Miyakogusa Predicted Gene
- Lj0g3v0301359.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0301359.1 Non Chatacterized Hit- tr|B8BBH4|B8BBH4_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,35.09,0.000000008,RNI-like,NULL; F-box-like,NULL; no
description,NULL; seg,NULL; FBOX,F-box domain, cyclin-like;
N7-RE,gene.g23434.t1.1
(309 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G05460.1 | Symbols: | RNI-like superfamily protein | chr4:27... 209 2e-54
AT4G05475.1 | Symbols: | RNI-like superfamily protein | chr4:27... 182 2e-46
AT4G05470.1 | Symbols: | RNI-like superfamily protein | chr4:27... 167 9e-42
AT4G05497.1 | Symbols: | RNI-like superfamily protein | chr4:27... 155 3e-38
AT4G05490.1 | Symbols: | RNI-like superfamily protein | chr4:27... 148 5e-36
AT4G03630.1 | Symbols: | RNI-like superfamily protein | chr4:16... 142 2e-34
AT5G52480.1 | Symbols: | RNI-like superfamily protein | chr5:21... 129 4e-30
AT5G52480.2 | Symbols: | RNI-like superfamily protein | chr5:21... 108 5e-24
AT5G57900.1 | Symbols: SKIP1 | SKP1 interacting partner 1 | chr5... 84 1e-16
AT4G30640.1 | Symbols: | RNI-like superfamily protein | chr4:14... 80 2e-15
AT4G08980.5 | Symbols: FBW2 | F-BOX WITH WD-40 2 | chr4:5758993-... 75 4e-14
AT4G08980.4 | Symbols: FBW2 | F-BOX WITH WD-40 2 | chr4:5758993-... 75 4e-14
AT4G08980.2 | Symbols: FBW2 | F-BOX WITH WD-40 2 | chr4:5758993-... 75 4e-14
AT4G08980.3 | Symbols: FBW2 | F-BOX WITH WD-40 2 | chr4:5758993-... 75 4e-14
AT4G08980.1 | Symbols: FBW2 | F-BOX WITH WD-40 2 | chr4:5758993-... 75 4e-14
AT3G48880.2 | Symbols: | RNI-like superfamily protein | chr3:18... 68 8e-12
AT3G48880.1 | Symbols: | RNI-like superfamily protein | chr3:18... 68 8e-12
AT5G23340.1 | Symbols: | RNI-like superfamily protein | chr5:78... 48 7e-06
AT5G27920.1 | Symbols: | F-box family protein | chr5:9942063-99... 48 1e-05
>AT4G05460.1 | Symbols: | RNI-like superfamily protein |
chr4:2761106-2762400 REVERSE LENGTH=302
Length = 302
Score = 209 bits (531), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 123/265 (46%), Positives = 156/265 (58%), Gaps = 8/265 (3%)
Query: 2 MACSEERAEKKAKGESTLGPNWLELPREVTAKILHKLSPFEILNGASPVCPLWWEICKDP 61
MA S GEST NW ELP E+T+ ILH+L EIL A VC W +CKDP
Sbjct: 1 MASSSSPPAAMEVGEST---NWTELPPELTSAILHRLGAIEILENAQKVCRSWRRVCKDP 57
Query: 62 IMWRTIDMTNPPPYPHS--KLVGFCRLAIKLSCGHLEDISIEDFCTNKILKDIADSGSHL 119
MWR IDM N L CR A+ S G L DI I F T +L IA S+L
Sbjct: 58 SMWRKIDMHNLGDLDDMDYNLEIMCRHAVDRSQGGLVDIGIWYFGTVDLLNYIAHRSSNL 117
