Miyakogusa Predicted Gene

Lj0g3v0299789.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0299789.1 Non Chatacterized Hit- tr|A5AEG8|A5AEG8_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,39.16,3e-17,PRICHEXTENSN,NULL; seg,NULL,CUFF.20140.1
         (257 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G48920.1 | Symbols: TED7 | tracheary element differentiation-...    49   4e-06

>AT5G48920.1 | Symbols: TED7 | tracheary element
           differentiation-related 7 | chr5:19835405-19836022
           FORWARD LENGTH=205
          Length = 205

 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 34/44 (77%)

Query: 155 VIHFDEHKTVKETILPGPFGQKTVVITVEDDVHVDEEIRKNEEV 198
           +I FDEH  V+ETI+ GP G++T V+ +E+D+H+ E+I K E++
Sbjct: 134 IIEFDEHLKVQETIVQGPHGEQTRVVMLEEDIHLVEDIHKTEKL 177