Miyakogusa Predicted Gene
- Lj0g3v0295469.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0295469.1 tr|B9GR59|B9GR59_POPTR Predicted protein
(Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_409352
PE=4,24.84,3e-17,PPR,Pentatricopeptide repeat; PPR: pentatricopeptide
repeat domain,Pentatricopeptide repeat; no desc,CUFF.19782.1
(594 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 724 0.0
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 2e-68
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 4e-67
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 252 6e-67
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 4e-57
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 6e-52
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 5e-51
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 195 8e-50
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 1e-49
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 183 3e-46
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 170 2e-42
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 159 4e-39
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 1e-38
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 2e-38
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 9e-38
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 154 1e-37
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 2e-37
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 2e-36
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 4e-36
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 5e-36
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 8e-36
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 8e-36
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 149 8e-36
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 2e-35
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 2e-35
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 145 1e-34
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 1e-34
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 144 1e-34
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 2e-34
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 2e-34
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 142 6e-34
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 142 7e-34
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 8e-34
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 141 1e-33
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 3e-33
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 5e-33
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 1e-32
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 1e-32
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 137 2e-32
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 137 3e-32
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 5e-32
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 9e-32
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 135 1e-31
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 134 1e-31
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 134 3e-31
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 3e-31
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 3e-31
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 4e-31
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 4e-31
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 5e-31
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 7e-31
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 132 7e-31
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 131 1e-30
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 2e-30
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 3e-30
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 3e-30
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 4e-30
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 5e-30
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 129 5e-30
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 129 5e-30
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 5e-30
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 1e-29
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 1e-29
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 2e-29
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 2e-29
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 3e-29
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 126 5e-29
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 1e-28
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 2e-28
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 4e-28
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 4e-28
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 6e-28
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 122 9e-28
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 1e-27
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 3e-27
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 120 3e-27
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 4e-27
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 4e-27
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 119 5e-27
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 6e-27
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 6e-27
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 119 7e-27
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 9e-27
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 118 1e-26
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 2e-26
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 3e-26
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 117 3e-26
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 116 5e-26
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 7e-26
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 8e-26
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 8e-26
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 1e-25
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 115 1e-25
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 1e-25
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 115 1e-25
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 3e-25
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 114 3e-25
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 6e-25
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 6e-25
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 1e-24
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 1e-24
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 2e-24
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 3e-24
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 4e-24
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 2e-23
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 3e-23
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 3e-23
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 107 3e-23
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 4e-23
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 4e-23
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 5e-23
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 106 6e-23
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 106 6e-23
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 7e-23
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 7e-23
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 5e-22
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 99 7e-21
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 99 1e-20
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 96 6e-20
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 96 7e-20
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 7e-20
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 2e-19
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 95 2e-19
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 2e-19
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 94 2e-19
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 7e-19
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 8e-19
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 9e-19
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 5e-18
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 6e-18
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 6e-18
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 8e-18
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 89 1e-17
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 88 2e-17
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 8e-17
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 8e-17
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 86 9e-17
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 4e-16
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 83 4e-16
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 7e-16
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 7e-16
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 6e-15
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 1e-14
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 78 1e-14
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 77 2e-14
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 77 3e-14
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 77 3e-14
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 4e-14
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 77 4e-14
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 75 1e-13
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 74 2e-13
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 74 2e-13
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 74 4e-13
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 7e-13
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 2e-11
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 66 6e-11
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 66 8e-11
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 1e-09
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 62 2e-09
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 61 2e-09
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 3e-09
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 60 4e-09
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 60 4e-09
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 59 7e-09
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 9e-09
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 58 2e-08
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 58 2e-08
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 57 4e-08
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 56 6e-08
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 9e-08
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 55 1e-07
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 2e-07
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 3e-07
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 7e-07
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 52 9e-07
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 1e-06
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 2e-06
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 51 2e-06
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 51 2e-06
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 51 2e-06
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 51 2e-06
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 51 2e-06
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 51 3e-06
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 50 3e-06
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 49 8e-06
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-06
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 8e-06
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 724 bits (1870), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/559 (61%), Positives = 443/559 (79%), Gaps = 15/559 (2%)
Query: 45 SRFSVFHYSSTYSQIIPL-SYASSNPLIQSSFPMNSSVAYHFSMRCYCSETVPXXXXXXX 103
SRFS+ H S+T Q L S+ S+ L S +N ++ FS+ +CS T+
Sbjct: 12 SRFSL-HLSTTPPQRSALFSHILSSHL--DSIQINKKIS-SFSVHRFCSTTLLNPELEIT 67
Query: 104 XXDFGSGMSNVVQLDSD----------VDKVCNTMMDNLHGFNNLEKALDQLAIPLSTPL 153
+ S ++V + + V + +M NL+ ++++EKALD+ ++ L+TP+
Sbjct: 68 RIEKVSEDQSLVYCNENDIRTKGSNHAVGILHEAIMANLNAYDDMEKALDESSVDLTTPV 127
Query: 154 VTGVLHRLRYDEKIAFRFFTWAGNQENYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLD 213
V +L RL+Y+EK AFRFFTWAG+QE+YSHEP AYN+M+DILSSTKYK KQFRIV DMLD
Sbjct: 128 VCKILQRLQYEEKTAFRFFTWAGHQEHYSHEPIAYNEMIDILSSTKYKNKQFRIVIDMLD 187
Query: 214 YMKRKNKSTVPVEVLMTILRKYTEKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKC 273
YMKR NK+ V V+VL+ ILRKY E+YLTHVQKFAK+KRIRVKTQPEINAFN+LLDALCKC
Sbjct: 188 YMKRNNKTVVLVDVLLEILRKYCERYLTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKC 247
Query: 274 CLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYN 333
LV+ E L ++MR + +A T+N+L FGWCRVR P + MKLLEEMI+ GH+P+NFTY
Sbjct: 248 GLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYC 307
Query: 334 TALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYM 393
A+DT+C+AGM+ EA DLF+FM TKGS +S+PTAKT+A+MIV LA+ND+ EECF+L+G M
Sbjct: 308 AAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRM 367
Query: 394 ISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKS 453
IS+GCLPDV+TYKD+IEG+C+ K+DEAYKFL+EM NKGYPPDIVTYNCFLRVLC+N+K+
Sbjct: 368 ISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKT 427
Query: 454 EEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVM 513
+EALKLYGRM+E RC PSVQTYNMLISMFFEMDDPDGAF TW EM+KR C D +TYC M
Sbjct: 428 DEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAM 487
Query: 514 IEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMRKFYN 573
I GLF+C++ +EAC LLEEV+NKG+KLPY+ FDSFL++LS++G+L AIHK+S+HM+KFYN
Sbjct: 488 INGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSEHMKKFYN 547
Query: 574 PAMARRYAISQKRKSISLR 592
+MARR+A+S+KRKS LR
Sbjct: 548 HSMARRFALSEKRKSTKLR 566
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 165/561 (29%), Positives = 279/561 (49%), Gaps = 31/561 (5%)
Query: 39 ETTLQSSRFSVFHYSSTYS--QIIPLSYASSNPLIQSSFPMNSSVAYHFSMRCYCSETVP 96
E + FS +SSTY + IPL + SS L+ +S + ++ C E V
Sbjct: 50 EVRFSGALFSRMIHSSTYHPYRQIPLPH-SSVQLLDASLGCRGFSSGSSNVSDGCDEEVE 108
Query: 97 XXXXXXXXXDFGSGMSNVVQLDS--DVDKVCNTMMDNLHGFN-NLEKALDQLAIPLSTPL 153
D +G+S V + +V++VC ++D L + N+E LD++ + LS L
Sbjct: 109 SECDN----DEETGVSCVESSTNPEEVERVCK-VIDELFALDRNMEAVLDEMKLDLSHDL 163
Query: 154 VTGVLHRLRYDEKIAFRFFTWAGNQENYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLD 213
+ VL R R+ K AFRFF WA ++ ++H+ YN MM IL+ K +QF + +L+
Sbjct: 164 IVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILA----KTRQFETMVSVLE 219
Query: 214 YMKRKNKSTVPVEVLMTILRKYT----EKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDA 269
M K + +E ++ + K + + KK + ++ + N LLD+
Sbjct: 220 EMG--TKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIG----VETINCLLDS 273
Query: 270 LCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDN 329
L + L + A+ L+ K+++ N TY +L+ GWCRVR+ ++ +MI G +PD
Sbjct: 274 LGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDI 333
Query: 330 FTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKL 389
+N L+ ++ ++A+ LF M++KG P ++Y IMI + ME +
Sbjct: 334 VAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPC---PNVRSYTIMIRDFCKQSSMETAIEY 390
Query: 390 MGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCD 449
M+ SG PD Y +I G K+D Y+ L+EM KG+PPD TYN ++++ +
Sbjct: 391 FDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMAN 450
Query: 450 NKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDT 509
K E A ++Y +MI+ PS+ T+NM++ +F + + W+EM K+G D ++
Sbjct: 451 QKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNS 510
Query: 510 YCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMR 569
Y V+I GL K+ EAC LEE+++KG+K P ++ F G +L+ +
Sbjct: 511 YTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAK 570
Query: 570 ---KFYNPAMARRYAISQKRK 587
KF + R+A +R+
Sbjct: 571 FSGKFAAAEIFARWAQMTRRR 591
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 164/561 (29%), Positives = 277/561 (49%), Gaps = 31/561 (5%)
Query: 39 ETTLQSSRFSVFHYSSTYS--QIIPLSYASSNPLIQSSFPMNSSVAYHFSMRCYCSETVP 96
E + FS +SSTY + IPL + SS L+ +S + ++ C E V
Sbjct: 50 EVRFSGALFSRMIHSSTYHPYRQIPLPH-SSVQLLDASLGCRGFSSGSSNVSDGCDEEVE 108
Query: 97 XXXXXXXXXDFGSGMSNVVQLDS--DVDKVCNTMMDNLHGFN-NLEKALDQLAIPLSTPL 153
D +G+S V + +V++VC ++D L + N+E LD++ + LS L
Sbjct: 109 SECDN----DEETGVSCVESSTNPEEVERVCK-VIDELFALDRNMEAVLDEMKLDLSHDL 163
Query: 154 VTGVLHRLRYDEKIAFRFFTWAGNQENYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLD 213
+ VL R R+ K AFRFF WA ++ ++H YN MM IL+ K +QF + +L+
Sbjct: 164 IVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILA----KTRQFETMVSVLE 219
Query: 214 YMKRKNKSTVPVEVLMTILRKYT----EKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDA 269
M K + +E ++ + K + + KK + ++ + N LLD+
Sbjct: 220 EMG--TKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIG----VETINCLLDS 273
Query: 270 LCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDN 329
L + L + A+ L+ K+++ N TY +L+ GWCRVR+ ++ +MI G +PD
Sbjct: 274 LGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDI 333
Query: 330 FTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKL 389
+N L+ ++ ++A+ LF M++KG P ++Y IMI + ME +
Sbjct: 334 VAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC---PNVRSYTIMIRDFCKQSSMETAIEY 390
Query: 390 MGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCD 449
M+ SG PD Y +I G K+D Y+ L+EM KG+PPD TYN ++++ +
Sbjct: 391 FDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMAN 450
Query: 450 NKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDT 509
K E ++Y +MI+ PS+ T+NM++ +F + + W EM K+G D ++
Sbjct: 451 QKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNS 510
Query: 510 YCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMR 569
Y V+I GL + K+ EAC LEE+++KG+K P ++ F G +L+ +
Sbjct: 511 YTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAK 570
Query: 570 ---KFYNPAMARRYAISQKRK 587
KF + R+A +R+
Sbjct: 571 FSGKFAAAEIFARWAQMTRRR 591
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 252 bits (643), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 160/559 (28%), Positives = 273/559 (48%), Gaps = 28/559 (5%)
Query: 39 ETTLQSSRFSVFHYSSTYSQIIPLSYASSNPLIQSSFPMNSSVAYHFSMRCYCSETVPXX 98
E + FS +SSTY + S L+ +S + ++ C E V
Sbjct: 50 EVRFSGALFSRMIHSSTYHPYRQIPLPHSVQLLDASLGCRGFSSGSSNVSDGCDEEVESE 109
Query: 99 XXXXXXXDFGSGMSNVVQLDS--DVDKVCNTMMDNLHGFN-NLEKALDQLAIPLSTPLVT 155
D +G+S V + +V++VC ++D L + N+E LD++ + LS L+
Sbjct: 110 CDN----DEETGVSCVESSTNPEEVERVCK-VIDELFALDRNMEAVLDEMKLDLSHDLIV 164
Query: 156 GVLHRLRYDEKIAFRFFTWAGNQENYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYM 215
VL R R+ K AFRFF WA ++ ++H+ YN MM IL+ K +QF + +L+ M
Sbjct: 165 EVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILA----KTRQFETMVSVLEEM 220
Query: 216 KRKNKSTVPVEVLMTILRKYT----EKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALC 271
K + +E ++ + K + + KK + ++ + N LLD+L
Sbjct: 221 G--TKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIG----VETINCLLDSLG 274
Query: 272 KCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFT 331
+ L + A+ L+ K+++ N TY +L+ GWCRVR+ ++ +MI G +PD
Sbjct: 275 RAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVA 334
Query: 332 YNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMG 391
+N L+ ++ ++A+ LF M++KG P ++Y IMI + ME +
Sbjct: 335 HNVMLEGLLRSMKKSDAIKLFHVMKSKGPC---PNVRSYTIMIRDFCKQSSMETAIEYFD 391
Query: 392 YMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNK 451
M+ SG PD Y +I G K+D Y+ L+EM KG+PPD TYN ++++ + K
Sbjct: 392 DMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQK 451
Query: 452 KSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYC 511
E ++Y +MI+ PS+ T+NM++ +F + + W EM K+G D ++Y
Sbjct: 452 MPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYT 511
Query: 512 VMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMR-- 569
V+I GL + K+ EAC LEE+++KG+K P ++ F G +L+ +
Sbjct: 512 VLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFS 571
Query: 570 -KFYNPAMARRYAISQKRK 587
KF + R+A +R+
Sbjct: 572 GKFAAAEIFARWAQMTRRR 590
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 219 bits (558), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 127/402 (31%), Positives = 214/402 (53%), Gaps = 10/402 (2%)
Query: 138 LEKALDQLAIPLSTPLVTGVLHRLRYDEKIAFRFFTWAGNQENYSHEPCAYNDMMDILSS 197
L+ ALDQ + +S +V VL+R R + +RFF W+ Q +Y H AY+ M++
Sbjct: 87 LDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIE---- 142
Query: 198 TKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEKYLTHVQKFAKKKRIRVKTQ 257
+ K++Q++++ D+++ M++K + VE ++RKY +A +
Sbjct: 143 STAKIRQYKLMWDLINAMRKKK--MLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLP 200
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLL 317
P + AFN LL ALCK V A+ +++ MR +++TY+IL+ GW + + + ++
Sbjct: 201 PNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVF 260
Query: 318 EEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTL 377
EMI G PD TY+ +D CKAG + EA+ + +R+ +I PT Y++++ T
Sbjct: 261 REMIDAGCHPDIVTYSIMVDILCKAGRVDEALGI---VRSMDPSICKPTTFIYSVLVHTY 317
Query: 378 AQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDI 437
+R+EE M SG DV + +I C ++ Y+ L+EM +KG P+
Sbjct: 318 GTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNS 377
Query: 438 VTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQE 497
+ N LR L + + +EA ++ +MI++ C P TY M+I MF E + + A + W+
Sbjct: 378 KSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWKY 436
Query: 498 MEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
M K+G T+ V+I GL T++AC LLEE+I GI+
Sbjct: 437 MRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIR 478
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 111/234 (47%), Gaps = 5/234 (2%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMK 315
P+I +++++D LCK V+ A G+ + M I Y++LV + +
Sbjct: 269 HPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVD 328
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
EM + G + D +N+ + +CKA + + + M++KG T P +K+ I++
Sbjct: 329 TFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVT---PNSKSCNIILR 385
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
L + +E F + MI C PD TY +I+ C +++ A K + M KG P
Sbjct: 386 HLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFP 444
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPD 489
+ T++ + LC+ + +++A L MIE+ PS T+ L + + + D
Sbjct: 445 SMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEERED 498
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 139/335 (41%), Gaps = 40/335 (11%)
Query: 223 VPVEVLMTILRKYTEKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGL 282
V EV+ +L ++ L + F ++ R + + A+++++++ K + L
Sbjct: 98 VSQEVVEDVLNRFRNAGLLTYRFFQWSEKQR-HYEHSVRAYHMMIESTAKIRQYKLMWDL 156
Query: 283 YKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKA 342
MRK N ET+ I++ + R + + M + P+ +N L CK+
Sbjct: 157 INAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKS 216
Query: 343 GMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDV 402
+ +A ++FE MR + + PD
Sbjct: 217 KNVRKAQEVFENMRDRFT---------------------------------------PDS 237
Query: 403 TTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGR 462
TY ++EG + +A + EM + G PDIVTY+ + +LC + +EAL +
Sbjct: 238 KTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRS 297
Query: 463 MIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNK 522
M C P+ Y++L+ + + + A +T+ EME+ G D + +I N+
Sbjct: 298 MDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANR 357
Query: 523 TEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGD 557
+ +L+E+ +KG+ K + L L + G+
Sbjct: 358 MKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGE 392
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/239 (19%), Positives = 98/239 (41%), Gaps = 5/239 (2%)
Query: 331 TYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLM 390
Y+ +++ K DL MR K +T+ I++ A+ +++E
Sbjct: 136 AYHMMIESTAKIRQYKLMWDLINAMRKKKML----NVETFCIVMRKYARAQKVDEAIYAF 191
Query: 391 GYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDN 450
M P++ + ++ +C + +A + E M ++ + PD TY+ L
Sbjct: 192 NVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSILLEGWGKE 250
Query: 451 KKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTY 510
+A +++ MI+ C P + TY++++ + + D A + M+ C T Y
Sbjct: 251 PNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIY 310
Query: 511 CVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMR 569
V++ N+ EEA E+ G+K F+S + + ++++ M+
Sbjct: 311 SVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMK 369
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 202 bits (513), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 126/423 (29%), Positives = 203/423 (47%), Gaps = 7/423 (1%)
Query: 116 QLDSDVDKVCNTMMDNLHGFNNLEKALDQLAIPLSTPLVTGVLHRLRYDEKIAFRFFTWA 175
+ SDV+K + LE AL++ + L L+ VL+R + +RFF WA
Sbjct: 78 EFASDVEKSYRILRKFHSRVPKLELALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWA 137
Query: 176 GNQENYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKY 235
Q Y H Y M+ ILS K++QF V +++ M+++N + E+ + +++++
Sbjct: 138 AKQPRYCHSIEVYKSMVKILS----KMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRF 193
Query: 236 TEKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAE 295
+ + + +P+ F LLDALCK V+ A L++ MR N
Sbjct: 194 ASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLR 253
Query: 296 TYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFM 355
+ L++GWCRV +L +M + G PD Y L Y AG + +A DL M
Sbjct: 254 YFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDM 313
Query: 356 RTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLC 415
R +G P A Y ++I L + DRMEE K+ M C DV TY ++ G C
Sbjct: 314 RRRGF---EPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKW 370
Query: 416 GKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTY 475
GKID+ Y L++M KG P +TY + + EE L+L +M ++ P + Y
Sbjct: 371 GKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIY 430
Query: 476 NMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVIN 535
N++I + ++ + A W EME+ G + DT+ +MI GL + EA +E++
Sbjct: 431 NVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVT 490
Query: 536 KGI 538
+G+
Sbjct: 491 RGL 493
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 199 bits (506), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 135/453 (29%), Positives = 221/453 (48%), Gaps = 11/453 (2%)
Query: 121 VDKVCNTMMDNLHGFNNLEKALDQLAIPLSTPLVTGVLHRLRYDEKIAFRFFTWAGNQEN 180
V+++ + D+ + ++LE L + +S+ LV VL R + A RFF WA +
Sbjct: 38 VNEISRVLSDHRNPKDDLEHTLVAYSPRVSSNLVEQVLKRCKNLGFPAHRFFLWARRIPD 97
Query: 181 YSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEKYL 240
++H +Y+ +++IL S+K QF ++ D L + N + +V + R Y+ L
Sbjct: 98 FAHSLESYHILVEILGSSK----QFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANL 153
Query: 241 THVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNI 299
A + + +P ++ + LL +LC V +A+ + K + I +A+TY+I
Sbjct: 154 PSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSI 213
Query: 300 LVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKG 359
LV GW R+R + K+ +EM++ D YN LD CK+G + +F+ M G
Sbjct: 214 LVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEM---G 270
Query: 360 STISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKID 419
+ P A ++AI I + +K++ M +P+V T+ II+ +C K+D
Sbjct: 271 NLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVD 330
Query: 420 EAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLI 479
+AY L+EM KG PD TYN + CD+ + A KL RM +C+P TYNM++
Sbjct: 331 DAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVL 390
Query: 480 SMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLF-NCNKTEEACSLLEEVINKGI 538
+ + D A E W+ M +R TY VMI GL K EEAC E +I++GI
Sbjct: 391 KLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGI 450
Query: 539 KLPYKKFDSFLI-QLSDLGDLHAIHKLSDHMRK 570
PY L +L G + + L+ M +
Sbjct: 451 P-PYSTTVEMLRNRLVGWGQMDVVDVLAGKMER 482
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%)
Query: 420 EAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLI 479
EA + M G P + + L LCD K A + +G+ +PS +TY++L+
Sbjct: 156 EACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILV 215
Query: 480 SMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
+ + D GA + + EM +R C +D Y +++ L + + +E+ N G+K
Sbjct: 216 RGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLK 275
Query: 540 LPYKKFDSFLIQLSDLGDLHAIHKLSDHMRKF 571
F F+ D GD+H+ +K+ D M+++
Sbjct: 276 PDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRY 307
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 195 bits (495), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 141/478 (29%), Positives = 236/478 (49%), Gaps = 19/478 (3%)
Query: 106 DFGSGMSNVVQLDSDVDKVCNTMMDNLHGFNNLEKALDQLAIPLSTPLVTGVLHRLRYDE 165
D G +S+ + + DV K+ + D L L++ + S LV +L R+R D
Sbjct: 83 DLGCSISDEL-VSEDVGKISKLVKDCGSDRKELRNKLEECDVKPSNELVVEILSRVRNDW 141
Query: 166 KIAFRFFTWAGNQENYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPV 225
+ AF FF WAG Q+ Y Y+ M+ IL K+++F ++D M++ + S V
Sbjct: 142 ETAFTFFVWAGKQQGYVRSVREYHSMISILG----KMRKFDTAWTLIDEMRKFSPSLVNS 197
Query: 226 EVLMTILRKY--TEKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLY 283
+ L+ ++RKY + F KR +++ I+ F LL ALC+ V A L
Sbjct: 198 QTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMG--IDDFQSLLSALCRYKNVSDAGHLI 255
Query: 284 KKMRKIINTNAETYNILVFGWCRV-RSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKA 342
+ +A+++NI++ GWC V SP ++ EM +G + D +Y++ + Y K
Sbjct: 256 FCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKG 315
Query: 343 GMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISS-GCLPD 401
G + + + LF+ M+ + P K Y ++ LA+ + E LM M G P+
Sbjct: 316 GSLNKVLKLFDRMKKE---CIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPN 372
Query: 402 VTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYG 461
V TY +I+ +C K +EA + +EM KG P I TY+ F+R+L + EE +L
Sbjct: 373 VVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL---RTGEEVFELLA 429
Query: 462 RMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCN 521
+M ++ C P+V+TY MLI D D W EM+++ D +Y VMI GLF
Sbjct: 430 KMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNG 489
Query: 522 KTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMRKFYNPAMARR 579
K EEA +E+ +KG++ P + + +IQ G +A +++D + A+ ++
Sbjct: 490 KIEEAYGYYKEMKDKGMR-PNENVED-MIQSWFSGKQYAEQRITDSKGEVNKGAIVKK 545
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/424 (28%), Positives = 203/424 (47%), Gaps = 8/424 (1%)
Query: 116 QLDSDVDKVCNTMMDNLHGFNNLEKALDQLAIPLSTPLVTGVLHRLRYDEKIAFRFFTWA 175
+ +V+K+ + ++ LE AL++ I L L+ VL R + +RFF WA
Sbjct: 62 EFAGEVEKIYRILRNHHSRVPKLELALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWA 121
Query: 176 GNQENYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKY 235
Q Y H M+ ILS K++QF V +++ M++ N + E+ + ++R++
Sbjct: 122 TKQPGYFHSYEVCKSMVMILS----KMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRF 177
Query: 236 TEKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAE 295
+ + + +P+ F LLDALCK V+ A +++ MR+ N
Sbjct: 178 ASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLR 237
Query: 296 TYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFM 355
+ L++GWCR ++L +M + G PD + L Y AG + +A DL M
Sbjct: 238 YFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDM 297
Query: 356 RTKGSTISSPTAKTYAIMIVTLAQND-RMEECFKLMGYMISSGCLPDVTTYKDIIEGVCL 414
R +G P Y ++I L + + RM+E ++ M GC D+ TY +I G C
Sbjct: 298 RKRGF---EPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCK 354
Query: 415 CGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQT 474
G ID+ Y L++M KG P VTY + ++ EE L+L +M C P +
Sbjct: 355 WGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLI 414
Query: 475 YNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVI 534
YN++I + ++ + A W EME G + DT+ +MI G + EAC+ +E++
Sbjct: 415 YNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMV 474
Query: 535 NKGI 538
++GI
Sbjct: 475 SRGI 478
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 123/426 (28%), Positives = 207/426 (48%), Gaps = 16/426 (3%)
Query: 120 DVDKVCNTMMDNLHGFNNLEKALDQLAIPLSTPLVTGVLHRLRYDEKIAFRFFTWAGNQE 179
D+DKVC+ + ++ K L + + ++ LV VL R A+ FF WA +Q
Sbjct: 101 DIDKVCDFLNKKDTSHEDVVKELSKCDVVVTESLVLQVLRRFSNGWNQAYGFFIWANSQT 160
Query: 180 NYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKST-VPVEVLMTILRKYTE- 237
Y H YN M+D+L K + F ++ ++++ M + +S V ++ + ++R+ +
Sbjct: 161 GYVHSGHTYNAMVDVLG----KCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKS 216
Query: 238 -KYLTHVQKFAK-KKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAE 295
KY V F + +K VKT + A N L+DAL K +E+A ++ K+ I +A
Sbjct: 217 GKYNKAVDAFLEMEKSYGVKT--DTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDAR 274
Query: 296 TYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFM 355
T+NIL+ G+C+ R +++ M PD TY + ++ YCK G ++ E M
Sbjct: 275 TFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEM 334
Query: 356 RTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLC 415
R G +P TY I++ +L ++ ++ E + M GC+PD Y +I +
Sbjct: 335 RENG---CNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKT 391
Query: 416 GKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELR---CIPSV 472
G+ +A + E+M N+G D++ YN + + + E AL+L RM + C P+V
Sbjct: 392 GRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNV 451
Query: 473 QTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEE 532
+TY L+ M M K ++D TY ++I GL K EEAC EE
Sbjct: 452 ETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEE 511
Query: 533 VINKGI 538
+ KG+
Sbjct: 512 AVRKGM 517
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 111/258 (43%), Gaps = 23/258 (8%)
Query: 293 NAETYNILV--FGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDT-------YCKAG 343
+ TYN +V G CR L+ E++ ++ + T LDT K+G
Sbjct: 165 SGHTYNAMVDVLGKCR------NFDLMWELVNEMNKNEESKLVT-LDTMSKVMRRLAKSG 217
Query: 344 MITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQN--DRMEECFKLMGYMISSGCLPD 401
+AVD F M K + + T ++M + +N + E F + I PD
Sbjct: 218 KYNKAVDAFLEME-KSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIK----PD 272
Query: 402 VTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYG 461
T+ +I G C K D+A ++ M + PD+VTY F+ C ++
Sbjct: 273 ARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLE 332
Query: 462 RMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCN 521
M E C P+V TY +++ + A +++M++ GC D Y +I L
Sbjct: 333 EMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTG 392
Query: 522 KTEEACSLLEEVINKGIK 539
+ ++A + E++ N+G++
Sbjct: 393 RFKDAAEIFEDMTNQGVR 410
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 1/203 (0%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKL 316
P + + +++ +L K V A G+Y+KM++ +A+ Y+ L+ + ++
Sbjct: 341 PNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEI 400
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
E+M G R D YNT + A+ L + M + SP +TYA ++
Sbjct: 401 FEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKM 460
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
+M+ L+ +M+ + DV+TY +I G+C+ GK++EA F EE KG P
Sbjct: 461 CCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPR 520
Query: 437 IVTYNCFLRVLCDNKKSEEALKL 459
T + L +E LK+
Sbjct: 521 DSTCKMLVDELEKKNMAEAKLKI 543
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/457 (27%), Positives = 213/457 (46%), Gaps = 22/457 (4%)
Query: 120 DVDKVCNTMMDNLHGFNNLEKALDQLAIPLSTPLVTGVLHRLRYDEKIAFRFFTWAGNQE 179
D +++C + + +E L++ ++ LS L+ VL +L +A F WA NQ+
Sbjct: 65 DAERICKILTKFTD--SKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQK 122
Query: 180 NYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTE-- 237
+ H YN +++ L K+KQF+++ ++D MK K + E I R+Y
Sbjct: 123 GFKHTTSNYNALIESLG----KIKQFKLIWSLVDDMK--AKKLLSKETFALISRRYARAR 176
Query: 238 KYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAET 296
K + F K + K E + FN +LD L K V A+ ++ KM+K + ++
Sbjct: 177 KVKEAIGAFHKMEEFGFKM--ESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKS 234
Query: 297 YNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMR 356
Y IL+ GW + + R ++ EM G PD Y ++ +CKA EA+ F M
Sbjct: 235 YTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEME 294
Query: 357 TKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCG 416
+ P+ + +I L ++ + + SSG + TY ++ C
Sbjct: 295 QRNC---KPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQ 351
Query: 417 KIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYN 476
++++AYK ++EM KG P+ TY+ L L ++S+EA ++Y M C P+V TY
Sbjct: 352 RMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYE 408
Query: 477 MLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINK 536
+++ MF + D A + W EM+ +G + +I L + NK +EAC E+++
Sbjct: 409 IMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDV 468
Query: 537 GIKLPYKKFDSFLIQLSDLGDLHAIHKLS---DHMRK 570
GI+ P F L D G + L D +RK
Sbjct: 469 GIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMDRLRK 505
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 158/299 (52%), Gaps = 5/299 (1%)
Query: 262 AFNLLLDALCKCCLVEYAEGLYKKM--RKIINTNAETYNILVFGWCRVRSPTRGMKLLEE 319
+ N+++ CK VE A ++M + + T+N LV G C+ +++++
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320
Query: 320 MIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQ 379
M+Q G+ PD +TYN+ + CK G + EAV++ + M T+ SP TY +I TL +
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDC---SPNTVTYNTLISTLCK 377
Query: 380 NDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVT 439
+++EE +L + S G LPDV T+ +I+G+CL A + EEM +KG PD T
Sbjct: 378 ENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFT 437
Query: 440 YNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEME 499
YN + LC K +EAL + +M C SV TYN LI F + + A E + EME
Sbjct: 438 YNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEME 497
Query: 500 KRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDL 558
G + ++ TY +I+GL + E+A L++++I +G K ++S L GD+
Sbjct: 498 VHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDI 556
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 146/319 (45%), Gaps = 39/319 (12%)
Query: 258 PEINAFNLLLDALCKCCLVEYA-EGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKL 316
P+ FN L++ LCK V++A E + +++ + + TYN ++ G C++ +++
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEA---------------------------- 348
L++MI P+ TYNT + T CK + EA
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412
Query: 349 -------VDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPD 401
++LFE MR+KG P TY ++I +L +++E ++ M SGC
Sbjct: 413 TRNHRVAMELFEEMRSKGC---EPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARS 469
Query: 402 VTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYG 461
V TY +I+G C K EA + +EM G + VTYN + LC +++ E+A +L
Sbjct: 470 VITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMD 529
Query: 462 RMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCN 521
+MI P TYN L++ F D A + Q M GC D TY +I GL
Sbjct: 530 QMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAG 589
Query: 522 KTEEACSLLEEVINKGIKL 540
+ E A LL + KGI L
Sbjct: 590 RVEVASKLLRSIQMKGINL 608
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 160/342 (46%), Gaps = 11/342 (3%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKL 316
P +N L+ LCK VE A L + + K I + T+N L+ G C R+ M+L
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
EEM G PD FTYN +D+ C G + EA+++ + M G S TY +I
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARS---VITYNTLIDG 479
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
+ ++ E ++ M G + TY +I+G+C ++++A + +++M +G PD
Sbjct: 480 FCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPD 539
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQ 496
TYN L C ++A + M C P + TY LIS + + A + +
Sbjct: 540 KYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLR 599
Query: 497 EMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDL- 555
++ +G NL Y +I+GLF KT EA +L E++ + P S+ I L
Sbjct: 600 SIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAV--SYRIVFRGLC 657
Query: 556 ---GDL-HAIHKLSDHMRKFYNPAMARRYAISQKRKSISLRE 593
G + A+ L + + K + P + Y +++ ++S+ E
Sbjct: 658 NGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEE 699
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 176/411 (42%), Gaps = 44/411 (10%)
Query: 160 RLRYDEKIAFRFFTWAGNQENYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKN 219
R + D+ A R F A + N+S EP Y +++ L + +I+ DM + +
Sbjct: 58 RSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDM-----KSS 112
Query: 220 KSTVPVEVLMTILRKYTEKYLT-HVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEY 278
+ + + ++ Y + L + +P+ + +N +L+ L ++
Sbjct: 113 RCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKL 172
Query: 279 AEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALD 337
E + KM I + T+N+L+ CR + +LE+M G PD T+ T +
Sbjct: 173 VEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQ 232
Query: 338 TY-----------------------------------CKAGMITEAVDLFEFMRTKGSTI 362
Y CK G + +A++ + M +
Sbjct: 233 GYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF 292
Query: 363 SSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAY 422
P T+ ++ L + ++ ++M M+ G PDV TY +I G+C G++ EA
Sbjct: 293 --PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAV 350
Query: 423 KFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMF 482
+ L++M + P+ VTYN + LC + EEA +L + +P V T+N LI
Sbjct: 351 EVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 410
Query: 483 FEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEV 533
+ A E ++EM +GC D TY ++I+ L + K +EA ++L+++
Sbjct: 411 CLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM 461
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 135/289 (46%), Gaps = 16/289 (5%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKM------RKIINTNAETYNILVFGWCRVRSP 310
+P+ +N+L+D+LC ++ A + K+M R +I TYN L+ G+C+
Sbjct: 432 EPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVI-----TYNTLIDGFCKANKT 486
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
++ +EM G ++ TYNT +D CK+ + +A L + M +G P TY
Sbjct: 487 REAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG---QKPDKYTY 543
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGN 430
++ + +++ ++ M S+GC PD+ TY +I G+C G+++ A K L +
Sbjct: 544 NSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQM 603
Query: 431 KGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIEL-RCIPSVQTYNMLISMFFEMDDP- 488
KG YN ++ L +K+ EA+ L+ M+E P +Y ++ P
Sbjct: 604 KGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPI 663
Query: 489 DGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKG 537
A + E+ ++G + + ++ EGL + E L+ V+ K
Sbjct: 664 REAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKA 712
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 162/322 (50%), Gaps = 4/322 (1%)
Query: 250 KRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVR 308
K + + +P+I A+N ++D+LCK V A +K++ RK I N TY LV G C
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS 239
Query: 309 SPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAK 368
+ +LL +MI+ P+ TY+ LD + K G + EA +LFE M P
Sbjct: 240 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSI---DPDIV 296
Query: 369 TYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEM 428
TY+ +I L +DR++E ++ M+S GCL DV +Y +I G C ++++ K EM
Sbjct: 297 TYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM 356
Query: 429 GNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDP 488
+G + VTYN ++ ++A + + +M P + TYN+L+ + +
Sbjct: 357 SQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGEL 416
Query: 489 DGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSF 548
+ A +++M+KR +LD TY +I G+ K EEA SL + KG+K + +
Sbjct: 417 EKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTM 476
Query: 549 LIQLSDLGDLHAIHKLSDHMRK 570
+ L G LH + L M++
Sbjct: 477 MSGLCTKGLLHEVEALYTKMKQ 498
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 148/321 (46%), Gaps = 4/321 (1%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSP 310
++ + P I FN LL A+ K + L KKM + I + T+NI++ +C
Sbjct: 77 VKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQV 136
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
+ + +L +M++LG+ PD T + ++ +C+ +++AV L + M G P Y
Sbjct: 137 SLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY---KPDIVAY 193
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGN 430
+I +L + R+ + F + G P+V TY ++ G+C + +A + L +M
Sbjct: 194 NAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK 253
Query: 431 KGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDG 490
K P+++TY+ L N K EA +L+ M+ + P + TY+ LI+ D D
Sbjct: 254 KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDE 313
Query: 491 AFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLI 550
A + + M +GC D +Y +I G + E+ L E+ +G+ +++ +
Sbjct: 314 ANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQ 373
Query: 551 QLSDLGDLHAIHKLSDHMRKF 571
GD+ + M F
Sbjct: 374 GFFQAGDVDKAQEFFSQMDFF 394
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 133/297 (44%), Gaps = 10/297 (3%)
Query: 168 AFRFFTWAGNQENYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEV 227
AF FF ++ Y +++ L ++ R++ DM+ K K T V
Sbjct: 209 AFDFFKEI-ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI-----KKKITPNVIT 262
Query: 228 LMTILRKYTEKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM- 286
+L + + K ++ +R+ P+I ++ L++ LC ++ A ++ M
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322
Query: 287 RKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMIT 346
K + +YN L+ G+C+ + GMKL EM Q G + TYNT + + +AG +
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382
Query: 347 EAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYK 406
+A + F M G SP TY I++ L N +E+ + M D+ TY
Sbjct: 383 KAQEFFSQMDFFG---ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYT 439
Query: 407 DIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRM 463
+I G+C GK++EA+ + KG PDIVTY + LC E LY +M
Sbjct: 440 TVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 160/336 (47%), Gaps = 14/336 (4%)
Query: 259 EINAFNLLLDALCKCCLVEYAEGLYKKMRKIINT-NAETYNILVFGWCRVRSPTRGMKLL 317
++ + +++D+ CK L+E A + +MR++ T N TY L+ + + + + +L
Sbjct: 517 DVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF 576
Query: 318 EEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFE-------------FMRTKGSTISS 364
E M+ G P+ TY+ +D +CKAG + +A +FE + +
Sbjct: 577 ETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSER 636
Query: 365 PTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKF 424
P TY ++ ++ R+EE KL+ M GC P+ Y +I+G+C GK+DEA +
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696
Query: 425 LEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFE 484
EM G+P + TY+ + K+ + A K+ +M+E C P+V Y +I +
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 756
Query: 485 MDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKK 544
+ D A++ Q ME++GC + TY MI+G K E LLE + +KG+ Y
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816
Query: 545 FDSFLIQLSDLGDLHAIHKLSDHMRKFYNPAMARRY 580
+ + G L H L + M++ + P Y
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGY 852
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 113/482 (23%), Positives = 199/482 (41%), Gaps = 33/482 (6%)
Query: 106 DFGS-GMSNVVQLDSDVDKVCNTMMDNLHGFNNL-----EKALDQLAIPLSTPLVTGVLH 159
D+G+ + VV + + + D + G +++ +K L Q LS LV VL
Sbjct: 81 DYGNVNVHQVVPIITQSSIDARAIADAVSGVDDVFGRKSQKFLRQFREKLSESLVIEVL- 139
Query: 160 RLRYDEKIAFRFFTWAGNQENYSHEPCAYNDMMD-ILSSTKYKVKQFRIVCDMLDYMKRK 218
RL FF WAG Q Y H YN ++D I+ KV + + L ++
Sbjct: 140 RLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPE-----EFLQQIRDD 194
Query: 219 NKSTVPVEVLMTILRKYTE--KYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLV 276
+K V E L ++RK+ + +++ + K R + P + +N L+ A K +
Sbjct: 195 DKE-VFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFR--PSRSTYNCLIQAFLKADRL 251
Query: 277 EYAEGLYKKMRKIINTNAETYNILVFGW--CRVRSPTRGMKLLEEMIQLGHRPDNFTYNT 334
+ A ++++M + N + + + F + C+V + L+E PD Y
Sbjct: 252 DSASLIHREM-SLANLRMDGFTLRCFAYSLCKVGKWREALTLVETE---NFVPDTVFYTK 307
Query: 335 ALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMI 394
+ C+A + EA+D MR +T P TY+ ++ ++ C +++ M+
Sbjct: 308 LISGLCEASLFEEAMDFLNRMR---ATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMM 364
Query: 395 SSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKS- 453
GC P + ++ C G AYK L++M G+ P V YN + +C +K S
Sbjct: 365 MEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSL 424
Query: 454 -----EEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTD 508
+ A K Y M+ + + + + AF +EM +G DT
Sbjct: 425 NCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTS 484
Query: 509 TYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHM 568
TY ++ L N +K E A L EE+ G+ + + G + K + M
Sbjct: 485 TYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM 544
Query: 569 RK 570
R+
Sbjct: 545 RE 546
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 144/331 (43%), Gaps = 24/331 (7%)
Query: 260 INAFNLLLDALCKCCLVEYAEGLYKKMRKIINT----NAETYNILVFGWCRVRSPTRGMK 315
+N N+ C C +Y E + +R++I + TY+ ++ C
Sbjct: 446 LNKINVSSFTRCLCSAGKY-EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFL 504
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
L EEM + G D +TY +D++CKAG+I +A F MR G T P TY +I
Sbjct: 505 LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCT---PNVVTYTALIH 561
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEM-GNKGYP 434
+ ++ +L M+S GCLP++ TY +I+G C G++++A + E M G+K P
Sbjct: 562 AYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVP 621
Query: 435 ---------------PDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLI 479
P++VTY L C + + EEA KL M C P+ Y+ LI
Sbjct: 622 DVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALI 681
Query: 480 SMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
++ D A E EM + G TY +I+ F + + A +L +++
Sbjct: 682 DGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCA 741
Query: 540 LPYKKFDSFLIQLSDLGDLHAIHKLSDHMRK 570
+ + L +G +KL M +
Sbjct: 742 PNVVIYTEMIDGLCKVGKTDEAYKLMQMMEE 772
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 136/293 (46%), Gaps = 22/293 (7%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKM------------RKIINTNAE-----TYNIL 300
P I ++ L+D CK VE A ++++M K + N+E TY L
Sbjct: 586 PNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGAL 645
Query: 301 VFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGS 360
+ G+C+ KLL+ M G P+ Y+ +D CK G + EA ++ M G
Sbjct: 646 LDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG- 704
Query: 361 TISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDE 420
T TY+ +I + R + K++ M+ + C P+V Y ++I+G+C GK DE
Sbjct: 705 --FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDE 762
Query: 421 AYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLIS 480
AYK ++ M KG P++VTY + K E L+L RM P+ TY +LI
Sbjct: 763 AYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLID 822
Query: 481 MFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEV 533
+ D A +EM++ T Y +IEG FN + E+ LL+E+
Sbjct: 823 HCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEG-FN-KEFIESLGLLDEI 873
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 118/260 (45%), Gaps = 13/260 (5%)
Query: 297 YNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYC--KAGMITEAVDLFEF 354
+N LV +C + KLL++M++ GH P YN + + C K + + +DL E
Sbjct: 375 FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEK 434
Query: 355 ----MRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIE 410
M G ++ ++ L + E+ F ++ MI G +PD +TY ++
Sbjct: 435 AYSEMLAAGVVLNKINVSSFT---RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLN 491
Query: 411 GVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIP 470
+C K++ A+ EEM G D+ TY + C E+A K + M E+ C P
Sbjct: 492 YLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTP 551
Query: 471 SVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLL 530
+V TY LI + + A E ++ M GC + TY +I+G + E+AC +
Sbjct: 552 NVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIF 611
Query: 531 EEVINK----GIKLPYKKFD 546
E + + + +K++D
Sbjct: 612 ERMCGSKDVPDVDMYFKQYD 631
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 133/311 (42%), Gaps = 39/311 (12%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMRK-IINTNAETYNILVFGWCRVRSPTRGMK 315
+P ++ L+D LCK ++ A+ + +M + TY+ L+ + +V+ K
Sbjct: 671 EPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASK 730
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
+L +M++ P+ Y +D CK G EA L + M KG P TY MI
Sbjct: 731 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGC---QPNVVTYTAMID 787
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
++E C +L+ M S G P+ TY+ +I+ C G +D A+ LEEM +P
Sbjct: 788 GFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPT 847
Query: 436 DIVTYNCFL-----------------------------RVLCDNKKSEEALKLYGRMIEL 466
Y + R+L DN + L++ R++E
Sbjct: 848 HTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEE 907
Query: 467 RCIPSV------QTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNC 520
S TYN LI + + AF+ + EM K+G + ++C +I+GLF
Sbjct: 908 VATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRN 967
Query: 521 NKTEEACSLLE 531
+K EA LL+
Sbjct: 968 SKISEALLLLD 978
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 183/403 (45%), Gaps = 10/403 (2%)
Query: 168 AFRFFTWAGNQENYSHE-PCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVE 226
+ FF WA ++++Y H+ P YN+M+D+ KV+QF + ++D MK +N + +E
Sbjct: 133 SLAFFNWATSRDDYDHKSPHPYNEMIDLSG----KVRQFDLAWHLIDLMKSRNVE-ISIE 187
Query: 227 VLMTILRKYTEKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM 286
++R+Y L + P+ AF++++ L + A+ + +
Sbjct: 188 TFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSL 247
Query: 287 RKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMIT 346
+ + Y LV GWCR + K+ +EM G P+ +TY+ +D C+ G I+
Sbjct: 248 KDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQIS 307
Query: 347 EAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYK 406
A D+F M G +P A T+ ++ + R E+ ++ M GC PD TY
Sbjct: 308 RAHDVFADMLDSG---CAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYN 364
Query: 407 DIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIEL 466
+IE C ++ A K L M K + T+N R + + A ++Y +M+E
Sbjct: 365 FLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEA 424
Query: 467 RCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEA 526
+C P+ TYN+L+ MF D + +EM+ + + +TY +++ A
Sbjct: 425 KCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNA 484
Query: 527 CSLLEEVINKGIKLP-YKKFDSFLIQLSDLGDLHAIHKLSDHM 568
L +E++ + P ++ L QL G L +L + M
Sbjct: 485 YKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKM 527
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 181/384 (47%), Gaps = 19/384 (4%)
Query: 148 PLSTPLVTGVLHRLRYDEKIAFRFFTWAGNQE-NYSHEPCAYNDMMDILSSTKYKVKQFR 206
P + LV VL RL A +FF + N Y H+ +++ +DI + ++
Sbjct: 53 PWTPNLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAA----RLHLHP 108
Query: 207 IVCDMLDYMKRKNKSTVPVEVLMTILRKYTEKYLTHVQKFAKKKRIRVKTQP-----EIN 261
V ++ M+ P + E+Y + K K ++ + ++
Sbjct: 109 TVWSLIHRMRSLRIGPSPKTFAIV-----AERYAS-AGKPDKAVKLFLNMHEHGCFQDLA 162
Query: 262 AFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMI 321
+FN +LD LCK VE A L++ +R + + TYN+++ GWC ++ + +++L+EM+
Sbjct: 163 SFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMV 222
Query: 322 QLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQND 381
+ G P+ TYNT L + +AG I A + F M+ + I TY ++
Sbjct: 223 ERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEID---VVTYTTVVHGFGVAG 279
Query: 382 RMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYN 441
++ + MI G LP V TY +I+ +C ++ A EEM +GY P++ TYN
Sbjct: 280 EIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYN 339
Query: 442 CFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKR 501
+R L + +L RM C P+ QTYNM+I + E + + A +++M
Sbjct: 340 VLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSG 399
Query: 502 GCNLDTDTYCVMIEGLFNCNKTEE 525
C + DTY ++I G+F ++E+
Sbjct: 400 DCLPNLDTYNILISGMFVRKRSED 423
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 143/289 (49%), Gaps = 5/289 (1%)
Query: 259 EINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKLL 317
+ ++F+L +D + L L +MR + I + +T+ I+ + P + +KL
Sbjct: 90 DASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLF 149
Query: 318 EEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTL 377
M + G D ++NT LD CK+ + +A +LF +R + S + TY +++
Sbjct: 150 LNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTV----TYNVILNGW 205
Query: 378 AQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDI 437
R + +++ M+ G P++TTY +++G G+I A++F EM + D+
Sbjct: 206 CLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDV 265
Query: 438 VTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQE 497
VTY + + + A ++ MI +PSV TYN +I + + D+ + A ++E
Sbjct: 266 VTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEE 325
Query: 498 MEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFD 546
M +RG + TY V+I GLF+ + L++ + N+G + ++ ++
Sbjct: 326 MVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYN 374
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 122/248 (49%), Gaps = 5/248 (2%)
Query: 328 DNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECF 387
D +++ A+D + + L MR S P+ KT+AI+ A + ++
Sbjct: 90 DASSFDLAIDIAARLHLHPTVWSLIHRMR---SLRIGPSPKTFAIVAERYASAGKPDKAV 146
Query: 388 KLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVL 447
KL M GC D+ ++ I++ +C ++++AY+ + + + D VTYN L
Sbjct: 147 KLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGW 205
Query: 448 CDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDT 507
C K++ +AL++ M+E P++ TYN ++ FF A+E + EM+KR C +D
Sbjct: 206 CLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDV 265
Query: 508 DTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDL-HAIHKLSD 566
TY ++ G + + A ++ +E+I +G+ +++ + L ++ +A+ +
Sbjct: 266 VTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEE 325
Query: 567 HMRKFYNP 574
+R+ Y P
Sbjct: 326 MVRRGYEP 333
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/469 (25%), Positives = 207/469 (44%), Gaps = 54/469 (11%)
Query: 118 DSDVDKVCNTMMDNLHGFNNLEKALDQLAIPLSTPLVTGVLHRLRYDEKIAFRFFTWAGN 177
