Miyakogusa Predicted Gene

Lj0g3v0301569.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0301569.1 tr|G7KYV1|G7KYV1_MEDTR Receptor-like protein
kinase OS=Medicago truncatula GN=MTR_7g009420 PE=4
SV=1,67.12,3e-18,LRRNT_2,Leucine-rich repeat-containing N-terminal,
type 2,gene.Ljchr0_pseudomol_20120828.path1.gene30984.1
         (79 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G45616.1 | Symbols: AtRLP6, RLP6 | receptor like protein 6 | ...    62   1e-10
AT1G47890.1 | Symbols: AtRLP7, RLP7 | receptor like protein 7 | ...    60   3e-10
AT4G13820.1 | Symbols:  | Leucine-rich repeat (LRR) family prote...    59   6e-10
AT1G71390.1 | Symbols: AtRLP11, RLP11 | receptor like protein 11...    57   3e-09
AT4G13810.2 | Symbols: RLP47 | receptor like protein 47 | chr4:8...    57   3e-09
AT3G11080.1 | Symbols: AtRLP35, RLP35 | receptor like protein 35...    55   8e-09
AT4G13920.1 | Symbols: AtRLP50, RLP50 | receptor like protein 50...    55   1e-08
AT2G15080.2 | Symbols: AtRLP19, RLP19 | receptor like protein 19...    54   2e-08
AT2G15080.1 | Symbols: AtRLP19, RLP19 | receptor like protein 19...    54   2e-08
AT3G05660.1 | Symbols: AtRLP33, RLP33 | receptor like protein 33...    50   2e-07
AT1G71400.1 | Symbols: AtRLP12, RLP12 | receptor like protein 12...    50   2e-07
AT4G13810.1 | Symbols: AtRLP47, RLP47 | receptor like protein 47...    50   3e-07
AT3G05360.1 | Symbols: AtRLP30, RLP30 | receptor like protein 30...    49   9e-07
AT3G05650.1 | Symbols: AtRLP32, RLP32 | receptor like protein 32...    49   9e-07
AT3G28890.2 | Symbols: AtRLP43, RLP43 | receptor like protein 43...    49   9e-07
AT3G28890.1 | Symbols: AtRLP43, RLP43 | receptor like protein 43...    49   9e-07
AT4G13880.1 | Symbols: AtRLP48, RLP48 | receptor like protein 48...    48   1e-06
AT3G11010.1 | Symbols: AtRLP34, RLP34 | receptor like protein 34...    47   2e-06
AT5G27060.1 | Symbols: AtRLP53, RLP53 | receptor like protein 53...    47   3e-06

>AT1G45616.1 | Symbols: AtRLP6, RLP6 | receptor like protein 6 |
           chr1:17183550-17186534 REVERSE LENGTH=994
          Length = 994

 Score = 61.6 bits (148), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)

Query: 23  SYPKVASWNASTDCCSSWDGIQCDEHPGHVIGIDLSSSQLYGYLDSNSSLF 73
           SYPK  SW  ++DCC  WDGI CD   G V G+DLS S L+G L+ NSSLF
Sbjct: 71  SYPKTKSWTKNSDCCY-WDGITCDTKSGKVTGLDLSCSCLHGRLEPNSSLF 120


>AT1G47890.1 | Symbols: AtRLP7, RLP7 | receptor like protein 7 |
           chr1:17643976-17647035 FORWARD LENGTH=1019
          Length = 1019

 Score = 60.1 bits (144), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/55 (56%), Positives = 35/55 (63%), Gaps = 1/55 (1%)

Query: 19  RNPLSYPKVASWNASTDCCSSWDGIQCDEHPGHVIGIDLSSSQLYGYLDSNSSLF 73
           +N        SW   +DCCS WDGI CD   G+VIG+DLSS  LYG L SNSSLF
Sbjct: 86  KNEFGMVDSKSWVNKSDCCS-WDGITCDAKSGNVIGLDLSSIFLYGQLKSNSSLF 139


>AT4G13820.1 | Symbols:  | Leucine-rich repeat (LRR) family protein
           | chr4:8008535-8010694 REVERSE LENGTH=719
          Length = 719

