Miyakogusa Predicted Gene
- Lj0g3v0302209.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0302209.2 Non Chatacterized Hit- tr|I1LVH5|I1LVH5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.44919
PE,90.83,0,HIS_KIN,Signal transduction histidine kinase, core; ATPase
domain of HSP90 chaperone/DNA topoisomera,CUFF.20689.2
(546 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G66340.1 | Symbols: ETR1, EIN1, ETR, AtETR1 | Signal transduc... 826 0.0
AT2G40940.1 | Symbols: ERS1, ERS | ethylene response sensor 1 | ... 616 e-176
AT3G04580.2 | Symbols: EIN4 | Signal transduction histidine kina... 268 7e-72
AT3G04580.1 | Symbols: EIN4 | Signal transduction histidine kina... 268 7e-72
AT3G23150.1 | Symbols: ETR2 | Signal transduction histidine kina... 263 3e-70
AT1G04310.1 | Symbols: ERS2 | ethylene response sensor 2 | chr1:... 204 2e-52
AT5G10720.1 | Symbols: AHK5, CKI2, HK5 | histidine kinase 5 | ch... 133 3e-31
AT5G35750.1 | Symbols: AHK2, HK2 | histidine kinase 2 | chr5:139... 121 1e-27
AT1G27320.1 | Symbols: AHK3, HK3 | histidine kinase 3 | chr1:948... 120 2e-27
AT2G01830.1 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE dom... 110 2e-24
AT2G01830.3 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE dom... 110 2e-24
AT2G01830.2 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE dom... 110 2e-24
AT2G17820.1 | Symbols: ATHK1, AHK1, HK1 | histidine kinase 1 | c... 108 1e-23
AT2G47430.1 | Symbols: CKI1 | Signal transduction histidine kina... 85 2e-16
AT4G16250.1 | Symbols: PHYD | phytochrome D | chr4:9195602-91994... 50 3e-06
>AT1G66340.1 | Symbols: ETR1, EIN1, ETR, AtETR1 | Signal
transduction histidine kinase, hybrid-type, ethylene
sensor | chr1:24734698-24737366 FORWARD LENGTH=738
Length = 738
Score = 826 bits (2133), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/545 (75%), Positives = 449/545 (82%), Gaps = 4/545 (0%)
Query: 1 MLVHIIPDLLSAKTREMFLKNKAAELDREVGLIRTQEETGRHVRMLTHEIRSTLDRHTIL 60
MLVHIIPDLLS KTRE+FLKNKAAELDRE+GLIRTQEETGRHVRMLTHEIRSTLDRHTIL
Sbjct: 104 MLVHIIPDLLSVKTRELFLKNKAAELDREMGLIRTQEETGRHVRMLTHEIRSTLDRHTIL 163
Query: 61 KTTLVELGRTLGLEECALWMPTRTGLELQLSYTLRQQNPVGYTVPIHHPVINQVFSSNRA 120
KTTLVELGRTL LEECALWMPTRTGLELQLSYTLR Q+PV YTVPI PVINQVF ++RA
Sbjct: 164 KTTLVELGRTLALEECALWMPTRTGLELQLSYTLRHQHPVEYTVPIQLPVINQVFGTSRA 223
Query: 121 VIISPNCPVARLRPHTGKYIAGSVVAVRVPLLHLSNFQIYDWPEVSTRNYALMVLMIPSD 180
V ISPN PVARLRP +GKY+ G VVAVRVPLLHLSNFQI DWPE+ST+ YALMVLM+PSD
Sbjct: 224 VKISPNSPVARLRPVSGKYMLGEVVAVRVPLLHLSNFQINDWPELSTKRYALMVLMLPSD 283
Query: 181 SARQWXXXXXXXXXXXADQVAVALSHAAILEESMRARDLLMEQNIALDLXXXXXXXXXXX 240
SARQW ADQVAVALSHAAILEESMRARDLLMEQN+ALDL
Sbjct: 284 SARQWHVHELELVEVVADQVAVALSHAAILEESMRARDLLMEQNVALDLARREAETAIRA 343
Query: 241 XNDFLAVMNHEMRTPMHAIIAXXXXXXXXXXXXXXRLMVETILKSSNLLATLINDVLDLS 300
NDFLAVMNHEMRTPMHAIIA RLMVETILKSSNLLATL+NDVLDLS
Sbjct: 344 RNDFLAVMNHEMRTPMHAIIALSSLLQETELTPEQRLMVETILKSSNLLATLMNDVLDLS 403
Query: 301 RLEDGSFQLEAATFNLHSLFREVLNLIKPVASVKKLSLTLHLASDLPVYTIGDEKRLMQT 360
RLEDGS QLE TFNLH+LFREVLNLIKP+A VKKL +TL+LA DLP + +GDEKRLMQ
Sbjct: 404 RLEDGSLQLELGTFNLHTLFREVLNLIKPIAVVKKLPITLNLAPDLPEFVVGDEKRLMQI 463
Query: 361 MLNVVGNAVKFSKEGSISITAFVAKPESFRDIRTPDFLPVPSDGYFYLRVQVKDSGSGIN 420
+LN+VGNAVKFSK+GSIS+TA V K D R DF VP+ +FYLRV+VKDSG+GIN
Sbjct: 464 ILNIVGNAVKFSKQGSISVTALVTKS----DTRAADFFVVPTGSHFYLRVKVKDSGAGIN 519
Query: 421 PQDIPTLFTKFAQNQSPAAKSSAGNGLGLAISKRFVNLMEGDIWIESEGIGKGCTVTFVV 480
PQDIP +FTKFAQ QS A +SS G+GLGLAISKRFVNLMEG+IWIES+G+GKGCT F V
Sbjct: 520 PQDIPKIFTKFAQTQSLATRSSGGSGLGLAISKRFVNLMEGNIWIESDGLGKGCTAIFDV 579
Query: 481 KLGIPDRSNEFKLPFAPKVPVNHGSANFAGLKVLVMDDNGVSRTATKGLLVHLGCDVTSV 540
KLGI +RSNE K PKVP +NF GLKVLVMD+NGVSR TKGLLVHLGC+VT+V
Sbjct: 580 KLGISERSNESKQSGIPKVPAIPRHSNFTGLKVLVMDENGVSRMVTKGLLVHLGCEVTTV 639
Query: 541 SSSEE 545
SS+EE
Sbjct: 640 SSNEE 644
>AT2G40940.1 | Symbols: ERS1, ERS | ethylene response sensor 1 |
chr2:17084635-17086819 REVERSE LENGTH=613
Length = 613
Score = 616 bits (1589), Expect = e-176, Method: Compositional matrix adjust.