Query: 120 RRLRLLKCEKMYDKGLSVVVKNLPMLEEFEISFGDLSTYNLEVLGKCCPYLEVLKFNKKE 179
R LRL++C ++ D G V LP LEE E+S+ S +L V+G+CC ++ LK NK
Sbjct: 118 RSLRLIRCSQITDDGFVEAVVKLP-LEELELSYCSFSVESLRVVGQCCLNMKTLKLNKHP 176
Query: 180 NKEYQCDDEAFAIAKTMPRLRHLQLLGNRLTNQGLLAILDGCPCLESLDLRVCSNVDLSG 239
KE DD+A AIA+TMP+LRHLQL GN L++ GL AILD C LE LDLR C NV+L G
Sbjct: 177 QKEN--DDDALAIAETMPKLRHLQLCGNGLSDTGLNAILDNCSNLEHLDLRRCFNVNLVG 234
Query: 240 SLRERCWKQIRDLRFPEDLSDEVGI 264
L++RC++ ++ +R P D ++ I
Sbjct: 235 DLQKRCFESVKVVRHPNDSIHDIDI 259
>AT4G05475.1 | Symbols: | RNI-like superfamily protein |
chr4:2765962-2767957 REVERSE LENGTH=309
Length = 309
Score = 182 bits (462), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/249 (42%), Positives = 149/249 (59%), Gaps = 15/249 (6%)
Query: 22 NWLELPREVTAKILHKLSPFEILNGASPVCPLWWEICKDPIMWRTIDMTNPPPYPHSKLV 81
NW++LP E+T IL +LS +IL+ A +C W ICKDP MWR I++ + Y
Sbjct: 39 NWVDLPPELTTSILLRLSVTDILDNARKLCRAWRRICKDPSMWRKINLRDCLMYEFD-FE 97
Query: 82 GFCRLAIKLSCGHLEDISIEDFCTNKILKDIADSGSHLRRLRLLKCEKMYDKGLSVVVKN 141
CR + LS G L +I+IE F ++ +L I D +L+ L + E M +KG+ ++
Sbjct: 98 SMCRHIVDLSQGGLLEINIEHFVSDSLLSYIVDRSCNLKSLGISIYEPMTNKGVMNGIEK 157
Query: 142 LPMLEEFEISFGDLSTYNLEVLGKCCPYLEVLKFNKKENKE------------YQCDDEA 189
LP+LE I F +L+ +G CP L+ LK N ++ +CDD+A
Sbjct: 158 LPLLETLVI-FHSSIKLDLKAIGHACPQLKTLKLNSLGSELAHDISQVGYIPLLECDDDA 216
Query: 190 FAIAKTMPRLRHLQLLGNRLTNQGLLAILDGCPCL-ESLDLRVCSNVDLSGSLRERCWKQ 248
AIA++MP+LRHLQL+GN LTN GL AILDGCP L E LD+R C N++L G+L +RC K+
Sbjct: 217 LAIAESMPKLRHLQLMGNGLTNTGLNAILDGCPHLEEHLDVRKCFNINLVGNLEKRCMKR 276
Query: 249 IRDLRFPED 257
I++LR P D
Sbjct: 277 IKELRRPHD 285
>AT4G05470.1 | Symbols: | RNI-like superfamily protein |
chr4:2763256-2765351 REVERSE LENGTH=304
Length = 304
Score = 167 bits (423), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 102/254 (40%), Positives = 144/254 (56%), Gaps = 22/254 (8%)
Query: 22 NWLELPREVTAKILHKLSPFEILNGASPVCPLWWEICKDPIMWRTIDMTNPPPYPHSKLV 81
NW++LP E+T IL +LS +IL+ A VC W ICKDP MWR I+ + Y + V
Sbjct: 45 NWVDLPPELTTSILLRLSLTDILDNAQKVCKEWRRICKDPSMWRKINTRDCLMY-NFDFV 103
Query: 82 GFCRLAIKLSCGHLEDISI-EDFCTNKILKDIADSGSHLRRLRLLKCEKMYDK-GLSVVV 139
CR + LS G L +I++ E F ++ +L I D +LR L L C K G+ +
Sbjct: 104 SMCRHIVDLSQGGLLEINVDEHFLSDSLLSYITDR--NLRSLGLGMCFPRVTKLGVVNAI 161
Query: 140 KNLPMLEEFEISFGDLSTYNLEVLGKCCPYLEVLKFNK----------------KENKEY 183
+P+LE E++ + +L+ +G CP L+ LK N +
Sbjct: 162 AKIPLLETLEVTHSCIK-LDLKAIGHACPQLKTLKLNSLGRLWPASDKYDSNVLDDMGPL 220
