGGFC-NAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMI 360
Query: 278 KLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLN 337
G++ SLI+ + + L+ A + DL+ K D +R
Sbjct: 361 HRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG-------CDPNIR--------- 404
Query: 338 HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSK 397
T+ L++G I G ++ + G + N LI + +
Sbjct: 405 --------------TFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 450
Query: 398 CGNKEAALQVFNDMGDR----NVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVT 453
G A ++F +M R N++T+ ++ G +G + KALE+F ++ ++ ++ +
Sbjct: 451 LGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGI 510
Query: 454 YIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSM 513
Y ++ + +D+ W F S+ GV P V+ Y M+ L + G LSEA M
Sbjct: 511 YNIIIHGMCNASKVDDAWDLFCSL-PLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKM 569
Query: 514 PLDADA 519
D A
Sbjct: 570 EEDGHA 575
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 97/491 (19%), Positives = 187/491 (38%), Gaps = 81/491 (16%)
Query: 1 MGSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSV 60
MG K DL++ ++++ + E EA++ M+E+G PN + L S
Sbjct: 187 MGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKS----- 241
Query: 61 GRVVFGSVLKTGYFDSHVSVGCELIDMFVKGC---GDIESAHRVFEKMQER----NVVTW 113
G+ L + ++ + + + G G +++A +F +M+ + N++T+
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITY 301
Query: 114 NLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIR 173
N+++ F G +D L M+ P+ T + + + + L ++LH +I
Sbjct: 302 NILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIH 361
Query: 174 SGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQE 233
G+A D +++T+LI G+ + +
Sbjct: 362 RGIAPD----------------------------------TITYTSLIDGFCK-ENHLDK 386
Query: 234 AMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLIN 293
A ++ M+ PN TF+ ++ G +L + G+ A N+LI
Sbjct: 387 ANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQ 446
Query: 294 MYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTY 353
+ G+L A++ F + +VS + +++ TY
Sbjct: 447 GFCELGKLNVAKELF-----QEMVSRKVPPNIV-------------------------TY 476
Query: 354 ACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGD 413
LL G G K +I + KS E ++ I N +I + A +F +
Sbjct: 477 KILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 536
Query: 414 R----NVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDE 469
+ V T+ +I G K G ++A LF +M E G P+ TY ++ A G +
Sbjct: 537 KGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATK 596
Query: 470 GWKHFNSMRHC 480
K ++ C
Sbjct: 597 SVKLIEELKRC 607
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 81/384 (21%), Positives = 155/384 (40%), Gaps = 19/384 (4%)
Query: 186 LVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGN 245
LVD+ A A+D R + +S P V+ ++ L + + + Q + L M
Sbjct: 64 LVDIKADDAIDLF----RDMIHSRPLPTVIDFSRLFSAIAK-TKQYDLVLALCKQMELKG 118
Query: 246 VAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECAR 305
+A N +T S ++ + IKLG ++LIN GR+ A
Sbjct: 119 IAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEAL 178
Query: 306 KCFDLLFE----KSLVSCETIVD-VIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGA 360
+ D + E L++ T+V+ + + ++ L + G + TY +L+
Sbjct: 179 ELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVM 238
Query: 361 ACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDR----NV 416
G ++ + + + + + +I K G+ + A +FN+M + N+
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNI 298
Query: 417 ITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNS 476
IT+ +I GF G +L +M++ + PN VT+ ++ + G + E +
Sbjct: 299 ITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKE 358
Query: 477 MRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSM---PLDADAMVWRSLL-GSCRVH 532
M H G+ P Y ++D + L +A + ++ M D + + L+ G C+ +
Sbjct: 359 MIH-RGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKAN 417
Query: 533 GNTELGEHAAKMILEREPHDPATY 556
+ E KM L D TY
Sbjct: 418 RIDDGLELFRKMSLRGVVADTVTY 441
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 152/357 (42%), Gaps = 43/357 (12%)
Query: 379 SGFETNLSINNALISMYSKCGNKEAALQVFNDMG-------DRNVITWTSIISGFAKHGY 431
G NL + +I+ + +C F+ MG + N IT++++I+G G
Sbjct: 117 KGIAHNLYTLSIMINCFCRC---RKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 173
Query: 432 ATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYA 491
++ALEL M+E G KP+ +T +++ G E + M +G P Y
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVE-YGCQPNAVTYG 232
Query: 492 CMVDVLGRSGLLSEAIEFINSMP---LDADAMVWRSLLGSCRVHGNTELGEHAAKMILER 548
+++V+ +SG + A+E + M + DA+ + ++ HG+ + +A + E
Sbjct: 233 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLD---NAFNLFNEM 289
Query: 549 EPHDPATYILLSNL----YATEERWYDVAAIRKTMKQKKIIKEAGYSWIEVENQVHKFHV 604
E T I+ N+ + RW D A + + M ++KI V F V
Sbjct: 290 EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKI-----------NPNVVTFSV 338
Query: 605 GDTSHPQAQKIYDELDELASKIKKLGYVPNTDFVLHDVEDEQKEQYLFQHSEKIAVAFAL 664
S + K+ E +EL ++ G P+T ++ KE +L + ++ + + +
Sbjct: 339 LIDSFVKEGKLR-EAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSK 397
Query: 665 ISIPNPKPIRIFKNLRVCGDCHT-----AIKYISKVTGRVIVVRDANRFHHIKDGTC 716
PN IR F N+ + G C ++ K++ R VV D ++ + G C
Sbjct: 398 GCDPN---IRTF-NILINGYCKANRIDDGLELFRKMSLRG-VVADTVTYNTLIQGFC 449
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 118/528 (22%), Positives = 212/528 (40%), Gaps = 55/528 (10%)
Query: 1 MGSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSV 60
+G + ++ +++CF S AL M++ G+ PN
Sbjct: 110 LGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPN------------------- 150
Query: 61 GRVVFGSVLKTGYFDS-HVSVGCELID-MFVKGCGDIESAHRVFEKMQERNVVTWNLMMT 118
+V S L GY S +S L+D MFV G + N VT+N ++
Sbjct: 151 --IVTLSSLLNGYCHSKRISEAVALVDQMFVTG--------------YQPNTVTFNTLIH 194
Query: 119 RFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLAL 178
+++ L RM+ G PD T + + + L + + + L
Sbjct: 195 GLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEP 254
Query: 179 DLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH----NVVSWTALIAGYVRGSGQEQEA 234
+ + +++D K + D+ +F M NVV++++LI+ G+ +A
Sbjct: 255 GVLIYNTIIDGLCKYK---HMDDALNLFKEMETKGIRPNVVTYSSLISCLC-NYGRWSDA 310
Query: 235 MRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINM 294
RL DM++ + P+ FTFS+++ A E+L+ + +K + +SLIN
Sbjct: 311 SRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLING 370
Query: 295 YARSGRLECARKCFDLLFEK----SLVSCETIVDVIVRDLNSDETLNHETEHTT-GIGAC 349
+ RL+ A++ F+ + K +V+ T++ + +E + E + G+
Sbjct: 371 FCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 430
Query: 350 SFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFN 409
+ TY L+ G G ++I +V G N+ N L+ K G E A+ VF
Sbjct: 431 TVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFE 490
Query: 410 DMG----DRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVG 465
+ + + T+ +I G K G +LF + GVKP+ V Y ++S G
Sbjct: 491 YLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKG 550
Query: 466 LIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSM 513
+E F M+ G +P Y ++ R G + E I M
Sbjct: 551 SKEEADALFKEMKE-DGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 171/401 (42%), Gaps = 21/401 (5%)
Query: 233 EAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLI 292
+A+ LF +M++ P+ FS +L A A + F L Q LG+ + + LI
Sbjct: 64 DAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILI 123
Query: 293 NMYARSGRLECAR----KCFDLLFEKSLVSCETIVDVIVRDLNSDETLNH-ETEHTTGIG 347
N + R +L A K L +E ++V+ ++++ E + + TG
Sbjct: 124 NCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQ 183
Query: 348 ACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQV 407
+ T+ L+ G + + +V G + +L +++ K G+ + A +
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNL 243
Query: 408 FNDMG----DRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSH 463
N M + V+ + +II G K+ + AL LF EM G++PN VTY +++S +
Sbjct: 244 LNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCN 303
Query: 464 VGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSM---PLDADAM 520
G + + + M + P V ++ ++D + G L EA + + M +D +
Sbjct: 304 YGRWSDASRLLSDMIE-RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV 362
Query: 521 VWRSLLGSCRVHGNTELGEHAAKMILERE--PHDPATYILLSNLYATEERWYDVAAIRKT 578
+ SL+ +H + + + ++ + P D TY L + +R + + +
Sbjct: 363 TYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP-DVVTYNTLIKGFCKYKRVEEGMEVFRE 421
Query: 579 MKQKKIIKEAGYSWIEVENQVHKFHVGDTSHPQAQKIYDEL 619
M Q+ ++ I ++ F GD AQ+I+ E+
Sbjct: 422 MSQRGLVGNTVTYNILIQGL---FQAGDCD--MAQEIFKEM 457
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 162/365 (44%), Gaps = 40/365 (10%)
Query: 135 RMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCA 194
+M+ GY PD T++S + + + L S + G D+ + +++D C
Sbjct: 129 KMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIID--GSCK 186
Query: 195 VDGSLVDSRRVFNSMPEHNV----VSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNG 250
+ G + D+ +F+ M V V++ +L+AG SG+ +A RL DM+ ++ PN
Sbjct: 187 I-GLVNDAVELFDRMERDGVRADAVTYNSLVAGLC-CSGRWSDAARLMRDMVMRDIVPNV 244
Query: 251 FTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDL 310
TF++V+ F +L+ + + + NSLIN GR++ A++ DL
Sbjct: 245 ITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDL 304
Query: 311 LFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGE 370
+ K + DV+ TY L++G + +G
Sbjct: 305 MVTKGCLP-----DVV-------------------------TYNTLINGFCKSKRVDEGT 334
Query: 371 QIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDR-NVITWTSIISGFAKH 429
++ + + G + N +I Y + G +AA ++F+ M R N+ T++ ++ G +
Sbjct: 335 KLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMN 394
Query: 430 GYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEH 489
KAL LF M ++ ++ + TY V+ +G +++ W F S+ C G+ P V
Sbjct: 395 WRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSL-SCKGLKPDVVS 453
Query: 490 YACMV 494
Y M+
Sbjct: 454 YTTMI 458
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 161/353 (45%), Gaps = 14/353 (3%)
Query: 107 ERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQ 166
E +VVT + ++ F Q D+IDL +M G+ PD + + ++ L++ +
Sbjct: 136 EPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVE 195
Query: 167 LHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH----NVVSWTALIA 222
L + R G+ D SLV A G D+ R+ M NV+++TA+I
Sbjct: 196 LFDRMERDGVRADAVTYNSLV---AGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVID 252
Query: 223 GYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLS 282
+V+ G+ EAM+L+ +M + V P+ FT++S++ +Q+ + G
Sbjct: 253 VFVK-EGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCL 311
Query: 283 AVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEH 342
N+LIN + +S R++ K F + ++ LV + I++ + E
Sbjct: 312 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEI 371
Query: 343 TTGIGACS--FTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGN 400
+ + + TY+ LL G + K + + KS E +++ N +I K GN
Sbjct: 372 FSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGN 431
Query: 401 KEAALQVFNDMGDR----NVITWTSIISGFAKHGYATKALELFYEMLETGVKP 449
E A +F + + +V+++T++ISGF + K+ L+ +M E G+ P
Sbjct: 432 VEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 149/359 (41%), Gaps = 23/359 (6%)
Query: 226 RGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQL--HSQTIKLG--L 281
R S +E + LFC M+Q P+ FS VL A ++ L H + +G L
Sbjct: 45 RSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDL 104
Query: 282 SAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETE 341
+ N V N L L K +E +V+ ++++ + + ++ ++
Sbjct: 105 YSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSK 164
Query: 342 -HTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGN 400
G Y ++ G+ IG + ++ + + G + N+L++ G
Sbjct: 165 MEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGR 224
Query: 401 KEAALQVFNDMGDR----NVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIA 456
A ++ DM R NVIT+T++I F K G ++A++L+ EM V P+ TY +
Sbjct: 225 WSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNS 284
Query: 457 VLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMP-- 514
+++ G +DE + + M G +P V Y +++ +S + E + M
Sbjct: 285 LINGLCMHGRVDEAKQMLDLM-VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR 343
Query: 515 -LDADAMVWRSLLGSCRVHGNTELGE-HAAKMILEREPHDP--ATYILLSNLYATEERW 569
L D + + ++ + G + G AA+ I R P TY +L LY W
Sbjct: 344 GLVGDTITYNTI-----IQGYFQAGRPDAAQEIFSRMDSRPNIRTYSIL--LYGLCMNW 395
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 154/352 (43%), Gaps = 17/352 (4%)
Query: 175 GLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH----NVVSWTALIAGYVRGSGQ 230
G +LD+ SL+ +A G ++ VF M E ++++ ++ + +
Sbjct: 203 GFSLDVYSYTSLISAFANS---GRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTP 259
Query: 231 EQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANS 290
+ L M +AP+ +T+++++ C Q+ + G S N+
Sbjct: 260 WNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNA 319
Query: 291 LINMYARSGRLECARKCFDLL----FEKSLVSCETIVDVIVRDLNSDETLNHETEHT-TG 345
L+++Y +S R + A K + + F S+V+ +++ RD DE + + + G
Sbjct: 320 LLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKG 379
Query: 346 IGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAAL 405
FTY LLSG G + I + +G + N+ NA I MY G +
Sbjct: 380 TKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMM 439
Query: 406 QVFNDMG----DRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSAC 461
++F+++ +++TW ++++ F ++G ++ +F EM G P T+ ++SA
Sbjct: 440 KIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAY 499
Query: 462 SHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSM 513
S G ++ + M GV P + Y ++ L R G+ ++ + + M
Sbjct: 500 SRCGSFEQAMTVYRRMLDA-GVTPDLSTYNTVLAALARGGMWEQSEKVLAEM 550
Score = 99.4 bits (246), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 97/503 (19%), Positives = 216/503 (42%), Gaps = 21/503 (4%)
Query: 2 GSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVG 61
G D V++ +++ + + EA+ +M+ +GF P+ + + + A +
Sbjct: 309 GFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEA 368
Query: 62 RVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQ----ERNVVTWNLMM 117
+ + + G V L+ F + G +ESA +FE+M+ + N+ T+N +
Sbjct: 369 MELKNQMAEKGT-KPDVFTYTTLLSGFER-AGKVESAMSIFEEMRNAGCKPNICTFNAFI 426
Query: 118 TRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLA 177
+ G + + +F + + G +PD T + L + + S + + R+G
Sbjct: 427 KMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV 486
Query: 178 LDLCVGCSLVDMYAKC-AVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMR 236
+ +L+ Y++C + + ++ RR+ ++ ++ ++ ++A RG G +++ +
Sbjct: 487 PERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARG-GMWEQSEK 545
Query: 237 LFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYA 296
+ +M G PN T+ S+L A AN + G L + + + +L+ + +
Sbjct: 546 VLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCS 605
Query: 297 RSGRLECARKCFDLL----FEKSLVSCETIVDVIVRD---LNSDETLNHETEHTTGIGAC 349
+ L A + F L F + + ++V + R ++ L++ E G
Sbjct: 606 KCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKER--GFTPS 663
Query: 350 SFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFN 409
TY L+ + GK E+I ++ G + ++ N +I Y + A ++F+
Sbjct: 664 MATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFS 723
Query: 410 DMGDR----NVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVG 465
+M + +VIT+ + I +A +A+ + M++ G +PN TY +++ +
Sbjct: 724 EMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLN 783