Identities = 304/484 (62%), Positives = 373/484 (77%)
Query: 1 MLVHIIPDLLSAKTREMFLKNKAAELDREVGLIRTQEETGRHVRMLTHEIRSTLDRHTIL 60
MLVHIIPDLLS K RE+FLK KA ELDRE+GLI TQEETGRHVRMLTH IR TLDRHTIL
Sbjct: 104 MLVHIIPDLLSVKNRELFLKKKADELDREMGLILTQEETGRHVRMLTHGIRRTLDRHTIL 163
Query: 61 KTTLVELGRTLGLEECALWMPTRTGLELQLSYTLRQQNPVGYTVPIHHPVINQVFSSNRA 120
+TTLVELG+TL LEECALWMP+++GL LQLS+TL + VG +VPI+ P+IN++F+S +A
Sbjct: 164 RTTLVELGKTLCLEECALWMPSQSGLYLQLSHTLSHKIQVGSSVPINLPIINELFNSAQA 223
Query: 121 VIISPNCPVARLRPHTGKYIAGSVVAVRVPLLHLSNFQIYDWPEVSTRNYALMVLMIPSD 180
+ I +CP+A++ P G+Y VV+VRVPLLHLSNFQ DW ++S + YA+MVL++P+D
Sbjct: 224 MHIPHSCPLAKIGPPVGRYSPPEVVSVRVPLLHLSNFQGSDWSDLSGKGYAIMVLILPTD 283
Query: 181 SARQWXXXXXXXXXXXADQVAVALSHAAILEESMRARDLLMEQNIALDLXXXXXXXXXXX 240
AR+W ADQVAVALSHAAILEESM ARD LMEQN ALD
Sbjct: 284 GARKWRDHELELVENVADQVAVALSHAAILEESMHARDQLMEQNFALDKARQEAEMAVHA 343
Query: 241 XNDFLAVMNHEMRTPMHAIIAXXXXXXXXXXXXXXRLMVETILKSSNLLATLINDVLDLS 300
NDFLAVMNHEMRTPMHAII+ R+M+ETILKSSNL+ATLI+DVLDLS
Sbjct: 344 RNDFLAVMNHEMRTPMHAIISLSSLLLETELSPEQRVMIETILKSSNLVATLISDVLDLS 403
Query: 301 RLEDGSFQLEAATFNLHSLFREVLNLIKPVASVKKLSLTLHLASDLPVYTIGDEKRLMQT 360
RLEDGS LE F+L ++F EV++LIKP+ASVKKLS L L++DLP Y IGDEKRLMQT
Sbjct: 404 RLEDGSLLLENEPFSLQAIFEEVISLIKPIASVKKLSTNLILSADLPTYAIGDEKRLMQT 463
Query: 361 MLNVVGNAVKFSKEGSISITAFVAKPESFRDIRTPDFLPVPSDGYFYLRVQVKDSGSGIN 420
+LN++GNAVKF+KEG ISI A + KPES +++ +P+F PV SD +FYL VQVKD+G GI+
Sbjct: 464 ILNIMGNAVKFTKEGYISIIASIMKPESLQELPSPEFFPVLSDSHFYLCVQVKDTGCGIH 523
Query: 421 PQDIPTLFTKFAQNQSPAAKSSAGNGLGLAISKRFVNLMEGDIWIESEGIGKGCTVTFVV 480
QDIP LFTKF Q ++ ++ +G GLGLA+ KRFV LM G +WIESEG+ KGCT +F++
Sbjct: 524 TQDIPLLFTKFVQPRTGTQRNHSGGGLGLALCKRFVGLMGGYMWIESEGLEKGCTASFII 583
Query: 481 KLGI 484
+LGI
Sbjct: 584 RLGI 587
>AT3G04580.2 | Symbols: EIN4 | Signal transduction histidine kinase,
hybrid-type, ethylene sensor | chr3:1235576-1237965
REVERSE LENGTH=766
Length = 766
Score = 268 bits (685), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 183/548 (33%), Positives = 286/548 (52%), Gaps = 25/548 (4%)
Query: 13 KTREMFLKNKAAELDREVGLIRTQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLG 72
K RE++LK EL+ EVGL++ Q+E VRMLT EIR +LD+H IL+TTLVEL + L
Sbjct: 139 KVRELYLKQNVLELNEEVGLMKRQKEMSVQVRMLTREIRKSLDKHMILRTTLVELSKILD 198
Query: 73 LEECALWMPTRTGLELQLSYTLRQQNPVG--YTVPIHHPVINQVFSSNRAVIISPNCPVA 130
L+ A+WMP E+ L++ LR NP+ +PI+ P + QV + I+ N +A
Sbjct: 199 LQNSAVWMPNENRTEMHLTHELR-ANPMRSFRVIPINDPDVVQVRETKVVTILRKNSVLA 257
Query: 131 RLRPHTGKYIA-GSVVAVRVPLLHLSNFQIYDWPEVSTRNYALMVLMIPSDSARQWXXXX 189
G G V A+R+P+LH NF+ PE YA+MVL++PS ++R W
Sbjct: 258 VESSGCGGSEEFGPVAAIRMPMLHGLNFK-GGTPEFVDTPYAIMVLVLPSANSRVWTDKE 316
Query: 190 XXXXXXXADQVAVALSHAAILEESMRARDLLMEQNIALDLXXXXXXXXXXXXNDFLAVMN 249
ADQVAVA+SHA++LEES R+ L QN AL N VM+
Sbjct: 317 IEIAEVVADQVAVAISHASVLEESQLMREKLGIQNRALLRAKQNAMMASQARNTCQKVMS 376
Query: 250 HEMRTPMHAIIAXXXXXXXXXXXXXXRLMVETILKSSNLLATLINDVLDLSRLEDGSFQL 309