Query: 184 QCDDEAFAIAKTMPRLRHLQLLGNRLTNQGLLAILDGCPCLESLDLRVCSNVDLSGSLRE 243
+CDD+A AIA++MP+L HLQL+ NRLTN GL AILDGCP LE LD+R C + L G+L +
Sbjct: 221 ECDDDALAIAESMPKLHHLQLMANRLTNTGLNAILDGCPHLEHLDVRKCFRISLVGNLEK 280
Query: 244 RCWKQIRDLRFPED 257
RC + I++LR P D
Sbjct: 281 RCLEMIKELRRPGD 294
>AT4G05497.1 | Symbols: | RNI-like superfamily protein |
chr4:2777903-2778801 REVERSE LENGTH=246
Length = 246
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 91/226 (40%), Positives = 129/226 (57%), Gaps = 7/226 (3%)
Query: 22 NWLELPREVTAKILHKLSPFEILNGASPVCPLWWEICKDPIMWRTIDMTNPPPYPHSKLV 81
NW ELP E+T+ IL +L EIL A VC W +C+DP MWR ID+ +S +
Sbjct: 20 NWAELPPELTSSILLRLGAIEILQNAQRVCKSWRRVCQDPSMWRKIDIRIKENLVNSVEL 79
Query: 82 GF-----CRLAIKLSCGHLEDISIEDFCTNKILKDIADSGSHLRRLRLLKCEKMYDKGLS 136
+ C A+ LS G L +I+I+ L IAD S+LRRL ++ C + +G+
Sbjct: 80 FYVIEPLCCRAVDLSQGGLLEINIDYLVNTSFLNYIADRSSNLRRLGVVDCAPVLSRGVV 139
Query: 137 VVVKNLPMLEEFEISF-GDLSTYNLEVLGKCCPYLEVLKFNKKENKEYQCDDEAFAIAKT 195
LP+LEE +I++ + L+V+G+ CP L LK N + + CD A AIA+T
Sbjct: 140 EAAMKLPLLEELDITYKSSIREQELKVVGQSCPNLRTLKLNCTGDVKC-CDKVALAIAET 198
Query: 196 MPRLRHLQLLGNRLTNQGLLAILDGCPCLESLDLRVCSNVDLSGSL 241
MP LRHLQL N L+ GL AIL+GCP L++L L C N+++ G +
Sbjct: 199 MPGLRHLQLFRNGLSETGLNAILEGCPHLKNLGLHQCLNINIVGDI 244
>AT4G05490.1 | Symbols: | RNI-like superfamily protein |
chr4:2771044-2772252 REVERSE LENGTH=307
Length = 307
Score = 148 bits (373), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 102/248 (41%), Positives = 146/248 (58%), Gaps = 4/248 (1%)
Query: 22 NWLELPREVTAKILHKLSPFEILNGASPVCPLWWEICKDPIMWRTIDMTNPPP-YPHSKL 80
NW ELP ++ + IL +LSP EIL A VC W + KDP++WR IDM N Y +
Sbjct: 26 NWAELPPDLLSSILLRLSPLEILENARKVCRSWRRVSKDPLIWRRIDMRNLRRLYCIYAM 85
Query: 81 VGFCRLAIKLSCGHLEDISIED--FCTNKILKDIADSGSHLRRLRLLKCEKMYDKGLSVV 138
CR + LS G L + +I+ F T +L +A+ S+LRRLR+ K ++ G+
Sbjct: 86 EACCRHVVDLSQGGLLEFNIDQWRFQTTSLLNYMAERSSNLRRLRV-KGGQITSVGIFEA 144
Query: 139 VKNLPMLEEFEISFGDLSTYNLEVLGKCCPYLEVLKFNKKENKEYQCDDEAFAIAKTMPR 198
+ LP+LEE E+ + + + + +G+ CP L+ LK + + D++A AIA TMP
Sbjct: 145 IVKLPLLEELELLYCSIEEEHFKTIGQACPNLKTLKLVGFWSHLNESDNDALAIADTMPG 204
Query: 199 LRHLQLLGNRLTNQGLLAILDGCPCLESLDLRVCSNVDLSGSLRERCWKQIRDLRFPEDL 258
L HLQL+ N LTN GL AILDGCP LE LDLR C N++L G L +C ++I+D R P D+
Sbjct: 205 LLHLQLISNGLTNIGLNAILDGCPHLECLDLRQCFNINLFGDLERQCLERIKDFRCPNDV 264
Query: 259 SDEVGIYV 266
D+ +
Sbjct: 265 LDDYNYVI 272
>AT4G03630.1 | Symbols: | RNI-like superfamily protein |