Query: 466 LIDEGWKHFNSMRHCHGVVPRVE 488
DE +R+ P+ E
Sbjct: 784 RKDEAKLFVEDLRNLDPHAPKGE 806
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 115/585 (19%), Positives = 246/585 (42%), Gaps = 52/585 (8%)
Query: 2 GSKRDLVSWCSMMSCFANNSMEHEALVTFLD-MLEHGFYPNEYCFTAALRACSNSLYFSV 60
G K L+++ +++ F + + ++ M G P+ Y + + C
Sbjct: 238 GCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQE 297
Query: 61 GRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERN----------V 110
VF + G+ V+ L+D++ K +HR E M+ N +
Sbjct: 298 AAQVFEEMKAAGFSYDKVTYNA-LLDVYGK-------SHRPKEAMKVLNEMVLNGFSPSI 349
Query: 111 VTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSW 170
VT+N +++ +A+ G +++++L +M G PD FT T+ L+ + +
Sbjct: 350 VTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEE 409
Query: 171 VIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMP----EHNVVSWTALIAGYVR 226
+ +G ++C + + MY G + ++F+ + ++V+W L+A + +
Sbjct: 410 MRNAGCKPNICTFNAFIKMYGN---RGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQ 466
Query: 227 GSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNC 286
+G + E +F +M + P TF++++ A + F ++ + + G++
Sbjct: 467 -NGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLS 525
Query: 287 VANSLINMYARSGRLECARKCFDLLFEKSLVSCE-TIVDVIVRDLNSDET-LNHETEHTT 344
N+++ AR G E + K + + E T ++ N E L H
Sbjct: 526 TYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEV 585
Query: 345 GIGACSFTYACLLSGAACIGT----IGKGEQIHALVVKSGFETNLSINNALISMYSKCGN 400
G A LL + + + + E+ + + + GF +++ N+++S+Y +
Sbjct: 586 YSGVIE-PRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQM 644
Query: 401 KEAALQVFNDMGDR----NVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIA 456
A V + M +R ++ T+ S++ ++ K+ E+ E+L G+KP+ ++Y
Sbjct: 645 VAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNT 704
Query: 457 VLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSM--- 513
V+ A + + + F+ MR+ G+VP V Y + + EAI + M
Sbjct: 705 VIYAYCRNTRMRDASRIFSEMRNS-GIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKH 763
Query: 514 PLDADAMVWRSLL-GSCRVHGNTELGEHAAKMILER----EPHDP 553
+ + S++ G C+++ E AK+ +E +PH P
Sbjct: 764 GCRPNQNTYNSIVDGYCKLNRKDE-----AKLFVEDLRNLDPHAP 803
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 117/252 (46%), Gaps = 16/252 (6%)
Query: 290 SLINMYARSGRLECARKCFDLLFE----KSLVSCETIVDVIVR---DLNSDETLNHETEH 342
SLI+ +A SGR A F + E +L++ I++V + N +L E
Sbjct: 213 SLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSL-VEKMK 271
Query: 343 TTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKE 402
+ GI ++TY L++ + Q+ + +GF + NAL+ +Y K +
Sbjct: 272 SDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPK 331
Query: 403 AALQVFNDM----GDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVL 458
A++V N+M +++T+ S+IS +A+ G +A+EL +M E G KP+ TY +L
Sbjct: 332 EAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLL 391
Query: 459 SACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEF---INSMPL 515
S G ++ F MR+ G P + + + + G G +E ++ IN L
Sbjct: 392 SGFERAGKVESAMSIFEEMRNA-GCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGL 450
Query: 516 DADAMVWRSLLG 527
D + W +LL
Sbjct: 451 SPDIVTWNTLLA 462
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
Query: 391 LISMYSKCGNKEAALQVFNDMGDR----NVITWTSIISGFAKHGYATKALELFYEMLETG 446
+ISM K G +A +FN + + +V ++TS+IS FA G +A+ +F +M E G
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 447 VKPNDVTYIAVLSACSHVGLIDEGWKHFNSM---RHCHGVVPRVEHYACMVDVLGRSGLL 503
KP +TY +L+ +G W S+ G+ P Y ++ R L
Sbjct: 239 CKPTLITYNVILNVFGKMGT---PWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLH 295
Query: 504 SEAIEFINSMP---LDADAMVWRSLLGSCRVHGNTELGEHAAK----MILEREPHDPATY 556
EA + M D + + +LL V+G + + A K M+L TY
Sbjct: 296 QEAAQVFEEMKAAGFSYDKVTYNALLD---VYGKSHRPKEAMKVLNEMVLNGFSPSIVTY 352
Query: 557 ILLSNLYATEERWYDVAAIRKTMKQK 582
L + YA + + ++ M +K
Sbjct: 353 NSLISAYARDGMLDEAMELKNQMAEK 378
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 6/169 (3%)
Query: 354 ACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGD 413
A ++S G + + + + GF ++ +LIS ++ G A+ VF M +
Sbjct: 177 AIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEE 236
Query: 414 ----RNVITWTSIISGFAKHGYA-TKALELFYEMLETGVKPNDVTYIAVLSACSHVGLID 468
+IT+ I++ F K G K L +M G+ P+ TY +++ C L
Sbjct: 237 DGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQ 296
Query: 469 EGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDA 517
E + F M+ +V Y ++DV G+S EA++ +N M L+
Sbjct: 297 EAAQVFEEMKAAGFSYDKVT-YNALLDVYGKSHRPKEAMKVLNEMVLNG 344
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 139/296 (46%), Gaps = 13/296 (4%)
Query: 166 QLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYV 225
+L +++S + + L+ M+ C G L +R++F+ MP + SW + G +
Sbjct: 109 ELQVHIMKSSIRPTITFINRLLLMHVSC---GRLDITRQMFDRMPHRDFHSWAIVFLGCI 165
Query: 226 RGSGQEQEAMRLFCDMLQ----GNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGL 281
G ++A LF ML+ G + VLKACA + DF G+Q+H+ KLG
Sbjct: 166 E-MGDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGF 224
Query: 282 --SAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHE 339
+ ++ SLI Y LE A L + V+ V R+ E +
Sbjct: 225 IDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDF 284
Query: 340 TEHTT-GIGACSFTYACLLSGAACIGTIGK-GEQIHALVVKSGFETNLSINNALISMYSK 397
E GI ++ +L + + G+ G+Q+HA +K GFE++ I LI MY K
Sbjct: 285 IEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGK 344
Query: 398 CGNKEAALQVFNDMGDRNVIT-WTSIISGFAKHGYATKALELFYEMLETGVKPNDV 452
G + A +VF D ++ W ++++ + ++G +A++L Y+M TG+K +D
Sbjct: 345 YGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQMKATGIKAHDT 400
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 117/237 (49%), Gaps = 15/237 (6%)
Query: 92 CGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRML----LSGYTPDRFT 147
CG ++ ++F++M R+ +W ++ +MG ED+ LF ML + +
Sbjct: 136 CGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWI 195
Query: 148 LTSALTACAELELLSVGKQLHSWVIRSGL--ALDLCVGCSLVDMYA--KCAVDGSLVDSR 203
L L ACA + +GKQ+H+ + G D + SL+ Y +C D +L
Sbjct: 196 LGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANL---- 251
Query: 204 RVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANL 263
V + + N V+W A + R G+ QE +R F +M + N FS+VLKAC+ +
Sbjct: 252 -VLHQLSNANTVAWAAKVTNDYR-EGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWV 309
Query: 264 PDFG-FGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSC 319
D G G+Q+H+ IKLG + + LI MY + G+++ A K F +++ VSC
Sbjct: 310 SDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSC 366
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 90/221 (40%), Gaps = 11/221 (4%)
Query: 253 FSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLF 312
+S + K A D +L +K + N L+ M+ GRL+ R+ FD +
Sbjct: 91 YSCLAKESARENDQRGAHELQVHIMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRMP 150
Query: 313 EKSL-------VSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGT 365
+ + C + D L H + I S+ C+L A I
Sbjct: 151 HRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIP--SWILGCVLKACAMIRD 208
Query: 366 IGKGEQIHALVVKSGF--ETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVITWTSII 423
G+Q+HAL K GF E + ++ +LI Y + E A V + + + N + W + +
Sbjct: 209 FELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKV 268
Query: 424 SGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHV 464
+ + G + + F EM G+K N + VL ACS V
Sbjct: 269 TNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWV 309
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 4/140 (2%)
Query: 3 SKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACS-NSLYFSVG 61
S + V+W + ++ E + F++M HG N F+ L+ACS S G
Sbjct: 257 SNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSG 316
Query: 62 RVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQ-ERNVVTWNLMMTRF 120
+ V + +K G F+S + C LI+M+ K G ++ A +VF+ + E +V WN M+ +
Sbjct: 317 QQVHANAIKLG-FESDCLIRCRLIEMYGK-YGKVKDAEKVFKSSKDETSVSCWNAMVASY 374
Query: 121 AQMGYPEDSIDLFFRMLLSG 140
Q G ++I L ++M +G
Sbjct: 375 MQNGIYIEAIKLLYQMKATG 394
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 116/530 (21%), Positives = 217/530 (40%), Gaps = 59/530 (11%)
Query: 1 MGSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSV 60
+G +L ++ +++CF S AL M++ G+ P+ + L + S
Sbjct: 110 LGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISD 169
Query: 61 GRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRF 120
+ G +++ GY + + T+N ++
Sbjct: 170 AVSLVGQMVEMGY---------------------------------QPDSFTFNTLIHGL 196
Query: 121 AQMGYPEDSIDLFFRMLLSGYTPDRFT---LTSALTACAELEL-LSVGKQLHSWVIRSGL 176
+ +++ L RM++ G PD T + + L +++L LS+ K++ I G+
Sbjct: 197 FRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGV 256
Query: 177 ALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH----NVVSWTALIAGYVRGSGQEQ 232
+ +++D A C ++ D+ +F M NVV++ +LI G+
Sbjct: 257 V----IYNTIID--ALCNYK-NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC-NYGRWS 308
Query: 233 EAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLI 292
+A RL DM++ + PN TFS+++ A E+L+ + IK + +SLI
Sbjct: 309 DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 368
Query: 293 NMYARSGRLECARKCFDLLFEK----SLVSCETIVDVIVRDLNSDETLNHETEHTT-GIG 347
N + RL+ A+ F+L+ K ++V+ T++ + DE + E + G+
Sbjct: 369 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLV 428
Query: 348 ACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQV 407
+ TY L+ G + + +V G ++ + L+ G E AL V
Sbjct: 429 GNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVV 488
Query: 408 FNDMG----DRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSH 463
F + + ++ T+ +I G K G +LF + GVKPN VTY ++S
Sbjct: 489 FEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 548
Query: 464 VGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSM 513
GL +E F M+ G +P Y ++ R G + + E I M
Sbjct: 549 KGLKEEADALFREMKE-EGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 112/513 (21%), Positives = 211/513 (41%), Gaps = 84/513 (16%)
Query: 1 MGSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSV 60
+G + D+V+ S+++ F + + +A+ M+E G+ P+ + F N+L +
Sbjct: 145 LGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTF--------NTLIHGL 196
Query: 61 GRVVFGSVLKTGYFDSHVSVGCELID-MFVKGC-----------------GDIESAHRVF 102
R + S L+D M VKGC GDI+ A +
Sbjct: 197 FR------------HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244
Query: 103 EKMQ----ERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAEL 158
+KM+ E VV +N ++ D+++LF M G P+ T S +
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 304
Query: 159 ELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH----NV 214
S +L S +I + ++ +L+D + K +G LV++ ++++ M + ++
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVK---EGKLVEAEKLYDEMIKRSIDPDI 361
Query: 215 VSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHS 274
++++LI G+ + EA +F M+ + PN T+++++K G +L
Sbjct: 362 FTYSSLINGFCM-HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 275 QTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDE 334
+ + GL +LI+ + ++ + A+ F K +VS + D++
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVF-----KQMVSDGVLPDIM-------- 467
Query: 335 TLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISM 394
TY+ LL G G + + + +S E ++ N +I
Sbjct: 468 -----------------TYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEG 510
Query: 395 YSKCGNKEAALQVFNDMGDR----NVITWTSIISGFAKHGYATKALELFYEMLETGVKPN 450
K G E +F + + NV+T+T+++SGF + G +A LF EM E G P+
Sbjct: 511 MCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPD 570
Query: 451 DVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGV 483
TY ++ A G + MR C V
Sbjct: 571 SGTYNTLIRAHLRDGDKAASAELIREMRSCRFV 603
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 156/366 (42%), Gaps = 14/366 (3%)
Query: 233 EAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLI 292
+A+ LF DM++ P+ FS +L A A + F L Q LG+S + LI
Sbjct: 64 DAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILI 123
Query: 293 NMYARSGRLECA----RKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHT-TGIG 347
N + R +L A K L +E +V+ ++++ + ++ + G
Sbjct: 124 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQ 183
Query: 348 ACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQV 407
SFT+ L+ G + + +V G + +L +++ K G+ + AL +
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSL 243
Query: 408 FNDMG----DRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSH 463
M + V+ + +II + AL LF EM G++PN VTY +++ +
Sbjct: 244 LKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 303
Query: 464 VGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSM---PLDADAM 520
G + + + M + P V ++ ++D + G L EA + + M +D D
Sbjct: 304 YGRWSDASRLLSDMIE-RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 362
Query: 521 VWRSLLGSCRVHGNTELGEHAAKMILEREPH-DPATYILLSNLYATEERWYDVAAIRKTM 579
+ SL+ +H + +H ++++ ++ + TY L + +R + + + M
Sbjct: 363 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM 422
Query: 580 KQKKII 585
Q+ ++
Sbjct: 423 SQRGLV 428
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 109/493 (22%), Positives = 208/493 (42%), Gaps = 24/493 (4%)
Query: 36 HGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDI 95
HG Y R SL ++ G ++K GY S V++ L++ + G I
Sbjct: 118 HGLYTYNILINCFCRRSQISLALAL----LGKMMKLGYEPSIVTLS-SLLNGYCHG-KRI 171
Query: 96 ESAHRVFEKMQER----NVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSA 151
A + ++M E + +T+ ++ +++ L RM+ G P+ T
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231
Query: 152 LTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCA-VDGSLVDSRRVFNSMP 210
+ + + L + + + + D+ + +++D K VD +L + +
Sbjct: 232 VNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 291
Query: 211 EHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGE 270
NVV++++LI+ G+ +A +L DM++ + PN TF++++ A F E
Sbjct: 292 RPNVVTYSSLISCLC-SYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 350
Query: 271 QLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEK----SLVSCETIVDVI 326
+L+ IK + NSL+N + RL+ A++ F+ + K +V+ T++
Sbjct: 351 KLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGF 410
Query: 327 VRDLNSDE--TLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETN 384
+ ++ L E H +G + TY L+ G G +++ +V G +
Sbjct: 411 CKSKRVEDGTELFREMSHRGLVGD-TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 469
Query: 385 LSINNALISMYSKCGNKEAALQVFNDMGDR----NVITWTSIISGFAKHGYATKALELFY 440
+ + L+ G E AL+VF+ M ++ +T++I G K G +LF
Sbjct: 470 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 529
Query: 441 EMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRS 500
+ GVKPN VTY ++S L+ E + M+ G +P Y ++ R
Sbjct: 530 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE-DGPLPNSGTYNTLIRAHLRD 588
Query: 501 GLLSEAIEFINSM 513
G + + E I M
Sbjct: 589 GDKAASAELIREM 601
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 102/498 (20%), Positives = 203/498 (40%), Gaps = 54/498 (10%)
Query: 1 MGSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSV 60
+G + +V+ S+++ + + +A+ M+E G+ P+ FT + S
Sbjct: 149 LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 208
Query: 61 GRVVFGSVLKTGYFDSHVSVGCELIDMFVKGC---GDIESAHRVFEKMQ----ERNVVTW 113
+ +++ G + V+ G + V G GD + A + KM+ E +VV +
Sbjct: 209 AVALVDRMVQRGCQPNLVTYG-----VVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIF 263
Query: 114 NLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIR 173
N ++ + + +D+++LF M G P+ T +S ++ S QL S +I