H MR PMH I+ +++V+ ++K+S +L+ LINDV+D+S ++G L
Sbjct: 377 HGMRRPMHTILGLLSMFQSESMSLDQKIIVDALMKTSTVLSALINDVIDISPKDNGKSAL 436
Query: 310 EAATFNLHSLFREVLNLIKPVASVKKLSLTLHLASDLPVYTIGDEKRLMQTMLNVVGNAV 369
E F LHSL RE + K ++ K + + + LP +GDEKR Q ++ ++G +
Sbjct: 437 EVKRFQLHSLIREAACVAKCLSVYKGYGFEMDVQTRLPNLVVGDEKRTFQLVMYMLGYIL 496
Query: 370 KFSKEGSISITAFV-------AKPESFRDIRTPDFLPVPSDGYFYLRVQVKDSGSGINP- 421
+ +G ++T V ++ +S R+ T + SD ++ +V+ IN
Sbjct: 497 DMT-DGGKTVTFRVICEGTGTSQDKSKRE--TGMWKSHMSDDSLGVKFEVE-----INEI 548
Query: 422 QDIPTLFTKFAQNQSPAAKSSAG---NGLGLAISKRFVNLMEGDIWIESEGIGKGCTVTF 478
Q+ P + A P + + GL L + ++ +M+G+IWI + G+ ++
Sbjct: 549 QNPPLDGSAMAMRHIPNRRYHSNGIKEGLSLGMCRKLAQMMQGNIWISPKSHGQTQSMQL 608
Query: 479 VVKLGI-PDRSNEFKLPFAPKVPVNHGSANFAGLKVLVMDDNGVSRTATKGLLVHLGCDV 537
V++ P AP++ + ++ GL++ + DD+ V+RT TK LL LGC+V
Sbjct: 609 VLRFQTRPSIRRSILAGNAPELQHPNSNSILRGLRITLADDDDVNRTVTKRLLEKLGCEV 668
Query: 538 TSVSSSEE 545
T+VSS E
Sbjct: 669 TAVSSGFE 676
>AT3G04580.1 | Symbols: EIN4 | Signal transduction histidine kinase,
hybrid-type, ethylene sensor | chr3:1235576-1237965
REVERSE LENGTH=766
Length = 766
Score = 268 bits (685), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 183/548 (33%), Positives = 286/548 (52%), Gaps = 25/548 (4%)
Query: 13 KTREMFLKNKAAELDREVGLIRTQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLG 72
K RE++LK EL+ EVGL++ Q+E VRMLT EIR +LD+H IL+TTLVEL + L
Sbjct: 139 KVRELYLKQNVLELNEEVGLMKRQKEMSVQVRMLTREIRKSLDKHMILRTTLVELSKILD 198
Query: 73 LEECALWMPTRTGLELQLSYTLRQQNPVG--YTVPIHHPVINQVFSSNRAVIISPNCPVA 130
L+ A+WMP E+ L++ LR NP+ +PI+ P + QV + I+ N +A
Sbjct: 199 LQNSAVWMPNENRTEMHLTHELR-ANPMRSFRVIPINDPDVVQVRETKVVTILRKNSVLA 257
Query: 131 RLRPHTGKYIA-GSVVAVRVPLLHLSNFQIYDWPEVSTRNYALMVLMIPSDSARQWXXXX 189
G G V A+R+P+LH NF+ PE YA+MVL++PS ++R W
Sbjct: 258 VESSGCGGSEEFGPVAAIRMPMLHGLNFK-GGTPEFVDTPYAIMVLVLPSANSRVWTDKE 316
Query: 190 XXXXXXXADQVAVALSHAAILEESMRARDLLMEQNIALDLXXXXXXXXXXXXNDFLAVMN 249
ADQVAVA+SHA++LEES R+ L QN AL N VM+
Sbjct: 317 IEIAEVVADQVAVAISHASVLEESQLMREKLGIQNRALLRAKQNAMMASQARNTCQKVMS 376
Query: 250 HEMRTPMHAIIAXXXXXXXXXXXXXXRLMVETILKSSNLLATLINDVLDLSRLEDGSFQL 309
H MR PMH I+ +++V+ ++K+S +L+ LINDV+D+S ++G L
Sbjct: 377 HGMRRPMHTILGLLSMFQSESMSLDQKIIVDALMKTSTVLSALINDVIDISPKDNGKSAL 436
Query: 310 EAATFNLHSLFREVLNLIKPVASVKKLSLTLHLASDLPVYTIGDEKRLMQTMLNVVGNAV 369
E F LHSL RE + K ++ K + + + LP +GDEKR Q ++ ++G +
Sbjct: 437 EVKRFQLHSLIREAACVAKCLSVYKGYGFEMDVQTRLPNLVVGDEKRTFQLVMYMLGYIL 496
Query: 370 KFSKEGSISITAFV-------AKPESFRDIRTPDFLPVPSDGYFYLRVQVKDSGSGINP- 421
+ +G ++T V ++ +S R+ T + SD ++ +V+ IN
Sbjct: 497 DMT-DGGKTVTFRVICEGTGTSQDKSKRE--TGMWKSHMSDDSLGVKFEVE-----INEI 548
Query: 422 QDIPTLFTKFAQNQSPAAKSSAG---NGLGLAISKRFVNLMEGDIWIESEGIGKGCTVTF 478
Q+ P + A P + + GL L + ++ +M+G+IWI + G+ ++
Sbjct: 549 QNPPLDGSAMAMRHIPNRRYHSNGIKEGLSLGMCRKLAQMMQGNIWISPKSHGQTQSMQL 608
Query: 479 VVKLGI-PDRSNEFKLPFAPKVPVNHGSANFAGLKVLVMDDNGVSRTATKGLLVHLGCDV 537
