Miyakogusa Predicted Gene
- Lj0g3v0300769.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0300769.1 Non Chatacterized Hit- tr|I1LZ38|I1LZ38_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,69.03,0,The
RING-variant domain is a C4HC3 zinc-fing,Zinc finger, RING-CH-type;
ZF_RING_CH,Zinc finger,
RING,NODE_17437_length_1372_cov_13.585277.path1.1
(389 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G09760.1 | Symbols: | RING/U-box superfamily protein | chr3:... 271 5e-73
AT5G03180.2 | Symbols: | RING/U-box superfamily protein | chr5:... 232 3e-61
AT5G03180.1 | Symbols: | RING/U-box superfamily protein | chr5:... 229 2e-60
AT5G60580.4 | Symbols: | RING/U-box superfamily protein | chr5:... 222 4e-58
AT5G60580.2 | Symbols: | RING/U-box superfamily protein | chr5:... 222 4e-58
AT5G60580.3 | Symbols: | RING/U-box superfamily protein | chr5:... 222 4e-58
AT5G60580.1 | Symbols: | RING/U-box superfamily protein | chr5:... 222 4e-58
AT5G18760.1 | Symbols: | RING/U-box superfamily protein | chr5:... 121 1e-27
AT3G06330.3 | Symbols: | RING/U-box superfamily protein | chr3:... 117 1e-26
AT3G06330.1 | Symbols: | RING/U-box superfamily protein | chr3:... 116 2e-26
AT3G06330.2 | Symbols: | RING/U-box superfamily protein | chr3:... 113 2e-25
AT2G37950.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 64 2e-10
AT5G01070.2 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 59 7e-09
AT5G59000.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 58 1e-08
AT5G05830.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 58 1e-08
AT1G14260.2 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 57 2e-08
AT1G14260.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 57 2e-08
AT5G38070.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 55 1e-07
AT2G34200.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 52 5e-07
AT1G02610.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 52 7e-07
AT4G34100.1 | Symbols: | RING/U-box superfamily protein | chr4:... 52 8e-07
AT4G34100.2 | Symbols: | RING/U-box superfamily protein | chr4:... 52 9e-07
AT5G63780.1 | Symbols: SHA1 | RING/FYVE/PHD zinc finger superfam... 50 3e-06
AT2G01275.2 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 49 6e-06
AT2G01275.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 49 6e-06
AT5G08750.2 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 49 8e-06
AT5G08750.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 49 8e-06
AT5G08750.3 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 48 9e-06
AT3G47550.6 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 48 1e-05
AT3G47550.3 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 48 1e-05
>AT3G09760.1 | Symbols: | RING/U-box superfamily protein |
chr3:2992975-2995451 REVERSE LENGTH=491
Length = 491
Score = 271 bits (694), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 170/376 (45%), Positives = 221/376 (58%), Gaps = 43/376 (11%)
