Miyakogusa Predicted Gene

Lj0g3v0298129.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0298129.1 Non Chatacterized Hit- tr|D8SZ21|D8SZ21_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,36.42,1e-17,seg,NULL; Rhodanese,Rhodanese-like domain;
RHODANESE_3,Rhodanese-like domain; FAMILY NOT NAMED,NULL;,CUFF.20042.1
         (287 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G24750.1 | Symbols:  | Rhodanese/Cell cycle control phosphata...   409   e-114
AT3G08920.1 | Symbols:  | Rhodanese/Cell cycle control phosphata...    99   4e-21
AT2G42220.1 | Symbols:  | Rhodanese/Cell cycle control phosphata...    83   2e-16
AT4G27700.1 | Symbols:  | Rhodanese/Cell cycle control phosphata...    54   2e-07

>AT4G24750.1 | Symbols:  | Rhodanese/Cell cycle control phosphatase
           superfamily protein | chr4:12758422-12760749 REVERSE
           LENGTH=292
          Length = 292

 Score =  409 bits (1050), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 196/292 (67%), Positives = 233/292 (79%), Gaps = 5/292 (1%)

Query: 1   METLSFPI-NTLINSKANYI----SLTASTNYAXXXXXXXXXXXXXXXXCWKGVVRVQAE 55
           ME+LS P+ N L+ S +N      S   S+  +                   GVVR+QA 
Sbjct: 1   MESLSLPVLNPLLASGSNLFRNQHSRMTSSMVSSLKSPIGGTSLSTVRRFGVGVVRMQAV 60

Query: 56  SEDFELKQMRDMAAARKRWEALIRDGKVKVLTPREAGYAVQLSNKPLLDVRPSNEHYKAW 115
            ED +LKQMRD+AAA+KRW+ L+R+GKVK+LTPREAGYA+ LSNKPLLDVRPS+E  KAW
Sbjct: 61  DEDIDLKQMRDIAAAKKRWDGLLREGKVKLLTPREAGYAISLSNKPLLDVRPSSERNKAW 120

Query: 116 VRGSTWIPIFDVDHTLDAGTIPRKITNFVMGGWWSGMPTLSYESQFLAKVEEKFPKDTEL 175
           ++GSTW+PIFD D  LDAGT+ +K+T+F MGGWWSG PTLS+   FL+KVEEKFPKD+EL
Sbjct: 121 IKGSTWVPIFDNDDNLDAGTLSKKVTSFAMGGWWSGAPTLSFNRLFLSKVEEKFPKDSEL 180

Query: 176 IVACQKGLRSLAACELLYNAGYKNLFWVQGGLEAAEDEDLVVEGPVPLKFAGIGGVSEFL 235
           IVACQKGLRSLAACELLYNAGY+NLFWVQGGLE+A+DEDLV EG  PLK AGIGG SEFL
Sbjct: 181 IVACQKGLRSLAACELLYNAGYENLFWVQGGLESAQDEDLVTEGVQPLKLAGIGGFSEFL 240

Query: 236 GWTDQQRAAAAKEGWGYRLVFSARLLGILLAADALFIGAQQIGHYLQEIRTH 287
           GWTDQQRA AAKEGWGYRLV++ARL G++LAADALF+GAQQ+GHY+QE+R H
Sbjct: 241 GWTDQQRAQAAKEGWGYRLVYTARLFGVVLAADALFVGAQQLGHYIQELRGH 292


>AT3G08920.1 | Symbols:  | Rhodanese/Cell cycle control phosphatase
           superfamily protein | chr3:2712274-2713117 FORWARD
           LENGTH=214
          Length = 214

 Score = 99.0 bits (245), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 62/158 (39%), Positives = 87/158 (55%), Gaps = 2/158 (1%)

