Miyakogusa Predicted Gene

Lj0g3v0300619.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0300619.1 Non Chatacterized Hit- tr|I1MC65|I1MC65_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,81.46,0,seg,NULL;
Chaperone J-domain,Heat shock protein DnaJ, N-terminal; DUF4101,Domain
of unknown function,CUFF.20206.1
         (789 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G42480.1 | Symbols: ARC6 | Chaperone DnaJ-domain superfamily ...   847   0.0  
AT3G19180.2 | Symbols: ARC6H, PARC6, ATCDP1, CDP1 | paralog of A...    95   2e-19
AT3G19180.1 | Symbols: ARC6H, PARC6, ATCDP1, CDP1 | paralog of A...    95   2e-19

>AT5G42480.1 | Symbols: ARC6 | Chaperone DnaJ-domain superfamily
           protein | chr5:16985295-16988332 FORWARD LENGTH=801
          Length = 801

 Score =  847 bits (2187), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 450/792 (56%), Positives = 553/792 (69%), Gaps = 39/792 (4%)

Query: 26  PKTNKLHL--HSSVSASATSKWAERLISDFQFLGDXXXXXXXXXXXXXXXXX----XXXX 79
           P T KL    ++S +  + SKWA+RL+SDF F  D                         
Sbjct: 21  PATTKLRRSHNTSTTICSASKWADRLLSDFNFTSDSSSSSFATATTTATLVSPPPSIDRP 80

Query: 80  ERQVTIPLDLYRLLGAESHFLGDGIRRAYEAKFSKPPQYAFSNDALISRRQILQAACETL 139
           ER V IP+D Y++LGA++HFL DGIRRA+EA+ SKPPQ+ FS+DALISRRQILQAACETL
Sbjct: 81  ERHVPIPIDFYQVLGAQTHFLTDGIRRAFEARVSKPPQFGFSDDALISRRQILQAACETL 140

Query: 140 ADPASRRDYNQHLLDDEDAAILTQVPFDKVPGALCALQEAGETELVLQVGEGLLRERLPK 199
           ++P SRR+YN+ LLDDE+A ++T VP+DKVPGALC LQE GETE+VL+VGE LL+ERLPK
Sbjct: 141 SNPRSRREYNEGLLDDEEATVITDVPWDKVPGALCVLQEGGETEIVLRVGEALLKERLPK 200

Query: 200 TFKQDVVLAMALAFVDISRDAMALSPPDFVVASEMLERALRLLQEEGASSLAPDLQAQID 259
           +FKQDVVL MALAF+D+SRDAMAL PPDF+   E +E AL+LLQEEGASSLAPDL+AQID
Sbjct: 201 SFKQDVVLVMALAFLDVSRDAMALDPPDFITGYEFVEEALKLLQEEGASSLAPDLRAQID 260

Query: 260 ETLEEITPRCVLELLALPLGDEHRARREEGLHGVRNILWXXXXXXXXXXXXXFTREDFMN 319
           ETLEEITPR VLELL LPLGD++ A+R  GL GVRNILW              TRE FMN
Sbjct: 261 ETLEEITPRYVLELLGLPLGDDYAAKRLNGLSGVRNILWSVGGGGASALVGGLTREKFMN 320

Query: 320 EAFLHMTAAEQVELFVATPSNIPAESFEAYGVALALVAQAFVGKKPHLIQDADNLFQQLQ 379
           EAFL MTAAEQV+LFVATPSNIPAESFE Y VALALVAQAF+GKKPHL+QDAD  FQQLQ
Sbjct: 321 EAFLRMTAAEQVDLFVATPSNIPAESFEVYEVALALVAQAFIGKKPHLLQDADKQFQQLQ 380

Query: 380 QTKVTAMRNASDVHTPNERRDVDFALERGLCALLVGELDQCRTWLGLDSDSSPYRNPSII 439
           Q KV AM   + ++      ++DF LERGLCALL+G++D+CR WLGLDS+ S YRNP+I+
Sbjct: 381 QAKVMAMEIPAMLYDTRNNWEIDFGLERGLCALLIGKVDECRMWLGLDSEDSQYRNPAIV 440

Query: 440 DFILENAKGDEDSDLPGLCKLLETWLMEVVFPRFRDTQDSGFKLGDYYDDPKVLRYLERL 499
           +F+LEN+  D++ DLPGLCKLLETWL  VVFPRFRDT+D  FKLGDYYDDP VL YLER+
Sbjct: 441 EFVLENSNRDDNDDLPGLCKLLETWLAGVVFPRFRDTKDKKFKLGDYYDDPMVLSYLERV 500