D D D + + ++L LEK D P+ P V L L+ D K+AF+FF W+
Sbjct: 78 DFDRDWIRKVVHNDLWDDPGLEKLFDLTLAPIWVPRV---LVELKEDPKLAFKFFKWSMT 134
Query: 178 QENYSHEPCAYNDMMDIL---------SSTKYKVKQFRIVCDMLDYMKRKNKSTVP---- 224
+ + H +Y + IL +S ++ + CD+ D + VP
Sbjct: 135 RNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGV 194
Query: 225 VEVLMTILRKYTEKYLTHVQKFAKKKRIRV------------------------------ 254
+ L ++L +Q F+K KR RV
Sbjct: 195 FDALFSVLIDLG-MLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM 253
Query: 255 ---KTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSP 310
+P + +N+++D +CK VE A GL+++M+ + + + TYN ++ G+ +V
Sbjct: 254 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRL 313
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
+ EEM + PD TYN ++ +CK G + ++ + M+ G P +Y
Sbjct: 314 DDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGL---KPNVVSY 370
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGN 430
+ ++ + M++ K M G +P+ TY +I+ C G + +A++ EM
Sbjct: 371 STLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQ 430
Query: 431 KGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDG 490
G ++VTY + LCD ++ +EA +L+G+M IP++ +YN LI F + + D
Sbjct: 431 VGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDR 490
Query: 491 AFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
A E E++ RG D Y I GL + K E A ++ E+ GIK
Sbjct: 491 ALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIK 539
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 130/289 (44%), Gaps = 5/289 (1%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSP 310
++V + + + L+D LC ++ AE L+ KM + N +YN L+ G+ + ++
Sbjct: 429 LQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNM 488
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
R ++LL E+ G +PD Y T + C I A + M+ G +S Y
Sbjct: 489 DRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLI---Y 545
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGN 430
++ ++ E L+ M V T+ +I+G+C + +A + + N
Sbjct: 546 TTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISN 605
Query: 431 K-GYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPD 489
G + + + LC + + E A L+ +M++ +P Y L+ F+ +
Sbjct: 606 DFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVL 665
Query: 490 GAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGI 538
A +M + G LD Y ++ GL +CN+ ++A S LEE+I +GI
Sbjct: 666 EALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGI 714
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 161/316 (50%), Gaps = 7/316 (2%)
Query: 263 FNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMKLLEEMI 321
+++++D LCK ++ A L+ +M K + TYN L+ G+C G KLL +MI
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 322 QLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQND 381
+ P+ T++ +D++ K G + EA L + M +G +P TY +I + +
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI---APNTITYNSLIDGFCKEN 382
Query: 382 RMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYN 441
R+EE +++ MIS GC PD+ T+ +I G C +ID+ + EM +G + VTYN
Sbjct: 383 RLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYN 442
Query: 442 CFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKR 501
++ C + K E A KL+ M+ R P + +Y +L+ + + + A E + ++EK
Sbjct: 443 TLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKS 502
Query: 502 GCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAI 561
LD Y ++I G+ N +K ++A L + KG+KL + ++ I +S+L ++
Sbjct: 503 KMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYN---IMISELCRKDSL 559
Query: 562 HKLSDHMRKFYNPAMA 577
K RK A
Sbjct: 560 SKADILFRKMTEEGHA 575
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 156/346 (45%), Gaps = 39/346 (11%)
Query: 250 KRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINT-NAETYNILVFGWCRVR 308
K +++ +P+ FN LL+ LC C V A L +M ++ + T N LV G C
Sbjct: 148 KIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNG 207
Query: 309 SPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAK 368
+ + L++ M++ G +P+ TY L+ CK+G A++L M + + A
Sbjct: 208 KVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLD---AV 264
Query: 369 TYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKID--------- 419
Y+I+I L ++ ++ F L M G D+ TY +I G C G+ D
Sbjct: 265 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDM 324
Query: 420 --------------------------EAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKS 453
EA + L+EM +G P+ +TYN + C +
Sbjct: 325 IKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRL 384
Query: 454 EEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVM 513
EEA+++ MI C P + T+N+LI+ + + + D E ++EM RG +T TY +
Sbjct: 385 EEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTL 444
Query: 514 IEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLH 559
++G K E A L +E++++ ++ + L L D G+L
Sbjct: 445 VQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELE 490
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 143/282 (50%), Gaps = 4/282 (1%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMK 315
+ +I +N L+ C + L + M ++ I+ N T+++L+ + + +
Sbjct: 295 KADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQ 354
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
LL+EM+Q G P+ TYN+ +D +CK + EA+ + + M +KG P T+ I+I
Sbjct: 355 LLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC---DPDIMTFNILIN 411
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
+ +R+++ +L M G + + TY +++G C GK++ A K +EM ++ P
Sbjct: 412 GYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRP 471
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
DIV+Y L LCDN + E+AL+++G++ + + + Y ++I D A++ +
Sbjct: 472 DIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLF 531
Query: 496 QEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKG 537
+ +G LD Y +MI L + +A L ++ +G
Sbjct: 532 CSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEG 573
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 131/299 (43%), Gaps = 33/299 (11%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSP 310
I+ K P + F++L+D+ K + A+ L K+M ++ I N TYN L+ G+C+
Sbjct: 325 IKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRL 384
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISS------ 364
+++++ MI G PD T+N ++ YCKA I + ++LF M +G ++
Sbjct: 385 EEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTL 444
Query: 365 --------------------------PTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGC 398
P +Y I++ L N +E+ ++ G + S
Sbjct: 445 VQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKM 504
Query: 399 LPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALK 458
D+ Y II G+C K+D+A+ + KG D YN + LC +A
Sbjct: 505 ELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADI 564
Query: 459 LYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGL 517
L+ +M E P TYN+LI DD A E +EM+ G D T ++I L
Sbjct: 565 LFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML 623
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 136/318 (42%), Gaps = 39/318 (12%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSP 310
I+ + P + FN L A+ K E L K+M K I + T +I++ +CR R
Sbjct: 80 IQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKL 139
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
+ + ++++LG+ PD +NT L+ C ++EA++L
Sbjct: 140 SYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELV------------------ 181
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGN 430
DRM E MG+ P + T ++ G+CL GK+ +A ++ M
Sbjct: 182 ----------DRMVE----MGHK------PTLITLNTLVNGLCLNGKVSDAVVLIDRMVE 221
Query: 431 KGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDG 490
G+ P+ VTY L V+C + ++ A++L +M E Y+++I + D
Sbjct: 222 TGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDN 281
Query: 491 AFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLI 550
AF + EME +G D TY +I G N + ++ LL ++I + I F +
Sbjct: 282 AFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLID 341
Query: 551 QLSDLGDLHAIHKLSDHM 568
G L +L M
Sbjct: 342 SFVKEGKLREADQLLKEM 359
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 119/263 (45%), Gaps = 4/263 (1%)
Query: 313 GMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAI 372
+ L +MIQ P +N K + L + M +KG + + T +I
Sbjct: 72 AVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGI---AHSIYTLSI 128
Query: 373 MIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKG 432
MI + ++ F MG ++ G PD + ++ G+CL ++ EA + ++ M G
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188
Query: 433 YPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAF 492
+ P ++T N + LC N K +A+ L RM+E P+ TY ++++ + A
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248
Query: 493 ETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQL 552
E ++ME+R LD Y ++I+GL + A +L E+ KG K +++ +
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGF 308
Query: 553 SDLGDLHAIHK-LSDHMRKFYNP 574
+ G K L D +++ +P
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKISP 331
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 103/260 (39%), Gaps = 52/260 (20%)
Query: 236 TEKYLTHVQKFAKKKRIRVKTQ-----------PEINAFNLLLDALCKCCLVEYAEGLYK 284
T Y + + F K+ R+ Q P+I FN+L++ CK ++ L++
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFR 427
Query: 285 KM--RKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKA 342
+M R +I N TYN LV G+C+ KL +EM+ RPD +Y LD C
Sbjct: 428 EMSLRGVI-ANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDN 486
Query: 343 GMITEAV-----------------------------------DLFEFMRTKGSTISSPTA 367
G + +A+ DLF + KG + A
Sbjct: 487 GELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLD---A 543
Query: 368 KTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEE 427
+ Y IMI L + D + + L M G PD TY +I A + +EE
Sbjct: 544 RAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEE 603
Query: 428 MGNKGYPPDIVTYNCFLRVL 447
M + G+P D+ T + +L
Sbjct: 604 MKSSGFPADVSTVKMVINML 623
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 98/240 (40%), Gaps = 3/240 (1%)
Query: 329 NFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFK 388
N +Y L + +AVDLF R + PT + + +A+ + E
Sbjct: 53 NLSYRDKLSSGLVGIKADDAVDLF---RDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLA 109
Query: 389 LMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLC 448
L M S G + T +I C C K+ A+ + ++ GY PD V +N L LC
Sbjct: 110 LCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLC 169
Query: 449 DNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTD 508
+ EAL+L RM+E+ P++ T N L++ A M + G +
Sbjct: 170 LECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEV 229
Query: 509 TYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHM 568
TY ++ + +T A LL ++ + IKL K+ + L G L L + M
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 289
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 89/199 (44%), Gaps = 16/199 (8%)
Query: 236 TEKYLTHVQKFAKKKRIRV-----------KTQPEINAFNLLLDALCKCCLVEYAEGLYK 284
T Y T VQ F + ++ V + +P+I ++ +LLD LC +E A ++
Sbjct: 438 TVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFG 497
Query: 285 KMRKI-INTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAG 343
K+ K + + Y I++ G C L + G + D YN + C+
Sbjct: 498 KIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKD 557
Query: 344 MITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVT 403
+++A LF M +G +P TY I+I +D +L+ M SSG DV+
Sbjct: 558 SLSKADILFRKMTEEG---HAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVS 614
Query: 404 TYKDIIEGVCLCGKIDEAY 422
T K +I + G++D+++
Sbjct: 615 TVKMVINMLS-SGELDKSF 632
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 189/420 (45%), Gaps = 17/420 (4%)
Query: 136 NNLEKALDQLAIPLSTPLVTGVLHRLRYDEKIAFRFFTWAGNQENYSHEPCAYNDMMDIL 195
++LE ALD+ I S LV + RL + F WA + ++ P ++ +++ L
Sbjct: 86 SSLESALDETGIEPSVELVHALFDRLSSSPMLLHSVFKWAEMKPGFTLSPSLFDSVVNSL 145
Query: 196 SSTKYKVKQFRIVCDMLDYMKRKNKST--VPVEVLMTILRKYTEKYLTHVQ----KFAKK 249
K ++F I ++ R ++ + V + + ++R+Y + +FA+
Sbjct: 146 C----KAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFARS 201
Query: 250 KRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTN----AETYNILVFGWC 305
K+ E+ +LLDALCK V A +++ +++N +NIL+ GW
Sbjct: 202 YEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWF 261
Query: 306 RVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSP 365
R R + KL EEM + +P TY T ++ YC+ + A+++ E M+ I+
Sbjct: 262 RSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEIN-- 319
Query: 366 TAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFL 425
+ +I L + R+ E +M P + TY +++ C G + A K L
Sbjct: 320 -FMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKIL 378
Query: 426 EEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEM 485
+ M +G P TYN F + + K+EE + LY ++IE P TY++++ M E
Sbjct: 379 KMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCED 438
Query: 486 DDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKF 545
A + +EM+ RG + D T ++I L EEA + + +GI Y F
Sbjct: 439 GKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITF 498
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 117/405 (28%), Positives = 191/405 (47%), Gaps = 16/405 (3%)
Query: 138 LEKALDQLAIPLSTPLVTGVLHRLRYDEK---IAFRFFTWAGNQENYSHEPCAYNDMMDI 194
L+++L I LS L+ VL R+R+ F+ +A + H + + M+ I
Sbjct: 58 LKESLSSSGIHLSKDLIDRVLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFSLDTMLYI 117
Query: 195 LSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTE--KYLTHVQKFAKKKRI 252
L + +F + ++L KRK++S + + +L + + V+ F K KR+
Sbjct: 118 LGRNR----KFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKRL 173
Query: 253 RVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTR 312
V + FN LL LC+ + A +Y ++ + +T+NIL+ GW +S
Sbjct: 174 -VPDFFDTACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGW---KSSEE 229
Query: 313 GMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAI 372
EEM G +PD TYN+ +D YCK I +A L + MR + T P TY
Sbjct: 230 AEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEET---PDVITYTT 286
Query: 373 MIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKG 432
+I L + ++ +++ M GC PDV Y I C+ ++ +A K ++EM KG
Sbjct: 287 VIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKG 346
Query: 433 YPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAF 492
P+ TYN F RVL + +LY RM+ C+P+ Q+ LI MF + D A
Sbjct: 347 LSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAM 406
Query: 493 ETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKG 537
W++M +G + V+++ L + K EEA L E++ KG
Sbjct: 407 RLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKG 451
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 78/159 (49%), Gaps = 3/159 (1%)
Query: 400 PDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKL 459
PD+ T+ ++ G +EA F EEM KG PD+VTYN + V C +++ E+A KL
Sbjct: 212 PDLQTFNILLSG---WKSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKL 268
Query: 460 YGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFN 519
+M E P V TY +I + PD A E +EM++ GC D Y I
Sbjct: 269 IDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCI 328
Query: 520 CNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDL 558
+ +A L++E++ KG+ ++ F LS DL
Sbjct: 329 ARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDL 367
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 117/429 (27%), Positives = 200/429 (46%), Gaps = 17/429 (3%)
Query: 147 IPLSTPLVTGVLHRLRYDEKIAFRFFTWAGNQENYSHEPCAYNDMMDILSSTKYKVKQFR 206
+ LS LV +LHR R D + A WA + + + H AY+ +DIL K K++
Sbjct: 83 VNLSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILG----KAKKWD 138
Query: 207 IVCDMLDYMKRKNKSTVPVEVLMTILRKYTE--KYLTHVQKFAKKKRIRVKTQPEINAFN 264
+ + ++ M+ V + + I+R++ ++ V F + ++ E + N
Sbjct: 139 RMKEFVERMR--GDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTE--SMN 194
Query: 265 LLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLG 324
LLLD LCK VE A + +++ I NA T+NI + GWC+ + ++EM G
Sbjct: 195 LLLDTLCKEKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHG 254
Query: 325 HRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRME 384
RP +Y T + YC+ E + ++E + + S P + TY ++ +L E
Sbjct: 255 FRPCVISYTTIIRCYCQQ---FEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFE 311
Query: 385 ECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYK-FLEEMGNKGYPPDIVTYNCF 443
E ++ M SGC PD Y +I + G+++EA + F EM G + TYN
Sbjct: 312 EALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSM 371
Query: 444 LRVLCDNKKSEEALKLYGRMIELR-CIPSVQTYNMLISMFFEMDDPDGAFETWQEM-EKR 501
+ + C + + ++A++L M C P V TY L+ F+ D + +EM K
Sbjct: 372 IAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKH 431
Query: 502 GCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAI 561
+LD TY +I+ L N E A L EE+I++ I P + L++ ++H
Sbjct: 432 HLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDIT-PRHRTCLLLLEEVKKKNMHES 490
Query: 562 HKLSDHMRK 570
+ +H+ K
Sbjct: 491 AERIEHIMK 499
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 117/429 (27%), Positives = 200/429 (46%), Gaps = 17/429 (3%)
Query: 147 IPLSTPLVTGVLHRLRYDEKIAFRFFTWAGNQENYSHEPCAYNDMMDILSSTKYKVKQFR 206
+ LS LV +LHR R D + A WA + + + H AY+ +DIL K K++
Sbjct: 83 VNLSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILG----KAKKWD 138
Query: 207 IVCDMLDYMKRKNKSTVPVEVLMTILRKYTE--KYLTHVQKFAKKKRIRVKTQPEINAFN 264
+ + ++ M+ V + + I+R++ ++ V F + ++ E + N
Sbjct: 139 RMKEFVERMR--GDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTE--SMN 194
Query: 265 LLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLG 324
LLLD LCK VE A + +++ I NA T+NI + GWC+ + ++EM G
Sbjct: 195 LLLDTLCKEKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHG 254
Query: 325 HRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRME 384
RP +Y T + YC+ E + ++E + + S P + TY ++ +L E
Sbjct: 255 FRPCVISYTTIIRCYCQQ---FEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFE 311
Query: 385 ECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYK-FLEEMGNKGYPPDIVTYNCF 443
E ++ M SGC PD Y +I + G+++EA + F EM G + TYN
Sbjct: 312 EALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSM 371
Query: 444 LRVLCDNKKSEEALKLYGRMIELR-CIPSVQTYNMLISMFFEMDDPDGAFETWQEM-EKR 501
+ + C + + ++A++L M C P V TY L+ F+ D + +EM K
Sbjct: 372 IAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKH 431
Query: 502 GCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAI 561
+LD TY +I+ L N E A L EE+I++ I P + L++ ++H
Sbjct: 432 HLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDIT-PRHRTCLLLLEEVKKKNMHES 490
Query: 562 HKLSDHMRK 570
+ +H+ K
Sbjct: 491 AERIEHIMK 499
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 114/456 (25%), Positives = 201/456 (44%), Gaps = 51/456 (11%)
Query: 126 NTMMDNLHGFNNLEKALD----QLAIPLSTPLVTGVLH--RLRYDEKIAFRFFTWAGNQE 179
+ +++ L G ++E LD + I LS V+ VL +R IA+ FF W+ Q+
Sbjct: 87 SQILNLLDGSASMESNLDGFCRKFLIKLSPNFVSFVLKSDEIREKPDIAWSFFCWSRKQK 146
Query: 180 NYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEKY 239
Y+H Y ++D+L+ K V + R V + +K + + V +++ + +
Sbjct: 147 KYTHNLECYVSLVDVLALAK-DVDRIRFVSSEI----KKFEFPMTVSAANALIKSFGKLG 201
Query: 240 LTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYN 298
+ + +K +P + +N L++ L V+ AE +++ M I + TYN
Sbjct: 202 MVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYN 261
Query: 299 ILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDT-------------------- 338
++ G+C+ + M+ L +M GH D TY T +
Sbjct: 262 TMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEK 321
Query: 339 ---------------YCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRM 383
CK G + E +FE M KGS P Y ++I A++ +
Sbjct: 322 GIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGS---KPNVAIYTVLIDGYAKSGSV 378
Query: 384 EECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCF 443
E+ +L+ MI G PDV TY ++ G+C G+++EA + G + + Y+
Sbjct: 379 EDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSL 438
Query: 444 LRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEM-EKRG 502
+ L + +EA +L+ M E C YN LI F + D A ++ M E+ G
Sbjct: 439 IDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEG 498
Query: 503 CNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGI 538
C+ TY +++ G+F ++ EEA L + +I+KGI
Sbjct: 499 CDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGI 534
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 99/210 (47%), Gaps = 4/210 (1%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMK 315
+P++ ++++++ LCK VE A + R + N+ Y+ L+ G + +
Sbjct: 394 KPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAER 453
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
L EEM + G D++ YN +D + K + EA+ LF+ M + T TY I++
Sbjct: 454 LFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGC--DQTVYTYTILLS 511
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
+ + R EE KL MI G P ++ + G+CL GK+ A K L+E+ G
Sbjct: 512 GMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVIL 571
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIE 465
D + + LC + +EA KL + E
Sbjct: 572 DAACED-MINTLCKAGRIKEACKLADGITE 600
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 123/314 (39%), Gaps = 41/314 (13%)
Query: 261 NAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKLLEE 319
+AF+L++ LCK + +++ M RK N Y +L+ G+ + S ++LL
Sbjct: 328 HAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHR 387
Query: 320 MIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQ 379
MI G +PD TY+ ++ CK G + EA+D F R G I+S Y+ +I L +
Sbjct: 388 MIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINS---MFYSSLIDGLGK 444
Query: 380 NDRMEECFKLMGYMISSGCLPD------------------------------------VT 403
R++E +L M GC D V
Sbjct: 445 AGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVY 504
Query: 404 TYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRM 463
TY ++ G+ + +EA K + M +KG P + LC + K A K+ +
Sbjct: 505 TYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDEL 564
Query: 464 IELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKT 523
+ I +M I+ + A + + +RG + VMI L K
Sbjct: 565 APMGVILDAACEDM-INTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKA 623
Query: 524 EEACSLLEEVINKG 537
+ A L+ I G
Sbjct: 624 DLAMKLMHSKIGIG 637
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 93/207 (44%), Gaps = 3/207 (1%)
Query: 333 NTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGY 392
N + ++ K GM+ E + ++ M+ G PT TY ++ L ++ ++
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGI---EPTLYTYNFLMNGLVSAMFVDSAERVFEV 247
Query: 393 MISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKK 452
M S PD+ TY +I+G C G+ +A + L +M +G+ D +TY ++ +
Sbjct: 248 MESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSD 307
Query: 453 SEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCV 512
+ LY M E ++++I + + + ++ M ++G + Y V
Sbjct: 308 FGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTV 367
Query: 513 MIEGLFNCNKTEEACSLLEEVINKGIK 539
+I+G E+A LL +I++G K
Sbjct: 368 LIDGYAKSGSVEDAIRLLHRMIDEGFK 394
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 1/177 (0%)
Query: 402 VTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYG 461
V+ +I+ G ++E +M G P + TYN + L + A +++
Sbjct: 187 VSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFE 246
Query: 462 RMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCN 521
M R P + TYN +I + + A E ++ME RG D TY MI+ + +
Sbjct: 247 VMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADS 306
Query: 522 KTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHM-RKFYNPAMA 577
+L +E+ KGI++P F + L G L+ + + ++M RK P +A
Sbjct: 307 DFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVA 363
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 202/448 (45%), Gaps = 60/448 (13%)
Query: 142 LDQLAIPLSTPLVTGVLHRLRYDEKIAFRFFTWAGNQENYSHEPCAYNDMMDILSSTKYK 201
L++L+ L + V VL +++ D ++ FF WA + SH + ++ L+ K
Sbjct: 72 LNKLSDHLDSFRVKNVLLKIQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLT----K 127
Query: 202 VKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTE------------KYLTHVQKFAKK 249
++F+ +L + +P +V +L Y E K H++KF
Sbjct: 128 NRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNA 187
Query: 250 KRIRVKTQ-----PEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFG 303
++ + P + + N + +L V+ A Y++MR+ I+ N T N+++ G
Sbjct: 188 TDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSG 247
Query: 304 WCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTIS 363
+CR +G++LL++M +LG R + +YNT + +C+ G+++ A+ L M G +
Sbjct: 248 YCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMM---GKSGL 304
Query: 364 SPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYK 423
P T+ +I + +++E K+ G M + P+ TY +I G G + A++
Sbjct: 305 QPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFR 364
Query: 424 FLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEA--------------------------- 456
F E+M G DI+TYN + LC K+ +A
Sbjct: 365 FYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQC 424
Query: 457 --------LKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTD 508
+LY MI C P+ QT+NML+S F +D DGA + +EM +R LD+
Sbjct: 425 VRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSR 484
Query: 509 TYCVMIEGLFNCNKTEEACSLLEEVINK 536
T + GL + K + LL+E+ K
Sbjct: 485 TVHQVCNGLKHQGKDQLVKKLLQEMEGK 512
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 202/448 (45%), Gaps = 60/448 (13%)
Query: 142 LDQLAIPLSTPLVTGVLHRLRYDEKIAFRFFTWAGNQENYSHEPCAYNDMMDILSSTKYK 201
L++L+ L + V VL +++ D ++ FF WA + SH + ++ L+ K
Sbjct: 72 LNKLSDHLDSFRVKNVLLKIQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLT----K 127
Query: 202 VKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTE------------KYLTHVQKFAKK 249
++F+ +L + +P +V +L Y E K H++KF
Sbjct: 128 NRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNA 187
Query: 250 KRIRVKTQ-----PEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFG 303
++ + P + + N + +L V+ A Y++MR+ I+ N T N+++ G
Sbjct: 188 TDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSG 247
Query: 304 WCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTIS 363
+CR +G++LL++M +LG R + +YNT + +C+ G+++ A+ L M G +
Sbjct: 248 YCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMM---GKSGL 304
Query: 364 SPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYK 423
P T+ +I + +++E K+ G M + P+ TY +I G G + A++
Sbjct: 305 QPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFR 364
Query: 424 FLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEA--------------------------- 456
F E+M G DI+TYN + LC K+ +A
Sbjct: 365 FYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQC 424
Query: 457 --------LKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTD 508
+LY MI C P+ QT+NML+S F +D DGA + +EM +R LD+
Sbjct: 425 VRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSR 484
Query: 509 TYCVMIEGLFNCNKTEEACSLLEEVINK 536
T + GL + K + LL+E+ K
Sbjct: 485 TVHQVCNGLKHQGKDQLVKKLLQEMEGK 512
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 203/450 (45%), Gaps = 18/450 (4%)
Query: 109 SGMSNVVQLDSDV---DKVCNTMMDNLHGFNNLEKALDQLAIPLSTPLVTGVLHRLRYDE 165
S N V +DS + DK+ + L G + ++K+L L I LS +V VL+R
Sbjct: 72 SSSKNQVAIDSFLSAEDKLRGVFLQKLKGKSAIQKSLSSLGIGLSIDIVADVLNRGNLSG 131
Query: 166 KIAFRFFTWAGNQENYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPV 225
+ FF WA + + + +Y+ ++ L + K F + D+L M + + +
Sbjct: 132 EAMVTFFDWAVREPGVTKDVGSYSVILRALG----RRKLFSFMMDVLKGMVCEGVNP-DL 186
Query: 226 EVLMTILRKYTEKYLTH--VQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLY 283
E L + + + ++ F + + VK E +FN LL LC+ V A+ ++
Sbjct: 187 ECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTE--SFNALLRCLCERSHVSAAKSVF 244
Query: 284 KKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAG 343
+ I ++ +YNI++ GW ++ K+L+EM++ G PD +Y+ ++ + G
Sbjct: 245 NAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTG 304
Query: 344 MITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVT 403
I ++V++F+ ++ KG+ P A Y MI +E + M+ C P++
Sbjct: 305 RINDSVEIFDNIKHKGNV---PDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLE 361
Query: 404 TYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRM 463
TY ++ G+ K+ +A + EEM ++G P FL+ LC A+ +Y +
Sbjct: 362 TYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKS 421
Query: 464 IELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKT 523
+ C S Y +L+ W EM++ G D + Y +++GL
Sbjct: 422 RKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHL 481
Query: 524 EEACSLLEEVINKGI---KLPYKKFDSFLI 550
E A ++EE + KG + Y + S L+
Sbjct: 482 ENAVLVMEEAMRKGFCPNRFVYSRLSSKLM 511
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 149/323 (46%), Gaps = 5/323 (1%)
Query: 259 EINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMKLL 317
++ +++++L AL + L + + K M + +N + E I + + RV R ++L
Sbjct: 150 DVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELF 209
Query: 318 EEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTL 377
EE G + ++N L C+ ++ A +F K I + +Y IMI
Sbjct: 210 EESESFGVKCSTESFNALLRCLCERSHVSAAKSVFN---AKKGNIPFDSC-SYNIMISGW 265
Query: 378 AQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDI 437
++ +EE K++ M+ SG PD +Y +IEG+ G+I+++ + + + +KG PD
Sbjct: 266 SKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDA 325
Query: 438 VTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQE 497
YN + + +E+++ Y RM++ C P+++TY+ L+S + A E ++E
Sbjct: 326 NVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEE 385
Query: 498 MEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGD 557
M RG T ++ L + A + ++ G ++ + L +LS G
Sbjct: 386 MLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGK 445
Query: 558 LHAIHKLSDHMRKFYNPAMARRY 580
+ + D M++ P+ Y
Sbjct: 446 CGMLLNVWDEMQESGYPSDVEVY 468
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 128/282 (45%), Gaps = 6/282 (2%)
Query: 290 INTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAV 349
+ + +Y++++ R + + M +L+ M+ G PD A+D++ + + A+
Sbjct: 147 VTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAI 206
Query: 350 DLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLP-DVTTYKDI 408
+LFE + G S+ +++ ++ L + + + + G +P D +Y +
Sbjct: 207 ELFEESESFGVKCST---ESFNALLRCLCERSHVSAAKSV--FNAKKGNIPFDSCSYNIM 261
Query: 409 IEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRC 468
I G G+++E K L+EM G+ PD ++Y+ + L + ++++++ +
Sbjct: 262 ISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGN 321
Query: 469 IPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACS 528
+P YN +I F D D + ++ M C + +TY ++ GL K +A
Sbjct: 322 VPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALE 381
Query: 529 LLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMRK 570
+ EE++++G+ SFL L G HA + RK
Sbjct: 382 IFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRK 423
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 87/183 (47%), Gaps = 3/183 (1%)
Query: 293 NAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLF 352
N ETY+ LV G + R + +++ EEM+ G P + L C G A+ ++
Sbjct: 359 NLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIY 418
Query: 353 EFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGV 412
+ R G IS Y +++ L++ + + M SG DV Y+ I++G+
Sbjct: 419 QKSRKAGCRISESA---YKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGL 475
Query: 413 CLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSV 472
C+ G ++ A +EE KG+ P+ Y+ L + K+E A KL+ ++ + R +
Sbjct: 476 CIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKIKKARATENA 535
Query: 473 QTY 475
+++
Sbjct: 536 RSF 538
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 152/312 (48%), Gaps = 5/312 (1%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLL 317
P++ +N+++ CK + A + +M ++ + TYN ++ C + M++L
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMS--VSPDVVTYNTILRSLCDSGKLKQAMEVL 227
Query: 318 EEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTL 377
+ M+Q PD TY ++ C+ + A+ L + MR +G T P TY +++ +
Sbjct: 228 DRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCT---PDVVTYNVLVNGI 284
Query: 378 AQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDI 437
+ R++E K + M SSGC P+V T+ I+ +C G+ +A K L +M KG+ P +
Sbjct: 285 CKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV 344
Query: 438 VTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQE 497
VT+N + LC A+ + +M + C P+ +YN L+ F + D A E +
Sbjct: 345 VTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLER 404
Query: 498 MEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGD 557
M RGC D TY M+ L K E+A +L ++ +KG +++ + L+ G
Sbjct: 405 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464
Query: 558 LHAIHKLSDHMR 569
KL D MR
Sbjct: 465 TGKAIKLLDEMR 476
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 144/283 (50%), Gaps = 4/283 (1%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMK 315
QP + N++L ++C AE L M RK + + T+NIL+ CR R +
Sbjct: 306 QPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAID 365
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
+LE+M Q G +P++ +YN L +CK + A++ E M ++G P TY M+
Sbjct: 366 ILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY---PDIVTYNTMLT 422
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
L ++ ++E+ +++ + S GC P + TY +I+G+ GK +A K L+EM K P
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKP 482
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
D +TY+ + L K +EA+K + + P+ T+N ++ + D A +
Sbjct: 483 DTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFL 542
Query: 496 QEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGI 538
M RGC + +Y ++IEGL +EA LL E+ NKG+
Sbjct: 543 VFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 148/307 (48%), Gaps = 4/307 (1%)
Query: 253 RVKTQPEINAFNLLLDALCKCCLVEYA-EGLYKKMRKIINTNAETYNILVFGWCRVRSPT 311
R+ P++ +N +L +LC ++ A E L + +++ + TY IL+ CR
Sbjct: 197 RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVG 256
Query: 312 RGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYA 371
MKLL+EM G PD TYN ++ CK G + EA+ M + G P T+
Sbjct: 257 HAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGC---QPNVITHN 313
Query: 372 IMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNK 431
I++ ++ R + KL+ M+ G P V T+ +I +C G + A LE+M
Sbjct: 314 IILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQH 373
Query: 432 GYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGA 491
G P+ ++YN L C KK + A++ RM+ C P + TYN +++ + + A
Sbjct: 374 GCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDA 433
Query: 492 FETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQ 551
E ++ +GC+ TY +I+GL KT +A LL+E+ K +K + S +
Sbjct: 434 VEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGG 493
Query: 552 LSDLGDL 558
LS G +
Sbjct: 494 LSREGKV 500
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 143/296 (48%), Gaps = 4/296 (1%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMKL 316
P++ + +L++A C+ V +A L +MR + + TYN+LV G C+ +K
Sbjct: 237 PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKF 296
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
L +M G +P+ T+N L + C G +A L M KG SP+ T+ I+I
Sbjct: 297 LNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF---SPSVVTFNILINF 353
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
L + + ++ M GC P+ +Y ++ G C K+D A ++LE M ++G PD
Sbjct: 354 LCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPD 413
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQ 496
IVTYN L LC + K E+A+++ ++ C P + TYN +I + A +
Sbjct: 414 IVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLD 473
Query: 497 EMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQL 552
EM + DT TY ++ GL K +EA E GI+ F+S ++ L
Sbjct: 474 EMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGL 529
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 139/307 (45%), Gaps = 30/307 (9%)
Query: 300 LVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKG 359
L+ G+CR+ + K+LE + G PD TYN + YCKAG I A+ + + M
Sbjct: 143 LIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSP 202
Query: 360 STIS-----------------------------SPTAKTYAIMIVTLAQNDRMEECFKLM 390
++ P TY I+I ++ + KL+
Sbjct: 203 DVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLL 262
Query: 391 GYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDN 450
M GC PDV TY ++ G+C G++DEA KFL +M + G P+++T+N LR +C
Sbjct: 263 DEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCST 322
Query: 451 KKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTY 510
+ +A KL M+ PSV T+N+LI+ A + ++M + GC ++ +Y
Sbjct: 323 GRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSY 382
Query: 511 CVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLH-AIHKLSDHMR 569
++ G K + A LE ++++G +++ L L G + A+ L+
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442
Query: 570 KFYNPAM 576
K +P +
Sbjct: 443 KGCSPVL 449
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 180/380 (47%), Gaps = 28/380 (7%)
Query: 182 SHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYT--EKY 239
S + YN ++ L + K+KQ ++LD M +++ P + TIL + T +
Sbjct: 201 SPDVVTYNTILRSLCDSG-KLKQ---AMEVLDRMLQRD--CYPDVITYTILIEATCRDSG 254
Query: 240 LTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINT------- 292
+ H K + R R T P++ +N+L++ +CK EG + K +N
Sbjct: 255 VGHAMKLLDEMRDRGCT-PDVVTYNVLVNGICK-------EGRLDEAIKFLNDMPSSGCQ 306
Query: 293 -NAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDL 351
N T+NI++ C KLL +M++ G P T+N ++ C+ G++ A+D+
Sbjct: 307 PNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDI 366
Query: 352 FEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEG 411
E M G P + +Y ++ + +M+ + + M+S GC PD+ TY ++
Sbjct: 367 LEKMPQHGC---QPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTA 423
Query: 412 VCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPS 471
+C GK+++A + L ++ +KG P ++TYN + L K+ +A+KL M P
Sbjct: 424 LCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPD 483
Query: 472 VQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLE 531
TY+ L+ D A + + E E+ G + T+ ++ GL +T+ A L
Sbjct: 484 TITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLV 543
Query: 532 EVINKGIKLPYKKFDSFLIQ 551
+IN+G K P + + LI+
Sbjct: 544 FMINRGCK-PNETSYTILIE 562
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 102/233 (43%), Gaps = 33/233 (14%)
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
+ + +EE FK + M+ G +PD+ +I G C GK +A K LE + G PD
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171
Query: 437 --------------------------------IVTYNCFLRVLCDNKKSEEALKLYGRMI 464
+VTYN LR LCD+ K ++A+++ RM+
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRML 231
Query: 465 ELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTE 524
+ C P V TY +LI A + EM RGC D TY V++ G+ + +
Sbjct: 232 QRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLD 291
Query: 525 EACSLLEEVINKGIKLPYKKFDSFLIQLSDLGD-LHAIHKLSDHMRKFYNPAM 576
EA L ++ + G + + L + G + A L+D +RK ++P++
Sbjct: 292 EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV 344
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 142/291 (48%), Gaps = 6/291 (2%)
Query: 249 KKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYK--KMRKIINTNAETYNILVFGWCR 306
K I P++ N +D + K E +++ K R+ + +A +Y+IL+ G +
Sbjct: 506 KDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFV-PDARSYSILIHGLIK 564
Query: 307 VRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPT 366
+L M + G D YN +D +CK G + +A L E M+TKG PT
Sbjct: 565 AGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGF---EPT 621
Query: 367 AKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLE 426
TY +I LA+ DR++E + L S +V Y +I+G G+IDEAY LE
Sbjct: 622 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILE 681
Query: 427 EMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMD 486
E+ KG P++ T+N L L ++ EAL + M EL+C P+ TY +LI+ ++
Sbjct: 682 ELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVR 741
Query: 487 DPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKG 537
+ AF WQEM+K+G T +Y MI GL EA +L + G
Sbjct: 742 KFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANG 792
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 113/452 (25%), Positives = 197/452 (43%), Gaps = 18/452 (3%)
Query: 121 VDKVCNTMMDNLHGFNNLEKALDQLAIPLSTPLVTGVLHRLRYDEKIAFRFFTWAGNQEN 180
V+ +CN + G + E L L+ V GVL RL+ D A +F W +
Sbjct: 36 VNDICNVLETGPWG-PSAENTLSALSFKPQPEFVIGVLRRLK-DVNRAIEYFRWYERRTE 93
Query: 181 YSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKN---KSTVPVEVLMTILRKYTE 237
H P +YN ++ +++ + + F + +L M +E+++ ++
Sbjct: 94 LPHCPESYNSLLLVMA----RCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKL 149
Query: 238 KYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAET 296
+ V + +K + R P +A+ L+ A + L+++M+++
Sbjct: 150 REGYDVVQMMRKFKFR----PAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHL 205
Query: 297 YNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMR 356
+ L+ G+ + + LL+EM D YN +D++ K G + A F +
Sbjct: 206 FTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIE 265
Query: 357 TKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCG 416
G P TY MI L + +R++E ++ ++ + +P Y +I G G
Sbjct: 266 ANG---LKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAG 322
Query: 417 KIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYN 476
K DEAY LE KG P ++ YNC L L K +EALK++ M + P++ TYN
Sbjct: 323 KFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYN 381
Query: 477 MLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINK 536
+LI M D AFE M+K G + T +M++ L K +EAC++ EE+ K
Sbjct: 382 ILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYK 441
Query: 537 GIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHM 568
F S + L +G + +K+ + M
Sbjct: 442 VCTPDEITFCSLIDGLGKVGRVDDAYKVYEKM 473
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 157/321 (48%), Gaps = 4/321 (1%)
Query: 250 KRIRVKTQ-PEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVR 308
+R R K P + A+N +L L K V+ A ++++M+K N TYNIL+ CR
Sbjct: 332 ERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAG 391
Query: 309 SPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAK 368
+L + M + G P+ T N +D CK+ + EA +FE M K + +P
Sbjct: 392 KLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYK---VCTPDEI 448
Query: 369 TYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEM 428
T+ +I L + R+++ +K+ M+ S C + Y +I+ G+ ++ +K ++M
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 508
Query: 429 GNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDP 488
N+ PD+ N ++ + + E+ ++ + R +P ++Y++LI +
Sbjct: 509 INQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFA 568
Query: 489 DGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSF 548
+ +E + M+++GC LDT Y ++I+G C K +A LLEE+ KG + + S
Sbjct: 569 NETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSV 628
Query: 549 LIQLSDLGDLHAIHKLSDHMR 569
+ L+ + L + L + +
Sbjct: 629 IDGLAKIDRLDEAYMLFEEAK 649
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 177/398 (44%), Gaps = 17/398 (4%)
Query: 185 PC--AYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNK--STVPVEVLMTILRKYTEKYL 240
PC AYN M+ S +F +L+ + K S + ++T LRK K
Sbjct: 306 PCTYAYNTMIMGYGSAG----KFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMG-KVD 360
Query: 241 THVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNI 299
++ F + K+ P ++ +N+L+D LC+ ++ A L M+K + N T NI
Sbjct: 361 EALKVFEEMKK---DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNI 417
Query: 300 LVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKG 359
+V C+ + + EEM PD T+ + +D K G + +A ++E M
Sbjct: 418 MVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSD 477
Query: 360 STISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKID 419
+S Y +I + R E+ K+ MI+ C PD+ ++ + G+ +
Sbjct: 478 CRTNSIV---YTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPE 534
Query: 420 EAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLI 479
+ EE+ + + PD +Y+ + L + E +L+ M E C+ + YN++I
Sbjct: 535 KGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVI 594
Query: 480 SMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
F + + A++ +EM+ +G TY +I+GL ++ +EA L EE +K I+
Sbjct: 595 DGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIE 654
Query: 540 LPYKKFDSFLIQLSDLGDL-HAIHKLSDHMRKFYNPAM 576
L + S + +G + A L + M+K P +
Sbjct: 655 LNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNL 692
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 116/269 (43%), Gaps = 4/269 (1%)
Query: 259 EINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMKLL 317
+ A+N+++D CKC V A L ++M+ K TY ++ G ++ L
Sbjct: 586 DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLF 645
Query: 318 EEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTL 377
EE + Y++ +D + K G I EA + E + KG T P T+ ++ L
Sbjct: 646 EEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLT---PNLYTWNSLLDAL 702
Query: 378 AQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDI 437
+ + + E M C P+ TY +I G+C K ++A+ F +EM +G P
Sbjct: 703 VKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPST 762
Query: 438 VTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQE 497
++Y + L EA L+ R +P YN +I + AF ++E
Sbjct: 763 ISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEE 822
Query: 498 MEKRGCNLDTDTYCVMIEGLFNCNKTEEA 526
+RG + T V+++ L + E+A
Sbjct: 823 TRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 112/271 (41%), Gaps = 4/271 (1%)
Query: 300 LVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKG 359
+V G + G +++ M + RP Y T + + + LF+ M+ G
Sbjct: 139 MVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELG 198
Query: 360 STISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKID 419
PT + +I A+ R++ L+ M SS D+ Y I+ GK+D
Sbjct: 199 Y---EPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVD 255
Query: 420 EAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLI 479
A+KF E+ G PD VTY + VLC + +EA++++ + + R +P YN +I
Sbjct: 256 MAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMI 315
Query: 480 SMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
+ D A+ + +G Y ++ L K +EA + EE + K
Sbjct: 316 MGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEE-MKKDAA 374
Query: 540 LPYKKFDSFLIQLSDLGDLHAIHKLSDHMRK 570
++ + L G L +L D M+K
Sbjct: 375 PNLSTYNILIDMLCRAGKLDTAFELRDSMQK 405
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 184/392 (46%), Gaps = 23/392 (5%)
Query: 123 KVCNTMMDNLHGFNNLEKALDQLAIPLSTPLV----TGVLHRLRYDEK-----IAFRFFT 173
+V +T+ + GFN + ALD+L + +S LV G+L L +D K +A++FF
Sbjct: 82 RVLDTLQQDCPGFNT-KSALDELNVSISGLLVREVLVGILRTLSFDNKTRCAKLAYKFFV 140
Query: 174 WAGNQENYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILR 233
W G QEN+ H Y+ +M I + + +++ +C ++D M + T + I
Sbjct: 141 WCGGQENFRHTANCYHLLMKIFA----ECGEYKAMCRLIDEMIKDGYPTTACTFNLLIC- 195
Query: 234 KYTEKYLTH--VQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKII 290
E L V++F K K + P +++N +L +L + + +Y++M
Sbjct: 196 TCGEAGLARDVVEQFIKSKTFNYR--PYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGF 253
Query: 291 NTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVD 350
+ TYNI++F R+ R +LL+EM++ G PD +TYN L A++
Sbjct: 254 TPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALN 313
Query: 351 LFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIE 410
L MR G P + +I L++ ++E C M + GC PDV Y +I
Sbjct: 314 LLNHMREVG---VEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMIT 370
Query: 411 GVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIP 470
G G++++A + +EM KG P++ TYN +R C K +EA L M C P
Sbjct: 371 GYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNP 430
Query: 471 SVQTYNMLISMFFEMDDPDGAFETWQEMEKRG 502
+ Y+ L++ A E ++M ++G
Sbjct: 431 NFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 153/361 (42%), Gaps = 34/361 (9%)
Query: 226 EVLMTILRKYTEKYLTHVQKFAKKKRIRVKTQPEI----NAFNLLLDALCKCCLVEYAEG 281
EVL+ ILR + T K A K + Q N ++LL+ +C G
Sbjct: 114 EVLVGILRTLSFDNKTRCAKLAYKFFVWCGGQENFRHTANCYHLLMKIFAEC-------G 166
Query: 282 LYKKMRKIIN--------TNAETYNILVFGWCRVRSPTRGMKLLEEMIQ---LGHRPDNF 330
YK M ++I+ T A T+N+L+ C ++E+ I+ +RP
Sbjct: 167 EYKAMCRLIDEMIKDGYPTTACTFNLLI---CTCGEAGLARDVVEQFIKSKTFNYRPYKH 223
Query: 331 TYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT---LAQNDRMEECF 387
+YN L + ++E M G T P TY I++ L + DR+ +
Sbjct: 224 SYNAILHSLLGVKQYKLIDWVYEQMLEDGFT---PDVLTYNIVMFANFRLGKTDRL---Y 277
Query: 388 KLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVL 447
+L+ M+ G PD+ TY ++ + K A L M G P ++ + + L
Sbjct: 278 RLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGL 337
Query: 448 CDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDT 507
K E +++ C P V Y ++I+ + + + A E ++EM ++G +
Sbjct: 338 SRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNV 397
Query: 508 DTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDH 567
TY MI G K +EAC+LL+E+ ++G + + + + L + G + H++
Sbjct: 398 FTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKD 457
Query: 568 M 568
M
Sbjct: 458 M 458
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 81/183 (44%), Gaps = 4/183 (2%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKL 316
P++ +N+LL L A L MR++ + + L+ G R
Sbjct: 290 PDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYF 349
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
++E +++G PD Y + Y G + +A ++F+ M KG P TY MI
Sbjct: 350 MDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQL---PNVFTYNSMIRG 406
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
+ +E L+ M S GC P+ Y ++ + GK+ EA++ +++M KG+
Sbjct: 407 FCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVH 466
Query: 437 IVT 439
+++
Sbjct: 467 LIS 469
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 87/208 (41%), Gaps = 6/208 (2%)
Query: 366 TAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFL 425
TA Y +++ A+ + +L+ MI G T+ +I C CG+ A +
Sbjct: 151 TANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLI---CTCGEAGLARDVV 207
Query: 426 EEMGNK---GYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMF 482
E+ Y P +YN L L K+ + +Y +M+E P V TYN+++
Sbjct: 208 EQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFAN 267
Query: 483 FEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPY 542
F + D + EM K G + D TY +++ L NK A +LL + G++
Sbjct: 268 FRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGV 327
Query: 543 KKFDSFLIQLSDLGDLHAIHKLSDHMRK 570
F + + LS G L A D K
Sbjct: 328 IHFTTLIDGLSRAGKLEACKYFMDETVK 355
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 162/360 (45%), Gaps = 55/360 (15%)
Query: 223 VPVEV-LMTILRKYTE----KYLTHVQKFAKKKRIRVKTQ-----------PEINAFNLL 266
+P V +M IL K+ + Y + F K RI T+ P+ +N++
Sbjct: 140 IPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIM 199
Query: 267 LDALCKCCLVEYAEGLYKKMRKIINTNAE----TYNILVFGWCRVRSPTRGMKLLEEMIQ 322
+ +LC ++ A K + ++++ N + TY IL+ +KL++EM+
Sbjct: 200 IGSLCSRGKLDLA---LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLS 256
Query: 323 LGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKG----------------------- 359
G +PD FTYNT + CK GM+ A ++ + KG
Sbjct: 257 RGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEE 316
Query: 360 ---------STISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIE 410
S P TY+I+I TL ++ ++EE L+ M G PD +Y +I
Sbjct: 317 GEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIA 376
Query: 411 GVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIP 470
C G++D A +FLE M + G PDIV YN L LC N K+++AL+++G++ E+ C P
Sbjct: 377 AFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP 436
Query: 471 SVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLL 530
+ +YN + S + D A EM G + D TY MI L +EA LL
Sbjct: 437 NSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELL 496
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 145/307 (47%), Gaps = 6/307 (1%)
Query: 230 TILRKYTEKYLTHVQKFAKKKRIRVKT-QPEINAFNLLLDALCKCCLVEYAEGLYKKM-R 287
TI+R ++ + + F + + +K +P++ ++N+LL AL E E L KM
Sbjct: 268 TIIRGMCKEGMVD-RAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 326
Query: 288 KIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITE 347
+ + N TY+IL+ CR M LL+ M + G PD ++Y+ + +C+ G +
Sbjct: 327 EKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDV 386
Query: 348 AVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKD 407
A++ E M + G P Y ++ TL +N + ++ ++ G + GC P+ ++Y
Sbjct: 387 AIEFLETMISDGCL---PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNT 443
Query: 408 IIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELR 467
+ + G A + EM + G PD +TYN + LC +EA +L M
Sbjct: 444 MFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCE 503
Query: 468 CIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEAC 527
PSV TYN+++ F + + A + M GC + TY V+IEG+ EA
Sbjct: 504 FHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAM 563
Query: 528 SLLEEVI 534
L +++
Sbjct: 564 ELANDLV 570
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 118/242 (48%), Gaps = 3/242 (1%)
Query: 296 TYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFM 355
YN L+ G+C++ ++L+ M PD TYN + + C G + A+ + +
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 356 RTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLC 415
+ PT TY I+I ++E KLM M+S G PD+ TY II G+C
Sbjct: 220 LSDNC---QPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE 276
Query: 416 GKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTY 475
G +D A++ + + KG PD+++YN LR L + K EE KL +M +C P+V TY
Sbjct: 277 GMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY 336
Query: 476 NMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVIN 535
++LI+ + A + M+++G D +Y +I + + A LE +I+
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396
Query: 536 KG 537
G
Sbjct: 397 DG 398
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 165/364 (45%), Gaps = 13/364 (3%)
Query: 179 ENYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEK 238
+++S + YN M+ L S +++ +L + T + + T+L ++
Sbjct: 187 KDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDE 246
Query: 239 YLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETY 297
L + + + +P++ +N ++ +CK +V+ A + + + K + +Y
Sbjct: 247 ALKLMDEMLSRG-----LKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISY 301
Query: 298 NILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRT 357
NIL+ G KL+ +M P+ TY+ + T C+ G I EA++L + M+
Sbjct: 302 NILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKE 361
Query: 358 KGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGK 417
KG T P A +Y +I + R++ + + MIS GCLPD+ Y ++ +C GK
Sbjct: 362 KGLT---PDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGK 418
Query: 418 IDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNM 477
D+A + ++G G P+ +YN L + AL + M+ P TYN
Sbjct: 419 ADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNS 478
Query: 478 LISMFFEMDDPDGAFETWQEMEKRGCNLDTD--TYCVMIEGLFNCNKTEEACSLLEEVIN 535
+IS D AFE +M R C TY +++ G ++ E+A ++LE ++
Sbjct: 479 MISCLCREGMVDEAFELLVDM--RSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVG 536
Query: 536 KGIK 539
G +
Sbjct: 537 NGCR 540
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 130/289 (44%), Gaps = 39/289 (13%)
Query: 305 CRVRSPTRGMKLLEEMIQLGH----------------------------------RPDNF 330
CR + + LLE M++ G+ +PD F
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVF 159
Query: 331 TYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLM 390
YN ++ +CK I +A + + MR+K SP TY IMI +L +++ K++
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKD---FSPDTVTYNIMIGSLCSRGKLDLALKVL 216
Query: 391 GYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDN 450
++S C P V TY +IE L G +DEA K ++EM ++G PD+ TYN +R +C
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE 276
Query: 451 KKSEEALKLYGRMIELR-CIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDT 509
+ A ++ R +EL+ C P V +YN+L+ + + +M C+ + T
Sbjct: 277 GMVDRAFEMV-RNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 510 YCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDL 558
Y ++I L K EEA +LL+ + KG+ +D + G L
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRL 384
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 106/248 (42%), Gaps = 33/248 (13%)
Query: 255 KTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRG 313
K P + +++L+ LC+ +E A L K M+ K + +A +Y+ L+ +CR
Sbjct: 328 KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVA 387
Query: 314 MKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISS--------- 364
++ LE MI G PD YNT L T CK G +A+++F + G + +S
Sbjct: 388 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSA 447
Query: 365 -----------------------PTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPD 401
P TY MI L + ++E F+L+ M S P
Sbjct: 448 LWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPS 507
Query: 402 VTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYG 461
V TY ++ G C +I++A LE M G P+ TY + + EA++L
Sbjct: 508 VVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELAN 567
Query: 462 RMIELRCI 469
++ + I
Sbjct: 568 DLVRIDAI 575
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 129/483 (26%), Positives = 202/483 (41%), Gaps = 71/483 (14%)
Query: 139 EKALDQLAIPLSTPLVTGVLHRLRYDEKIAFRFFTWAGNQENYSHEPCAYNDMMDILSST 198
E + L L V VL R + DE++A +FF WA Q Y H+P Y M+++LS T
Sbjct: 162 EGQMRNLLRSLKPSQVCAVL-RSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKT 220
Query: 199 KYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTE--------KYLTHVQKFAKKK 250
K R+ L MKR+ P E ++ Y+ K LT +Q
Sbjct: 221 KLCQGSRRV----LVLMKRRGIYRTP-EAFSRVMVSYSRAGQLRDALKVLTLMQ------ 269
Query: 251 RIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRS 309
R +P + N +D + +E A ++M+ + I N TYN ++ G+C +
Sbjct: 270 --RAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHR 327
Query: 310 PTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKT 369
++LLE+M G PD +Y T + CK I E DL + M + + P T
Sbjct: 328 VEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLV--PDQVT 385
Query: 370 YAIMIVTLAQND-----------------------------------RMEECFKLMGYMI 394
Y +I L ++D RM E L+ M+
Sbjct: 386 YNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEML 445
Query: 395 SSG-CLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKS 453
S G C PDV TY ++ G C G++D+A K L+ M G+ P+ V+Y L +C KS
Sbjct: 446 SKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKS 505
Query: 454 EEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVM 513
EA ++ E P+ TY++++ A + +EM +G ++
Sbjct: 506 LEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLL 565
Query: 514 IEGLFNCNKTEEACSLLEEVINKGIKLPYKKF----------DSFLIQLSDLGDLHAIHK 563
++ L +T EA +EE +NKG + F D LS L D++ I+K
Sbjct: 566 LQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINK 625
Query: 564 LSD 566
+D
Sbjct: 626 HAD 628
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 106/433 (24%), Positives = 187/433 (43%), Gaps = 38/433 (8%)
Query: 124 VCNTMMDNLHGFNNLEKAL---DQLAIPLSTP-------LVTGVLHRLRYDEKIAFRFFT 173
