Miyakogusa Predicted Gene
- Lj0g3v0299949.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0299949.1 tr|Q9LF32|Q9LF32_ARATH Ankyrin repeat-containing
protein OS=Arabidopsis thaliana GN=T20K14_110 PE=2
,33.16,2e-18,PGG,PGG domain; Ank_5,NULL; no description,Ankyrin
repeat-containing domain; seg,NULL; ANK_REPEAT,An,CUFF.20148.1
(198 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G10720.1 | Symbols: | Ankyrin repeat family protein | chr4:6... 77 8e-15
AT5G15500.2 | Symbols: | Ankyrin repeat family protein | chr5:5... 75 2e-14
AT5G15500.1 | Symbols: | Ankyrin repeat family protein | chr5:5... 75 3e-14
AT4G11000.1 | Symbols: | Ankyrin repeat family protein | chr4:6... 73 1e-13
AT4G10720.2 | Symbols: | Ankyrin repeat family protein | chr4:6... 71 4e-13
AT1G14500.1 | Symbols: | Ankyrin repeat family protein | chr1:4... 70 1e-12
AT1G14480.1 | Symbols: | Ankyrin repeat family protein | chr1:4... 64 8e-11
AT5G54620.1 | Symbols: | Ankyrin repeat family protein | chr5:2... 50 8e-07
>AT4G10720.1 | Symbols: | Ankyrin repeat family protein |
chr4:6607879-6609358 FORWARD LENGTH=445
Length = 445
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 89/204 (43%), Gaps = 18/204 (8%)
Query: 2 LKKNRERGSMEMENMILNWKDEEGNTILHISALTKDSQAIELLVE-TKIDLKAKNLENST 60
+++ R+ + +E LN +D++GNT LHI+A +A+++LV+ + ++ N T
Sbjct: 162 VQRLRQTDAESLEMQFLNKRDQDGNTALHIAAYQNRFKAVKILVKCSAVNRNIHNRTGLT 221
Query: 61 ALDIAVSDEIETILSKAEEKHRSW------VIIIVPTFADALRSKIAFVEKIIVSLLRIG 114
ALDI + S E R W + ++ LRS I+F E + R
Sbjct: 222 ALDILHNQRDHHANSNIENIIRKWGGKSGNSLPKSKKVSEILRSPISFTEHLFTQTARYR 281
Query: 115 NSISEEQRNXXXXXXXXXXXXXYQAALSPPGGVFQANAGDXXXXXXXXXXXXXXXXRGKS 174
N SE R+ YQ AL PPGGV+Q NA + G
Sbjct: 282 NQTSEGTRSALLVIAALIITATYQTALQPPGGVYQENAAEESKKSV-----------GTV 330
Query: 175 VLSGSNFLALYFMNTFTFLLSIMM 198
V+S F L +NT F+ +I M
Sbjct: 331 VMSHKYFFVLRGVNTMAFVGAIFM 354
>AT5G15500.2 | Symbols: | Ankyrin repeat family protein |
chr5:5031791-5033443 REVERSE LENGTH=457
Length = 457
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 95/190 (50%), Gaps = 14/190 (7%)
Query: 13 MENMILNWKDEEGNTILHISALTKDSQAIELLVET-KIDLKAKNLENSTALDIAV---SD 68
+E ++N +D++GNT LH++A + QA++LL+E+ KI++ +N T DIAV +
Sbjct: 178 IETRVINRRDKDGNTPLHLAAYEINRQAMKLLLESSKINVNIENKNGLTVFDIAVLHNNR 237
Query: 69 EIETILSKAEEKHRSWVIIIVPTFADALRSKIAFVEKIIVSLLRIGNSISEEQRNXXXXX 128
EIE ++ + K RS ++ + T +D L S++++ E +R + ISEE+RN
Sbjct: 238 EIERMVKRHGGK-RSVSLVKIKTTSDILASQLSWRESRRTKKIRFYSWISEERRNALLVV 296