 Score = 58.9 bits (141), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 1/71 (1%)

Query: 3   CCMQFKEGFVINELASRNPLSYPKVASWNASTDCCSSWDGIQCDEHPGHVIGIDLSSSQL 62
             ++FK  F ++E  S   +   K   W  +TDCCS WDGI CD   G V+ +DL +S L
Sbjct: 36  ALLEFKNEFYVHEFNSNGIVGVKKTEKWRNNTDCCS-WDGISCDPKTGKVVELDLMNSFL 94

Query: 63  YGYLDSNSSLF 73
            G L  +SSLF
Sbjct: 95  NGPLRYDSSLF 105


>AT1G71390.1 | Symbols: AtRLP11, RLP11 | receptor like protein 11
          | chr1:26906453-26908807 FORWARD LENGTH=784
          Length = 784

 Score = 56.6 bits (135), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 27/53 (50%), Positives = 35/53 (66%), Gaps = 1/53 (1%)

Query: 21 PLSYPKVASWNASTDCCSSWDGIQCDEHPGHVIGIDLSSSQLYGYLDSNSSLF 73
          P+   K + WN +TDCCS WDG+ CD+  G VI +DL S+ L   L +NSSLF
Sbjct: 48 PIFESKSSPWNKTTDCCS-WDGVTCDDKSGQVISLDLRSTLLNSSLKTNSSLF 99


>AT4G13810.2 | Symbols: RLP47 | receptor like protein 47 |
           chr4:8005062-8007464 REVERSE LENGTH=706
          Length = 706

 Score = 56.6 bits (135), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 35/60 (58%), Gaps = 1/60 (1%)

Query: 14  NELASRNPLSYPKVASWNASTDCCSSWDGIQCDEHPGHVIGIDLSSSQLYGYLDSNSSLF 73
           NE    +P SY     W  +TDCCS WDG+ CD   G V+ +DL  S L G L SNSSLF
Sbjct: 48  NEFNVPSPHSYAMTEKWRNNTDCCS-WDGVSCDPKTGVVVELDLQYSHLNGPLRSNSSLF 106


>AT3G11080.1 | Symbols: AtRLP35, RLP35 | receptor like protein 35 |
           chr3:3470481-3473312 FORWARD LENGTH=943
          Length = 943

 Score = 55.1 bits (131), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 33/50 (66%), Gaps = 1/50 (2%)

Query: 24  YPKVASWNASTDCCSSWDGIQCDEHPGHVIGIDLSSSQLYGYLDSNSSLF 73
           +P   SW  ++DCC+ W+GI CD   G VI +DLS S LYG   SNSSLF
Sbjct: 74  HPTTESWRNNSDCCN-WEGITCDTKSGEVIELDLSCSWLYGSFHSNSSLF 122


>AT4G13920.1 | Symbols: AtRLP50, RLP50 | receptor like protein 50 |
           chr4:8043861-8046536 FORWARD LENGTH=891
          Length = 891

 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/71 (45%), Positives = 38/71 (53%), Gaps = 1/71 (1%)

Query: 3   CCMQFKEGFVINELASRNPLSYPKVASWNASTDCCSSWDGIQCDEHPGHVIGIDLSSSQL 62
             ++FK  F I    S   L     A W  +TDCCS W GI CD   G V+ +DL +S L
Sbjct: 33  ALLEFKNEFSIPSPDSDLMLILQTTAKWRNNTDCCS-WGGISCDPKTGVVVELDLGNSDL 91

Query: 63  YGYLDSNSSLF 73
            G L SNSSLF
Sbjct: 92  NGRLRSNSSLF 102


>AT2G15080.2 | Symbols: AtRLP19, RLP19 | receptor like protein 19 |
           chr2:6533764-6536715 FORWARD LENGTH=983
          Length = 983

 Score = 53.9 bits (128), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/74 (47%), Positives = 42/74 (56%), Gaps = 7/74 (9%)