Query: 28 IQKDLVSPEITE--ELTS-GQYETRPNIILEIPTITQEEA-REDYLRIDIPPTPSP--RR 81
+Q+D S EI + EL+S G+ R ++L++P+ T E+ R+D R + T SP +R
Sbjct: 23 LQRDGNSAEIAQGQELSSPGRDLWRRGLVLDLPSTTPEDTTRDDLFRRNASLTSSPVAKR 82
Query: 82 VIFPPCLSPGFSRANEXXXXXXXXXX------XTIKTFLPKLSFKFLNTSSD---IEKAA 132
V F P SP + ++K +PKLSFK N+++D IEKAA
Sbjct: 83 VNFSPMSSPRVGQRGASLSPSSSTSSSSRNKPNSLKNLIPKLSFKNRNSNNDNVDIEKAA 142
Query: 133 FLAL-------EGSAPKKPFXXXXXXXXXXXXXXXPGTPIAHSHPGSLHGGNMAYLATTV 185
L G P TPIAHS+P S HG L T+
Sbjct: 143 DLGFVSSPSSGNGRDRSTWTLTNILTPRLKKTESLPVTPIAHSNPESTHGRFAVDLVTST 202
Query: 186 EKGVQLPIHRSRSVPSFTEEGNTTPVGAKFRVIPTTPRIDEKIATTTSTKSPTDDAVE-- 243
+KG LPIHRSRSVP+F ++G+ +G FRVIPT P + SPT + ++
Sbjct: 203 KKGPPLPIHRSRSVPAFNKDGSQRQLGV-FRVIPT-PNM-----------SPTRNTIKLN 249
Query: 244 --NEDGGEDIPEEEAVCRICMVELGEGANTFKLECSCKGELSLAHQECAVKWFRIKGNRT 301
N DG ED+PEEEAVCRIC+VELGE + FK+EC C+GEL+LAH+EC +KWF IKGNRT
Sbjct: 250 DANVDGAEDVPEEEAVCRICLVELGEDSEAFKMECLCRGELALAHKECTIKWFTIKGNRT 309
Query: 302 CDVCKQEVKNLPVTLLRVQTVLGSRGQ-LAETSQYRVLQDAPILVIVNMLAYFCFLEQLL 360
CDVCKQEV+NLPVTLLR+Q GS G AE + Y + QD PILVIV+MLAYFCFLEQLL
Sbjct: 310 CDVCKQEVQNLPVTLLRMQNSRGSIGAPDAEAAHYSLWQDVPILVIVSMLAYFCFLEQLL 369
Query: 361 VS---SASLVDSIPFS 373
++ S ++ S+PFS
Sbjct: 370 LTKMQSGAIAVSLPFS 385
>AT5G03180.2 | Symbols: | RING/U-box superfamily protein |
chr5:754201-756411 REVERSE LENGTH=466
Length = 466
Score = 232 bits (591), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 148/353 (41%), Positives = 197/353 (55%), Gaps = 23/353 (6%)
Query: 34 SPEITEELTSGQYETRPNIILEIPTITQEEAREDYLRID--IPPTPSPRRVIFPPCLSPG 91
S EITE L+ Q++ ++L+I + EA D+LR + + +P +R F P SP
Sbjct: 30 STEITEMLSPSQHQRWRGLVLDIQS---REAHGDFLRANGSLIHSPVSKRFKFSPMSSPR 86
Query: 92 FSRANEXXXXXXXXXXXTIKTFLPKLSFKFLNTSSDIEKAAFLALEGSAPKK--PFXXXX 149
R K +FK N S+DIE+ L + K P
Sbjct: 87 TGRRVGSMSPSSSRNRTNQK------NFKNRNHSADIEEGVVSPLGDGSDKSYIPRTWSL 140
Query: 150 XXXXXXXXXXXPGTPIAHSHPGSLHGGNMAYL--ATTVEKGVQLPIHRSRSVPSFTEEGN 207
+ I HS+P S++G + T+++ LPI R+RSVP+F +
Sbjct: 141 TNLLAPRKSKKTESFITHSNPESMNGRYAVEVDPVTSMKGERLLPIRRTRSVPTFFNKDG 200
Query: 208 TTPVGAKFRVIPTTPRIDEKIATTTSTKSPTDDAVENEDGGEDIPEEEAVCRICMVELGE 267
+ + FRVIPT R DEK T + EN+DGGED+PEEEAVCRICMVE+ E
Sbjct: 201 SVKPSSVFRVIPTPSRGDEKRLEMTQASKLSKLHDENDDGGEDVPEEEAVCRICMVEMEE 260
Query: 268 GANTFKLECSCKGELSLAHQECAVKWFRIKGNRTCDVCKQEVKNLPVTLLRVQTVLGSRG 327
FK+EC CKGEL+LAH+ C +KWF IKGN TCDVCKQEV+NLPVTLLRVQ +R
Sbjct: 261 DEEAFKMECMCKGELALAHKTCTIKWFTIKGNITCDVCKQEVRNLPVTLLRVQDS-QNRS 319
Query: 328 QLA---ETSQY-RVLQDAPILVIVNMLAYFCFLEQLLV---SSASLVDSIPFS 373
+ A E S++ V QD PILVIV+MLAYFCFLEQLL+ S+++ ++PFS
Sbjct: 320 RAARDIEISRFNNVWQDIPILVIVSMLAYFCFLEQLLIIDMKSSAVAIALPFS 372
>AT5G03180.1 | Symbols: | RING/U-box superfamily protein |
chr5:754201-756411 REVERSE LENGTH=462
Length = 462
Score = 229 bits (584), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 148/353 (41%), Positives = 196/353 (55%), Gaps = 27/353 (7%)