Sbjct: 264 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 323
Query: 174 SGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH----NVVSWTALIAGYVRGSG 229
+ +L +L+D + K +G V++ ++++ M + ++ ++ +L+ G+
Sbjct: 324 KKINPNLVTFNALIDAFVK---EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCM-HD 379
Query: 230 QEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVAN 289
+ +A ++F M+ + P+ T+++++K G +L + GL
Sbjct: 380 RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 439
Query: 290 SLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGAC 349
+LI G + A+K F K +VS G+
Sbjct: 440 TLIQGLFHDGDCDNAQKVF-----KQMVS-------------------------DGVPPD 469
Query: 350 SFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFN 409
TY+ LL G G + K ++ + KS + ++ I +I K G + +F
Sbjct: 470 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 529
Query: 410 DMGDR----NVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVG 465
+ + NV+T+ ++ISG +A L +M E G PN TY ++ A G
Sbjct: 530 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDG 589
Query: 466 LIDEGWKHFNSMRHCHGV 483
+ MR C V
Sbjct: 590 DKAASAELIREMRSCRFV 607
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 134/308 (43%), Gaps = 33/308 (10%)
Query: 365 TIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMG----DRNVITWT 420
I GE++ L + G T N LI+ + + AL + M + +++T +
Sbjct: 104 VISLGEKMQRLEIVHGLYTY----NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLS 159
Query: 421 SIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVL-------SACSHVGLIDEGWKH 473
S+++G+ + A+ L +M+E G +P+ +T+ ++ A V L+D +
Sbjct: 160 SLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ- 218
Query: 474 FNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSM---PLDADAMVWRSLLGS-C 529
R C P + Y +V+ L + G A+ +N M ++AD +++ +++ S C
Sbjct: 219 ----RGCQ---PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLC 271
Query: 530 RVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKIIKEAG 589
+ + +M + + TY L + + RW D + + M +KKI
Sbjct: 272 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI----N 327
Query: 590 YSWIEVENQVHKFHVGDTSHPQAQKIYDELDELASKIKKLGYVPNTD-FVLHDVEDEQKE 648
+ + + F V + +A+K+YD++ + + Y + F +HD D+ K+
Sbjct: 328 PNLVTFNALIDAF-VKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQ 386
Query: 649 QYLFQHSE 656
+ F S+
Sbjct: 387 MFEFMVSK 394
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 191/424 (45%), Gaps = 24/424 (5%)
Query: 72 GYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVV----TWNLMMTRFAQMGYPE 127
G S +++ C ++++ V+ G IE A VF++M R VV ++ LM+ + G +
Sbjct: 177 GLTPSSITMNC-VLEIAVE-LGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQ 234
Query: 128 DSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLV 187
++ M+ G+ PD T T LTA E L++ +I G +L SL+
Sbjct: 235 EADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLI 294
Query: 188 DMYAKCAVDGSLVDSRRVFNSMPEH----NVVSWTALIAGYVRGSGQEQEAMRLFCDMLQ 243
D K GS+ + + M + NV + TALI G + G ++A RLF +++
Sbjct: 295 DGLCK---KGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCK-RGWTEKAFRLFLKLVR 350
Query: 244 GNV-APNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLE 302
+ PN T++S++ E L S+ + GL +LIN + ++G
Sbjct: 351 SDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFG 410
Query: 303 CARKCFDLL----FEKSLVSCETIVDVIVRDLNSDETLNH-ETEHTTGIGACSFTYACLL 357
A + +L+ F ++ + +D + + + E + G+ A TY L+
Sbjct: 411 RAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILI 470
Query: 358 SGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNVI 417
I + + K+GFE ++ +NN LI+ + + + + ++F + +I
Sbjct: 471 QEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLI 530
Query: 418 ----TWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKH 473
T+TS+IS + K G AL+ F+ M G P+ TY +++S ++DE K
Sbjct: 531 PTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKL 590
Query: 474 FNSM 477
+ +M
Sbjct: 591 YEAM 594
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 100/473 (21%), Positives = 192/473 (40%), Gaps = 32/473 (6%)
Query: 13 MMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRA-CSNSLYFSVGRVV--FGSVL 69
++ CF + ++ EA M++ GF P+ T L A C N L V R + F ++
Sbjct: 224 VIGCFRDGKIQ-EADRWLTGMIQRGFIPDNATCTLILTALCENGL---VNRAIWYFRKMI 279
Query: 70 KTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQER----NVVTWNLMMTRFAQMGY 125
G+ + ++ LID K G I+ A + E+M NV T ++ + G+
Sbjct: 280 DLGFKPNLINFT-SLIDGLCKK-GSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGW 337
Query: 126 PEDSIDLFFRMLLSG-YTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGC 184
E + LF +++ S Y P+ T TS + + + L+ + L S + GL ++
Sbjct: 338 TEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYT 397
Query: 185 SLVDMYAKCAVDGSLVDSRRVFNSMPEH----NVVSWTALIAGYVRGSGQEQEAMRLFCD 240
+L++ + K GS + + N M + N+ ++ A I + S + EA L
Sbjct: 398 TLINGHCKA---GSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKS-RAPEAYELLNK 453
Query: 241 MLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGR 300
+ +G T++ +++ D + K G A + N LI + R +
Sbjct: 454 AFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKK 513
Query: 301 LECARKCFDLLFEKSLVSCE----TIVDVIVRDLNSDETLNHETEHTTGIGAC---SFTY 353
++ + + F L+ L+ + +++ ++ + D L + H C SFTY
Sbjct: 514 MKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYF--HNMKRHGCVPDSFTY 571
Query: 354 ACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGD 413
L+SG + + +++ ++ G L Y K + A+ + +
Sbjct: 572 GSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDK 631
Query: 414 RNVI-TWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVG 465
+ I T +++ A F ++LE + VT A +ACS G
Sbjct: 632 KLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESG 684
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 91/448 (20%), Positives = 171/448 (38%), Gaps = 88/448 (19%)
Query: 93 GDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSAL 152
G+++ AH V M+ F+++G +++ + M G TP T+ L
Sbjct: 141 GNLQKAHEVMR-----------CMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVL 189
Query: 153 TACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH 212
EL L+ + +++ + +V G + DS
Sbjct: 190 EIAVELGLIEYAE----------------------NVFDEMSVRGVVPDSS--------- 218
Query: 213 NVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQL 272
S+ ++ G R G+ QEA R M+Q P+ T + +L A
Sbjct: 219 ---SYKLMVIGCFR-DGKIQEADRWLTGMIQRGFIPDNATCTLILTALCE---------- 264
Query: 273 HSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNS 332
N + N I + RK DL F+ +L++ +++D + + +
Sbjct: 265 ------------NGLVNRAIWYF---------RKMIDLGFKPNLINFTSLIDGLCKKGSI 303
Query: 333 DETLNHETEHT-TGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSG-FETNLSINNA 390
+ E G +T+ L+ G G K ++ +V+S ++ N+ +
Sbjct: 304 KQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTS 363
Query: 391 LISMYSKCGNKEAALQVFNDMGDR----NVITWTSIISGFAKHGYATKALELFYEMLETG 446
+I Y K A +F+ M ++ NV T+T++I+G K G +A EL M + G
Sbjct: 364 MIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEG 423
Query: 447 VKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEA 506
PN TY A + + E ++ N C G+ Y ++ + +++A
Sbjct: 424 FMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSC-GLEADGVTYTILIQEQCKQNDINQA 482
Query: 507 IEF---INSMPLDADAMVWRSLLGS-CR 530
+ F +N +AD + L+ + CR
Sbjct: 483 LAFFCRMNKTGFEADMRLNNILIAAFCR 510
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/478 (21%), Positives = 193/478 (40%), Gaps = 87/478 (18%)
Query: 1 MGSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAAL-RACSNSLYFS 59
M + DLV+ ++++ EALV M+E+GF P+E + L R C +
Sbjct: 169 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKS----- 223
Query: 60 VGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERN----VVTWNL 115
G+ A +F KM+ERN VV +++
Sbjct: 224 ---------------------------------GNSALALDLFRKMEERNIKASVVQYSI 250
Query: 116 MMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSG 175
++ + G +D++ LF M + G D T +S + G ++ +I
Sbjct: 251 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 310
Query: 176 LALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNV----VSWTALIAGYVRGSGQE 231
+ D+ +L+D++ K +G L++++ ++N M + +++ +LI G+ + +
Sbjct: 311 IIPDVVTFSALIDVFVK---EGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCL- 366
Query: 232 QEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSL 291
EA ++F M+ P+ T+S ++ + G +L + GL N+L
Sbjct: 367 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 426
Query: 292 INMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSF 351
+ + +SG+L A++ F + + G+
Sbjct: 427 VLGFCQSGKLNAAKELFQEMVSR------------------------------GVPPSVV 456
Query: 352 TYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDM 411
TY LL G G + K +I + KS + I N +I + A +F +
Sbjct: 457 TYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSL 516
Query: 412 GDR----NVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVG 465
D+ +V+T+ +I G K G ++A LF +M E G P+D TY ++ A H+G
Sbjct: 517 SDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRA--HLG 572
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 109/506 (21%), Positives = 205/506 (40%), Gaps = 67/506 (13%)
Query: 31 LDMLEHGFYP-----NEYC------FTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHVS 79
L+ +EH Y N YC F ++ + L + + F +++ + VS
Sbjct: 98 LNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVS 157
Query: 80 VGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLS 139
L+D R+ E Q ++VT + ++ G +++ L RM+
Sbjct: 158 EAVALVD-------------RMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEY 204
Query: 140 GYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSL 199
G+ PD T L + ++ L + + + ++D K DGS
Sbjct: 205 GFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK---DGSF 261
Query: 200 VDSRRVFNSMP----EHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSS 255
D+ +FN M + +VV++++LI G G+ + ++ +M+ N+ P+ TFS+
Sbjct: 262 DDALSLFNEMEMKGIKADVVTYSSLIGGLC-NDGKWDDGAKMLREMIGRNIIPDVVTFSA 320
Query: 256 VLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKS 315
++ ++L+++ I G++ NSLI+ + + L A + FDL+ K
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380
Query: 316 LVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHAL 375
CE D++ TY+ L++ + G ++
Sbjct: 381 ---CEP--DIV-------------------------TYSILINSYCKAKRVDDGMRLFRE 410
Query: 376 VVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDR----NVITWTSIISGFAKHGY 431
+ G N N L+ + + G AA ++F +M R +V+T+ ++ G +G
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 470
Query: 432 ATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYA 491
KALE+F +M ++ + Y ++ + +D+ W F S+ GV P V Y
Sbjct: 471 LNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSD-KGVKPDVVTYN 529
Query: 492 CMVDVLGRSGLLSEAIEFINSMPLDA 517
M+ L + G LSEA M D
Sbjct: 530 VMIGGLCKKGSLSEADMLFRKMKEDG 555
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/400 (22%), Positives = 177/400 (44%), Gaps = 37/400 (9%)
Query: 107 ERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQ 166
E ++VT N ++ F D++ L +M+ GY PD T T+ + S
Sbjct: 145 EPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVA 204
Query: 167 LHSWVIRSGLALDLCVGCSLVDMYAKCA-VDGSLVDSRRVFNSMPEHNVVSWTALIAGYV 225
L +++ G DL ++V+ K D +L ++ + E NVV ++ +I
Sbjct: 205 LIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLC 264
Query: 226 RGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVN 285
+ E +A+ LF +M V PN T+SS++ N + +L S I+ ++
Sbjct: 265 KYR-HEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNL 323
Query: 286 CVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTG 345
++LI+ + + G+L A K ++ + ++S+ D +
Sbjct: 324 VTFSALIDAFVKKGKLVKAEKLYEEMIKRSI----------------DPNI--------- 358
Query: 346 IGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAAL 405
FTY+ L++G + +G+ +Q+ L+++ N+ N LI+ + K + +
Sbjct: 359 -----FTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGM 413
Query: 406 QVFNDMGDR----NVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSAC 461
++F +M R N +T+T++I GF + A +F +M+ GV PN +TY +L
Sbjct: 414 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 473
Query: 462 SHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSG 501
G + + F ++ + P + Y M++ + ++G
Sbjct: 474 CKNGKLAKAMVVFEYLQR-STMEPDIYTYNIMIEGMCKAG 512
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 154/366 (42%), Gaps = 14/366 (3%)
Query: 233 EAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDF----GFGEQLHSQTIKLGLSAVNCVA 288
+A+ LF M Q P+ FS +L A A + F FGE++ I L N +
Sbjct: 61 DAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILI 120
Query: 289 NSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVR-DLNSDETLNHETEHTTGIG 347
N S L K L +E +V+ ++++ + SD + G
Sbjct: 121 NCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYK 180
Query: 348 ACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQV 407
+ T+ L+ G + + +V+ G + +L A+++ K G+ + AL +
Sbjct: 181 PDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNL 240
Query: 408 FNDMG----DRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSH 463
N M + NV+ ++++I K+ + AL LF EM GV+PN +TY +++S +
Sbjct: 241 LNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCN 300
Query: 464 VGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSM---PLDADAM 520
G + + + M + P + ++ ++D + G L +A + M +D +
Sbjct: 301 YGRWSDASRLLSDMIE-RKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIF 359
Query: 521 VWRSLL-GSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTM 579
+ SL+ G C + E + MI + + TY L N + +R + + M
Sbjct: 360 TYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREM 419
Query: 580 KQKKII 585
Q+ ++
Sbjct: 420 SQRGLV 425
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/417 (19%), Positives = 166/417 (39%), Gaps = 64/417 (15%)
Query: 1 MGSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSV 60
+G + D+V+ S+++ F + + +A+ M+E G+ P+ FT + L+
Sbjct: 142 LGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGL--FLHNKA 199
Query: 61 GRVVFGSVLKTGYFDSHVSVGCELIDMFVKGC--------GDIESAHRVFEKMQ----ER 108
V D V GC+ D+ G GD + A + KM+ E
Sbjct: 200 SEAV-------ALIDRMVQRGCQ-PDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEA 251
Query: 109 NVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLH 168
NVV ++ ++ + + +D+++LF M G P+ T +S ++ S +L
Sbjct: 252 NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLL 311
Query: 169 SWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGS 228
S +I + +L +L+D + K G LV + +++
Sbjct: 312 SDMIERKINPNLVTFSALIDAFVK---KGKLVKAEKLYE--------------------- 347
Query: 229 GQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVA 288
+M++ ++ PN FT+SS++ L G +Q+ I+
Sbjct: 348 -----------EMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTY 396
Query: 289 NSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIV------RDLNSDETLNHETEH 342
N+LIN + ++ R++ + F + ++ LV ++ RD ++ + + +
Sbjct: 397 NTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV- 455
Query: 343 TTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCG 399
+ G+ TY LL G G + K + + +S E ++ N +I K G
Sbjct: 456 SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 512
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/475 (21%), Positives = 202/475 (42%), Gaps = 29/475 (6%)
Query: 3 SKRDLVSWCSMMSCFANNSMEH--EALVTFLDMLEHGFY---PNEYCFTAALRACSNSLY 57
+ +DL S++S F + ++ V F D+L + + + F + +
Sbjct: 131 ASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGL 190
Query: 58 FSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQER----NVVTW 113
