Miyakogusa Predicted Gene
- Lj0g3v0296709.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0296709.1 Non Chatacterized Hit- tr|I1MNU8|I1MNU8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.55987
PE,81.54,0,IF4E,Translation Initiation factor eIF- 4e; no
description,Translation Initiation factor eIF- 4e-lik,CUFF.19897.1
(130 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G18110.1 | Symbols: NCBP | novel cap-binding protein | chr5:5... 163 2e-41
AT4G18040.1 | Symbols: EIF4E, CUM1, AT.EIF4E1, eIF4E1 | eukaryot... 68 2e-12
AT5G35620.1 | Symbols: LSP1, EIF(ISO)4E, LSP, EIF4E2, eIFiso4E |... 58 2e-09
AT5G35620.2 | Symbols: LSP1, EIF(ISO)4E, LSP, EIF4E2, eIFiso4E |... 57 2e-09
AT1G29590.1 | Symbols: eIF4E3 | Eukaryotic initiation factor 4E ... 52 8e-08
AT1G29590.2 | Symbols: eIF4E3 | Eukaryotic initiation factor 4E ... 52 8e-08
AT1G29550.1 | Symbols: | Eukaryotic initiation factor 4E protei... 52 1e-07
>AT5G18110.1 | Symbols: NCBP | novel cap-binding protein |
chr5:5989105-5990588 REVERSE LENGTH=221
Length = 221
Score = 163 bits (413), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 75/114 (65%), Positives = 91/114 (79%), Gaps = 1/114 (0%)
Query: 17 NSEIADSPSQLAPDANNYCNEEAEERQARDLKAGLHPLKHKFVFWYTRRSPGVRTQTSYE 76
+ EI DS + + ++ + +EER++R+LK G HPL++KF WYTRR+PGVR Q SYE
Sbjct: 8 DDEIRDSGNMDSIKSHYVTDSVSEERRSRELKDGDHPLRYKFSIWYTRRTPGVRNQ-SYE 66
Query: 77 DNIKKIVDFSTVEGFWVCYCHLARPSTLPSPTDLHLFKEGIRPLWEDSANCNGG 130
DNIKK+V+FSTVEGFW CYCHLAR S LPSPTDLH FK+GIRPLWED ANCNGG
Sbjct: 67 DNIKKMVEFSTVEGFWACYCHLARSSLLPSPTDLHFFKDGIRPLWEDGANCNGG 120
>AT4G18040.1 | Symbols: EIF4E, CUM1, AT.EIF4E1, eIF4E1 | eukaryotic
translation initiation factor 4E |
chr4:10016724-10018151 REVERSE LENGTH=235
Length = 235
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 52 HPLKHKFVFWYTRRSPGVRT-QTSYEDNIKKIVDFSTVEGFWVCYCHLARPSTLPSPTDL 110
HPL+H + FW+ +P V++ QTS+ +++ + FSTVE FW Y ++ PS L D
Sbjct: 60 HPLEHSWTFWFD--NPAVKSKQTSWGSSLRPVFTFSTVEEFWSLYNNMKHPSKLAHGADF 117
Query: 111 HLFKEGIRPLWEDSANCNGG 130
+ FK I P WED NGG
Sbjct: 118 YCFKHIIEPKWEDPICANGG 137
>AT5G35620.1 | Symbols: LSP1, EIF(ISO)4E, LSP, EIF4E2, eIFiso4E |
Eukaryotic initiation factor 4E protein |
chr5:13824946-13826331 REVERSE LENGTH=198
Length = 198
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 27 LAPDANNYCNEEAEERQARDLKAGLHPLKHKFVFWYTRRSPGVRTQTSYEDNIKKIVDFS 86
+A D N A E A + + H L+ K+ FW+ +S + ++ +++K F
Sbjct: 1 MATDDVNEPLPAAAELPATEAEKQPHKLERKWSFWFDNQS---KKGAAWGASLRKAYTFD 57
Query: 87 TVEGFWVCYCHLARPSTLPSPTDLHLFKEGIRPLWEDSANCNGG 130
TVE FW + + + S L + ++HLFK G+ P WED NGG
Sbjct: 58 TVEDFWGLHETIFQTSKLTANAEIHLFKAGVEPKWEDPECANGG 101
>AT5G35620.2 | Symbols: LSP1, EIF(ISO)4E, LSP, EIF4E2, eIFiso4E |
Eukaryotic initiation factor 4E protein |
chr5:13825570-13826331 REVERSE LENGTH=167
Length = 167
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 27 LAPDANNYCNEEAEERQARDLKAGLHPLKHKFVFWYTRRSPGVRTQTSYEDNIKKIVDFS 86
+A D N A E A + + H L+ K+ FW+ +S + ++ +++K F
Sbjct: 1 MATDDVNEPLPAAAELPATEAEKQPHKLERKWSFWFDNQS---KKGAAWGASLRKAYTFD 57
Query: 87 TVEGFWVCYCHLARPSTLPSPTDLHLFKEGIRPLWEDSANCNGG 130
TVE FW + + + S L + ++HLFK G+ P WED NGG
Sbjct: 58 TVEDFWGLHETIFQTSKLTANAEIHLFKAGVEPKWEDPECANGG 101
>AT1G29590.1 | Symbols: eIF4E3 | Eukaryotic initiation factor 4E
protein | chr1:10339937-10341628 FORWARD LENGTH=285
Length = 285
Score = 52.4 bits (124), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 52 HPLKHKFVFWYTRRSPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSTLPSPTDLH 111
H ++ + FW+ S Q + +++ + F+T+E FW Y ++ P+ S +DL+
Sbjct: 110 HCFQNSWTFWFDNPSSK-SNQVIWGSSLRSLYTFATIEEFWSLYNNIHPPTKWVSGSDLY 168
Query: 112 LFKEGIRPLWEDSANCNGG 130
FK+ I P WED NGG
Sbjct: 169 CFKDKIEPKWEDPICANGG 187
>AT1G29590.2 | Symbols: eIF4E3 | Eukaryotic initiation factor 4E
protein | chr1:10340072-10342750 FORWARD LENGTH=300
Length = 300
Score = 52.4 bits (124), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 52 HPLKHKFVFWYTRRSPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSTLPSPTDLH 111
H ++ + FW+ S Q + +++ + F+T+E FW Y ++ P+ S +DL+
Sbjct: 65 HCFQNSWTFWFDNPSSK-SNQVIWGSSLRSLYTFATIEEFWSLYNNIHPPTKWVSGSDLY 123
Query: 112 LFKEGIRPLWEDSANCNGG 130
FK+ I P WED NGG
Sbjct: 124 CFKDKIEPKWEDPICANGG 142
>AT1G29550.1 | Symbols: | Eukaryotic initiation factor 4E protein |
chr1:10330514-10332094 FORWARD LENGTH=240
Length = 240
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 52 HPLKHKFVFWYTRRSPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSTLPSPTDLH 111
H ++ + FW+ S Q + +++ + F T+E FW Y ++ P+ S DL+
Sbjct: 65 HCFQNSWTFWFDNPSSK-SNQVIWGSSLRSLYTFGTIEEFWSLYNNIHPPTKWVSGADLY 123
Query: 112 LFKEGIRPLWEDSANCNGG 130
FK+ I P WED NGG
Sbjct: 124 CFKDKIEPKWEDPICANGG 142