+CNT +D N LEKAL +++ + P ++ G R +E I
Sbjct: 279 ICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIEL---- 334
Query: 174 WAGNQENYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKR--KNKSTVPVEVLMTI 231
E+ + C D + + Y K+ RIV ++ D MK+ K VP +V
Sbjct: 335 ----LEDMHSKGC-LPDKVSYYTIMGYLCKEKRIV-EVRDLMKKMAKEHGLVPDQVTYNT 388
Query: 232 LRKYTEKYLTHVQ------KFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKK 285
L K+ H K A++K R+ ++ ++ ALCK + A+ L +
Sbjct: 389 LIHMLTKH-DHADEALWFLKDAQEKGFRIDKL----GYSAIVHALCKEGRMSEAKDLINE 443
Query: 286 M--RKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAG 343
M + + TY +V G+CR+ + KLL+ M GH+P+ +Y L+ C+ G
Sbjct: 444 MLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTG 503
Query: 344 MITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVT 403
EA E M SP + TY++++ L + ++ E ++ M+ G P
Sbjct: 504 KSLEA---REMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPV 560
Query: 404 TYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRM 463
+++ +C G+ EA KF+EE NKG ++V + + C N + + AL + M
Sbjct: 561 EINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDM 620
Query: 464 IELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKT 523
+ V TY L+ + A E ++M +G + TY +I K
Sbjct: 621 YLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKV 680
Query: 524 EEACSLLEEVINK 536
++ ++LE++I++
Sbjct: 681 DDLVAILEKMISR 693
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 143/330 (43%), Gaps = 8/330 (2%)
Query: 237 EKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAE 295
EK + V+ KK P+ +N L+ L K + A K + K +
Sbjct: 360 EKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKL 419
Query: 296 TYNILVFGWCRVRSPTRGMKLLEEMIQLGH-RPDNFTYNTALDTYCKAGMITEAVDLFEF 354
Y+ +V C+ + L+ EM+ GH PD TY ++ +C+ G + +A L +
Sbjct: 420 GYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQV 479
Query: 355 MRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCL 414
M T G P +Y ++ + + + E ++M P+ TY I+ G+
Sbjct: 480 MHTHGH---KPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRR 536
Query: 415 CGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQT 474
GK+ EA + EM KG+ P V N L+ LC + ++ EA K + C +V
Sbjct: 537 EGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVN 596
Query: 475 YNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVI 534
+ +I F + D+ D A +M + D TY +++ L + EA L+++++
Sbjct: 597 FTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKML 656
Query: 535 NKGIK---LPYKKFDSFLIQLSDLGDLHAI 561
+KGI + Y+ Q+ + DL AI
Sbjct: 657 HKGIDPTPVTYRTVIHRYCQMGKVDDLVAI 686
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 121/314 (38%), Gaps = 35/314 (11%)
Query: 257 QPEINAFNLLLDALCKCCL-VEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMK 315
+P ++ LL+ +C+ +E E + + N+ TY++++ G R +
Sbjct: 486 KPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACD 545
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTIS------------ 363
++ EM+ G P N L + C+ G EA E KG I+
Sbjct: 546 VVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFC 605
Query: 364 --------------------SPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVT 403
TY ++ TL + R+ E +LM M+ G P
Sbjct: 606 QNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPV 665
Query: 404 TYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRM 463
TY+ +I C GK+D+ LE+M ++ I YN + LC K EEA L G++
Sbjct: 666 TYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTI--YNQVIEKLCVLGKLEEADTLLGKV 723
Query: 464 IELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKT 523
+ +T L+ + + P A++ M R D + + L K
Sbjct: 724 LRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKV 783
Query: 524 EEACSLLEEVINKG 537
+EA L+ ++ +G
Sbjct: 784 DEADKLMLRLVERG 797
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 157/297 (52%), Gaps = 4/297 (1%)
Query: 263 FNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMKLLEEMI 321
+++++D LCK ++ A L+ +M K I TN TYNIL+ G+C G KLL +MI
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 322 QLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQND 381
+ P+ T++ +D++ K G + EA +L + M +G +P TY +I + +
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGI---APDTITYTSLIDGFCKEN 382
Query: 382 RMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYN 441
+++ +++ M+S GC P++ T+ +I G C +ID+ + +M +G D VTYN
Sbjct: 383 HLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYN 442
Query: 442 CFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKR 501
++ C+ K A +L+ M+ + P++ TY +L+ + + + A E ++++EK
Sbjct: 443 TLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKS 502
Query: 502 GCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDL 558
LD Y ++I G+ N +K ++A L + KG+K K ++ + L G L
Sbjct: 503 KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPL 559
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 144/294 (48%), Gaps = 16/294 (5%)
Query: 263 FNLLLDALCKC---CLVEYAEGLYKKMRKIINTNAE----TYNILVFGWCRVRSPTRGMK 315
+++++ C+C CL + M KII E T++ L+ G C + ++
Sbjct: 126 LSIMINCFCRCRKLCLA------FSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALE 179
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
L++ M+++GH+PD T NT ++ C +G EA+ L + M G P A TY ++
Sbjct: 180 LVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYG---CQPNAVTYGPVLN 236
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
+ ++ + +L+ M D Y II+G+C G +D A+ EM KG
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITT 296
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
+I+TYN + C+ + ++ KL MI+ + P+V T+++LI F + A E
Sbjct: 297 NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELH 356
Query: 496 QEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFL 549
+EM RG DT TY +I+G N ++A +++ +++KG + F+ +
Sbjct: 357 KEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILI 410
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 146/309 (47%), Gaps = 4/309 (1%)
Query: 250 KRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVR 308
+ + + +P++ N L++ LC A L KM + NA TY ++ C+
Sbjct: 183 RMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSG 242
Query: 309 SPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAK 368
M+LL +M + + D Y+ +D CK G + A +LF M KG T +
Sbjct: 243 QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTN---II 299
Query: 369 TYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEM 428
TY I+I R ++ KL+ MI P+V T+ +I+ GK+ EA + +EM
Sbjct: 300 TYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM 359
Query: 429 GNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDP 488
++G PD +TY + C ++A ++ M+ C P+++T+N+LI+ + + +
Sbjct: 360 IHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRI 419
Query: 489 DGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSF 548
D E +++M RG DT TY +I+G K A L +E++++ + +
Sbjct: 420 DDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKIL 479
Query: 549 LIQLSDLGD 557
L L D G+
Sbjct: 480 LDGLCDNGE 488
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 142/307 (46%), Gaps = 8/307 (2%)
Query: 213 DYMKRK-NKSTVPVEVLMTILRKYTEKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALC 271
D +KRK N + V VL+ K E L ++ K+ I P+ + L+D C
Sbjct: 323 DMIKRKINPNVVTFSVLIDSFVK--EGKLREAEEL-HKEMIHRGIAPDTITYTSLIDGFC 379
Query: 272 KCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNF 330
K ++ A + M K + N T+NIL+ G+C+ G++L +M G D
Sbjct: 380 KENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTV 439
Query: 331 TYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLM 390
TYNT + +C+ G + A +LF+ M ++ P TY I++ L N E+ ++
Sbjct: 440 TYNTLIQGFCELGKLNVAKELFQEMVSRKV---PPNIVTYKILLDGLCDNGESEKALEIF 496
Query: 391 GYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDN 450
+ S D+ Y II G+C K+D+A+ + KG P + TYN + LC
Sbjct: 497 EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKK 556
Query: 451 KKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTY 510
EA L+ +M E P TYN+LI D + + +E+++ G ++D T
Sbjct: 557 GPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTI 616
Query: 511 CVMIEGL 517
++I+ L
Sbjct: 617 KMVIDML 623
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 132/318 (41%), Gaps = 39/318 (12%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSP 310
I + P + F+ L A+ K + L K+M K I N T +I++ +CR R
Sbjct: 80 IHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKL 139
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
+ ++I+LG+ P+ T++T ++ C G
Sbjct: 140 CLAFSAMGKIIKLGYEPNTITFSTLINGLCLEG--------------------------- 172
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGN 430
R+ E +L+ M+ G PD+ T ++ G+CL GK EA +++M
Sbjct: 173 -----------RVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVE 221
Query: 431 KGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDG 490
G P+ VTY L V+C + ++ A++L +M E Y+++I + D
Sbjct: 222 YGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDN 281
Query: 491 AFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLI 550
AF + EME +G + TY ++I G N + ++ LL ++I + I F +
Sbjct: 282 AFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLID 341
Query: 551 QLSDLGDLHAIHKLSDHM 568
G L +L M
Sbjct: 342 SFVKEGKLREAEELHKEM 359
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 1/207 (0%)
Query: 369 TYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEM 428
T +IMI + ++ F MG +I G P+ T+ +I G+CL G++ EA + ++ M
Sbjct: 125 TLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRM 184
Query: 429 GNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDP 488
G+ PD++T N + LC + K EA+ L +M+E C P+ TY ++++ +
Sbjct: 185 VEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQT 244
Query: 489 DGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSF 548
A E ++ME+R LD Y ++I+GL + A +L E+ KGI ++
Sbjct: 245 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNIL 304
Query: 549 LIQLSDLGDLHAIHK-LSDHMRKFYNP 574
+ + G K L D +++ NP
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKINP 331
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 89/228 (39%), Gaps = 33/228 (14%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMK 315
P I FN+L++ CK ++ L++KM + + + TYN L+ G+C + +
Sbjct: 400 DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKE 459
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTIS------------ 363
L +EM+ P+ TY LD C G +A+++FE + +
Sbjct: 460 LFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMC 519
Query: 364 --------------------SPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVT 403
P KTY IMI L + + E L M G PD
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGW 579
Query: 404 TYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNK 451
TY +I G ++ K +EE+ G+ D T + +L D +
Sbjct: 580 TYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGR 627
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 96/222 (43%), Gaps = 3/222 (1%)
Query: 347 EAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYK 406
+A+DLF R + PT ++ + +A+ + + L M G ++ T
Sbjct: 71 DAIDLF---RDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 407 DIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIEL 466
+I C C K+ A+ + ++ GY P+ +T++ + LC + EAL+L RM+E+
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 467 RCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEA 526
P + T N L++ A +M + GC + TY ++ + +T A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 527 CSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHM 568
LL ++ + IKL K+ + L G L L + M
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 289
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 154/315 (48%), Gaps = 4/315 (1%)
Query: 255 KTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRG 313
K P+ + L+D LCK ++ A L +M+ + + + YN+L+ G C+ TR
Sbjct: 217 KCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRV 276
Query: 314 MKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIM 373
KL++ M G P+ TYNT + C G + +AV L E M S+ P TY +
Sbjct: 277 TKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMV---SSKCIPNDVTYGTL 333
Query: 374 IVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGY 433
I L + R + +L+ M G + Y +I G+ GK +EA +M KG
Sbjct: 334 INGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGC 393
Query: 434 PPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFE 493
P+IV Y+ + LC K EA ++ RMI C+P+ TY+ L+ FF+ + A +
Sbjct: 394 KPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQ 453
Query: 494 TWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLS 553
W+EM+K GC+ + Y V+I+GL + +EA + +++ GIK + S + L
Sbjct: 454 VWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLC 513
Query: 554 DLGDLHAIHKLSDHM 568
+G + A KL M
Sbjct: 514 GIGSMDAALKLYHEM 528
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 106/213 (49%), Gaps = 3/213 (1%)
Query: 327 PDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEEC 386
P+ ++N + CK + A+++F M + P TY ++ L + +R++E
Sbjct: 185 PNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCL---PDGYTYCTLMDGLCKEERIDEA 241
Query: 387 FKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRV 446
L+ M S GC P Y +I+G+C G + K ++ M KG P+ VTYN +
Sbjct: 242 VLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHG 301
Query: 447 LCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLD 506
LC K ++A+ L RM+ +CIP+ TY LI+ + A ME+RG +L+
Sbjct: 302 LCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLN 361
Query: 507 TDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
Y V+I GLF K EEA SL ++ KG K
Sbjct: 362 QHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCK 394
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 110/226 (48%), Gaps = 7/226 (3%)
Query: 263 FNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMI 321
+++L+ L K E A L++KM K N Y++LV G CR P ++L MI
Sbjct: 365 YSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMI 424
Query: 322 QLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQND 381
G P+ +TY++ + + K G+ EAV +++ M G S Y+++I L
Sbjct: 425 ASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGC---SRNKFCYSVLIDGLCGVG 481
Query: 382 RMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYP---PDIV 438
R++E + M++ G PD Y II+G+C G +D A K EM + P PD+V
Sbjct: 482 RVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVV 541
Query: 439 TYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFE 484
TYN L LC K A+ L M++ C P V T N ++ E
Sbjct: 542 TYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSE 587
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 161/351 (45%), Gaps = 14/351 (3%)
Query: 211 MLDYMKRKNKSTVPV--EVLMTILRKYTEKYLTHVQKFAKKKRIRVKTQPEINAFNLLLD 268
+LD M+ + S PV VL+ L K + LT V K ++ E+ +N L+
Sbjct: 244 LLDEMQSEGCSPSPVIYNVLIDGLCKKGD--LTRVTKLVDNMFLKGCVPNEV-TYNTLIH 300
Query: 269 ALCKCCLVEYAEGLYKKM--RKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHR 326
LC ++ A L ++M K I N TY L+ G + R T ++LL M + G+
Sbjct: 301 GLCLKGKLDKAVSLLERMVSSKCI-PNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYH 359
Query: 327 PDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEEC 386
+ Y+ + K G EA+ L+ M KG P Y++++ L + + E
Sbjct: 360 LNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGC---KPNIVVYSVLVDGLCREGKPNEA 416
Query: 387 FKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRV 446
+++ MI+SGCLP+ TY +++G G +EA + +EM G + Y+ +
Sbjct: 417 KEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDG 476
Query: 447 LCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEM---EKRGC 503
LC + +EA+ ++ +M+ + P Y+ +I + D A + + EM E+
Sbjct: 477 LCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKS 536
Query: 504 NLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSD 554
D TY ++++GL A LL ++++G ++FL LS+
Sbjct: 537 QPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSE 587
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 2/173 (1%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKL 316
P ++ L+ K L E A ++K+M K + N Y++L+ G C V M +
Sbjct: 430 PNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMV 489
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
+M+ +G +PD Y++ + C G + A+ L+ M + S P TY I++
Sbjct: 490 WSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDG 549
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVC-LCGKIDEAYKFLEEM 428
L + L+ M+ GC PDV T + + D+ FLEE+
Sbjct: 550 LCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEEL 602
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 67/136 (49%), Gaps = 4/136 (2%)
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIE----LRCIPSVQTYNMLISMFFEMDDPDGAF 492
+ ++N L V+ + L+ Y ++ + P+ ++N++I ++ D A
Sbjct: 148 VKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAI 207
Query: 493 ETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQL 552
E ++ M +R C D TYC +++GL + +EA LL+E+ ++G ++ + L
Sbjct: 208 EVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGL 267
Query: 553 SDLGDLHAIHKLSDHM 568
GDL + KL D+M
Sbjct: 268 CKKGDLTRVTKLVDNM 283
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 143/289 (49%), Gaps = 6/289 (2%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMKL 316
P + +N L+D CK ++ L + M K + N +YN+++ G CR +
Sbjct: 238 PNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFV 297
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
L EM + G+ D TYNT + YCK G +A+ + M G T P+ TY +I +
Sbjct: 298 LTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLT---PSVITYTSLIHS 354
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
+ + M + + M G P+ TY +++G G ++EAY+ L EM + G+ P
Sbjct: 355 MCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPS 414
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQ 496
+VTYN + C K E+A+ + M E P V +Y+ ++S F D D A +
Sbjct: 415 VVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKR 474
Query: 497 EMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKF 545
EM ++G DT TY +I+G +T+EAC L EE++ G LP +F
Sbjct: 475 EMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG--LPPDEF 521
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 149/286 (52%), Gaps = 5/286 (1%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMK 315
+P + ++N++++ LC+ ++ + +M R+ + + TYN L+ G+C+ + + +
Sbjct: 272 EPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALV 331
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
+ EM++ G P TY + + + CKAG + A++ + MR +G P +TY ++
Sbjct: 332 MHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLC---PNERTYTTLVD 388
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
+Q M E ++++ M +G P V TY +I G C+ GK+++A LE+M KG P
Sbjct: 389 GFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSP 448
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
D+V+Y+ L C + +EAL++ M+E P TY+ LI F E A + +
Sbjct: 449 DVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLY 508
Query: 496 QEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLP 541
+EM + G D TY +I E+A L E++ KG+ LP
Sbjct: 509 EEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGV-LP 553
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 131/293 (44%), Gaps = 19/293 (6%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMKL 316
P + +N L++ C +E A + + M+ K ++ + +Y+ ++ G+CR +++
Sbjct: 413 PSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRV 472
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
EM++ G +PD TY++ + +C+ EA DL+E M G P TY +I
Sbjct: 473 KREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGL---PPDEFTYTALINA 529
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
+E+ +L M+ G LPDV TY +I G+ + EA + L ++ + P
Sbjct: 530 YCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPS 589
Query: 437 IVTY-----NC----------FLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISM 481
VTY NC ++ C EA +++ M+ P YN++I
Sbjct: 590 DVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHG 649
Query: 482 FFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVI 534
D A+ ++EM K G L T T +++ L K E S++ V+
Sbjct: 650 HCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVL 702
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 127/291 (43%), Gaps = 24/291 (8%)
Query: 296 TYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFM 355
TYN L+ G C + +LE+M + G PD +Y+T L +C++ + EA+ + M
Sbjct: 417 TYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREM 476
Query: 356 RTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLC 415
KG P TY+ +I + R +E L M+ G PD TY +I C+
Sbjct: 477 VEKGI---KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCME 533
Query: 416 GKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTY 475
G +++A + EM KG PD+VTY+ + L ++ EA +L ++ +PS TY
Sbjct: 534 GDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTY 593
Query: 476 NMLIS------------------MFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGL 517
+ LI M M + D FE+ M + D Y +MI G
Sbjct: 594 HTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFES---MLGKNHKPDGTAYNIMIHGH 650
Query: 518 FNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHM 568
+A +L +E++ G L + + L G ++ ++ + H+
Sbjct: 651 CRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHV 701
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 142/347 (40%), Gaps = 43/347 (12%)
Query: 268 DALCKCCLVEYAEGLYKKMRKIIN---TNAETYNILVFGWCRVRSPTRGMKLLEEMIQLG 324
D K EYA ++K +++ + + + ++++V + R+ + + ++ G
Sbjct: 105 DVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHG 164
Query: 325 HRPDNFTYNTALDTYCKAGM-ITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRM 383
P +YN LD ++ I+ A ++F+ M + SP TY I+I +
Sbjct: 165 FMPGVLSYNAVLDATIRSKRNISFAENVFKEML---ESQVSPNVFTYNILIRGFCFAGNI 221
Query: 384 EECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCF 443
+ L M + GCLP+V TY +I+G C KID+ +K L M KG P++++YN
Sbjct: 222 DVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVV 281
Query: 444 LRVLCDNKKSEE-----------------------------------ALKLYGRMIELRC 468
+ LC + +E AL ++ M+
Sbjct: 282 INGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGL 341
Query: 469 IPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACS 528
PSV TY LI + + + A E +M RG + TY +++G EA
Sbjct: 342 TPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYR 401
Query: 529 LLEEVINKGIKLPYKKFDSFLIQLSDLGDLH-AIHKLSDHMRKFYNP 574
+L E+ + G +++ + G + AI L D K +P
Sbjct: 402 VLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSP 448
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 114/296 (38%), Gaps = 54/296 (18%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKL 316
P++ +++ +L C+ V+ A + ++M K I + TY+ L+ G+C R L
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL 507
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
EEM+++G PD FTY ++ YC G + +A+ L M KG P TY+++I
Sbjct: 508 YEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL---PDVVTYSVLING 564
Query: 377 LAQNDRMEEC------------------------------FKLMGYMISSGCL------- 399
L + R E FK + +I C+
Sbjct: 565 LNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEA 624
Query: 400 -------------PDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRV 446
PD T Y +I G C G I +AY +EM G+ VT ++
Sbjct: 625 DQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKA 684
Query: 447 LCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRG 502
L K E + ++ + + +L+ + + D + EM K G
Sbjct: 685 LHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDG 740
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 65/140 (46%), Gaps = 3/140 (2%)
Query: 300 LVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKG 359
L+ G+C T ++ E M+ H+PD YN + +C+AG I +A L++ M G
Sbjct: 611 LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSG 670
Query: 360 STISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKID 419
+ + T ++ L + ++ E ++ +++ S L + K ++E G +D
Sbjct: 671 FLLHTVTV---IALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMD 727
Query: 420 EAYKFLEEMGNKGYPPDIVT 439
L EM G+ P+ ++
Sbjct: 728 VVLDVLAEMAKDGFLPNGIS 747
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 201/416 (48%), Gaps = 14/416 (3%)
Query: 138 LEKALDQLAIPLSTPLVTGVLHRLRYDEKIAFRFFTWAGNQENYSHEPCAYNDMMDILSS 197
+++ LD+ I L+ LV V++R R D K A+ Q + YN+++D+L
Sbjct: 96 IKRILDKCGIDLTEELVLEVVNRNRSDWKPAYILSQLVVKQSVHLSSSMLYNEILDVLG- 154
Query: 198 TKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEKYLTHVQKFAKKKRIRVKTQ 257
K+++F + D M +++ V + +L +Y + ++R
Sbjct: 155 ---KMRRFEEFHQVFDEMSKRD-GFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGID 210
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLL 317
++ AF+ LL LC+ VE+AE L+ R+ + + N+++ GWC + + +
Sbjct: 211 DDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVHEAKRFW 270
Query: 318 EEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTL 377
+++I RPD +Y T ++ K G + +A++L+ R T +P K +I L
Sbjct: 271 KDIIASKCRPDVVSYGTMINALTKKGKLGKAMELY---RAMWDTRRNPDVKICNNVIDAL 327
Query: 378 AQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYP--P 435
R+ E ++ + G P+V TY +++ +C + ++ ++ +EEM KG P
Sbjct: 328 CFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSP 387
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
+ VT++ L+ +++S++ + RM + +C + YN++ ++ + D + E W
Sbjct: 388 NDVTFSYLLKY---SQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIW 444
Query: 496 QEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQ 551
EME+ G D TY + I GL K EA S +E+++KG+ +P + + L Q
Sbjct: 445 SEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGM-VPEPRTEMLLNQ 499
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 140/269 (52%), Gaps = 4/269 (1%)
Query: 259 EINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKLL 317
++ ++N++++ LC+C A + KM K + T + L+ G+C+ + L+
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 162
Query: 318 EEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTL 377
+M ++G RPD YNT +D CK G++ +AV+LF+ M G A TY ++ L
Sbjct: 163 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGV---RADAVTYNSLVAGL 219
Query: 378 AQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDI 437
+ R + +LM M+ +P+V T+ +I+ GK EA K EEM + PD+
Sbjct: 220 CCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDV 279
Query: 438 VTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQE 497
TYN + LC + + +EA ++ M+ C+P V TYN LI+ F + D + ++E
Sbjct: 280 FTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFRE 339
Query: 498 MEKRGCNLDTDTYCVMIEGLFNCNKTEEA 526
M +RG DT TY +I+G F + + A
Sbjct: 340 MAQRGLVGDTITYNTIIQGYFQAGRPDAA 368
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 142/284 (50%), Gaps = 7/284 (2%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMK 315
+P++ +N ++D CK LV A L+ +M R + +A TYN LV G C + +
Sbjct: 171 RPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAAR 230
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
L+ +M+ P+ T+ +D + K G +EA+ L+E M + P TY +I
Sbjct: 231 LMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRR---CVDPDVFTYNSLIN 287
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
L + R++E +++ M++ GCLPDV TY +I G C ++DE K EM +G
Sbjct: 288 GLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVG 347
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
D +TYN ++ + + A +++ RM P+++TY++L+ + A +
Sbjct: 348 DTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLF 404
Query: 496 QEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
+ M+K LD TY ++I G+ E+A L + KG+K
Sbjct: 405 ENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLK 448
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 108/216 (50%), Gaps = 7/216 (3%)
Query: 256 TQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGM 314
P++ +N L++ LC V+ A+ + M K + TYN L+ G+C+ + G
Sbjct: 275 VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGT 334
Query: 315 KLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMI 374
KL EM Q G D TYNT + Y +AG A ++F M ++ P +TY+I++
Sbjct: 335 KLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR------PNIRTYSILL 388
Query: 375 VTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYP 434
L N R+E+ L M S D+TTY +I G+C G +++A+ + KG
Sbjct: 389 YGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLK 448
Query: 435 PDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIP 470
PD+V+Y + C ++ +++ LY +M E +P
Sbjct: 449 PDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 109/246 (44%), Gaps = 7/246 (2%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKL 316
P + F ++D K A LY++M R+ ++ + TYN L+ G C ++
Sbjct: 242 PNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQM 301
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
L+ M+ G PD TYNT ++ +CK+ + E LF M +G + T T
Sbjct: 302 LDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQ 361
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
+ D +E F M P++ TY ++ G+C+ ++++A E M D
Sbjct: 362 AGRPDAAQEIFSRMDSR------PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELD 415
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQ 496
I TYN + +C E+A L+ + P V +Y +IS F D + ++
Sbjct: 416 ITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYR 475
Query: 497 EMEKRG 502
+M++ G
Sbjct: 476 KMQEDG 481
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 93/211 (44%), Gaps = 1/211 (0%)
Query: 365 PTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKF 424
P+ ++ ++ +A++ + L +M G D+ +Y +I +C C + A
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 425 LEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFE 484
+ +M GY PD+VT + + C + +A+ L +M E+ P V YN +I +
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 485 MDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKK 544
+ + A E + ME+ G D TY ++ GL + +A L+ +++ + I
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 545 FDSFLIQLSDLGDLHAIHKLSDHM-RKFYNP 574
F + + G KL + M R+ +P
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDP 277
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 80/196 (40%), Gaps = 1/196 (0%)
Query: 358 KGSTISSP-TAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCG 416
KG+ + P ++ + T + +EE L MI S LP + + ++ +
Sbjct: 24 KGNPVIVPFISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSK 83
Query: 417 KIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYN 476
D M G D+ +YN + LC + AL + G+M++ P V T +
Sbjct: 84 NYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVS 143
Query: 477 MLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINK 536
LI+ F + + A + +ME+ G D Y +I+G +A L + +
Sbjct: 144 SLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERD 203
Query: 537 GIKLPYKKFDSFLIQL 552
G++ ++S + L
Sbjct: 204 GVRADAVTYNSLVAGL 219
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/459 (25%), Positives = 194/459 (42%), Gaps = 63/459 (13%)
Query: 157 VLHRLRYDEKIAFRFFTWAGNQENYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMK 216
V+ +L + I FRF+ ++ + N H YN +L+ + K + M + MK
Sbjct: 75 VVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYN----LLTRSLCKAGLHDLAGQMFECMK 130
Query: 217 RKNKSTVPVEVLMTILRKYTEKYLTHVQKFAKKKRIRVKTQPEINAF---------NLLL 267
S P L+ L V FA+K ++ T + +F N LL
Sbjct: 131 SDGVS--PNNRLLGFL----------VSSFAEKGKLHFATALLLQSFEVEGCCMVVNSLL 178
Query: 268 DALCKCCLVEYAEGLYKKMRKIINTN-AETYNILVFGWCRVRSPTRGMKLLEEMIQLGHR 326
+ L K VE A L+ + + + N +T+NIL+ G C V + ++LL M G
Sbjct: 179 NTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCE 238
Query: 327 PDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEEC 386
PD TYNT + +CK+ + +A ++F+ K ++ SP TY MI + +M E
Sbjct: 239 PDIVTYNTLIQGFCKSNELNKASEMFK--DVKSGSVCSPDVVTYTSMISGYCKAGKMREA 296
Query: 387 FKLM-----------------------------------GYMISSGCLPDVTTYKDIIEG 411
L+ G MIS GC PDV T+ +I+G
Sbjct: 297 SSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDG 356
Query: 412 VCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPS 471
C G++ + ++ EEM +G P+ TY+ + LC+ + +A +L G++ IP
Sbjct: 357 YCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQ 416
Query: 472 VQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLE 531
YN +I F + + A +EMEK+ C D T+ ++I G + EA S+
Sbjct: 417 PFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFH 476
Query: 532 EVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMRK 570
+++ G S L L G + L+ RK
Sbjct: 477 KMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARK 515
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 121/267 (45%), Gaps = 11/267 (4%)
Query: 309 SPTRGMKLLE-EMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTA 367
+P G + E +L R +TYN + CKAG+ A +FE M++ G SP
Sbjct: 82 NPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGV---SPNN 138
Query: 368 KTYAIMIVTLAQNDRME--ECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFL 425
+ ++ + A+ ++ L + + C+ ++ + ++++A K
Sbjct: 139 RLLGFLVSSFAEKGKLHFATALLLQSFEVEGCCM----VVNSLLNTLVKLDRVEDAMKLF 194
Query: 426 EEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEM 485
+E D T+N +R LC K+E+AL+L G M C P + TYN LI F +
Sbjct: 195 DEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKS 254
Query: 486 DDPDGAFETWQEMEKRG-CNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKK 544
++ + A E +++++ C+ D TY MI G K EA SLL++++ GI
Sbjct: 255 NELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVT 314
Query: 545 FDSFLIQLSDLGDLHAIHKLSDHMRKF 571
F+ + + G++ ++ M F
Sbjct: 315 FNVLVDGYAKAGEMLTAEEIRGKMISF 341
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/459 (25%), Positives = 194/459 (42%), Gaps = 63/459 (13%)
Query: 157 VLHRLRYDEKIAFRFFTWAGNQENYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMK 216
V+ +L + I FRF+ ++ + N H YN +L+ + K + M + MK
Sbjct: 75 VVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYN----LLTRSLCKAGLHDLAGQMFECMK 130
Query: 217 RKNKSTVPVEVLMTILRKYTEKYLTHVQKFAKKKRIRVKTQPEINAF---------NLLL 267
S P L+ L V FA+K ++ T + +F N LL
Sbjct: 131 SDGVS--PNNRLLGFL----------VSSFAEKGKLHFATALLLQSFEVEGCCMVVNSLL 178
Query: 268 DALCKCCLVEYAEGLYKKMRKIINTN-AETYNILVFGWCRVRSPTRGMKLLEEMIQLGHR 326
+ L K VE A L+ + + + N +T+NIL+ G C V + ++LL M G
Sbjct: 179 NTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCE 238
Query: 327 PDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEEC 386
PD TYNT + +CK+ + +A ++F+ K ++ SP TY MI + +M E
Sbjct: 239 PDIVTYNTLIQGFCKSNELNKASEMFK--DVKSGSVCSPDVVTYTSMISGYCKAGKMREA 296
Query: 387 FKLM-----------------------------------GYMISSGCLPDVTTYKDIIEG 411
L+ G MIS GC PDV T+ +I+G
Sbjct: 297 SSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDG 356
Query: 412 VCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPS 471
C G++ + ++ EEM +G P+ TY+ + LC+ + +A +L G++ IP
Sbjct: 357 YCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQ 416
Query: 472 VQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLE 531
YN +I F + + A +EMEK+ C D T+ ++I G + EA S+
Sbjct: 417 PFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFH 476
Query: 532 EVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMRK 570
+++ G S L L G + L+ RK
Sbjct: 477 KMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARK 515
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 121/267 (45%), Gaps = 11/267 (4%)
Query: 309 SPTRGMKLLE-EMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTA 367
+P G + E +L R +TYN + CKAG+ A +FE M++ G SP
Sbjct: 82 NPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGV---SPNN 138
Query: 368 KTYAIMIVTLAQNDRME--ECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFL 425
+ ++ + A+ ++ L + + C+ ++ + ++++A K
Sbjct: 139 RLLGFLVSSFAEKGKLHFATALLLQSFEVEGCCM----VVNSLLNTLVKLDRVEDAMKLF 194
Query: 426 EEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEM 485
+E D T+N +R LC K+E+AL+L G M C P + TYN LI F +
Sbjct: 195 DEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKS 254
Query: 486 DDPDGAFETWQEMEKRG-CNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKK 544
++ + A E +++++ C+ D TY MI G K EA SLL++++ GI
Sbjct: 255 NELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVT 314
Query: 545 FDSFLIQLSDLGDLHAIHKLSDHMRKF 571
F+ + + G++ ++ M F
Sbjct: 315 FNVLVDGYAKAGEMLTAEEIRGKMISF 341
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 156/315 (49%), Gaps = 4/315 (1%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMK 315
+ + +++++D+LCK + A L+ +M K I + TY+ L+ G C G K
Sbjct: 242 KASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAK 301
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
+L EMI PD T++ +D + K G + EA +L+ M T+G +P TY +I
Sbjct: 302 MLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI---APDTITYNSLID 358
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
+ + + E ++ M+S GC PD+ TY +I C ++D+ + E+ +KG P
Sbjct: 359 GFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIP 418
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
+ +TYN + C + K A +L+ M+ PSV TY +L+ + + + A E +
Sbjct: 419 NTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIF 478
Query: 496 QEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDL 555
++M+K L Y ++I G+ N +K ++A SL + +KG+K ++ + L
Sbjct: 479 EKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKK 538
Query: 556 GDLHAIHKLSDHMRK 570
G L L M++
Sbjct: 539 GSLSEADMLFRKMKE 553
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 128/261 (49%), Gaps = 4/261 (1%)
Query: 258 PEINAFNLLLDALCK-CCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKL 316
P+ +N L+D CK CL E + + K + TY+IL+ +C+ + GM+L
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
E+ G P+ TYNT + +C++G + A +LF+ M ++G P+ TY I++
Sbjct: 408 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGV---PPSVVTYGILLDG 464
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
L N + + ++ M S + Y II G+C K+D+A+ + +KG PD
Sbjct: 465 LCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPD 524
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQ 496
+VTYN + LC EA L+ +M E C P TYN+LI + E +
Sbjct: 525 VVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIE 584
Query: 497 EMEKRGCNLDTDTYCVMIEGL 517
EM+ G + D+ T ++I+ L
Sbjct: 585 EMKVCGFSADSSTIKMVIDML 605
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 115/242 (47%), Gaps = 3/242 (1%)
Query: 296 TYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFM 355
T++ LV G+C + + L++ M+++ RPD T +T ++ C G ++EA+ L + M
Sbjct: 142 TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM 201
Query: 356 RTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLC 415
G P TY ++ L ++ L M V Y +I+ +C
Sbjct: 202 VEYGF---QPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKD 258
Query: 416 GKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTY 475
G D+A EM KG D+VTY+ + LC++ K ++ K+ MI IP V T+
Sbjct: 259 GSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTF 318
Query: 476 NMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVIN 535
+ LI +F + A E + EM RG DT TY +I+G N EA + + +++
Sbjct: 319 SALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS 378
Query: 536 KG 537
KG
Sbjct: 379 KG 380
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 132/318 (41%), Gaps = 39/318 (12%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSP 310
I+ + P FN L A+ + + G K M I + T I++ +CR +
Sbjct: 62 IQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKL 121
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
+L +LG+ PD T++T ++ +C G ++EA
Sbjct: 122 LFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA---------------------- 159
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGN 430
+A DRM E + PD+ T +I G+CL G++ EA ++ M
Sbjct: 160 ------VALVDRMVEMKQR----------PDLVTVSTLINGLCLKGRVSEALVLIDRMVE 203
Query: 431 KGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDG 490
G+ PD VTY L LC + S AL L+ +M E SV Y+++I + D
Sbjct: 204 YGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDD 263
Query: 491 AFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLI 550
A + EME +G D TY +I GL N K ++ +L E+I + I F + +
Sbjct: 264 ALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALID 323
Query: 551 QLSDLGDLHAIHKLSDHM 568
G L +L + M
Sbjct: 324 VFVKEGKLLEAKELYNEM 341
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 106/246 (43%), Gaps = 7/246 (2%)
Query: 313 GMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYA- 371
+ L E MIQ P +N C A T+ DL KG ++ Y
Sbjct: 54 AIDLFESMIQSRPLPTPIDFNR----LCSAVARTKQYDLV-LGFCKGMELNGIEHDMYTM 108
Query: 372 -IMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGN 430
IMI + ++ F ++G G PD T+ ++ G CL G++ EA ++ M
Sbjct: 109 TIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVE 168
Query: 431 KGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDG 490
PD+VT + + LC + EAL L RM+E P TY +++ + +
Sbjct: 169 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSAL 228
Query: 491 AFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLI 550
A + +++ME+R Y ++I+ L ++A SL E+ KGIK + S +
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288
Query: 551 QLSDLG 556
L + G
Sbjct: 289 GLCNDG 294
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 94/228 (41%), Gaps = 33/228 (14%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMK 315
+P+I +++L+++ CK V+ L++++ K + N TYN LV G+C+ +
Sbjct: 382 EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKE 441
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTIS------------ 363
L +EM+ G P TY LD C G + +A+++FE M+ T+
Sbjct: 442 LFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMC 501
Query: 364 --------------------SPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVT 403
P TY +MI L + + E L M GC PD
Sbjct: 502 NASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDF 561
Query: 404 TYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNK 451
TY +I + + + +EEM G+ D T + +L D +
Sbjct: 562 TYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRR 609
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 194/426 (45%), Gaps = 63/426 (14%)
Query: 167 IAFRFFTWAGNQENYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVE 226
+++ FF W + + H + M+ IL+ K K F+ +LD + ++ + P+
Sbjct: 62 LSWSFFIWTDSLPSSKHSLQSSWKMILILT----KHKHFKTAHQLLDKLAQRELLSSPL- 116
Query: 227 VLMTILRKYTE--KYLTHVQK-----FAKKKRI--------RVKT---QPEINAFNLLLD 268
VL +++ +E + ++HV +AK I ++++ +P + A +LL+
Sbjct: 117 VLRSLVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLN 176
Query: 269 ALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRP 327
+L K L + ++KKM K+ + N YN+LV + P + KLL EM + G P
Sbjct: 177 SLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFP 236
Query: 328 DNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECF 387
D FTYNT + YCK M EA+ + + M G +P TY I ++ RM E
Sbjct: 237 DIFTYNTLISVYCKKSMHFEALSVQDRMERSGV---APNIVTYNSFIHGFSREGRMREAT 293
Query: 388 KLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVL 447
+L I + TY +I+G C IDEA + E M ++G+ P +VTYN LR L
Sbjct: 294 RLF-REIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKL 352
Query: 448 CDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDT 507
C++ + EA +L M + P T N LI+ + +++D A + ++M + G LD
Sbjct: 353 CEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDM 412
Query: 508 -----------------------------------DTYCVMIEGLFNCNKTEEACSLLEE 532
TY +++G +N NK +E LLEE
Sbjct: 413 YSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEE 472
Query: 533 VINKGI 538
+G+
Sbjct: 473 FEKRGL 478
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 152/350 (43%), Gaps = 14/350 (4%)
Query: 230 TILRKYTEKYLTHVQKFAKKKRI-RVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRK 288
T++ Y +K + H + + + R+ R P I +N + + + A L+++++
Sbjct: 243 TLISVYCKKSM-HFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD 301
Query: 289 IINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEA 348
+ N TY L+ G+CR+ ++L E M G P TYN+ L C+ G I EA
Sbjct: 302 DVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREA 361
Query: 349 VDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDI 408
L M K + T T +I + + M K+ MI SG D+ +YK +
Sbjct: 362 NRLLTEMSGKKIEPDNITCNT---LINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKAL 418
Query: 409 IEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRC 468
I G C +++ A + L M KG+ P TY+ + + K +E KL +
Sbjct: 419 IHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGL 478
Query: 469 IPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACS 528
V Y LI +++ D A ++ MEK+G D+ + M + K EA +
Sbjct: 479 CADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASA 538
Query: 529 LLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMRKFYNPAMAR 578
L + + N+ + + K + S I S GD +D +R F++ R
Sbjct: 539 LFDVMYNRRLMVNLKLYKS--ISASYAGD-------NDVLRFFWSHVGDR 579
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 106/230 (46%), Gaps = 4/230 (1%)
Query: 339 YCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGC 398
Y KAGMI +++ +FE +R+ G P + +++ +L + + +K+ M+ G
Sbjct: 143 YAKAGMINDSIVVFEQIRSCGL---KPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGV 199
Query: 399 LPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALK 458
+ ++ Y ++ G ++A K L EM KG PDI TYN + V C EAL
Sbjct: 200 VANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALS 259
Query: 459 LYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLF 518
+ RM P++ TYN I F A ++E+ K + TY +I+G
Sbjct: 260 VQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREI-KDDVTANHVTYTTLIDGYC 318
Query: 519 NCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHM 568
N +EA L E + ++G ++S L +L + G + ++L M
Sbjct: 319 RMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEM 368
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 183/392 (46%), Gaps = 23/392 (5%)
Query: 123 KVCNTMMDNLHGFNNLEKALDQLAIPLSTPLV----TGVLHRLRYDEK-----IAFRFFT 173
+V T+ + GFN+ + LD+L + +S LV G+L L YD K +A+RFF
Sbjct: 79 RVLVTLQLDESGFNS-KSVLDELNVRVSGLLVREVLVGILRNLSYDNKARCAKLAYRFFL 137
Query: 174 WAGNQENYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILR 233
W+G QE + H +Y+ +M I + +R+V +M+ ++ ++
Sbjct: 138 WSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMV-----QDGFPTTARTFNLLIC 192
Query: 234 KYTEKYLTH--VQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKII 290
E L V +F K K + P +++N +L++L + E +YK+M
Sbjct: 193 SCGEAGLAKQAVVQFMKSKTFNYR--PFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGF 250
Query: 291 NTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVD 350
+ + TYNIL++ R+ R +L +EM + G PD++TYN L K A+
Sbjct: 251 SPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALT 310
Query: 351 LFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIE 410
M+ G P+ Y +I L++ +E C + M+ +GC PDV Y +I
Sbjct: 311 TLNHMKEVGI---DPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMIT 367
Query: 411 GVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIP 470
G + G++D+A + EM KG P++ TYN +R LC + EA L M C P
Sbjct: 368 GYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNP 427
Query: 471 SVQTYNMLISMFFEMDDPDGAFETWQEMEKRG 502
+ Y+ L+S + A + +EM K+G
Sbjct: 428 NFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 142/347 (40%), Gaps = 48/347 (13%)
Query: 264 NLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNIL--VFGWCRVRSPTRGM-KLLEEM 320
NL D +C + Y L+ ++ +Y++L +F C + M +L++EM
Sbjct: 119 NLSYDNKARCAKLAYRFFLWSGEQECFRHTVNSYHLLMKIFAEC---GEYKAMWRLVDEM 175
Query: 321 IQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIM--IVTLA 378
+Q G T+N + + +AG+ +AV +FM++K AI+ ++ +
Sbjct: 176 VQDGFPTTARTFNLLICSCGEAGLAKQAV--VQFMKSKTFNYRPFKHSYNAILNSLLGVK 233
Query: 379 QNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIV 438
Q +E +K M+ G PDV TY ++ GK+D + +EM G+ PD
Sbjct: 234 QYKLIEWVYK---QMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSY 290
Query: 439 TYNCFLRVLCDNKKSEEALK-----------------------------------LYGRM 463
TYN L +L K AL M
Sbjct: 291 TYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEM 350
Query: 464 IELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKT 523
++ C P V Y ++I+ + + D A E ++EM +G + TY MI GL +
Sbjct: 351 VKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEF 410
Query: 524 EEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMRK 570
EAC LL+E+ ++G + + + + L G L K+ M K
Sbjct: 411 REACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVK 457
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 112/262 (42%), Gaps = 13/262 (4%)
Query: 180 NYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEKY 239
NY +YN +++ L VKQ++++ + M S +VL + +T
Sbjct: 214 NYRPFKHSYNAILNSLLG----VKQYKLIEWVYKQMLEDGFSP---DVLTYNILLWTNYR 266
Query: 240 LTHVQKFAK--KKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAET 296
L + +F + + R P+ +N+LL L K A M+++ I+ +
Sbjct: 267 LGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLH 326
Query: 297 YNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMR 356
Y L+ G R + L+EM++ G RPD Y + Y +G + +A ++F M
Sbjct: 327 YTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMT 386
Query: 357 TKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCG 416
KG P TY MI L E L+ M S GC P+ Y ++ + G
Sbjct: 387 VKGQL---PNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAG 443
Query: 417 KIDEAYKFLEEMGNKGYPPDIV 438
K+ EA K + EM KG+ +V
Sbjct: 444 KLSEARKVIREMVKKGHYVHLV 465
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 154/313 (49%), Gaps = 5/313 (1%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMKL 316
P + +N L++ CK ++E A + + M + ++ N TYN L+ G+C+ + + M +
Sbjct: 391 PNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGV 449
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
L +M++ PD TYN+ +D C++G A L M +G P TY MI +
Sbjct: 450 LNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV---PDQWTYTSMIDS 506
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
L ++ R+EE L + G P+V Y +I+G C GK+DEA+ LE+M +K P+
Sbjct: 507 LCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPN 566
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQ 496
+T+N + LC + K +EA L +M+++ P+V T +LI + D D A+ +Q
Sbjct: 567 SLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQ 626
Query: 497 EMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLG 556
+M G D TY I+ + +A ++ ++ G+ + S + DLG
Sbjct: 627 QMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLG 686
Query: 557 DLHAIHKLSDHMR 569
+ + MR
Sbjct: 687 QTNFAFDVLKRMR 699
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 192/415 (46%), Gaps = 20/415 (4%)
Query: 151 TPLVTGVLHRLRYDEKIAFRFFTWAGNQENYSHEPCAYNDMMDILSSTKYKVKQFRIVCD 210
+P L L D K A F W Y H +Y ++ +L + Y F+I
Sbjct: 89 SPSHVSSLFSLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLL 148
Query: 211 MLDYMKRKNKSTVPVEVLMTILRKYTEKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDAL 270
M+ KS V + +L +K K +R +K + I +N LL++L
Sbjct: 149 MI-------KSCDSVGDALYVL--------DLCRKMNKDERFELKYKLIIGCYNTLLNSL 193
Query: 271 CKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDN 329
+ LV+ + +Y +M + N TYN +V G+C++ + + + ++++ G PD
Sbjct: 194 ARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDF 253
Query: 330 FTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKL 389
FTY + + YC+ + A +F M KG + A T+ I + +A+ R++E L
Sbjct: 254 FTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCR-RNEVAYTHLIHGLCVAR--RIDEAMDL 310
Query: 390 MGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCD 449
M C P V TY +I+ +C + EA ++EM G P+I TY + LC
Sbjct: 311 FVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCS 370
Query: 450 NKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDT 509
K E+A +L G+M+E +P+V TYN LI+ + + + A + + ME R + +T T
Sbjct: 371 QCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRT 430
Query: 510 YCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKL 564
Y +I+G N +A +L +++ + + ++S + G+ + ++L
Sbjct: 431 YNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 159/371 (42%), Gaps = 60/371 (16%)
Query: 255 KTQPEINAFNLLLDALCKCCLVEYAEGLYKKM--RKIINTNAETYNILVFGWCRVRSPTR 312
K P +N L+ CK V A G+ KM RK++ + TYN L+ G CR +
Sbjct: 423 KLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVL-PDVVTYNSLIDGQCRSGNFDS 480
Query: 313 GMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAI 372
+LL M G PD +TY + +D+ CK+ + EA DLF+ + KG +P Y
Sbjct: 481 AYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGV---NPNVVMYTA 537
Query: 373 MIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKI-------------- 418
+I + +++E ++ M+S CLP+ T+ +I G+C GK+
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIG 597
Query: 419 ---------------------DEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEAL 457
D AY ++M + G PD TY F++ C + +A
Sbjct: 598 LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAE 657
Query: 458 KLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGL 517
+ +M E P + TY+ LI + ++ + AF+ + M GC T+ +I+ L
Sbjct: 658 DMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL 717
Query: 518 F------------------NCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLH 559
N + + LLE+++ + K ++ ++ + ++G+L
Sbjct: 718 LEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLR 777
Query: 560 AIHKLSDHMRK 570
K+ DHM++
Sbjct: 778 VAEKVFDHMQR 788
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 106/478 (22%), Positives = 177/478 (37%), Gaps = 101/478 (21%)
Query: 131 NLH-GFNNLEKALDQLAIP---LSTPLVTGVLHRLRYDEKIAFRFFTWAGNQENYSHEPC 186
N+H L K L++ +P L+ G +D A+R + N +
Sbjct: 442 NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDS--AYRLLSLM-NDRGLVPDQW 498
Query: 187 AYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMT-ILRKYTEKYLTHVQK 245
Y M+D L K K+ CD+ D +++K + P V+ T ++ Y +
Sbjct: 499 TYTSMIDSLC----KSKRVEEACDLFDSLEQKGVN--PNVVMYTALIDGYCKAGKVDEAH 552
Query: 246 FAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGW 304
+K + P FN L+ LC ++ A L +KM KI + T IL+
Sbjct: 553 LMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRL 612
Query: 305 CRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKG----- 359
+ ++M+ G +PD TY T + TYC+ G + +A D+ MR G
Sbjct: 613 LKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDL 672
Query: 360 ---------------------------STISSPTAKTYAIMIVTL--------------- 377
T P+ T+ +I L
Sbjct: 673 FTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPEL 732
Query: 378 -AQNDRME--ECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMG-NKGY 433
A ++ ME +L+ M+ P+ +Y+ +I G+C G + A K + M N+G
Sbjct: 733 CAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGI 792
Query: 434 PPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDP----- 488
P + +N L C KK EA K+ MI + +P +++ +LI ++ +
Sbjct: 793 SPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTS 852
Query: 489 ---------------------DGA---------FETWQEMEKRGCNLDTDTYCVMIEG 516
DG +E + MEK GC + TY ++IEG
Sbjct: 853 VFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 136/335 (40%), Gaps = 58/335 (17%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKL 316
P+ + ++D+LCK VE A L+ + +K +N N Y L+ G+C+ +
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLM 554
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKG----------------- 359
LE+M+ P++ T+N + C G + EA L E M G
Sbjct: 555 LEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLK 614
Query: 360 ---------------STISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTT 404
S+ + P A TY I T + R+ + +M M +G PD+ T
Sbjct: 615 DGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFT 674
Query: 405 YKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCD-----NKKSEEAL-- 457
Y +I+G G+ + A+ L+ M + G P T+ ++ L + K SE L
Sbjct: 675 YSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCA 734
Query: 458 -----------KLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLD 506
+L +M+E P+ ++Y LI E+ + A + + M++ N
Sbjct: 735 MSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQR---NEG 791
Query: 507 TDTYCVMIEGLFNC----NKTEEACSLLEEVINKG 537
++ L +C K EA +++++I G
Sbjct: 792 ISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVG 826
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/420 (25%), Positives = 187/420 (44%), Gaps = 43/420 (10%)
Query: 166 KIAFRFFTWAGNQENYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPV 225
+ AF F A Y+H Y+ ++ LS T+ RIV + R +
Sbjct: 24 RAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIV-----ELIRSQECKCDE 78
Query: 226 EVLMTILRKYTEKYLTHVQKFAKKKRIR--VKTQPEINAFNLLLDALCKCCLVEYAEGLY 283
+V +++++ Y + + Q KR+R +P I ++N LL+A + E L+
Sbjct: 79 DVALSVIKTYGKNSMPD-QALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLF 137
Query: 284 KKMRKI-INTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKA 342
+ N +TYN+L+ C+ + + L+ M + G +PD F+Y+T ++ KA
Sbjct: 138 AYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKA 197
Query: 343 GMITEAVDLFEFMRTKG---------------------------------STISSPTAKT 369
G + +A++LF+ M +G + P KT
Sbjct: 198 GKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKT 257
Query: 370 YAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMG 429
+ IMI L++ R+++C K+ M + D+ TY +I G+C G +D+A E+
Sbjct: 258 HNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELD 317
Query: 430 NKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPD 489
+ D+VTYN L C K +E+L+L+ R++E + ++ +YN+LI E D
Sbjct: 318 ERKASIDVVTYNTMLGGFCRCGKIKESLELW-RIMEHKNSVNIVSYNILIKGLLENGKID 376
Query: 490 GAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFL 549
A W+ M +G D TY + I GL +A +++EV + G L + S +
Sbjct: 377 EATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASII 436
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 129/273 (47%), Gaps = 4/273 (1%)
Query: 255 KTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRG 313
K I ++N+L+ L + ++ A +++ M K + TY I + G C +
Sbjct: 354 KNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKA 413
Query: 314 MKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIM 373
+ +++E+ G D + Y + +D CK + EA +L + M G ++S +
Sbjct: 414 LGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNA---L 470
Query: 374 IVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGY 433
I L ++ R+ E + M +GC P V +Y +I G+C GK EA F++EM G+
Sbjct: 471 IGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGW 530
Query: 434 PPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFE 493
PD+ TY+ L LC ++K + AL+L+ + ++ V +N+LI + D A
Sbjct: 531 KPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMT 590
Query: 494 TWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEA 526
ME R C + TY ++EG F + A
Sbjct: 591 VMANMEHRNCTANLVTYNTLMEGFFKVGDSNRA 623
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 131/303 (43%), Gaps = 3/303 (0%)
Query: 255 KTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGM 314
K ++ +N +L C+C ++ + L++ M + N +YNIL+ G
Sbjct: 320 KASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEAT 379
Query: 315 KLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMI 374
+ M G+ D TY + C G + +A+ + + + + G + YA +I
Sbjct: 380 MIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLD---VYAYASII 436
Query: 375 VTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYP 434
L + R+EE L+ M G + +I G+ ++ EA FL EMG G
Sbjct: 437 DCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCR 496
Query: 435 PDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFET 494