Query: 34 SPEITEELTSGQYETRPNIILEIPTITQEEAREDYLRID--IPPTPSPRRVIFPPCLSPG 91
S EITE L+ Q++ ++L+I + EA D+LR + + +P +R F P SP
Sbjct: 30 STEITEMLSPSQHQRWRGLVLDIQS---REAHGDFLRANGSLIHSPVSKRFKFSPMSSPR 86
Query: 92 FSRANEXXXXXXXXXXXTIKTFLPKLSFKFLNTSSDIEKAAFLALEGSAPKK--PFXXXX 149
R K +FK N S+DIE+ L + K P
Sbjct: 87 TGRRVGSMSPSSSRNRTNQK------NFKNRNHSADIEEGVVSPLGDGSDKSYIPRTWSL 140
Query: 150 XXXXXXXXXXXPGTPIAHSHPGSLHGGNMAYL--ATTVEKGVQLPIHRSRSVPSFTEEGN 207
+ I HS+P S++G + T+++ LPI R+RSVP+F +
Sbjct: 141 TNLLAPRKSKKTESFITHSNPESMNGRYAVEVDPVTSMKGERLLPIRRTRSVPTFFNKDG 200
Query: 208 TTPVGAKFRVIPTTPRIDEKIATTTSTKSPTDDAVENEDGGEDIPEEEAVCRICMVELGE 267
+ + FRVIPT R DEK T EN+DGGED+PEEEAVCRICMVE+ E
Sbjct: 201 SVKPSSVFRVIPTPSRGDEKRLEMTQASKLN----ENDDGGEDVPEEEAVCRICMVEMEE 256
Query: 268 GANTFKLECSCKGELSLAHQECAVKWFRIKGNRTCDVCKQEVKNLPVTLLRVQTVLGSRG 327
FK+EC CKGEL+LAH+ C +KWF IKGN TCDVCKQEV+NLPVTLLRVQ +R
Sbjct: 257 DEEAFKMECMCKGELALAHKTCTIKWFTIKGNITCDVCKQEVRNLPVTLLRVQDS-QNRS 315
Query: 328 QLA---ETSQY-RVLQDAPILVIVNMLAYFCFLEQLLV---SSASLVDSIPFS 373
+ A E S++ V QD PILVIV+MLAYFCFLEQLL+ S+++ ++PFS
Sbjct: 316 RAARDIEISRFNNVWQDIPILVIVSMLAYFCFLEQLLIIDMKSSAVAIALPFS 368
>AT5G60580.4 | Symbols: | RING/U-box superfamily protein |
chr5:24354298-24356706 FORWARD LENGTH=494
Length = 494
Score = 222 bits (565), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 147/356 (41%), Positives = 196/356 (55%), Gaps = 24/356 (6%)
Query: 34 SPEITEELTSG-QYETRPNIILEIPTITQEEAREDYLRIDIPPTPSPRRVIFPPCLSPGF 92
S ITE+ ++ Q R N+ L+IP+ + ED + I +PPTPSP L+
Sbjct: 28 SSAITEDTSANVQQWRRKNLSLQIPSRAAGLSPEDSVVIKMPPTPSPTPRRVNFALTSSS 87
Query: 93 SRANEXXXXXXXXXXXTIKTFLPKLSFKFLNTSSDIEKAAFLALEGSAPKKPFXXXXXXX 152
++K LPK K +++DIEK +G+A P
Sbjct: 88 PGPTPTSSSVLPRGKSSLKNLLPKAGCKPKTSNTDIEKG-----QGNACSPPASQEKASI 142
Query: 153 XXXXX------------XXXPGTPIAHSHPGSLHGGNMAYLATTVEKGVQLPIHRSRSVP 200
P TP+ S+ S HGG T KG + I RSRSVP
Sbjct: 143 SRSLSLSKLFTPRIKRTSSLPVTPVILSNSESAHGGTSVAPQTPNRKG-SVHIARSRSVP 201
Query: 201 SFTEEGNTTPVGAKFRVIPTTPRIDEKIATTTSTKSPTDDAVENEDGGEDIPEEEAVCRI 260
+E + + + FRVIP+TPR+ E S S + + GEDIPE+EAVCRI
Sbjct: 202 LNDKELSLKGMDSFFRVIPSTPRVKE--GDVFSNASEAGNTETGDADGEDIPEDEAVCRI 259
Query: 261 CMVELGEGANTFKLECSCKGELSLAHQECAVKWFRIKGNRTCDVCKQEVKNLPVTLLRVQ 320
C+VEL EG T K+ECSCKGEL+LAH++CA+KWF IKGN+TC+VCKQEVKNLPVTLLR+Q
Sbjct: 260 CLVELCEGGETLKMECSCKGELALAHKDCALKWFTIKGNKTCEVCKQEVKNLPVTLLRIQ 319
Query: 321 TVLGSRGQLAETSQYRVLQDAPILVIVNMLAYFCFLEQLLV---SSASLVDSIPFS 373
++ S + S YRV Q+ P+LVI++MLAYFCFLEQLLV + ++ S+PFS
Sbjct: 320 SLRNSGVPQLDVSGYRVWQEVPVLVIISMLAYFCFLEQLLVENMGTGAIAISLPFS 375
>AT5G60580.2 | Symbols: | RING/U-box superfamily protein |
chr5:24354298-24356706 FORWARD LENGTH=494
Length = 494
Score = 222 bits (565), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 147/356 (41%), Positives = 196/356 (55%), Gaps = 24/356 (6%)