Query: 500 EGVGRSPLXXXXXXXXXXXXXXTAAIG--HVQASAINALKKVFPVASNDQIVKHPENSEK 557
           E V  SPL               A IG  HV+ASA+ AL+KVFP    D+    P++ ++
Sbjct: 501 EVVQGSPL---------AAAAAMARIGAEHVKASAMQALQKVFPSRYTDRNSAEPKDVQE 551

Query: 558 NYSSLSDSENPPILSDQDTSVNV-EASGIKNTTEINDGKL-----------------ITD 599
              S+    N  +  D +  V + EA       E ND  +                 + D
Sbjct: 552 TVFSVDPVGN-NVGRDGEPGVFIAEAVRPSENFETNDYAIRAGVSESSVDETTVEMSVAD 610

Query: 600 EIKYASVKIMCAGAVIGLVTLAGLKFLPARNSSPILRKVSGSAMASDTIKLGD--EELAE 657
            +K ASVKI+ AG  IGL++L   K+   ++SS   RK   S+M SD   +G    + +E
Sbjct: 611 MLKEASVKILAAGVAIGLISLFSQKYF-LKSSSSFQRKDMVSSMESDVATIGSVRADDSE 669

Query: 658 ELPKMNARVAEALVRKWQNIKSQAFGPDHCLGRLQEVLDGEMLKIWTDRAAEIAERGWSY 717
            LP+M+AR AE +V KWQ IKS AFGPDH +  L EVLDG MLKIWTDRAAE A+ G  Y
Sbjct: 670 ALPRMDARTAENIVSKWQKIKSLAFGPDHRIEMLPEVLDGRMLKIWTDRAAETAQLGLVY 729

Query: 718 DYTLEDLNIDSVTISQNGRRAVVETTLSESAHLTAVGHPQHDASNSRTYTTRYEMSFSGS 777
           DYTL  L++DSVT+S +G RA+VE TL ESA L+ + HP+++A++ RTYTTRYE+ +S S
Sbjct: 730 DYTLLKLSVDSVTVSADGTRALVEATLEESACLSDLVHPENNATDVRTYTTRYEVFWSKS 789

Query: 778 GWKIVEGAVLES 789
           GWKI EG+VL S
Sbjct: 790 GWKITEGSVLAS 801


>AT3G19180.2 | Symbols: ARC6H, PARC6, ATCDP1, CDP1 | paralog of ARC6
           | chr3:6632810-6636547 FORWARD LENGTH=748
          Length = 748

 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 106/430 (24%), Positives = 177/430 (41%), Gaps = 58/430 (13%)

Query: 83  VTIPLDLYRLLGAESHFLGDGIRRAYEAKFSKPPQYAFSNDALISRRQILQAACETLADP 142
           + +P+  Y+L+G       D + ++         +  ++ +A  +R+ +L    + L   
Sbjct: 93  IELPVTCYQLIGVSEQAEKDEVVKSVINLKKTDAEEGYTMEAAAARQDLLMDVRDKLLFE 152

Query: 143 ASRRDYNQHLLDDEDAAILTQVPFDKVPGALCALQEAGETELVLQVGEGLLRERLPKTFK 202
           +   +Y  +L +        ++P+  +PGALC LQE G+ +LVL +G   LR    K + 
Sbjct: 153 S---EYAGNLKEKIAPKSPLRIPWAWLPGALCLLQEVGQEKLVLDIGRAALRNLDSKPYI 209

Query: 203 QDVVLAMALAFVDISRDAMALSPPDFVVASEMLERALRLLQEEGA-SSLAPDLQAQIDET 261
            D+ L+MALA   I++ A  ++        E L RA   L+ +     LA  L  QI+E+
Sbjct: 210 HDIFLSMALAECAIAKAAFEVN--KVSQGFEALARAQSFLKSKVTLGKLA--LLTQIEES 265

Query: 262 LEEITPRCVLELLALPLGDEHRARREEGLHGVRNILWXXXXXXXXXXXXXFTREDFMNEA 321
           LEE+ P C L+LL LP   E+  RR   +  +R +L              +    F+++A
Sbjct: 266 LEELAPPCTLDLLGLPRTPENAERRRGAIAALRELLRQGLSVEASCQIQDWP--CFLSQA 323

Query: 322 FLHMTAAEQVEL-----FVATPSNIPAESFEA------------YGVALALVAQAFVGKK 364
              + A E V+L        T  N   +S E+            Y V L  +A  F GK+
Sbjct: 324 ISRLLATEIVDLLPWDDLAITRKN--KKSLESHNQRVVIDFNCFYMVLLGHIAVGFSGKQ 381