Query: 3   CCMQFKEGFVINE---LASRNPLSYPKVASWNASTDCCSSWDGIQCDEHPGHVIGIDLSS 59
             ++FK  F   E     S  PL   K  SW  ++DCC  WDGI+CD   G VI +DLS 
Sbjct: 37  AILEFKNEFETLEESCFDSNIPL---KTESWTNNSDCCY-WDGIKCDAKFGDVIELDLSF 92

Query: 60  SQLYGYLDSNSSLF 73
           S L G L+SNSSLF
Sbjct: 93  SCLRGQLNSNSSLF 106


>AT2G15080.1 | Symbols: AtRLP19, RLP19 | receptor like protein 19 |
           chr2:6533764-6536715 FORWARD LENGTH=983
          Length = 983

 Score = 53.9 bits (128), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/74 (47%), Positives = 42/74 (56%), Gaps = 7/74 (9%)

Query: 3   CCMQFKEGFVINE---LASRNPLSYPKVASWNASTDCCSSWDGIQCDEHPGHVIGIDLSS 59
             ++FK  F   E     S  PL   K  SW  ++DCC  WDGI+CD   G VI +DLS 
Sbjct: 37  AILEFKNEFETLEESCFDSNIPL---KTESWTNNSDCCY-WDGIKCDAKFGDVIELDLSF 92

Query: 60  SQLYGYLDSNSSLF 73
           S L G L+SNSSLF
Sbjct: 93  SCLRGQLNSNSSLF 106


>AT3G05660.1 | Symbols: AtRLP33, RLP33 | receptor like protein 33 |
           chr3:1649258-1652001 REVERSE LENGTH=875
          Length = 875

 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/72 (43%), Positives = 39/72 (54%), Gaps = 6/72 (8%)

Query: 3   CCMQFKEGFVINE--LASRNPLSYPKVASWNASTDCCSSWDGIQCDEHPGHVIGIDLSSS 60
             ++FK  F I +      +PL   K  SW   +DCC  WDGI CD   G VI IDL  S
Sbjct: 37  ALLEFKNEFKIKKPCFGCPSPL---KTKSWENGSDCCH-WDGITCDAKTGEVIEIDLMCS 92

Query: 61  QLYGYLDSNSSL 72
            L+G+  SNS+L
Sbjct: 93  CLHGWFHSNSNL 104


>AT1G71400.1 | Symbols: AtRLP12, RLP12 | receptor like protein 12 |
           chr1:26909905-26912448 FORWARD LENGTH=847
          Length = 847

 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 22/44 (50%), Positives = 31/44 (70%), Gaps = 1/44 (2%)

Query: 30  WNASTDCCSSWDGIQCDEHPGHVIGIDLSSSQLYGYLDSNSSLF 73
           WN STDCC  W+G+ C++  G VI +D+ ++ L  YL +NSSLF
Sbjct: 65  WNKSTDCCL-WNGVTCNDKSGQVISLDIPNTFLNNYLKTNSSLF 107


>AT4G13810.1 | Symbols: AtRLP47, RLP47 | receptor like protein 47
          | chr4:8005062-8007287 REVERSE LENGTH=741
          Length = 741

 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 29/44 (65%), Gaps = 1/44 (2%)

Query: 30 WNASTDCCSSWDGIQCDEHPGHVIGIDLSSSQLYGYLDSNSSLF 73
          W  +TDCCS WDG+ CD   G V+ +DL  S L G L SNSSLF
Sbjct: 5  WRNNTDCCS-WDGVSCDPKTGVVVELDLQYSHLNGPLRSNSSLF 47


>AT3G05360.1 | Symbols: AtRLP30, RLP30 | receptor like protein 30 |
           chr3:1530900-1533260 REVERSE LENGTH=786
          Length = 786

 Score = 48.5 bits (114), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 6/71 (8%)

Query: 3   CCMQFKEGFVINELASRNPLSYPKVASWNASTDCCSSWDGIQCDEHPGHVIGIDLSSSQL 62
             ++FK  F ++E         P ++SWN ++DCC  W+G+ CD+  G V+ +DLS   L
Sbjct: 44  ALLEFKHEFPVSESKPS-----PSLSSWNKTSDCCF-WEGVTCDDESGEVVSLDLSYVLL 97

