Miyakogusa Predicted Gene

Lj0g3v0299889.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0299889.1 tr|G7ID28|G7ID28_MEDTR Multidrug resistance
protein ABC transporter family OS=Medicago truncatula
GN,79.55,0.000000000001, ,CUFF.20242.1
         (63 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G59140.1 | Symbols: ATMRP14, MRP14, ABCC10 | multidrug resist...    62   6e-11

>AT3G59140.1 | Symbols: ATMRP14, MRP14, ABCC10 | multidrug
            resistance-associated protein 14 | chr3:21863519-21868701
            REVERSE LENGTH=1453
          Length = 1453

 Score = 62.4 bits (150), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/45 (64%), Positives = 34/45 (75%), Gaps = 3/45 (6%)

Query: 21   CLIVFS---GKLVEYDEPMNLMKRECLLLGKLVKEYWSHFQSAES 62
            C +V S   G++VEYDEPM LMK E  L GKLVKEYWSH+ SA+S
Sbjct: 1408 CTMVLSISDGRIVEYDEPMKLMKDENSLFGKLVKEYWSHYNSADS 1452