R VF +L G S S L + K C +A VF + E NV ++
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRL-SKDCYKTATAIIVFREFPEVGVCWNVASY 249
Query: 114 NLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIR 173
N+++ Q+G +++ L M L GYTPD + ++ + L +L + R
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 174 SGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNV----VSWTALIAGYVRGSG 229
GL + + S++ + + L ++ F+ M + V +T LI G+ + G
Sbjct: 310 KGLKPNSYIYGSIIGLLCRIC---KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK-RG 365
Query: 230 QEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVAN 289
+ A + F +M ++ P+ T+++++ + D +L + GL +
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 290 SLINMYARSGRLECARKCFDLLFE----KSLVSCETIVDVIVR--DLNSDETLNHETEHT 343
LIN Y ++G ++ A + + + + ++V+ T++D + + DL+S L HE
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM-WK 484
Query: 344 TGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEA 403
G+ FTY +++G G I + ++ +G + L+ Y K G +
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 404 ALQVFNDMGDR----NVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTY 454
A ++ +M + ++T+ +++GF HG +L ML G+ PN T+
Sbjct: 545 AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 599
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 156/376 (41%), Gaps = 42/376 (11%)
Query: 213 NVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQL 272
+V+S++ ++ GY R G+ + +L M + + PN + + S++ + E+
Sbjct: 280 DVISYSTVVNGYCR-FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 273 HSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNS 332
S+ I+ G+ V +LI+ + + G + A K F ++ RD+
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFF--------------YEMHSRDITP 384
Query: 333 DETLNHETEHTTGIGACSFTYACLLSGAACIG-TIGKGEQIHALVVKSGFETNLSINNAL 391
D TY ++SG IG + G+ H + K G E + L
Sbjct: 385 D----------------VLTYTAIISGFCQIGDMVEAGKLFHEMFCK-GLEPDSVTFTEL 427
Query: 392 ISMYSKCGNKEAALQVFNDM----GDRNVITWTSIISGFAKHGYATKALELFYEMLETGV 447
I+ Y K G+ + A +V N M NV+T+T++I G K G A EL +EM + G+
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 448 KPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAI 507
+PN TY ++++ G I+E K G+ Y ++D +SG + +A
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEF-EAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 508 EFINSM---PLDADAMVWRSLLGSCRVHGNTELGEHAAKMILERE-PHDPATYILLSNLY 563
E + M L + + L+ +HG E GE +L + + T+ L Y
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 564 ATEERWYDVAAIRKTM 579
AI K M
Sbjct: 607 CIRNNLKAATAIYKDM 622
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 106/459 (23%), Positives = 177/459 (38%), Gaps = 83/459 (18%)
Query: 33 MLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGC 92
M G PN Y + + + + F +++ G V V LID F K
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV-VYTTLIDGFCKR- 364
Query: 93 GDIESAHRVFEKMQERN----VVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTL 148
GDI +A + F +M R+ V+T+ +++ F Q+G ++ LF M G PD T
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 149 TSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNS 208
T L++ Y K G + D+ RV N
Sbjct: 425 T-----------------------------------ELINGYCKA---GHMKDAFRVHNH 446
Query: 209 MPE----HNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLP 264
M + NVV++T LI G + G A L +M + + PN FT++S++
Sbjct: 447 MIQAGCSPNVVTYTTLIDGLCK-EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG 505
Query: 265 DFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVD 324
+ +L + GL+A +L++ Y +SG ++ A++ + K L TIV
Sbjct: 506 NIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQP--TIV- 562
Query: 325 VIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETN 384
T+ L++G G + GE++ ++ G N
Sbjct: 563 ---------------------------TFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Query: 385 LSINNALISMYSKCGNKEAALQVFNDMGDRNV----ITWTSIISGFAKHGYATKALELFY 440
+ N+L+ Y N +AA ++ DM R V T+ +++ G K +A LF
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQ 655
Query: 441 EMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRH 479
EM G + TY ++ E + F+ MR
Sbjct: 656 EMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRR 694
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/475 (21%), Positives = 202/475 (42%), Gaps = 29/475 (6%)
Query: 3 SKRDLVSWCSMMSCFANNSMEH--EALVTFLDMLEHGFY---PNEYCFTAALRACSNSLY 57
+ +DL S++S F + ++ V F D+L + + + F + +
Sbjct: 131 ASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGL 190
Query: 58 FSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQER----NVVTW 113
R VF +L G S S L + K C +A VF + E NV ++
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRL-SKDCYKTATAIIVFREFPEVGVCWNVASY 249
Query: 114 NLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIR 173
N+++ Q+G +++ L M L GYTPD + ++ + L +L + R
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 174 SGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNV----VSWTALIAGYVRGSG 229
GL + + S++ + + L ++ F+ M + V +T LI G+ + G
Sbjct: 310 KGLKPNSYIYGSIIGLLCRIC---KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK-RG 365
Query: 230 QEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVAN 289
+ A + F +M ++ P+ T+++++ + D +L + GL +
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 290 SLINMYARSGRLECARKCFDLLFE----KSLVSCETIVDVIVR--DLNSDETLNHETEHT 343
LIN Y ++G ++ A + + + + ++V+ T++D + + DL+S L HE
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM-WK 484
Query: 344 TGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEA 403
G+ FTY +++G G I + ++ +G + L+ Y K G +
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 404 ALQVFNDMGDR----NVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTY 454
A ++ +M + ++T+ +++GF HG +L ML G+ PN T+
Sbjct: 545 AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 599
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 156/376 (41%), Gaps = 42/376 (11%)
Query: 213 NVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQL 272
+V+S++ ++ GY R G+ + +L M + + PN + + S++ + E+
Sbjct: 280 DVISYSTVVNGYCR-FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 273 HSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNS 332
S+ I+ G+ V +LI+ + + G + A K F ++ RD+
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFF--------------YEMHSRDITP 384
Query: 333 DETLNHETEHTTGIGACSFTYACLLSGAACIG-TIGKGEQIHALVVKSGFETNLSINNAL 391
D TY ++SG IG + G+ H + K G E + L
Sbjct: 385 D----------------VLTYTAIISGFCQIGDMVEAGKLFHEMFCK-GLEPDSVTFTEL 427
Query: 392 ISMYSKCGNKEAALQVFNDM----GDRNVITWTSIISGFAKHGYATKALELFYEMLETGV 447
I+ Y K G+ + A +V N M NV+T+T++I G K G A EL +EM + G+
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 448 KPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAI 507
+PN TY ++++ G I+E K G+ Y ++D +SG + +A
Sbjct: 488 QPNIFTYNSIVNGLCKSGNIEEAVKLVGEF-EAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 508 EFINSM---PLDADAMVWRSLLGSCRVHGNTELGEHAAKMILERE-PHDPATYILLSNLY 563
E + M L + + L+ +HG E GE +L + + T+ L Y
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 564 ATEERWYDVAAIRKTM 579
AI K M
Sbjct: 607 CIRNNLKAATAIYKDM 622
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 106/459 (23%), Positives = 177/459 (38%), Gaps = 83/459 (18%)
Query: 33 MLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGC 92
M G PN Y + + + + F +++ G V V LID F K
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV-VYTTLIDGFCKR- 364
Query: 93 GDIESAHRVFEKMQERN----VVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTL 148
GDI +A + F +M R+ V+T+ +++ F Q+G ++ LF M G PD T
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 149 TSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNS 208
T L++ Y K G + D+ RV N
Sbjct: 425 T-----------------------------------ELINGYCKA---GHMKDAFRVHNH 446
Query: 209 MPE----HNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLP 264
M + NVV++T LI G + G A L +M + + PN FT++S++
Sbjct: 447 MIQAGCSPNVVTYTTLIDGLCK-EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG 505
Query: 265 DFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVD 324
+ +L + GL+A +L++ Y +SG ++ A++ + K L TIV
Sbjct: 506 NIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQP--TIV- 562
Query: 325 VIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETN 384
T+ L++G G + GE++ ++ G N
Sbjct: 563 ---------------------------TFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Query: 385 LSINNALISMYSKCGNKEAALQVFNDMGDRNV----ITWTSIISGFAKHGYATKALELFY 440
+ N+L+ Y N +AA ++ DM R V T+ +++ G K +A LF
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQ 655
Query: 441 EMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRH 479
EM G + TY ++ E + F+ MR
Sbjct: 656 EMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRR 694
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 124/533 (23%), Positives = 220/533 (41%), Gaps = 31/533 (5%)
Query: 2 GSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVG 61
G + + + S++ A + A VT+ M GF + + A + Y
Sbjct: 155 GFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAA 214
Query: 62 RVVFGSVLKTGY-FDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQER-----NVVTWNL 115
+ +LK G+ DSH+ G L+ F +G ++ A +VF+ M + N V++++
Sbjct: 215 EMFMSKILKIGFVLDSHI--GTSLLLGFCRGL-NLRDALKVFDVMSKEVTCAPNSVSYSI 271
Query: 116 MMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSG 175
++ ++G E++ L +M G P T T + A + L+ L +I G
Sbjct: 272 LIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRG 331
Query: 176 LALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH----NVVSWTALIAGYVRGSGQE 231
++ L+D + DG + ++ V M + +V+++ ALI GY + G+
Sbjct: 332 CKPNVHTYTVLIDGLCR---DGKIEEANGVCRKMVKDRIFPSVITYNALINGYCK-DGRV 387
Query: 232 QEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSL 291
A L M + PN TF+ +++ + L + + GLS N L
Sbjct: 388 VPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVL 447
Query: 292 INMYARSGRLECARK------CFDLLFEKSLVSCETIVDVIVRDLNSD-ETLNHETEHTT 344
I+ R G + A K CFD+ E ++ I++ + +D +
Sbjct: 448 IDGLCREGHMNTAYKLLSSMNCFDI--EPDCLTFTAIINAFCKQGKADVASAFLGLMLRK 505
Query: 345 GIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSK-CGNKE- 402
GI T L+ G +G I +VK T N ++ M SK C KE
Sbjct: 506 GISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEE 565
Query: 403 -AALQVFNDMG-DRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSA 460
A L N +G +V+T+T+++ G + G T + + M +G PN Y +++
Sbjct: 566 LAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIING 625
Query: 461 CSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSM 513
G ++E K ++M+ GV P Y MV +G L A+E + +M
Sbjct: 626 LCQFGRVEEAEKLLSAMQD-SGVSPNHVTYTVMVKGYVNNGKLDRALETVRAM 677
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 119/290 (41%), Gaps = 24/290 (8%)
Query: 284 VNCVANS-----LINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNS----DE 334
V C NS LI+ GRLE A D + EK V+++ L D+
Sbjct: 260 VTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDK 319
Query: 335 TLNHETEHTT-GIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALIS 393
N E G TY L+ G G I + + +VK ++ NALI+
Sbjct: 320 AFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALIN 379
Query: 394 MYSKCGNKEAALQVFNDMGDR----NVITWTSIISGFAKHGYATKALELFYEMLETGVKP 449
Y K G A ++ M R NV T+ ++ G + G KA+ L ML+ G+ P
Sbjct: 380 GYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSP 439
Query: 450 NDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEF 509
+ V+Y ++ G ++ +K +SM +C + P + +++ + G A F
Sbjct: 440 DIVSYNVLIDGLCREGHMNTAYKLLSSM-NCFDIEPDCLTFTAIINAFCKQGKADVASAF 498
Query: 510 INSM---PLDADAMVWRSLL-GSCRVHGNTE----LGEHAAKMILEREPH 551
+ M + D + +L+ G C+V G T + E KM + PH
Sbjct: 499 LGLMLRKGISLDEVTGTTLIDGVCKV-GKTRDALFILETLVKMRILTTPH 547
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 106/497 (21%), Positives = 197/497 (39%), Gaps = 80/497 (16%)
Query: 31 LDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCELIDMFVK 90
L+ + H Y R C +SV G V+K GY + + +F++
Sbjct: 116 LNGIAHNIYTLNIMINCFCRCCKTCFAYSV----LGKVMKLGYEPDTTTFNTLIKGLFLE 171
Query: 91 GCGDIESAHRVFEKMQER----NVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRF 146
G + A + ++M E +VVT+N ++ + G ++DL +M D F
Sbjct: 172 G--KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVF 229
Query: 147 TLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVF 206
T +S +I S L D C+ + + ++ + G
Sbjct: 230 T--------------------YSTIIDS-LCRDGCIDAA-ISLFKEMETKG--------- 258
Query: 207 NSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDF 266
+ +VV++ +L+ G + +G+ + L DM+ + PN TF+ +L
Sbjct: 259 ---IKSSVVTYNSLVRGLCK-AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKL 314
Query: 267 GFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVI 326
+L+ + I G+S N+L++ Y RL A DL+
Sbjct: 315 QEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM--------------- 359
Query: 327 VRDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLS 386
VR+ S + + T+ L+ G + + G ++ + K G N
Sbjct: 360 VRNKCSPDIV---------------TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV 404
Query: 387 INNALISMYSKCGNKEAALQVFNDMGDR----NVITWTSIISGFAKHGYATKALELFYEM 442
+ L+ + + G + A ++F +M +V+T+ ++ G +G KALE+F ++
Sbjct: 405 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464
Query: 443 LETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGL 502
++ + V Y ++ G +++ W F S+ C GV P V Y M+ L + G
Sbjct: 465 QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL-PCKGVKPNVMTYTVMISGLCKKGS 523
Query: 503 LSEAIEFINSMPLDADA 519
LSEA + M D +A
Sbjct: 524 LSEANILLRKMEEDGNA 540
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/471 (22%), Positives = 204/471 (43%), Gaps = 22/471 (4%)
Query: 109 NVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLH 168
++VT N ++ F +++ L +M+ GY PD T T+ + + S L
Sbjct: 134 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV 193
Query: 169 SWVIRSGLALDLCV-GCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRG 227
++ G DL G + + + D +L ++ E +VV ++ +I +
Sbjct: 194 ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKY 253
Query: 228 SGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCV 287
+A+ LF +M + P+ FT+SS++ N + +L S ++ ++
Sbjct: 254 R-HVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVT 312
Query: 288 ANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIG 347
NSLI+ +A+ G+L A K FD + ++S+ + ++ + L+ + T +
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMV 372
Query: 348 ACS-----FTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMY---SKCG 399
+ TY L++G + G ++ + + G N LI + S C
Sbjct: 373 SKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCD 432
Query: 400 NKEAAL-QVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVL 458
N + Q+ +D N++T+ +++ G K+G KA+ +F + ++ ++P+ TY +
Sbjct: 433 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMS 492
Query: 459 SACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDA- 517
G +++GW F S+ GV P V Y M+ + GL EA M D
Sbjct: 493 EGMCKAGKVEDGWDLFCSL-SLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGP 551
Query: 518 --DAMVWRSLLGSCRVHGNTELGEHAAKMILE----REPHDPATYILLSNL 562
D+ + +L+ R H +A++I E R D +TY L++++
Sbjct: 552 LPDSGTYNTLI---RAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDM 599
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 106/493 (21%), Positives = 205/493 (41%), Gaps = 48/493 (9%)
Query: 1 MGSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSV 60
+G +V+ S+++ F + + EA+ M+E G+ P+ FT + S