chr4:1608750-1610037 FORWARD LENGTH=220
Length = 220
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/173 (46%), Positives = 109/173 (63%), Gaps = 2/173 (1%)
Query: 87 AIKLSCGHLEDISIEDFCTNKILKDIADSGSHLRRLRLLKCEKMYDKGLSVVVKNLPMLE 146
A+ LS G +I+IE F T+ +L IAD S+LR L L KC+++ GL LP+LE
Sbjct: 32 AVALSQGGCVEINIEHFGTDSLLTYIADRSSNLRHLGLAKCDQITGMGLFTEAMKLPLLE 91
Query: 147 EFEISFGDLSTYNLEVLGKCCPYLEVLKFNKKENK--EYQCDDEAFAIAKTMPRLRHLQL 204
+ E+S+ + NLE +G C +L+ LK N + K + D +A IAK MP LR LQL
Sbjct: 92 DLELSYCLIKGKNLEAIGFACLHLKTLKLNCQGFKFPGFTYDHDALGIAKRMPELRCLQL 151
Query: 205 LGNRLTNQGLLAILDGCPCLESLDLRVCSNVDLSGSLRERCWKQIRDLRFPED 257
GNR+++ GL AI DGCP LE LDLR C N++L G L +RC ++I+DLR P D
Sbjct: 152 FGNRVSDVGLNAIFDGCPHLEHLDLRQCFNINLVGDLEKRCMERIKDLRRPND 204
>AT5G52480.1 | Symbols: | RNI-like superfamily protein |
chr5:21296918-21297762 REVERSE LENGTH=241
Length = 241
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 113/177 (63%), Gaps = 4/177 (2%)
Query: 82 GFCRLAIKLSCGHLEDISIEDFCTNKILKDIADSGSHLRRLRLLKCEKMYDKGLSVVVKN 141
CR A+ S G L +I+I DF ++ +L IA+ S+LR LRL+ C ++ D G V
Sbjct: 17 AICRNAVDRSEGGLLEINIGDFGSDSLLTYIAERSSNLRSLRLM-CSEITDDGFVQAVVK 75
Query: 142 LPMLEEFEISFGDLSTYNLEVLGKCCPYLEVLKFNKKEN-KEYQCDDEAFAIAKTMPRLR 200
LPMLEE E+S LS ++++ G CP L+ L N+ D +A AIA++MP+LR
Sbjct: 76 LPMLEELEVSGISLSGESMKLAGLSCPNLKTLMLNRLFYLSSDDDDHDAIAIAESMPKLR 135
Query: 201 HLQLLGNRLTNQGLLAILDGCPCLESLDLRVCSNVDLSGSLRERCWKQIRDLRFPED 257
HLQL GN+LT GL AILDGCP LE LDLR C ++L G+L +RC+++I+DLR D
Sbjct: 136 HLQLCGNKLTKTGLNAILDGCPHLEHLDLRQC--INLVGNLEKRCFEKIKDLRRHND 190
>AT5G52480.2 | Symbols: | RNI-like superfamily protein |
chr5:21296918-21297529 REVERSE LENGTH=203
Length = 203
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/152 (46%), Positives = 95/152 (62%), Gaps = 4/152 (2%)
Query: 107 KILKDIADSGSHLRRLRLLKCEKMYDKGLSVVVKNLPMLEEFEISFGDLSTYNLEVLGKC 166
L I S+LR LRL+ C ++ D G V LPMLEE E+S LS ++++ G
Sbjct: 4 NFLHTITCRSSNLRSLRLM-CSEITDDGFVQAVVKLPMLEELEVSGISLSGESMKLAGLS 62
Query: 167 CPYLEVLKFNKKEN-KEYQCDDEAFAIAKTMPRLRHLQLLGNRLTNQGLLAILDGCPCLE 225
CP L+ L N+ D +A AIA++MP+LRHLQL GN+LT GL AILDGCP LE
Sbjct: 63 CPNLKTLMLNRLFYLSSDDDDHDAIAIAESMPKLRHLQLCGNKLTKTGLNAILDGCPHLE 122
Query: 226 SLDLRVCSNVDLSGSLRERCWKQIRDLRFPED 257
LDLR C ++L G+L +RC+++I+DLR D
Sbjct: 123 HLDLRQC--INLVGNLEKRCFEKIKDLRRHND 152
>AT5G57900.1 | Symbols: SKIP1 | SKP1 interacting partner 1 |
chr5:23449916-23450915 REVERSE LENGTH=300
Length = 300