Query: 34 SPEITEELTSG-QYETRPNIILEIPTITQEEAREDYLRIDIPPTPSPRRVIFPPCLSPGF 92
S ITE+ ++ Q R N+ L+IP+ + ED + I +PPTPSP L+
Sbjct: 28 SSAITEDTSANVQQWRRKNLSLQIPSRAAGLSPEDSVVIKMPPTPSPTPRRVNFALTSSS 87
Query: 93 SRANEXXXXXXXXXXXTIKTFLPKLSFKFLNTSSDIEKAAFLALEGSAPKKPFXXXXXXX 152
++K LPK K +++DIEK +G+A P
Sbjct: 88 PGPTPTSSSVLPRGKSSLKNLLPKAGCKPKTSNTDIEKG-----QGNACSPPASQEKASI 142
Query: 153 XXXXX------------XXXPGTPIAHSHPGSLHGGNMAYLATTVEKGVQLPIHRSRSVP 200
P TP+ S+ S HGG T KG + I RSRSVP
Sbjct: 143 SRSLSLSKLFTPRIKRTSSLPVTPVILSNSESAHGGTSVAPQTPNRKG-SVHIARSRSVP 201
Query: 201 SFTEEGNTTPVGAKFRVIPTTPRIDEKIATTTSTKSPTDDAVENEDGGEDIPEEEAVCRI 260
+E + + + FRVIP+TPR+ E S S + + GEDIPE+EAVCRI
Sbjct: 202 LNDKELSLKGMDSFFRVIPSTPRVKE--GDVFSNASEAGNTETGDADGEDIPEDEAVCRI 259
Query: 261 CMVELGEGANTFKLECSCKGELSLAHQECAVKWFRIKGNRTCDVCKQEVKNLPVTLLRVQ 320
C+VEL EG T K+ECSCKGEL+LAH++CA+KWF IKGN+TC+VCKQEVKNLPVTLLR+Q
Sbjct: 260 CLVELCEGGETLKMECSCKGELALAHKDCALKWFTIKGNKTCEVCKQEVKNLPVTLLRIQ 319
Query: 321 TVLGSRGQLAETSQYRVLQDAPILVIVNMLAYFCFLEQLLV---SSASLVDSIPFS 373
++ S + S YRV Q+ P+LVI++MLAYFCFLEQLLV + ++ S+PFS
Sbjct: 320 SLRNSGVPQLDVSGYRVWQEVPVLVIISMLAYFCFLEQLLVENMGTGAIAISLPFS 375
>AT5G60580.3 | Symbols: | RING/U-box superfamily protein |
chr5:24354298-24356706 FORWARD LENGTH=487
Length = 487
Score = 222 bits (565), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 147/356 (41%), Positives = 196/356 (55%), Gaps = 24/356 (6%)
Query: 34 SPEITEELTSG-QYETRPNIILEIPTITQEEAREDYLRIDIPPTPSPRRVIFPPCLSPGF 92
S ITE+ ++ Q R N+ L+IP+ + ED + I +PPTPSP L+
Sbjct: 28 SSAITEDTSANVQQWRRKNLSLQIPSRAAGLSPEDSVVIKMPPTPSPTPRRVNFALTSSS 87
Query: 93 SRANEXXXXXXXXXXXTIKTFLPKLSFKFLNTSSDIEKAAFLALEGSAPKKPFXXXXXXX 152
++K LPK K +++DIEK +G+A P
Sbjct: 88 PGPTPTSSSVLPRGKSSLKNLLPKAGCKPKTSNTDIEKG-----QGNACSPPASQEKASI 142
Query: 153 XXXXX------------XXXPGTPIAHSHPGSLHGGNMAYLATTVEKGVQLPIHRSRSVP 200
P TP+ S+ S HGG T KG + I RSRSVP
Sbjct: 143 SRSLSLSKLFTPRIKRTSSLPVTPVILSNSESAHGGTSVAPQTPNRKG-SVHIARSRSVP 201
Query: 201 SFTEEGNTTPVGAKFRVIPTTPRIDEKIATTTSTKSPTDDAVENEDGGEDIPEEEAVCRI 260
+E + + + FRVIP+TPR+ E S S + + GEDIPE+EAVCRI
Sbjct: 202 LNDKELSLKGMDSFFRVIPSTPRVKE--GDVFSNASEAGNTETGDADGEDIPEDEAVCRI 259
Query: 261 CMVELGEGANTFKLECSCKGELSLAHQECAVKWFRIKGNRTCDVCKQEVKNLPVTLLRVQ 320
C+VEL EG T K+ECSCKGEL+LAH++CA+KWF IKGN+TC+VCKQEVKNLPVTLLR+Q
Sbjct: 260 CLVELCEGGETLKMECSCKGELALAHKDCALKWFTIKGNKTCEVCKQEVKNLPVTLLRIQ 319
Query: 321 TVLGSRGQLAETSQYRVLQDAPILVIVNMLAYFCFLEQLLV---SSASLVDSIPFS 373
++ S + S YRV Q+ P+LVI++MLAYFCFLEQLLV + ++ S+PFS
Sbjct: 320 SLRNSGVPQLDVSGYRVWQEVPVLVIISMLAYFCFLEQLLVENMGTGAIAISLPFS 375
>AT5G60580.1 | Symbols: | RING/U-box superfamily protein |
chr5:24354298-24356706 FORWARD LENGTH=487
Length = 487
Score = 222 bits (565), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 147/356 (41%), Positives = 196/356 (55%), Gaps = 24/356 (6%)
Query: 34 SPEITEELTSG-QYETRPNIILEIPTITQEEAREDYLRIDIPPTPSPRRVIFPPCLSPGF 92
S ITE+ ++ Q R N+ L+IP+ + ED + I +PPTPSP L+