Sbjct: 129 LGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASE 188
Query: 61 GRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQ----ERNVVTWNLM 116
+ ++ G V+ G + + +G D+ A + KM+ E +VV ++ +
Sbjct: 189 AVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL--ALNLLNKMEKGKIEADVVIYSTV 246
Query: 117 MTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGL 176
+ + + +D+++LF M G PD FT +S ++ S +L S ++ +
Sbjct: 247 IDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKI 306
Query: 177 ALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH----NVVSWTALIAGYVRGSGQEQ 232
++ SL+D +AK +G L+++ ++F+ M + N+V++ +LI G+ +
Sbjct: 307 NPNVVTFNSLIDAFAK---EGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCM-HDRLD 362
Query: 233 EAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLI 292
EA ++F M+ + P+ T+++++ G +L + GL +LI
Sbjct: 363 EAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLI 422
Query: 293 NMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFT 352
+ + ++ + A+ F K +VS G+ T
Sbjct: 423 HGFFQASDCDNAQMVF-----KQMVS-------------------------DGVHPNIMT 452
Query: 353 YACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMG 412
Y LL G G + K + + KS E ++ N + K G E +F +
Sbjct: 453 YNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLS 512
Query: 413 DR----NVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLID 468
+ +VI + ++ISGF K G +A LF +M E G P+ TY ++ A G
Sbjct: 513 LKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKA 572
Query: 469 EGWKHFNSMRHCH 481
+ MR C
Sbjct: 573 ASAELIKEMRSCR 585
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 103/494 (20%), Positives = 197/494 (39%), Gaps = 41/494 (8%)
Query: 233 EAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDF----GFGEQLHSQTIKLGLSAVNCVA 288
EA+ LF +M++ P+ FS +L A A + F FGE++ + L N +
Sbjct: 48 EAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMI 107
Query: 289 NSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHT-TGIG 347
N L S L K L + S+V+ ++++ E + + G
Sbjct: 108 NCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 167
Query: 348 ACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQV 407
+ T+ L+ G + + +V G + +L A+I+ K G + AL +
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 227
Query: 408 FNDMG----DRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSH 463
N M + +V+ ++++I K+ + AL LF EM G++P+ TY +++S +
Sbjct: 228 LNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 287
Query: 464 VGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSM---PLDADAM 520
G + + + M + P V + ++D + G L EA + + M +D + +
Sbjct: 288 YGRWSDASRLLSDMLE-RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV 346
Query: 521 VWRSLLGSCRVHGNTELGEHAAKMILERE-PHDPATYILLSNLYATEERWYDVAAIRKTM 579
+ SL+ +H + + +++ ++ D TY L N + ++ D + + M
Sbjct: 347 TYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM 406
Query: 580 KQKKIIKEA--------GY---SWIEVENQVHKFHVGDTSHPQAQKIYDELDELASKIKK 628
++ ++ G+ S + V K V D HP LD L K
Sbjct: 407 SRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC----K 462
Query: 629 LGYVPNTDFVLHDVEDEQKEQYLFQH---SEKIAVA---------FALISIPNPKPIRIF 676
G + V ++ + E ++ + SE + A F +S+ KP I
Sbjct: 463 NGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIA 522
Query: 677 KNLRVCGDCHTAIK 690
N + G C +K
Sbjct: 523 YNTMISGFCKKGLK 536
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 178/400 (44%), Gaps = 21/400 (5%)
Query: 95 IESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTA 154
+E R+ + + V + +++ + G E S L + G P+ +T + + A
Sbjct: 209 LEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINA 268
Query: 155 CAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNV 214
+ S + + + + G+ + L+++ K +G + D+ ++F+ M E +
Sbjct: 269 YVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVK---NGKMSDAEKLFDEMRERGI 325
Query: 215 VS----WTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGE 270
S +T+LI+ R G + A LF ++ + ++P+ +T+ +++ + + G E
Sbjct: 326 ESDVHVYTSLISWNCR-KGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAE 384
Query: 271 QLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLL----FEKSLVSCETIVDVI 326
L ++ G++ V N+LI+ Y R G ++ A +D++ F+ + +C TI
Sbjct: 385 ILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCF 444
Query: 327 VRDLNSDET---LNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFET 383
R DE L E G+ + +Y L+ G + + +++ + G +
Sbjct: 445 NRLKRYDEAKQWLFRMMEG--GVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQP 502
Query: 384 NLSINNALISMYSKCGNKEAALQVFNDMG----DRNVITWTSIISGFAKHGYATKALELF 439
N N +I Y K G + A ++ +M D + T+TS+I G +A+ LF
Sbjct: 503 NAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLF 562
Query: 440 YEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRH 479
EM G+ N VTY ++S S G DE + ++ M+
Sbjct: 563 SEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKR 602
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 111/525 (21%), Positives = 210/525 (40%), Gaps = 82/525 (15%)
Query: 6 DLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVF 65
++ S+ ++ CF + +L TF + + GF P+ F L S +F
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 66 GSVLKTGY------FDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTR 119
G +++TG+ FD V +G + V+T+N ++
Sbjct: 200 GYMVETGFLEAVALFDQMVEIGLTPV------------------------VITFNTLING 235
Query: 120 FAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALD 179
G ++ L +M+ G D T + + ++ L S + + + D
Sbjct: 236 LCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPD 295
Query: 180 LCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH----NVVSWTALIAGYVRGSGQEQEAM 235
+ + +++D K DG D++ +F+ M E NV ++ +I G+ G+ +A
Sbjct: 296 VVIYSAIIDRLCK---DGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFC-SFGRWSDAQ 351
Query: 236 RLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMY 295
RL DM++ + P+ TF++++ A E+L + + + NS+I +
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
Query: 296 ARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTT-GIGACSFTYA 354
+ R + A+ FDL+ +V+ TI+DV R DE + E + G+ A + TY
Sbjct: 412 CKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYN 471
Query: 355 CLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNK--EAALQVFN--- 409
L+ G + + + + ++ G + N L +Y C N+ E AL++F
Sbjct: 472 TLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL--LYGFCENEKLEEALELFEVIQ 529
Query: 410 ------DMGDRNVI------------------------------TWTSIISGFAKHGYAT 433
D N+I T+ +ISGF +
Sbjct: 530 MSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAIS 589
Query: 434 KALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMR 478
A LF++M + G +P++ TY ++ C G ID+ + + MR
Sbjct: 590 DANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMR 634
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/383 (19%), Positives = 153/383 (39%), Gaps = 33/383 (8%)
Query: 198 SLVDSRRVFNSM----PEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTF 253
SL D+ F+ M P + V +I +VR + A+ L+ M + N ++F
Sbjct: 86 SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVR-MNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 254 SSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFE 313
+ ++K + F + KLG N+L++ R+ A F + E
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 314 KSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIH 373
+ + D +V G+ T+ L++G G + + +
Sbjct: 205 TGFLEAVALFDQMVE---------------IGLTPVVITFNTLINGLCLEGRVLEAAALV 249
Query: 374 ALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDR----NVITWTSIISGFAKH 429
+V G ++ +++ K G+ ++AL + + M + +V+ +++II K
Sbjct: 250 NKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKD 309
Query: 430 GYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEH 489
G+ + A LF EMLE G+ PN TY ++ G + + M + P V
Sbjct: 310 GHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE-REINPDVLT 368
Query: 490 YACMVDVLGRSGLLSEAIEFINSMP---LDADAMVWRSLL-GSCRVHGNTELGEHAAKMI 545
+ ++ + G L EA + + M + D + + S++ G C+ H + +H ++
Sbjct: 369 FNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK-HNRFDDAKHMFDLM 427
Query: 546 LEREPHDPATYILLSNLYATEER 568
D T+ + ++Y +R
Sbjct: 428 ---ASPDVVTFNTIIDVYCRAKR 447
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 106/480 (22%), Positives = 202/480 (42%), Gaps = 67/480 (13%)
Query: 1 MGSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSV 60
+G + D+V+ S+++ + ++ +A+ M+E G+ P+ + FT + L+
Sbjct: 147 LGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF--LHNKA 204
Query: 61 GRVVFGSVLKTGYFDSHVSVGCELIDMFVKGC--------GDIESAHRVFEKMQ----ER 108
V D V GC+ D+ G GDI+ A + KM+ +
Sbjct: 205 SEAV-------ALVDQMVQRGCQ-PDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKA 256
Query: 109 NVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLH 168
NVV +N ++ + + E ++DLF M G P+ T S + S +L
Sbjct: 257 NVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLL 316
Query: 169 SWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNV----VSWTALIAGY 224
S ++ + ++ +L+D + K +G LV++ ++ M + ++ +++ LI G+
Sbjct: 317 SNMLEKKINPNVVTFNALIDAFFK---EGKLVEAEKLHEEMIQRSIDPDTITYNLLINGF 373
Query: 225 VRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKA---CANLPDFGFGEQLHSQTIKLGL 281
+ EA ++F M+ + PN T+++++ C + D G +L + + GL
Sbjct: 374 CM-HNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVED---GVELFREMSQRGL 429
Query: 282 SAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETE 341
++I + ++G + A+ F K +VS D++
Sbjct: 430 VGNTVTYTTIIQGFFQAGDCDSAQMVF-----KQMVSNRVPTDIM--------------- 469
Query: 342 HTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNK 401
TY+ LL G G + I + KS E N+ I N +I K G
Sbjct: 470 ----------TYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKV 519
Query: 402 EAALQVFNDMGDR-NVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSA 460
A +F + + +V+T+ ++ISG +A +LF +M E G PN TY ++ A
Sbjct: 520 GEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA 579
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 158/366 (43%), Gaps = 14/366 (3%)
Query: 233 EAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLI 292
+A+ LF DM++ P+ F+ +L A A + F L Q LG+S + I
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 293 NMYARSGRLECA----RKCFDLLFEKSLVSCETIVDVIVRDLN-SDETLNHETEHTTGIG 347
N + R +L A K L +E +V+ ++++ SD + G
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185
Query: 348 ACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQV 407
+FT+ L+ G + + +V+ G + +L +++ K G+ + AL +
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNL 245
Query: 408 FNDMG----DRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSH 463
N M NV+ + +II K+ + A++LF EM G++PN VTY ++++ +
Sbjct: 246 LNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCN 305
Query: 464 VGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSM---PLDADAM 520
G + + ++M + P V + ++D + G L EA + M +D D +
Sbjct: 306 YGRWSDASRLLSNMLE-KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTI 364
Query: 521 VWRSLLGSCRVHGNTELGEHAAKMILERE-PHDPATYILLSNLYATEERWYDVAAIRKTM 579
+ L+ +H + + K ++ ++ + TY L N + +R D + + M
Sbjct: 365 TYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREM 424
Query: 580 KQKKII 585
Q+ ++
Sbjct: 425 SQRGLV 430
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 115/538 (21%), Positives = 220/538 (40%), Gaps = 56/538 (10%)
Query: 25 EALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFGSVLKTGYFDSHVSVGCEL 84
+A+ F DM++ +P+ F L A + F + + G ++T +
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFEL-VISLGEQMQTLGISHDLYTYSIF 124
Query: 85 IDMFVKGCGDIESAHRVFEKMQ----ERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSG 140
I+ F + + A V KM E ++VT + ++ + D++ L +M+ G
Sbjct: 125 INCFCRR-SQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 141 YTPDRFTLTS----------ALTACA----------ELELLSVGKQLHSWVIRSG--LAL 178
Y PD FT T+ A A A + +L++ G ++ R LAL
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 179 DLCVGCSLVDMYAKCAVDGSLVDS----RRV------FNSMPEH----NVVSWTALIAGY 224
+L + A + +++DS R V F M NVV++ +LI
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLI-NC 302
Query: 225 VRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAV 284
+ G+ +A RL +ML+ + PN TF++++ A E+LH + I+ +
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 285 NCVANSLINMYARSGRLECARKCFDLLFEK----SLVSCETIVDVIVRDLNSDETLNHET 340
N LIN + RL+ A++ F + K ++ + T+++ + ++ +
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFR 422
Query: 341 EHTT-GIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCG 399
E + G+ + TY ++ G G + + +V + T++ + L+ G
Sbjct: 423 EMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYG 482
Query: 400 NKEAALQVFNDMG----DRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYI 455
+ AL +F + + N+ + ++I G K G +A +LF + +KP+ VTY
Sbjct: 483 KLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYN 539
Query: 456 AVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSM 513
++S L+ E F M+ G +P Y ++ R + + E I M
Sbjct: 540 TMISGLCSKRLLQEADDLFRKMKE-DGTLPNSGTYNTLIRANLRDCDRAASAELIKEM 596
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 90/440 (20%), Positives = 189/440 (42%), Gaps = 24/440 (5%)
Query: 109 NVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLH 168
++V +N +++ A+M E I L +M G + D +T + + LS+ +
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 169 SWVIRSGLALDLCVGCSLVDMY--AKCAVDG-SLVDSRRVFNSMPEHNVVSWTALIAGYV 225
+ +++ G D+ SL++ Y +K D +LVD P+ ++T LI G
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPD--TFTFTTLIHGLF 199
Query: 226 RGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVN 285
+ EA+ L M+Q P+ T+ +V+ D L ++ + A
Sbjct: 200 L-HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANV 258
Query: 286 CVANSLINMYARSGRLECARKCFDLLFEK----SLVSCETIVDVIV---RDLNSDETLNH 338
+ N++I+ + +E A F + K ++V+ ++++ + R ++ L++
Sbjct: 259 VIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSN 318
Query: 339 ETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKC 398
E I T+ L+ G + + E++H +++ + + N LI+ +
Sbjct: 319 MLEKK--INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMH 376
Query: 399 GNKEAALQVFNDMGDR----NVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTY 454
+ A Q+F M + N+ T+ ++I+GF K +ELF EM + G+ N VTY
Sbjct: 377 NRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTY 436
Query: 455 IAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAI---EFIN 511
++ G D F M + V + Y+ ++ L G L A+ +++
Sbjct: 437 TTIIQGFFQAGDCDSAQMVFKQMVS-NRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQ 495
Query: 512 SMPLDADAMVWRSLL-GSCR 530
++ + ++ +++ G C+
Sbjct: 496 KSEMELNIFIYNTMIEGMCK 515
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 96.3 bits (238), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 104/475 (21%), Positives = 201/475 (42%), Gaps = 66/475 (13%)
Query: 84 LIDMFVKGCGDIESAHRVFEKMQERNVVTW-----NLMMTRFAQMGYPEDSIDLFFRMLL 138
LI++ V G SA VF + E V + +M + +G+ D+I F R+
Sbjct: 140 LIELVVSRKGK-NSASSVFISLVEMRVTPMCGFLVDALMITYTDLGFIPDAIQCF-RL-- 195
Query: 139 SGYTPDRFTLTSALTACAEL--ELLSVGKQLHSW-----VIRSGLALDLCVGCSLVDMYA 191
RF + + C L ++ + W ++ +G L++ V L++ +
Sbjct: 196 --SRKHRFDV--PIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFC 251
Query: 192 KCAVDGSLVDSRRVFNSMPEHN----VVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVA 247
K +G++ D+++VF+ + + + VVS+ LI GY + G E RL M +
Sbjct: 252 K---EGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCK-VGNLDEGFRLKHQMEKSRTR 307
Query: 248 PNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKC 307