V++ P AP++ + ++ GL++ + DD+ V+RT TK LL LGC+V
Sbjct: 609 VLRFQTRPSIRRSILAGNAPELQHPNSNSILRGLRITLADDDDVNRTVTKRLLEKLGCEV 668
Query: 538 TSVSSSEE 545
T+VSS E
Sbjct: 669 TAVSSGFE 676
>AT3G23150.1 | Symbols: ETR2 | Signal transduction histidine kinase,
hybrid-type, ethylene sensor | chr3:8255156-8257560
FORWARD LENGTH=773
Length = 773
Score = 263 bits (671), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 183/552 (33%), Positives = 281/552 (50%), Gaps = 41/552 (7%)
Query: 13 KTREMFLKNKAAELDREVGLIRTQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLG 72
K RE LK KA EL REVGLI ++ETG HVRMLT EIR +LDRHTIL TTLVEL +TLG
Sbjct: 145 KVREFMLKKKAHELGREVGLILIKKETGFHVRMLTQEIRKSLDRHTILYTTLVELSKTLG 204
Query: 73 LEECALWMPTRTGLELQLSYTLRQQNPV-GYTVPIHHPVINQVFSSNRAVIISPNCPVAR 131
L+ CA+WMP G E+ L++ LR + G +V + + ++ S+ ++S + +AR
Sbjct: 205 LQNCAVWMPNDGGTEMDLTHELRGRGGYGGCSVSMEDLDVVRIRESDEVNVLSVDSSIAR 264
Query: 132 LRPHTGKYIA-GSVVAVRVPLLHLSNFQIYDWPEVSTRNYALMVLMIPSDSARQWXXXXX 190
G G+V A+R+P+L +S+F E+S YA++V ++P + R W
Sbjct: 265 ASGGGGDVSEIGAVAAIRMPMLRVSDFN----GELS---YAILVCVLPGGTPRDWTYQEI 317
Query: 191 XXXXXXADQVAVALSHAAILEESMRARDLLMEQNIALDLXXXXXXXXXXXXNDFLAVMNH 250
ADQV VAL HAA+LEES R+ L EQN AL + N F M+
Sbjct: 318 EIVKVVADQVTVALDHAAVLEESQLMREKLAEQNRALQMAKRDALRASQARNAFQKTMSE 377
Query: 251 EMRTPMHAIIAXXXXXXXXXXXXXXRLMVETILKSSNLLATLINDVLDLSRLEDGSFQLE 310
MR PMH+I+ +++V+T++K+ N+++ L+ D +D+ DG F E
Sbjct: 378 GMRRPMHSILGLLSMIQDEKLSDEQKMIVDTMVKTGNVMSNLVGDSMDVP---DGRFGTE 434
Query: 311 AATFNLHSLFREVLNLIKPVASVKKLSLTLHLASDLPVYTIGDEKRLMQTMLNVVGNAVK 370
F+LH E + + + + + LP +GDE+R+ Q +L++VG+ VK
Sbjct: 435 MKPFSLHRTIHEAACMARCLCLCNGIRFLVDAEKSLPDNVVGDERRVFQVILHIVGSLVK 494
Query: 371 FSK--EGSISITAFVAKPESFRD--------IRTPDFLPVPSDGYFYLRVQVKDSGSGIN 420
K EGS S+ V K D R+P +DG Y+R ++ +
Sbjct: 495 PRKRQEGS-SLMFKVLKERGSLDRSDHRWAAWRSP---ASSADGDVYIRFEMNVENDDSS 550
Query: 421 PQDIPTLFTKFAQNQSPAAKSSAGNGLG----LAISKRFVNLMEGDIWIESEGIGKGCTV 476
Q ++ ++ + + S G GLG + K+ V L+ G+I + G T+
Sbjct: 551 SQSFASVSSR--DQEVGDVRFSGGYGLGQDLSFGVCKKVVQLIHGNISVVPGSDGSPETM 608
Query: 477 TFVVKLGIPDRSNEFKLPFAPKVPV------NHGSANFAGLKVLVMDDNGVSRTATKGLL 530
+ +++ R + + + P H ++ GL+VL++D N +R T+ LL
Sbjct: 609 SLLLRF---RRRPSISVHGSSESPAPDHHAHPHSNSLLRGLQVLLVDTNDSNRAVTRKLL 665
Query: 531 VHLGCDVTSVSS 542
LGCDVT+VSS
Sbjct: 666 EKLGCDVTAVSS 677
>AT1G04310.1 | Symbols: ERS2 | ethylene response sensor 2 |
chr1:1155116-1157125 REVERSE LENGTH=645
Length = 645
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 128/390 (32%), Positives = 205/390 (52%), Gaps = 23/390 (5%)
Query: 12 AKTREMFLKNKAAELDREVGLIRTQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTL 71
AK RE L K ELDREVG+I Q ET HVRMLT +IR++LDRHTIL TTLVEL +TL
Sbjct: 147 AKVREFMLSKKTRELDREVGIIMKQTETSLHVRMLTTKIRTSLDRHTILYTTLVELSKTL 206
Query: 72 GLEECALWMPTRTGLELQLSYTLRQQ-----------NPVGYTVPIHHPVINQVFSSNRA 120
GL+ CA+W+P E+ L++ LR + G+++PI + ++ S