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 118/258 (45%), Gaps = 33/258 (12%)
Query: 20 GPNWLELPREVTAKILHKLSPFEILNGASPVCPLWWEICKDPIMWRTIDMTNP--PPYPH 77
G +W L E+ I+ +L+ E+ G V W +C+DP +W D+ P YP
Sbjct: 5 GSDWGGLAPEILINIISRLTIQELWTGPMFVQKSWLTVCRDPYLWSIFDL-EPWFDSYPE 63
Query: 78 S----------KLVGFCRLAIKLSCGHLEDISIEDFCTNKILKDIADSGSHLRRLRLLKC 127
S K+ R + S G L I + C++ L AD +L+ L +
Sbjct: 64 STHLWSPEFEQKVDLMLRSVVDWSEGGLTKIRVR-HCSDHALSYAADRCPNLQVLAIRSS 122
Query: 128 EKMYDKGLSVVVKNLPMLEEFEISF-GDLSTYNLEVLGKCCPYLEVLKFNKKE------- 179
+ D ++ + L+E +IS+ ++S L ++G+ CP L +LK N +
Sbjct: 123 PNVTDASMTKIAFRCRSLKELDISYCHEISHDTLVMIGRNCPNLRILKRNLMDWSSRHIG 182
Query: 180 --NKEY------QCDDEAFAIAKTMPRLRHLQLLGNRLTNQGLLAILDGCPCLESLDLRV 231
EY D EA AI K M L HL++ +RL+ +GL +I +GCP LE LDL
Sbjct: 183 SVPTEYLDACPQDGDTEADAIGKHMINLEHLEIQFSRLSVKGLASICEGCPKLEYLDLFG 242
Query: 232 C---SNVDLSGSLRERCW 246
C S+ D++ ++ W
Sbjct: 243 CVHLSSRDITSNVSRLKW 260
>AT4G30640.1 | Symbols: | RNI-like superfamily protein |
chr4:14952670-14953682 FORWARD LENGTH=301
Length = 301
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 111/259 (42%), Gaps = 30/259 (11%)
Query: 9 AEKKAKGESTLGPNWLELPREVTAKILHKLSPFEILNGASPVCPLWWEICKDPIMWRTID 68
E K + S L P+W EL RE I +LS + G V W C DP + D
Sbjct: 6 GEGKVEMGSGLYPDWSELTRECLLDIFSRLSQEQRWIGPMLVSKNWMNACYDPTLNTIFD 65
Query: 69 M-TNPPPYPHS----------KLVGFCRLAIKLSCGHLEDISIEDFCTNKILKDIADSGS 117
+ T +P S K+ F R + S G L +I I CT + L A+
Sbjct: 66 LETRFLSFPESINWWTPEFEDKVDSFLRSVVDRSEGGLTEIRIR-HCTERSLSYAAERCP 124
Query: 118 HLRRLRLLKCEKMYDKGLSVVVKNLPMLEEFEISFG-DLSTYNLEVLGKCCPYLEVLKFN 176
+L L + C + D + + N P L E +IS+ ++ +L LG+ C L++LK N
Sbjct: 125 NLEVLWIKNCPNVTDASMEKIAMNCPNLRELDISYSYGITHESLITLGRSCQNLKILKRN 184
Query: 177 -----------------KKENKEYQCDDEAFAIAKTMPRLRHLQLLGNRLTNQGLLAILD 219
+ EA I K M +L+HL++ + LT +GL ++
Sbjct: 185 LLPRLGPSLPTIVAPLDYLATFPRYGNIEARIIGKYMTQLKHLEIRYSTLTARGLDSVCK 244
Query: 220 GCPCLESLDLRVCSNVDLS 238
GC LE +DLR C ++ S
Sbjct: 245 GCSNLEYMDLRGCISLTRS 263
>AT4G08980.5 | Symbols: FBW2 | F-BOX WITH WD-40 2 |
chr4:5758993-5760108 FORWARD LENGTH=317
Length = 317
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 98/226 (43%), Gaps = 7/226 (3%)
Query: 22 NWLELPREVTAKILHKLSPFEILNGASPVCPLWWEICKDPIMWRTIDMTNPPPYPHSK-- 79
+W EL + I L E+L VC W P W+ ID+ H
Sbjct: 9 HWDELIPDALGLIFSHLPLQEVLTVVPRVCKAWNRAVTGPYCWQEIDIELWSNRFHQSDH 68
Query: 80 LVGFCRLAIKLSCGHLEDISIEDFCTNKILKDIADSGSHLRRLRLLKCEKMYDKGLSVVV 139
L + I S G L +S+ + I IA L+ L++ + + + G+ V