P +V+YN + LC K EA M+E P ++TY++L+ D A E
Sbjct: 497 PTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALEL 556
Query: 495 WQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSD 554
W + + G D + ++I GL + K ++A +++ + ++ +++ +
Sbjct: 557 WHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFK 616
Query: 555 LGD 557
+GD
Sbjct: 617 VGD 619
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 106/226 (46%), Gaps = 3/226 (1%)
Query: 334 TALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYM 393
+ + TY K M +A+D+F+ MR P ++Y ++ + + + L Y
Sbjct: 83 SVIKTYGKNSMPDQALDVFKRMREIFGC--EPAIRSYNTLLNAFVEAKQWVKVESLFAYF 140
Query: 394 ISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKS 453
++G P++ TY +I+ C + ++A FL+ M +G+ PD+ +Y+ + L K
Sbjct: 141 ETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKL 200
Query: 454 EEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQE-MEKRGCNLDTDTYCV 512
++AL+L+ M E P V YN+LI F + D A E W +E + T+ +
Sbjct: 201 DDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNI 260
Query: 513 MIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDL 558
MI GL C + ++ + E + + + S + L D G++
Sbjct: 261 MISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNV 306
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 109/257 (42%), Gaps = 39/257 (15%)
Query: 259 EINAFNLLLDALCKCCLVEYAEGLYKKMRK-IINTNAETYNILVFGWCRVRSPTRGMKLL 317
++ A+ ++D LCK +E A L K+M K + N+ N L+ G R L
Sbjct: 428 DVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFL 487
Query: 318 EEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTL 377
EM + G RP +YN + CKAG EA + M G P KTY+I++ L
Sbjct: 488 REMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGW---KPDLKTYSILLCGL 544
Query: 378 AQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNK------ 431
++ +++ +L + SG DV + +I G+C GK+D+A + M ++
Sbjct: 545 CRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANL 604
Query: 432 -----------------------------GYPPDIVTYNCFLRVLCDNKKSEEALKLYGR 462
G PDI++YN ++ LC + A++ +
Sbjct: 605 VTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDD 664
Query: 463 MIELRCIPSVQTYNMLI 479
P+V T+N+L+
Sbjct: 665 ARNHGIFPTVYTWNILV 681
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 91/194 (46%), Gaps = 4/194 (2%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMK 315
+P + ++N+L+ LCK A K+M + +TY+IL+ G CR R ++
Sbjct: 496 RPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALE 555
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
L + +Q G D +N + C G + +A+ + M + T + T T
Sbjct: 556 LWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFF 615
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
+ ++R + GYM G PD+ +Y I++G+C+C + A +F ++ N G P
Sbjct: 616 KVGDSNRAT---VIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFP 672
Query: 436 DIVTYNCFLRVLCD 449
+ T+N +R + +
Sbjct: 673 TVYTWNILVRAVVN 686
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 132/264 (50%), Gaps = 4/264 (1%)
Query: 276 VEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNT 334
VEY +YK+M R+ I N T+N+++ C+ + ++E+M G P+ +YNT
Sbjct: 207 VEY---VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNT 263
Query: 335 ALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMI 394
+D YCK G + ++ SP T+ I+I ++D + K+ M+
Sbjct: 264 LIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEML 323
Query: 395 SSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSE 454
P+V +Y +I G+C GKI EA ++M + G P+++TYN + C N +
Sbjct: 324 DQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLK 383
Query: 455 EALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMI 514
EAL ++G + +P+ + YNMLI + ++ D F +EME+ G D TY +I
Sbjct: 384 EALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLI 443
Query: 515 EGLFNCNKTEEACSLLEEVINKGI 538
GL E A L +++ +KG+
Sbjct: 444 AGLCRNGNIEAAKKLFDQLTSKGL 467
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 153/292 (52%), Gaps = 6/292 (2%)
Query: 249 KKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRV 307
K+ + P + FN+L+D K + + ++K+M + + N +YN L+ G C
Sbjct: 285 KEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNG 344
Query: 308 RSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTA 367
+ + + ++M+ G +P+ TYN ++ +CK M+ EA+D+F ++ +G+ PT
Sbjct: 345 GKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAV---PTT 401
Query: 368 KTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEE 427
+ Y ++I + ++++ F L M G +PDV TY +I G+C G I+ A K ++
Sbjct: 402 RMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQ 461
Query: 428 MGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDD 487
+ +KG PD+VT++ + C +S +A L M ++ P TYN+++ + + +
Sbjct: 462 LTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGN 520
Query: 488 PDGAFETWQEMEK-RGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGI 538
A +MEK R ++ +Y V+++G K E+A LL E++ KG+
Sbjct: 521 LKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGL 572
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 146/311 (46%), Gaps = 43/311 (13%)
Query: 245 KFAKKKRIRVKTQPEINAFNLLLDALCKCC--------------------LVEY------ 278
++ K+ IR K QP + FN++++ALCK +V Y
Sbjct: 208 EYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDG 267
Query: 279 ------------AEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGH 325
A+ + K+M ++ N T+NIL+ G+ + + MK+ +EM+
Sbjct: 268 YCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDV 327
Query: 326 RPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEE 385
+P+ +YN+ ++ C G I+EA+ + + M + G P TY +I +ND ++E
Sbjct: 328 KPNVISYNSLINGLCNGGKISEAISMRDKMVSAG---VQPNLITYNALINGFCKNDMLKE 384
Query: 386 CFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLR 445
+ G + G +P Y +I+ C GKID+ + EEM +G PD+ TYNC +
Sbjct: 385 ALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIA 444
Query: 446 VLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNL 505
LC N E A KL+ ++ + +P + T+++L+ + + A +EM K G
Sbjct: 445 GLCRNGNIEAAKKLFDQLTS-KGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKP 503
Query: 506 DTDTYCVMIEG 516
TY ++++G
Sbjct: 504 RHLTYNIVMKG 514
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 127/254 (50%), Gaps = 6/254 (2%)
Query: 318 EEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMI--- 374
+EMI+ +P+ FT+N ++ CK G + +A D+ E M+ G SP +Y +I
Sbjct: 212 KEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGC---SPNVVSYNTLIDGY 268
Query: 375 VTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYP 434
L N +M + ++ M+ + P++TT+ +I+G + + K +EM ++
Sbjct: 269 CKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVK 328
Query: 435 PDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFET 494
P++++YN + LC+ K EA+ + +M+ P++ TYN LI+ F + D A +
Sbjct: 329 PNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDM 388
Query: 495 WQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSD 554
+ ++ +G T Y ++I+ K ++ +L EE+ +GI ++ + L
Sbjct: 389 FGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCR 448
Query: 555 LGDLHAIHKLSDHM 568
G++ A KL D +
Sbjct: 449 NGNIEAAKKLFDQL 462
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 108/267 (40%), Gaps = 41/267 (15%)
Query: 249 KKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRV 307
K+ + +P + ++N L++ LC + A + KM + N TYN L+ G+C+
Sbjct: 320 KEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKN 379
Query: 308 RSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTA 367
+ + + G P YN +D YCK G I + L E M +G P
Sbjct: 380 DMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV---PDV 436
Query: 368 KTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEE 427
TY +I L +N +E KL + S G LPD+ T+ ++EG C G+ +A L+E
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKE 495
Query: 428 MGNKGYPP------------------------------------DIVTYNCFLRVLCDNK 451
M G P ++ +YN L+
Sbjct: 496 MSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKG 555
Query: 452 KSEEALKLYGRMIELRCIPSVQTYNML 478
K E+A L M+E +P+ TY ++
Sbjct: 556 KLEDANMLLNEMLEKGLVPNRITYEIV 582
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 138/314 (43%), Gaps = 34/314 (10%)
Query: 130 DNLHG-FNNLEKALDQLAIP---LSTPLVTGVLHRLRYDEKIAFR-FFTWAGNQENYSHE 184
DNL G ++ LDQ P L+ G+ + + E I+ R AG Q N
Sbjct: 310 DNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNL--- 366
Query: 185 PCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEKYLTHVQ 244
YN +++ K + DM +K + VP + +L K
Sbjct: 367 -ITYNALINGFC----KNDMLKEALDMFGSVK--GQGAVPTTRMYNMLIDAYCKLGKIDD 419
Query: 245 KFAKKKRI-RVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFG 303
FA K+ + R P++ +N L+ LC+ +E A+ L+ ++ + T++IL+ G
Sbjct: 420 GFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEG 479
Query: 304 WCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTIS 363
+CR + LL+EM ++G +P + TYN + YCK G + A ++ M +
Sbjct: 480 YCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRL-- 537
Query: 364 SPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYK 423
+Y +++ +Q ++E+ L+ M+ G +P+ TY +I++
Sbjct: 538 RMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY-EIVK------------- 583
Query: 424 FLEEMGNKGYPPDI 437
EEM ++G+ PDI
Sbjct: 584 --EEMVDQGFVPDI 595
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 98/191 (51%), Gaps = 3/191 (1%)
Query: 352 FEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEG 411
FE + G +A + +++ L + +R + + MI P+V T+ +I
Sbjct: 173 FEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINA 232
Query: 412 VCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLC---DNKKSEEALKLYGRMIELRC 468
+C GK+++A +E+M G P++V+YN + C N K +A + M+E
Sbjct: 233 LCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDV 292
Query: 469 IPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACS 528
P++ T+N+LI F++ D+ G+ + ++EM + + +Y +I GL N K EA S
Sbjct: 293 SPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAIS 352
Query: 529 LLEEVINKGIK 539
+ +++++ G++
Sbjct: 353 MRDKMVSAGVQ 363
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 88/209 (42%), Gaps = 3/209 (1%)
Query: 365 PTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYK- 423
P T+ ++I L + +M + +M M GC P+V +Y +I+G C G + YK
Sbjct: 221 PNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKA 280
Query: 424 --FLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISM 481
L+EM P++ T+N + + ++K++ M++ P+V +YN LI+
Sbjct: 281 DAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLING 340
Query: 482 FFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLP 541
A +M G + TY +I G + +EA + V +G
Sbjct: 341 LCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPT 400
Query: 542 YKKFDSFLIQLSDLGDLHAIHKLSDHMRK 570
+ ++ + LG + L + M +
Sbjct: 401 TRMYNMLIDAYCKLGKIDDGFALKEEMER 429
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 159/320 (49%), Gaps = 4/320 (1%)
Query: 256 TQPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGM 314
+ ++ ++ ++D+LC+ ++ A L+K+M K I ++ TYN LV G C+ G
Sbjct: 224 VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGA 283
Query: 315 KLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMI 374
LL++M+ P+ T+N LD + K G + EA +L++ M T+G SP TY ++
Sbjct: 284 LLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI---SPNIITYNTLM 340
Query: 375 VTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYP 434
+R+ E ++ M+ + C PD+ T+ +I+G C+ ++D+ K + +G
Sbjct: 341 DGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLV 400
Query: 435 PDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFET 494
+ VTY+ ++ C + K + A +L+ M+ +P V TY +L+ + + A E
Sbjct: 401 ANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEI 460
Query: 495 WQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSD 554
+++++K +L Y +IEG+ K E+A +L + KG+K + + L
Sbjct: 461 FEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK 520
Query: 555 LGDLHAIHKLSDHMRKFYNP 574
G L + L M + N
Sbjct: 521 KGSLSEANILLRKMEEDGNA 540
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 157/329 (47%), Gaps = 18/329 (5%)
Query: 250 KRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAE--------TYNILV 301
K +++ +P+ FN L+ L + EG + +++ E TYN +V
Sbjct: 148 KVMKLGYEPDTTTFNTLIKGL-------FLEGKVSEAVVLVDRMVENGCQPDVVTYNSIV 200
Query: 302 FGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGST 361
G CR + + LL +M + + D FTY+T +D+ C+ G I A+ LF+ M TKG
Sbjct: 201 NGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKG-- 258
Query: 362 ISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEA 421
I S TY ++ L + + + L+ M+S +P+V T+ +++ GK+ EA
Sbjct: 259 IKSSVV-TYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317
Query: 422 YKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISM 481
+ +EM +G P+I+TYN + C + EA + M+ +C P + T+ LI
Sbjct: 318 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377
Query: 482 FFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLP 541
+ + D + ++ + KRG + TY ++++G K + A L +E+++ G+
Sbjct: 378 YCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPD 437
Query: 542 YKKFDSFLIQLSDLGDLHAIHKLSDHMRK 570
+ L L D G L ++ + ++K
Sbjct: 438 VMTYGILLDGLCDNGKLEKALEIFEDLQK 466
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 127/275 (46%), Gaps = 4/275 (1%)
Query: 249 KKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRV 307
K+ I P I +N L+D C + A + M R + + T+ L+ G+C V
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381
Query: 308 RSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTA 367
+ GMK+ + + G + TY+ + +C++G I A +LF+ M + G P
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL---PDV 438
Query: 368 KTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEE 427
TY I++ L N ++E+ ++ + S + Y IIEG+C GK+++A+
Sbjct: 439 MTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCS 498
Query: 428 MGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDD 487
+ KG P+++TY + LC EA L +M E P+ TYN LI D
Sbjct: 499 LPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGD 558
Query: 488 PDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNK 522
+ + +EM+ G + D + ++I+ L + K
Sbjct: 559 LTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMK 593
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 65/129 (50%), Gaps = 1/129 (0%)
Query: 260 INAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMKLLE 318
I + +++ +CK VE A L+ + K + N TY +++ G C+ S + LL
Sbjct: 473 IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 532
Query: 319 EMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLA 378
+M + G+ P++ TYNT + + + G +T + L E M++ G + + + K M+++
Sbjct: 533 KMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAM 592
Query: 379 QNDRMEECF 387
+ + C
Sbjct: 593 KRLTLRYCL 601
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 112/447 (25%), Positives = 190/447 (42%), Gaps = 40/447 (8%)
Query: 157 VLHRLRYDE--KIAFRFFTWAGNQENYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDY 214
V+ RLR + +A FF N + H P + M+ L+ Q V +L
Sbjct: 46 VVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDG----QVDSVQYLLQQ 101
Query: 215 MKRKNKSTVPVEVLMTILRKYTEKYLTH--VQKFAKKKRIRVKTQPEINAFNLLLDALCK 272
MK + ++ ++++ Y + L V+ F + K P + +N +LD L
Sbjct: 102 MKLQGFHCSE-DLFISVISVYRQVGLAERAVEMFYRIKEF--GCDPSVKIYNHVLDTLLG 158
Query: 273 CCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFT 331
++ +Y+ M R N TYN+L+ C+ KLL EM G PD +
Sbjct: 159 ENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVS 218
Query: 332 YNTALDTYCKAGMITEAVDL---------------------------FEFMRTKGSTISS 364
Y T + + C+ G++ E +L FE MR S
Sbjct: 219 YTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGIS 278
Query: 365 PTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKF 424
P +Y+ +I L + ++E F + M+ GC P++ T +++G L G +A
Sbjct: 279 PNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDL 338
Query: 425 LEEMGNK-GYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFF 483
+M G P++V YN ++ C + +A+ ++ M E+ C P+++TY LI+ F
Sbjct: 339 WNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFA 398
Query: 484 EMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYK 543
+ DGA W +M GC + Y M+E L +K +EA SL+E + +
Sbjct: 399 KRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVP 458
Query: 544 KFDSFLIQLSDLGDLHAIHKLSDHMRK 570
F++F+ L D G L K+ M +
Sbjct: 459 TFNAFIKGLCDAGRLDWAEKVFRQMEQ 485
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 141/326 (43%), Gaps = 38/326 (11%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLL 317
P+ ++ ++ ++C+ LV+ L ++ +++ YN L+ G C+ +L+
Sbjct: 214 PDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSV----YNALINGLCKEHDYKGAFELM 269
Query: 318 EEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGS-----TISS-------- 364
EM++ G P+ +Y+T ++ C +G I A M +G T+SS
Sbjct: 270 REMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLR 329
Query: 365 --------------------PTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTT 404
P Y ++ + + + + +M GC P++ T
Sbjct: 330 GTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRT 389
Query: 405 YKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMI 464
Y +I G G +D A +M G P++V Y + LC + K +EA L M
Sbjct: 390 YGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMS 449
Query: 465 ELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRG-CNLDTDTYCVMIEGLFNCNKT 523
+ C PSV T+N I + D A + +++ME++ C + TY +++GL N+
Sbjct: 450 KENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRI 509
Query: 524 EEACSLLEEVINKGIKLPYKKFDSFL 549
EEA L E+ +G++ +++ L
Sbjct: 510 EEAYGLTREIFMRGVEWSSSTYNTLL 535
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 134/309 (43%), Gaps = 6/309 (1%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMK 315
QP + A+N L+ C + A ++ M +I + N TY L+ G+ + S +
Sbjct: 349 QPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVY 408
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
+ +M+ G P+ Y ++ C+ EA L E M + S PT + +
Sbjct: 409 IWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLC 468
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
+ D E+ F+ M C P++ TY ++++G+ +I+EAY E+ +G
Sbjct: 469 DAGRLDWAEKVFRQMEQ--QHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEW 526
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
TYN L C+ AL+L G+M+ P T NM+I + + + A +
Sbjct: 527 SSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML 586
Query: 496 QEME--KRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLS 553
+ +R D +Y +I GL N E+ LLE +I+ GI +P S LI
Sbjct: 587 DLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGI-VPSIATWSVLINCF 645
Query: 554 DLGDLHAIH 562
L D+ H
Sbjct: 646 ILDDIVRAH 654
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 2/171 (1%)
Query: 240 LTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYN 298
L +K ++ + + P I +N LLD L K +E A GL +++ + + ++ TYN
Sbjct: 473 LDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYN 532
Query: 299 ILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTK 358
L+ G C P ++L+ +M+ G PD T N + YCK G A + + +
Sbjct: 533 TLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSC- 591
Query: 359 GSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDII 409
G P +Y +I L +++ E+ L+ MIS+G +P + T+ +I
Sbjct: 592 GRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLI 642
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 153/305 (50%), Gaps = 4/305 (1%)
Query: 255 KTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRG 313
K + + +++++D LCK ++ A L+ +M K + Y L+ G+C G
Sbjct: 242 KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDG 301
Query: 314 MKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIM 373
KLL +MI+ PD ++ +D + K G + EA +L + M +G SP TY +
Sbjct: 302 AKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI---SPDTVTYTSL 358
Query: 374 IVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGY 433
I + +++++ ++ M+S GC P++ T+ +I G C ID+ + +M +G
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418
Query: 434 PPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFE 493
D VTYN ++ C+ K E A +L+ M+ R P + +Y +L+ + +P+ A E
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALE 478
Query: 494 TWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLS 553
++++EK LD Y ++I G+ N +K ++A L + KG+K K ++ + L
Sbjct: 479 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLC 538
Query: 554 DLGDL 558
G L
Sbjct: 539 KKGSL 543
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 137/279 (49%), Gaps = 10/279 (3%)
Query: 263 FNLLLDALCKCCLVEYAEGLYKKMRKIINTNAE----TYNILVFGWCRVRSPTRGMKLLE 318
+++++ C+C + A + M KII E T++ L+ G C + ++L++
Sbjct: 110 LSIMINCCCRCRKLSLA---FSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVD 166
Query: 319 EMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLA 378
M+++GH+P T N ++ C G +++AV L + M G P TY ++ +
Sbjct: 167 RMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGF---QPNEVTYGPVLKVMC 223
Query: 379 QNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIV 438
++ + +L+ M D Y II+G+C G +D A+ EM KG+ DI+
Sbjct: 224 KSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADII 283
Query: 439 TYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEM 498
Y +R C + ++ KL MI+ + P V ++ LI F + A E +EM
Sbjct: 284 IYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEM 343
Query: 499 EKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKG 537
+RG + DT TY +I+G N+ ++A +L+ +++KG
Sbjct: 344 IQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 143/323 (44%), Gaps = 4/323 (1%)
Query: 247 AKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINT-NAETYNILVFGWC 305
A K I++ +P+ F+ L++ LC V A L +M ++ + T N LV G C
Sbjct: 129 AMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLC 188
Query: 306 RVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSP 365
+ + L++ M++ G +P+ TY L CK+G A++L M + +
Sbjct: 189 LNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLD-- 246
Query: 366 TAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFL 425
A Y+I+I L ++ ++ F L M G D+ Y +I G C G+ D+ K L
Sbjct: 247 -AVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLL 305
Query: 426 EEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEM 485
+M + PD+V ++ + K EA +L+ MI+ P TY LI F +
Sbjct: 306 RDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKE 365
Query: 486 DDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKF 545
+ D A M +GC + T+ ++I G N ++ L ++ +G+ +
Sbjct: 366 NQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTY 425
Query: 546 DSFLIQLSDLGDLHAIHKLSDHM 568
++ + +LG L +L M
Sbjct: 426 NTLIQGFCELGKLEVAKELFQEM 448
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 150/304 (49%), Gaps = 4/304 (1%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSP 310
I+ K P++ AF+ L+D K + AE L+K+M ++ I+ + TY L+ G+C+
Sbjct: 309 IKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQL 368
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
+ +L+ M+ G P+ T+N ++ YCKA +I + ++LF M +G + T Y
Sbjct: 369 DKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVT---Y 425
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGN 430
+I + ++E +L M+S PD+ +YK +++G+C G+ ++A + E++
Sbjct: 426 NTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEK 485
Query: 431 KGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDG 490
DI YN + +C+ K ++A L+ + P V+TYN++I +
Sbjct: 486 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSE 545
Query: 491 AFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLI 550
A +++ME+ G + + TY ++I ++ L+EE+ G + +
Sbjct: 546 ADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVD 605
Query: 551 QLSD 554
LSD
Sbjct: 606 MLSD 609
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 128/270 (47%), Gaps = 4/270 (1%)
Query: 249 KKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRV 307
K+ I+ P+ + L+D CK ++ A + M K N T+NIL+ G+C+
Sbjct: 341 KEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKA 400
Query: 308 RSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTA 367
G++L +M G D TYNT + +C+ G + A +LF+ M ++ P
Sbjct: 401 NLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV---RPDI 457
Query: 368 KTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEE 427
+Y I++ L N E+ ++ + S D+ Y II G+C K+D+A+
Sbjct: 458 VSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCS 517
Query: 428 MGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDD 487
+ KG PD+ TYN + LC EA L+ +M E P+ TYN+LI D
Sbjct: 518 LPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGD 577
Query: 488 PDGAFETWQEMEKRGCNLDTDTYCVMIEGL 517
+ + +E+++ G ++D T ++++ L
Sbjct: 578 ATKSAKLIEEIKRCGFSVDASTVKMVVDML 607
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 105/224 (46%), Gaps = 3/224 (1%)
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
L +EM + RP ++ + +DL + M KG + T +IMI
Sbjct: 59 LFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGI---AHNLYTLSIMIN 115
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
+ ++ F MG +I G PD T+ +I G+CL G++ EA + ++ M G+ P
Sbjct: 116 CCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
++T N + LC N K +A+ L RM+E P+ TY ++ + + A E
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELL 235
Query: 496 QEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
++ME+R LD Y ++I+GL + A +L E+ KG K
Sbjct: 236 RKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFK 279
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 91/227 (40%), Gaps = 33/227 (14%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMKL 316
P I FN+L++ CK L++ L++KM + + + TYN L+ G+C + +L
Sbjct: 385 PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTIS------------- 363
+EM+ RPD +Y LD C G +A+++FE + +
Sbjct: 445 FQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 504
Query: 364 -------------------SPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTT 404
P KTY IMI L + + E L M G P+ T
Sbjct: 505 ASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCT 564
Query: 405 YKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNK 451
Y +I G ++ K +EE+ G+ D T + +L D +
Sbjct: 565 YNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGR 611
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 139/292 (47%), Gaps = 5/292 (1%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRK--IINTNAETYNILVFGWCRVRS 309
+R +P + L+D LCK E A L+ K+ + N TY ++ G+C+
Sbjct: 314 VRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDK 373
Query: 310 PTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKT 369
R L M + G P+ TY T ++ +CKAG A +L M +G P T
Sbjct: 374 LNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFM---PNIYT 430
Query: 370 YAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMG 429
Y I +L + R E ++L+ S G D TY +I+ C I++A F M
Sbjct: 431 YNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMN 490
Query: 430 NKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPD 489
G+ D+ N + C KK +E+ +L+ ++ L IP+ +TY +IS + + D D
Sbjct: 491 KTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDID 550
Query: 490 GAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLP 541
A + + M++ GC D+ TY +I GL + +EAC L E +I++G+ P
Sbjct: 551 LALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPP 602
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 142/314 (45%), Gaps = 3/314 (0%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKL 316
P+ L+L ALC+ LV A ++KM + N + L+ G C+ S + ++
Sbjct: 250 PDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEM 309
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
LEEM++ G +P+ +T+ +D CK G +A LF ++ S P TY MI
Sbjct: 310 LEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLF--LKLVRSDTYKPNVHTYTSMIGG 367
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
+ D++ L M G P+V TY +I G C G AY+ + MG++G+ P+
Sbjct: 368 YCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPN 427
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQ 496
I TYN + LC ++ EA +L + TY +LI + +D + A +
Sbjct: 428 IYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFC 487
Query: 497 EMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLG 556
M K G D ++I K +E+ L + V++ G+ + + S + G
Sbjct: 488 RMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEG 547
Query: 557 DLHAIHKLSDHMRK 570
D+ K +M++
Sbjct: 548 DIDLALKYFHNMKR 561
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 133/284 (46%), Gaps = 5/284 (1%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMKL 316
P N +L+ + L+EYAE ++ +M + + ++ +Y ++V G R +
Sbjct: 180 PSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRW 239
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
L MIQ G PDN T L C+ G++ A+ F M G P + +I
Sbjct: 240 LTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLG---FKPNLINFTSLIDG 296
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYK-FLEEMGNKGYPP 435
L + +++ F+++ M+ +G P+V T+ +I+G+C G ++A++ FL+ + + Y P
Sbjct: 297 LCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKP 356
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
++ TY + C K A L+ RM E P+V TY LI+ + A+E
Sbjct: 357 NVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELM 416
Query: 496 QEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
M G + TY I+ L ++ EA LL + + G++
Sbjct: 417 NLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLE 460
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 147/371 (39%), Gaps = 40/371 (10%)
Query: 233 RKYTEKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIIN 291
R +TEK K + + P ++ + ++ CK + AE L+ +M+ + +
Sbjct: 335 RGWTEKAFRLFLKLVRSDTYK----PNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLF 390
Query: 292 TNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDL 351
N TY L+ G C+ S R +L+ M G P+ +TYN A+D+ CK EA +L
Sbjct: 391 PNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYEL 450
Query: 352 FEFM------------------RTKGSTISSPTA--------------KTYAIMIVTLAQ 379
+ K + I+ A + I+I +
Sbjct: 451 LNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCR 510
Query: 380 NDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVT 439
+M+E +L ++S G +P TY +I C G ID A K+ M G PD T
Sbjct: 511 QKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFT 570
Query: 440 YNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEME 499
Y + LC +EA KLY MI+ P T L + + +D A + ++
Sbjct: 571 YGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLD 630
Query: 500 KRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLH 559
K+ L T ++ L + K A ++++ K +F S+ G +
Sbjct: 631 KK---LWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESGKNN 687
Query: 560 AIHKLSDHMRK 570
+ L++ + +
Sbjct: 688 LVTDLTERISR 698
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 94/199 (47%), Gaps = 3/199 (1%)
Query: 336 LDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMIS 395
L + + G + EAV + M+ +G T SS T + V L + E F M
Sbjct: 154 LRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSV--- 210
Query: 396 SGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEE 455
G +PD ++YK ++ G GKI EA ++L M +G+ PD T L LC+N
Sbjct: 211 RGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNR 270
Query: 456 ALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIE 515
A+ + +MI+L P++ + LI + AFE +EM + G + T+ +I+
Sbjct: 271 AIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALID 330
Query: 516 GLFNCNKTEEACSLLEEVI 534
GL TE+A L +++
Sbjct: 331 GLCKRGWTEKAFRLFLKLV 349
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 149/315 (47%), Gaps = 4/315 (1%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMK 315
QP FN L+ L A L +M K + TY ++V G C+
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 242
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
LL +M Q P YNT +D CK + +A++LF+ M TKG P TY+ +I
Sbjct: 243 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI---RPNVVTYSSLIS 299
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
L R + +L+ MI PDV T+ +I+ GK+ EA K +EM + P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
IVTY+ + C + + +EA +++ M+ C P V TYN LI F + + E +
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419
Query: 496 QEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDL 555
+EM +RG +T TY ++I+GLF + A + +E+++ G+ +++ L L
Sbjct: 420 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479
Query: 556 GDLHAIHKLSDHMRK 570
G L + +++++
Sbjct: 480 GKLEKAMVVFEYLQR 494
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 162/353 (45%), Gaps = 43/353 (12%)
Query: 255 KTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRG 313
K +P + +N ++D LCK ++ A L+K+M K I N TY+ L+ C +
Sbjct: 251 KLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDA 310
Query: 314 MKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIM 373
+LL +MI+ PD FT++ +D + K G + EA L++ M + P+ TY+ +
Sbjct: 311 SRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI---DPSIVTYSSL 367
Query: 374 IVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVC-------------------- 413
I +DR++E ++ +M+S C PDV TY +I+G C
Sbjct: 368 INGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 427
Query: 414 ---------------LCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALK 458
G D A + +EM + G PP+I+TYN L LC N K E+A+
Sbjct: 428 VGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMV 487
Query: 459 LYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLF 518
++ + + P++ TYN++I + + ++ + + +G D Y MI G
Sbjct: 488 VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFC 547
Query: 519 NCNKTEEACSLLEEVINKGIKLPYKKFDSFLI--QLSDLGDLHAIHKLSDHMR 569
EEA +L +E+ G LP + LI +L D GD A +L MR
Sbjct: 548 RKGSKEEADALFKEMKEDGT-LPNSGCYNTLIRARLRD-GDREASAELIKEMR 598
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 152/322 (47%), Gaps = 11/322 (3%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSP 310
++ + P I F+ LL A+ K + L ++M+ + I N TY+IL+ +CR
Sbjct: 73 VKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQL 132
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
+ +L +M++LG+ P+ T ++ L+ YC + I+EAV L + M G P T+
Sbjct: 133 PLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG---YQPNTVTF 189
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGN 430
+I L +++ E L+ M++ GC PD+ TY ++ G+C G D A+ L +M
Sbjct: 190 NTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQ 249
Query: 431 KGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDG 490
P ++ YN + LC K ++AL L+ M P+V TY+ LIS
Sbjct: 250 GKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSD 309
Query: 491 AFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLI 550
A +M +R N D T+ +I+ K EA L +E++ + I D ++
Sbjct: 310 ASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI-------DPSIV 362
Query: 551 QLSDLGDLHAIHKLSDHMRKFY 572
S L + +H D ++ +
Sbjct: 363 TYSSLINGFCMHDRLDEAKQMF 384
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 136/286 (47%), Gaps = 10/286 (3%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSP 310
I K P++ F+ L+DA K + AE LY +M ++ I+ + TY+ L+ G+C
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
++ E M+ PD TYNT + +CK + E +++F M +G ++ T Y
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT---Y 434
Query: 371 AIMIVTLAQN---DRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEE 427
I+I L Q D +E FK M+S G P++ TY +++G+C GK+++A E
Sbjct: 435 NILIQGLFQAGDCDMAQEIFK---EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 491
Query: 428 MGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDD 487
+ P I TYN + +C K E+ L+ + P V YN +IS F
Sbjct: 492 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGS 551
Query: 488 PDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEV 533
+ A ++EM++ G ++ Y +I E + L++E+
Sbjct: 552 KEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 140/308 (45%), Gaps = 11/308 (3%)
Query: 206 RIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEKYLTHVQKFAKKKRIRVKTQPEINAFNL 265
R++ DM++ ++ N L+ K E L +K + ++ P I ++
Sbjct: 312 RLLSDMIE--RKINPDVFTFSALIDAFVK--EGKLVEAEKLYDE-MVKRSIDPSIVTYSS 366
Query: 266 LLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLG 324
L++ C ++ A+ +++ M K + TYN L+ G+C+ + GM++ EM Q G
Sbjct: 367 LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG 426
Query: 325 HRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRME 384
+ TYN + +AG A ++F+ M + G P TY ++ L +N ++E
Sbjct: 427 LVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV---PPNIMTYNTLLDGLCKNGKLE 483
Query: 385 ECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFL 444
+ + Y+ S P + TY +IEG+C GK+++ + + KG PD+V YN +
Sbjct: 484 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMI 543
Query: 445 RVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCN 504
C EEA L+ M E +P+ YN LI D + + E +EM R C
Sbjct: 544 SGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM--RSCG 601
Query: 505 LDTDTYCV 512
D +
Sbjct: 602 FAGDASTI 609
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 109/229 (47%), Gaps = 6/229 (2%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKL 316
P++ +N L+ CK VE ++++M ++ + N TYNIL+ G + ++
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 453
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFM-RTKGSTISSPTAKTYAIMIV 375
+EM+ G P+ TYNT LD CK G + +A+ +FE++ R+K PT TY IMI
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK----MEPTIYTYNIMIE 509
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
+ + ++E+ + L + G PDV Y +I G C G +EA +EM G P
Sbjct: 510 GMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 569
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFE 484
+ YN +R + E + +L M T ++ +M +
Sbjct: 570 NSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHD 618
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 118/263 (44%), Gaps = 4/263 (1%)
Query: 313 GMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAI 372
+ L EM++ P ++ L K + L E M+ G TY+I
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGI---PHNHYTYSI 121
Query: 373 MIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKG 432
+I + ++ ++G M+ G P++ T ++ G C +I EA +++M G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 433 YPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAF 492
Y P+ VT+N + L + K+ EA+ L RM+ C P + TY ++++ + D D AF
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 493 ETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQL 552
+ME+ Y +I+GL ++A +L +E+ KGI+ + S + L
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 553 SDLGDLH-AIHKLSDHMRKFYNP 574
+ G A LSD + + NP
Sbjct: 302 CNYGRWSDASRLLSDMIERKINP 324
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 83/189 (43%)
Query: 382 RMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYN 441
++++ L G M+ S P + + ++ + K D E+M N G P + TY+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 442 CFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKR 501
+ C + AL + G+M++L P++ T + L++ + A +M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 502 GCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAI 561
G +T T+ +I GLF NK EA +L++ ++ KG + + + L GD
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 562 HKLSDHMRK 570
L + M +
Sbjct: 241 FNLLNKMEQ 249
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 113/450 (25%), Positives = 196/450 (43%), Gaps = 48/450 (10%)
Query: 137 NLEKALDQLAIPLSTPLVTGVLHRLRYDEKIAFRFFTWAGNQENYSHEPCAYNDMMDILS 196
+ EKAL+ L + + LV +L + + + +FF WAG + N+ H+ Y ++ L
Sbjct: 79 DAEKALEVLKLKVDHRLVRSILE-IDVEINVKIQFFKWAGKRRNFQHDCSTYMTLIRCLE 137
Query: 197 STKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEKYLTHVQKFAKKKRIRVKT 256
R Y E Y T +Q+ + + V
Sbjct: 138 EA----------------------------------RLYGEMYRT-IQEVVRNTYVSV-- 160
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLY--KKMRKIINTNAETYNILVFGWCRVRSPTRGM 314
P + + L+ AL + +V A ++ K RK T++ TYN ++ + +
Sbjct: 161 SPAV--LSELVKALGRAKMVSKALSVFYQAKGRKCKPTSS-TYNSVILMLMQEGQHEKVH 217
Query: 315 KLLEEMIQLGH-RPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIM 373
++ EM G PD TY+ + +Y K G A+ LF+ M+ PT K Y +
Sbjct: 218 EVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMK---DNCMQPTEKIYTTL 274
Query: 374 IVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGY 433
+ + ++E+ L M +GC P V TY ++I+G+ G++DEAY F ++M G
Sbjct: 275 LGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGL 334
Query: 434 PPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFE 493
PD+V N + +L + EE ++ M RC P+V +YN +I FE
Sbjct: 335 TPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVS 394
Query: 494 TW-QEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQL 552
+W +M+ + TY ++I+G N+ E+A LLEE+ KG + S + L
Sbjct: 395 SWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINAL 454
Query: 553 SDLGDLHAIHKLSDHMRKFYNPAMARRYAI 582
A ++L +++ + +R YA+
Sbjct: 455 GKAKRYEAANELFKELKENFGNVSSRVYAV 484
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 123/273 (45%), Gaps = 5/273 (1%)
Query: 258 PEINAFNLLLDAL--CKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMK 315
P + ++N ++ AL K + E + K ++ + TY+IL+ G+C+ + +
Sbjct: 371 PTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALL 430
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
LLEEM + G P Y + ++ KA A +LF+ ++ +SS + YA+MI
Sbjct: 431 LLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSS---RVYAVMIK 487
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
+ ++ E L M + G PDV Y ++ G+ G I+EA L +M G
Sbjct: 488 HFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRA 547
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
DI ++N L A++++ + P TYN L+ F + A
Sbjct: 548 DINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMM 607
Query: 496 QEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACS 528
+EM+ +G D TY +++ + N + ++ S
Sbjct: 608 REMKDKGFEYDAITYSSILDAVGNVDHEKDDVS 640
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 148/359 (41%), Gaps = 8/359 (2%)
Query: 200 YKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEKYLTHVQKFA-KKKRIRVKTQP 258
+KV + D+ + MKR S P T L K K + + K +R P
Sbjct: 279 FKVGKVEKALDLFEEMKRAGCS--PTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTP 336
Query: 259 EINAFNLLLDALCKCCLVEYAEGLYKKMRKIINT-NAETYNILVFGWCRVRSPTRGMK-L 316
++ N L++ L K VE ++ +M T +YN ++ ++ +
Sbjct: 337 DVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSW 396
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
++M P FTY+ +D YCK + +A+ L E M KG P Y +I
Sbjct: 397 FDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGF---PPCPAAYCSLINA 453
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
L + R E +L + + Y +I+ CGK+ EA EM N+G PD
Sbjct: 454 LGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPD 513
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQ 496
+ YN + + EA L +M E C + ++N++++ F P A E ++
Sbjct: 514 VYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFE 573
Query: 497 EMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDL 555
++ G D TY ++ + EEA ++ E+ +KG + + S L + ++
Sbjct: 574 TIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNV 632
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 121/283 (42%), Gaps = 5/283 (1%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMK 315
QP + LL K VE A L+++M++ + TY L+ G +
Sbjct: 265 QPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYG 324
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
++M++ G PD N ++ K G + E ++F M G +PT +Y +I
Sbjct: 325 FYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEM---GMWRCTPTVVSYNTVIK 381
Query: 376 TLAQND-RMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYP 434
L ++ + E M + P TY +I+G C ++++A LEEM KG+P
Sbjct: 382 ALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFP 441
Query: 435 PDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFET 494
P Y + L K+ E A +L+ + E S + Y ++I F + A +
Sbjct: 442 PCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDL 501
Query: 495 WQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKG 537
+ EM+ +G D Y ++ G+ EA SLL ++ G
Sbjct: 502 FNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENG 544
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 154/321 (47%), Gaps = 39/321 (12%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSP 310
++ + P I F+ LL A+ K + L ++M+ + I+ N TY+IL+ +CR
Sbjct: 73 VKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQL 132
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
+ + +L +M++LG+ PD T N+ L+ +C I++AV L M G P + T+
Sbjct: 133 SLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG---YQPDSFTF 189
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLE---- 426
+I L +++R E L+ M+ GC PD+ TY ++ G+C G ID A L+
Sbjct: 190 NTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQ 249
Query: 427 -------------------------------EMGNKGYPPDIVTYNCFLRVLCDNKKSEE 455
EM NKG P++VTYN +R LC+ + +
Sbjct: 250 GKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD 309
Query: 456 ALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIE 515
A +L MIE + P+V T++ LI F + A + + EM KR + D TY +I
Sbjct: 310 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 369
Query: 516 GLFNCNKTEEACSLLEEVINK 536
G ++ +EA + E +I+K
Sbjct: 370 GFCMHDRLDEAKHMFELMISK 390
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 141/290 (48%), Gaps = 5/290 (1%)
Query: 244 QKFAKKKRIRVKT-QPEINAFNLLLDALCKCCLVEYAEGLYKKMRK-IINTNAETYNILV 301
+ A R+ VK QP++ + ++++ LCK ++ A L KKM + I YN ++
Sbjct: 204 EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTII 263
Query: 302 FGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGST 361
C ++ + L EM G RP+ TYN+ + C G ++A L M +
Sbjct: 264 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI- 322
Query: 362 ISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEA 421
+P T++ +I + ++ E KL MI PD+ TY +I G C+ ++DEA
Sbjct: 323 --NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 380
Query: 422 YKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISM 481
E M +K P++VTYN ++ C K+ +E ++L+ M + + + TY LI
Sbjct: 381 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHG 440
Query: 482 FFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLE 531
FF+ + D A +++M G D TY ++++GL N K E A + E
Sbjct: 441 FFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFE 490
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 136/286 (47%), Gaps = 5/286 (1%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMK 315
QP+ FN L+ L + A L +M K + TY I+V G C+ +
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
LL++M Q P YNT +D C + +A++LF M KG P TY +I
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGI---RPNVVTYNSLIR 299
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
L R + +L+ MI P+V T+ +I+ GK+ EA K +EM + P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 359
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
DI TY+ + C + + +EA ++ MI C P+V TYN LI F + D E +
Sbjct: 360 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELF 419
Query: 496 QEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLP 541
+EM +RG +T TY +I G F + + A + +++++ G+ LP
Sbjct: 420 REMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGV-LP 464
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 140/292 (47%), Gaps = 4/292 (1%)
Query: 249 KKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRV 307
KK + K +P + +N ++DALC V A L+ +M K I N TYN L+ C
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 304
Query: 308 RSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTA 367
+ +LL +MI+ P+ T++ +D + K G + EA L++ M + P
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI---DPDI 361
Query: 368 KTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEE 427
TY+ +I +DR++E + MIS C P+V TY +I+G C ++DE + E
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421
Query: 428 MGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDD 487
M +G + VTY + ++ + A ++ +M+ +P + TY++L+
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK 481
Query: 488 PDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
+ A ++ +++ D TY +MIEG+ K E+ L + KG+K
Sbjct: 482 VETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 533
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 153/346 (44%), Gaps = 12/346 (3%)
Query: 168 AFRFFTWAGNQENYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEV 227
A FT N+ YN ++ L + R++ DM++ ++ N + V
Sbjct: 275 ALNLFTEMDNK-GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE--RKINPNVVTFSA 331
Query: 228 LMTILRKYTEKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM- 286
L+ K E L +K + I+ P+I ++ L++ C ++ A+ +++ M
Sbjct: 332 LIDAFVK--EGKLVEAEKLYDEM-IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 388
Query: 287 RKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMIT 346
K N TYN L+ G+C+ + GM+L EM Q G + TY T + + +A
Sbjct: 389 SKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECD 448
Query: 347 EAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYK 406
A +F+ M + G P TY+I++ L N ++E + Y+ S PD+ TY
Sbjct: 449 NAQIVFKQMVSDGVL---PDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYN 505
Query: 407 DIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIEL 466
+IEG+C GK+++ + + KG P++VTY + C EEA L+ M E
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEE 565
Query: 467 RCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCV 512
+P TYN LI D + E +EM R C D +
Sbjct: 566 GPLPDSGTYNTLIRAHLRDGDKAASAELIREM--RSCRFVGDASTI 609
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 131/283 (46%), Gaps = 4/283 (1%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSP 310
I K P + F+ L+DA K + AE LY +M ++ I+ + TY+ L+ G+C
Sbjct: 318 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 377
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
+ E MI P+ TYNT + +CKA + E ++LF M +G ++ T T
Sbjct: 378 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGN 430
+ D + FK M+S G LPD+ TY +++G+C GK++ A E +
Sbjct: 438 IHGFFQARECDNAQIVFK---QMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQR 494
Query: 431 KGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDG 490
PDI TYN + +C K E+ L+ + P+V TY ++S F +
Sbjct: 495 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEE 554
Query: 491 AFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEV 533
A ++EM++ G D+ TY +I + L+ E+
Sbjct: 555 ADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 109/230 (47%), Gaps = 8/230 (3%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKL 316
P + +N L+ CK V+ L+++M ++ + N TY L+ G+ + R +
Sbjct: 394 PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIV 453
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFM-RTKGSTISSPTAKTYAIMIV 375
++M+ G PD TY+ LD C G + A+ +FE++ R+K P TY IMI
Sbjct: 454 FKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSK----MEPDIYTYNIMIE 509
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
+ + ++E+ + L + G P+V TY ++ G C G +EA EM +G P
Sbjct: 510 GMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLP 569
Query: 436 DIVTYNCFLRV-LCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFE 484
D TYN +R L D K+ A +L M R + T ++ +M +
Sbjct: 570 DSGTYNTLIRAHLRDGDKAASA-ELIREMRSCRFVGDASTIGLVTNMLHD 618
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 116/263 (44%), Gaps = 4/263 (1%)
Query: 313 GMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAI 372
+ L +M++ P ++ L K + L E M+ G S TY+I
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGI---SHNLYTYSI 121
Query: 373 MIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKG 432
+I + ++ ++ M+ G PD+ T ++ G C +I +A + +M G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 433 YPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAF 492
Y PD T+N + L + ++ EA+ L RM+ C P + TY ++++ + D D A
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 493 ETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQL 552
++ME+ Y +I+ L N +A +L E+ NKGI+ ++S + L
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 553 SDLGDLH-AIHKLSDHMRKFYNP 574
+ G A LSD + + NP
Sbjct: 302 CNYGRWSDASRLLSDMIERKINP 324
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 73/156 (46%)
Query: 382 RMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYN 441
++++ L G M+ S P + + ++ + K D E+M N G ++ TY+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 442 CFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKR 501
+ C + AL + +M++L P + T N L++ F + A +M +
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 502 GCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKG 537
G D+ T+ +I GLF N+ EA +L++ ++ KG
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG 216
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 178/380 (46%), Gaps = 17/380 (4%)
Query: 164 DEKIAFRFFTWAGNQENYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTV 223
D + A FF W + + H +N ++DIL K +F I +++ M N +V
Sbjct: 60 DWQKALEFFNWVERESGFRHTTETFNRVIDILG----KYFEFEISWALINRMI-GNTESV 114
Query: 224 PVEVLMTIL-RKYTEKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGL 282
P V I+ ++Y +L A K + E + +NL+ DALC+ V AE L
Sbjct: 115 PNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYNLV-DALCEHKHVVEAEEL 173
Query: 283 YKKMRKIIN----TNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDT 338
I N +N + +N+++ GW ++ + + ++M G D F+Y+ +D
Sbjct: 174 CFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDI 233
Query: 339 YCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGC 398
CK+G +AV L++ M+++ + Y +I + + +E ++ M GC
Sbjct: 234 MCKSGKPWKAVKLYKEMKSRRMKLD---VVAYNTVIRAIGASQGVEFGIRVFREMRERGC 290
Query: 399 LPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALK 458
P+V T+ II+ +C G++ +AY+ L+EM +G PD +TY C L +K E L
Sbjct: 291 EPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRL---EKPSEILS 347
Query: 459 LYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLF 518
L+GRMI P + TY ML+ F W+ M++ G D+ Y +I+ L
Sbjct: 348 LFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALI 407
Query: 519 NCNKTEEACSLLEEVINKGI 538
+ A EE+I +G+
Sbjct: 408 QKGMLDMAREYEEEMIERGL 427
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 129/294 (43%), Gaps = 17/294 (5%)
Query: 263 FNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQ 322
FN ++D L K E + L +M I N + F R T L++E I
Sbjct: 84 FNRVIDILGKYFEFEISWALINRM---IGNTESVPNHVTFRIVFKRYVT--AHLVQEAID 138
Query: 323 LGHRPDNF------TYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
+ D+F ++ +D C+ + EA +L G+ S K + +++
Sbjct: 139 AYDKLDDFNLRDETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRG 198
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
++ +C + M + G D+ +Y ++ +C GK +A K +EM ++ D
Sbjct: 199 WSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLD 258
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQ 496
+V YN +R + ++ E ++++ M E C P+V T+N +I + E A+
Sbjct: 259 VVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLD 318
Query: 497 EMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLI 550
EM KRGC D+ TY + L K E SL +I G++ K D++++
Sbjct: 319 EMPKRGCQPDSITYMCLFSRL---EKPSEILSLFGRMIRSGVR---PKMDTYVM 366
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 89/192 (46%), Gaps = 11/192 (5%)
Query: 245 KFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFG 303
K K +R+++ ++ A+N ++ A+ VE+ ++++MR + N T+N ++
Sbjct: 248 KEMKSRRMKL----DVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKL 303
Query: 304 WCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTIS 363
C ++L+EM + G +PD+ TY + + + +E + LF M G
Sbjct: 304 LCEDGRMRDAYRMLDEMPKRGCQPDSITY---MCLFSRLEKPSEILSLFGRMIRSGV--- 357
Query: 364 SPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYK 423
P TY +++ + ++ + M SG PD Y +I+ + G +D A +
Sbjct: 358 RPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMARE 417
Query: 424 FLEEMGNKGYPP 435
+ EEM +G P
Sbjct: 418 YEEEMIERGLSP 429
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 142/294 (48%), Gaps = 4/294 (1%)
Query: 272 KCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFT 331
KC +E + + + +A TYNIL+ G + +KL +EM++ +P T
Sbjct: 130 KCGELEKMKERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVT 189
Query: 332 YNTALDTYCKAGMITEAVDL-FEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLM 390
+ T + CK + EA+ + + ++ G PT YA +I L Q + FKL
Sbjct: 190 FGTLIHGLCKDSRVKEALKMKHDMLKVYGV---RPTVHIYASLIKALCQIGELSFAFKLK 246
Query: 391 GYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDN 450
D Y +I + G+ +E LEEM KG PD VTYN + C
Sbjct: 247 DEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVE 306
Query: 451 KKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTY 510
SE A ++ M+E P V +YNM++ +FF + + A +++M +RGC+ DT +Y
Sbjct: 307 NDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSY 366
Query: 511 CVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKL 564
++ +GL + EEA +L+E++ KG K + + FL +L + G L + K+
Sbjct: 367 RIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKV 420
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 150/308 (48%), Gaps = 4/308 (1%)
Query: 264 NLLLDALCKCCLVEYAEGLYKKMRKIINT-NAETYNILVFGWCRVRSPTRGMKLLEEMIQ 322
N+LL+ C+C + A KM K+ + + T+ L+ G+CR + + ++M+
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVG 179
Query: 323 LGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDR 382
+G++P+ YNT +D CK+ + A+DL M G P TY +I L + R
Sbjct: 180 MGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGI---GPDVVTYNSLISGLCSSGR 236
Query: 383 MEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNC 442
+ +++ M PDV T+ +I+ G++ EA +F EEM + PDIVTY+
Sbjct: 237 WSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSL 296
Query: 443 FLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRG 502
+ LC + +EA +++G M+ C P V TY++LI+ + + + + + EM +RG
Sbjct: 297 LIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG 356
Query: 503 CNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIH 562
+T TY ++I+G K A + ++ G+ ++ L L D G +
Sbjct: 357 VVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKAL 416
Query: 563 KLSDHMRK 570
+ M+K
Sbjct: 417 VILADMQK 424
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 137/278 (49%), Gaps = 8/278 (2%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMRK-IINTNAETYNILVFGWCRVRSPTRGMK 315
+P + +N ++D LCK V+ A L +M K I + TYN L+ G C + +
Sbjct: 183 KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATR 242
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
++ M + PD FT+N +D K G ++EA + +E M + P TY+++I
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSL---DPDIVTYSLLIY 299
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
L R++E ++ G+M+S GC PDV TY +I G C K++ K EM +G
Sbjct: 300 GLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVR 359
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
+ VTY ++ C K A +++ RM+ P++ TYN+L+ + + A
Sbjct: 360 NTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVIL 419
Query: 496 QEMEKRGCNLDTDTYCVMIEGLFNCNKTEEA----CSL 529
+M+K G + D TY ++I G+ + +A CSL
Sbjct: 420 ADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSL 457
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 138/290 (47%), Gaps = 4/290 (1%)
Query: 250 KRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVR 308
K I++ +P I F LL+ C+ V A ++ +M + N YN ++ G C+ +