Query: 63  YGYLDSNSSLF 73
              L   S LF
Sbjct: 98  NNSLKPTSGLF 108


>AT3G05650.1 | Symbols: AtRLP32, RLP32 | receptor like protein 32 |
           chr3:1645884-1648490 REVERSE LENGTH=868
          Length = 868

 Score = 48.5 bits (114), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 1/50 (2%)

Query: 24  YPKVASWNASTDCCSSWDGIQCDEHPGHVIGIDLSSSQLYGYLDSNSSLF 73
           +P   SW  ++DCC  WDGI C++  G V+ +DLS S L     SNSSLF
Sbjct: 65  HPTTESWANNSDCCY-WDGITCNDKSGEVLELDLSRSCLQSRFHSNSSLF 113


>AT3G28890.2 | Symbols: AtRLP43, RLP43 | receptor like protein 43 |
           chr3:10896706-10898841 REVERSE LENGTH=711
          Length = 711

 Score = 48.5 bits (114), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 24/50 (48%), Positives = 34/50 (68%), Gaps = 2/50 (4%)

Query: 24  YPKVASW-NASTDCCSSWDGIQCDEHPGHVIGIDLSSSQLYGYLDSNSSL 72
           +PK  SW N ++DCC+ W+G+ C+   G VI +DLS S L+G   SNSS+
Sbjct: 69  HPKTESWGNNNSDCCN-WEGVTCNAKSGEVIELDLSCSYLHGRFHSNSSI 117


>AT3G28890.1 | Symbols: AtRLP43, RLP43 | receptor like protein 43 |
           chr3:10896706-10898841 REVERSE LENGTH=711
          Length = 711

 Score = 48.5 bits (114), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 24/50 (48%), Positives = 34/50 (68%), Gaps = 2/50 (4%)

Query: 24  YPKVASW-NASTDCCSSWDGIQCDEHPGHVIGIDLSSSQLYGYLDSNSSL 72
           +PK  SW N ++DCC+ W+G+ C+   G VI +DLS S L+G   SNSS+
Sbjct: 69  HPKTESWGNNNSDCCN-WEGVTCNAKSGEVIELDLSCSYLHGRFHSNSSI 117


>AT4G13880.1 | Symbols: AtRLP48, RLP48 | receptor like protein 48 |
           chr4:8026151-8028614 FORWARD LENGTH=725
          Length = 725

 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 36/71 (50%), Gaps = 2/71 (2%)

Query: 3   CCMQFKEGFVINELASRNPLSYPKVASWNASTDCCSSWDGIQCDEHPGHVIGIDLSSSQL 62
             ++FK  F + E             +W   TDCCS W+ + CD   G V+ +DL SS L
Sbjct: 41  ALLEFKNEFYVQEFDPHMKCE-KATETWRNKTDCCS-WNRVSCDPKTGKVVELDLMSSCL 98

Query: 63  YGYLDSNSSLF 73
            G L SNSSLF
Sbjct: 99  NGPLRSNSSLF 109


>AT3G11010.1 | Symbols: AtRLP34, RLP34 | receptor like protein 34
          | chr3:3450988-3453672 REVERSE LENGTH=894
          Length = 894

 Score = 47.0 bits (110), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 1/50 (2%)

Query: 23 SYPKVASWNASTDCCSSWDGIQCDEHPGHVIGIDLSSSQLYGYLDSNSSL 72
          S+ K  SW  ++DCC+ W+G+ C+   G VI ++LS S L+G   SNSS+
Sbjct: 6  SHRKTESWGNNSDCCN-WEGVTCNAKSGEVIELNLSCSSLHGRFHSNSSI 54


>AT5G27060.1 | Symbols: AtRLP53, RLP53 | receptor like protein 53 |
           chr5:9522534-9525407 REVERSE LENGTH=957
          Length = 957

 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 1/47 (2%)

Query: 26  KVASWNASTDCCSSWDGIQCDEHPGHVIGIDLSSSQLYGYLDSNSSL 72
           K  SW  ++DCC+ W+G+ C+   G VI +DLS S L+G   SNSS+
Sbjct: 72  KTDSWGNNSDCCN-WEGVTCNAKSGEVIELDLSCSSLHGRFHSNSSI 117