Miyakogusa Predicted Gene

Lj0g3v0302139.2
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0302139.2 Non Chatacterized Hit- tr|I1N2U7|I1N2U7_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
GN=G,93.07,0,Glyco_trans_4_4,NULL; Glycos_transf_1,Glycosyl
transferase, family 1; OS11G0236100 PROTEIN,NULL; GLY,CUFF.20311.2
         (288 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G01220.1 | Symbols: SQD2 | sulfoquinovosyldiacylglycerol 2 | ...   491   e-139

>AT5G01220.1 | Symbols: SQD2 | sulfoquinovosyldiacylglycerol 2 |
           chr5:86907-89885 REVERSE LENGTH=510
          Length = 510

 Score =  491 bits (1265), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 231/274 (84%), Positives = 258/274 (94%)

Query: 10  YVSGYKNRFQNFIKCLREMGDEVMVVTTHKGVPQEFYGAKLIGSWSFPCPLYQKVPLSLA 69
           YVSGYKNRFQNFI+ LREMGDEV+VVTTH+GVP+EFYGA++IGS SFPCP YQKVPLSLA
Sbjct: 117 YVSGYKNRFQNFIRYLREMGDEVIVVTTHEGVPEEFYGARVIGSRSFPCPYYQKVPLSLA 176

Query: 70  LSPRIISEVARFKPDIIHASSPGIMVFGALIIAKLLCVPIVMSYHTHVPVYIPRYTFSWL 129
           LSPRIISE+ARFKPDIIHASSPG+MVFGAL IAK+L VPIVMSYHTHVPVYIPRYTFSWL
Sbjct: 177 LSPRIISEIARFKPDIIHASSPGVMVFGALAIAKMLSVPIVMSYHTHVPVYIPRYTFSWL 236

Query: 130 VKPMWLIIKFLHRAADLTLVPSVAIGRDLQAAKVTAANKIRLWSKGVDSESFHPRYRSHE 189
           VKPMW II+FLHRAADLTLVPS AIG+DL AA  TAAN++RLW+KGVDSESF+PR+RS E
Sbjct: 237 VKPMWSIIRFLHRAADLTLVPSAAIGKDLIAAGATAANQLRLWNKGVDSESFNPRFRSQE 296

Query: 190 MRLRLSNGEPEKPLIVHVGRLGVEKSLDFLKRVMDRLPEARIAFVGDGPYREELEKMFEG 249
           MR+RLSNGEPEKPL++HVGR+GVEKSL+ LK VMD+LPEARIAF+GDGPY+E+LEK+F G
Sbjct: 297 MRIRLSNGEPEKPLVIHVGRIGVEKSLELLKSVMDKLPEARIAFIGDGPYKEDLEKLFTG 356

Query: 250 MPAVFTGMLGGEELSQAYASGDVFVMPSESETLG 283
           MPAVFTG L G+ELSQAYASGDVFVMPSESETLG
Sbjct: 357 MPAVFTGTLQGDELSQAYASGDVFVMPSESETLG 390