Query: 77  LIRDGKVKVLTPREAGYAVQLSNKPLLDVRPSNEHYKAWVRGSTWIPIFDVDHTLDAGTI 136
           LI  GKV+ + P+EA   V      LLDVRP+ E  KA V+GS  +P+F  D      T+
Sbjct: 39  LILSGKVRAVEPKEANAVVASEGYILLDVRPAWEREKARVKGSLHVPLFVEDPDNGPITL 98

Query: 137 PRKITNFVMGGWWSGMPTLSYESQFLAKVEEKFP-KDTELIVACQKGLRSLAACELLYNA 195
            +K  +    G W+G        +F  +V E  P K+++++V C +GLRSLAA   L+  
Sbjct: 99  LKKWIHLGYIGLWTGQRFTMINDEFALRVVEAVPDKESKVLVVCGEGLRSLAAVSKLHGE 158

Query: 196 GYKNLFWVQGGLEAAEDEDLV-VEGPVPLKFAGIGGVS 232
           GYK+L W+ GG     + D   +EG   L+FA IGGVS
Sbjct: 159 GYKSLGWLTGGFNRVSEGDFPEIEGTEELRFATIGGVS 196


>AT2G42220.1 | Symbols:  | Rhodanese/Cell cycle control phosphatase
           superfamily protein | chr2:17592105-17593305 FORWARD
           LENGTH=234
          Length = 234

 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 80/159 (50%)

Query: 73  RWEALIRDGKVKVLTPREAGYAVQLSNKPLLDVRPSNEHYKAWVRGSTWIPIFDVDHTLD 132
           R  +L    ++K +   EA   +      ++DVR   +  +A ++  + IP+F  +   D
Sbjct: 39  RRRSLRIAAELKFVNAEEAKQLIAEEGYSVVDVRDKTQFERAHIKSCSHIPLFIYNEDND 98

Query: 133 AGTIPRKITNFVMGGWWSGMPTLSYESQFLAKVEEKFPKDTELIVACQKGLRSLAACELL 192
            GTI ++  +    G + G+P      +FL  V  +F +D++L++ CQ+GLRS AA   L
Sbjct: 99  IGTIIKRTVHNNFSGLFFGLPFTKVNPEFLKSVRNEFSQDSKLLLVCQEGLRSAAAASRL 158

Query: 193 YNAGYKNLFWVQGGLEAAEDEDLVVEGPVPLKFAGIGGV 231
             AGY+N+  V  GL++ +       G   L+ AG  G+
Sbjct: 159 EEAGYENIACVTSGLQSVKPGTFESVGSTELQNAGKAGL 197


>AT4G27700.1 | Symbols:  | Rhodanese/Cell cycle control phosphatase
           superfamily protein | chr4:13826541-13827673 REVERSE
           LENGTH=224
          Length = 224

 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 19/162 (11%)

Query: 71  RKRWEALIRDGKVKVLTPREAGYAVQLSNKPLLDVRPSNEHYKAWVRGSTWIPIFDVDHT 130
           R++ E L+ + +V+ +  +EA    + +N  +LDVRP  E+      G+  + ++ +   
Sbjct: 63  RQKRELLL-EKRVRSVDVKEAQRLQKENNFVILDVRPEAEYKAGHPPGAINVEMYRLIRE 121

Query: 131 LDAGTIPRKITNFVMGGWWSGMPTLSYESQFLAKVEEKFPKDTELIVACQKG-------- 182
             A  I R++  F   G +SG        +F+  VE K  K+ ++IVAC           
Sbjct: 122 WTAWDIARRL-GFAFFGIFSGT---EENPEFIQSVEAKLDKEAKIIVACSSAGTMKPTQN 177

Query: 183 ------LRSLAACELLYNAGYKNLFWVQGGLEAAEDEDLVVE 218
                  RSL A  LL   GYKN+F ++GG+     E L VE
Sbjct: 178 LPEGQQSRSLIAAYLLVLNGYKNVFHLEGGIYTWGKEGLPVE 219