Sbjct: 69 LDRMLEMLIPRSAGSLRKLSVTGLRNDSIFSFIAQHAGSLKTLKVPR-SGLTNSGVVNVA 127
Query: 140 KNLPMLEEFEISFG-DLSTYNLEVLGKCCPYLEVLKFNKKE---NKEYQCDDEAFAIAKT 195
+ L L ++S+ + ++ +GK C L N DDEA+AIA T
Sbjct: 128 EKLSSLTFLDLSYCCKIGPEAIQAIGKHCKSLREFCRNMHPLDVASVVSHDDEAYAIANT 187
Query: 196 MPRLRHLQLLGNRLTNQGLLAILDGCPCLESLDLRVCSNVDLSGSL 241
MP+L+ L++ +R++ +G+L IL C LE L+LR C +V L
Sbjct: 188 MPKLKRLEIAYHRVSTEGVLKILSCCVFLEFLELRGCWDVQLDNKF 233
>AT4G08980.4 | Symbols: FBW2 | F-BOX WITH WD-40 2 |
chr4:5758993-5760108 FORWARD LENGTH=317
Length = 317
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 98/226 (43%), Gaps = 7/226 (3%)
Query: 22 NWLELPREVTAKILHKLSPFEILNGASPVCPLWWEICKDPIMWRTIDMTNPPPYPHSK-- 79
+W EL + I L E+L VC W P W+ ID+ H
Sbjct: 9 HWDELIPDALGLIFSHLPLQEVLTVVPRVCKAWNRAVTGPYCWQEIDIELWSNRFHQSDH 68
Query: 80 LVGFCRLAIKLSCGHLEDISIEDFCTNKILKDIADSGSHLRRLRLLKCEKMYDKGLSVVV 139
L + I S G L +S+ + I IA L+ L++ + + + G+ V
Sbjct: 69 LDRMLEMLIPRSAGSLRKLSVTGLRNDSIFSFIAQHAGSLKTLKVPR-SGLTNSGVVNVA 127
Query: 140 KNLPMLEEFEISFG-DLSTYNLEVLGKCCPYLEVLKFNKKE---NKEYQCDDEAFAIAKT 195
+ L L ++S+ + ++ +GK C L N DDEA+AIA T
Sbjct: 128 EKLSSLTFLDLSYCCKIGPEAIQAIGKHCKSLREFCRNMHPLDVASVVSHDDEAYAIANT 187
Query: 196 MPRLRHLQLLGNRLTNQGLLAILDGCPCLESLDLRVCSNVDLSGSL 241
MP+L+ L++ +R++ +G+L IL C LE L+LR C +V L
Sbjct: 188 MPKLKRLEIAYHRVSTEGVLKILSCCVFLEFLELRGCWDVQLDNKF 233
>AT4G08980.2 | Symbols: FBW2 | F-BOX WITH WD-40 2 |
chr4:5758993-5760108 FORWARD LENGTH=317
Length = 317
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 98/226 (43%), Gaps = 7/226 (3%)
Query: 22 NWLELPREVTAKILHKLSPFEILNGASPVCPLWWEICKDPIMWRTIDMTNPPPYPHSK-- 79
+W EL + I L E+L VC W P W+ ID+ H
Sbjct: 9 HWDELIPDALGLIFSHLPLQEVLTVVPRVCKAWNRAVTGPYCWQEIDIELWSNRFHQSDH 68
Query: 80 LVGFCRLAIKLSCGHLEDISIEDFCTNKILKDIADSGSHLRRLRLLKCEKMYDKGLSVVV 139
L + I S G L +S+ + I IA L+ L++ + + + G+ V
Sbjct: 69 LDRMLEMLIPRSAGSLRKLSVTGLRNDSIFSFIAQHAGSLKTLKVPR-SGLTNSGVVNVA 127
Query: 140 KNLPMLEEFEISFG-DLSTYNLEVLGKCCPYLEVLKFNKKE---NKEYQCDDEAFAIAKT 195
+ L L ++S+ + ++ +GK C L N DDEA+AIA T
Sbjct: 128 EKLSSLTFLDLSYCCKIGPEAIQAIGKHCKSLREFCRNMHPLDVASVVSHDDEAYAIANT 187
Query: 196 MPRLRHLQLLGNRLTNQGLLAILDGCPCLESLDLRVCSNVDLSGSL 241
MP+L+ L++ +R++ +G+L IL C LE L+LR C +V L
Sbjct: 188 MPKLKRLEIAYHRVSTEGVLKILSCCVFLEFLELRGCWDVQLDNKF 233
>AT4G08980.3 | Symbols: FBW2 | F-BOX WITH WD-40 2 |
chr4:5758993-5760108 FORWARD LENGTH=317
Length = 317
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 98/226 (43%), Gaps = 7/226 (3%)