P+ FT+S+++ A L + K GL + + +LI+ ++R+G ++ ++
Sbjct: 308 PDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKES 367
Query: 308 FDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIG 367
+ + K L D+++ Y L++G G +
Sbjct: 368 YQKMLSKGLQP-----DIVL-------------------------YNTLVNGFCKNGDLV 397
Query: 368 KGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRNV----ITWTSII 423
I +++ G + LI + + G+ E AL++ +M + + +++++
Sbjct: 398 AARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALV 457
Query: 424 SGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGV 483
G K G A EML G+KP+DVTY ++ A G G+K M+ G
Sbjct: 458 CGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQ-SDGH 516
Query: 484 VPRVEHYACMVDVLGRSGLLSEAIEFINSM---PLDADAMVWRSLLGSCRVHGNT 535
VP V Y +++ L + G + A +++M + D + + +LL H N+
Sbjct: 517 VPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANS 571
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 113/230 (49%), Gaps = 16/230 (6%)
Query: 376 VVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDRN----VITWTSIISGFAKHGY 431
++ +GF N+ + N L++ + K GN A +VF+++ R+ V+++ ++I+G+ K G
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGN 290
Query: 432 ATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHC-HGVVPRVEHY 490
+ L ++M ++ +P+ TY A+++A +D F+ M C G++P +
Sbjct: 291 LDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEM--CKRGLIPNDVIF 348
Query: 491 ACMVDVLGRSG---LLSEAIEFINSMPLDADAMVWRSLL-GSCRVHGNTELGEHAAKMIL 546
++ R+G L+ E+ + + S L D +++ +L+ G C+ +G+ + ++
Sbjct: 349 TTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCK-NGDLVAARNIVDGMI 407
Query: 547 ER--EPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKI-IKEAGYSWI 593
R P D TY L + + IRK M Q I + G+S +
Sbjct: 408 RRGLRP-DKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSAL 456
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 94/436 (21%), Positives = 189/436 (43%), Gaps = 47/436 (10%)
Query: 107 ERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQ 166
E ++VT + ++ + D++ L +M+ GY PD T T+ + S
Sbjct: 152 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 211
Query: 167 LHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMP----EHNVVSWTALIA 222
L +++ G +L +V+ K G + + + N M E NVV ++ +I
Sbjct: 212 LVDRMVQRGCQPNLVTYGVVVNGLCK---RGDIDLAFNLLNKMEAAKIEANVVIYSTVID 268
Query: 223 GYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLS 282
+ E +A+ LF +M V PN T+SS++ N + +L S I+ ++
Sbjct: 269 SLCKYR-HEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN 327
Query: 283 AVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEH 342
N+LI+ + + G+L A K +D ++I R ++ D
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYD--------------EMIKRSIDPD--------- 364
Query: 343 TTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKE 402
FTY+ L++G + + + + L++ N+ N LI+ + K +
Sbjct: 365 -------IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRID 417
Query: 403 AALQVFNDMGDR----NVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVL 458
+++F +M R N +T+T++I GF + A +F +M+ GV PN +TY +L
Sbjct: 418 EGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLL 477
Query: 459 SACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDA- 517
G +++ F ++ + P + Y M++ + ++G + + + S+ L
Sbjct: 478 DGLCKNGKLEKAMVVFEYLQRSK-MEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 536
Query: 518 --DAMVWRSLL-GSCR 530
D +++ +++ G CR
Sbjct: 537 KPDVIIYNTMISGFCR 552
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 105/494 (21%), Positives = 202/494 (40%), Gaps = 41/494 (8%)
Query: 233 EAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLI 292
+A+ LF M++ P+ F F+ +L A A + F L + +LG+S N LI
Sbjct: 68 DAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILI 127
Query: 293 NMYARSGRLECAR----KCFDLLFEKSLVSCETIVDVIVRDLN-SDETLNHETEHTTGIG 347
N + R ++ A K L +E S+V+ ++++ SD + G
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 187
Query: 348 ACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQV 407
+ T+ L+ G + + +V+ G + NL +++ K G+ + A +
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL 247
Query: 408 FNDMG----DRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSH 463
N M + NV+ ++++I K+ + AL LF EM GV+PN +TY +++S +
Sbjct: 248 LNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCN 307
Query: 464 VGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSM---PLDADAM 520
+ + + M + P V + ++D + G L EA + + M +D D
Sbjct: 308 YERWSDASRLLSDMIE-RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 366
Query: 521 VWRSLLGSCRVHGNTELGEHAAKMILEREPH-DPATYILLSNLYATEERWYDVAAIRKTM 579
+ SL+ +H + +H ++++ ++ + TY L N + +R + + + M
Sbjct: 367 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREM 426
Query: 580 KQKKII-KEAGYSWI----------EVENQVHKFHVGDTSHPQAQKIYDELDELASKIKK 628
Q+ ++ Y+ + + V K V D HP LD L K
Sbjct: 427 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC----K 482
Query: 629 LGYVPNTDFVLHDVEDEQKEQYLFQHS---EKIAVA---------FALISIPNPKPIRIF 676
G + V ++ + E ++ ++ E + A F +S+ KP I
Sbjct: 483 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVII 542
Query: 677 KNLRVCGDCHTAIK 690
N + G C +K
Sbjct: 543 YNTMISGFCRKGLK 556
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/465 (20%), Positives = 199/465 (42%), Gaps = 48/465 (10%)
Query: 1 MGSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSV 60
+G + +V+ S+++ + + +A+ M+E G+ P+ FT + S
Sbjct: 149 LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 208
Query: 61 GRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQ----ERNVVTWNLM 116
+ +++ G + V+ G +++ K GDI+ A + KM+ E NVV ++ +
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGV-VVNGLCKR-GDIDLAFNLLNKMEAAKIEANVVIYSTV 266
Query: 117 MTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGL 176
+ + + +D+++LF M G P+ T +S ++ E S +L S +I +
Sbjct: 267 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKI 326
Query: 177 ALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH----NVVSWTALIAGYVRGSGQEQ 232
++ +L+D + K +G LV++ ++++ M + ++ ++++LI G+ +
Sbjct: 327 NPNVVTFNALIDAFVK---EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM-HDRLD 382
Query: 233 EAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLI 292
EA +F M+ + PN T+++++ G +L + + GL +LI
Sbjct: 383 EAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI 442
Query: 293 NMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFT 352
+ + ++ + A+ F K +VS G+ T
Sbjct: 443 HGFFQARDCDNAQMVF-----KQMVS-------------------------DGVHPNIMT 472
Query: 353 YACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMG 412
Y LL G G + K + + +S E + N +I K G E +F +
Sbjct: 473 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLS 532
Query: 413 DR----NVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVT 453
+ +VI + ++ISGF + G +A LF +M E G P+ T
Sbjct: 533 LKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/474 (21%), Positives = 201/474 (42%), Gaps = 35/474 (7%)
Query: 2 GSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVG 61
G D+V++ +++S +++ + EA M GF P Y + + +
Sbjct: 265 GVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERA 324
Query: 62 RVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVT----WNLMM 117
+ VF +L++G + L++ K GD+ +VF M+ R+VV ++ MM
Sbjct: 325 KEVFAEMLRSGLSPDSTTYRSLLMEACKK--GDVVETEKVFSDMRSRDVVPDLVCFSSMM 382
Query: 118 TRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLA 177
+ F + G + ++ F + +G PD T + ++SV L + +++ G A
Sbjct: 383 SLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCA 442
Query: 178 LDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVV----SWTALIAGYVRGSGQEQE 233
+D+ +++ K + G ++ ++FN M E + + T LI G+ + G Q
Sbjct: 443 MDVVTYNTILHGLCKRKMLG---EADKLFNEMTERALFPDSYTLTILIDGHCK-LGNLQN 498
Query: 234 AMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLIN 293
AM LF M + + + T++++L + D +++ + + + + L+N
Sbjct: 499 AMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVN 558
Query: 294 MYARSGRLECARKCFDLLFEKSL----VSCETIVDVIVRDLN-SDETLNHETEHTTGIGA 348
G L A + +D + K++ + C +++ R N SD E + G
Sbjct: 559 ALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVP 618
Query: 349 CSFTYACLLSG-------AACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNK 401
+Y L+ G + G + K E+ +V F N+++ + +
Sbjct: 619 DCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTY-----NSILHGFCRQNQM 673
Query: 402 EAALQVFNDMGDRNV----ITWTSIISGFAKHGYATKALELFYEMLETGVKPND 451
+ A V M +R V T+T +I+GF T+A + EML+ G P+D
Sbjct: 674 KEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 104/567 (18%), Positives = 236/567 (41%), Gaps = 70/567 (12%)
Query: 45 FTAALRACSNSLYFSVGRV--------VFGSVLKTGYFDSHVSVGCELIDMFVKGC---G 93
FT ++ AC N+L S+ R+ V+ + ++G V + +++ V G
Sbjct: 196 FTVSIDAC-NALIGSLVRIGWVELAWGVYQEISRSG-----VGINVYTLNIMVNALCKDG 249
Query: 94 DIESAHRVFEKMQER----NVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLT 149
+E ++QE+ ++VT+N +++ ++ G E++ +L M G++P +T
Sbjct: 250 KMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYN 309
Query: 150 SALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSM 209
+ + + K++ + ++RSGL+ D SL+ + G +V++ +VF+ M
Sbjct: 310 TVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL---MEACKKGDVVETEKVFSDM 366
Query: 210 PEHNVVS----WTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPD 265
+VV ++++++ + R SG +A+ F + + + P+ ++ +++
Sbjct: 367 RSRDVVPDLVCFSSMMSLFTR-SGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGM 425
Query: 266 FGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDV 325
L ++ ++ G + N++++ + L A K F+ + E++L
Sbjct: 426 ISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALF-------- 477
Query: 326 IVRDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNL 385
S+T L+ G +G + ++ + + ++
Sbjct: 478 ----------------------PDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDV 515
Query: 386 SINNALISMYSKCGNKEAALQVFNDMGDRNV----ITWTSIISGFAKHGYATKALELFYE 441
N L+ + K G+ + A +++ DM + + I+++ +++ G+ +A ++ E
Sbjct: 516 VTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDE 575
Query: 442 MLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSG 501
M+ +KP + +++ G +G M G VP Y ++ R
Sbjct: 576 MISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKM-ISEGFVPDCISYNTLIYGFVREE 634
Query: 502 LLSEAIEFINSMP-----LDADAMVWRSLL-GSCRVHGNTELGEHAAKMILEREPHDPAT 555
+S+A + M L D + S+L G CR + E KMI D +T
Sbjct: 635 NMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRST 694
Query: 556 YILLSNLYATEERWYDVAAIRKTMKQK 582
Y + N + +++ + I M Q+
Sbjct: 695 YTCMINGFVSQDNLTEAFRIHDEMLQR 721
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 128/264 (48%), Gaps = 19/264 (7%)
Query: 285 NCVANS-----LINMYARSGRLECARKCFDLL----FEKSLVSCETIVDVIVRDLNSDET 335
NC +N LI Y ++ +L A + F LL F S+ +C ++ +VR +
Sbjct: 160 NCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELA 219
Query: 336 LN-HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISM 394
++ +G+G +T +++ G + K + V + G ++ N LIS
Sbjct: 220 WGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISA 279
Query: 395 YSKCGNKEAALQVFNDMGDRN----VITWTSIISGFAKHGYATKALELFYEMLETGVKPN 450
YS G E A ++ N M + V T+ ++I+G KHG +A E+F EML +G+ P+
Sbjct: 280 YSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 339
Query: 451 DVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFI 510
TY ++L G + E K F+ MR VVP + ++ M+ + RSG L +A+ +
Sbjct: 340 STTYRSLLMEACKKGDVVETEKVFSDMRS-RDVVPDLVCFSSMMSLFTRSGNLDKALMYF 398
Query: 511 NSMP---LDADAMVWRSLL-GSCR 530
NS+ L D +++ L+ G CR
Sbjct: 399 NSVKEAGLIPDNVIYTILIQGYCR 422
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 128/598 (21%), Positives = 249/598 (41%), Gaps = 89/598 (14%)
Query: 1 MGSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSV 60
+G D V+ +M EAL +E G P+ ++ A++AC +L ++
Sbjct: 227 IGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAM 286
Query: 61 GR---------------------VVFGSVLKTGYFDSHVSVGCEL----IDMFVKGC--- 92
V+ SV K G D + + E+ I M V
Sbjct: 287 ANSLLREMKEKKLCVPSQETYTSVILASV-KQGNMDDAIRLKDEMLSDGISMNVVAATSL 345
Query: 93 -------GDIESAHRVFEKMQER----NVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGY 141
D+ SA +F+KM++ N VT+++++ F + G E +++ + +M + G
Sbjct: 346 ITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGL 405
Query: 142 TPDRFTLTSALTACAE-------LELLS-----------VGKQLHSWVIRSGL---ALDL 180
TP F + + + + L+L V + SW+ + G A +L
Sbjct: 406 TPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATEL 465
Query: 181 C-------VGCSLVD----MYAKCAVDGSLVDSRRVFNSMPEH----NVVSWTALIAGYV 225
+G ++V M C ++ +R VF+++ E N +++ LI G
Sbjct: 466 LSKMESRGIGPNVVSYNNVMLGHCR-QKNMDLARIVFSNILEKGLKPNNYTYSILIDGCF 524
Query: 226 RGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVN 285
R EQ A+ + M N+ NG + +++ + +L + I+ V+
Sbjct: 525 RNH-DEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVS 583
Query: 286 CVA-NSLINMYARSGRLECARKCFDLL----FEKSLVSCETIVDVIVRDLNSDETLNHET 340
C++ NS+I+ + + G ++ A ++ + ++++ ++++ + ++ D+ L
Sbjct: 584 CMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRD 643
Query: 341 E-HTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCG 399
E G+ Y L+ G + + + +++ G + I N+LIS + G
Sbjct: 644 EMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLG 703
Query: 400 NKEAALQVFNDM---GDR-NVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYI 455
N AAL ++ M G R ++ T+T++I G K G A EL+ EM G+ P+++ Y
Sbjct: 704 NMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYT 763
Query: 456 AVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSM 513
+++ S G + K F M+ + V P V Y ++ R G L EA + M
Sbjct: 764 VIVNGLSKKGQFVKVVKMFEEMKK-NNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEM 820
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 97/485 (20%), Positives = 205/485 (42%), Gaps = 41/485 (8%)
Query: 2 GSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVG 61
G + V++ ++ F N +AL + M G P+ + ++
Sbjct: 369 GPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEA 428
Query: 62 RVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQER----NVVTWNLMM 117
+F +TG + V C I ++ G + A + KM+ R NVV++N +M
Sbjct: 429 LKLFDESFETGLANVFV---CNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVM 485
Query: 118 TRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTAC----AELELLSVGKQLHSWVIR 173
+ + + +F +L G P+ +T + + C E L V + S
Sbjct: 486 LGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTS---- 541
Query: 174 SGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH-----NVVSWTALIAGYVRGS 228
S + ++ V ++++ K G +R + +M E + +S+ ++I G+ +
Sbjct: 542 SNIEVNGVVYQTIINGLCKV---GQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFK-E 597
Query: 229 GQEQEAMRLFCDMLQGNVAPNGFTFSSVLKA-CANL---PDFGFGEQLHSQTIKLGLSAV 284
G+ A+ + +M ++PN T++S++ C N +++ ++ +KL + A
Sbjct: 598 GEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAY 657
Query: 285 NCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIV---RDL-NSDETLN-HE 339
+LI+ + + +E A F L E+ L + I + ++ R+L N L+ ++
Sbjct: 658 G----ALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYK 713
Query: 340 TEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCG 399
G+ TY L+ G G + +++ + G + I +++ SK G
Sbjct: 714 KMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKG 773
Query: 400 NKEAALQVFNDMGDRNV----ITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYI 455
+++F +M NV + + ++I+G + G +A L EML+ G+ P+ T+
Sbjct: 774 QFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFD 833
Query: 456 AVLSA 460
++S
Sbjct: 834 ILVSG 838