Sbjct: 141 KMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSK 200
Query: 309 SPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAK 368
+ LL M + G PD TYN+ + C +G ++A + M + P
Sbjct: 201 QVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIY---PDVF 257
Query: 369 TYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEM 428
T+ +I + R+ E + MI PD+ TY +I G+C+ ++DEA + M
Sbjct: 258 TFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFM 317
Query: 429 GNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDP 488
+KG PD+VTY+ + C +KK E +KL+ M + + + TY +LI +
Sbjct: 318 VSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKL 377
Query: 489 DGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGI 538
+ A E ++ M G + + TY V++ GL + K E+A +L ++ G+
Sbjct: 378 NVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGM 427
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 116/236 (49%), Gaps = 5/236 (2%)
Query: 237 EKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAE 295
E ++ ++F ++ IR P+I ++LL+ LC ++ AE ++ M K +
Sbjct: 269 EGRVSEAEEFYEEM-IRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVV 327
Query: 296 TYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFM 355
TY+IL+ G+C+ + GMKL EM Q G + TY + YC+AG + A ++F M
Sbjct: 328 TYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRM 387
Query: 356 RTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLC 415
G P TY +++ L N ++E+ ++ M +G D+ TY II G+C
Sbjct: 388 VFCGV---HPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKA 444
Query: 416 GKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPS 471
G++ +A+ + +G PDI TY + L EA L+ +M E +P+
Sbjct: 445 GEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 73/162 (45%)
Query: 365 PTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKF 424
P+ ++ ++ +++ + + L M G ++ T ++ C C ++ A F
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 425 LEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFE 484
L +M G+ P IVT+ L C + +AL ++ +M+ + P+V YN +I +
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 485 MDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEA 526
D A + MEK G D TY +I GL + + +A
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 77/189 (40%)
Query: 382 RMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYN 441
++++ L +M+ LP + + ++ + K D E+M G P ++ T N
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 442 CFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKR 501
L C + AL G+MI+L PS+ T+ L++ F D A + +M
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 502 GCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAI 561
G + Y +I+GL + + A LL + GI ++S + L G
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 562 HKLSDHMRK 570
++ M K
Sbjct: 241 TRMVSCMTK 249
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 152/322 (47%), Gaps = 4/322 (1%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSP 310
I +P++ +N L+ LCK + AE KM + + ++ TYN L+ G+C+
Sbjct: 278 IEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMV 337
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
+++ + + G PD FTY + +D C G A+ LF KG P Y
Sbjct: 338 QLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGI---KPNVILY 394
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGN 430
+I L+ + E +L M G +P+V T+ ++ G+C G + +A ++ M +
Sbjct: 395 NTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS 454
Query: 431 KGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDG 490
KGY PDI T+N + K E AL++ M++ P V TYN L++ + +
Sbjct: 455 KGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFED 514
Query: 491 AFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLI 550
ET++ M ++GC + T+ +++E L K +EA LLEE+ NK + F + +
Sbjct: 515 VMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLID 574
Query: 551 QLSDLGDLHAIHKLSDHMRKFY 572
GDL + L M + Y
Sbjct: 575 GFCKNGDLDGAYTLFRKMEEAY 596
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 138/285 (48%), Gaps = 9/285 (3%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKL 316
PE+ FN+L++ LCK V A+GL K M K + T+NIL+ G+ +++
Sbjct: 424 PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEI 483
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
L+ M+ G PD +TYN+ L+ CK + ++ ++ M KG +P T+ I++ +
Sbjct: 484 LDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGC---APNLFTFNILLES 540
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGY--P 434
L + +++E L+ M + PD T+ +I+G C G +D AY +M + Y
Sbjct: 541 LCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM-EEAYKVS 599
Query: 435 PDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCI-PSVQTYNMLISMFFEMDDPDGAFE 493
TYN + + A KL+ M++ RC+ P TY +++ F + + + ++
Sbjct: 600 SSTPTYNIIIHAFTEKLNVTMAEKLFQEMVD-RCLGPDGYTYRLMVDGFCKTGNVNLGYK 658
Query: 494 TWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGI 538
EM + G T +I L ++ EA ++ ++ KG+
Sbjct: 659 FLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGL 703
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 101/216 (46%), Gaps = 3/216 (1%)
Query: 256 TQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGM 314
P++ +N LL+ LCK E YK M K N T+NIL+ CR R +
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEAL 551
Query: 315 KLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMI 374
LLEEM PD T+ T +D +CK G + A LF M + +SS T TY I+I
Sbjct: 552 GLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKME-EAYKVSSSTP-TYNIII 609
Query: 375 VTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYP 434
+ + KL M+ PD TY+ +++G C G ++ YKFL EM G+
Sbjct: 610 HAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFI 669
Query: 435 PDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIP 470
P + T + LC + EA + RM++ +P
Sbjct: 670 PSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVP 705
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 133/319 (41%), Gaps = 5/319 (1%)
Query: 239 YLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETY 297
Y K + R R T P++ +F + + + CK A L M + N Y
Sbjct: 126 YFDQAHKVYMRMRDRGIT-PDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAY 184
Query: 298 NILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRT 357
+V G+ G +L +M+ G T+N L CK G + E L + +
Sbjct: 185 CTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIK 244
Query: 358 KGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGK 417
+G P TY + I L Q ++ +++G +I G PDV TY ++I G+C K
Sbjct: 245 RGVL---PNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSK 301
Query: 418 IDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNM 477
EA +L +M N+G PD TYN + C + A ++ G + +P TY
Sbjct: 302 FQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRS 361
Query: 478 LISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKG 537
LI + + A + E +G + Y +I+GL N EA L E+ KG
Sbjct: 362 LIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKG 421
Query: 538 IKLPYKKFDSFLIQLSDLG 556
+ + F+ + L +G
Sbjct: 422 LIPEVQTFNILVNGLCKMG 440
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 69/155 (44%)
Query: 416 GKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTY 475
GK+ EA E M P + +YN + VL D+ ++A K+Y RM + P V ++
Sbjct: 90 GKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSF 149
Query: 476 NMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVIN 535
+ + F + P A M +GC ++ YC ++ G + N E L +++
Sbjct: 150 TIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLA 209
Query: 536 KGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMRK 570
G+ L F+ L L GD+ KL D + K
Sbjct: 210 SGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIK 244
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 83/187 (44%)
Query: 378 AQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDI 437
+ +++E + M C P V +Y I+ + G D+A+K M ++G PD+
Sbjct: 87 GRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDV 146
Query: 438 VTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQE 497
++ ++ C + AL+L M C +V Y ++ F+E + +E + +
Sbjct: 147 YSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGK 206
Query: 498 MEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGD 557
M G +L T+ ++ L +E LL++VI +G+ ++ F+ L G+
Sbjct: 207 MLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGE 266
Query: 558 LHAIHKL 564
L ++
Sbjct: 267 LDGAVRM 273
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 3/209 (1%)
Query: 331 TYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLM 390
Y A+ Y + G + EAV++FE M PT +Y ++ L + ++ K+
Sbjct: 78 VYVGAMKNYGRKGKVQEAVNVFERMDFYDC---EPTVFSYNAIMSVLVDSGYFDQAHKVY 134
Query: 391 GYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDN 450
M G PDV ++ ++ C + A + L M ++G ++V Y + +
Sbjct: 135 MRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEE 194
Query: 451 KKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTY 510
E +L+G+M+ + T+N L+ + + D + ++ KRG + TY
Sbjct: 195 NFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTY 254
Query: 511 CVMIEGLFNCNKTEEACSLLEEVINKGIK 539
+ I+GL + + A ++ +I +G K
Sbjct: 255 NLFIQGLCQRGELDGAVRMVGCLIEQGPK 283
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 116/439 (26%), Positives = 188/439 (42%), Gaps = 59/439 (13%)
Query: 138 LEKALDQLAIPLSTPLVTGVLHRLRYDEKIAFRFFTWAGNQENYSHEPCAYNDMMDILSS 197
+E AL+ L LS ++T V+ + + ++ FRFF WA ++ ++ ++D+LS
Sbjct: 47 IEPALEPLVPFLSKNIITSVI-KDEVNRQLGFRFFIWA-SRRERLRSRESFGLVIDMLSE 104
Query: 198 TKYKVKQFRIVCDM----LDYMKRKNKSTVPVEVLMTILRKYTEKYLTH--VQKFAKKKR 251
CD+ L+ +K S V ++ Y + + V+ F + K
Sbjct: 105 DNG--------CDLYWQTLEELKSGGVS-VDSYCFCVLISAYAKMGMAEKAVESFGRMKE 155
Query: 252 IRVKTQPEINAFNLLLDAL-------------------CKCCLVEYA-----EGLYKKMR 287
+P++ +N++L + C C Y +GLYKK R
Sbjct: 156 F--DCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGR 213
Query: 288 -------------KIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNT 334
+ I+ N TY IL+ G C+ S KL EM G+ PD+ +N
Sbjct: 214 TSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNA 273
Query: 335 ALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMI 394
LD +CK G + EA +L G + + Y+ +I L + R + F+L M+
Sbjct: 274 LLDGFCKLGRMVEAFELLRLFEKDGFVLG---LRGYSSLIDGLFRARRYTQAFELYANML 330
Query: 395 SSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSE 454
PD+ Y +I+G+ GKI++A K L M +KG PD YN ++ LC E
Sbjct: 331 KKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLE 390
Query: 455 EALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMI 514
E L M E P T+ +LI A E + E+EK GC+ T+ +I
Sbjct: 391 EGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALI 450
Query: 515 EGLFNCNKTEEACSLLEEV 533
+GL + +EA LL ++
Sbjct: 451 DGLCKSGELKEARLLLHKM 469
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/441 (24%), Positives = 185/441 (41%), Gaps = 38/441 (8%)
Query: 151 TPLVTGVLHRLRYDEKIAFRFFTWAGNQENYSHEPCAYNDMMDILSSTKYKVKQFRIV-- 208
T L++G+ R D+ A + F NY + A+N ++D V+ F ++
Sbjct: 237 TILISGLCQRGSADD--ARKLFYEMQTSGNYP-DSVAHNALLDGFCKLGRMVEAFELLRL 293
Query: 209 -------------CDMLDYMKRKNKSTVPVEVLMTILRKYTEK----YLTHVQKFAKKKR 251
++D + R + T E+ +L+K + Y +Q +K +
Sbjct: 294 FEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGK 353
Query: 252 IRVKTQ-----------PEINAFNLLLDALCKCCLVEYAEGLYKKMRKIIN-TNAETYNI 299
I + P+ +N ++ ALC L+E L +M + + +A T+ I
Sbjct: 354 IEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTI 413
Query: 300 LVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRT-K 358
L+ CR ++ E+ + G P T+N +D CK+G + EA L M +
Sbjct: 414 LICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGR 473
Query: 359 GSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKI 418
+++ + + T+ ++ + + ++ + + +G PD+ +Y +I G C G I
Sbjct: 474 PASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDI 533
Query: 419 DEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNML 478
D A K L + KG PD VTYN + L + EEA KL+ + R P+V Y L
Sbjct: 534 DGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAV--YRSL 591
Query: 479 ISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGI 538
++ AF W + K+ LD +T IE F +TE A L E+ +
Sbjct: 592 MTWSCRKRKVLVAFNLWMKYLKKISCLDDET-ANEIEQCFKEGETERALRRLIELDTRKD 650
Query: 539 KLPYKKFDSFLIQLSDLGDLH 559
+L + +LI L G H
Sbjct: 651 ELTLGPYTIWLIGLCQSGRFH 671
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 121/282 (42%), Gaps = 13/282 (4%)
Query: 263 FNLLLDALCK---CCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLEE 319
F L++D L + C L Y + L + ++ ++ + +L+ + ++ + ++
Sbjct: 95 FGLVIDMLSEDNGCDL--YWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGR 152
Query: 320 MIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTIS---SPTAKTYAIMIVT 376
M + RPD FTYN L M+ E V + SP T+ I++
Sbjct: 153 MKEFDCRPDVFTYNVILRV-----MMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDG 207
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
L + R + K+ M G P+ TY +I G+C G D+A K EM G PD
Sbjct: 208 LYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPD 267
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQ 496
V +N L C + EA +L + + ++ Y+ LI F AFE +
Sbjct: 268 SVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYA 327
Query: 497 EMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGI 538
M K+ D Y ++I+GL K E+A LL + +KGI
Sbjct: 328 NMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGI 369
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 118/258 (45%), Gaps = 14/258 (5%)
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
LEE+ G D++ + + Y K GM +AV+ F M+ P TY +++
Sbjct: 115 LEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDC---RPDVFTYNVILRV 171
Query: 377 LAQNDRMEECFKLMGY-----MISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNK 431
+ + EE F ++ + M+ C P++ T+ +++G+ G+ +A K ++M +
Sbjct: 172 MMR----EEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGR 227
Query: 432 GYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGA 491
G P+ VTY + LC +++A KL+ M P +N L+ F ++ A
Sbjct: 228 GISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEA 287
Query: 492 FETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQ 551
FE + EK G L Y +I+GLF + +A L ++ K IK P + LIQ
Sbjct: 288 FELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIK-PDIILYTILIQ 346
Query: 552 -LSDLGDLHAIHKLSDHM 568
LS G + KL M
Sbjct: 347 GLSKAGKIEDALKLLSSM 364
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 111/281 (39%), Gaps = 52/281 (18%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMR---------KIINTNAETYNILVFGWCRVR 308
P + FN L+D LCK ++ A L KM ++ ++ +++ +V
Sbjct: 441 PSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMV----ESG 496
Query: 309 SPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAK 368
S + + L G PD +YN ++ +C+AG I A+ L ++ KG SP +
Sbjct: 497 SILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGL---SPDSV 553
Query: 369 TYAIMIVTLAQNDRMEECFKL----------------------------------MGYMI 394
TY +I L + R EE FKL M Y+
Sbjct: 554 TYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMKYLK 613
Query: 395 SSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSE 454
CL D T + IE G+ + A + L E+ + + Y +L LC + +
Sbjct: 614 KISCLDDETANE--IEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFH 671
Query: 455 EALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
EAL ++ + E + + + + LI + + D A E +
Sbjct: 672 EALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVF 712
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 161/337 (47%), Gaps = 9/337 (2%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKL 316
P + + L+D CK +E A+ L+ +M K+ + N TY +L+ G + +G ++
Sbjct: 196 PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEM 255
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
E+M + G P+ +TYN ++ CK G +A +F+ MR +G S TY +I
Sbjct: 256 YEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGV---SCNIVTYNTLIGG 312
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
L + ++ E K++ M S G P++ TY +I+G C GK+ +A ++ ++G P
Sbjct: 313 LCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPS 372
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQ 496
+VTYN + C + A K+ M E PS TY +LI F D+ + A +
Sbjct: 373 LVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRL 432
Query: 497 EMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLG 556
ME+ G D TY V+I G + EA L + ++ K + +++ ++ G
Sbjct: 433 SMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEG 492
Query: 557 DLHAIHKLSDHM-RKFYNPAMAR-RYAIS---QKRKS 588
+ KL M K P +A RY I ++RKS
Sbjct: 493 SSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKS 529
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 139/282 (49%), Gaps = 4/282 (1%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMKL 316
P + +N +++ LCK + A ++ +MR + ++ N TYN L+ G CR K+
Sbjct: 266 PNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKV 325
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
+++M G P+ TYNT +D +C G + +A+ L ++++G SP+ TY I++
Sbjct: 326 VDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGL---SPSLVTYNILVSG 382
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
+ K++ M G P TY +I+ +++A + M G PD
Sbjct: 383 FCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPD 442
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQ 496
+ TY+ + C + EA +L+ M+E C P+ YN +I + + A + +
Sbjct: 443 VHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLK 502
Query: 497 EMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGI 538
EME++ + +Y MIE L K++EA L+E++I+ GI
Sbjct: 503 EMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGI 544
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 110/222 (49%), Gaps = 4/222 (1%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMKL 316
P + +N L+D C + A L + ++ + ++ + TYNILV G+CR + K+
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 395
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
++EM + G +P TY +DT+ ++ + +A+ L M G P TY+++I
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLV---PDVHTYSVLIHG 452
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
+M E +L M+ C P+ Y +I G C G A K L+EM K P+
Sbjct: 453 FCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPN 512
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNML 478
+ +Y + VLC +KS+EA +L +MI+ PS +++
Sbjct: 513 VASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 117/267 (43%), Gaps = 4/267 (1%)
Query: 292 TNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDL 351
T Y +++ + + +S + EM+ G P + +N L + +
Sbjct: 92 TKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSF 151
Query: 352 FEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEG 411
F ++K ++ I+I + +E+ F L+ + G P+V Y +I+G
Sbjct: 152 FNENKSK----VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDG 207
Query: 412 VCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPS 471
C G+I++A EMG G + TY + L N ++ ++Y +M E P+
Sbjct: 208 CCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPN 267
Query: 472 VQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLE 531
+ TYN +++ + AF+ + EM +RG + + TY +I GL K EA +++
Sbjct: 268 LYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVD 327
Query: 532 EVINKGIKLPYKKFDSFLIQLSDLGDL 558
++ + GI +++ + +G L
Sbjct: 328 QMKSDGINPNLITYNTLIDGFCGVGKL 354
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 88/169 (52%)
Query: 401 DVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLY 460
DV ++ +I+G C G+I++++ L E+ G+ P++V Y + C + E+A L+
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 461 GRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNC 520
M +L + + +TY +LI+ F+ FE +++M++ G + TY ++ L
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281
Query: 521 NKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMR 569
+T++A + +E+ +G+ +++ + L L+ +K+ D M+
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMK 330
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 90/211 (42%), Gaps = 5/211 (2%)
Query: 364 SPTAKT----YAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKID 419
S T+KT Y ++I + Q+ + M+ +G +P + ++ V +
Sbjct: 87 SETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFN 146
Query: 420 EAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLI 479
+ + F E +K D+ ++ ++ C+ + E++ L + E P+V Y LI
Sbjct: 147 QWWSFFNENKSK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLI 205
Query: 480 SMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
+ + + A + + EM K G + TY V+I GLF ++ + E++ G+
Sbjct: 206 DGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVF 265
Query: 540 LPYKKFDSFLIQLSDLGDLHAIHKLSDHMRK 570
++ + QL G ++ D MR+
Sbjct: 266 PNLYTYNCVMNQLCKDGRTKDAFQVFDEMRE 296
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 141/287 (49%), Gaps = 4/287 (1%)
Query: 254 VKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTR 312
K + ++ FN ++D+LCK V+ A L+K+M K I N TY+ L+ C +
Sbjct: 254 AKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSD 313
Query: 313 GMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAI 372
+LL +MI+ P+ T+N +D + K G EA L++ M + P TY
Sbjct: 314 ASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI---DPDIFTYNS 370
Query: 373 MIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKG 432
++ +DR+++ ++ +M+S C PDV TY +I+G C ++++ + EM ++G
Sbjct: 371 LVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRG 430
Query: 433 YPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAF 492
D VTY ++ L + + A K++ +M+ P + TY++L+ + A
Sbjct: 431 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 490
Query: 493 ETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
E + M+K LD Y MIEG+ K ++ L + KG+K
Sbjct: 491 EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 537
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 149/315 (47%), Gaps = 4/315 (1%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMK 315
+P+ F L+ L A L +M ++ N TY ++V G C+ +
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALN 246
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
LL +M D +NT +D+ CK + +A++LF+ M TKG P TY+ +I
Sbjct: 247 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI---RPNVVTYSSLIS 303
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
L R + +L+ MI P++ T+ +I+ GK EA K ++M + P
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 363
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
DI TYN + C + + ++A +++ M+ C P V TYN LI F + + E +
Sbjct: 364 DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELF 423
Query: 496 QEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDL 555
+EM RG DT TY +I+GLF+ + A + +++++ G+ + L L +
Sbjct: 424 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 483
Query: 556 GDLHAIHKLSDHMRK 570
G L ++ D+M+K
Sbjct: 484 GKLEKALEVFDYMQK 498
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 134/285 (47%), Gaps = 4/285 (1%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMK 315
QP + + ++++ LCK + A L KM I + +N ++ C+ R +
Sbjct: 222 QPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 281
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
L +EM G RP+ TY++ + C G ++A L M K +P T+ +I
Sbjct: 282 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI---NPNLVTFNALID 338
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
+ + E KL MI PD+ TY ++ G C+ ++D+A + E M +K P
Sbjct: 339 AFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFP 398
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
D+VTYN ++ C +K+ E+ +L+ M + TY LI F D D A + +
Sbjct: 399 DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 458
Query: 496 QEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKL 540
++M G D TY ++++GL N K E+A + + + IKL
Sbjct: 459 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 503
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 127/294 (43%), Gaps = 35/294 (11%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSP 310
I K P + FN L+DA K AE LY M ++ I+ + TYN LV G+C
Sbjct: 322 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRL 381
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKG----------- 359
+ ++ E M+ PD TYNT + +CK+ + + +LF M +G
Sbjct: 382 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 441
Query: 360 ---------------------STISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGC 398
S P TY+I++ L N ++E+ ++ YM S
Sbjct: 442 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501
Query: 399 LPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALK 458
D+ Y +IEG+C GK+D+ + + KG P++VTYN + LC + +EA
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 561
Query: 459 LYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCV 512
L +M E +P+ TYN LI D + E +EM R C D +
Sbjct: 562 LLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM--RSCRFVGDASTI 613
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 148/321 (46%), Gaps = 39/321 (12%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSP 310
++ + P I FN LL A+ K + L +KM+++ I TYNIL+ +CR
Sbjct: 77 VKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQI 136
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
+ + LL +M++LG+ P T ++ L+ YC I++AV L + M G P T+
Sbjct: 137 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG---YRPDTITF 193
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGK------------- 417
+I L +++ E L+ M+ GC P++ TY ++ G+C G
Sbjct: 194 TTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEA 253
Query: 418 ----------------------IDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEE 455
+D+A +EM KG P++VTY+ + LC + +
Sbjct: 254 AKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSD 313
Query: 456 ALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIE 515
A +L MIE + P++ T+N LI F + A + + +M KR + D TY ++
Sbjct: 314 ASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVN 373
Query: 516 GLFNCNKTEEACSLLEEVINK 536
G ++ ++A + E +++K
Sbjct: 374 GFCMHDRLDKAKQMFEFMVSK 394
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 1/210 (0%)
Query: 369 TYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEM 428
TY I+I + ++ L+G M+ G P + T ++ G C +I +A +++M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 429 GNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDP 488
GY PD +T+ + L + K+ EA+ L RM++ C P++ TY ++++ + D
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 489 DGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSF 548
D A +ME D + +I+ L ++A +L +E+ KGI+ + S
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Query: 549 LIQLSDLGDL-HAIHKLSDHMRKFYNPAMA 577
+ L G A LSD + K NP +
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLV 331
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 108/230 (46%), Gaps = 8/230 (3%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKM--RKIINTNAETYNILVFGWCRVRSPTRGMK 315
P++ +N L+ CK VE L+++M R ++ + TY L+ G K
Sbjct: 398 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG-DTVTYTTLIQGLFHDGDCDNAQK 456
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
+ ++M+ G PD TY+ LD C G + +A+++F++M+ + Y MI
Sbjct: 457 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD---IYIYTTMIE 513
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
+ + ++++ + L + G P+V TY +I G+C + EAY L++M G P
Sbjct: 514 GMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLP 573
Query: 436 DIVTYNCFLRV-LCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFE 484
+ TYN +R L D K+ A +L M R + T ++ +M +
Sbjct: 574 NSGTYNTLIRAHLRDGDKAASA-ELIREMRSCRFVGDASTIGLVANMLHD 622
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%)
Query: 382 RMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYN 441
++++ L G M+ S LP + + ++ + K D E+M + TYN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 442 CFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKR 501
+ C + AL L G+M++L PS+ T + L++ + A +M +
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 502 GCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKG 537
G DT T+ +I GLF NK EA +L++ ++ +G
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 220
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 102/233 (43%), Gaps = 15/233 (6%)
Query: 239 YLTHVQKFAKKKRIRVKTQ--PEINAFNLLLDALCKCCLVEY---------AEGLYKKM- 286
Y T ++ F K KR+ T+ E++ L+ D + L++ A+ ++K+M
Sbjct: 403 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 462
Query: 287 RKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMIT 346
+ + TY+IL+ G C + +++ + M + + D + Y T ++ CKAG +
Sbjct: 463 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 522
Query: 347 EAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYK 406
+ DLF + KG P TY MI L ++E + L+ M G LP+ TY
Sbjct: 523 DGWDLFCSLSLKGV---KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYN 579
Query: 407 DIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKL 459
+I G + + + EM + + D T +L D + + L +
Sbjct: 580 TLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFLDM 632
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 153/321 (47%), Gaps = 39/321 (12%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSP 310
++ + P I FN LL A+ K + L +KM+++ I+ N TYNIL+ +CR
Sbjct: 77 VKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQI 136
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
+ + LL +M++LG+ P T ++ L+ YC I++AV L + M G P T+
Sbjct: 137 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG---YRPDTITF 193
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLE---- 426
+I L +++ E L+ M+ GC P++ TY ++ G+C G ID A+ L
Sbjct: 194 TTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEA 253
Query: 427 -------------------------------EMGNKGYPPDIVTYNCFLRVLCDNKKSEE 455
EM NKG P+++TY+ + LC+ ++ +
Sbjct: 254 AKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSD 313
Query: 456 ALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIE 515
A +L MIE + P+V T+N LI F + A + + EM KR + D TY +I
Sbjct: 314 ASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 373
Query: 516 GLFNCNKTEEACSLLEEVINK 536
G ++ +EA + E +I+K
Sbjct: 374 GFCMHDRLDEAKHMFELMISK 394
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 148/320 (46%), Gaps = 4/320 (1%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSP 310
+ + +P+ F L+ L A L +M ++ N TY ++V G C+
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
LL +M + Y+T +D+ CK +A++LF M KG P TY
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV---RPNVITY 298
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGN 430
+ +I L +R + +L+ MI P+V T+ +I+ GK+ EA K +EM
Sbjct: 299 SSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIK 358
Query: 431 KGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDG 490
+ PDI TY+ + C + + +EA ++ MI C P+V TYN LI+ F + D
Sbjct: 359 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDE 418
Query: 491 AFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLI 550
E ++EM +RG +T TY +I G F + A + +++++ G+ +++ L
Sbjct: 419 GVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 478
Query: 551 QLSDLGDLHAIHKLSDHMRK 570
L G L + +++++
Sbjct: 479 GLCKNGKLEKAMVVFEYLQR 498
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 134/287 (46%), Gaps = 4/287 (1%)
Query: 254 VKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTR 312
K + + ++ ++D+LCK + A L+ +M K + N TY+ L+ C +
Sbjct: 254 AKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSD 313
Query: 313 GMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAI 372
+LL +MI+ P+ T+N +D + K G + EA L++ M + P TY+
Sbjct: 314 ASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI---DPDIFTYSS 370
Query: 373 MIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKG 432
+I +DR++E + MIS C P+V TY +I G C +IDE + EM +G
Sbjct: 371 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRG 430
Query: 433 YPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAF 492
+ VTY + + + A ++ +M+ P++ TYN L+ + + A
Sbjct: 431 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 490
Query: 493 ETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
++ +++ TY +MIEG+ K E+ L + KG+K
Sbjct: 491 VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 537
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 120/259 (46%), Gaps = 4/259 (1%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSP 310
I K P + FN L+DA K + AE LY +M ++ I+ + TY+ L+ G+C
Sbjct: 322 IERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 381
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
+ E MI P+ TYNT ++ +CKA I E V+LF M +G ++ T T
Sbjct: 382 DEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL 441
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGN 430
D + FK M+S G P++ TY +++G+C GK+++A E +
Sbjct: 442 IHGFFQARDCDNAQMVFK---QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 498
Query: 431 KGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDG 490
P I TYN + +C K E+ L+ + P V YN +IS F +
Sbjct: 499 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEE 558
Query: 491 AFETWQEMEKRGCNLDTDT 509
A +++M + G D+ T
Sbjct: 559 ADALFRKMREDGPLPDSGT 577
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 116/265 (43%), Gaps = 8/265 (3%)
Query: 313 GMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAI 372
+ L M++ P F +N L K + L E M+ G S TY I
Sbjct: 69 AIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGI---SHNLYTYNI 125
Query: 373 MIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKG 432
+I + ++ L+G M+ G P + T ++ G C +I +A +++M G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 433 YPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAF 492
Y PD +T+ + L + K+ EA+ L RM++ C P++ TY ++++ + D D AF
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 493 ETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK---LPYKKFDSFL 549
+ME + Y +I+ L ++A +L E+ NKG++ + Y S L
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305
Query: 550 IQLSDLGDLHAIHKLSDHMRKFYNP 574
D A LSD + + NP
Sbjct: 306 CNYERWSD--ASRLLSDMIERKINP 328
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 84/187 (44%)
Query: 382 RMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYN 441
++++ L G M+ S LP + + ++ + K D E+M G ++ TYN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 442 CFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKR 501
+ C + AL L G+M++L PS+ T + L++ + A +M +
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 502 GCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAI 561
G DT T+ +I GLF NK EA +L++ ++ +G + + + L GD+
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 562 HKLSDHM 568
L + M
Sbjct: 245 FNLLNKM 251
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 164/332 (49%), Gaps = 16/332 (4%)
Query: 242 HVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNIL 300
++K K+ + V T +L+D LCK LV A + K+M+ + I+ N TY+ L
Sbjct: 38 QMEKMGIKRDVVVDT--------ILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSL 89
Query: 301 VFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGS 360
+ G C+ + L EM P+ T++ +D Y K G +++ +++ M
Sbjct: 90 ITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSI 149
Query: 361 TISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDE 420
P TY+ +I L ++R++E K++ MIS GC P+V TY + G ++D+
Sbjct: 150 ---DPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDD 206
Query: 421 AYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLIS 480
K L++M +G + V+ N ++ K + AL ++G M IP++++YN++++
Sbjct: 207 GIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLA 266
Query: 481 MFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKL 540
F + + A ++ M+K +LD TY +MI G+ +EA L ++ K ++
Sbjct: 267 GLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEP 326
Query: 541 PYKKFDSFLIQLSDLGDLHAIHKLSDHMRKFY 572
+K + + +L+ G + +D + +FY
Sbjct: 327 DFKAYTIMIAELNRAG----MRTEADALNRFY 354
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 141/295 (47%), Gaps = 9/295 (3%)
Query: 282 LYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCK 341
+ K M+ I + T + LV G+C S + + +M ++G + D +DT CK
Sbjct: 1 MLKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCK 60
Query: 342 AGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPD 401
++ A+++ + M+ +G SP TY+ +I L ++ R+ + + + M S P+
Sbjct: 61 NRLVVPALEVLKRMKDRGI---SPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPN 117
Query: 402 VTTYKDIIEGVCLCGK---IDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALK 458
V T+ +I+ GK +D YK + +M P++ TY+ + LC + + +EA+K
Sbjct: 118 VITFSALIDAYAKRGKLSKVDSVYKMMIQMS---IDPNVFTYSSLIYGLCMHNRVDEAIK 174
Query: 459 LYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLF 518
+ MI C P+V TY+ L + FF+ D + +M +RG +T + +I+G F
Sbjct: 175 MLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYF 234
Query: 519 NCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMRKFYN 573
K + A + + + G+ + ++ L L G++ +HM+K N
Sbjct: 235 QAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRN 289
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 113/439 (25%), Positives = 195/439 (44%), Gaps = 25/439 (5%)
Query: 137 NLEK--ALDQLAIPLSTPLVTGVLHRLRYDEKIAFRFFTWAGNQENYSHEPCAYNDMMD- 193
N EK +L L ++ + + V+ R D I RFF W +Y +P N ++
Sbjct: 53 NWEKNSSLKSLVSHMNPNVASQVISLQRSDNDICVRFFMWVCKHSSYCFDPTQKNQLLKL 112
Query: 194 ILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEKYLTHVQKFAKKKRIR 253
I+SS Y+V IV ++ R K + + LR+ L +
Sbjct: 113 IVSSGLYRVAHAVIVA-LIKECSRCEKEMLKLMYCFDELREVFGFRLNY----------- 160
Query: 254 VKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRK-IINTNAETYNILVFGWCRVRSPTR 312
++ LL +L K L A Y++M Y +V C+
Sbjct: 161 -------PCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEA 213
Query: 313 GMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAI 372
+ +++++G D+ + L +C+ + +A+ +F+ M + +P + +Y+I
Sbjct: 214 AEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKE--VTCAPNSVSYSI 271
Query: 373 MIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKG 432
+I L + R+EE F L M GC P TY +I+ +C G ID+A+ +EM +G
Sbjct: 272 LIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRG 331
Query: 433 YPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAF 492
P++ TY + LC + K EEA + +M++ R PSV TYN LI+ + + AF
Sbjct: 332 CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAF 391
Query: 493 ETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQL 552
E MEKR C + T+ ++EGL K +A LL+ +++ G+ ++ + L
Sbjct: 392 ELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGL 451
Query: 553 SDLGDLHAIHKLSDHMRKF 571
G ++ +KL M F
Sbjct: 452 CREGHMNTAYKLLSSMNCF 470
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 132/282 (46%), Gaps = 4/282 (1%)
Query: 254 VKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTR 312
V P ++++L+ LC+ +E A GL +M K + TY +L+ C +
Sbjct: 260 VTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDK 319
Query: 313 GMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAI 372
L +EMI G +P+ TY +D C+ G I EA + M K P+ TY
Sbjct: 320 AFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM-VKDRIF--PSVITYNA 376
Query: 373 MIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKG 432
+I ++ R+ F+L+ M C P+V T+ +++EG+C GK +A L+ M + G
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG 436
Query: 433 YPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAF 492
PDIV+YN + LC A KL M P T+ +I+ F + D A
Sbjct: 437 LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVAS 496
Query: 493 ETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVI 534
M ++G +LD T +I+G+ KT +A +LE ++
Sbjct: 497 AFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLV 538
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 137/318 (43%), Gaps = 39/318 (12%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMRK-IINTNAETYNILVFGWCRVRSPTRGMK 315
+P ++ + +L+D LC+ +E A G+ +KM K I + TYN L+ G+C+ +
Sbjct: 333 KPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFE 392
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
LL M + +P+ T+N ++ C+ G +AV L + M G SP +Y ++I
Sbjct: 393 LLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGL---SPDIVSYNVLID 449
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
L + M +KL+ M PD T+ II C GK D A FL M KG
Sbjct: 450 GLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISL 509
Query: 436 DIVT-----------------------------------YNCFLRVLCDNKKSEEALKLY 460
D VT N L +L K +E L +
Sbjct: 510 DEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAML 569
Query: 461 GRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNC 520
G++ +L +PSV TY L+ D G+F + M+ GC + Y ++I GL
Sbjct: 570 GKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQF 629
Query: 521 NKTEEACSLLEEVINKGI 538
+ EEA LL + + G+
Sbjct: 630 GRVEEAEKLLSAMQDSGV 647
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 136/337 (40%), Gaps = 39/337 (11%)
Query: 249 KKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRK-IINTNAETYNILVFGWCRV 307
+K ++ + P + +N L++ CK V A L M K N T+N L+ G CRV
Sbjct: 360 RKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRV 419
Query: 308 RSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTA 367
P + + LL+ M+ G PD +YN +D C+ G + A L M P
Sbjct: 420 GKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDI---EPDC 476
Query: 368 KTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEE 427
T+ +I + + + +G M+ G D T +I+GVC GK +A LE
Sbjct: 477 LTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILET 536
Query: 428 MGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDD 487
+ + N L +L K +E L + G++ +L +PSV TY L+ D
Sbjct: 537 LVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGD 596
Query: 488 PDGAFETWQEMEKRGC-----------------------------------NLDTDTYCV 512
G+F + M+ GC + + TY V
Sbjct: 597 ITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTV 656
Query: 513 MIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFL 549
M++G N K + A + ++ +G +L + + S L
Sbjct: 657 MVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLL 693
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 123/293 (41%), Gaps = 33/293 (11%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMK 315
+P + FN L++ LC+ A L K+M ++ + +YN+L+ G CR K
Sbjct: 403 KPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYK 462
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYA---- 371
LL M PD T+ ++ +CK G A M KG ++ T T
Sbjct: 463 LLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVC 522
Query: 372 ----------------------------IMIVTLAQNDRMEECFKLMGYMISSGCLPDVT 403
+++ L++ +++E ++G + G +P V
Sbjct: 523 KVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVV 582
Query: 404 TYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRM 463
TY +++G+ G I +++ LE M G P++ Y + LC + EEA KL M
Sbjct: 583 TYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAM 642
Query: 464 IELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEG 516
+ P+ TY +++ + D A ET + M +RG L+ Y +++G
Sbjct: 643 QDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQG 695
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 138/307 (44%), Gaps = 30/307 (9%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMK 315
+P+ F +++A CK + A M RK I+ + T L+ G C+V +
Sbjct: 473 EPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALF 532
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
+LE ++++ + N LD K + E + + + G P+ TY ++
Sbjct: 533 ILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLV---PSVVTYTTLVD 589
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
L ++ + F+++ M SGCLP+V Y II G+C G+++EA K L M + G P
Sbjct: 590 GLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSP 649
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMF-FEMDDPDGAFE- 493
+ VTY ++ +N K + AL+ M+E + + Y+ L+ F D + E
Sbjct: 650 NHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEES 709
Query: 494 TWQEMEKRGCNLDTDTYCV-----MIEGLFNC---------------NKTEEACSLLEEV 533
T ++ R +TD C+ ++E L C +T+E+ L++ V
Sbjct: 710 TVSDIALR----ETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNV 765
Query: 534 INKGIKL 540
+ +G+ L
Sbjct: 766 LERGVFL 772
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 144/346 (41%), Gaps = 40/346 (11%)
Query: 251 RIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRS 309
++R+ T P ++ N++LD L K C V+ + K+ K+ + + TY LV G R
Sbjct: 539 KMRILTTP--HSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGD 596
Query: 310 PTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKT 369
T ++LE M G P+ + Y ++ C+ G + EA L M+ G SP T
Sbjct: 597 ITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSG---VSPNHVT 653
Query: 370 YAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGK------------ 417
Y +M+ N +++ + + M+ G + Y +++G L K
Sbjct: 654 YTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSD 713
Query: 418 ----------IDEAYKFLEEMGNKGYPPDIVTYNCFLRV--LCDNKKSEEALKLYGRMIE 465
I+E +E++G ++ C V LC +++E+ L ++E
Sbjct: 714 IALRETDPECINELISVVEQLGG------CISGLCIFLVTRLCKEGRTDESNDLVQNVLE 767
Query: 466 LRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEE 525
R + + ++++ + E + K G ++C++I+GL E
Sbjct: 768 -RGVFLEKAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAER 826
Query: 526 ACSLLEEVI-NKGI--KLPYKKFDSFLIQLSDLGDLHAIHKLSDHM 568
A L+ E++ + G+ K + L++ + GD + L D +
Sbjct: 827 ARELVMELLTSNGVVEKSGVLTYVECLMEGDETGDCSEVIDLVDQL 872
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 137/276 (49%), Gaps = 4/276 (1%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMRK-IINTNAETYNILVFGWCRVRSPTRGMK 315
QP++ + +++ LCK ++ A L KKM K I + YN ++ G C+ + +
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALN 279
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
L EM G RPD FTY++ + C G ++A L M + +P T++ +I
Sbjct: 280 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKI---NPNVVTFSALID 336
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
+ ++ E KL MI PD+ TY +I G C+ ++DEA E M +K P
Sbjct: 337 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 396
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
++VTY+ ++ C K+ EE ++L+ M + + + TY LI FF+ D D A +
Sbjct: 397 NVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 456
Query: 496 QEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLE 531
++M G + + TY ++++GL K +A + E
Sbjct: 457 KQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFE 492
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 151/321 (47%), Gaps = 39/321 (12%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSP 310
++ + P I FN LL A+ K E L ++M+ + I+ + TY+I + +CR
Sbjct: 75 VKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQL 134
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
+ + +L +M++LG+ PD T ++ L+ YC + I++AV L + M G P T+
Sbjct: 135 SLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY---KPDTFTF 191
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLE---- 426
+I L +++ E L+ M+ GC PD+ TY ++ G+C G ID A L+
Sbjct: 192 TTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEK 251
Query: 427 -------------------------------EMGNKGYPPDIVTYNCFLRVLCDNKKSEE 455
EM NKG PD+ TY+ + LC+ + +
Sbjct: 252 GKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSD 311
Query: 456 ALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIE 515
A +L MIE + P+V T++ LI F + A + + EM KR + D TY +I
Sbjct: 312 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 371
Query: 516 GLFNCNKTEEACSLLEEVINK 536
G ++ +EA + E +I+K
Sbjct: 372 GFCMHDRLDEAKHMFELMISK 392
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 140/291 (48%), Gaps = 4/291 (1%)
Query: 249 KKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRV 307
KK + K + ++ +N ++D LCK ++ A L+ +M K I + TY+ L+ C
Sbjct: 247 KKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 306
Query: 308 RSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTA 367
+ +LL +MI+ P+ T++ +D + K G + EA L++ M + P
Sbjct: 307 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI---DPDI 363
Query: 368 KTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEE 427
TY+ +I +DR++E + MIS C P+V TY +I+G C +++E + E
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFRE 423
Query: 428 MGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDD 487
M +G + VTY + + + A ++ +M+ + P++ TYN+L+ +
Sbjct: 424 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 483
Query: 488 PDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGI 538
A ++ +++ D TY +MIEG+ K E+ L + KG+
Sbjct: 484 LAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGV 534
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 119/243 (48%), Gaps = 3/243 (1%)
Query: 296 TYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFM 355
TY +V G C+ + LL++M + D YNT +D CK + +A++LF M
Sbjct: 225 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEM 284
Query: 356 RTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLC 415
KG P TY+ +I L R + +L+ MI P+V T+ +I+
Sbjct: 285 DNKGI---RPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 341
Query: 416 GKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTY 475
GK+ EA K +EM + PDI TY+ + C + + +EA ++ MI C P+V TY
Sbjct: 342 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 401
Query: 476 NMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVIN 535
+ LI F + + E ++EM +RG +T TY +I G F + A + +++++
Sbjct: 402 STLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 461
Query: 536 KGI 538
G+
Sbjct: 462 VGV 464
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 145/308 (47%), Gaps = 11/308 (3%)
Query: 206 RIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEKYLTHVQKFAKKKRIRVKTQPEINAFNL 265
R++ DM++ ++ N + V L+ K E L +K + I+ P+I ++
Sbjct: 314 RLLSDMIE--RKINPNVVTFSALIDAFVK--EGKLVEAEKLYDE-MIKRSIDPDIFTYSS 368
Query: 266 LLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLG 324
L++ C ++ A+ +++ M K N TY+ L+ G+C+ + GM+L EM Q G
Sbjct: 369 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRG 428
Query: 325 HRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRME 384
+ TY T + + +A A +F+ M + G P TY I++ L +N ++
Sbjct: 429 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV---HPNILTYNILLDGLCKNGKLA 485
Query: 385 ECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFL 444
+ + Y+ S PD+ TY +IEG+C GK+++ ++ + KG P+++ YN +
Sbjct: 486 KAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMI 545
Query: 445 RVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCN 504
C EEA L +M E +P+ TYN LI D + + E +EM R C
Sbjct: 546 SGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM--RSCG 603
Query: 505 LDTDTYCV 512
D +
Sbjct: 604 FAGDASTI 611
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 131/283 (46%), Gaps = 4/283 (1%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSP 310
I K P + F+ L+DA K + AE LY +M ++ I+ + TY+ L+ G+C
Sbjct: 320 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 379
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
+ E MI P+ TY+T + +CKA + E ++LF M +G ++ T T
Sbjct: 380 DEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTL 439
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGN 430
D + FK M+S G P++ TY +++G+C GK+ +A E +
Sbjct: 440 IHGFFQARDCDNAQMVFK---QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 496
Query: 431 KGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDG 490
PDI TYN + +C K E+ +L+ + P+V YN +IS F +
Sbjct: 497 STMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEE 556
Query: 491 AFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEV 533
A ++M++ G ++ TY +I E + L++E+
Sbjct: 557 ADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 108/228 (47%), Gaps = 4/228 (1%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKL 316
P + ++ L+ CK VE L+++M ++ + N TY L+ G+ + R +
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 455
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
++M+ +G P+ TYN LD CK G + +A+ +FE+++ + P TY IMI
Sbjct: 456 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ---RSTMEPDIYTYNIMIEG 512
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
+ + ++E+ ++L + G P+V Y +I G C G +EA L++M G P+
Sbjct: 513 MCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPN 572
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFE 484
TYN +R + E + +L M T ++ +M +
Sbjct: 573 SGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHD 620
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 117/263 (44%), Gaps = 4/263 (1%)
Query: 313 GMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAI 372
+ L +M++ P +N L K + L E M+T G S TY+I
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI---SHDLYTYSI 123
Query: 373 MIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKG 432
I + ++ ++ M+ G PD+ T ++ G C +I +A +++M G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 433 YPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAF 492
Y PD T+ + L + K+ EA+ L +M++ C P + TY +++ + D D A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 493 ETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQL 552
++MEK D Y +I+GL ++A +L E+ NKGI+ + S + L
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 553 SDLGDLH-AIHKLSDHMRKFYNP 574
+ G A LSD + + NP
Sbjct: 304 CNYGRWSDASRLLSDMIERKINP 326
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 105/233 (45%), Gaps = 15/233 (6%)
Query: 239 YLTHVQKFAKKKRIRVKTQ--PEINAFNLLLDALCKCCLV---------EYAEGLYKKMR 287
Y T ++ F K KR+ + E++ L+ + + L+ + A+ ++K+M
Sbjct: 401 YSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 460
Query: 288 KI-INTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMIT 346
+ ++ N TYNIL+ G C+ + M + E + + PD +TYN ++ CKAG +
Sbjct: 461 SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVE 520
Query: 347 EAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYK 406
+ +LF + KG SP Y MI + EE L+ M G LP+ TY
Sbjct: 521 DGWELFCNLSLKGV---SPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYN 577
Query: 407 DIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKL 459
+I G + + + ++EM + G+ D T +L D + + L +
Sbjct: 578 TLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDM 630
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 92/210 (43%)
Query: 361 TISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDE 420
+ +S + I+ L+ ++++ L G M+ S P + + ++ V K +
Sbjct: 42 SFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFEL 101
Query: 421 AYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLIS 480
E+M G D+ TY+ F+ C + AL + +M++L P + T + L++
Sbjct: 102 VISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLN 161
Query: 481 MFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKL 540
+ A +M + G DT T+ +I GLF NK EA +L+++++ +G +
Sbjct: 162 GYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQP 221
Query: 541 PYKKFDSFLIQLSDLGDLHAIHKLSDHMRK 570
+ + + L GD+ L M K
Sbjct: 222 DLVTYGTVVNGLCKRGDIDLALSLLKKMEK 251
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 153/321 (47%), Gaps = 39/321 (12%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSP 310
++ + P I FN LL A+ K E L ++M+ + I+ + TY+I + +CR
Sbjct: 75 VKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQL 134
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
+ + +L +M++LG+ PD T ++ L+ YC + I++AV L + M G P T+
Sbjct: 135 SLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY---KPDTFTF 191
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLE---- 426
+I L +++ E L+ M+ GC PD+ TY ++ G+C G ID A L
Sbjct: 192 TTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEA 251
Query: 427 -------------------------------EMGNKGYPPDIVTYNCFLRVLCDNKKSEE 455
EM KG P++VTYN + LC+ + +
Sbjct: 252 ARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSD 311
Query: 456 ALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIE 515
A +L M+E + P+V T+N LI FF+ A + +EM +R + DT TY ++I
Sbjct: 312 ASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLIN 371
Query: 516 GLFNCNKTEEACSLLEEVINK 536
G N+ +EA + + +++K
Sbjct: 372 GFCMHNRLDEAKQMFKFMVSK 392
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 158/357 (44%), Gaps = 39/357 (10%)
Query: 250 KRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVR 308
K +++ +P+I + LL+ C + A L +M ++ + T+ L+ G
Sbjct: 143 KMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHN 202
Query: 309 SPTRGMKLLEEMIQLGHRPDNFTY-----------------------------------N 333
+ + L+++M+Q G +PD TY N
Sbjct: 203 KASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFN 262
Query: 334 TALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYM 393
T +D+ CK + AVDLF M TKG P TY +I L R + +L+ M
Sbjct: 263 TIIDSLCKYRHVEVAVDLFTEMETKGI---RPNVVTYNSLINCLCNYGRWSDASRLLSNM 319
Query: 394 ISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKS 453
+ P+V T+ +I+ GK+ EA K EEM + PD +TYN + C + +
Sbjct: 320 LEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRL 379
Query: 454 EEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVM 513
+EA +++ M+ C+P++QTYN LI+ F + + E ++EM +RG +T TY +
Sbjct: 380 DEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTI 439
Query: 514 IEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMRK 570
I+G F + A + +++++ + + L L G L + +++K
Sbjct: 440 IQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQK 496
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 134/284 (47%), Gaps = 6/284 (2%)
Query: 248 KKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCR 306
K + R+K I FN ++D+LCK VE A L+ +M K I N TYN L+ C
Sbjct: 248 KMEAARIKANVVI--FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCN 305
Query: 307 VRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPT 366
+ +LL M++ P+ T+N +D + K G + EA L E M + P
Sbjct: 306 YGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI---DPD 362
Query: 367 AKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLE 426
TY ++I ++R++E ++ +M+S CLP++ TY +I G C C ++++ +
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFR 422
Query: 427 EMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMD 486
EM +G + VTY ++ + A ++ +M+ R + TY++L+
Sbjct: 423 EMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYG 482
Query: 487 DPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLL 530
D A ++ ++K L+ Y MIEG+ K EA L
Sbjct: 483 KLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLF 526
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 152/324 (46%), Gaps = 14/324 (4%)
Query: 188 YNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEKYLTHVQKFA 247
YN +++ L + R++ +ML+ K+ N + V L+ + E L +K
Sbjct: 296 YNSLINCLCNYGRWSDASRLLSNMLE--KKINPNVVTFNALIDAF--FKEGKLVEAEKL- 350
Query: 248 KKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCR 306
++ I+ P+ +NLL++ C ++ A+ ++K M K N +TYN L+ G+C+
Sbjct: 351 HEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCK 410
Query: 307 VRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPT 366
+ G++L EM Q G + TY T + + +AG A +F+ M + PT
Sbjct: 411 CKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSN----RVPT 466
Query: 367 -AKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFL 425
TY+I++ L +++ + Y+ S ++ Y +IEG+C GK+ EA+
Sbjct: 467 DIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLF 526
Query: 426 EEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEM 485
+ K PD+VTYN + LC + +EA L+ +M E +P+ TYN LI
Sbjct: 527 CSLSIK---PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRD 583