Sbjct: 28 SSAITEDTSANVQQWRRKNLSLQIPSRAAGLSPEDSVVIKMPPTPSPTPRRVNFALTSSS 87
Query: 93 SRANEXXXXXXXXXXXTIKTFLPKLSFKFLNTSSDIEKAAFLALEGSAPKKPFXXXXXXX 152
++K LPK K +++DIEK +G+A P
Sbjct: 88 PGPTPTSSSVLPRGKSSLKNLLPKAGCKPKTSNTDIEKG-----QGNACSPPASQEKASI 142
Query: 153 XXXXX------------XXXPGTPIAHSHPGSLHGGNMAYLATTVEKGVQLPIHRSRSVP 200
P TP+ S+ S HGG T KG + I RSRSVP
Sbjct: 143 SRSLSLSKLFTPRIKRTSSLPVTPVILSNSESAHGGTSVAPQTPNRKG-SVHIARSRSVP 201
Query: 201 SFTEEGNTTPVGAKFRVIPTTPRIDEKIATTTSTKSPTDDAVENEDGGEDIPEEEAVCRI 260
+E + + + FRVIP+TPR+ E S S + + GEDIPE+EAVCRI
Sbjct: 202 LNDKELSLKGMDSFFRVIPSTPRVKE--GDVFSNASEAGNTETGDADGEDIPEDEAVCRI 259
Query: 261 CMVELGEGANTFKLECSCKGELSLAHQECAVKWFRIKGNRTCDVCKQEVKNLPVTLLRVQ 320
C+VEL EG T K+ECSCKGEL+LAH++CA+KWF IKGN+TC+VCKQEVKNLPVTLLR+Q
Sbjct: 260 CLVELCEGGETLKMECSCKGELALAHKDCALKWFTIKGNKTCEVCKQEVKNLPVTLLRIQ 319
Query: 321 TVLGSRGQLAETSQYRVLQDAPILVIVNMLAYFCFLEQLLV---SSASLVDSIPFS 373
++ S + S YRV Q+ P+LVI++MLAYFCFLEQLLV + ++ S+PFS
Sbjct: 320 SLRNSGVPQLDVSGYRVWQEVPVLVIISMLAYFCFLEQLLVENMGTGAIAISLPFS 375
>AT5G18760.1 | Symbols: | RING/U-box superfamily protein |
chr5:6258508-6260828 REVERSE LENGTH=411
Length = 411
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/127 (48%), Positives = 86/127 (67%), Gaps = 10/127 (7%)
Query: 256 AVCRICMVELGEGANTFKLECSCKGELSLAHQECAVKWFRIKGNRTCDVCKQEVKNLPVT 315
AVCRIC+ ++ E NT K+ECSCKG+L L H+ CA+KWF KG R CDVC+QEV+NLPV
Sbjct: 201 AVCRICL-DVCEEGNTLKMECSCKGDLRLVHEHCAIKWFSTKGTRICDVCRQEVRNLPVI 259
Query: 316 LLRVQTV--LGSRGQLAETS----QYRVLQDAPILVIVNMLAYFCFLEQLLV---SSASL 366
LLRV T+ L +R +L + S V Q+ +LV+++ + YF FLE LL+ +S ++
Sbjct: 260 LLRVPTINQLTNRRELTQQSSEPQSISVGQEFVVLVLISTVCYFFFLEHLLIRDLNSQAI 319
Query: 367 VDSIPFS 373
+ PFS
Sbjct: 320 FVAAPFS 326
>AT3G06330.3 | Symbols: | RING/U-box superfamily protein |
chr3:1917334-1919330 FORWARD LENGTH=363
Length = 363
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/112 (50%), Positives = 75/112 (66%), Gaps = 7/112 (6%)
Query: 256 AVCRICMVELGEGANTFKLECSCKGELSLAHQECAVKWFRIKGNRTCDVCKQEVKNLPVT 315
AVCRIC+ ++ E NT K+ECSCKG+L L H+ CA+KWF KG RTCDVC+Q V+NLPVT
Sbjct: 216 AVCRICL-DVCEEGNTLKMECSCKGDLRLVHEACAMKWFSTKGTRTCDVCRQVVQNLPVT 274
Query: 316 LLRVQT------VLGSRGQLAETSQYRVLQDAPILVIVNMLAYFCFLEQLLV 361
L+RV T GS Q + Q+ +LV+++ + YF FLEQLL+
Sbjct: 275 LVRVPTPNQQNNRRGSSQQNMPSQTVSAWQEFVVLVLISTVCYFFFLEQLLI 326
>AT3G06330.1 | Symbols: | RING/U-box superfamily protein |
chr3:1917334-1919709 FORWARD LENGTH=426
Length = 426
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/112 (50%), Positives = 75/112 (66%), Gaps = 7/112 (6%)
Query: 256 AVCRICMVELGEGANTFKLECSCKGELSLAHQECAVKWFRIKGNRTCDVCKQEVKNLPVT 315
AVCRIC+ ++ E NT K+ECSCKG+L L H+ CA+KWF KG RTCDVC+Q V+NLPVT
Sbjct: 216 AVCRICL-DVCEEGNTLKMECSCKGDLRLVHEACAMKWFSTKGTRTCDVCRQVVQNLPVT 274
Query: 316 LLRVQT------VLGSRGQLAETSQYRVLQDAPILVIVNMLAYFCFLEQLLV 361
L+RV T GS Q + Q+ +LV+++ + YF FLEQLL+