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 121/537 (22%), Positives = 222/537 (41%), Gaps = 41/537 (7%)
Query: 2 GSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVG 61
G DLV + +M EA TF +LE PN +TA + + S
Sbjct: 324 GIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSA 383
Query: 62 RVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVV----TWNLMM 117
+ +L+ + V+ +I+ +VK G +E A + KM+++NVV T+ ++
Sbjct: 384 EFIITQMLEKSVIPNVVTYS-SMINGYVKK-GMLEEAVSLLRKMEDQNVVPNGFTYGTVI 441
Query: 118 TRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLA 177
+ G E +I+L M L G + + L + + + + K L ++ G+
Sbjct: 442 DGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVT 501
Query: 178 LDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH----NVVSWTALIAGYVR----GSG 229
LD SL+D++ K G + M E +VVS+ LI+G ++ G+
Sbjct: 502 LDQINYTSLIDVFFK---GGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGAD 558
Query: 230 QEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPD----FGFGEQLHSQTIKLGLSAVN 285
+ MR + + P+ TF+ ++ + D +++ S IK L + N
Sbjct: 559 WAYKGMR------EKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCN 612
Query: 286 CVANSLINMYARSGRLECARKCFD--LLFE--KSLVSCETIVDVIVRDLNSDETLN-HET 340
V + M +G++E A + +L E +L + +D + +D HET
Sbjct: 613 IV----VGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHET 668
Query: 341 EHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGN 400
+ GI Y L++ +G K + + GF + N+L+ Y +
Sbjct: 669 LLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSH 728
Query: 401 KEAALQVFNDMGDR----NVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIA 456
AL ++ M + NV T+ +II G + G + + EM G++P+D TY A
Sbjct: 729 VRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNA 788
Query: 457 VLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSM 513
++S + +G + + M G+VP+ Y ++ G + +A E + M
Sbjct: 789 LISGQAKIGNMKGSMTIYCEM-IADGLVPKTSTYNVLISEFANVGKMLQARELLKEM 844
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 103/459 (22%), Positives = 213/459 (46%), Gaps = 20/459 (4%)
Query: 68 VLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPE 127
++K G VS LID F K G+ A + +++ E N++T ++++ + + E
Sbjct: 187 MVKMGILPDTVSYNT-LIDGFCK-VGNFVRAKALVDEISELNLITHTILLSSYYNLHAIE 244
Query: 128 DSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLV 187
++ + M++SG+ PD T +S + + + G L + + + +LV
Sbjct: 245 EA---YRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLV 301
Query: 188 DMYAKCAV--DGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGN 245
D K + + S+ V +P ++V +T L+ G + +G +EA + F +L+ N
Sbjct: 302 DSLFKANIYRHALALYSQMVVRGIPV-DLVVYTVLMDGLFK-AGDLREAEKTFKMLLEDN 359
Query: 246 VAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECAR 305
PN T+++++ D E + +Q ++ + +S+IN Y + G LE A
Sbjct: 360 QVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAV 419
Query: 306 KCFDLLFEKSLV----SCETIVDVIVRDLNSDETLNHETE-HTTGIGACSFTYACLLSGA 360
+ ++++V + T++D + + + + E G+ ++ L++
Sbjct: 420 SLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHL 479
Query: 361 ACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDR----NV 416
IG I + + + +V G + +LI ++ K G++EAAL +M +R +V
Sbjct: 480 KRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDV 539
Query: 417 ITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNS 476
+++ +ISG K G A + M E G++P+ T+ ++++ G + K ++
Sbjct: 540 VSYNVLISGMLKFG-KVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDK 598
Query: 477 MRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPL 515
M+ C G+ P + +V +L +G + EAI +N M L
Sbjct: 599 MKSC-GIKPSLMSCNIVVGMLCENGKMEEAIHILNQMML 636
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 90/435 (20%), Positives = 170/435 (39%), Gaps = 54/435 (12%)
Query: 92 CGDIESAHRVFEKMQERNVVT----WNLMMTRFAQMGYPEDSIDLFF-RMLLSGYTPDRF 146
C + A R M VV WN ++ +F G D + L + +M+ G +PD F
Sbjct: 71 CERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVF 130
Query: 147 TLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVF 206
L + + ++ LS L +
Sbjct: 131 ALNVLIHSFCKVGRLSFAISL-------------------------------------LR 153
Query: 207 NSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDF 266
N + + V++ +I+G G EA + +M++ + P+ ++++++ + +F
Sbjct: 154 NRVISIDTVTYNTVISGLCE-HGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNF 212
Query: 267 GFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVI 326
+ L + +L L + +S N++A E R F+ +V+ +I++ +
Sbjct: 213 VRAKALVDEISELNLITHTILLSSYYNLHAIE---EAYRDMVMSGFDPDVVTFSSIINRL 269
Query: 327 VRDLNSDE--TLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETN 384
+ E L E E + + TY L+ +++ +V G +
Sbjct: 270 CKGGKVLEGGLLLREMEEMS-VYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVD 328
Query: 385 LSINNALISMYSKCGNKEAALQVFN----DMGDRNVITWTSIISGFAKHGYATKALELFY 440
L + L+ K G+ A + F D NV+T+T+++ G K G + A +
Sbjct: 329 LVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIIT 388
Query: 441 EMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRS 500
+MLE V PN VTY ++++ G+++E M VVP Y ++D L ++
Sbjct: 389 QMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMED-QNVVPNGFTYGTVIDGLFKA 447
Query: 501 GLLSEAIEFINSMPL 515
G AIE M L
Sbjct: 448 GKEEMAIELSKEMRL 462
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 106/449 (23%), Positives = 174/449 (38%), Gaps = 108/449 (24%)
Query: 84 LIDMFVKGCGDIESAHRVFEKMQER----NVVTWNLM---MTRFAQMGYPEDSIDLFFR- 135
LID+F KG GD E+A E+MQER +VV++N++ M +F ++G D ++
Sbjct: 510 LIDVFFKG-GDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVG-----ADWAYKG 563
Query: 136 MLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAV 195
M G PD A + + S KQ S I L D C +
Sbjct: 564 MREKGIEPD--------IATFNIMMNSQRKQGDSEGI-----------LKLWDKMKSCGI 604
Query: 196 DGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTF-- 253
SL+ ++ G + +G+ +EA+ + M+ + PN T+
Sbjct: 605 KPSLMSCN----------------IVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRI 648
Query: 254 -----------SSVLKACANLPDFG--FGEQLHSQTI----KLGLSAVNCVA-------- 288
++ K L +G Q+++ I KLG++ +
Sbjct: 649 FLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARG 708
Query: 289 --------NSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHET 340
NSL++ Y + A + ++ E + + I+R L SD L E
Sbjct: 709 FIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGL-SDAGLIKEV 767
Query: 341 EH------TTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISM 394
+ + G+ FTY L+SG A IG + I+ ++ G S N LIS
Sbjct: 768 DKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISE 827
Query: 395 YSKCGNKEAALQVFNDMGDR----NVITWTSIISGF------------AKHGYATKALEL 438
++ G A ++ +MG R N T+ ++ISG K Y +A L
Sbjct: 828 FANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGL 887
Query: 439 FYEML-ETGVKPNDVTYIAVLSACSHVGL 466
EM+ E G P + T + +A S G+
Sbjct: 888 LKEMVEEKGYIPCNQTIYWISAAFSKPGM 916
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 111/525 (21%), Positives = 210/525 (40%), Gaps = 82/525 (15%)
Query: 6 DLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVF 65
++ S+ ++ CF + +L TF + + GF P+ F L S +F
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 66 GSVLKTGY------FDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNVVTWNLMMTR 119
G +++TG+ FD V +G + V+T+N ++
Sbjct: 200 GYMVETGFLEAVALFDQMVEIGLTPV------------------------VITFNTLING 235
Query: 120 FAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALD 179
G ++ L +M+ G D T + + ++ L S + + + D
Sbjct: 236 LCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPD 295
Query: 180 LCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH----NVVSWTALIAGYVRGSGQEQEAM 235
+ + +++D K DG D++ +F+ M E NV ++ +I G+ G+ +A
Sbjct: 296 VVIYSAIIDRLCK---DGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFC-SFGRWSDAQ 351
Query: 236 RLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMY 295
RL DM++ + P+ TF++++ A E+L + + + NS+I +
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
Query: 296 ARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTT-GIGACSFTYA 354
+ R + A+ FDL+ +V+ TI+DV R DE + E + G+ A + TY
Sbjct: 412 CKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYN 471
Query: 355 CLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNK--EAALQVFN--- 409
L+ G + + + + ++ G + N L +Y C N+ E AL++F
Sbjct: 472 TLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL--LYGFCENEKLEEALELFEVIQ 529
Query: 410 ------DMGDRNVI------------------------------TWTSIISGFAKHGYAT 433
D N+I T+ +ISGF +
Sbjct: 530 MSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAIS 589
Query: 434 KALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMR 478
A LF++M + G +P++ TY ++ C G ID+ + + MR
Sbjct: 590 DANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMR 634
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/400 (19%), Positives = 161/400 (40%), Gaps = 33/400 (8%)
Query: 198 SLVDSRRVFNSM----PEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTF 253
SL D+ F+ M P + V +I +VR + A+ L+ M + N ++F
Sbjct: 86 SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVR-MNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 254 SSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFE 313
+ ++K + F + KLG N+L++ R+ A F + E
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 314 KSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIH 373
+ + D +V G+ T+ L++G G + + +
Sbjct: 205 TGFLEAVALFDQMVE---------------IGLTPVVITFNTLINGLCLEGRVLEAAALV 249
Query: 374 ALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDR----NVITWTSIISGFAKH 429
+V G ++ +++ K G+ ++AL + + M + +V+ +++II K
Sbjct: 250 NKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKD 309
Query: 430 GYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEH 489
G+ + A LF EMLE G+ PN TY ++ G + + M + P V
Sbjct: 310 GHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE-REINPDVLT 368
Query: 490 YACMVDVLGRSGLLSEAIEFINSMP---LDADAMVWRSLL-GSCRVHGNTELGEHAAKMI 545
+ ++ + G L EA + + M + D + + S++ G C+ H + +H ++
Sbjct: 369 FNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK-HNRFDDAKHMFDLM 427
Query: 546 LEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQKKII 585
D T+ + ++Y +R + + + + ++ ++
Sbjct: 428 ---ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 464
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 157/349 (44%), Gaps = 18/349 (5%)
Query: 129 SIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVD 188
++ + +M+ GY P T S L + + L +++SG ++ V +L+D
Sbjct: 125 ALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLID 184
Query: 189 MYAKCAVDGSLVDSRRVFNSMPEH----NVVSWTALIAGYVRGSGQEQEAMRLFCDMLQG 244
K +G L + + N M + +VV++ L+ G SG+ +A R+ DM++
Sbjct: 185 GLCK---NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCY-SGRWSDAARMLRDMMKR 240
Query: 245 NVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECA 304
++ P+ TF++++ + ++L+ + I+ + N NS+IN GRL A
Sbjct: 241 SINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDA 300
Query: 305 RKCFDLLFEK----SLVSCETIVDVIVRDLNSDETLN-HETEHTTGIGACSFTYACLLSG 359
+K FDL+ K ++V+ T++ + DE + + G A FTY L+ G
Sbjct: 301 KKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHG 360
Query: 360 AACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVFNDMGDR----N 415
+G + I +V ++ + L+ G E+AL F+DM +
Sbjct: 361 YCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIG 420
Query: 416 VITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTY-IAVLSACSH 463
++ + +I G K KA ELF + GVKP+ TY I +L C +
Sbjct: 421 IVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKN 469
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 135/347 (38%), Gaps = 82/347 (23%)
Query: 232 QEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSL 291
++A LF +M+ P+ F+ +L A ANL + + G+S L
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTIL 112
Query: 292 INMYARSGRLECAR----KCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIG 347
I+ + R RL A K L +E S+V
Sbjct: 113 IHCFCRCSRLSFALSVLGKMMKLGYEPSIV------------------------------ 142
Query: 348 ACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQV 407
T+ LL G + IG + L+VKSG+E N+ + N LI K G AL++
Sbjct: 143 ----TFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALEL 198
Query: 408 FNDMGDR---------------------------------------NVITWTSIISGFAK 428
N+M + +V+T+T++I F K
Sbjct: 199 LNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVK 258
Query: 429 HGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVE 488
G +A EL+ EM+++ V PN+VTY ++++ G + + K F+ M G P V
Sbjct: 259 QGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMAS-KGCFPNVV 317
Query: 489 HYACMVDVLGRSGLLSEAIEFINSMP---LDADAMVWRSLL-GSCRV 531
Y ++ + ++ E ++ M +AD + +L+ G C+V
Sbjct: 318 TYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQV 364
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 103/496 (20%), Positives = 191/496 (38%), Gaps = 91/496 (18%)
Query: 97 SAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACA 156
+A R F +E+ + T L RF ED+ LFF M+ S P T LTA A
Sbjct: 30 AAARAFSDYREK-LRTGFLHSIRF------EDAFALFFEMVHSQPLPSIVDFTRLLTATA 82
Query: 157 ELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCA-VDGSLVDSRRVFNSMPEHNVV 215
L + G++ DL L+ + +C+ + +L ++ E ++V
Sbjct: 83 NLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIV 142
Query: 216 SWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQ 275
++ +L+ G+ + +A L M++ PN +++++ + +L ++
Sbjct: 143 TFGSLLHGFCL-VNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNE 201
Query: 276 TIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLFEKSL----VSCETIVDVIVRDLN 331
K GL A N+L+ SGR A + + ++S+ V+ ++DV V+ N
Sbjct: 202 MEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGN 261
Query: 332 SDETLNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNAL 391
DE ++++ +++S + N N++
Sbjct: 262 LDE----------------------------------AQELYKEMIQSSVDPNNVTYNSI 287
Query: 392 ISMYSKCGNKEAALQVFNDMGDR----NVITWTSIISGFAK------------------- 428
I+ G A + F+ M + NV+T+ ++ISGF K
Sbjct: 288 INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347
Query: 429 -----------HGYAT-----KALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWK 472
HGY AL++F M+ V P+ +T+ +L G I+
Sbjct: 348 NADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALV 407
Query: 473 HFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMPLDA---DAMVWR-SLLGS 528
F+ MR + V Y M+ L ++ + +A E +P++ DA + +LG
Sbjct: 408 KFDDMRESEKYIGIVA-YNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGL 466
Query: 529 CRVHGNTELGEHAAKM 544
C+ E E +M
Sbjct: 467 CKNGPRREADELIRRM 482
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 123/266 (46%), Gaps = 18/266 (6%)
Query: 2 GSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRA--CSNSLYFS 59
G DL S+ ++ CF S AL M++ G+ P+ F + L N + +
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA 160
Query: 60 VGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQER----NVVTWNL 115
V+ ++K+GY + +V V LID K G++ A + +M+++ +VVT+N
Sbjct: 161 FSLVIL--MVKSGY-EPNVVVYNTLIDGLCKN-GELNIALELLNEMEKKGLGADVVTYNT 216
Query: 116 MMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSG 175
++T G D+ + M+ PD T T+ + + L ++L+ +I+S
Sbjct: 217 LLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSS 276
Query: 176 LALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEH----NVVSWTALIAGYVRGSGQE 231
+ + S+++ + G L D+++ F+ M NVV++ LI+G+ +
Sbjct: 277 VDPNNVTYNSIIN---GLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFR-MV 332
Query: 232 QEAMRLFCDMLQGNVAPNGFTFSSVL 257