Query: 486 DDPDGAFETWQEMEKRGCNLDTDT 509
D + E +EM G D T
Sbjct: 584 CDRAASAELIKEMRSSGFVGDAST 607
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 9/211 (4%)
Query: 345 ITEAVDLFEFMRTKGSTISS---PTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPD 401
+ +AVDLF G + S P+ + ++ +A+ ++ E L M + G D
Sbjct: 64 VDDAVDLF------GDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHD 117
Query: 402 VTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYG 461
+ TY I C ++ A L +M GY PDIVT + L C +K+ +A+ L
Sbjct: 118 LYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVD 177
Query: 462 RMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCN 521
+M+E+ P T+ LI F + A +M +RGC D TY ++ GL
Sbjct: 178 QMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG 237
Query: 522 KTEEACSLLEEVINKGIKLPYKKFDSFLIQL 552
+ A +LL ++ IK F++ + L
Sbjct: 238 DIDLALNLLNKMEAARIKANVVIFNTIIDSL 268
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 84/187 (44%)
Query: 382 RMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYN 441
++++ L G M+ S P + + ++ V K + E+M G D+ TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 442 CFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKR 501
F+ C + AL + +M++L P + T + L++ + A +M +
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 502 GCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAI 561
G DT T+ +I GLF NK EA +L+++++ +G + + + + L GD+
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 562 HKLSDHM 568
L + M
Sbjct: 243 LNLLNKM 249
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 152/321 (47%), Gaps = 39/321 (12%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSP 310
++ + P I FN LL A+ K + L ++M+ + I+ + +YNIL+ +CR
Sbjct: 72 VQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQL 131
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
+ +L +M++LG+ PD T ++ L+ YC I+EAV L + M P T+
Sbjct: 132 PLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME---YQPNTVTF 188
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLE---- 426
+I L +++ E L+ M++ GC PD+ TY ++ G+C G ID A L+
Sbjct: 189 NTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEK 248
Query: 427 -------------------------------EMGNKGYPPDIVTYNCFLRVLCDNKKSEE 455
EM NKG P++VTYN +R LC+ + +
Sbjct: 249 GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD 308
Query: 456 ALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIE 515
A +L MIE + P+V T++ LI F + A + + EM KR + D TY +I
Sbjct: 309 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 368
Query: 516 GLFNCNKTEEACSLLEEVINK 536
G ++ +EA + E +I+K
Sbjct: 369 GFCMHDRLDEAKHMFELMISK 389
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 141/292 (48%), Gaps = 4/292 (1%)
Query: 249 KKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRV 307
KK + K + ++ + ++DALC V A L+ +M K I N TYN L+ C
Sbjct: 244 KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 303
Query: 308 RSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTA 367
+ +LL +MI+ P+ T++ +D + K G + EA L++ M + P
Sbjct: 304 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI---DPDI 360
Query: 368 KTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEE 427
TY+ +I +DR++E + MIS C P+V TY +I+G C +++E + E
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420
Query: 428 MGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDD 487
M +G + VTYN ++ L + A K++ +M+ P + TY++L+ +
Sbjct: 421 MSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGK 480
Query: 488 PDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
+ A ++ ++K D TY +MIEG+ K E+ L + KG+K
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 532
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 155/357 (43%), Gaps = 39/357 (10%)
Query: 250 KRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVR 308
K +++ +P+I + LL+ C + A L +M + N T+N L+ G
Sbjct: 140 KMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHN 199
Query: 309 SPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMI----------------------- 345
+ + L++ M+ G +PD FTY T ++ CK G I
Sbjct: 200 KASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYT 259
Query: 346 ------------TEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYM 393
+A++LF M KG P TY +I L R + +L+ M
Sbjct: 260 TIIDALCNYKNVNDALNLFTEMDNKGI---RPNVVTYNSLIRCLCNYGRWSDASRLLSDM 316
Query: 394 ISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKS 453
I P+V T+ +I+ GK+ EA K +EM + PDI TY+ + C + +
Sbjct: 317 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 376
Query: 454 EEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVM 513
+EA ++ MI C P+V TYN LI F + + E ++EM +RG +T TY +
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436
Query: 514 IEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMRK 570
I+GLF + A + +++++ G+ + L L G L + ++++K
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK 493
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 147/316 (46%), Gaps = 8/316 (2%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMK 315
+P + +N L+ LC A L M + IN N T++ L+ + + K
Sbjct: 287 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 346
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
L +EMI+ PD FTY++ ++ +C + EA +FE M +K P TY +I
Sbjct: 347 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF---PNVVTYNTLIK 403
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
+ R+EE +L M G + + TY +I+G+ G D A K ++M + G PP
Sbjct: 404 GFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP 463
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
DI+TY+ L LC K E+AL ++ + + + P + TYN++I + + ++ +
Sbjct: 464 DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 523
Query: 496 QEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLI--QLS 553
+ +G + Y MI G EEA +L E+ G LP + LI +L
Sbjct: 524 CSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG-TLPNSGTYNTLIRARLR 582
Query: 554 DLGDLHAIHKLSDHMR 569
D GD A +L MR
Sbjct: 583 D-GDKAASAELIKEMR 597
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 159/353 (45%), Gaps = 10/353 (2%)
Query: 168 AFRFFTWAGNQENYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEV 227
A FT N+ YN ++ L + R++ DM++ ++ N + V
Sbjct: 274 ALNLFTEMDNK-GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE--RKINPNVVTFSA 330
Query: 228 LMTILRKYTEKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM- 286
L+ K E L +K + I+ P+I ++ L++ C ++ A+ +++ M
Sbjct: 331 LIDAFVK--EGKLVEAEKLYDE-MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 387
Query: 287 RKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMIT 346
K N TYN L+ G+C+ + GM+L EM Q G + TYNT + +AG
Sbjct: 388 SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCD 447
Query: 347 EAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYK 406
A +F+ M + G P TY+I++ L + ++E+ + Y+ S PD+ TY
Sbjct: 448 MAQKIFKKMVSDGV---PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYN 504
Query: 407 DIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIEL 466
+IEG+C GK+++ + + KG P+++ Y + C EEA L+ M E
Sbjct: 505 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED 564
Query: 467 RCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFN 519
+P+ TYN LI D + E +EM G D T ++I L +
Sbjct: 565 GTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHD 617
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 133/283 (46%), Gaps = 4/283 (1%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSP 310
I K P + F+ L+DA K + AE LY +M ++ I+ + TY+ L+ G+C
Sbjct: 317 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 376
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
+ E MI P+ TYNT + +CKA + E ++LF M +G ++ T Y
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT---Y 433
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGN 430
+I L Q + K+ M+S G PD+ TY +++G+C GK+++A E +
Sbjct: 434 NTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK 493
Query: 431 KGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDG 490
PDI TYN + +C K E+ L+ + P+V Y +IS F +
Sbjct: 494 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 553
Query: 491 AFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEV 533
A ++EM++ G ++ TY +I + L++E+
Sbjct: 554 ADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 596
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 117/263 (44%), Gaps = 4/263 (1%)
Query: 313 GMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAI 372
+ L EM+Q P +N L K + L E M+ + S +Y I
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQ---NLRISYDLYSYNI 120
Query: 373 MIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKG 432
+I + ++ ++G M+ G PD+ T ++ G C +I EA +++M
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 433 YPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAF 492
Y P+ VT+N + L + K+ EA+ L RM+ C P + TY +++ + D D A
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 493 ETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQL 552
++MEK D Y +I+ L N +A +L E+ NKGI+ ++S + L
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 553 SDLGDLH-AIHKLSDHMRKFYNP 574
+ G A LSD + + NP
Sbjct: 301 CNYGRWSDASRLLSDMIERKINP 323
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 103/233 (44%), Gaps = 15/233 (6%)
Query: 239 YLTHVQKFAKKKRI-------RVKTQPEINA----FNLLLDALCKCCLVEYAEGLYKKM- 286
Y T ++ F K KR+ R +Q + +N L+ L + + A+ ++KKM
Sbjct: 398 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 457
Query: 287 RKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMIT 346
+ + TY+IL+ G C+ + + + E + + PD +TYN ++ CKAG +
Sbjct: 458 SDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVE 517
Query: 347 EAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYK 406
+ DLF + KG P Y MI + EE L M G LP+ TY
Sbjct: 518 DGWDLFCSLSLKGV---KPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYN 574
Query: 407 DIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKL 459
+I G + + ++EM + G+ D T + + +L D + + L++
Sbjct: 575 TLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEM 627
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 81/189 (42%)
Query: 382 RMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYN 441
++++ L G M+ S LP + + ++ + K D E M N D+ +YN
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 442 CFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKR 501
+ C + AL + G+M++L P + T + L++ + A +M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 502 GCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAI 561
+T T+ +I GLF NK EA +L++ ++ +G + + + + L GD+
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 562 HKLSDHMRK 570
L M K
Sbjct: 240 LSLLKKMEK 248
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 137/300 (45%), Gaps = 4/300 (1%)
Query: 253 RVKTQPEINAFNLLLDALCKCC-LVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPT 311
R +P + ++ LC+ C L E E + +R+ I + Y L+ G+C+
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 312 RGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYA 371
K EM PD TY + +C+ G + EA LF M KG P + T+
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL---EPDSVTFT 425
Query: 372 IMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNK 431
+I + M++ F++ +MI +GC P+V TY +I+G+C G +D A + L EM
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 432 GYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGA 491
G P+I TYN + LC + EEA+KL G TY L+ + + + D A
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 492 FETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQ 551
E +EM +G T+ V++ G E+ LL ++ KGI F+S + Q
Sbjct: 546 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQ 605
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 154/347 (44%), Gaps = 15/347 (4%)
Query: 236 TEKYLTHVQKFAKKKRIRVKTQ-----------PEINAFNLLLDALCKCC-LVEYAEGLY 283
T Y T + F K+ IR ++ P++ + ++ C+ +VE + +
Sbjct: 351 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 410
Query: 284 KKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAG 343
+ K + ++ T+ L+ G+C+ ++ MIQ G P+ TY T +D CK G
Sbjct: 411 EMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 470
Query: 344 MITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVT 403
+ A +L M G P TY ++ L ++ +EE KL+G ++G D
Sbjct: 471 DLDSANELLHEMWKIGL---QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV 527
Query: 404 TYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRM 463
TY +++ C G++D+A + L+EM KG P IVT+N + C + E+ KL M
Sbjct: 528 TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587
Query: 464 IELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKT 523
+ P+ T+N L+ + ++ A +++M RG D TY +++G
Sbjct: 588 LAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNM 647
Query: 524 EEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMRK 570
+EA L +E+ KG + + + ++ D MR+
Sbjct: 648 KEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRR 694
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 143/293 (48%), Gaps = 4/293 (1%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMK 315
+P+ F L++ CK ++ A ++ M + + N TY L+ G C+ +
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 477
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
LL EM ++G +P+ FTYN+ ++ CK+G I EAV L G +++ T TY ++
Sbjct: 478 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG--LNADTV-TYTTLMD 534
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
++ M++ +++ M+ G P + T+ ++ G CL G +++ K L M KG P
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 594
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
+ T+N ++ C + A +Y M P +TY L+ + + A+ +
Sbjct: 595 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 654
Query: 496 QEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSF 548
QEM+ +G ++ TY V+I+G K EA + +++ +G+ + FD F
Sbjct: 655 QEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFF 707
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 127/280 (45%), Gaps = 4/280 (1%)
Query: 260 INAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMKLLE 318
+ ++N+++ +C+ ++ A L M K + +Y+ +V G+CR + KL+E
Sbjct: 246 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE 305
Query: 319 EMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLA 378
M + G +P+++ Y + + C+ + EA + F M +G P Y +I
Sbjct: 306 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL---PDTVVYTTLIDGFC 362
Query: 379 QNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIV 438
+ + K M S PDV TY II G C G + EA K EM KG PD V
Sbjct: 363 KRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSV 422
Query: 439 TYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEM 498
T+ + C ++A +++ MI+ C P+V TY LI + D D A E EM
Sbjct: 423 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
Query: 499 EKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGI 538
K G + TY ++ GL EEA L+ E G+
Sbjct: 483 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 136/284 (47%), Gaps = 4/284 (1%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSP 310
I+ P + + L+D LCK ++ A L +M KI + N TYN +V G C+ +
Sbjct: 448 IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI 507
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
+KL+ E G D TY T +D YCK+G + +A ++ + M KG PT T+
Sbjct: 508 EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL---QPTIVTF 564
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGN 430
+++ + +E+ KL+ +M++ G P+ TT+ +++ C+ + A ++M +
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624
Query: 431 KGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDG 490
+G PD TY ++ C + +EA L+ M SV TY++LI F +
Sbjct: 625 RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 684
Query: 491 AFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVI 534
A E + +M + G D + + + + + + ++E+I
Sbjct: 685 AREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEII 728
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 88/200 (44%)
Query: 369 TYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEM 428
+Y I+I + Q R++E L+ M G PDV +Y ++ G C G++D+ +K +E M
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 429 GNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDP 488
KG P+ Y + +LC K EA + + MI +P Y LI F + D
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 489 DGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSF 548
A + + EM R D TY +I G EA L E+ KG++ F
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 549 LIQLSDLGDLHAIHKLSDHM 568
+ G + ++ +HM
Sbjct: 428 INGYCKAGHMKDAFRVHNHM 447
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 158/391 (40%), Gaps = 32/391 (8%)
Query: 205 FRIVCDMLDYMKRKNKSTVP---VEVLMTILRKYTEKYLTHVQKFAKKKRIRVKTQPEIN 261
+R+V D D+ + + S + + + + + K + + + F ++ ++ V T +
Sbjct: 101 YRLVLDFFDWARSRRDSNLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNV-TDSFVQ 159
Query: 262 AFNLLL-------------DALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVR 308
F+LL+ D + LV++ GL ++ R++ +L C V
Sbjct: 160 FFDLLVYTYKDWGSDPRVFDVFFQV-LVDF--GLLREARRVFEKMLNYGLVLSVDSCNVY 216
Query: 309 ---------SPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKG 359
+ + E ++G + +YN + C+ G I EA L M KG
Sbjct: 217 LTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKG 276
Query: 360 STISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKID 419
T P +Y+ ++ + +++ +KL+ M G P+ Y II +C K+
Sbjct: 277 YT---PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLA 333
Query: 420 EAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLI 479
EA + EM +G PD V Y + C A K + M P V TY +I
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393
Query: 480 SMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
S F ++ D A + + EM +G D+ T+ +I G ++A + +I G
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453
Query: 540 LPYKKFDSFLIQLSDLGDLHAIHKLSDHMRK 570
+ + + L GDL + ++L M K
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 137/300 (45%), Gaps = 4/300 (1%)
Query: 253 RVKTQPEINAFNLLLDALCKCC-LVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPT 311
R +P + ++ LC+ C L E E + +R+ I + Y L+ G+C+
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 312 RGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYA 371
K EM PD TY + +C+ G + EA LF M KG P + T+
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL---EPDSVTFT 425
Query: 372 IMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNK 431
+I + M++ F++ +MI +GC P+V TY +I+G+C G +D A + L EM
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 432 GYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGA 491
G P+I TYN + LC + EEA+KL G TY L+ + + + D A
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 492 FETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQ 551
E +EM +G T+ V++ G E+ LL ++ KGI F+S + Q
Sbjct: 546 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQ 605
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 154/347 (44%), Gaps = 15/347 (4%)
Query: 236 TEKYLTHVQKFAKKKRIRVKTQ-----------PEINAFNLLLDALCKCC-LVEYAEGLY 283
T Y T + F K+ IR ++ P++ + ++ C+ +VE + +
Sbjct: 351 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 410
Query: 284 KKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAG 343
+ K + ++ T+ L+ G+C+ ++ MIQ G P+ TY T +D CK G
Sbjct: 411 EMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 470
Query: 344 MITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVT 403
+ A +L M G P TY ++ L ++ +EE KL+G ++G D
Sbjct: 471 DLDSANELLHEMWKIGL---QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV 527
Query: 404 TYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRM 463
TY +++ C G++D+A + L+EM KG P IVT+N + C + E+ KL M
Sbjct: 528 TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587
Query: 464 IELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKT 523
+ P+ T+N L+ + ++ A +++M RG D TY +++G
Sbjct: 588 LAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNM 647
Query: 524 EEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMRK 570
+EA L +E+ KG + + + ++ D MR+
Sbjct: 648 KEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRR 694
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 143/293 (48%), Gaps = 4/293 (1%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMK 315
+P+ F L++ CK ++ A ++ M + + N TY L+ G C+ +
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 477
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
LL EM ++G +P+ FTYN+ ++ CK+G I EAV L G +++ T TY ++
Sbjct: 478 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG--LNADTV-TYTTLMD 534
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
++ M++ +++ M+ G P + T+ ++ G CL G +++ K L M KG P
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 594
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
+ T+N ++ C + A +Y M P +TY L+ + + A+ +
Sbjct: 595 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 654
Query: 496 QEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSF 548
QEM+ +G ++ TY V+I+G K EA + +++ +G+ + FD F
Sbjct: 655 QEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFF 707
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 127/280 (45%), Gaps = 4/280 (1%)
Query: 260 INAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMKLLE 318
+ ++N+++ +C+ ++ A L M K + +Y+ +V G+CR + KL+E
Sbjct: 246 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE 305
Query: 319 EMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLA 378
M + G +P+++ Y + + C+ + EA + F M +G P Y +I
Sbjct: 306 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL---PDTVVYTTLIDGFC 362
Query: 379 QNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIV 438
+ + K M S PDV TY II G C G + EA K EM KG PD V
Sbjct: 363 KRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSV 422
Query: 439 TYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEM 498
T+ + C ++A +++ MI+ C P+V TY LI + D D A E EM
Sbjct: 423 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
Query: 499 EKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGI 538
K G + TY ++ GL EEA L+ E G+
Sbjct: 483 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 522
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 136/284 (47%), Gaps = 4/284 (1%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSP 310
I+ P + + L+D LCK ++ A L +M KI + N TYN +V G C+ +
Sbjct: 448 IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI 507
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
+KL+ E G D TY T +D YCK+G + +A ++ + M KG PT T+
Sbjct: 508 EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL---QPTIVTF 564
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGN 430
+++ + +E+ KL+ +M++ G P+ TT+ +++ C+ + A ++M +
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624
Query: 431 KGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDG 490
+G PD TY ++ C + +EA L+ M SV TY++LI F +
Sbjct: 625 RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 684
Query: 491 AFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVI 534
A E + +M + G D + + + + + + ++E+I
Sbjct: 685 AREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEII 728
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 88/200 (44%)
Query: 369 TYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEM 428
+Y I+I + Q R++E L+ M G PDV +Y ++ G C G++D+ +K +E M
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 429 GNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDP 488
KG P+ Y + +LC K EA + + MI +P Y LI F + D
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 489 DGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSF 548
A + + EM R D TY +I G EA L E+ KG++ F
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 549 LIQLSDLGDLHAIHKLSDHM 568
+ G + ++ +HM
Sbjct: 428 INGYCKAGHMKDAFRVHNHM 447
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 158/391 (40%), Gaps = 32/391 (8%)
Query: 205 FRIVCDMLDYMKRKNKSTVP---VEVLMTILRKYTEKYLTHVQKFAKKKRIRVKTQPEIN 261
+R+V D D+ + + S + + + + + K + + + F ++ ++ V T +
Sbjct: 101 YRLVLDFFDWARSRRDSNLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNV-TDSFVQ 159
Query: 262 AFNLLL-------------DALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVR 308
F+LL+ D + LV++ GL ++ R++ +L C V
Sbjct: 160 FFDLLVYTYKDWGSDPRVFDVFFQV-LVDF--GLLREARRVFEKMLNYGLVLSVDSCNVY 216
Query: 309 ---------SPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKG 359
+ + E ++G + +YN + C+ G I EA L M KG
Sbjct: 217 LTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKG 276
Query: 360 STISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKID 419
T P +Y+ ++ + +++ +KL+ M G P+ Y II +C K+
Sbjct: 277 YT---PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLA 333
Query: 420 EAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLI 479
EA + EM +G PD V Y + C A K + M P V TY +I
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393
Query: 480 SMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
S F ++ D A + + EM +G D+ T+ +I G ++A + +I G
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453
Query: 540 LPYKKFDSFLIQLSDLGDLHAIHKLSDHMRK 570
+ + + L GDL + ++L M K
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 140/287 (48%), Gaps = 4/287 (1%)
Query: 254 VKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTR 312
K + ++ FN ++D+LCK V+ A L+K+M K I N TY+ L+ C +
Sbjct: 179 AKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSD 238
Query: 313 GMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAI 372
+LL +MI+ P+ T+N +D + K G EA L + M + P TY
Sbjct: 239 ASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSI---DPDIFTYNS 295
Query: 373 MIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKG 432
+I +DR+++ ++ +M+S C PD+ TY +I+G C ++++ + EM ++G
Sbjct: 296 LINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG 355
Query: 433 YPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAF 492
D VTY ++ L + + A K++ +M+ P + TY++L+ + A
Sbjct: 356 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 415
Query: 493 ETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
E + M+K LD Y MIEG+ K ++ L + KG+K
Sbjct: 416 EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 462
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 148/315 (46%), Gaps = 4/315 (1%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMK 315
+P+ F L+ L A L +M ++ N TY ++V G C+
Sbjct: 112 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 171
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
LL +M D +NT +D+ CK + +A++LF+ M TKG P TY+ +I
Sbjct: 172 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI---RPNVVTYSSLIS 228
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
L R + +L+ MI P++ T+ +I+ GK EA K ++M + P
Sbjct: 229 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDP 288
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
DI TYN + C + + ++A +++ M+ C P + TYN LI F + + E +
Sbjct: 289 DIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELF 348
Query: 496 QEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDL 555
+EM RG DT TY +I+GLF+ + A + +++++ G+ + L L +
Sbjct: 349 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 408
Query: 556 GDLHAIHKLSDHMRK 570
G L ++ D+M+K
Sbjct: 409 GKLEKALEVFDYMQK 423
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 142/288 (49%), Gaps = 4/288 (1%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSP 310
++ + P I FN LL A+ K + L +KM+++ I+ N TYNIL+ +CR
Sbjct: 2 VKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQI 61
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
+ + LL +M++LG+ P T ++ L+ YC I++AV L + M G P T+
Sbjct: 62 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG---YRPDTITF 118
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGN 430
+I L +++ E L+ M+ GC P++ TY ++ G+C G ID A+ L +M
Sbjct: 119 TTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEA 178
Query: 431 KGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDG 490
D+V +N + LC + ++AL L+ M P+V TY+ LIS
Sbjct: 179 AKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSD 238
Query: 491 AFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGI 538
A + +M ++ N + T+ +I+ K EA L +++I + I
Sbjct: 239 ASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSI 286
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 134/285 (47%), Gaps = 4/285 (1%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMK 315
QP + + ++++ LCK ++ A L KM I + +N ++ C+ R +
Sbjct: 147 QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 206
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
L +EM G RP+ TY++ + C G ++A L M K +P T+ +I
Sbjct: 207 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI---NPNLVTFNALID 263
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
+ + E KL MI PD+ TY +I G C+ ++D+A + E M +K P
Sbjct: 264 AFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFP 323
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
D+ TYN ++ C +K+ E+ +L+ M + TY LI F D D A + +
Sbjct: 324 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 383
Query: 496 QEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKL 540
++M G D TY ++++GL N K E+A + + + IKL
Sbjct: 384 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 428
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 143/289 (49%), Gaps = 4/289 (1%)
Query: 249 KKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRV 307
+K R+ + +N+L++ C+ + A L KM K+ + T + L+ G+C
Sbjct: 34 EKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 93
Query: 308 RSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTA 367
+ + + L+++M+++G+RPD T+ T + +EAV L + M +G P
Sbjct: 94 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG---CQPNL 150
Query: 368 KTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEE 427
TY +++ L + ++ F L+ M ++ DV + II+ +C +D+A +E
Sbjct: 151 VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKE 210
Query: 428 MGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDD 487
M KG P++VTY+ + LC + +A +L MIE + P++ T+N LI F +
Sbjct: 211 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 270
Query: 488 PDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINK 536
A + +M KR + D TY +I G ++ ++A + E +++K
Sbjct: 271 FVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSK 319
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 126/294 (42%), Gaps = 35/294 (11%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSP 310
I K P + FN L+DA K AE L+ M ++ I+ + TYN L+ G+C
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKG----------- 359
+ ++ E M+ PD TYNT + +CK+ + + +LF M +G
Sbjct: 307 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 366
Query: 360 ---------------------STISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGC 398
S P TY+I++ L N ++E+ ++ YM S
Sbjct: 367 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Query: 399 LPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALK 458
D+ Y +IEG+C GK+D+ + + KG P++VTYN + LC + +EA
Sbjct: 427 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 486
Query: 459 LYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCV 512
L +M E +P TYN LI D + E +EM R C D +
Sbjct: 487 LLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM--RSCRFVGDASTI 538
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 112/252 (44%), Gaps = 4/252 (1%)
Query: 327 PDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEEC 386
P F +N L K + L E M+ G S TY I+I + ++
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGI---SHNLYTYNILINCFCRRSQISLA 64
Query: 387 FKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRV 446
L+G M+ G P + T ++ G C +I +A +++M GY PD +T+ +
Sbjct: 65 LALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 124
Query: 447 LCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLD 506
L + K+ EA+ L RM++ C P++ TY ++++ + D D AF +ME D
Sbjct: 125 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAD 184
Query: 507 TDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDL-HAIHKLS 565
+ +I+ L ++A +L +E+ KGI+ + S + L G A LS
Sbjct: 185 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 244
Query: 566 DHMRKFYNPAMA 577
D + K NP +
Sbjct: 245 DMIEKKINPNLV 256
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 109/230 (47%), Gaps = 8/230 (3%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKM--RKIINTNAETYNILVFGWCRVRSPTRGMK 315
P+++ +N L+ CK VE L+++M R ++ + TY L+ G K
Sbjct: 323 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG-DTVTYTTLIQGLFHDGDCDNAQK 381
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
+ ++M+ G PD TY+ LD C G + +A+++F++M+ + Y MI
Sbjct: 382 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD---IYIYTTMIE 438
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
+ + ++++ + L + G P+V TY +I G+C + EAY L++M G P
Sbjct: 439 GMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLP 498
Query: 436 DIVTYNCFLRV-LCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFE 484
D TYN +R L D K+ A +L M R + T ++ +M +
Sbjct: 499 DSGTYNTLIRAHLRDGDKAASA-ELIREMRSCRFVGDASTIGLVANMLHD 547
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 103/235 (43%), Gaps = 15/235 (6%)
Query: 237 EKYLTHVQKFAKKKRIRVKTQ--PEINAFNLLLDALCKCCLVE---------YAEGLYKK 285
+ Y T ++ F K KR+ T+ E++ L+ D + L++ A+ ++K+
Sbjct: 326 DTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 385
Query: 286 M-RKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGM 344
M + + TY+IL+ G C + +++ + M + + D + Y T ++ CKAG
Sbjct: 386 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 445
Query: 345 ITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTT 404
+ + DLF + KG P TY MI L ++E + L+ M G LPD T
Sbjct: 446 VDDGWDLFCSLSLKGV---KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGT 502
Query: 405 YKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKL 459
Y +I G + + + EM + + D T +L D + + L +
Sbjct: 503 YNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSFLDM 557
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 161/332 (48%), Gaps = 8/332 (2%)
Query: 218 KNKSTVPVEVLMTIL-RKYTEKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLV 276
K +P V+ TIL + Y K + V + + ++ ++ +N +L LCK ++
Sbjct: 402 KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461
Query: 277 EYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTA 335
A+ L+ +M + + ++ T IL+ G C++ + M+L ++M + R D TYNT
Sbjct: 462 GEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTL 521
Query: 336 LDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMIS 395
LD + K G I A +++ M +K PT +Y+I++ L + E F++ MIS
Sbjct: 522 LDGFGKVGDIDTAKEIWADMVSKEIL---PTPISYSILVNALCSKGHLAEAFRVWDEMIS 578
Query: 396 SGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEE 455
P V +I+G C G + FLE+M ++G+ PD ++YN + + +
Sbjct: 579 KNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSK 638
Query: 456 ALKLYGRMIELR--CIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVM 513
A L +M E + +P V TYN ++ F + A ++M +RG N D TY M
Sbjct: 639 AFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCM 698
Query: 514 IEGLFNCNKTEEACSLLEEVINKGIKLPYKKF 545
I G + + EA + +E++ +G P KF
Sbjct: 699 INGFVSQDNLTEAFRIHDEMLQRGFS-PDDKF 729
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 142/313 (45%), Gaps = 6/313 (1%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKL 316
P+I +N L+ A L+E A L M K + TYN ++ G C+ R ++
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
EM++ G PD+ TY + L CK G + E +F MR++ P ++ M+
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVV---PDLVCFSSMMSL 384
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
++ +++ + +G +PD Y +I+G C G I A EM +G D
Sbjct: 385 FTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMD 444
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQ 496
+VTYN L LC K EA KL+ M E P T +LI ++ + A E +Q
Sbjct: 445 VVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQ 504
Query: 497 EMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQ-LSDL 555
+M+++ LD TY +++G + A + ++++K I LP S L+ L
Sbjct: 505 KMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEI-LPTPISYSILVNALCSK 563
Query: 556 GDLHAIHKLSDHM 568
G L ++ D M
Sbjct: 564 GHLAEAFRVWDEM 576
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 107/468 (22%), Positives = 189/468 (40%), Gaps = 71/468 (15%)
Query: 121 VDKVCNTMMDNLHGFNNLEKALDQLAIPLSTPLVTGVLHRLRYDEKIAFRFFTWAGNQ-E 179
V+K+C ++ G NN+ L +L PL+ V VL+R R D + RF G
Sbjct: 55 VEKICFSLK---QGNNNVRNHLIRLN-PLA---VVEVLYRCRNDLTLGQRFVDQLGFHFP 107
Query: 180 NYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVP-VEVLMTILRKYT-- 236
N+ H + + M+ IL V+ R+ ++ +S V +E++ ++ ++
Sbjct: 108 NFKHTSLSLSAMIHIL------VRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNC 161
Query: 237 ----EKYLTHVQKFAKKKRIRVKTQP-----------EINAFNLLLDALCKCCLVEYAEG 281
+ ++ + + +++R + I+A N L+ +L + VE A G
Sbjct: 162 GSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWG 221
Query: 282 LYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYC 340
+Y+++ R + N T NI+V C+ + L ++ + G PD TYNT + Y
Sbjct: 222 VYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYS 281
Query: 341 KAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLP 400
G+ MEE F+LM M G P
Sbjct: 282 SKGL--------------------------------------MEEAFELMNAMPGKGFSP 303
Query: 401 DVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLY 460
V TY +I G+C GK + A + EM G PD TY L C E K++
Sbjct: 304 GVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVF 363
Query: 461 GRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNC 520
M +P + ++ ++S+F + D A + +++ G D Y ++I+G
Sbjct: 364 SDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRK 423
Query: 521 NKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHM 568
A +L E++ +G + +++ L L L KL + M
Sbjct: 424 GMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEM 471
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 92/224 (41%), Gaps = 2/224 (0%)
Query: 348 AVDLFEFMRTKGSTISS--PTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTY 405
V E + + ST S+ + ++I T Q ++ E + + S G +
Sbjct: 144 GVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDAC 203
Query: 406 KDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIE 465
+I + G ++ A+ +E+ G ++ T N + LC + K E+ ++ E
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 466 LRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEE 525
P + TYN LIS + + AFE M +G + TY +I GL K E
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER 323
Query: 526 ACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMR 569
A + E++ G+ + S L++ GD+ K+ MR
Sbjct: 324 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMR 367
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 179/397 (45%), Gaps = 11/397 (2%)
Query: 164 DEKIAFRFFTWAGNQENYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTV 223
D + F A Q+ ++H Y+ ++D L + K+F V +L MK +
Sbjct: 68 DPQGVLDIFNKASQQKGFNHNNATYSVLLDNL----VRHKKFLAVDAILHQMKYET-CRF 122
Query: 224 PVEVLMTILRKYTEKYL-THVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGL 282
+ + ++R ++ L V + ++ + +P +NA + L+ L V + L
Sbjct: 123 QESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKL 182
Query: 283 --YKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLG-HRPDNFTYNTALDTY 339
Y K + N +NILV C+ ++EEM + G P++ TY+T +D
Sbjct: 183 LLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCL 242
Query: 340 CKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCL 399
EAV+LFE M +K SP T+ +MI + +E K++ +M +GC
Sbjct: 243 FAHSRSKEAVELFEDMISKEGI--SPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCN 300
Query: 400 PDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKL 459
P+V Y ++ G C GKI EA + +E+ G D V Y + C N +++EA+KL
Sbjct: 301 PNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKL 360
Query: 460 YGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFN 519
G M RC TYN+++ + A + + G +L+ +Y +++ L
Sbjct: 361 LGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCC 420
Query: 520 CNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLG 556
+ E+A L + +GI + ++ +++L + G
Sbjct: 421 NGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESG 457
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 112/223 (50%), Gaps = 4/223 (1%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMRK-IINTNAETYNILVFGWCRVRSPTRGMKL 316
P+ FN++++ C+ VE A+ + M+K N N Y+ L+ G+C+V +
Sbjct: 266 PDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQT 325
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
+E+ + G + D Y T ++ +C+ G EA+ L M K S + T TY +++
Sbjct: 326 FDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEM--KASRCRADTL-TYNVILRG 382
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
L+ R EE +++ S G + +Y+ I+ +C G++++A KFL M +G P
Sbjct: 383 LSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPH 442
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLI 479
T+N + LC++ +E +++ + + IP +++ ++
Sbjct: 443 HATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVV 485
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 153/320 (47%), Gaps = 4/320 (1%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSP 310
+ + QP+ F L+ L + A L ++M K + TY ++ G C+ P
Sbjct: 162 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 221
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
+ LL +M + D Y+T +D+ CK + +A++LF M KG P TY
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI---RPDVFTY 278
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGN 430
+ +I L R + +L+ M+ P+V T+ +I+ GK+ EA K +EM
Sbjct: 279 SSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 338
Query: 431 KGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDG 490
+ P+IVTYN + C + + +EA +++ M+ C+P V TYN LI+ F +
Sbjct: 339 RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVD 398
Query: 491 AFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLI 550
E +++M +RG +T TY +I G F + + A + +++++ G+ +++ L
Sbjct: 399 GMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 458
Query: 551 QLSDLGDLHAIHKLSDHMRK 570
L G L + ++++K
Sbjct: 459 GLCKNGKLEKAMVVFEYLQK 478
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 147/321 (45%), Gaps = 39/321 (12%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSP 310
++ + P I F+ LL A+ K + +KM + ++ N TYNI++ CR
Sbjct: 57 VKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQL 116
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
+ + +L +M++LG+ P T N+ L+ +C I+EAV L + M G P T+
Sbjct: 117 SFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG---YQPDTVTF 173
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGK------------- 417
++ L Q+++ E L+ M+ GC PD+ TY +I G+C G+
Sbjct: 174 TTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEK 233
Query: 418 ----------------------IDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEE 455
+D+A EM NKG PD+ TY+ + LC+ + +
Sbjct: 234 GKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSD 293
Query: 456 ALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIE 515
A +L M+E + P+V T+N LI F + A + + EM +R + + TY +I
Sbjct: 294 ASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLIN 353
Query: 516 GLFNCNKTEEACSLLEEVINK 536
G ++ +EA + +++K
Sbjct: 354 GFCMHDRLDEAQQIFTLMVSK 374
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 136/286 (47%), Gaps = 4/286 (1%)
Query: 255 KTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRG 313
K + ++ ++ ++D+LCK V+ A L+ +M K I + TY+ L+ C +
Sbjct: 235 KIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDA 294
Query: 314 MKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIM 373
+LL +M++ P+ T+N+ +D + K G + EA LF+ M + P TY +
Sbjct: 295 SRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI---DPNIVTYNSL 351
Query: 374 IVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGY 433
I +DR++E ++ M+S CLPDV TY +I G C K+ + + +M +G
Sbjct: 352 INGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGL 411
Query: 434 PPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFE 493
+ VTY + + A ++ +M+ P++ TYN L+ + + A
Sbjct: 412 VGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMV 471
Query: 494 TWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
++ ++K D TY +M EG+ K E+ L + KG+K
Sbjct: 472 VFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVK 517
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 133/300 (44%), Gaps = 37/300 (12%)
Query: 255 KTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRG 313
K P + FN L+DA K + AE L+ +M ++ I+ N TYN L+ G+C
Sbjct: 305 KINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEA 364
Query: 314 MKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKG---STIS------- 363
++ M+ PD TYNT ++ +CKA + + ++LF M +G +T++
Sbjct: 365 QQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHG 424
Query: 364 ----------------------SPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPD 401
P TY ++ L +N ++E+ + Y+ S PD
Sbjct: 425 FFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPD 484
Query: 402 VTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYG 461
+ TY + EG+C GK+++ + + KG PD++ YN + C EEA L+
Sbjct: 485 IYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFI 544
Query: 462 RMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNL--DTDTYCVMIEGLFN 519
+M E +P TYN LI D + E +EM R C D TY ++ + L +
Sbjct: 545 KMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM--RSCRFAGDASTYGLVTDMLHD 602
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 114/263 (43%), Gaps = 4/263 (1%)
Query: 313 GMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAI 372
+ L EM++ P ++ L K + E M G S TY I
Sbjct: 49 AVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGV---SHNLYTYNI 105
Query: 373 MIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKG 432
MI L + ++ ++G M+ G P + T ++ G C +I EA +++M G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 433 YPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAF 492
Y PD VT+ + L + K+ EA+ L RM+ C P + TY +I+ + +PD A
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 493 ETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQL 552
+MEK D Y +I+ L ++A +L E+ NKGI+ + S + L
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 553 SDLGDLH-AIHKLSDHMRKFYNP 574
+ G A LSD + + NP
Sbjct: 286 CNYGRWSDASRLLSDMLERKINP 308
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 76/156 (48%)
Query: 382 RMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYN 441
+++E L G M+ S P + + ++ + K D F E+M G ++ TYN
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 442 CFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKR 501
+ LC + AL + G+M++L PS+ T N L++ F + A +M +
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 502 GCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKG 537
G DT T+ ++ GLF NK EA +L+E ++ KG
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG 200
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 4/174 (2%)
Query: 279 AEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALD 337
A+ ++K+M ++ N TYN L+ G C+ + M + E + + PD +TYN +
Sbjct: 434 AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSE 493
Query: 338 TYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSG 397
CKAG + + DLF + KG P Y MI + EE + L M G
Sbjct: 494 GMCKAGKVEDGWDLFCSLSLKGV---KPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDG 550
Query: 398 CLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNK 451
LPD TY +I G + + ++EM + + D TY +L D +
Sbjct: 551 PLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGR 604
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 158/359 (44%), Gaps = 45/359 (12%)
Query: 221 STVPVEVLMTI-LRKYTEKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCK---CCLV 276
S P + L I L Y + HV +K IR+K +P + N LL L + +
Sbjct: 126 SPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSI 185
Query: 277 EYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKLLEEMI-QLGHRPDNFTYNT 334
A ++ M KI ++ N +T+N+LV G+C + +LE M+ + PDN TYNT
Sbjct: 186 SSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNT 245
Query: 335 ALDT-----------------------------------YCKAGMITEAVDLFEFMRTKG 359
L YCK G + EA + E M+
Sbjct: 246 ILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMK--- 302
Query: 360 STISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKID 419
T P TY I+I L M E +LM M S PDV TY +I+G G
Sbjct: 303 QTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSL 362
Query: 420 EAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCI-PSVQTYNML 478
EA K +E+M N G + VT+N L+ LC +K E + ++++ P + TY+ L
Sbjct: 363 EARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTL 422
Query: 479 ISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKG 537
I + ++ D GA E +EM ++G ++T T +++ L K +EA +LL +G
Sbjct: 423 IKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRG 481
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 119/256 (46%), Gaps = 4/256 (1%)
Query: 296 TYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFM 355
TYNIL+ G C S G++L++ M L +PD TYNT +D + G+ EA L E M
Sbjct: 312 TYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQM 371
Query: 356 RTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMIS-SGCLPDVTTYKDIIEGVCL 414
G + T + I + L + ++ E + + ++ G PD+ TY +I+
Sbjct: 372 ENDGVKANQVT---HNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLK 428
Query: 415 CGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQT 474
G + A + + EMG KG + +T N L LC +K +EA L + I T
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVT 488
Query: 475 YNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVI 534
Y LI FF + + A E W EM+K T+ +I GL + KTE A +E+
Sbjct: 489 YGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELA 548
Query: 535 NKGIKLPYKKFDSFLI 550
G+ F+S ++
Sbjct: 549 ESGLLPDDSTFNSIIL 564
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 137/310 (44%), Gaps = 41/310 (13%)
Query: 264 NLLLDALCKCCLVEYAEGLYKKMRKIINTNA-----ETYNILVFGWCRVRSPTRGMKLLE 318
N+ L LCK E E + +K++++++ + TY+ L+ + +V + ++++
Sbjct: 384 NISLKWLCK---EEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMR 440
Query: 319 EMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTIS--------------- 363
EM Q G + + T NT LD CK + EA +L +G +
Sbjct: 441 EMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREE 500
Query: 364 -----------------SPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYK 406
+PT T+ +I L + + E + + SG LPD +T+
Sbjct: 501 KVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFN 560
Query: 407 DIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIEL 466
II G C G++++A++F E + PD T N L LC +E+AL + +IE
Sbjct: 561 SIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEE 620
Query: 467 RCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEA 526
R + +V TYN +IS F + A++ EME++G D TY I L K E
Sbjct: 621 REVDTV-TYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSET 679
Query: 527 CSLLEEVINK 536
LL++ K
Sbjct: 680 DELLKKFSGK 689
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 156/354 (44%), Gaps = 42/354 (11%)
Query: 254 VKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTR 312
+K QP++ +N L+D + L A L ++M + N T+NI + C+
Sbjct: 339 LKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREA 398
Query: 313 GMKLLEEMIQL-GHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYA 371
+ ++E++ + G PD TY+T + Y K G ++ A+++ M KG +++ T T
Sbjct: 399 VTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNT-- 456
Query: 372 IMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNK 431
++ L + +++E L+ G + D TY +I G K+++A + +EM
Sbjct: 457 -ILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKV 515
Query: 432 GYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGA 491
P + T+N + LC + K+E A++ + + E +P T+N +I + + + A
Sbjct: 516 KITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKA 575
Query: 492 FETWQEMEKRG-------CNL---------------------------DTDTYCVMIEGL 517
FE + E K CN+ DT TY MI
Sbjct: 576 FEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAF 635
Query: 518 FNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMRKF 571
K +EA LL E+ KG++ ++SF+ L + G L +L ++KF
Sbjct: 636 CKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDEL---LKKF 686
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 117/247 (47%), Gaps = 7/247 (2%)
Query: 297 YNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNT---ALDTYCKAGMITEAVDLFE 353
++I + + P +++ ++MI+L +P+ T NT L Y + I+ A ++F+
Sbjct: 134 FDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFD 193
Query: 354 FMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCL-PDVTTYKDIIEGV 412
M G +++ +T+ +++ ++E+ ++ M+S + PD TY I++ +
Sbjct: 194 DMVKIGVSLN---VQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAM 250
Query: 413 CLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSV 472
G++ + + L +M G P+ VTYN + C +EA ++ M + +P +
Sbjct: 251 SKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDL 310
Query: 473 QTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEE 532
TYN+LI+ E M+ D TY +I+G F + EA L+E+
Sbjct: 311 CTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQ 370
Query: 533 VINKGIK 539
+ N G+K
Sbjct: 371 MENDGVK 377
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 85/180 (47%), Gaps = 5/180 (2%)
Query: 253 RVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPT 311
+VK P ++ FN L+ LC E A + ++ + + + T+N ++ G+C+
Sbjct: 514 KVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVE 573
Query: 312 RGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYA 371
+ + E I+ +PDN+T N L+ CK GM +A++ F + + + TY
Sbjct: 574 KAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTV----TYN 629
Query: 372 IMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNK 431
MI ++ +++E + L+ M G PD TY I + GK+ E + L++ K
Sbjct: 630 TMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGK 689
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 101/226 (44%), Gaps = 3/226 (1%)
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
LL + L P ++ AL Y G A+ +F+ M + T T I +V
Sbjct: 118 LLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLV 177
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNK-GYP 434
+ + ++ M+ G +V T+ ++ G CL GK+++A LE M ++
Sbjct: 178 RYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVN 237
Query: 435 PDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFET 494
PD VTYN L+ + + + +L M + +P+ TYN L+ + ++ AF+
Sbjct: 238 PDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQI 297
Query: 495 WQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKL 540
+ M++ D TY ++I GL N E L++ + K +KL
Sbjct: 298 VELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAM--KSLKL 341
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 51/102 (50%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPT 311
I+ +P+ N+LL+ LCK + E A + + + + TYN ++ +C+ +
Sbjct: 583 IKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLK 642
Query: 312 RGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFE 353
LL EM + G PD FTYN+ + + G ++E +L +
Sbjct: 643 EAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLK 684
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 153/356 (42%), Gaps = 45/356 (12%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKL 316
P + L+ +L KC V A L ++M + +AET+N ++ G C+ K+
Sbjct: 250 PNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKM 309
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
+ M+ G PD+ TY ++ CK G + A DLF I P + +I
Sbjct: 310 VNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF-------YRIPKPEIVIFNTLIHG 362
Query: 377 LAQNDRMEECFKLMGYMISS------------------------------------GCLP 400
+ R+++ ++ M++S GC P
Sbjct: 363 FVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKP 422
Query: 401 DVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLY 460
+V +Y +++G C GKIDEAY L EM G P+ V +NC + C + EA++++
Sbjct: 423 NVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIF 482
Query: 461 GRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNC 520
M C P V T+N LIS E+D+ A ++M G +T TY +I
Sbjct: 483 REMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRR 542
Query: 521 NKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHM-RKFYNPA 575
+ +EA L+ E++ +G L ++S + L G++ L + M R + P+
Sbjct: 543 GEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPS 598
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 179/393 (45%), Gaps = 17/393 (4%)
Query: 151 TPLVTGVLHRLRYDEKIAFRFFTWAGNQENYSHEPCAYNDMMDILSSTKYKVKQFRIVCD 210
TP L L + + F+W G+Q Y H Y ++ L + +F+ +
Sbjct: 77 TPFQLYKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGAN----GEFKTIDR 132
Query: 211 MLDYMKRKNKSTVPVEVL-MTILRKYTEK-YLTHVQKFAKKKRIRVKTQPEINAFNLLLD 268
+L ++ K++ V E L ++I+R Y + + + + R +P ++N++L+
Sbjct: 133 LL--IQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLE 190
Query: 269 ALCKC-CLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRP 327
L C A Y + + I T+ +++ +C V + LL +M + G P
Sbjct: 191 ILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVP 250
Query: 328 DNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECF 387
++ Y T + + K + EA+ L E M G P A+T+ +I+ L + DR+ E
Sbjct: 251 NSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCV---PDAETFNDVILGLCKFDRINEAA 307
Query: 388 KLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVL 447
K++ M+ G PD TY ++ G+C G++D A + P+IV +N +
Sbjct: 308 KMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGF 363
Query: 448 CDNKKSEEALKLYGRMI-ELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLD 506
+ + ++A + M+ +P V TYN LI +++ A E +M +GC +
Sbjct: 364 VTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPN 423
Query: 507 TDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
+Y ++++G K +EA ++L E+ G+K
Sbjct: 424 VYSYTILVDGFCKLGKIDEAYNVLNEMSADGLK 456
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 150/320 (46%), Gaps = 12/320 (3%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMRK-IINTNAETYNILVFGWCRVRSPTRGMK 315
+P + ++ +L+D CK ++ A + +M + N +N L+ +C+ ++
Sbjct: 421 KPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVE 480
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
+ EM + G +PD +T+N+ + C+ I A+ L M ++G ++ TY +I
Sbjct: 481 IFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANT---VTYNTLIN 537
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
+ ++E KL+ M+ G D TY +I+G+C G++D+A E+M G+ P
Sbjct: 538 AFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAP 597
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
++ N + LC + EEA++ M+ P + T+N LI+ + +
Sbjct: 598 SNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMF 657
Query: 496 QEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDL 555
++++ G DT T+ ++ L +AC LL+E I G +P + S L+Q
Sbjct: 658 RKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGF-VPNHRTWSILLQ---- 712
Query: 556 GDLHAIHKLSDHMRKFYNPA 575
I + + R+FYN A
Sbjct: 713 ---SIIPQETLDRRRFYNAA 729
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Query: 249 KKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINT-NAETYNILVFGWCRV 307
+K +R P + N+L++ LC+ +VE A K+M +T + T+N L+ G CR
