Miyakogusa Predicted Gene

Lj0g3v0298659.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0298659.1 Non Chatacterized Hit- tr|J3M3D2|J3M3D2_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB05G1,79.17,0.0000000000004, ,CUFF.20056.1
         (130 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G22000.1 | Symbols:  | unknown protein; Has 30201 Blast hits ...   159   4e-40

>AT4G22000.1 | Symbols:  | unknown protein; Has 30201 Blast hits to
           17322 proteins in 780 species: Archae - 12; Bacteria -
           1396; Metazoa - 17338; Fungi - 3422; Plants - 5037;
           Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
           BLink). | chr4:11659810-11660202 REVERSE LENGTH=130
          Length = 130

 Score =  159 bits (403), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 75/94 (79%), Positives = 83/94 (88%)

Query: 16  YQYPWREKLAKYKDELAKGVWGYWELGAWKPLSISARRRAQLRKEVLLAGEDWPYDPERK 75
           +Q+PWR KL KY+ EL KGVWGYWE+GAWKPL ISARRRA LRKEVL  GEDWPYDPERK
Sbjct: 16  FQHPWRAKLDKYRTELTKGVWGYWEMGAWKPLGISARRRAMLRKEVLTNGEDWPYDPERK 75

Query: 76  EMKTKRKGHKCDRIAAEKRANTARLMEKMPEMLL 109
            M+TKRKGHKCDRI+AEKR NTA+LM KMP+MLL
Sbjct: 76  AMRTKRKGHKCDRISAEKRENTAKLMLKMPQMLL 109