E M+LF M + FT+++++
Sbjct: 333 DEGMKLFQRMSCEGFNADIFTYNTLI 358
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 123/567 (21%), Positives = 238/567 (41%), Gaps = 93/567 (16%)
Query: 2 GSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVG 61
G RD+VS+ ++ + EAL M++ G PN +TA +R
Sbjct: 272 GMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEA 331
Query: 62 RVVFGSVLKTGY-FDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQER----NVVTWNLM 116
V+F +L G D + V LID + G++ A + M++R +++T+N +
Sbjct: 332 FVLFNRILSVGIEVDEFLYV--TLIDGICRK-GNLNRAFSMLGDMEQRGIQPSILTYNTV 388
Query: 117 MTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGL 176
+ G ++ ++ G D T ++ L + +++ + ++ + + +
Sbjct: 389 INGLCMAGRVSEADEVS-----KGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKI 443
Query: 177 ALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRG---SGQEQE 233
+DL V C++ + + G+ ++ ++ +MPE ++ TA A ++G +GQ +E
Sbjct: 444 PMDL-VMCNI--LLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEE 500
Query: 234 AMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSLIN 293
A+ +F ++ + +V SA C N +I+
Sbjct: 501 ALEMFNELRKSSV-----------------------------------SAAVCY-NRIID 524
Query: 294 MYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTG-IGACSFT 352
+ G L+ A + L+EK L D+++ TL H G G
Sbjct: 525 ALCKKGMLDTATEVLIELWEKGL----------YLDIHTSRTLLHSIHANGGDKGILGLV 574
Query: 353 YAC-LLSGAACIGTIGKGEQIHALVVKSGFETNLSI--------------NNALISMYSK 397
Y L+ C+G + + I L + FE + + + L ++
Sbjct: 575 YGLEQLNSDVCLGML--NDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDN 632
Query: 398 CGNKEAALQVFN----DMGDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVT 453
+ +A L V N + +VI +T II+G K G+ KAL L GV N +T
Sbjct: 633 LRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTIT 692
Query: 454 YIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSM 513
Y ++++ G + E + F+S+ + G+VP Y ++D L + GL +A + ++SM
Sbjct: 693 YNSLINGLCQQGCLVEALRLFDSLENI-GLVPSEVTYGILIDNLCKEGLFLDAEKLLDSM 751
Query: 514 ---PLDADAMVWRSLL-GSCRVHGNTE 536
L + +++ S++ G C++ G TE
Sbjct: 752 VSKGLVPNIIIYNSIVDGYCKL-GQTE 777
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 112/243 (46%), Gaps = 18/243 (7%)
Query: 352 TYACLLSGAACIGTIGKGEQIHALVVK---SGFETNLSINNALISMYSKCGNKEAALQVF 408
TY L+S A C +GK +++ LV + GFE + + I Y K G AL
Sbjct: 209 TYTTLVS-ALC--QLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQD 265
Query: 409 NDM----GDRNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHV 464
+M +R+V++++ +I G +K G +AL L +M++ GV+PN +TY A++ +
Sbjct: 266 REMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKM 325
Query: 465 GLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSMP---LDADAMV 521
G ++E + FN + G+ Y ++D + R G L+ A + M + +
Sbjct: 326 GKLEEAFVLFNRILSV-GIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILT 384
Query: 522 WRSLLGSCRVHGNTELGEHAAKMILEREPHDPATYILLSNLYATEERWYDVAAIRKTMKQ 581
+ +++ + G + +K ++ D TY L + Y + V IR+ +
Sbjct: 385 YNTVINGLCMAGRVSEADEVSKGVV----GDVITYSTLLDSYIKVQNIDAVLEIRRRFLE 440
Query: 582 KKI 584
KI
Sbjct: 441 AKI 443
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/432 (19%), Positives = 165/432 (38%), Gaps = 79/432 (18%)
Query: 109 NVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLH 168
N+VT+ +++ Q+G ++ DL R+ G+ E + + +H
Sbjct: 206 NLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGF---------------EFDCVFYSNWIH 250
Query: 169 SWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGS 228
+ G +LVD +L+ R + +VVS++ LI G +
Sbjct: 251 GYF----------KGGALVD---------ALMQDREMVEKGMNRDVVSYSILIDGLSK-E 290
Query: 229 GQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVA 288
G +EA+ L M++ V PN T++++++ + L ++ + +G+ +
Sbjct: 291 GNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLY 350
Query: 289 NSLINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETEHTTGIGA 348
+LI+ R G L + F +L + GI
Sbjct: 351 VTLIDGICRKGNLN---RAFSMLGDM---------------------------EQRGIQP 380
Query: 349 CSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALISMYSKCGNKEAALQVF 408
TY +++G G + + ++ V G ++ + L+ Y K N +A L++
Sbjct: 381 SILTYNTVINGLCMAGRVSEADE-----VSKGVVGDVITYSTLLDSYIKVQNIDAVLEIR 435
Query: 409 NDMGDRNV----ITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHV 464
+ + + ++ F G +A L+ M E + P+ TY ++
Sbjct: 436 RRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKT 495
Query: 465 GLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSM---PLDADAMV 521
G I+E + FN +R V Y ++D L + G+L A E + + L D
Sbjct: 496 GQIEEALEMFNELRKSS--VSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHT 553
Query: 522 WRSLLGSCRVHG 533
R+LL S +G
Sbjct: 554 SRTLLHSIHANG 565
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 95/447 (21%), Positives = 201/447 (44%), Gaps = 25/447 (5%)
Query: 102 FEKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYT--PDRFTLTSALTACAELE 159
+EK + + +++L++ + + D + L F+M+++ + P+ TL++ L +
Sbjct: 148 YEKCKLSSSSSFDLLIQHYVRSRRVLDGV-LVFKMMITKVSLLPEVRTLSALLHGLVKFR 206
Query: 160 LLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMP----EHNVV 215
+ +L + ++ G+ D+ + ++ + C + L ++ + M + N+V
Sbjct: 207 HFGLAMELFNDMVSVGIRPDVYIYTGVI--RSLCELK-DLSRAKEMIAHMEATGCDVNIV 263
Query: 216 SWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQ 275
+ LI G + + EA+ + D+ ++ P+ T+ +++ + +F G ++ +
Sbjct: 264 PYNVLIDGLCKKQ-KVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDE 322
Query: 276 TIKLGLSAVNCVANSLINMYARSGRLECA----RKCFDLLFEKSLVSCETIVDVIVRDLN 331
+ L S +SL+ + G++E A ++ D +L ++D + +
Sbjct: 323 MLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRK 382
Query: 332 SDET-LNHETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNA 390
E L + G+ TY+ L+ G + +V +G + ++ N+
Sbjct: 383 FHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNS 442
Query: 391 LISMYSKCGNKEAA----LQVFNDMGDRNVITWTSIISGFAKHGYATKALELFYEMLETG 446
LI+ + K G+ AA ++ N + V+T+TS++ G+ G KAL L++EM G
Sbjct: 443 LINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKG 502
Query: 447 VKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEA 506
+ P+ T+ +LS GLI + K FN M + V P Y M++ G +S+A
Sbjct: 503 IAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWN-VKPNRVTYNVMIEGYCEEGDMSKA 561
Query: 507 IEFINSMP---LDADAMVWRSLL-GSC 529
EF+ M + D +R L+ G C
Sbjct: 562 FEFLKEMTEKGIVPDTYSYRPLIHGLC 588
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 107/504 (21%), Positives = 198/504 (39%), Gaps = 110/504 (21%)
Query: 7 LVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVGRVVFG 66
+V++ S+M + + ++AL + +M G P+ Y FT L
Sbjct: 472 VVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLL----------------- 514
Query: 67 SVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQERNV----VTWNLMMTRFAQ 122
+G F + G I A ++F +M E NV VT+N+M+ + +
Sbjct: 515 ----SGLFRA----------------GLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCE 554
Query: 123 MGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLALDLCV 182
G + + M G PD ++ + L G+ + V GL C
Sbjct: 555 EGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHG-----LCLTGQASEAKVFVDGLHKGNC- 608
Query: 183 GCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIAGYVRGSGQEQEAMRLFCDML 242
E N + +T L+ G+ R G+ +EA+ + +M+
Sbjct: 609 ----------------------------ELNEICYTGLLHGFCR-EGKLEEALSVCQEMV 639
Query: 243 QGNVAPNGFTFSSVLKACANLPD----FGFGEQLHSQTIKLGLSAVNCVANSLINMYARS 298
Q V + + ++ D FG +++H + GL + + S+I+ +++
Sbjct: 640 QRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDR----GLKPDDVIYTSMIDAKSKT 695
Query: 299 GRLECARKCFDLLFEKSLVSCETIVDVIVRDL------NSDETLNHETEHTTGIGACSFT 352
G + A +DL+ + V E ++ L N E L + + + + T
Sbjct: 696 GDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSV-PNQVT 754
Query: 353 YACLLSGAACIGTIGKGE-------QIHALVVKSGFETNLSINNALISMYSKCGNKEAAL 405
Y C L + KGE ++H ++K G N + N LI + + G E A
Sbjct: 755 YGCFLD------ILTKGEVDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEAS 807
Query: 406 QVFNDM-GD---RNVITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSAC 461
++ M GD + IT+T++I+ + KA+EL+ M E G++P+ V Y ++ C
Sbjct: 808 ELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGC 867
Query: 462 SHVGLIDEGWKHFNSMRHCHGVVP 485
G + + + N M G++P
Sbjct: 868 CVAGEMGKATELRNEMLR-QGLIP 890
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 121/576 (21%), Positives = 216/576 (37%), Gaps = 100/576 (17%)
Query: 2 GSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVG 61
G +L + +++ HEA + F M + G PN+ ++ +
Sbjct: 362 GVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTA 421
Query: 62 RVVFGSVLKTGY------FDSHVSVGCELIDMFVKGCGDIESAH----RVFEKMQERNVV 111
G ++ TG ++S ++ C+ GDI +A + K E VV
Sbjct: 422 LSFLGEMVDTGLKLSVYPYNSLINGHCKF--------GDISAAEGFMAEMINKKLEPTVV 473
Query: 112 TWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWV 171
T+ +M + G ++ L+ M G P +T T+ L S +
Sbjct: 474 TYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLL----------------SGL 517
Query: 172 IRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNV----VSWTALIAGYVRG 227
R+GL + D+ ++FN M E NV V++ +I GY
Sbjct: 518 FRAGL----------------------IRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCE- 554
Query: 228 SGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKA-CANLPDFGFGEQLHSQTIKLGLSAVNC 286
G +A +M + + P+ +++ ++ C G+ ++ GL NC
Sbjct: 555 EGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLT------GQASEAKVFVDGLHKGNC 608
Query: 287 VANS-----LINMYARSGRLECARKCFDLLFEKSLVSCETIVDVIVRDLNSDETLNHETE 341
N L++ + R G+LE A L + +V +D++ + D +L H+
Sbjct: 609 ELNEICYTGLLHGFCREGKLEEA-----LSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDR 663
Query: 342 ----------HTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNAL 391
H G+ Y ++ + G + I L++ G N A+
Sbjct: 664 KLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAV 723
Query: 392 ISMYSKCGNKEAALQVFNDMGD----RNVITWTSIISGFAKHGY-ATKALELFYEMLETG 446
I+ K G A + + M N +T+ + K KA+EL +L+ G
Sbjct: 724 INGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK-G 782
Query: 447 VKPNDVTYIAVLSACSHVGLIDEGWKHFNSMRHCHGVVPRVEHYACMVDVLGRSGLLSEA 506
+ N TY ++ G I+E + M GV P Y M++ L R + +A
Sbjct: 783 LLANTATYNMLIRGFCRQGRIEEASELITRMIG-DGVSPDCITYTTMINELCRRNDVKKA 841
Query: 507 IEFINSMP---LDADAMVWRSLLGSCRVHGNTELGE 539
IE NSM + D + + +L+ C V G E+G+
Sbjct: 842 IELWNSMTEKGIRPDRVAYNTLIHGCCVAG--EMGK 875
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 91/217 (41%), Gaps = 7/217 (3%)
Query: 2 GSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAALRACSNSLYFSVG 61
G K D V + SM+ + EA + M+ G PNE +TA + + + +
Sbjct: 677 GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEA 736
Query: 62 RVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESA---HRVFEKMQERNVVTWNLMMT 118
V+ + + V+ GC +D+ KG D++ A H K N T+N+++
Sbjct: 737 EVLCSKMQPVSSVPNQVTYGC-FLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIR 795
Query: 119 RFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSGLAL 178
F + G E++ +L RM+ G +PD T T+ + + +L + + G+
Sbjct: 796 GFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRP 855
Query: 179 DLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVV 215
D +L+ C V G + + + N M ++
Sbjct: 856 DRVAYNTLIH---GCCVAGEMGKATELRNEMLRQGLI 889
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 108/457 (23%), Positives = 203/457 (44%), Gaps = 59/457 (12%)
Query: 93 GDIESAHRVFEKMQERNVVTWNLMMTRFAQMGYPEDSIDL----FFRMLLSGYTPDRFTL 148
G I++A +VF++M+ + ++ RF + E +L ++ M G++ FT
Sbjct: 23 GMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTY 82
Query: 149 TSALTACAELELLSVGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNS 208
+ ++ +++ + L S + G D+ +D+ + G V + F
Sbjct: 83 SRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQT---FFC 139
Query: 209 M----PEHNVVSWTALIAGYVRGSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLP 264
M E +VVS+T LI G R +G+ +A+ ++ M++ V+P+ KACA L
Sbjct: 140 MVQRGREPDVVSYTILINGLFR-AGKVTDAVEIWNAMIRSGVSPDN-------KACAALV 191
Query: 265 ---------DFGF---GEQLHSQTIKLGLSAVNCVANSLINMYARSGRLECARKCFDLLF 312
D + E++ S +KL V N+LI+ + ++GR+E A +
Sbjct: 192 VGLCHARKVDLAYEMVAEEIKSARVKLS----TVVYNALISGFCKAGRIEKAEALKSYM- 246
Query: 313 EKSLVSCET--IVDVIVRDLNSDETLNHETEHT------TGIGACSFTYACLLSGAACIG 364
S + CE + ++ + D + E +GI +++Y LL
Sbjct: 247 --SKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHC--- 301
Query: 365 TIGKGEQIHALVVKS----GFETNLSINNALISMYSKCGNKEAALQVFNDMGDR----NV 416
+ ++ + +VK GF +S + LI + + N A ++F +M + NV
Sbjct: 302 RVSHPDKCYNFMVKEMEPRGFCDVVSYST-LIETFCRASNTRKAYRLFEEMRQKGMVMNV 360
Query: 417 ITWTSIISGFAKHGYATKALELFYEMLETGVKPNDVTYIAVLSACSHVGLIDEGWKHFNS 476
+T+TS+I F + G ++ A +L +M E G+ P+ + Y +L G +D+ + FN
Sbjct: 361 VTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFND 420
Query: 477 MRHCHGVVPRVEHYACMVDVLGRSGLLSEAIEFINSM 513
M H + P Y ++ L RSG ++EAI+ M
Sbjct: 421 MIE-HEITPDAISYNSLISGLCRSGRVTEAIKLFEDM 456
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/388 (19%), Positives = 165/388 (42%), Gaps = 51/388 (13%)
Query: 103 EKMQERNVVTWNLMMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLS 162
++ +E +VV++ +++ + G D+++++ M+ SG +PD ACA
Sbjct: 142 QRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDN-------KACA------ 188
Query: 163 VGKQLHSWVIRSGLALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNVVSWTALIA 222
L + LC + Y A + + S RV + + V + ALI+
Sbjct: 189 ------------ALVVGLCHARKVDLAYEMVAEE---IKSARV-----KLSTVVYNALIS 228
Query: 223 GYVR-GSGQEQEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGL 281
G+ + G ++ EA++ + M + P+ T++ +L + E + ++ ++ G+
Sbjct: 229 GFCKAGRIEKAEALKSY--MSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGI 286
Query: 282 SAVNCVANSLINMYARSGRLECARKCFDLLFEK-------SLVSCETIVDVIVRDLNSDE 334
N L+ R R+ KC++ + ++ +VS T+++ R N+ +
Sbjct: 287 QLDAYSYNQLLK---RHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRK 343
Query: 335 TLN-HETEHTTGIGACSFTYACLLSGAACIGTIGKGEQIHALVVKSGFETNLSINNALIS 393
E G+ TY L+ G +++ + + G + ++
Sbjct: 344 AYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILD 403
Query: 394 MYSKCGNKEAALQVFNDMGDRNV----ITWTSIISGFAKHGYATKALELFYEMLETGVKP 449
K GN + A VFNDM + + I++ S+ISG + G T+A++LF +M P
Sbjct: 404 HLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCP 463
Query: 450 NDVTYIAVLSACSHVGLIDEGWKHFNSM 477
+++T+ ++ + +K ++ M
Sbjct: 464 DELTFKFIIGGLIRGKKLSAAYKVWDQM 491
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 125/302 (41%), Gaps = 51/302 (16%)
Query: 1 MGSKRDLVSWCSMMSCFANNSMEHEALVTFLDMLEHGFYPNEYCFTAAL-RACSNSLYFS 59
+G + DLV++ +++ + +N+M A +M+ G + Y + L R C S
Sbjct: 249 IGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDK 308
Query: 60 VGRVVFGSVLKTGYFDSHVSVGCELIDMFVKGCGDIESAHRVFEKMQER----NVVTWNL 115
+ + G+ D V LI+ F + + A+R+FE+M+++ NVVT+
Sbjct: 309 CYNFMVKEMEPRGFCD--VVSYSTLIETFCRA-SNTRKAYRLFEEMRQKGMVMNVVTYTS 365
Query: 116 MMTRFAQMGYPEDSIDLFFRMLLSGYTPDRFTLTSALTACAELELLSVGKQLHSWVIRSG 175
++ F + G SV K+L + G
Sbjct: 366 LIKAFLREGNS-----------------------------------SVAKKLLDQMTELG 390
Query: 176 LALDLCVGCSLVDMYAKCAVDGSLVDSRRVFNSMPEHNV----VSWTALIAGYVRGSGQE 231
L+ D +++D K G++ + VFN M EH + +S+ +LI+G R SG+
Sbjct: 391 LSPDRIFYTTILDHLCK---SGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCR-SGRV 446
Query: 232 QEAMRLFCDMLQGNVAPNGFTFSSVLKACANLPDFGFGEQLHSQTIKLGLSAVNCVANSL 291
EA++LF DM P+ TF ++ ++ Q + G + V+++L
Sbjct: 447 TEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTL 506
Query: 292 IN 293
I
Sbjct: 507 IK 508