Sbjct: 588 EKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 647
Query: 308 RSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTA 367
G+ + ++ G PD T+NT + CK G + +A L + G P
Sbjct: 648 GRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFV---PNH 704
Query: 368 KTYAIMIVTLAQNDRME 384
+T++I++ ++ + ++
Sbjct: 705 RTWSILLQSIIPQETLD 721
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 151/318 (47%), Gaps = 4/318 (1%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMKL 316
P++ F +L+DALCK A MR + I N TYN L+ G RV ++L
Sbjct: 361 PDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEL 420
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
M LG +P +TY +D Y K+G A++ FE M+TKG +P + +
Sbjct: 421 FGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGI---APNIVACNASLYS 477
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
LA+ R E ++ + G +PD TY +++ G+IDEA K L EM G PD
Sbjct: 478 LAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPD 537
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQ 496
++ N + L + +EA K++ RM E++ P+V TYN L++ + A E ++
Sbjct: 538 VIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFE 597
Query: 497 EMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLG 556
M ++GC +T T+ + + L ++ A +L ++++ G +++ + L G
Sbjct: 598 GMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNG 657
Query: 557 DLHAIHKLSDHMRKFYNP 574
+ M+K P
Sbjct: 658 QVKEAMCFFHQMKKLVYP 675
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 142/291 (48%), Gaps = 17/291 (5%)
Query: 287 RKIINTNAETYNILVFGWCRVRSPTRGMK----LLEEMIQLGHRPDNFTYNTALDTYCKA 342
++II + TY + +F V+ G+K L +M + G + ++YN + K+
Sbjct: 146 KRIIKRDTNTY-LTIFKSLSVKG---GLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKS 201
Query: 343 GMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDV 402
TEA++++ M +G P+ +TY+ ++V L + ++ L+ M + G P+V
Sbjct: 202 RFCTEAMEVYRRMILEGF---RPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNV 258
Query: 403 TTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGR 462
T+ I + GKI+EAY+ L+ M ++G PD+VTY + LC +K + A +++ +
Sbjct: 259 YTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEK 318
Query: 463 MIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNK 522
M R P TY L+ F + D D + W EMEK G D T+ ++++ L
Sbjct: 319 MKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGN 378
Query: 523 TEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMRKFYN 573
EA L+ + ++GI +++ + L +H+L D + F N
Sbjct: 379 FGEAFDTLDVMRDQGILPNLHTYNTLIC------GLLRVHRLDDALELFGN 423
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 145/312 (46%), Gaps = 10/312 (3%)
Query: 241 THVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNI 299
T +KF K + QP++ +NLL+ L + ++E A+ ++ +++ + TYN
Sbjct: 770 TLFEKFTKD----LGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNF 825
Query: 300 LVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLF-EFMRTK 358
L+ + + +L +EM + T+N + KAG + +A+DL+ + M +
Sbjct: 826 LLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDR 885
Query: 359 GSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKI 418
SPTA TY +I L+++ R+ E +L M+ GC P+ Y +I G G+
Sbjct: 886 DF---SPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEA 942
Query: 419 DEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNML 478
D A + M +G PD+ TY+ + LC + +E L + + E P V YN++
Sbjct: 943 DAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLI 1002
Query: 479 ISMFFEMDDPDGAFETWQEME-KRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKG 537
I+ + + A + EM+ RG D TY +I L EEA + E+ G
Sbjct: 1003 INGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAG 1062
Query: 538 IKLPYKKFDSFL 549
++ F++ +
Sbjct: 1063 LEPNVFTFNALI 1074
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 121/257 (47%), Gaps = 4/257 (1%)
Query: 284 KKMRKI-INTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKA 342
+KMR+ NA +YN L+ + R T M++ MI G RP TY++ + K
Sbjct: 177 RKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKR 236
Query: 343 GMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDV 402
I + L + M T G P T+ I I L + ++ E ++++ M GC PDV
Sbjct: 237 RDIDSVMGLLKEMETLGL---KPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDV 293
Query: 403 TTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGR 462
TY +I+ +C K+D A + E+M + PD VTY L DN+ + + +
Sbjct: 294 VTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSE 353
Query: 463 MIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNK 522
M + +P V T+ +L+ + + AF+T M +G + TY +I GL ++
Sbjct: 354 MEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHR 413
Query: 523 TEEACSLLEEVINKGIK 539
++A L + + G+K
Sbjct: 414 LDDALELFGNMESLGVK 430
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 118/247 (47%), Gaps = 4/247 (1%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMK 315
+P + ++ L+ L K ++ GL K+M + + N T+ I + R +
Sbjct: 220 RPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYE 279
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
+L+ M G PD TY +D C A + A ++FE M+T P TY ++
Sbjct: 280 ILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRH---KPDRVTYITLLD 336
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
+ N ++ + M G +PDV T+ +++ +C G EA+ L+ M ++G P
Sbjct: 337 RFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILP 396
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
++ TYN + L + ++AL+L+G M L P+ TY + I + + D A ET+
Sbjct: 397 NLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETF 456
Query: 496 QEMEKRG 502
++M+ +G
Sbjct: 457 EKMKTKG 463
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 116/250 (46%), Gaps = 6/250 (2%)
Query: 264 NLLLDALCKCCLVEYAEGLYKKM--RKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMI 321
N+++ L K V+ A LY + + + A TY L+ G + +L E M+
Sbjct: 859 NIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGML 918
Query: 322 QLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQND 381
G RP+ YN ++ + KAG A LF+ M +G P KTY++++ L
Sbjct: 919 DYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGV---RPDLKTYSVLVDCLCMVG 975
Query: 382 RMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEM-GNKGYPPDIVTY 440
R++E + SG PDV Y II G+ +++EA EM ++G PD+ TY
Sbjct: 976 RVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTY 1035
Query: 441 NCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEK 500
N + L EEA K+Y + P+V T+N LI + P+ A+ +Q M
Sbjct: 1036 NSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVT 1095
Query: 501 RGCNLDTDTY 510
G + +T TY
Sbjct: 1096 GGFSPNTGTY 1105
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 104/224 (46%), Gaps = 5/224 (2%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMK 315
P + L+D L K + A+ L++ M N YNIL+ G+ +
Sbjct: 888 SPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACA 947
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
L + M++ G RPD TY+ +D C G + E + F+ ++ G +P Y ++I
Sbjct: 948 LFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGL---NPDVVCYNLIIN 1004
Query: 376 TLAQNDRMEECFKLMGYMISS-GCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYP 434
L ++ R+EE L M +S G PD+ TY +I + + G ++EA K E+ G
Sbjct: 1005 GLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLE 1064
Query: 435 PDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNML 478
P++ T+N +R + K E A +Y M+ P+ TY L
Sbjct: 1065 PNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 108/238 (45%), Gaps = 6/238 (2%)
Query: 340 CKAGMITEAVDLFE-FMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGC 398
CK ++ A LFE F + G P TY ++I L + D +E + + S+GC
Sbjct: 760 CKHNNVSGARTLFEKFTKDLGV---QPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGC 816
Query: 399 LPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALK 458
+PDV TY +++ GKIDE ++ +EM + +T+N + L ++AL
Sbjct: 817 IPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALD 876
Query: 459 LYGRMIELRCI-PSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGL 517
LY ++ R P+ TY LI + A + ++ M GC + Y ++I G
Sbjct: 877 LYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGF 936
Query: 518 FNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDL-HAIHKLSDHMRKFYNP 574
+ + AC+L + ++ +G++ K + + L +G + +H + NP
Sbjct: 937 GKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNP 994
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 111/265 (41%), Gaps = 43/265 (16%)
Query: 177 NQENYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYT 236
+ ++S C Y ++D LS + + ++ MLDY R
Sbjct: 883 SDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCR------------------- 923
Query: 237 EKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAE 295
P +N+L++ K + A L+K+M ++ + + +
Sbjct: 924 ---------------------PNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLK 962
Query: 296 TYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFM 355
TY++LV C V G+ +E+ + G PD YN ++ K+ + EA+ LF M
Sbjct: 963 TYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEM 1022
Query: 356 RTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLC 415
+T S +P TY +I+ L +EE K+ + +G P+V T+ +I G L
Sbjct: 1023 KT--SRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLS 1080
Query: 416 GKIDEAYKFLEEMGNKGYPPDIVTY 440
GK + AY + M G+ P+ TY
Sbjct: 1081 GKPEHAYAVYQTMVTGGFSPNTGTY 1105
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 80/172 (46%)
Query: 366 TAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFL 425
T +T M+ L + ++EE + M D TY I + + + G + +A L
Sbjct: 117 TTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYAL 176
Query: 426 EEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEM 485
+M G+ + +YN + +L ++ EA+++Y RMI PS+QTY+ L+ +
Sbjct: 177 RKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKR 236
Query: 486 DDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKG 537
D D +EME G + T+ + I L K EA +L+ + ++G
Sbjct: 237 RDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEG 288
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/435 (22%), Positives = 187/435 (42%), Gaps = 58/435 (13%)
Query: 128 MMDNLHGFNNLEKALDQLA------IPLSTPLVTGVLHRLRYDEKIAFRFFTWA------ 175
++D + + LE D +A L+ ++ LR + ++AF F W
Sbjct: 94 LIDLIRQVSELESEADAMASLEDSSFDLNHDSFYSLIWELRDEWRLAFLAFKWGEKRGCD 153
Query: 176 ------------GNQENYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTV 223
GN + ++ C DM ++ T+ + + M+D N ++
Sbjct: 154 DQKSCDLMIWVLGNHQKFNIAWCLIRDMFNVSKDTR------KAMFLMMDRYAAANDTSQ 207
Query: 224 PVEVLMTILRKYTEKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLY 283
+ I+ K+ K P AF LL ALC+ +E AE
Sbjct: 208 AIRTF-DIMDKF-------------------KHTPYDEAFQGLLCALCRHGHIEKAEEFM 247
Query: 284 KKMRKIINTNAETYNILVFGWCRVRSP-TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKA 342
+K+ + E +N+++ GWC + + T ++ EM P+ +Y+ + + K
Sbjct: 248 LASKKLFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKV 307
Query: 343 GMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDV 402
G + +++ L++ M+ +G +P + Y ++ L + D +E KLM + G PD
Sbjct: 308 GNLFDSLRLYDEMKKRG---LAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDS 364
Query: 403 TTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGR 462
TY +I +C GK+D A L M ++ P + T++ FL + E+ L++ G+
Sbjct: 365 VTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAV----NFEKTLEVLGQ 420
Query: 463 MIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNK 522
M P+ +T+ +++ F+ P+ A + W EM++ + Y I+GL +C
Sbjct: 421 MKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGW 480
Query: 523 TEEACSLLEEVINKG 537
E+A + E+ +KG
Sbjct: 481 LEKAREIYSEMKSKG 495
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 146/291 (50%), Gaps = 10/291 (3%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSP 310
I++ P++ + +L+D L K L+ +A KM + I N +N L+ GWCR+
Sbjct: 453 IKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRF 512
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTAL------DTYCKAGMITEAVDLFEFMRTKGSTISS 364
+K+ M G +PD T+ T + D +CK T + LF+ M+ + IS+
Sbjct: 513 DEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQR--NKISA 570
Query: 365 PTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKF 424
A ++I L + R+E+ K +I PD+ TY +I G C ++DEA +
Sbjct: 571 DIA-VCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERI 629
Query: 425 LEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFE 484
E + + P+ VT + VLC N + A++++ M E P+ TY L+ F +
Sbjct: 630 FELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSK 689
Query: 485 MDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVIN 535
D +G+F+ ++EM+++G + +Y ++I+GL + +EA ++ + I+
Sbjct: 690 SVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAID 740
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 121/254 (47%), Gaps = 4/254 (1%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKL 316
P + F L++ CK ++ A L+K M ++ I + Y+ L+ G+ + G KL
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
+ + G + D +++ +D Y K+G + A +++ M +G SP TY I+I
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGI---SPNVVTYTILIKG 400
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
L Q+ R+ E F + G ++ G P + TY +I+G C CG + + E+M GYPPD
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPD 460
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQ 496
+V Y + L A++ +M+ +V +N LI + ++ D A + ++
Sbjct: 461 VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFR 520
Query: 497 EMEKRGCNLDTDTY 510
M G D T+
Sbjct: 521 LMGIYGIKPDVATF 534
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 113/257 (43%), Gaps = 10/257 (3%)
Query: 257 QPEINAFNLLL------DALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRS 309
+P++ F ++ DA CK L+ M R I+ + N+++ +
Sbjct: 528 KPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHR 587
Query: 310 PTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKT 369
K +I+ PD TYNT + YC + EA +FE ++ T P T
Sbjct: 588 IEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKV---TPFGPNTVT 644
Query: 370 YAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMG 429
I+I L +N+ M+ ++ M G P+ TY +++ I+ ++K EEM
Sbjct: 645 LTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQ 704
Query: 430 NKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPD 489
KG P IV+Y+ + LC + +EA ++ + I+ + +P V Y +LI + ++
Sbjct: 705 EKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLV 764
Query: 490 GAFETWQEMEKRGCNLD 506
A ++ M + G D
Sbjct: 765 EAALLYEHMLRNGVKPD 781
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 108/235 (45%), Gaps = 3/235 (1%)
Query: 315 KLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMI 374
+LL ++ G P+ T+ T ++ +CK G + A DLF+ M +G P Y+ +I
Sbjct: 272 RLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGI---EPDLIAYSTLI 328
Query: 375 VTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYP 434
+ + KL + G DV + I+ G + A + M +G
Sbjct: 329 DGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGIS 388
Query: 435 PDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFET 494
P++VTY ++ LC + + EA +YG++++ PS+ TY+ LI F + + F
Sbjct: 389 PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFAL 448
Query: 495 WQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFL 549
+++M K G D Y V+++GL A +++ + I+L F+S +
Sbjct: 449 YEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLI 503
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 138/354 (38%), Gaps = 45/354 (12%)
Query: 259 EINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMKLL 317
++ F+ +D K + A +YK+M + I+ N TY IL+ G C+ +
Sbjct: 355 DVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMY 414
Query: 318 EEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTL 377
++++ G P TY++ +D +CK G + L+E M G P Y +++ L
Sbjct: 415 GQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY---PPDVVIYGVLVDGL 471
Query: 378 AQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDI 437
++ M + M+ +V + +I+G C + DEA K MG G PD+
Sbjct: 472 SKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDV 531
Query: 438 VTYNCFLRV------LCDNKKS-----------------------------------EEA 456
T+ +RV C + K E+A
Sbjct: 532 ATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDA 591
Query: 457 LKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEG 516
K + +IE + P + TYN +I + + D A ++ ++ +T T ++I
Sbjct: 592 SKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHV 651
Query: 517 LFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMRK 570
L N + A + + KG K + + S D+ KL + M++
Sbjct: 652 LCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQE 705
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 105/220 (47%), Gaps = 5/220 (2%)
Query: 340 CKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCL 399
C+ GM+ +A+++F + G I P Y M+ +L +DR++ + G
Sbjct: 157 CRYGMVDKALEIFVYSTQLGVVI--PQDSVYR-MLNSLIGSDRVDLIADHFDKLCRGGIE 213
Query: 400 PD-VTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALK 458
P V+ + +++ + G++ +A F + +G+ IV+ N L+ L ++ E A +
Sbjct: 214 PSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQ-IEVASR 272
Query: 459 LYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLF 518
L +++ P+V T+ LI+ F + + D AF+ ++ ME+RG D Y +I+G F
Sbjct: 273 LLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYF 332
Query: 519 NCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDL 558
L + ++KG+KL F S + GDL
Sbjct: 333 KAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDL 372
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/268 (19%), Positives = 117/268 (43%), Gaps = 7/268 (2%)
Query: 317 LEEMIQLGHRPDNFT-YNTALDT-YCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMI 374
+++ + G P + + LD +CK G +T+A+D + +G + + +
Sbjct: 204 FDKLCRGGIEPSGVSAHGFVLDALFCK-GEVTKALDFHRLVMERGFRVGIVSCNK----V 258
Query: 375 VTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYP 434
+ D++E +L+ ++ G P+V T+ +I G C G++D A+ + M +G
Sbjct: 259 LKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIE 318
Query: 435 PDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFET 494
PD++ Y+ + KL+ + + V ++ I ++ + D A
Sbjct: 319 PDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVV 378
Query: 495 WQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSD 554
++ M +G + + TY ++I+GL + EA + +++ +G++ + S +
Sbjct: 379 YKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCK 438
Query: 555 LGDLHAIHKLSDHMRKFYNPAMARRYAI 582
G+L + L + M K P Y +
Sbjct: 439 CGNLRSGFALYEDMIKMGYPPDVVIYGV 466
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 187/423 (44%), Gaps = 19/423 (4%)
Query: 121 VDKVCNTMMDNLHGFNNLEKALDQLAIPLSTPLVTGVLHRLRYDEKIAFRFFTWAGNQEN 180
++ V N + +H E++L+ L +P+++ V VL + RFF WA + +
Sbjct: 51 INHVVNIVRREIHP----ERSLNSLRLPVTSEFVFRVLRATSRSSNDSLRFFNWARSNPS 106
Query: 181 YSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEKYL 240
Y+ Y ++ L+S K ++I+ M D + E L I+ +Y +
Sbjct: 107 YTPTSMEYEELAKSLASHKKYESMWKILKQMKDL-----SLDISGETLCFIIEQYGKN-- 159
Query: 241 THVQKFAKKKRIRVKT---QPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAET 296
HV + + KT Q ++ +N LL ALC + A L ++M RK + + T
Sbjct: 160 GHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRT 219
Query: 297 YNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMR 356
Y ILV GWC + L+EM + G P + ++ AG + A ++ M
Sbjct: 220 YAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKM- 278
Query: 357 TKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCG 416
TKG + P +T+ I+I ++++ +E C ++ G D+ TYK +I V G
Sbjct: 279 TKGGFV--PDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIG 336
Query: 417 KIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYN 476
KIDEA++ L G+ P Y ++ +C N ++A + M P+ Y
Sbjct: 337 KIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYT 396
Query: 477 MLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLE-EVIN 535
MLI+M A EM + G + + ++ +GL N K + A + + EV
Sbjct: 397 MLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMRIEQLEVQL 456
Query: 536 KGI 538
+G+
Sbjct: 457 RGV 459
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 4/226 (1%)
Query: 315 KLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFM-RTKGSTISSPTAKTYAIM 373
K+L++M L T ++ Y K G + +AV+LF + +T G T Y +
Sbjct: 132 KILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGC---QQTVDVYNSL 188
Query: 374 IVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGY 433
+ L + L+ MI G PD TY ++ G C GK+ EA +FL+EM +G+
Sbjct: 189 LHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGF 248
Query: 434 PPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFE 493
P + + L + E A ++ +M + +P +QT+N+LI + + + E
Sbjct: 249 NPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIE 308
Query: 494 TWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
+ K G +D DTY +I + K +EA LL + G K
Sbjct: 309 MYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHK 354
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 77/200 (38%), Gaps = 1/200 (0%)
Query: 366 TAKTYAIMIVTLAQNDRMEECFKLM-GYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKF 424
+ +T +I +N +++ +L G + GC V Y ++ +C AY
Sbjct: 145 SGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYAL 204
Query: 425 LEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFE 484
+ M KG PD TY + C K +EA + M P + ++LI
Sbjct: 205 IRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLN 264
Query: 485 MDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKK 544
+ A E +M K G D T+ ++IE + + E + G+ +
Sbjct: 265 AGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDT 324
Query: 545 FDSFLIQLSDLGDLHAIHKL 564
+ + + +S +G + +L
Sbjct: 325 YKTLIPAVSKIGKIDEAFRL 344
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 76/172 (44%), Gaps = 1/172 (0%)
Query: 400 PDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKL 459
P Y+++ + + K + +K L++M + T + N ++A++L
Sbjct: 109 PTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVEL 168
Query: 460 Y-GRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLF 518
+ G L C +V YN L+ ++ GA+ + M ++G D TY +++ G
Sbjct: 169 FNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWC 228
Query: 519 NCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMRK 570
+ K +EA L+E+ +G P + D + L + G L + ++ M K
Sbjct: 229 SAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTK 280
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 135/283 (47%), Gaps = 4/283 (1%)
Query: 258 PEINAFNLLLDALCKCCLVEYA-EGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKL 316
P + +N +++ LCK + A E Y +K I +A TYN L+ G T +L
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
L +M++ P+ + +DT+ K G + EA +L++ M + P TY +I
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVV---PNVFTYNSLING 298
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
+ + + + M+S GC PDV TY +I G C ++++ K EM +G D
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 358
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQ 496
TYN + C K A K++ RM++ P + TYN+L+ + A +
Sbjct: 359 AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 418
Query: 497 EMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
+++K ++D TY ++I+GL +K +EA L + KG+K
Sbjct: 419 DLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVK 461
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 149/335 (44%), Gaps = 9/335 (2%)
Query: 205 FRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEKYLTHVQKFAKKKRIRVKTQPEINAFN 264
F + C+ML R S V ++T++ K K+ + + K + + + ++ +F
Sbjct: 64 FSLFCEMLQ--SRPIPSIVDFTRVLTVIAK-MNKFDIVIYLYHKMENLGI--SHDLYSFT 118
Query: 265 LLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKLLEEMIQL 323
+L+ C+C + A L KM K+ + T L+ G+C+ + L++ M
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 324 GHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRM 383
G P+ YNT ++ CK + A+++F M KG A TY +I L+ + R
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGI---RADAVTYNTLISGLSNSGRW 235
Query: 384 EECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCF 443
+ +L+ M+ P+V + +I+ G + EA +EM + P++ TYN
Sbjct: 236 TDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSL 295
Query: 444 LRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGC 503
+ C + +A ++ M+ C P V TYN LI+ F + + + + EM +G
Sbjct: 296 INGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGL 355
Query: 504 NLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGI 538
D TY +I G K A + +++ G+
Sbjct: 356 VGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGV 390
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 87/189 (46%), Gaps = 4/189 (2%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMKL 316
P++ +N L+ CK VE L+ +M + + +A TYN L+ G+C+ K+
Sbjct: 322 PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 381
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
M+ G PD TYN LD C G I +A+ + E ++ + TY I+I
Sbjct: 382 FNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVD---IITYNIIIQG 438
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
L + D+++E + L + G PD Y +I G+C G EA K M G+ P
Sbjct: 439 LCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPS 498
Query: 437 IVTYNCFLR 445
Y+ LR
Sbjct: 499 ERIYDETLR 507
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 147/310 (47%), Gaps = 5/310 (1%)
Query: 259 EINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKLL 317
++ +F L+D C+C + A KM K+ + T+ LV G+C V M L+
Sbjct: 113 DLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLV 172
Query: 318 EEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTL 377
++++ LG+ P+ YNT +D+ C+ G + A+D+ + M+ G P TY +I L
Sbjct: 173 DQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMG---IRPDVVTYNSLITRL 229
Query: 378 AQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDI 437
+ +++ M+ G PDV T+ +I+ G++ EA K EM + P+I
Sbjct: 230 FHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNI 289
Query: 438 VTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQE 497
VTYN + LC + +EA K+ ++ P+ TYN LI+ + + D +
Sbjct: 290 VTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCV 349
Query: 498 MEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGD 557
M + G + DT TY + +G K A +L +++ G+ F+ L L D G
Sbjct: 350 MSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGK 409
Query: 558 L-HAIHKLSD 566
+ A+ +L D
Sbjct: 410 IGKALVRLED 419
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 154/335 (45%), Gaps = 9/335 (2%)
Query: 242 HVQKFAKK-----KRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAE 295
HV +F + + + + +P + +N ++D+LC+ V A + K M+K+ I +
Sbjct: 161 HVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVV 220
Query: 296 TYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFM 355
TYN L+ + ++L +M+++G PD T++ +D Y K G + EA + M
Sbjct: 221 TYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEM 280
Query: 356 RTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLC 415
+ +P TY +I L + ++E K++ ++S G P+ TY +I G C
Sbjct: 281 IQRSV---NPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKA 337
Query: 416 GKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTY 475
++D+ K L M G D TYN + C K A K+ GRM+ P + T+
Sbjct: 338 KRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTF 397
Query: 476 NMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVIN 535
N+L+ + A ++++K + TY ++I+GL +K E+A L +
Sbjct: 398 NILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLAL 457
Query: 536 KGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMRK 570
KG+ + + +I L H+L M+K
Sbjct: 458 KGVSPDVITYITMMIGLRRKRLWREAHELYRKMQK 492
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 104/224 (46%), Gaps = 3/224 (1%)
Query: 314 MKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIM 373
+ L + LG D +++ T +D +C+ ++ A+ M G P+ T+ +
Sbjct: 99 ISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGF---EPSIVTFGSL 155
Query: 374 IVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGY 433
+ +R E L+ ++ G P+V Y II+ +C G+++ A L+ M G
Sbjct: 156 VNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGI 215
Query: 434 PPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFE 493
PD+VTYN + L + + ++ M+ + P V T++ LI ++ + A +
Sbjct: 216 RPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKK 275
Query: 494 TWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKG 537
+ EM +R N + TY +I GL +EA +L +++KG
Sbjct: 276 QYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKG 319
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 86/199 (43%), Gaps = 7/199 (3%)
Query: 382 RMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYN 441
R+ +G M+ G P + T+ ++ G C + EA ++++ GY P++V YN
Sbjct: 129 RLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYN 188
Query: 442 CFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKR 501
+ LC+ + AL + M ++ P V TYN LI+ F + +M +
Sbjct: 189 TIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRM 248
Query: 502 GCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAI 561
G + D T+ +I+ + EA E+I + + ++S + L I
Sbjct: 249 GISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGL-------CI 301
Query: 562 HKLSDHMRKFYNPAMARRY 580
H L D +K N +++ +
Sbjct: 302 HGLLDEAKKVLNVLVSKGF 320
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 96/211 (45%), Gaps = 1/211 (0%)
Query: 365 PTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKF 424
P+ ++ +++ +A+ ++ E L ++ G D+ ++ +I+ C C ++ A
Sbjct: 77 PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSC 136
Query: 425 LEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFE 484
L +M G+ P IVT+ + C + EA+ L +++ L P+V YN +I E
Sbjct: 137 LGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 196
Query: 485 MDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKK 544
+ A + + M+K G D TY +I LF+ + +L +++ GI
Sbjct: 197 KGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVIT 256
Query: 545 FDSFLIQLSDLGD-LHAIHKLSDHMRKFYNP 574
F + + G L A + ++ +++ NP
Sbjct: 257 FSALIDVYGKEGQLLEAKKQYNEMIQRSVNP 287
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 143/315 (45%), Gaps = 4/315 (1%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMK 315
+P + +N L+D LCK + A L +M +K + + TYN L+ G C + +
Sbjct: 173 EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
+L +M++ PD T+ +D + K G + EA +L++ M P TY +I
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSV---DPNNVTYNSIIN 289
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
L + R+ + K M S GC P+V TY +I G C +DE K + M +G+
Sbjct: 290 GLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNA 349
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
DI TYN + C K AL ++ M+ R P + T+ +L+ + + A +
Sbjct: 350 DIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKF 409
Query: 496 QEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDL 555
+M + + Y +MI GL +K E+A L + +G+K + + ++ L
Sbjct: 410 DDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKN 469
Query: 556 GDLHAIHKLSDHMRK 570
G +L M++
Sbjct: 470 GPRREADELIRRMKE 484
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 125/269 (46%), Gaps = 4/269 (1%)
Query: 259 EINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKLL 317
++ +F +L+ C+C + +A + KM K+ + T+ L+ G+C V L+
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 318 EEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTL 377
M++ G+ P+ YNT +D CK G + A++L M KG TY ++ L
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKG---LGADVVTYNTLLTGL 221
Query: 378 AQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDI 437
+ R + +++ M+ PDV T+ +I+ G +DEA + +EM P+
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281
Query: 438 VTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQE 497
VTYN + LC + + +A K + M C P+V TYN LIS F + D + +Q
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341
Query: 498 MEKRGCNLDTDTYCVMIEGLFNCNKTEEA 526
M G N D TY +I G K A
Sbjct: 342 MSCEGFNADIFTYNTLIHGYCQVGKLRVA 370
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 127/282 (45%), Gaps = 4/282 (1%)
Query: 258 PEINAFNLLLDALCKCC-LVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKL 316
++ +N LL LC + A L M++ IN + T+ L+ + + + +L
Sbjct: 209 ADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQEL 268
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
+EMIQ P+N TYN+ ++ C G + +A F+ M +KG P TY +I
Sbjct: 269 YKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCF---PNVVTYNTLISG 325
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
+ ++E KL M G D+ TY +I G C GK+ A M ++ PD
Sbjct: 326 FCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPD 385
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQ 496
I+T+ L LC N + E AL + M E + YN++I + D + A+E +
Sbjct: 386 IITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFC 445
Query: 497 EMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGI 538
+ G D TY +MI GL EA L+ + +GI
Sbjct: 446 RLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 119/271 (43%), Gaps = 3/271 (1%)
Query: 290 INTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAV 349
I+ + ++ IL+ +CR + + +L +M++LG+ P T+ + L +C I +A
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 350 DLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDII 409
L M G P Y +I L +N + +L+ M G DV TY ++
Sbjct: 162 SLVILMVKSG---YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLL 218
Query: 410 EGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCI 469
G+C G+ +A + L +M + PD+VT+ + V +EA +LY MI+
Sbjct: 219 TGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVD 278
Query: 470 PSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSL 529
P+ TYN +I+ A +T+ M +GC + TY +I G +E L
Sbjct: 279 PNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKL 338
Query: 530 LEEVINKGIKLPYKKFDSFLIQLSDLGDLHA 560
+ + +G +++ + +G L
Sbjct: 339 FQRMSCEGFNADIFTYNTLIHGYCQVGKLRV 369
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 84/204 (41%)
Query: 365 PTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKF 424
P+ + ++ A R E M G D+ ++ +I C C ++ A
Sbjct: 69 PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128
Query: 425 LEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFE 484
L +M GY P IVT+ L C + +A L M++ P+V YN LI +
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCK 188
Query: 485 MDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKK 544
+ + A E EMEK+G D TY ++ GL + +A +L +++ + I
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT 248
Query: 545 FDSFLIQLSDLGDLHAIHKLSDHM 568
F + + G+L +L M
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEM 272
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 82/194 (42%), Gaps = 1/194 (0%)
Query: 382 RMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYN 441
R E+ F L M+ S LP + + ++ + + F ++M G D+ ++
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 442 CFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKR 501
+ C + AL + G+M++L PS+ T+ L+ F ++ AF M K
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 502 GCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLH-A 560
G + Y +I+GL + A LL E+ KG+ +++ L L G A
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 561 IHKLSDHMRKFYNP 574
L D M++ NP
Sbjct: 231 ARMLRDMMKRSINP 244
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 173/401 (43%), Gaps = 20/401 (4%)
Query: 139 EKALDQLAIPLSTPLVTGVLHRLRYDEKIAFRFFTWAGNQENYSHEPCAYNDMMDILSST 198
E+++ +++ P TP L L D + A F W N+ H +Y ++ +L S
Sbjct: 14 EQSISKISYPFYTPSHVSSLFSLNLDPQTALSFSDWISRIPNFKHNVTSYASLVTLLCSQ 73
Query: 199 KYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEKYLTHVQKFAKKKRIRVKTQP 258
+ + +I M+ + V+ T +RK I+ K P
Sbjct: 74 EIPYEVPKITILMIKSCNSVRDALFVVDFCRT-MRK------------GDSFEIKYKLTP 120
Query: 259 EINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKLL 317
+ +N LL +L + LVE + LY +M +++ + T+N LV G+C++ + +
Sbjct: 121 K--CYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYV 178
Query: 318 EEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTL 377
+IQ G PD FTY + + +C+ + A +F+ M G +Y +I L
Sbjct: 179 TWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNG---CHRNEVSYTQLIYGL 235
Query: 378 AQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDI 437
+ +++E L+ M C P+V TY +I+ +C G+ EA ++M G PD
Sbjct: 236 FEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDD 295
Query: 438 VTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQE 497
Y ++ C +EA L M+E +P+V TYN LI F + + A +
Sbjct: 296 CMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSK 354
Query: 498 MEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGI 538
M ++ D TY +I G + + A LL + G+
Sbjct: 355 MLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGL 395
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 107/230 (46%), Gaps = 7/230 (3%)
Query: 345 ITEAVDLFEFMRT--KGSTIS---SPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCL 399
+ +A+ + +F RT KG + T K Y ++ +LA+ +EE +L M+
Sbjct: 93 VRDALFVVDFCRTMRKGDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVS 152
Query: 400 PDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKL 459
PD+ T+ ++ G C G + EA +++ + G PD TY F+ C K+ + A K+
Sbjct: 153 PDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKV 212
Query: 460 YGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFN 519
+ M + C + +Y LI FE D A +M+ C + TY V+I+ L
Sbjct: 213 FKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCG 272
Query: 520 CNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGD-LHAIHKLSDHM 568
+ EA +L +++ GIK P + LIQ GD L L +HM
Sbjct: 273 SGQKSEAMNLFKQMSESGIK-PDDCMYTVLIQSFCSGDTLDEASGLLEHM 321
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 4/144 (2%)
Query: 293 NAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLF 352
N TY +L+ C + M L ++M + G +PD+ Y + ++C + EA L
Sbjct: 259 NVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLL 318
Query: 353 EFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGV 412
E M G P TY +I + + + + L+ M+ +PD+ TY +I G
Sbjct: 319 EHMLENGLM---PNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLVPDLITYNTLIAGQ 374
Query: 413 CLCGKIDEAYKFLEEMGNKGYPPD 436
C G +D AY+ L M G P+
Sbjct: 375 CSSGNLDSAYRLLSLMEESGLVPN 398
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 138/295 (46%), Gaps = 5/295 (1%)
Query: 256 TQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGM 314
QP F+ LL + + K+M+ I + + + YN+++ + + M
Sbjct: 405 VQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAM 464
Query: 315 KLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMI 374
+ M+ G PD T+NT +D +CK G A ++FE M +G P A TY IMI
Sbjct: 465 TTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCL---PCATTYNIMI 521
Query: 375 VTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYP 434
+ +R ++ +L+G M S G LP+V T+ +++ G+ ++A + LEEM + G
Sbjct: 522 NSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLK 581
Query: 435 PDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFET 494
P YN + SE+A+ + M PS+ N LI+ F E AF
Sbjct: 582 PSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAV 641
Query: 495 WQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFL 549
Q M++ G D TY +++ L +K ++ + EE+I G K P +K S L
Sbjct: 642 LQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCK-PDRKARSML 695
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 121/275 (44%), Gaps = 4/275 (1%)
Query: 266 LLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLG 324
++ AL AE L++++R+ I YN L+ G+ + ++ EM + G
Sbjct: 310 IISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRG 369
Query: 325 HRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRME 384
PD TY+ +D Y AG A + + M P + ++ ++ +
Sbjct: 370 VSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGD---VQPNSFVFSRLLAGFRDRGEWQ 426
Query: 385 ECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFL 444
+ F+++ M S G PD Y +I+ +D A + M ++G PD VT+N +
Sbjct: 427 KTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLI 486
Query: 445 RVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCN 504
C + + A +++ M C+P TYN++I+ + + + D +M+ +G
Sbjct: 487 DCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGIL 546
Query: 505 LDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
+ T+ +++ + +A LEE+ + G+K
Sbjct: 547 PNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLK 581
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 126/284 (44%), Gaps = 4/284 (1%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMK 315
+P A+N LL K ++ AE + +M K ++ + TY++L+ +
Sbjct: 336 KPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARI 395
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
+L+EM +P++F ++ L + G E F+ ++ S P + Y ++I
Sbjct: 396 VLKEMEAGDVQPNSFVFSRLLAGFRDRG---EWQKTFQVLKEMKSIGVKPDRQFYNVVID 452
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
T + + ++ M+S G PD T+ +I+ C G+ A + E M +G P
Sbjct: 453 TFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLP 512
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
TYN + D ++ ++ +L G+M +P+V T+ L+ ++ + + A E
Sbjct: 513 CATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECL 572
Query: 496 QEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
+EM+ G + Y +I +E+A + + + G+K
Sbjct: 573 EEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLK 616
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 100/225 (44%), Gaps = 4/225 (1%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMK 315
+P+ +N L+D CK AE +++ M R+ A TYNI++ + +
Sbjct: 476 EPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKR 535
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
LL +M G P+ T+ T +D Y K+G +A++ E M++ G P++ Y +I
Sbjct: 536 LLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGL---KPSSTMYNALIN 592
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
AQ E+ M S G P + +I + EA+ L+ M G P
Sbjct: 593 AYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKP 652
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLIS 480
D+VTY ++ L K ++ +Y MI C P + +ML S
Sbjct: 653 DVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRS 697
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 103/254 (40%), Gaps = 13/254 (5%)
Query: 330 FTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKL 389
TYN + + I +A++L MR G Y+++I +L ++++++ L
Sbjct: 198 LTYNALIGACARNNDIEKALNLIAKMRQDGY---QSDFVNYSLVIQSLTRSNKIDSVMLL 254
Query: 390 MGYM-ISSGCLP-DVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVL 447
Y I L DV DII G G +A + L G T + L
Sbjct: 255 RLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISAL 314
Query: 448 CDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDT 507
D+ ++ EA L+ + + P + YN L+ + + A EMEKRG + D
Sbjct: 315 ADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDE 374
Query: 508 DTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDH 567
TY ++I+ N + E A +L+E+ ++ F L D G+ ++
Sbjct: 375 HTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKE 434
Query: 568 M--------RKFYN 573
M R+FYN
Sbjct: 435 MKSIGVKPDRQFYN 448
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 148/323 (45%), Gaps = 5/323 (1%)
Query: 250 KRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVR 308
K +++ P I N LL+ C + A L +M ++ + T+ LV G +
Sbjct: 135 KMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHN 194
Query: 309 SPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAK 368
+ + L+E M+ G +PD TY ++ CK G A++L M KG
Sbjct: 195 KASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKME-KGKI--EADVV 251
Query: 369 TYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEM 428
Y +I L + M++ F L M + G PDV TY +I +C G+ +A + L +M
Sbjct: 252 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM 311
Query: 429 GNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELR-CIPSVQTYNMLISMFFEMDD 487
K PD+V +N + K EA KLY M++ + C P V YN LI F +
Sbjct: 312 LEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKR 371
Query: 488 PDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDS 547
+ E ++EM +RG +T TY +I G F + A + +++++ G+ ++
Sbjct: 372 VEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNI 431
Query: 548 FLIQLSDLGDLHAIHKLSDHMRK 570
L L + G++ + ++M+K
Sbjct: 432 LLDGLCNNGNVETALVVFEYMQK 454
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 141/307 (45%), Gaps = 5/307 (1%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSP 310
+ + QP+ F L+ L + A L ++M K + TY ++ G C+ P
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
+ LL +M + D YNT +D CK + +A DLF M TKG P TY
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGI---KPDVFTY 288
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEM-G 429
+I L R + +L+ M+ PD+ + +I+ GK+ EA K +EM
Sbjct: 289 NPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK 348
Query: 430 NKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPD 489
+K PD+V YN ++ C K+ EE ++++ M + + + TY LI FF+ D D
Sbjct: 349 SKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCD 408
Query: 490 GAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFL 549
A +++M G + D TY ++++GL N E A + E + + +KL + + +
Sbjct: 409 NAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMI 468
Query: 550 IQLSDLG 556
L G
Sbjct: 469 EALCKAG 475
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 134/299 (44%), Gaps = 6/299 (2%)
Query: 244 QKFAKKKRIRVKT-QPEINAFNLLLDALCKCCLVEYAEGLYKKMRK-IINTNAETYNILV 301
+ A +R+ VK QP++ + +++ LCK + A L KM K I + YN ++
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTII 257
Query: 302 FGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGST 361
G C+ + L +M G +PD FTYN + C G ++A L M K
Sbjct: 258 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNI- 316
Query: 362 ISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSG-CLPDVTTYKDIIEGVCLCGKIDE 420
+P + +I + ++ E KL M+ S C PDV Y +I+G C +++E
Sbjct: 317 --NPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEE 374
Query: 421 AYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLIS 480
+ EM +G + VTY + + + A ++ +M+ P + TYN+L+
Sbjct: 375 GMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLD 434
Query: 481 MFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
+ + A ++ M+KR LD TY MIE L K E+ L + KG+K
Sbjct: 435 GLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVK 493
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 116/256 (45%), Gaps = 5/256 (1%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMRKIIN--TNAETYNILVFGWCRVRSPTRGM 314
P++ FN L+DA K + AE LY +M K + + YN L+ G+C+ + GM
Sbjct: 317 NPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGM 376
Query: 315 KLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMI 374
++ EM Q G + TY T + + +A A +F+ M + G P TY I++
Sbjct: 377 EVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV---HPDIMTYNILL 433
Query: 375 VTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYP 434
L N +E + YM D+ TY +IE +C GK+++ + + KG
Sbjct: 434 DGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVK 493
Query: 435 PDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFET 494
P++VTY + C EEA L+ M E +P+ TYN LI D + E
Sbjct: 494 PNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAEL 553
Query: 495 WQEMEKRGCNLDTDTY 510
+EM G D T+
Sbjct: 554 IKEMRSCGFAGDASTF 569
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 140/320 (43%), Gaps = 39/320 (12%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSP 310
++ + P I F+ LL A+ K + L ++M+ + I+ N TY+I + +CR
Sbjct: 67 VKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQL 126
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
+ + +L +M++LG+ P T N+ L+ +C I+EA
Sbjct: 127 SLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA---------------------- 164
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGN 430
+A D+M E MGY PD T+ ++ G+ K EA +E M
Sbjct: 165 ------VALVDQMVE----MGYQ------PDTVTFTTLVHGLFQHNKASEAVALVERMVV 208
Query: 431 KGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDG 490
KG PD+VTY + LC + + AL L +M + + V YN +I + D
Sbjct: 209 KGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDD 268
Query: 491 AFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLI 550
AF+ + +ME +G D TY +I L N + +A LL +++ K I F++ +
Sbjct: 269 AFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALID 328
Query: 551 QLSDLGDLHAIHKLSDHMRK 570
G L KL D M K
Sbjct: 329 AFVKEGKLVEAEKLYDEMVK 348
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 141/318 (44%), Gaps = 7/318 (2%)
Query: 255 KTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRG 313
K + ++ +N ++D LCK ++ A L+ KM K I + TYN L+ C +
Sbjct: 245 KIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDA 304
Query: 314 MKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIM 373
+LL +M++ PD +N +D + K G + EA L++ M S P Y +
Sbjct: 305 SRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK--SKHCFPDVVAYNTL 362
Query: 374 IVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGY 433
I + R+EE ++ M G + + TY +I G D A ++M + G
Sbjct: 363 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 422
Query: 434 PPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFE 493
PDI+TYN L LC+N E AL ++ M + + TY +I + + ++
Sbjct: 423 HPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWD 482
Query: 494 TWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLI--Q 551
+ + +G + TY M+ G EEA +L E+ G LP + LI +
Sbjct: 483 LFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDG-PLPNSGTYNTLIRAR 541
Query: 552 LSDLGDLHAIHKLSDHMR 569
L D GD A +L MR
Sbjct: 542 LRD-GDEAASAELIKEMR 558
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 149/356 (41%), Gaps = 15/356 (4%)
Query: 132 LHGFNNLEKALDQLAIPLSTPLVTGVLHRLRYDEKIAFRFFTWAGNQENYSHEP--CAYN 189
L+ N +EK + + + ++ G+ D+ AF F E +P YN
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDD--AFDLFN---KMETKGIKPDVFTYN 289
Query: 190 DMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEKYLTHVQKFAKK 249
++ L + R++ DML+ K N V L+ K E L +K +
Sbjct: 290 PLISCLCNYGRWSDASRLLSDMLE--KNINPDLVFFNALIDAFVK--EGKLVEAEKLYDE 345
Query: 250 KRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVR 308
P++ A+N L+ CK VE ++++M ++ + N TY L+ G+ + R
Sbjct: 346 MVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQAR 405
Query: 309 SPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAK 368
+ ++M+ G PD TYN LD C G + A+ +FE+M+ + +
Sbjct: 406 DCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLD---IV 462
Query: 369 TYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEM 428
TY MI L + ++E+ + L + G P+V TY ++ G C G +EA EM
Sbjct: 463 TYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEM 522
Query: 429 GNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFE 484
G P+ TYN +R + + +L M T+ ++ +M +
Sbjct: 523 KEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHD 578
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 115/266 (43%), Gaps = 4/266 (1%)
Query: 313 GMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAI 372
+ L +M++ P ++ L K + L E M+ G S TY+I
Sbjct: 59 AIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGI---SHNLYTYSI 115
Query: 373 MIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKG 432
I + ++ ++G M+ G P + T ++ G C +I EA +++M G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 433 YPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAF 492
Y PD VT+ + L + K+ EA+ L RM+ C P + TY +I+ + +PD A
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 493 ETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQL 552
+MEK D Y +I+GL ++A L ++ KGIK ++ + L
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295
Query: 553 SDLGDL-HAIHKLSDHMRKFYNPAMA 577
+ G A LSD + K NP +
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLV 321
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 78/159 (49%)
Query: 379 QNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIV 438
Q+ ++++ L G M+ S P + + ++ + K D E+M N G ++
Sbjct: 52 QDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 111
Query: 439 TYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEM 498
TY+ F+ C + AL + G+M++L PS+ T N L++ F + A +M
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 499 EKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKG 537
+ G DT T+ ++ GLF NK EA +L+E ++ KG
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG 210
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 134/283 (47%), Gaps = 4/283 (1%)
Query: 256 TQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGM 314
++P + +N L+ LC+ A L + M ++ I N T+ L+ + +V
Sbjct: 219 SRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAK 278
Query: 315 KLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMI 374
+L MIQ+ PD FTY + ++ C G++ EA +F M G P Y +I
Sbjct: 279 ELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGC---YPNEVIYTTLI 335
Query: 375 VTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYP 434
++ R+E+ K+ M G + + TY +I+G CL G+ D A + +M ++ P
Sbjct: 336 HGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAP 395
Query: 435 PDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFET 494
PDI TYN L LC N K E+AL ++ M + ++ TY ++I ++ + AF+
Sbjct: 396 PDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDL 455
Query: 495 WQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKG 537
+ + +G + TY MI G EA SL +++ G
Sbjct: 456 FCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDG 498
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 131/283 (46%), Gaps = 4/283 (1%)
Query: 250 KRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVR 308
K +++ +P++ F LL+ C +E A L+ ++ + N TY L+ C+ R
Sbjct: 143 KMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNR 202
Query: 309 SPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAK 368
++L +M G RP+ TYN + C+ G +A L M + P
Sbjct: 203 HLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRI---EPNVI 259
Query: 369 TYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEM 428
T+ +I + ++ E +L MI PDV TY +I G+C+ G +DEA + M
Sbjct: 260 TFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM 319
Query: 429 GNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDP 488
G P+ V Y + C +K+ E+ +K++ M + + + TY +LI + + P
Sbjct: 320 ERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRP 379
Query: 489 DGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLE 531
D A E + +M R D TY V+++GL K E+A + E
Sbjct: 380 DVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFE 422
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 142/315 (45%), Gaps = 4/315 (1%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMK 315
+P + + L+ LCK + +A L+ +M N TYN LV G C +
Sbjct: 185 KPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAW 244
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
LL +M++ P+ T+ +D + K G + EA +L+ M P TY +I
Sbjct: 245 LLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV---YPDVFTYGSLIN 301
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
L ++E ++ M +GC P+ Y +I G C ++++ K EM KG
Sbjct: 302 GLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVA 361
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
+ +TY ++ C + + A +++ +M R P ++TYN+L+ + A +
Sbjct: 362 NTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIF 421
Query: 496 QEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDL 555
+ M KR +++ TY ++I+G+ K E+A L + +KG+K + + +
Sbjct: 422 EYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRR 481
Query: 556 GDLHAIHKLSDHMRK 570
G +H L M++
Sbjct: 482 GLIHEADSLFKKMKE 496
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 108/225 (48%), Gaps = 4/225 (1%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSP 310
I++ P++ + L++ LC L++ A ++ M R N Y L+ G+C+ +
Sbjct: 285 IQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRV 344
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
GMK+ EM Q G + TY + YC G A ++F M ++ + P +TY
Sbjct: 345 EDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRA---PPDIRTY 401
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGN 430
+++ L N ++E+ + YM ++ TY II+G+C GK+++A+ + +
Sbjct: 402 NVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFS 461
Query: 431 KGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTY 475
KG P+++TY + C EA L+ +M E +P+ Y
Sbjct: 462 KGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 98/228 (42%), Gaps = 7/228 (3%)
Query: 313 GMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAI 372
+ L M+ P + L K + LFE M+ G P T I
Sbjct: 67 ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGI---PPLLCTCNI 123
Query: 373 MI--VTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGN 430
++ V L+ CF +G M+ G PD+ T+ ++ G C +I++A +++
Sbjct: 124 VMHCVCLSSQPCRASCF--LGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILG 181
Query: 431 KGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDG 490
G+ P++VTY +R LC N+ A++L+ +M P+V TYN L++ E+
Sbjct: 182 MGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGD 241
Query: 491 AFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGI 538
A ++M KR + T+ +I+ K EA L +I +
Sbjct: 242 AAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 100/222 (45%), Gaps = 3/222 (1%)
Query: 347 EAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYK 406
+A+DLF M + P+ + ++ +A+ +R + L M G P + T
Sbjct: 66 DALDLFTRMV---HSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 407 DIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIEL 466
++ VCL + A FL +M G+ PD+VT+ L C + E+A+ L+ +++ +
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 467 RCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEA 526
P+V TY LI + + A E + +M G + TY ++ GL + +A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 527 CSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHM 568
LL +++ + I+ F + + +G L +L + M
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVM 284
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 69/182 (37%), Gaps = 33/182 (18%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKL 316
P + L+ CK VE ++ +M +K + N TY +L+ G+C V P ++
Sbjct: 326 PNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEV 385
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTIS------------- 363
+M PD TYN LD C G + +A+ +FE+MR + I+
Sbjct: 386 FNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCK 445
Query: 364 -------------------SPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTT 404
P TY MI + + E L M G LP+ +
Sbjct: 446 LGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESV 505
Query: 405 YK 406
YK
Sbjct: 506 YK 507
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/494 (22%), Positives = 203/494 (41%), Gaps = 52/494 (10%)
Query: 140 KALDQLAIPLSTPLVTGVLHRLRYDEKIAFRFFTWAGNQENYSHEPCAYNDMMDILSSTK 199
+AL L++ S L+ +L RLR + + F A Q+ + + AY M+ ILS +
Sbjct: 59 EALHDLSLDFSDELLNSILRRLRLNPEACLEIFNLASKQQKFRPDYKAYCKMVHILSRAR 118
Query: 200 YKVKQFRIVCDML-----------DYMKRKNKSTVPVEVLMTILRKYTEKYLT----HV- 243
+ +C+++ + ++ + + V IL+ Y EK L HV
Sbjct: 119 NYQQTKSYLCELVALNHSGFVVWGELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVF 178
Query: 244 --------------------------QKFAK----KKRIRVKTQPEINAFNLLLDALCKC 273
+ F + I + P++ +++++A C+
Sbjct: 179 DNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRS 238