Sbjct: 275 LVRVPTPNQQNNRRGSSQQNMPSQTVSAWQEFVVLVLISTVCYFFFLEQLLI 326
>AT3G06330.2 | Symbols: | RING/U-box superfamily protein |
chr3:1918512-1919709 FORWARD LENGTH=257
Length = 257
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 82/127 (64%), Gaps = 10/127 (7%)
Query: 256 AVCRICMVELGEGANTFKLECSCKGELSLAHQECAVKWFRIKGNRTCDVCKQEVKNLPVT 315
AVCRIC+ ++ E NT K+ECSCKG+L L H+ CA+KWF KG RTCDVC+Q V+NLPVT
Sbjct: 47 AVCRICL-DVCEEGNTLKMECSCKGDLRLVHEACAMKWFSTKGTRTCDVCRQVVQNLPVT 105
Query: 316 LLRVQT------VLGSRGQLAETSQYRVLQDAPILVIVNMLAYFCFLEQLLV---SSASL 366
L+RV T GS Q + Q+ +LV+++ + YF FLEQLL+ + ++
Sbjct: 106 LVRVPTPNQQNNRRGSSQQNMPSQTVSAWQEFVVLVLISTVCYFFFLEQLLIRDLNKQAI 165
Query: 367 VDSIPFS 373
+ PFS
Sbjct: 166 YIAAPFS 172
>AT2G37950.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr2:15882536-15883665 REVERSE LENGTH=207
Length = 207
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 44/62 (70%), Gaps = 3/62 (4%)
Query: 252 PEEEAVCRICMVEL-GEGANTFKLECSCKGELSLAHQECAVKWFRIKGNRTCDVCKQEVK 310
PE++ CRIC + + G +L CSCK +L++AH++CA WF+IKG++TC++C+ +
Sbjct: 80 PEKD--CRICHLGVETSGGGAIELGCSCKDDLAVAHRQCAETWFKIKGDKTCEICQSVAR 137
Query: 311 NL 312
N+
Sbjct: 138 NV 139
>AT5G01070.2 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr5:25094-25799 REVERSE LENGTH=206
Length = 206
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 6/65 (9%)
Query: 252 PEEEAVCRICMVEL----GEGANTFKLECSCKGELSLAHQECAVKWFRIKGNRTCDVCKQ 307
PE++ CRIC + L E + L CSCK +L H++CA WF+IKGN+TC++C+
Sbjct: 74 PEKD--CRICHLGLESSRHECGDPMVLGCSCKDDLGYVHKQCADTWFKIKGNKTCEICRS 131
Query: 308 EVKNL 312
+N
Sbjct: 132 IAQNF 136
>AT5G59000.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr5:23818768-23820018 FORWARD LENGTH=231
Length = 231
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 6/95 (6%)
Query: 272 FKLECSCKGELSLAHQECAVKWFRIKGNRTCDVCKQEVKNL------PVTLLRVQTVLGS 325
+L CSCKG+L +AH +CA WF+IKGN TC++C N+ P + + +
Sbjct: 130 LQLGCSCKGDLGVAHSKCAETWFKIKGNMTCEICGAMALNVAGEQSNPESTASTHSQAAA 189
Query: 326 RGQLAETSQYRVLQDAPILVIVNMLAYFCFLEQLL 360
L +T + P++ + F F+ L
Sbjct: 190 GQSLTQTEPRGIWHGRPVMNFLLAAMVFAFVVSWL 224
>AT5G05830.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr5:1755910-1756825 FORWARD LENGTH=204
Length = 204
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Query: 251 IPEEEAVCRICMVELGEGANT-----FKLECSCKGELSLAHQECAVKWFRIKGNRTCDVC 305
+ + E CRIC + L + AN +L CSCK +L+ AH+ CA WF+IKGN+ C+VC
Sbjct: 72 LSQSERDCRICHMSL-DAANLESGVPIELGCSCKADLAAAHKHCAETWFKIKGNKICEVC 130
Query: 306 KQEVKNL 312
N+
Sbjct: 131 GSIAGNV 137
>AT1G14260.2 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr1:4873200-4874430 FORWARD LENGTH=265
Length = 265
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 234 TKSPTDDAVENEDGGEDIPEEE------AVCRICMVELGEGANTFKLECSCKGELSLAHQ 287
T+SP D+A++ DG EEE A CRIC E + C+C G L AH+
Sbjct: 27 TESPADNAIDIYDGDTTENEEEDSLISSAECRICQDECD--IKNLESPCACNGSLKYAHR 84
Query: 288 ECAVKWFRIKGNRTCDVCKQ 307