Sbjct: 207 GLKNCAVWIPNEIKTEMNLTHELRPRIDDENENEHFGGYAGFSIPISESDVVRIKRSEEV 266
Query: 121 VIISPNCPVARLRPHTGKYIAGSVVAVRVPLLHLSNFQIYDWPEVSTRNYALMVLMIPSD 180
++SP +A + T + +G V +RVP+L + NF+ PE YA++V ++P
Sbjct: 267 NMLSPGSVLASV---TSRGKSGPTVGIRVPMLRVCNFK-GGTPEAIHMCYAILVCVLPLR 322
Query: 181 SARQWXXXXXXXXXXXADQVAVALSHAAILEESMRARDLLMEQNIALDLXXXXXXXXXXX 240
+ W ADQVAVA+SHA ILEES R+ L EQN AL +
Sbjct: 323 QPQAWTYQELEIVKVVADQVAVAISHAVILEESQLMREKLAEQNRALQVARENALRANQA 382
Query: 241 XNDFLAVMNHEMRTPMHAIIAXXXXXXXXXXXXXXR-LMVETILKSSNLLATLINDVLDL 299
F +M+ MR P+ +I+ + ++V+ + ++S LL L+N+ D+
Sbjct: 383 KAAFEQMMSDAMRCPVRSILGLLPLILQDGKLPENQTVIVDAMRRTSELLVQLVNNAGDI 442
Query: 300 SRLEDGSFQ-LEAATFNLHSLFREVLNLIKPVASVKKLSLTLHLASDLPVYTIGDEKRLM 358
+ +G+ + E F+LHS+ +E + + + + + LP Y +GD++++
Sbjct: 443 N---NGTIRAAETHYFSLHSVVKESACVARCLCMANGFGFSAEVYRALPDYVVGDDRKVF 499
Query: 359 QTMLNVVGNAVKFSKEGSISITAFVAKPES 388
Q +L+++G + +G+++ F PES
Sbjct: 500 QAILHMLGVLMNRKIKGNVTFWVF---PES 526
>AT5G10720.1 | Symbols: AHK5, CKI2, HK5 | histidine kinase 5 |
chr5:3386835-3390541 FORWARD LENGTH=922
Length = 922
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 140/262 (53%), Gaps = 12/262 (4%)
Query: 244 FLAVMNHEMRTPMHAIIAXXXXXXXXXXXXXXRLMVETILKSSNLLATLINDVLDLSRLE 303
LA M+HE+R+P+ ++ R ++ ++ S +L+ LIND+LDLS++E
Sbjct: 370 MLATMSHEIRSPLSGVVGMAEILSTTKLDKEQRQLLNVMISSGDLVLQLINDILDLSKVE 429
Query: 304 DGSFQLEAATFNLHSLFREVLNLIKPVASVKK-LSLTLHLASDLPVYTIGDEKRLMQTML 362
G +LEA F + + VL AS+KK L+L ++A D+P+ +GD R+ Q +
Sbjct: 430 SGVMRLEATKFRPREVVKHVLQT--AAASLKKSLTLEGNIADDVPIEVVGDVLRIRQILT 487
Query: 363 NVVGNAVKFSKEGSISIT-AFVAKPESFRD-IRTPDFLPVPSDGY----FYLRVQVKDSG 416
N++ NA+KF+ EG++ I +++P RD D +G ++ V D+G
Sbjct: 488 NLISNAIKFTHEGNVGIKLQVISEPSFVRDNALNADTEEHEQNGLTETSVWICCDVWDTG 547
Query: 417 SGINPQDIPTLFTKFAQNQSPAAKSSAGNGLGLAISKRFVNLMEGDIWIESEGIGKGCTV 476
GI +P LF K+ Q + A+ G GLGLAI K+ V LM G + + S + +G T
Sbjct: 548 IGIPENALPCLFKKYMQASADHARKYGGTGLGLAICKQLVELMGGQLTVTSR-VSEGSTF 606
Query: 477 TFVV--KLGIPDRSNEFKLPFA 496
TF++ K+G D ++ + F+
Sbjct: 607 TFILPYKVGRSDDYSDDQDEFS 628
>AT5G35750.1 | Symbols: AHK2, HK2 | histidine kinase 2 |
chr5:13911743-13916337 REVERSE LENGTH=1176
Length = 1176
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 150/338 (44%), Gaps = 42/338 (12%)
Query: 242 NDFLAVMNHEMRTPMHAIIAXXXXXXXXXXXXXXRLMVETILKSSNLLATLINDVLDLSR 301
+ FLA ++HE+RTPM+ ++ +T S L +LIN+VLD ++
Sbjct: 589 SQFLATVSHEIRTPMNGVLGMLKMLMDTDLDAKQMDYAQTAHGSGKDLTSLINEVLDQAK 648
Query: 302 LEDGSFQLEAATFNLHSLFREVLNLIKPVASVKKLSLTLHLASDLPVYTIGDEKRLMQTM 361
+E G +LE F++ + V +L+ A+ K + L ++++S +P +GD R Q +
Sbjct: 649 IESGRLELENVPFDMRFILDNVSSLLSGKANEKGIELAVYVSSQVPDVVVGDPSRFRQII 708
Query: 362 LNVVGNAVKFSKE-GSISITAFVAKP---------------------------------- 386
N+VGN++KF++E G I I+ +A
Sbjct: 709 TNLVGNSIKFTQERGHIFISVHLADEVKEPLTIEDAVLKQRLALGCSESGETVSGFPAVN 768
Query: 387 --ESFRDIRTPDFLPVPSDGYFYLRVQVKDSGSGINPQDIPTLFTKFAQNQSPAAKSSAG 444