Query: 129 XXXXXXXXYQAALSPPGGVFQANAGDXXXXXXXXXXXXXXXXRGKSVLSGSNFLALYFMN 188
YQ L PPGGV ++ G G V+ F+ L+ N
Sbjct: 297 ATLIVTATYQTVLQPPGGV--SDGGGQKSGTSGPKA-------GSVVMDEVYFIWLWLWN 347
Query: 189 TFTFLLSIMM 198
+ F +I M
Sbjct: 348 SAGFCFAIEM 357
>AT5G15500.1 | Symbols: | Ankyrin repeat family protein |
chr5:5031791-5032846 REVERSE LENGTH=351
Length = 351
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 95/190 (50%), Gaps = 14/190 (7%)
Query: 13 MENMILNWKDEEGNTILHISALTKDSQAIELLVET-KIDLKAKNLENSTALDIAV---SD 68
+E ++N +D++GNT LH++A + QA++LL+E+ KI++ +N T DIAV +
Sbjct: 72 IETRVINRRDKDGNTPLHLAAYEINRQAMKLLLESSKINVNIENKNGLTVFDIAVLHNNR 131
Query: 69 EIETILSKAEEKHRSWVIIIVPTFADALRSKIAFVEKIIVSLLRIGNSISEEQRNXXXXX 128
EIE ++ + K RS ++ + T +D L S++++ E +R + ISEE+RN
Sbjct: 132 EIERMVKRHGGK-RSVSLVKIKTTSDILASQLSWRESRRTKKIRFYSWISEERRNALLVV 190
Query: 129 XXXXXXXXYQAALSPPGGVFQANAGDXXXXXXXXXXXXXXXXRGKSVLSGSNFLALYFMN 188
YQ L PPGGV ++ G G V+ F+ L+ N
Sbjct: 191 ATLIVTATYQTVLQPPGGV--SDGGGQKSGTSGPKA-------GSVVMDEVYFIWLWLWN 241
Query: 189 TFTFLLSIMM 198
+ F +I M
Sbjct: 242 SAGFCFAIEM 251
>AT4G11000.1 | Symbols: | Ankyrin repeat family protein |
chr4:6731020-6732464 FORWARD LENGTH=406
Length = 406
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 78/147 (53%), Gaps = 19/147 (12%)
Query: 17 ILNWKDEEGNTILHISALTKDSQAIELLVETKIDLKAKNLENSTALDIAVSDE------I 70
IL+WKDE+GNT+ HI+AL ++ ++LL +T + +KAKNL+ TA+DI + +
Sbjct: 137 ILDWKDEDGNTVFHIAALINQTEVMKLLRKT-VKVKAKNLDGKTAMDILQTHQSPCFPVA 195
Query: 71 ETILSKAEEKHRSWVIIIVPTFADALRSKIAFVEKIIVSLLRIGN-------SI-SEEQR 122
+ +L A+E+ T A L ++F+EK SLL + N SI + + R
Sbjct: 196 KKLLRSAKERPFCGSTT---TLAGYLSRNLSFIEK-RNSLLGLSNLSMTKDRSINASDPR 251
Query: 123 NXXXXXXXXXXXXXYQAALSPPGGVFQ 149
N YQA LSPPGG +Q
Sbjct: 252 NAILVVAILIVTATYQAGLSPPGGFWQ 278
>AT4G10720.2 | Symbols: | Ankyrin repeat family protein |
chr4:6607879-6609358 FORWARD LENGTH=412
Length = 412
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 7/160 (4%)
Query: 2 LKKNRERGSMEMENMILNWKDEEGNTILHISALTKDSQAIELLVE-TKIDLKAKNLENST 60
+++ R+ + +E LN +D++GNT LHI+A +A+++LV+ + ++ N T
Sbjct: 162 VQRLRQTDAESLEMQFLNKRDQDGNTALHIAAYQNRFKAVKILVKCSAVNRNIHNRTGLT 221
Query: 61 ALDIAVSDEIETILSKAEEKHRSW------VIIIVPTFADALRSKIAFVEKIIVSLLRIG 114
ALDI + S E R W + ++ LRS I+F E + R
Sbjct: 222 ALDILHNQRDHHANSNIENIIRKWGGKSGNSLPKSKKVSEILRSPISFTEHLFTQTARYR 281
Query: 115 NSISEEQRNXXXXXXXXXXXXXYQAALSPPGGVFQANAGD 154
N SE R+ YQ AL PPGGV+Q NA +