+C +W KGN C++C Q
Sbjct: 85 KCVQRWCNEKGNTICEICHQ 104
>AT1G14260.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr1:4873200-4874430 FORWARD LENGTH=265
Length = 265
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 234 TKSPTDDAVENEDGGEDIPEEE------AVCRICMVELGEGANTFKLECSCKGELSLAHQ 287
T+SP D+A++ DG EEE A CRIC E + C+C G L AH+
Sbjct: 27 TESPADNAIDIYDGDTTENEEEDSLISSAECRICQDECD--IKNLESPCACNGSLKYAHR 84
Query: 288 ECAVKWFRIKGNRTCDVCKQ 307
+C +W KGN C++C Q
Sbjct: 85 KCVQRWCNEKGNTICEICHQ 104
>AT5G38070.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr5:15190254-15191588 FORWARD LENGTH=259
Length = 259
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 11/88 (12%)
Query: 231 TTSTKSPTDDAVENEDG-------GEDIPEEEAV-CRICMVELGEGANTFKLECSCKGEL 282
T + P D+V NEDG G D+ E + V CRIC E + CSC G L
Sbjct: 20 TVNRADPKADSV-NEDGVSESISAGADLCESKFVQCRICHDE--DEDTNMDTPCSCSGTL 76
Query: 283 SLAHQECAVKWFRIKGNRTCDVCKQEVK 310
AH C +W KG+ C++C+Q+ K
Sbjct: 77 KFAHHNCVQRWCNEKGDTVCEICRQQYK 104
>AT2G34200.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr2:14441105-14441882 FORWARD LENGTH=222
Length = 222
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 29/83 (34%)
Query: 255 EAVCRIC--------------------MVELGEGANTFKLECSCKGELSLAHQECAVKWF 294
E +CRIC ++E+G C CK EL LAH CA WF
Sbjct: 99 ERICRICHFGSDQSPEASGDDKSVSPELIEIG---------CKCKNELGLAHFHCAEAWF 149
Query: 295 RIKGNRTCDVCKQEVKNLPVTLL 317
+++GN C++C KN+ V L+
Sbjct: 150 KLRGNSVCEICGCTAKNVTVRLM 172
>AT1G02610.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr1:553181-555854 REVERSE LENGTH=221
Length = 221
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 258 CRICMVELGEGANTFKLECSCKGELSLAHQECAVKWFRIKGNRTCDVCKQEVK 310
CRIC E E + F+ CSC G + AH++C +W KGN C++C QE K
Sbjct: 20 CRICHEE--EAESYFEAPCSCSGTIKFAHRDCIQRWCDEKGNTICEICLQEYK 70
>AT4G34100.1 | Symbols: | RING/U-box superfamily protein |
chr4:16330590-16334864 FORWARD LENGTH=1108
Length = 1108
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 236 SPTDDAVENEDGGEDIPEEEA---VCRICMVELGEGANTFKLECSCKGELSLAHQECAVK 292
S D AV G + ++E VCRIC G+ N + C+C G + HQ+C ++
Sbjct: 43 SNMDPAVSTATGSRYVDDDEDEEDVCRICR-NPGDADNPLRYPCACSGSIKFVHQDCLLQ 101
Query: 293 WFRIKGNRTCDVCKQEVKNLPV 314
W R C+VCK PV
Sbjct: 102 WLNHSNARQCEVCKHPFSFSPV 123
>AT4G34100.2 | Symbols: | RING/U-box superfamily protein |
chr4:16330590-16334864 FORWARD LENGTH=1107
Length = 1107
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 236 SPTDDAVENEDGGEDIPEEEA---VCRICMVELGEGANTFKLECSCKGELSLAHQECAVK 292
S D AV G + ++E VCRIC G+ N + C+C G + HQ+C ++
Sbjct: 43 SNMDPAVSTATGSRYVDDDEDEEDVCRICR-NPGDADNPLRYPCACSGSIKFVHQDCLLQ 101
Query: 293 WFRIKGNRTCDVCKQEVKNLPV 314
W R C+VCK PV
Sbjct: 102 WLNHSNARQCEVCKHPFSFSPV 123
>AT5G63780.1 | Symbols: SHA1 | RING/FYVE/PHD zinc finger superfamily
protein | chr5:25525160-25526446 FORWARD LENGTH=367
Length = 367
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 225 DEKIATTTSTKSPTDDAVENEDGGEDIPEEEAVCRICMVELGEGANT-----FKLECSCK 279