S+++ +T + L V V+D+G GI +FT F Q S +++ G
Sbjct: 769 AWGSWKNFKTCYSTESQNSDQIKLLVTVEDTGVGIPVDAQGRIFTPFMQADSSTSRTYGG 828
Query: 445 NGLGLAISKRFVNLMEGDIWIESEGIGKGCTVTFVVKLGIPDRSNEFKLPFAPKVPVNHG 504
G+GL+ISKR V LM+G++ SE G G T +F G E +
Sbjct: 829 TGIGLSISKRLVELMQGEMGFVSEP-GIGSTFSFTGVFG----KAETNTSITKLERFDLA 883
Query: 505 SANFAGLKVLVMDDNGVSRTATKGLLVHLGCDVTSVSS 542
F GL+ LV+D+ + T+ L LG VSS
Sbjct: 884 IQEFTGLRALVIDNRNIRAEVTRYELRRLGISADIVSS 921
>AT1G27320.1 | Symbols: AHK3, HK3 | histidine kinase 3 |
chr1:9487780-9492027 FORWARD LENGTH=1036
Length = 1036
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 144/311 (46%), Gaps = 46/311 (14%)
Query: 242 NDFLAVMNHEMRTPMHAIIAXXXXXXXXXXXXXXRLMVETILKSSNLLATLINDVLDLSR 301
+ FLA ++HE+RTPM+ ++ + V T S L +LIN+VLD ++
Sbjct: 452 SQFLATVSHEIRTPMNGVLGMLHMLMDTELDVTQQDYVRTAQASGKALVSLINEVLDQAK 511
Query: 302 LEDGSFQLEAATFNLHSLFREVLNLIKPVASVKKLSLTLHLASDLPVYTIGDEKRLMQTM 361
+E G +LE F+L + +VL+L + K + L ++++ +P IGD R Q +
Sbjct: 512 IESGKLELEEVRFDLRGILDDVLSLFSSKSQQKGVELAVYISDRVPDMLIGDPGRFRQIL 571
Query: 362 LNVVGNAVKFSKEGSISITAFV-------------AKPES-------------------F 389
N++GN++KF+++G I +T + + PES F
Sbjct: 572 TNLMGNSIKFTEKGHIFVTVHLVDELFESIDGETASSPESTLSGLPVADRQRSWENFKAF 631
Query: 390 RDIRTPDFLPVPSDGYFYLRVQVKDSGSGINPQDIPTLFTKFAQNQSPAAKSSAGNGLGL 449
F P P D L V V+D+G GI + +FT F Q +++ G G+GL
Sbjct: 632 SSNGHRSFEPSPPD--INLIVSVEDTGVGIPVEAQSRIFTPFMQVGPSISRTHGGTGIGL 689
Query: 450 AISKRFVNLMEGDIWIESE-GIGKGCTVTFVVKLGI--PDRSNEFKLPFAPKVPVNHGSA 506
+ISK V LM+G+I S +G T T V G+ +R N+ P +
Sbjct: 690 SISKCLVGLMKGEIGFSSTPKVGSTFTFTAVFSNGMQPAERKNDNNQPIF---------S 740
Query: 507 NFAGLKVLVMD 517
F G+K +V+D
Sbjct: 741 EFRGMKAVVVD 751
>AT2G01830.1 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE domain
containing histidine kinase protein | chr2:363332-367429
REVERSE LENGTH=1057
Length = 1057
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 153/350 (43%), Gaps = 56/350 (16%)
Query: 242 NDFLAVMNHEMRTPMHAIIAXXXXXXXXXXXXXXRLMVETILKSSNLLATLINDVLDLSR 301
+ FLA ++HE+RTPM+ I+ R +T L LIN+VLD ++
Sbjct: 451 SQFLATVSHEIRTPMNGILGMLAMLLDTELSSTQRDYAQTAQVCGKALIALINEVLDRAK 510
Query: 302 LEDGSFQLEAATFNLHSLFREVLNLIKPVASVKKLSLTLHLASDLPVYTIGDEKRLMQTM 361
+E G +LE+ F++ S+ +VL+L + K + L + ++ +P GD R Q +
Sbjct: 511 IEAGKLELESVPFDIRSILDDVLSLFSEESRNKSIELAVFVSDKVPEIVKGDSGRFRQII 570
Query: 362 LNVVGNAVKFSKEGSISITAFVAKP----------------------------------- 386
+N+VGN+VKF+++G I + +A+
Sbjct: 571 INLVGNSVKFTEKGHIFVKVHLAEQSKDESEPKNALNGGVSEEMIVVSKQSSYNTLSGYE 630
Query: 387 --------ESFRDIRTPDFLPVPSDGYFYLRVQV--KDSGSGINPQDIPTLFTKFAQNQS 436
+SF+ + + + D +R+ V +D+G GI +F F Q S
Sbjct: 631 AADGRNSWDSFKHLVSEEQSLSEFDISSNVRLMVSIEDTGIGIPLVAQGRVFMPFMQADS 690
Query: 437 PAAKSSAGNGLGLAISKRFVNLMEGDI-WIESEGIGKGCTVTFVVKLGIPDRS---NEFK 492
+++ G G+GL+ISK V LM G I +I I G T F L D+ N K
Sbjct: 691 STSRNYGGTGIGLSISKCLVELMRGQINFISRPHI--GSTFWFTAVLEKCDKCSAINHMK 748