Query: 365 PHLIQDADNLFQQLQQTKVTAMRNASDVHTPNERRDVDFALERGLCALLV---GELDQCR 421
              I  A  + + L  ++                  VD   E   C+ L+    E +   
Sbjct: 382 NETINKAKTICECLIASE-----------------GVDLKFEEAFCSFLLKQGSEAEALE 424

Query: 422 TWLGLDSDSSPYRNPSIIDFILENAKGDEDSDLPGLCKLLETWLMEVVFPRFRDTQDSGF 481
               L+S+S         D  + N+   ++S        LE WLME V   F DT+    
Sbjct: 425 KLKQLESNS---------DSAVRNSILGKESRSTSATPSLEAWLMESVLANFPDTRGCSP 475

Query: 482 KLGDYYDDPK 491
            L +++   K
Sbjct: 476 SLANFFRAEK 485


>AT3G19180.1 | Symbols: ARC6H, PARC6, ATCDP1, CDP1 | paralog of ARC6
           | chr3:6632810-6636953 FORWARD LENGTH=819
          Length = 819

 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 106/430 (24%), Positives = 177/430 (41%), Gaps = 58/430 (13%)

Query: 83  VTIPLDLYRLLGAESHFLGDGIRRAYEAKFSKPPQYAFSNDALISRRQILQAACETLADP 142
           + +P+  Y+L+G       D + ++         +  ++ +A  +R+ +L    + L   
Sbjct: 93  IELPVTCYQLIGVSEQAEKDEVVKSVINLKKTDAEEGYTMEAAAARQDLLMDVRDKLLFE 152

Query: 143 ASRRDYNQHLLDDEDAAILTQVPFDKVPGALCALQEAGETELVLQVGEGLLRERLPKTFK 202
           +   +Y  +L +        ++P+  +PGALC LQE G+ +LVL +G   LR    K + 
Sbjct: 153 S---EYAGNLKEKIAPKSPLRIPWAWLPGALCLLQEVGQEKLVLDIGRAALRNLDSKPYI 209

Query: 203 QDVVLAMALAFVDISRDAMALSPPDFVVASEMLERALRLLQEEGA-SSLAPDLQAQIDET 261
            D+ L+MALA   I++ A  ++        E L RA   L+ +     LA  L  QI+E+
Sbjct: 210 HDIFLSMALAECAIAKAAFEVN--KVSQGFEALARAQSFLKSKVTLGKLA--LLTQIEES 265

Query: 262 LEEITPRCVLELLALPLGDEHRARREEGLHGVRNILWXXXXXXXXXXXXXFTREDFMNEA 321
           LEE+ P C L+LL LP   E+  RR   +  +R +L              +    F+++A
Sbjct: 266 LEELAPPCTLDLLGLPRTPENAERRRGAIAALRELLRQGLSVEASCQIQDWP--CFLSQA 323

Query: 322 FLHMTAAEQVEL-----FVATPSNIPAESFEA------------YGVALALVAQAFVGKK 364
              + A E V+L        T  N   +S E+            Y V L  +A  F GK+
Sbjct: 324 ISRLLATEIVDLLPWDDLAITRKN--KKSLESHNQRVVIDFNCFYMVLLGHIAVGFSGKQ 381

Query: 365 PHLIQDADNLFQQLQQTKVTAMRNASDVHTPNERRDVDFALERGLCALLV---GELDQCR 421
              I  A  + + L  ++                  VD   E   C+ L+    E +   
Sbjct: 382 NETINKAKTICECLIASE-----------------GVDLKFEEAFCSFLLKQGSEAEALE 424

Query: 422 TWLGLDSDSSPYRNPSIIDFILENAKGDEDSDLPGLCKLLETWLMEVVFPRFRDTQDSGF 481
               L+S+S         D  + N+   ++S        LE WLME V   F DT+    
Sbjct: 425 KLKQLESNS---------DSAVRNSILGKESRSTSATPSLEAWLMESVLANFPDTRGCSP 475

Query: 482 KLGDYYDDPK 491
            L +++   K
Sbjct: 476 SLANFFRAEK 485



 Score = 52.0 bits (123), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 2/82 (2%)

Query: 656 AEELPK--MNARVAEALVRKWQNIKSQAFGPDHCLGRLQEVLDGEMLKIWTDRAAEIAER 713
           A EL K  M+   AE LVR+W+N+K++A GP H +  L EVLD  ML  W   A     +
Sbjct: 680 ASELHKRPMDTEEAEELVRQWENVKAEALGPTHQVYSLSEVLDESMLVQWQTLAQTAEAK 739

Query: 714 GWSYDYTLEDLNIDSVTISQNG 735
              + + L  L +    I ++G
Sbjct: 740 SCYWRFVLLHLEVLQAHIFEDG 761