Query: 22 NWLELPREVTAKILHKLSPFEILNGASPVCPLWWEICKDPIMWRTIDMTNPPPYPHSK-- 79
+W EL + I L E+L VC W P W+ ID+ H
Sbjct: 9 HWDELIPDALGLIFSHLPLQEVLTVVPRVCKAWNRAVTGPYCWQEIDIELWSNRFHQSDH 68
Query: 80 LVGFCRLAIKLSCGHLEDISIEDFCTNKILKDIADSGSHLRRLRLLKCEKMYDKGLSVVV 139
L + I S G L +S+ + I IA L+ L++ + + + G+ V
Sbjct: 69 LDRMLEMLIPRSAGSLRKLSVTGLRNDSIFSFIAQHAGSLKTLKVPR-SGLTNSGVVNVA 127
Query: 140 KNLPMLEEFEISFG-DLSTYNLEVLGKCCPYLEVLKFNKKE---NKEYQCDDEAFAIAKT 195
+ L L ++S+ + ++ +GK C L N DDEA+AIA T
Sbjct: 128 EKLSSLTFLDLSYCCKIGPEAIQAIGKHCKSLREFCRNMHPLDVASVVSHDDEAYAIANT 187
Query: 196 MPRLRHLQLLGNRLTNQGLLAILDGCPCLESLDLRVCSNVDLSGSL 241
MP+L+ L++ +R++ +G+L IL C LE L+LR C +V L
Sbjct: 188 MPKLKRLEIAYHRVSTEGVLKILSCCVFLEFLELRGCWDVQLDNKF 233
>AT4G08980.1 | Symbols: FBW2 | F-BOX WITH WD-40 2 |
chr4:5758993-5760108 FORWARD LENGTH=317
Length = 317
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 98/226 (43%), Gaps = 7/226 (3%)
Query: 22 NWLELPREVTAKILHKLSPFEILNGASPVCPLWWEICKDPIMWRTIDMTNPPPYPHSK-- 79
+W EL + I L E+L VC W P W+ ID+ H
Sbjct: 9 HWDELIPDALGLIFSHLPLQEVLTVVPRVCKAWNRAVTGPYCWQEIDIELWSNRFHQSDH 68
Query: 80 LVGFCRLAIKLSCGHLEDISIEDFCTNKILKDIADSGSHLRRLRLLKCEKMYDKGLSVVV 139
L + I S G L +S+ + I IA L+ L++ + + + G+ V
Sbjct: 69 LDRMLEMLIPRSAGSLRKLSVTGLRNDSIFSFIAQHAGSLKTLKVPR-SGLTNSGVVNVA 127
Query: 140 KNLPMLEEFEISFG-DLSTYNLEVLGKCCPYLEVLKFNKKE---NKEYQCDDEAFAIAKT 195
+ L L ++S+ + ++ +GK C L N DDEA+AIA T
Sbjct: 128 EKLSSLTFLDLSYCCKIGPEAIQAIGKHCKSLREFCRNMHPLDVASVVSHDDEAYAIANT 187
Query: 196 MPRLRHLQLLGNRLTNQGLLAILDGCPCLESLDLRVCSNVDLSGSL 241
MP+L+ L++ +R++ +G+L IL C LE L+LR C +V L
Sbjct: 188 MPKLKRLEIAYHRVSTEGVLKILSCCVFLEFLELRGCWDVQLDNKF 233
>AT3G48880.2 | Symbols: | RNI-like superfamily protein |
chr3:18127873-18129008 FORWARD LENGTH=309
Length = 309
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 102/241 (42%), Gaps = 22/241 (9%)
Query: 16 ESTLGPNWLELPREVTAKILHKLSPFEILNGASPVCPLWWEICKDPIMWRTIDMTNP--- 72
ES W EL ++ +I K S FE+ +G + VC W C DPI+W+T+D++N
Sbjct: 6 ESRRLRRWEELDTDILVRIFQKFSVFELTSGLAHVCRGWRAACCDPILWKTVDLSNMRSS 65
Query: 73 ------PPYPHSK------LVGFCRLAIKLSCGHLEDI--SIEDFCTNKILKDIADSGSH 118
PY + + L +L++ LS G + F ++ L A+
Sbjct: 66 FIKIPLEPYVYVERRSDEALTRILKLSMNLSGGSTRTLIFHFNLFLSDDQLTYTAERCPG 125
Query: 119 LRRLRLLKCEKMYDKGLSVVVKNLPMLEEFEISFGDLSTYNLEVLGKCCPYLEVLKFNKK 178
LRR+ L ++ G+ ++ LE + Y L + K C + LK
Sbjct: 126 LRRVVLPAWNRIKKTGICKAIRIWKDLESLTMPSIANPPYLLTEIAKNCKNFKELKIMGP 185
Query: 179 ENKEYQCDDEAFAIAKTMPRLRHLQLLGNRLTNQGLLAILDGCPCLESLDLRVCSNVDLS 238