Query: 493 LPFAPKVPVNHGSANFAGLKVLVMDDNGVSRTATKGLLVHLGCDVTSVSS 542
P V H + F G+K +V+D V T+ + LG +V V+S
Sbjct: 749 KP-----NVEHLPSTFKGMKAIVVDAKPVRAAVTRYHMKRLGINVDVVTS 793
>AT2G01830.3 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE domain
containing histidine kinase protein | chr2:363332-367429
REVERSE LENGTH=1057
Length = 1057
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 153/350 (43%), Gaps = 56/350 (16%)
Query: 242 NDFLAVMNHEMRTPMHAIIAXXXXXXXXXXXXXXRLMVETILKSSNLLATLINDVLDLSR 301
+ FLA ++HE+RTPM+ I+ R +T L LIN+VLD ++
Sbjct: 451 SQFLATVSHEIRTPMNGILGMLAMLLDTELSSTQRDYAQTAQVCGKALIALINEVLDRAK 510
Query: 302 LEDGSFQLEAATFNLHSLFREVLNLIKPVASVKKLSLTLHLASDLPVYTIGDEKRLMQTM 361
+E G +LE+ F++ S+ +VL+L + K + L + ++ +P GD R Q +
Sbjct: 511 IEAGKLELESVPFDIRSILDDVLSLFSEESRNKSIELAVFVSDKVPEIVKGDSGRFRQII 570
Query: 362 LNVVGNAVKFSKEGSISITAFVAKP----------------------------------- 386
+N+VGN+VKF+++G I + +A+
Sbjct: 571 INLVGNSVKFTEKGHIFVKVHLAEQSKDESEPKNALNGGVSEEMIVVSKQSSYNTLSGYE 630
Query: 387 --------ESFRDIRTPDFLPVPSDGYFYLRVQV--KDSGSGINPQDIPTLFTKFAQNQS 436
+SF+ + + + D +R+ V +D+G GI +F F Q S
Sbjct: 631 AADGRNSWDSFKHLVSEEQSLSEFDISSNVRLMVSIEDTGIGIPLVAQGRVFMPFMQADS 690
Query: 437 PAAKSSAGNGLGLAISKRFVNLMEGDI-WIESEGIGKGCTVTFVVKLGIPDRS---NEFK 492
+++ G G+GL+ISK V LM G I +I I G T F L D+ N K
Sbjct: 691 STSRNYGGTGIGLSISKCLVELMRGQINFISRPHI--GSTFWFTAVLEKCDKCSAINHMK 748
Query: 493 LPFAPKVPVNHGSANFAGLKVLVMDDNGVSRTATKGLLVHLGCDVTSVSS 542
P V H + F G+K +V+D V T+ + LG +V V+S
Sbjct: 749 KP-----NVEHLPSTFKGMKAIVVDAKPVRAAVTRYHMKRLGINVDVVTS 793
>AT2G01830.2 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE domain
containing histidine kinase protein | chr2:363332-368016
REVERSE LENGTH=1080
Length = 1080
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 152/348 (43%), Gaps = 56/348 (16%)
Query: 244 FLAVMNHEMRTPMHAIIAXXXXXXXXXXXXXXRLMVETILKSSNLLATLINDVLDLSRLE 303
FLA ++HE+RTPM+ I+ R +T L LIN+VLD +++E
Sbjct: 476 FLATVSHEIRTPMNGILGMLAMLLDTELSSTQRDYAQTAQVCGKALIALINEVLDRAKIE 535
Query: 304 DGSFQLEAATFNLHSLFREVLNLIKPVASVKKLSLTLHLASDLPVYTIGDEKRLMQTMLN 363
G +LE+ F++ S+ +VL+L + K + L + ++ +P GD R Q ++N
Sbjct: 536 AGKLELESVPFDIRSILDDVLSLFSEESRNKSIELAVFVSDKVPEIVKGDSGRFRQIIIN 595
Query: 364 VVGNAVKFSKEGSISITAFVAKP------------------------------------- 386
+VGN+VKF+++G I + +A+
Sbjct: 596 LVGNSVKFTEKGHIFVKVHLAEQSKDESEPKNALNGGVSEEMIVVSKQSSYNTLSGYEAA 655
Query: 387 ------ESFRDIRTPDFLPVPSDGYFYLRVQV--KDSGSGINPQDIPTLFTKFAQNQSPA 438
+SF+ + + + D +R+ V +D+G GI +F F Q S
Sbjct: 656 DGRNSWDSFKHLVSEEQSLSEFDISSNVRLMVSIEDTGIGIPLVAQGRVFMPFMQADSST 715
Query: 439 AKSSAGNGLGLAISKRFVNLMEGDI-WIESEGIGKGCTVTFVVKLGIPDRS---NEFKLP 494
+++ G G+GL+ISK V LM G I +I I G T F L D+ N K P
Sbjct: 716 SRNYGGTGIGLSISKCLVELMRGQINFISRPHI--GSTFWFTAVLEKCDKCSAINHMKKP 773
Query: 495 FAPKVPVNHGSANFAGLKVLVMDDNGVSRTATKGLLVHLGCDVTSVSS 542
V H + F G+K +V+D V T+ + LG +V V+S
Sbjct: 774 -----NVEHLPSTFKGMKAIVVDAKPVRAAVTRYHMKRLGINVDVVTS 816