D AT + K+ + E G ++ +A IC ++ G +L CSCK
Sbjct: 83 DVSKATESELKNSVVKSNGRESGFIELTSPDAEVFICTNDIEMGIQQHQDALLELGCSCK 142
Query: 280 GELSLAHQECAVKWFRIKGNRTCDVCKQEVKNL 312
EL+L H CA+KWF G+ C++C +N+
Sbjct: 143 NELALVHYACALKWFLNHGSTVCEICGHPAENI 175
>AT2G01275.2 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr2:142610-143809 REVERSE LENGTH=259
Length = 259
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 256 AVCRICMVELGEGANTFKLECSCKGELSLAHQECAVKWFRIKGNRTCDVCKQEVK 310
A CRIC E + + + CSC G + AH+ C +W KG+ TC++C QE K
Sbjct: 57 AECRICHDE--DLDSNMETPCSCSGSVKYAHRRCVQRWCNEKGDTTCEICHQEFK 109
>AT2G01275.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr2:142610-143809 REVERSE LENGTH=259
Length = 259
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 256 AVCRICMVELGEGANTFKLECSCKGELSLAHQECAVKWFRIKGNRTCDVCKQEVK 310
A CRIC E + + + CSC G + AH+ C +W KG+ TC++C QE K
Sbjct: 57 AECRICHDE--DLDSNMETPCSCSGSVKYAHRRCVQRWCNEKGDTTCEICHQEFK 109
>AT5G08750.2 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr5:2853066-2854343 FORWARD LENGTH=363
Length = 363
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 272 FKLECSCKGELSLAHQECAVKWFRIKGNRTCDVCKQEVKNL-PVTLLRVQTVLGSRGQLA 330
+L CSCK +L+L H CA+KWF G+ C++C + +N+ V +V L L
Sbjct: 123 LELGCSCKNDLALVHYACALKWFVNHGSTVCEICGKTTENIRTVDFNKVVIALKDYAALR 182
Query: 331 ETSQYRVLQDAPILVIVN 348
E R P V+VN
Sbjct: 183 E----RTADGDPNPVVVN 196
>AT5G08750.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr5:2853066-2854343 FORWARD LENGTH=363
Length = 363
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 272 FKLECSCKGELSLAHQECAVKWFRIKGNRTCDVCKQEVKNL-PVTLLRVQTVLGSRGQLA 330
+L CSCK +L+L H CA+KWF G+ C++C + +N+ V +V L L
Sbjct: 123 LELGCSCKNDLALVHYACALKWFVNHGSTVCEICGKTTENIRTVDFNKVVIALKDYAALR 182
Query: 331 ETSQYRVLQDAPILVIVN 348
E R P V+VN
Sbjct: 183 E----RTADGDPNPVVVN 196
>AT5G08750.3 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr5:2852912-2854343 FORWARD LENGTH=370
Length = 370
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 272 FKLECSCKGELSLAHQECAVKWFRIKGNRTCDVCKQEVKNL 312
+L CSCK +L+L H CA+KWF G+ C++C + +N+
Sbjct: 130 LELGCSCKNDLALVHYACALKWFVNHGSTVCEICGKTTENI 170
>AT3G47550.6 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr3:17523841-17525278 FORWARD LENGTH=288
Length = 288
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 258 CRICMVELGEGANTFKLECSCKGELSLAHQECAVKWFRIKGNRTCDVCKQEVKN 311
CRIC E + + C+C G L AH++C +W KG+ TC++C Q ++
Sbjct: 69 CRICQEE--DSTKNLEAPCACNGSLKYAHRKCVQRWCNEKGDITCEICHQPYQH 120
>AT3G47550.3 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr3:17523841-17525278 FORWARD LENGTH=288
Length = 288
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 258 CRICMVELGEGANTFKLECSCKGELSLAHQECAVKWFRIKGNRTCDVCKQEVKN 311
CRIC E + + C+C G L AH++C +W KG+ TC++C Q ++
Sbjct: 69 CRICQEE--DSTKNLEAPCACNGSLKYAHRKCVQRWCNEKGDITCEICHQPYQH 120