+ A + +P ++ L + + + + L+ ILDG P LE L++ V+ S
Sbjct: 186 FEVFF-----ANTLITCLPNIKTLSIRCSAIKREALMKILDGLPSLEVLNISHSHLVEYS 240
Query: 239 G 239
G
Sbjct: 241 G 241
>AT3G48880.1 | Symbols: | RNI-like superfamily protein |
chr3:18127873-18129008 FORWARD LENGTH=309
Length = 309
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 102/241 (42%), Gaps = 22/241 (9%)
Query: 16 ESTLGPNWLELPREVTAKILHKLSPFEILNGASPVCPLWWEICKDPIMWRTIDMTNP--- 72
ES W EL ++ +I K S FE+ +G + VC W C DPI+W+T+D++N
Sbjct: 6 ESRRLRRWEELDTDILVRIFQKFSVFELTSGLAHVCRGWRAACCDPILWKTVDLSNMRSS 65
Query: 73 ------PPYPHSK------LVGFCRLAIKLSCGHLEDI--SIEDFCTNKILKDIADSGSH 118
PY + + L +L++ LS G + F ++ L A+
Sbjct: 66 FIKIPLEPYVYVERRSDEALTRILKLSMNLSGGSTRTLIFHFNLFLSDDQLTYTAERCPG 125
Query: 119 LRRLRLLKCEKMYDKGLSVVVKNLPMLEEFEISFGDLSTYNLEVLGKCCPYLEVLKFNKK 178
LRR+ L ++ G+ ++ LE + Y L + K C + LK
Sbjct: 126 LRRVVLPAWNRIKKTGICKAIRIWKDLESLTMPSIANPPYLLTEIAKNCKNFKELKIMGP 185
Query: 179 ENKEYQCDDEAFAIAKTMPRLRHLQLLGNRLTNQGLLAILDGCPCLESLDLRVCSNVDLS 238
+ A + +P ++ L + + + + L+ ILDG P LE L++ V+ S
Sbjct: 186 FEVFF-----ANTLITCLPNIKTLSIRCSAIKREALMKILDGLPSLEVLNISHSHLVEYS 240
Query: 239 G 239
G
Sbjct: 241 G 241
>AT5G23340.1 | Symbols: | RNI-like superfamily protein |
chr5:7856314-7857983 FORWARD LENGTH=405
Length = 405
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 7/154 (4%)
Query: 105 TNKILKDIADSGSHLRRLRLLKCEKMYDKGLSVVVKNLPMLEEFEISF-GDLSTYNLEVL 163
T+ L I++ LR L L C+ + D GL+ + + L +L+ ++S+ LS L +
Sbjct: 86 TDSDLAVISEGFKFLRVLNLHNCKGITDTGLASIGRCLSLLQFLDVSYCRKLSDKGLSAV 145
Query: 164 GKCCPYLEVLKFNKKENKEYQCDDEAFAIAKTMPRLRHLQLLG-NRLTNQGLLAILDGCP 222
+ C L L + D+ ++++ L L L G +T+ GL ++ GC
Sbjct: 146 AEGCHDLRALHL---AGCRFITDESLKSLSERCRDLEALGLQGCTNITDSGLADLVKGCR 202
Query: 223 CLESLDLRVCSNVDLSG--SLRERCWKQIRDLRF 254
++SLD+ CSNV +G S+ + C ++ L+
Sbjct: 203 KIKSLDINKCSNVGDAGVSSVAKACASSLKTLKL 236
>AT5G27920.1 | Symbols: | F-box family protein |
chr5:9942063-9944507 REVERSE LENGTH=642
Length = 642
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 16/130 (12%)
Query: 117 SHLRRLRLLKCEKMYDKGLSVVVKNLPMLEEFEI----SFGDLSTYNLEVLGKCCPYLEV 172
S+L+RL+L C + DKG+ + L E ++ FGD L L + C L
Sbjct: 428 SNLQRLKLGLCTNISDKGIFHIGSKCSKLLELDLYRCAGFGD---DGLAALSRGCKSLNR 484
Query: 173 LKFNKKENKEYQCD--DEAFAIAKTMPRLRHLQLLG-NRLTNQGLLAILDGCPCLESLDL 229
L + Y C+ D + + L HL+L G +T GL AI GC L LD+
Sbjct: 485 LILS------YCCELTDTGVEQIRQLELLSHLELRGLKNITGVGLAAIASGCKKLGYLDV 538
Query: 230 RVCSNVDLSG 239
++C N+D SG
Sbjct: 539 KLCENIDDSG 548