Miyakogusa Predicted Gene

Lj0g3v0300519.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0300519.1 Non Chatacterized Hit- tr|K4B6L8|K4B6L8_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,59.26,2e-18,
,CUFF.20194.1
         (88 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G37790.1 | Symbols:  | Protein kinase superfamily protein | c...   108   5e-25
AT1G66460.1 | Symbols:  | Protein kinase superfamily protein | c...   102   5e-23

>AT5G37790.1 | Symbols:  | Protein kinase superfamily protein |
           chr5:15008433-15011025 REVERSE LENGTH=552
          Length = 552

 Score =  108 bits (271), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 56/90 (62%), Positives = 70/90 (77%), Gaps = 4/90 (4%)

Query: 1   MGRMIEAAAACVTNEESRRPGIHEIIAILKGEE--EPIFCKRKKSSFLANGCVIDCYSQL 58
           M RMI AAAACV NEESRRPG+ EI++ILKGEE  EP     +K++ ++   +ID Y+QL
Sbjct: 465 MERMIRAAAACVINEESRRPGMEEIVSILKGEEGVEPETHSSRKTTNISG--MIDSYTQL 522

Query: 59  QQTNNEMKSHLALAMLGVSEFEDDDYLYDR 88
           QQT +EMK HL LAMLGV+EFEDDD++Y R
Sbjct: 523 QQTKSEMKCHLDLAMLGVTEFEDDDHVYGR 552


>AT1G66460.1 | Symbols:  | Protein kinase superfamily protein |
           chr1:24789894-24791988 REVERSE LENGTH=467
          Length = 467

 Score =  102 bits (254), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 54/88 (61%), Positives = 63/88 (71%), Gaps = 6/88 (6%)

Query: 1   MGRMIEAAAACVTNEESRRPGIHEIIAILKGEEE---PIFCKRKKSSFLANGCVIDCYSQ 57
           M RMI AAAACV NEESRRPG+ EI++ILKG E         RKKS+      ++DCY Q
Sbjct: 383 MERMIRAAAACVINEESRRPGMKEILSILKGGEGIELRTLSSRKKSNLPG---IMDCYPQ 439

Query: 58  LQQTNNEMKSHLALAMLGVSEFEDDDYL 85
           LQ+T +EMKSHL LAMLGV+EFE DD L
Sbjct: 440 LQRTKSEMKSHLTLAMLGVTEFEADDLL 467