Sbjct: 282 NQTSEGTRSALLVIAALIITATYQTALQPPGGVYQENAAE 321
>AT1G14500.1 | Symbols: | Ankyrin repeat family protein |
chr1:4960375-4961780 FORWARD LENGTH=436
Length = 436
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 34/208 (16%)
Query: 2 LKKNRERGSMEMENMILNWKDEEGNTILHISALTKDSQAIELLVETK-IDLKAKNLENST 60
L++ ++ S E+ LN KD NT LH++A +D QA++LL++ + + L N + T
Sbjct: 162 LQRMSQKDSASTESDFLNRKDLAHNTPLHLAAYKEDHQAVKLLLQCQLVKLNEVNADGLT 221
Query: 61 ALDIA--------VSDEIETILSKAEEKHRSWVIIIVPTF---ADALRSKIAFVEKIIVS 109
LDI + ++E ++ K K + +P +D +S + F+ +
Sbjct: 222 FLDILRNNGQSRDLDKDLEQVVVKTGCKEAA----SLPQLEKPSDQFKSPVTFLAHCSIG 277
Query: 110 LLRIGNSISEEQRNXXXXXXXXXXXXXYQAALSPPGGVFQANAGDXXXXXXXXXXXXXXX 169
+ R+ + SEE R YQ AL PPGGV Q+ G
Sbjct: 278 IRRLRSDTSEEGRAVFLIICTLILTSTYQTALQPPGGVHQSEGG---------------- 321
Query: 170 XRGKSVLSGSNFLALYFMNTFTFLLSIM 197
G +V+ + F+ L+ NT F +++
Sbjct: 322 --GTAVMKQTFFIVLWVSNTIGFCCALL 347
>AT1G14480.1 | Symbols: | Ankyrin repeat family protein |
chr1:4956404-4957888 FORWARD LENGTH=441
Length = 441
Score = 63.5 bits (153), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 27/207 (13%)
Query: 2 LKKNRERGSMEMENMILNWKDEEGNTILHISALTKDSQAIELLVETK-IDLKAKNLENST 60
+++ ++ + +EN +LN +D + NT LH++A D QA++LL++ + ++ N+++ T
Sbjct: 162 IQRMSQKDAYYIENRVLNKRDFDFNTALHLAAYKNDQQALKLLLKCRLVEPNLVNIDDLT 221
Query: 61 ALDI-------AVSDEIETILSKAEEKHRSWVIIIVPTF---ADALRSKIAFVEKIIVSL 110
+DI A ++ L +A K +P F +D L+S I F+ S+
Sbjct: 222 FVDILRTQGENAGGGNLD--LEQAVIKTGCVEAASMPKFKEESDLLKSPINFMTYYSTSM 279
Query: 111 LRIGNSISEEQRNXXXXXXXXXXXXXYQAALSPPGGVFQANAGDXXXXXXXXXXXXXXXX 170
R+ +S S++ R YQ AL PPGGV Q+ +
Sbjct: 280 KRMKSSTSDQDRGAFLIVCTLIITATYQMALQPPGGVHQSENANANA------------- 326
Query: 171 RGKSVLSGSNFLALYFMNTFTFLLSIM 197
G V+ + F+ L+ NT F ++
Sbjct: 327 -GSVVMKQTFFILLWISNTVGFCCAVF 352
>AT5G54620.1 | Symbols: | Ankyrin repeat family protein |
chr5:22187761-22189746 REVERSE LENGTH=431
Length = 431
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 64/137 (46%), Gaps = 8/137 (5%)
Query: 14 ENMILNWKDEEGNTILHISALTKDSQAI-ELLVETKIDLKAKNLENSTALDIAVSD---- 68
E +LN +D +GNTILH++A + +A ELL ++ +N TALDI ++
Sbjct: 174 EIHVLNKRDRDGNTILHLAAYKNNHKAFKELLKCISLNRDIQNKGGMTALDILRTNGSHM 233
Query: 69 --EIETILSKAEEKHRSWVIIIVPTFADALRSKIAFVEKIIVSLLRIGNSISEEQRNXXX 126
+ E I+ + K + V T + LRS I FVE ++ R N +S+ RN
Sbjct: 234 NIKTEKIIRHSGGK-SGVSLSKVKTASVFLRSPITFVEYCSTTMTRYKNRMSDGTRNALL 292
Query: 127 XXXXXXXXXXYQAALSP 143
YQ A+ P
Sbjct: 293 VITALIITATYQTAVQP 309