>AT2G17820.1 | Symbols: ATHK1, AHK1, HK1 | histidine kinase 1 |
chr2:7743133-7748013 REVERSE LENGTH=1207
Length = 1207
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 116/265 (43%), Gaps = 23/265 (8%)
Query: 244 FLAVMNHEMRTPMHAIIAXXXXXXXXXXXXXXRL-MVETILKSSNLLATLINDVLDLSRL 302
FLA M+HE+RTPM A+I + V I K S L L+N++LDLS++
Sbjct: 502 FLANMSHELRTPMAAVIGLLDILISDDCLSNEQYATVTQIRKCSTALLRLLNNILDLSKV 561
Query: 303 EDGSFQLEAATFNLHSLFREVLNLIKPVASVKKLSLTLHLASDLPVYTIGDEKRLMQTML 362
E G LE A F+L ++++ + L L+ D+P GD RL+Q
Sbjct: 562 ESGKLVLEEAEFDLGRELEGLVDMFSVQCINHNVETVLDLSDDMPALVRGDSARLVQIFA 621
Query: 363 NVVGNAVKFSKEGSISITAFVAKPESFRD------IRTPDFLPVPSD------------- 403
N++ N++KF+ G I + + S D R + P+ +
Sbjct: 622 NLISNSIKFTTTGHIILRGWCENINSLHDEMSVSVDRRKPWAPMKTKQVQHRNHLQKSCK 681
Query: 404 --GYFYLRVQVKDSGSGINPQDIPTLFTKFAQNQSPAAKSSAGNGLGLAISKRFVNLMEG 461
L +V D+G GI+P ++F F Q ++ G GLGL I + VN M G
Sbjct: 682 NANKMVLWFEVDDTGCGIDPSKWDSVFESFEQADPSTTRTHGGTGLGLCIVRNLVNKMGG 741
Query: 462 DIWIESEGIGKGCTVTFVVKLGIPD 486
+I + + G G + + L PD
Sbjct: 742 EIKVVQKN-GLGTLMRLYLILSTPD 765
>AT2G47430.1 | Symbols: CKI1 | Signal transduction histidine kinase
| chr2:19459167-19463122 REVERSE LENGTH=1122
Length = 1122
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 106/240 (44%), Gaps = 37/240 (15%)
Query: 279 VETILKSSNLLA----TLINDVLDLSRLEDGSFQLEAATFNLHSLFREVLNLIKPVASVK 334
V+T L N+ A L+N VLD+S++E G QL FNL L +V++ PVA K
Sbjct: 431 VDTTLNQVNVCAKDLVALLNSVLDMSKIESGKMQLVEEDFNLSKLLEDVIDFYHPVAMKK 490
Query: 335 KLSLTL--HLASDLPVYTI-GDEKRLMQTMLNVVGNAVKFSKEGSISITAFVAKPESFRD 391
+ + L H S + GD RL Q + N+V NAVKF+ +G I++ A+ +P S
Sbjct: 491 GVDVVLDPHDGSVFKFSNVRGDSGRLKQILNNLVSNAVKFTVDGHIAVRAWAQRPGSNSS 550
Query: 392 IRTPD------------FLPVPSDGYFY----------------LRVQVKDSGSGINPQD 423
+ F + Y +V D+G GI +
Sbjct: 551 VVLASYPKGVSKFVKSMFCKNKEESSTYETEISNSIRNNANTMEFVFEVDDTGKGIPMEM 610
Query: 424 IPTLFTKFAQNQSPAAKSSAGNGLGLAISKRFVNLMEGDIWIESEGIG-KGCTVTFVVKL 482
++F + Q + A+ G GLGL I + V LM G+I I + +G KG F V L
Sbjct: 611 RKSVFENYVQVRE-TAQGHQGTGLGLGIVQSLVRLMGGEIRITDKAMGEKGTCFQFNVLL 669
>AT4G16250.1 | Symbols: PHYD | phytochrome D | chr4:9195602-9199486
REVERSE LENGTH=1164
Length = 1164
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 96/192 (50%), Gaps = 26/192 (13%)
Query: 276 RLMVETILKSSNLLATLINDVLDLSRLEDGSFQLEAATFNLHSLFREVLNLIKPVASVKK 335
+ ++ET + ++ ++ D +D+ ++DGSF LE F + ++ V++ + V +
Sbjct: 967 KQLLETSVSCEKQISKIVGD-MDVKSIDDGSFLLERTEFFIGNVTNAVVSQVMLVVRERN 1025
Query: 336 LSLTLHLASDLPVYTI-GDEKRLMQTMLNVVGNAVKFSK-EGSISITAFVAKPESFRDIR 393
L L ++ +++ + GD+ RL Q + + + V+++ EGS+ ++
Sbjct: 1026 LQLIRNIPTEVKSMAVYGDQIRLQQVLAEFLLSIVRYAPMEGSV-------------ELH 1072
Query: 394 TPDFLPVPSDGYFYLRVQVK--DSGSGINPQDIPTLFTKFAQNQSPAAKSSAGNGLGLAI 451
L +DG+ +R++ + +G G+ P+ + +F +++ ++ GLGL++
Sbjct: 1073 LCPTLNQMADGFSAVRLEFRMACAGEGVPPEKVQDMFH--------SSRWTSPEGLGLSV 1124
Query: 452 SKRFVNLMEGDI 463
++ + LM G +
Sbjct: 1125 CRKILKLMNGGV 1136