Query: 274 CLVEYAEGLYKKMRKIINT--NAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFT 331
V+ A K+ + N TYN L+ G+ + ++L M + G + T
Sbjct: 239 GNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVT 298
Query: 332 YNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMG 391
Y + + YCK G++ EA +FE ++ K Y +++ + ++ + ++
Sbjct: 299 YTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQ---HMYGVLMDGYCRTGQIRDAVRVHD 355
Query: 392 YMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNK 451
MI G + T +I G C G++ EA + M + PD TYN + C
Sbjct: 356 NMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAG 415
Query: 452 KSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYC 511
+EALKL +M + +P+V TYN+L+ + + W+ M KRG N D +
Sbjct: 416 YVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCS 475
Query: 512 VMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMRKF 571
++E LF EA L E V+ +G+ + + L + ++ ++ D++ F
Sbjct: 476 TLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIF 535
Query: 572 Y-NPAMARRYAISQ 584
PA+ A+S
Sbjct: 536 RCKPAVQTYQALSH 549
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 154/332 (46%), Gaps = 12/332 (3%)
Query: 230 TILRKYTEKYL----THVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKK 285
++++ Y +K L HV + K+K++ V Q + + +L+D C+ + A ++
Sbjct: 301 SLIKGYCKKGLMEEAEHVFELLKEKKL-VADQ---HMYGVLMDGYCRTGQIRDAVRVHDN 356
Query: 286 MRKI-INTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGM 344
M +I + TN N L+ G+C+ ++ M +PD+ TYNT +D YC+AG
Sbjct: 357 MIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGY 416
Query: 345 ITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTT 404
+ EA+ L + M K PT TY I++ ++ + L M+ G D +
Sbjct: 417 VDEALKLCDQMCQKEVV---PTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEIS 473
Query: 405 YKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMI 464
++E + G +EA K E + +G D +T N + LC +K EA ++ +
Sbjct: 474 CSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVN 533
Query: 465 ELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTE 524
RC P+VQTY L ++++ + AF + ME++G + Y +I G F
Sbjct: 534 IFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLN 593
Query: 525 EACSLLEEVINKGIKLPYKKFDSFLIQLSDLG 556
+ L+ E+ +G+ + + + ++G
Sbjct: 594 KVADLVIELRARGLTPTVATYGALITGWCNIG 625
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 145/298 (48%), Gaps = 11/298 (3%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMK 315
+P+ + +N L+D C+ V+ A L +M +K + TYNIL+ G+ R+ + +
Sbjct: 398 KPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLS 457
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
L + M++ G D + +T L+ K G EA+ L+E + +G + T +MI
Sbjct: 458 LWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLN---VMIS 514
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
L + +++ E +++ + C P V TY+ + G G + EA+ E M KG P
Sbjct: 515 GLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFP 574
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRC---IPSVQTYNMLISMFFEMDDPDGAF 492
I YN + K K+ +IELR P+V TY LI+ + + D A+
Sbjct: 575 TIEMYNTLI---SGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAY 631
Query: 493 ETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLP-YKKFDSFL 549
T EM ++G L+ + + LF +K +EAC LL+++++ + LP Y+ FL
Sbjct: 632 ATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFL 689
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 72/139 (51%), Gaps = 2/139 (1%)
Query: 327 PDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEEC 386
P+N YN A+ CKAG + +A LF + + I P TY I+I A + +
Sbjct: 717 PNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFI--PDEYTYTILIHGCAIAGDINKA 774
Query: 387 FKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRV 446
F L M G +P++ TY +I+G+C G +D A + L ++ KG P+ +TYN +
Sbjct: 775 FTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDG 834
Query: 447 LCDNKKSEEALKLYGRMIE 465
L + EA++L +MIE
Sbjct: 835 LVKSGNVAEAMRLKEKMIE 853
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 140/323 (43%), Gaps = 17/323 (5%)
Query: 195 LSSTKYKVKQFRIVCDMLDYMKRKNKSTVP-VEVLMTILR-KYTEKYLTHVQKFAKKKRI 252
LS YKV + + +YM+RK P +E+ T++ + ++L V + R
Sbjct: 547 LSHGYYKVGNLKEAFAVKEYMERK--GIFPTIEMYNTLISGAFKYRHLNKVADLVIELRA 604
Query: 253 RVKTQPEINAFNLLLDALCKCCLVEYAEGL-YKKMRKIINTNAETYNILVFGWCRVRSPT 311
R T P + + L+ C +++ A ++ + K I N + + R+
Sbjct: 605 RGLT-PTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKID 663
Query: 312 RGMKLLEEMIQL-----GHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPT 366
LL++++ G++ + T K I E+V+ + + P
Sbjct: 664 EACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVE-----NSTPKKLLVPN 718
Query: 367 AKTYAIMIVTLAQNDRMEECFKLMGYMISSG-CLPDVTTYKDIIEGVCLCGKIDEAYKFL 425
Y + I L + ++E+ KL ++SS +PD TY +I G + G I++A+
Sbjct: 719 NIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLR 778
Query: 426 EEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEM 485
+EM KG P+IVTYN ++ LC + A +L ++ + P+ TYN LI +
Sbjct: 779 DEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKS 838
Query: 486 DDPDGAFETWQEMEKRGCNLDTD 508
+ A ++M ++G +D
Sbjct: 839 GNVAEAMRLKEKMIEKGLVRGSD 861
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 119/285 (41%), Gaps = 5/285 (1%)
Query: 287 RKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMIT 346
RK I E YN L+ G + R + L+ E+ G P TY + +C GMI
Sbjct: 569 RKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMID 628
Query: 347 EAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYK 406
+A M KG T++ A + L + D E C L + LP + K
Sbjct: 629 KAYATCFEMIEKGITLNVNICSKIANSLFRLDKID--EACLLLQKIVDFDLLLPGYQSLK 686
Query: 407 DIIEG-VCLCGKIDEAYKFLE-EMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMI 464
+ +E C K + + +E K P+ + YN + LC K E+A KL+ ++
Sbjct: 687 EFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLL 746
Query: 465 EL-RCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKT 523
R IP TY +LI D + AF EM +G + TY +I+GL
Sbjct: 747 SSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNV 806
Query: 524 EEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHM 568
+ A LL ++ KGI +++ + L G++ +L + M
Sbjct: 807 DRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKM 851
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 123/260 (47%), Gaps = 3/260 (1%)
Query: 296 TYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFM 355
TYN L+ G L+ E+ + G D+ TYN ++ YC+ G +A L + M
Sbjct: 364 TYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEM 423
Query: 356 RTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLC 415
T G PT TY +I L + ++ E +L ++ G PD+ +++G C
Sbjct: 424 MTDGI---QPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAI 480
Query: 416 GKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTY 475
G +D A+ L+EM PD VTYNC +R LC K EEA +L G M P +Y
Sbjct: 481 GNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISY 540
Query: 476 NMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVIN 535
N LIS + + D AF EM G N TY +++GL + E A LL E+ +
Sbjct: 541 NTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKS 600
Query: 536 KGIKLPYKKFDSFLIQLSDL 555
+GI F S + +S+L
Sbjct: 601 EGIVPNDSSFCSVIEAMSNL 620
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 150/362 (41%), Gaps = 45/362 (12%)
Query: 253 RVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPT 311
R++ + + FN++++ LCK ++ A+G M I TYN LV G+ +R
Sbjct: 218 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFS-LRGRI 276
Query: 312 RGMKLL-EEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
G +L+ EM G +PD TYN L C G A ++ M+ G P + +Y
Sbjct: 277 EGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLV---PDSVSY 330
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLP------------------------------ 400
I+I + N +E F M+ G +P
Sbjct: 331 NILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIRE 390
Query: 401 -----DVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEE 455
D TY +I G C G +A+ +EM G P TY + VLC K+ E
Sbjct: 391 KGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTRE 450
Query: 456 ALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIE 515
A +L+ +++ P + N L+ + + D AF +EM+ N D TY ++
Sbjct: 451 ADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMR 510
Query: 516 GLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMRKF-YNP 574
GL K EEA L+ E+ +GIK + +++ + S GD + D M +NP
Sbjct: 511 GLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNP 570
Query: 575 AM 576
+
Sbjct: 571 TL 572
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 125/276 (45%), Gaps = 14/276 (5%)
Query: 297 YNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEA----VDLF 352
+++LV C++R ++ M + G P T N L + I A D++
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMY 217
Query: 353 EFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGV 412
M K + T+ IMI L + ++++ +G M G P + TY +++G
Sbjct: 218 R-MEIKSNVY------TFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGF 270
Query: 413 CLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSV 472
L G+I+ A + EM +KG+ PD+ TYN L +C+ ++ E L+ M E+ +P
Sbjct: 271 SLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLR---EMKEIGLVPDS 327
Query: 473 QTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEE 532
+YN+LI D + AF EM K+G TY +I GLF NK E A L+ E
Sbjct: 328 VSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIRE 387
Query: 533 VINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHM 568
+ KGI L ++ + GD L D M
Sbjct: 388 IREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEM 423
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 125/283 (44%), Gaps = 7/283 (2%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKL 316
P+ N +L L + +E A Y M ++ I +N T+NI++ C+ +
Sbjct: 188 PKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGF 247
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
L M G +P TYNT + + G I A + M++KG P +TY ++
Sbjct: 248 LGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKG---FQPDMQTYNPILSW 304
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
+ R E + M + G +PD +Y +I G G ++ A+ + +EM +G P
Sbjct: 305 MCNEGRASEVLREMKEI---GLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPT 361
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQ 496
TYN + L K E A L + E + TYN+LI+ + + D AF
Sbjct: 362 FYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHD 421
Query: 497 EMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
EM G TY +I L NKT EA L E+V+ KG+K
Sbjct: 422 EMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMK 464
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 124/280 (44%), Gaps = 11/280 (3%)
Query: 265 LLLDALCKCC-----LVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLEE 319
+L D L +CC + E E Y K ET N ++ R+ +
Sbjct: 156 ILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYAD 215
Query: 320 MIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQ 379
M ++ + + +T+N ++ CK G + +A M G PT TY ++ +
Sbjct: 216 MYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFG---IKPTIVTYNTLVQGFSL 272
Query: 380 NDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVT 439
R+E ++ M S G PD+ TY I+ +C G+ E L EM G PD V+
Sbjct: 273 RGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEV---LREMKEIGLVPDSVS 329
Query: 440 YNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEME 499
YN +R +N E A M++ +P+ TYN LI F + + A +E+
Sbjct: 330 YNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIR 389
Query: 500 KRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
++G LD+ TY ++I G ++A +L +E++ GI+
Sbjct: 390 EKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQ 429
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 112/262 (42%), Gaps = 33/262 (12%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMKL 316
P +N L+ L +E AE L +++R K I ++ TYNIL+ G+C+ + L
Sbjct: 360 PTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFAL 419
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTIS------------- 363
+EM+ G +P FTY + + C+ EA +LFE + KG
Sbjct: 420 HDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCA 479
Query: 364 -------------------SPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTT 404
+P TY ++ L + EE +LMG M G PD +
Sbjct: 480 IGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHIS 539
Query: 405 YKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMI 464
Y +I G G A+ +EM + G+ P ++TYN L+ L N++ E A +L M
Sbjct: 540 YNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMK 599
Query: 465 ELRCIPSVQTYNMLISMFFEMD 486
+P+ ++ +I +D
Sbjct: 600 SEGIVPNDSSFCSVIEAMSNLD 621
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 78/190 (41%), Gaps = 6/190 (3%)
Query: 381 DRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTY 440
D ECF LM G P T I+ + +I+ A+ F +M ++ T+
Sbjct: 172 DEAIECFYLMK---EKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTF 228
Query: 441 NCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEK 500
N + VLC K ++A G M P++ TYN L+ F +GA EM+
Sbjct: 229 NIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKS 288
Query: 501 RGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHA 560
+G D TY ++ + N + E ++E+ G+ ++ + S+ GDL
Sbjct: 289 KGFQPDMQTYNPILSWMCNEGRASEVLREMKEI---GLVPDSVSYNILIRGCSNNGDLEM 345
Query: 561 IHKLSDHMRK 570
D M K
Sbjct: 346 AFAYRDEMVK 355
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 170/390 (43%), Gaps = 25/390 (6%)
Query: 178 QENYSHEPCAYNDMMDILS----STKYKVKQFRIVCDMLDY-MKRKNKSTVPVEVLMTIL 232
+ +Y C N +D+L + +Y+ RI + D+ +KR +S + L+ +L
Sbjct: 110 RNSYPPIKCGENLFIDLLRNYGLAGRYE-SSMRIFLRIPDFGVKRSVRS---LNTLLNVL 165
Query: 233 RKYTEKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI--- 289
+ L H K + P I NLL+ ALCK +E A YK + +I
Sbjct: 166 IQNQRFDLVHA--MFKNSKESFGITPNIFTCNLLVKALCKKNDIESA---YKVLDEIPSM 220
Query: 290 -INTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEA 348
+ N TY ++ G+ ++LEEM+ G PD TY +D YCK G +EA
Sbjct: 221 GLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEA 280
Query: 349 VDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDI 408
+ + M P TY +MI L + + E + M+ +PD + +
Sbjct: 281 ATVMDDMEKNE---IEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKV 337
Query: 409 IEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRC 468
I+ +C K+DEA +M PD + + LC + EA KL+ E
Sbjct: 338 IDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDE-FEKGS 396
Query: 469 IPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACS 528
IPS+ TYN LI+ E + A W +M +R C + TY V+IEGL +E
Sbjct: 397 IPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVR 456
Query: 529 LLEEVINKGIKLPYKKFDSFLIQLSDLGDL 558
+LEE++ G P K +FLI L L
Sbjct: 457 VLEEMLEIGC-FPNKT--TFLILFEGLQKL 483
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 161/410 (39%), Gaps = 55/410 (13%)
Query: 167 IAFRFFTWAGNQENYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVE 226
+A + F +AG SH +N D S +K+ + R + M S P++
Sbjct: 64 LALQIFLYAGK----SHPGFTHN--YDTYHSILFKLSRARAFDPVESLMADLRNSYPPIK 117
Query: 227 ----VLMTILRKY--TEKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAE 280
+ + +LR Y +Y + ++ F + VK + + N LL+ L + +
Sbjct: 118 CGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRS--VRSLNTLLNVLIQNQRFDLVH 175
Query: 281 GLYKKMRKI--INTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDT 338
++K ++ I N T N+LV C+ K+L+E+ +G P+ TY T L
Sbjct: 176 AMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGG 235
Query: 339 YCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGC 398
Y G ME +++ M+ G
Sbjct: 236 YVARG--------------------------------------DMESAKRVLEEMLDRGW 257
Query: 399 LPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALK 458
PD TTY +++G C G+ EA +++M P+ VTY +R LC KKS EA
Sbjct: 258 YPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARN 317
Query: 459 LYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLF 518
++ M+E +P +I E D A W++M K C D +I L
Sbjct: 318 MFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLC 377
Query: 519 NCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHM 568
+ EA L +E KG +++ + + + G+L +L D M
Sbjct: 378 KEGRVTEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDM 426
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 102/224 (45%), Gaps = 2/224 (0%)
Query: 354 FMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVC 413
F +K S +P T +++ L + + +E +K++ + S G +P++ TY I+ G
Sbjct: 178 FKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYV 237
Query: 414 LCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQ 473
G ++ A + LEEM ++G+ PD TY + C + EA + M + P+
Sbjct: 238 ARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEV 297
Query: 474 TYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEV 533
TY ++I + A + EM +R D+ C +I+ L +K +EAC L ++
Sbjct: 298 TYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKM 357
Query: 534 INKGIKLPYKKFDSFLIQ-LSDLGDLHAIHKLSDHMRKFYNPAM 576
+ +P S LI L G + KL D K P++
Sbjct: 358 LKNNC-MPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPSL 400
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 3/149 (2%)
Query: 249 KKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVR 308
+K ++ P+ + L+ LCK V A L+ + K + TYN L+ G C
Sbjct: 355 RKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTLIAGMCEKG 414
Query: 309 SPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAK 368
T +L ++M + +P+ FTYN ++ K G + E V + E M G P
Sbjct: 415 ELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCF---PNKT 471
Query: 369 TYAIMIVTLAQNDRMEECFKLMGYMISSG 397
T+ I+ L + + E+ K++ + +G
Sbjct: 472 TFLILFEGLQKLGKEEDAMKIVSMAVMNG 500
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 185/412 (44%), Gaps = 27/412 (6%)
Query: 148 PLSTPLVTGVLHRLRYDEKIA--FRFFTWAGNQENYSHEPCAYNDMMDILSSTKYKVKQF 205
P T T VL LR + A RFF W N+ +SH+ ++ M++ L + +
Sbjct: 62 PSQTISRTTVLQTLRLIKVPADGLRFFDWVSNK-GFSHKEQSFFLMLEFLG----RARNL 116
Query: 206 RIVCDMLDYMKRKNKSTVPVE--VLMTILRKYTEKYLTH--VQKFAKKKRIRVKTQPEIN 261
+ + L ++R++ V ++ +++R Y L V+ F K++ + P +
Sbjct: 117 NVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGI--SPSVL 174
Query: 262 AFNLLLDALCKCCLVEYAEGLYKKMRKI--INTNAETYNILVFGWCRVRSPTRGMKLLEE 319
FN LL L K A L+ +MR+ + ++ T+N L+ G+C+ ++ ++
Sbjct: 175 TFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKD 234
Query: 320 MIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQ 379
M PD TYNT +D C+AG + A ++ M K + + P +Y ++
Sbjct: 235 MELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDV-HPNVVSYTTLVRGYCM 293
Query: 380 NDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKG---YPPD 436
++E + M+S G P+ TY +I+G+ + DE L GN + PD
Sbjct: 294 KQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIG-GNDAFTTFAPD 352
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLIS---MFFEMDDPDGAFE 493
T+N ++ CD + A+K++ M+ ++ P +Y++LI M E D + F
Sbjct: 353 ACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFN 412
Query: 494 TWQEME----KRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLP 541
E E K C Y M E L KT++A + +++ +G++ P
Sbjct: 413 ELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDP 464
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 134/320 (41%), Gaps = 44/320 (13%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRV----RSPTR 312
P+ FN+L+ A C ++ A ++++M + ++ ++ +Y++L+ C R+ T
Sbjct: 351 PDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETL 410
Query: 313 GMKLLEEMIQLGH---RPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKT 369
+L E+ + LG +P YN + C G +A +F + +G + P +
Sbjct: 411 FNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRG--VQDPP--S 466
Query: 370 YAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMG 429
Y +I + + + ++L+ M+ +PD+ TY+ +I+G+ G+ A+ L+ M
Sbjct: 467 YKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRML 526
Query: 430 NKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPD 489
Y P T++ L L K + E+ L M+E R ++ ++ + F +
Sbjct: 527 RSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKE 586
Query: 490 GAFETWQEMEKRG------------CN--------------------LDTDTYCVMIEGL 517
AF + + G C +D DT +IEGL
Sbjct: 587 KAFLIVRLLYDNGYLVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGL 646
Query: 518 FNCNKTEEACSLLEEVINKG 537
+ EA SL E++ G
Sbjct: 647 CKHKRHSEAFSLYNELVELG 666
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/392 (20%), Positives = 162/392 (41%), Gaps = 14/392 (3%)
Query: 138 LEKALDQLAIPLSTPLVTGVLHRLRYDEKIAFRFFTWAGNQE--NYSHEPCAYNDMMDIL 195
L + L A+ +T L+ G+ RYDE + GN ++ + C +N ++
Sbjct: 308 LSRGLKPNAVTYNT-LIKGLSEAHRYDE---IKDILIGGNDAFTTFAPDACTFNILIKAH 363
Query: 196 SSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEKYLTHVQKFAKKKRIRVK 255
+ ++ +ML+ + ++ V + +R ++ T + +K+ + K
Sbjct: 364 CDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGK 423
Query: 256 TQ--PEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRG 313
+ P A+N + + LC + AE +++++ K + +Y L+ G CR
Sbjct: 424 DECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPSYKTLITGHCREGKFKPA 483
Query: 314 MKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIM 373
+LL M++ PD TY +D K G A D + M + S + P A T+ +
Sbjct: 484 YELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRM-LRSSYL--PVATTFHSV 540
Query: 374 IVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGY 433
+ LA+ E F L+ M+ ++ ++ + + ++A+ + + + GY
Sbjct: 541 LAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGY 600
Query: 434 PPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFE 493
+V L LC+N+K +A L +E + + T N +I + AF
Sbjct: 601 ---LVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFS 657
Query: 494 TWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEE 525
+ E+ + G + + V+ L K EE
Sbjct: 658 LYNELVELGNHQQLSCHVVLRNALEAAGKWEE 689
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 94/217 (43%), Gaps = 7/217 (3%)
Query: 325 HRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTL--AQNDR 382
H + T L T + + + F+++ KG S +++ +M+ L A+N
Sbjct: 61 HPSQTISRTTVLQTLRLIKVPADGLRFFDWVSNKGF---SHKEQSFFLMLEFLGRARNLN 117
Query: 383 MEECFKLMGYMISSGCLPDVTTY-KDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYN 441
+ F S+GC+ Y +I G E+ K + M G P ++T+N
Sbjct: 118 VARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFN 177
Query: 442 CFLRVLCDNKKSEEALKLYGRMIELRCI-PSVQTYNMLISMFFEMDDPDGAFETWQEMEK 500
L +L ++ A L+ M + P T+N LI+ F + D AF +++ME
Sbjct: 178 SLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMEL 237
Query: 501 RGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKG 537
CN D TY +I+GL K + A ++L ++ K
Sbjct: 238 YHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKA 274
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/251 (18%), Positives = 102/251 (40%), Gaps = 3/251 (1%)
Query: 307 VRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPT 366
++ P G++ + + G ++ L+ +A + A + + + +
Sbjct: 78 IKVPADGLRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQ 137
Query: 367 AKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLE 426
+ + +I + +E KL M G P V T+ ++ + G+ A+ +
Sbjct: 138 DRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFD 197
Query: 427 EMGNK-GYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEM 485
EM G PD T+N + C N +EA +++ M C P V TYN +I
Sbjct: 198 EMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRA 257
Query: 486 DDPDGAFETWQEMEKRGCNLDTD--TYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYK 543
A M K+ ++ + +Y ++ G + +EA + +++++G+K
Sbjct: 258 GKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAV 317
Query: 544 KFDSFLIQLSD 554
+++ + LS+
Sbjct: 318 TYNTLIKGLSE 328
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 135/315 (42%), Gaps = 39/315 (12%)
Query: 260 INAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMKLLE 318
I +N+L+D LCK V A G+ K + K + + TY LV+G C+V+ G+++++
Sbjct: 262 IVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMD 321
Query: 319 EM-----------------------------------IQLGHRPDNFTYNTALDTYCKAG 343
EM + G P+ F YN +D+ CK
Sbjct: 322 EMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGR 381
Query: 344 MITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVT 403
EA LF+ M G P TY+I+I + +++ +G M+ +G V
Sbjct: 382 KFHEAELLFDRM---GKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVY 438
Query: 404 TYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRM 463
Y +I G C G I A F+ EM NK P +VTY + C K +AL+LY M
Sbjct: 439 PYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEM 498
Query: 464 IELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKT 523
PS+ T+ L+S F A + + EM + + TY VMIEG
Sbjct: 499 TGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDM 558
Query: 524 EEACSLLEEVINKGI 538
+A L+E+ KGI
Sbjct: 559 SKAFEFLKEMTEKGI 573
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 173/408 (42%), Gaps = 48/408 (11%)
Query: 201 KVKQFRIVCDMLDYMK--RKNKSTVPVEVLMTILRKY--TEKYLTHVQKFAKKKRIRVKT 256
KV++F I +M+D M R + S V L+ LRK E+ L V K+ +
Sbjct: 309 KVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLV-----KRVVDFGV 363
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMK 315
P + +N L+D+LCK AE L+ +M KI + N TY+IL+ +CR +
Sbjct: 364 SPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALS 423
Query: 316 LLEEMIQLGHR-----------------------------------PDNFTYNTALDTYC 340
L EM+ G + P TY + + YC
Sbjct: 424 FLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYC 483
Query: 341 KAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLP 400
G I +A+ L+ M KG +P+ T+ ++ L + + + KL M P
Sbjct: 484 SKGKINKALRLYHEMTGKG---IAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKP 540
Query: 401 DVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLY 460
+ TY +IEG C G + +A++FL+EM KG PD +Y + LC ++ EA
Sbjct: 541 NRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFV 600
Query: 461 GRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNC 520
+ + C + Y L+ F + A QEM +RG +LD Y V+I+G
Sbjct: 601 DGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKH 660
Query: 521 NKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHM 568
+ LL+E+ ++G+K + S + S GD + D M
Sbjct: 661 KDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLM 708
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 122/276 (44%), Gaps = 4/276 (1%)
Query: 263 FNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMI 321
+N L++ CK + AEG +M K + TY L+ G+C + ++L EM
Sbjct: 440 YNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMT 499
Query: 322 QLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQND 381
G P +T+ T L +AG+I +AV LF M P TY +MI +
Sbjct: 500 GKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNV---KPNRVTYNVMIEGYCEEG 556
Query: 382 RMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYN 441
M + F+ + M G +PD +Y+ +I G+CL G+ EA F++ + + + Y
Sbjct: 557 DMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYT 616
Query: 442 CFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKR 501
L C K EEAL + M++ + Y +LI + D F +EM R
Sbjct: 617 GLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDR 676
Query: 502 GCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKG 537
G D Y MI+ +EA + + +IN+G
Sbjct: 677 GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEG 712
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 150/380 (39%), Gaps = 70/380 (18%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKL 316
P I F LL L + L+ A L+ +M + + N TYN+++ G+C ++ +
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEF 564
Query: 317 LEEMIQLGHRPDNFTY-----------------------------------NTALDTYCK 341
L+EM + G PD ++Y L +C+
Sbjct: 565 LKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCR 624
Query: 342 AGMITEAVDLFEFMRTKGSTIS--------------------------------SPTAKT 369
G + EA+ + + M +G + P
Sbjct: 625 EGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVI 684
Query: 370 YAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMG 429
Y MI ++ +E F + MI+ GC+P+ TY +I G+C G ++EA +M
Sbjct: 685 YTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQ 744
Query: 430 NKGYPPDIVTYNCFLRVLCDNKKS-EEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDP 488
P+ VTY CFL +L + ++A++L+ +++ + + TYNMLI F
Sbjct: 745 PVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRI 803
Query: 489 DGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSF 548
+ A E M G + D TY MI L N ++A L + KGI+ +++
Sbjct: 804 EEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTL 863
Query: 549 LIQLSDLGDLHAIHKLSDHM 568
+ G++ +L + M
Sbjct: 864 IHGCCVAGEMGKATELRNEM 883
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 101/451 (22%), Positives = 176/451 (39%), Gaps = 38/451 (8%)
Query: 147 IPLSTPLVTGVLHRLRYDE---------KIAFRFFTWAGNQENYSHEPCAYNDMMDILSS 197
I LS+ LV+ L + +E K+ RFF + G + H ++ IL
Sbjct: 57 IALSSELVSRRLKTVHVEEILIGTIDDPKLGLRFFNFLGLHRGFDHSTASFC----ILIH 112
Query: 198 TKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEKYLTH-------VQKFAKKK 250
K F +L + + P +V + Y + L+ +Q + + +
Sbjct: 113 ALVKANLFWPASSLLQTLLLRALK--PSDVFNVLFSCYEKCKLSSSSSFDLLIQHYVRSR 170
Query: 251 RI------------RVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETY 297
R+ +V PE+ + LL L K A L+ M + I + Y
Sbjct: 171 RVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIY 230
Query: 298 NILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRT 357
++ C ++ +R +++ M G + YN +D CK + EAV + + +
Sbjct: 231 TGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAG 290
Query: 358 KGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGK 417
K P TY ++ L + E ++M M+ P ++EG+ GK
Sbjct: 291 KD---LKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGK 347
Query: 418 IDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNM 477
I+EA ++ + + G P++ YN + LC +K EA L+ RM ++ P+ TY++
Sbjct: 348 IEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSI 407
Query: 478 LISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKG 537
LI MF D A EM G L Y +I G A + E+INK
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKK 467
Query: 538 IKLPYKKFDSFLIQLSDLGDLHAIHKLSDHM 568
++ + S + G ++ +L M
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEM 498
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 137/321 (42%), Gaps = 4/321 (1%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSP 310
+ V +P++ + ++ +LC+ + A+ + M + N YN+L+ G C+ +
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
+ + +++ +PD TY T + CK + E E M SP+
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK---VQEFEIGLEMMDEMLCLRFSPSEAAV 335
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGN 430
+ ++ L + ++EE L+ ++ G P++ Y +I+ +C K EA + MG
Sbjct: 336 SSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGK 395
Query: 431 KGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDG 490
G P+ VTY+ + + C K + AL G M++ SV YN LI+ + D
Sbjct: 396 IGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISA 455
Query: 491 AFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLI 550
A EM + TY ++ G + K +A L E+ KGI F + L
Sbjct: 456 AEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLS 515
Query: 551 QLSDLGDLHAIHKLSDHMRKF 571
L G + KL + M ++
Sbjct: 516 GLFRAGLIRDAVKLFNEMAEW 536
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 86/185 (46%), Gaps = 7/185 (3%)
Query: 320 MIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISS-PTAKTYAIMIVTLA 378
MI G P+ TY ++ CKAG + EA E + +K +SS P TY + L
Sbjct: 708 MINEGCVPNEVTYTAVINGLCKAGFVNEA----EVLCSKMQPVSSVPNQVTYGCFLDILT 763
Query: 379 QND-RMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDI 437
+ + M++ +L ++ G L + TY +I G C G+I+EA + + M G PD
Sbjct: 764 KGEVDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDC 822
Query: 438 VTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQE 497
+TY + LC ++A++L+ M E P YN LI + A E E
Sbjct: 823 ITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNE 882
Query: 498 MEKRG 502
M ++G
Sbjct: 883 MLRQG 887
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 102/240 (42%), Gaps = 2/240 (0%)
Query: 332 YNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMG 391
++ + Y ++ + + V +F+ M TK S + P +T + ++ L + +L
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLL--PEVRTLSALLHGLVKFRHFGLAMELFN 216
Query: 392 YMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNK 451
M+S G PDV Y +I +C + A + + M G +IV YN + LC +
Sbjct: 217 DMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQ 276
Query: 452 KSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYC 511
K EA+ + + P V TY L+ ++ + + E EM +
Sbjct: 277 KVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVS 336
Query: 512 VMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMRKF 571
++EGL K EEA +L++ V++ G+ +++ + L H L D M K
Sbjct: 337 SLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKI 396
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 100/223 (44%), Gaps = 12/223 (5%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINT----NAETYNILVFGWCRVRSPTR 312
+P+ + ++DA K + A G++ M IN N TY ++ G C+
Sbjct: 679 KPDDVIYTSMIDAKSKTGDFKEAFGIWDLM---INEGCVPNEVTYTAVINGLCKAGFVNE 735
Query: 313 GMKLLEEMIQLGHRPDNFTYNTALDTYCKAGM-ITEAVDLFEFMRTKGSTISSPTAKTYA 371
L +M + P+ TY LD K + + +AV+L + KG + + TA TY
Sbjct: 736 AEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAI-LKG--LLANTA-TYN 791
Query: 372 IMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNK 431
++I + R+EE +L+ MI G PD TY +I +C + +A + M K
Sbjct: 792 MLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEK 851
Query: 432 GYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQT 474
G PD V YN + C + +A +L M+ IP+ +T
Sbjct: 852 GIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 145/315 (46%), Gaps = 39/315 (12%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKL 316
P I F+ LL A+ K + +KM + I+ N TYNIL+ +CR + + L
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
L +M++LG+ PD T N+ L+ +C I++AV L + M G P T+ +I
Sbjct: 136 LGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGY---KPDTVTFTTLIHG 192
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKI------------------ 418
L +++ E L+ M+ GC PD+ TY ++ G+C G
Sbjct: 193 LFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEAN 252
Query: 419 -----------------DEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYG 461
D+A EM NKG P+++TY+ + LC+ + +A +L
Sbjct: 253 VVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLS 312
Query: 462 RMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCN 521
MIE + P++ T++ LI F + A + ++EM KR + + TY +I G +
Sbjct: 313 DMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLD 372
Query: 522 KTEEACSLLEEVINK 536
+ EA +LE +I K
Sbjct: 373 RLGEAKQMLELMIRK 387
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 131/276 (47%), Gaps = 4/276 (1%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMK 315
QP++ + +++ LCK + A L KM I N Y+ ++ C+ R +
Sbjct: 215 QPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALN 274
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
L EM G RP+ TY++ + C G ++A L M + +P T++ +I
Sbjct: 275 LFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKI---NPNLVTFSALID 331
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
+ ++ + KL MI P++ TY +I G C+ ++ EA + LE M K P
Sbjct: 332 AFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLP 391
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
++VTYN + C K+ ++ ++L+ M + + + TY LI FF+ D D A +
Sbjct: 392 NVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 451
Query: 496 QEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLE 531
++M G + + TY ++++GL K +A + E
Sbjct: 452 KQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFE 487
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 143/325 (44%), Gaps = 39/325 (12%)
Query: 250 KRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVR 308
K +++ +P+I N LL+ C + A L +M ++ + T+ L+ G
Sbjct: 138 KMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHN 197
Query: 309 SPTRGMKLLEEMIQLGHRPDNFTY-----------------------------------N 333
+ + L++ M+Q G +PD TY +
Sbjct: 198 KASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYS 257
Query: 334 TALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYM 393
T +D+ CK +A++LF M KG P TY+ +I L R + +L+ M
Sbjct: 258 TVIDSLCKYRHEDDALNLFTEMENKGV---RPNVITYSSLISCLCNYGRWSDASRLLSDM 314
Query: 394 ISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKS 453
I P++ T+ +I+ GK+ +A K EEM + P+I TY+ + C +
Sbjct: 315 IERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRL 374
Query: 454 EEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVM 513
EA ++ MI C+P+V TYN LI+ F + D E ++EM +RG +T TY +
Sbjct: 375 GEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTL 434
Query: 514 IEGLFNCNKTEEACSLLEEVINKGI 538
I G F + A + +++++ G+
Sbjct: 435 IHGFFQARDCDNAQMVFKQMVSVGV 459
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 128/269 (47%), Gaps = 4/269 (1%)
Query: 255 KTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRG 313
K + + ++ ++D+LCK + A L+ +M K + N TY+ L+ C +
Sbjct: 248 KIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDA 307
Query: 314 MKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIM 373
+LL +MI+ P+ T++ +D + K G + +A L+E M + P TY+ +
Sbjct: 308 SRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSI---DPNIFTYSSL 364
Query: 374 IVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGY 433
I DR+ E +++ MI CLP+V TY +I G C ++D+ + EM +G
Sbjct: 365 INGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGL 424
Query: 434 PPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFE 493
+ VTY + + + A ++ +M+ + P++ TYN+L+ + A
Sbjct: 425 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMV 484
Query: 494 TWQEMEKRGCNLDTDTYCVMIEGLFNCNK 522
++ +++ D TY +MIEG+ K
Sbjct: 485 VFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 101/202 (50%), Gaps = 4/202 (1%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSP 310
I K P + F+ L+DA K + AE LY++M ++ I+ N TY+ L+ G+C +
Sbjct: 315 IERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRL 374
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
++LE MI+ P+ TYNT ++ +CKA + + ++LF M +G ++ T T
Sbjct: 375 GEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTL 434
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGN 430
D + FK M+S G P++ TY +++G+C GK+ +A E +
Sbjct: 435 IHGFFQARDCDNAQMVFK---QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 491
Query: 431 KGYPPDIVTYNCFLRVLCDNKK 452
PDI TYN + +C K
Sbjct: 492 STMEPDIYTYNIMIEGMCKAGK 513
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 1/210 (0%)
Query: 369 TYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEM 428
TY I+I + R+ L+G M+ G PD+ T ++ G C +I +A +++M
Sbjct: 115 TYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQM 174
Query: 429 GNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDP 488
GY PD VT+ + L + K+ EA+ L RM++ C P + TY +++ + D
Sbjct: 175 VEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDT 234
Query: 489 DGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSF 548
D A +ME + Y +I+ L ++A +L E+ NKG++ + S
Sbjct: 235 DLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 294
Query: 549 LIQLSDLGDLH-AIHKLSDHMRKFYNPAMA 577
+ L + G A LSD + + NP +
Sbjct: 295 ISCLCNYGRWSDASRLLSDMIERKINPNLV 324
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 91/206 (44%), Gaps = 2/206 (0%)
Query: 352 FEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEG 411
F F R + S T+ Y ++ T + +++ L G M S P + + ++
Sbjct: 30 FSFCRRRA--FSGKTSYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSA 87
Query: 412 VCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPS 471
+ K D F E+M G ++ TYN + C + AL L G+M++L P
Sbjct: 88 IAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPD 147
Query: 472 VQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLE 531
+ T N L++ F + A +M + G DT T+ +I GLF NK EA +L++
Sbjct: 148 IVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALID 207
Query: 532 EVINKGIKLPYKKFDSFLIQLSDLGD 557
++ +G + + + + L GD
Sbjct: 208 RMVQRGCQPDLVTYGAVVNGLCKRGD 233
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 161/376 (42%), Gaps = 15/376 (3%)
Query: 160 RLRYDEKIA---FRFFTWAGNQENYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMK 216
RL D+K A F WA + H Y + L ++F V +LD M
Sbjct: 48 RLILDQKSASGALETFRWASTFPGFIHSRSTYRALFHKLCV----FRRFDTVYQLLDEMP 103
Query: 217 RKNKSTVPVEVLMTILRKYTEKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLV 276
+ +TI+R + L + +P + FN +LD L K +
Sbjct: 104 DSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDID 163
Query: 277 EYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTA 335
E +KM I+ + TY IL+ G G KLL+ M G P+ YNT
Sbjct: 164 IAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTL 223
Query: 336 LDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMIS 395
L CK G + A R+ S + P T+ I+I ++ + L+ S
Sbjct: 224 LHALCKNGKVGRA-------RSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFS 276
Query: 396 SGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEE 455
G +PDV T ++E +C G++ EA + LE + +KG D+V N ++ C K
Sbjct: 277 LGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRV 336
Query: 456 ALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIE 515
A + + M +P+V+TYN+LI+ + ++ D A +T+ +M+ + T+ +I
Sbjct: 337 AQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIR 396
Query: 516 GLFNCNKTEEACSLLE 531
GL +T++ +LE
Sbjct: 397 GLSIGGRTDDGLKILE 412
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 130/309 (42%), Gaps = 4/309 (1%)
Query: 259 EINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKLL 317
++ A N L+ C + A+ + +M RK N ETYN+L+ G+C V +
Sbjct: 317 DVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTF 376
Query: 318 EEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTL 377
+M R + T+NT + G + + + E M+ T+ Y +I
Sbjct: 377 NDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQ-DSDTVHGARIDPYNCVIYGF 435
Query: 378 AQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDI 437
+ +R E+ + + M P + +C G +D+ ++M +G P I
Sbjct: 436 YKENRWEDALEFLLKM--EKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSI 493
Query: 438 VTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQE 497
+ +C + + K EE+L+L M+ +P T+N +I F + D + ++
Sbjct: 494 IVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVED 553
Query: 498 MEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGD 557
M +RGC DT++Y ++E L ++A L ++ K I + S + LS
Sbjct: 554 MAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQKTA 613
Query: 558 LHAIHKLSD 566
+H L D
Sbjct: 614 IHVNSSLQD 622
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/378 (20%), Positives = 139/378 (36%), Gaps = 70/378 (18%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLL 317
P +N LL ALCK V A L +M++ N T+NIL+ +C + + M LL
Sbjct: 215 PNAVVYNTLLHALCKNGKVGRARSLMSEMKE---PNDVTFNILISAYCNEQKLIQSMVLL 271
Query: 318 EEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISS------------- 364
E+ LG PD T ++ C G ++EA+++ E + +KG +
Sbjct: 272 EKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCAL 331
Query: 365 -------------------PTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTY 405
P +TY ++I ++ M + + T+
Sbjct: 332 GKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATF 391
Query: 406 KDIIEGVCLCGKIDEAYKFLEEMGNKG--YPPDIVTYNCFLRVLCDNKKSEEALKL---- 459
+I G+ + G+ D+ K LE M + + I YNC + + E+AL+
Sbjct: 392 NTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKM 451
Query: 460 -----------------------------YGRMIELRCIPSVQTYNMLISMFFEMDDPDG 490
Y +MI +PS+ + LI + + +
Sbjct: 452 EKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEE 511
Query: 491 AFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLI 550
+ E +M RG + T+ +I G +K +E++ +G + ++ L
Sbjct: 512 SLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLE 571
Query: 551 QLSDLGDLHAIHKLSDHM 568
+L GD+ L M
Sbjct: 572 ELCVKGDIQKAWLLFSRM 589
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 116/263 (44%), Gaps = 11/263 (4%)
Query: 300 LVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFE--FMRT 357
++ G+ R R R + +++ + + G +P +N+ LD ++ E +D+ F R
Sbjct: 118 IIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDV-----LVKEDIDIAREFFTRK 172
Query: 358 KGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGK 417
++ TY I++ L+ +R+ + FKL+ M +SG P+ Y ++ +C GK
Sbjct: 173 MMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGK 232
Query: 418 IDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNM 477
+ A + EM P+ VT+N + C+ +K +++ L + L +P V T
Sbjct: 233 VGRARSLMSEMKE----PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTK 288
Query: 478 LISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKG 537
++ + A E + +E +G +D +++G K A E+ KG
Sbjct: 289 VMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKG 348
Query: 538 IKLPYKKFDSFLIQLSDLGDLHA 560
+ ++ + D+G L +
Sbjct: 349 YLPNVETYNLLIAGYCDVGMLDS 371
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 133/301 (44%), Gaps = 6/301 (1%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPT 311
+ +P++ F L++ LC V A L +M + + Y ++ G C++
Sbjct: 2 VETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRM---VEEGHQPYGTIINGLCKMGDTE 58
Query: 312 RGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYA 371
+ LL +M + + YN +D CK G A +LF M KG P TY+
Sbjct: 59 SALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIF---PDVITYS 115
Query: 372 IMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNK 431
MI + ++ R + +L+ MI PDV T+ +I + GK+ EA + +M +
Sbjct: 116 GMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR 175
Query: 432 GYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGA 491
G P +TYN + C + +A ++ M C P V T++ LI+ + + D
Sbjct: 176 GIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNG 235
Query: 492 FETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQ 551
E + EM +RG +T TY +I G + A LL +I+ G+ Y F S L
Sbjct: 236 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLAS 295
Query: 552 L 552
L
Sbjct: 296 L 296
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 80/183 (43%), Gaps = 5/183 (2%)
Query: 393 MISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKK 452
M+ +GC PDV T+ ++ G+C G++ +A ++ M +G+ P Y + LC
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 453 SEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCV 512
+E AL L +M E V YN +I + A + EM +G D TY
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 513 MIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKL-SDHMRKF 571
MI+ + +A LL ++I + I F + + L G + ++ D +R+
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 572 YNP 574
P
Sbjct: 177 IFP 179
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 145/302 (48%), Gaps = 6/302 (1%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLL 317
P +L L + A ++ + + + YN ++ + R ++ +L+
Sbjct: 189 PNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELV 248
Query: 318 EEMIQLGHRPDNFTYNTALDTYCKAGMITE--AVDLFEFMRTKGSTISSPTAKTYAIMIV 375
+ M Q G PD ++NT ++ K+G +T AV+L + +R G P A TY ++
Sbjct: 249 DAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGL---RPDAITYNTLLS 305
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
+++ ++ K+ M + C PD+ TY +I CG EA + E+ KG+ P
Sbjct: 306 ACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFP 365
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
D VTYN L + +E+ ++Y +M ++ TYN +I M+ + D A + +
Sbjct: 366 DAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLY 425
Query: 496 QEMEK-RGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSD 554
++M+ G N D TY V+I+ L N+T EA +L+ E+++ GIK + + + + +
Sbjct: 426 KDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAK 485
Query: 555 LG 556
G
Sbjct: 486 AG 487
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 124/247 (50%), Gaps = 3/247 (1%)
Query: 255 KTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRG 313
+ QP++ +N ++ +C L AE L+ ++ K +A TYN L++ + R R+ +
Sbjct: 327 RCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKV 386
Query: 314 MKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIM 373
++ ++M ++G D TYNT + Y K G + A+ L++ M KG + +P A TY ++
Sbjct: 387 KEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDM--KGLSGRNPDAITYTVL 444
Query: 374 IVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGY 433
I +L + +R E LM M+ G P + TY +I G GK +EA M G
Sbjct: 445 IDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGT 504
Query: 434 PPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFE 493
PD + Y+ L VL ++ +A LY MI PS Y ++I + + D +
Sbjct: 505 KPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQK 564
Query: 494 TWQEMEK 500
T ++ME+
Sbjct: 565 TIRDMEE 571
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 164/365 (44%), Gaps = 21/365 (5%)
Query: 206 RIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEKY---------LTHVQKFAKKKRIRVKT 256
R+V +L + R N+ ++ VE+ ++ + KF+K + +
Sbjct: 192 RMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAM 251
Query: 257 Q-----PEINAFNLLLDALCKCCLV--EYAEGLYKKMRKI-INTNAETYNILVFGWCRVR 308
+ P++ +FN L++A K + A L +R + +A TYN L+ R
Sbjct: 252 RQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDS 311
Query: 309 SPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAK 368
+ +K+ E+M +PD +TYN + Y + G+ EA LF + KG P A
Sbjct: 312 NLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFF---PDAV 368
Query: 369 TYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEM 428
TY ++ A+ E+ ++ M G D TY II G++D A + ++M
Sbjct: 369 TYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDM 428
Query: 429 -GNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDD 487
G G PD +TY + L ++ EA L M+++ P++QTY+ LI + +
Sbjct: 429 KGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGK 488
Query: 488 PDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDS 547
+ A +T+ M + G D Y VM++ L N+T +A L ++I+ G Y ++
Sbjct: 489 REEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYEL 548
Query: 548 FLIQL 552
++ L
Sbjct: 549 MILGL 553
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 143/326 (43%), Gaps = 12/326 (3%)
Query: 253 RVKTQPEINAFNL--------LLDALCKCCLVEYAEGLYKKMRKIINT-NAETYNILVFG 303
+V Q E F+ +++A K L + AE + +R+ T + +T+N L+
Sbjct: 737 QVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSA 796
Query: 304 WCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTIS 363
+ + R + M++ G P + N L C G + E + E ++ G IS
Sbjct: 797 YAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKIS 856
Query: 364 SPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYK 423
+ +M+ A+ + E K+ M ++G LP + Y+ +IE +C ++ +A
Sbjct: 857 K---SSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEI 913
Query: 424 FLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFF 483
+ EM + ++ +N L++ + ++ +++Y R+ E P TYN LI M+
Sbjct: 914 MVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYC 973
Query: 484 EMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYK 543
P+ + Q+M G + DTY +I E+A L EE+++KG+KL
Sbjct: 974 RDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRS 1033
Query: 544 KFDSFLIQLSDLGDLHAIHKLSDHMR 569
+ + + D G KL M+
Sbjct: 1034 FYHTMMKISRDSGSDSKAEKLLQMMK 1059
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 135/313 (43%), Gaps = 4/313 (1%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKL 316
P++ +N L+ A +C E A ++ M R + E+ NIL+ C +
Sbjct: 785 PDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVV 844
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
+EE+ +G + + LD + +AG I E ++ M+ G PT + Y +MI
Sbjct: 845 VEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYL---PTIRLYRMMIEL 901
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
L + R+ + ++ M + ++ + +++ + + + + G PD
Sbjct: 902 LCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPD 961
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQ 496
TYN + + C +++ EE L +M L P + TY LIS F + + A + ++
Sbjct: 962 ETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFE 1021
Query: 497 EMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLG 556
E+ +G LD Y M++ + +A LL+ + N GI+ ++ S G
Sbjct: 1022 ELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSG 1081
Query: 557 DLHAIHKLSDHMR 569
+ K+ +++
Sbjct: 1082 NPQEAEKVLSNLK 1094
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 121/291 (41%), Gaps = 12/291 (4%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKL 316
P I + ++++ LCK V AE + +M + +N ++ + + + +++
Sbjct: 890 PTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQV 949
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
+ + + G PD TYNT + YC+ E L + MR G P TY +I
Sbjct: 950 YQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGL---DPKLDTYKSLISA 1006
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
+ +E+ +L ++S G D + Y +++ G +A K L+ M N G P
Sbjct: 1007 FGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPT 1066
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRM----IELRCIPSVQTYNMLISMFFEMDDPDGAF 492
+ T + + + +EA K+ + +EL +P Y+ +I + D +
Sbjct: 1067 LATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLP----YSSVIDAYLRSKDYNSGI 1122
Query: 493 ETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYK 543
E EM+K G D + + + E LL+ + + G LP +
Sbjct: 1123 ERLLEMKKEGLEPDHRIWTCFVRAASFSKEKIEVMLLLKALEDIGFDLPIR 1173
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/286 (19%), Positives = 120/286 (41%), Gaps = 4/286 (1%)
Query: 265 LLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKLLEEMIQL 323
L+LDA + + + +Y M+ Y +++ C+ + ++ EM +
Sbjct: 862 LMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEA 921
Query: 324 GHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRM 383
+ + +N+ L Y + V +++ ++ G P TY +I+ ++ R
Sbjct: 922 NFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGL---EPDETTYNTLIIMYCRDRRP 978
Query: 384 EECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCF 443
EE + LM M + G P + TYK +I +++A + EE+ +KG D Y+
Sbjct: 979 EEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTM 1038
Query: 444 LRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGC 503
+++ D+ +A KL M P++ T ++L+ + +P A + ++
Sbjct: 1039 MKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEV 1098
Query: 504 NLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFL 549
L T Y +I+ L E+ +G++ ++ + F+
Sbjct: 1099 ELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFV 1144
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 98/227 (43%), Gaps = 7/227 (3%)
Query: 348 AVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPD-VTTYK 406
A+++FE++ + SP A+ A ++ L + + +E + + + + D V Y
Sbjct: 174 ALEVFEWLNLR--HWHSPNARMVAAILGVLGRWN--QESLAVEIFTRAEPTVGDRVQVYN 229
Query: 407 DIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFL--RVLCDNKKSEEALKLYGRMI 464
++ GK +A + ++ M +G PD++++N + R+ A++L +
Sbjct: 230 AMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVR 289
Query: 465 ELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTE 524
P TYN L+S + DGA + +++ME C D TY MI C
Sbjct: 290 NSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAA 349
Query: 525 EACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMRKF 571
EA L E+ KG ++S L + + + ++ M+K
Sbjct: 350 EAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKM 396
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 174/407 (42%), Gaps = 38/407 (9%)
Query: 167 IAFRFFTWAGNQENYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVE 226
+A R F W Q++Y + N ++ I+ S K + +M + ++ S
Sbjct: 153 LALRAFDWFMKQKDY--QSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFS----- 205
Query: 227 VLMTILRKYTEKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEY-------- 278
L Y+ Y + + FA R R +N F + + CK L+ Y
Sbjct: 206 -----LDVYS--YTSLISAFANSGRYR----EAVNVFKKMEEDGCKPTLITYNVILNVFG 254
Query: 279 --------AEGLYKKMRK-IINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDN 329
L +KM+ I +A TYN L+ R ++ EEM G D
Sbjct: 255 KMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDK 314
Query: 330 FTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKL 389
TYN LD Y K+ EA+ + M G SP+ TY +I A++ ++E +L
Sbjct: 315 VTYNALLDVYGKSHRPKEAMKVLNEMVLNGF---SPSIVTYNSLISAYARDGMLDEAMEL 371
Query: 390 MGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCD 449
M G PDV TY ++ G GK++ A EEM N G P+I T+N F+++ +
Sbjct: 372 KNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGN 431
Query: 450 NKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDT 509
K E +K++ + P + T+N L+++F + ++EM++ G + +T
Sbjct: 432 RGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERET 491
Query: 510 YCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLG 556
+ +I C E+A ++ +++ G+ +++ L L+ G
Sbjct: 492 FNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGG 538
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 142/312 (45%), Gaps = 4/312 (1%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKL 316
P+ +N L+ + L + A ++++M+ + + TYN L+ + + P MK+
Sbjct: 277 PDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKV 336
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
L EM+ G P TYN+ + Y + GM+ EA++L M KG+ P TY ++
Sbjct: 337 LNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGT---KPDVFTYTTLLSG 393
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
+ ++E + M ++GC P++ T+ I+ GK E K +E+ G PD
Sbjct: 394 FERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPD 453
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQ 496
IVT+N L V N E ++ M +P +T+N LIS + + A ++
Sbjct: 454 IVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYR 513
Query: 497 EMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLG 556
M G D TY ++ L E++ +L E+ + K + S L ++
Sbjct: 514 RMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGK 573
Query: 557 DLHAIHKLSDHM 568
++ +H L++ +
Sbjct: 574 EIGLMHSLAEEV 585
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 114/247 (46%), Gaps = 6/247 (2%)
Query: 324 GHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQ-NDR 382
G D ++Y + + + +G EAV++F+ M G PT TY +++ +
Sbjct: 203 GFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGC---KPTLITYNVILNVFGKMGTP 259
Query: 383 MEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKI-DEAYKFLEEMGNKGYPPDIVTYN 441
+ L+ M S G PD TY +I C G + EA + EEM G+ D VTYN
Sbjct: 260 WNKITSLVEKMKSDGIAPDAYTYNTLIT-CCKRGSLHQEAAQVFEEMKAAGFSYDKVTYN 318
Query: 442 CFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKR 501
L V + + +EA+K+ M+ PS+ TYN LIS + D A E +M ++
Sbjct: 319 ALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEK 378
Query: 502 GCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAI 561
G D TY ++ G K E A S+ EE+ N G K F++F+ + G +
Sbjct: 379 GTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEM 438
Query: 562 HKLSDHM 568
K+ D +
Sbjct: 439 MKIFDEI 445
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 128/323 (39%), Gaps = 39/323 (12%)
Query: 249 KKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRV 307
K+ R PE FN L+ A +C E A +Y++M + + TYN ++ R
Sbjct: 478 KEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARG 537
Query: 308 RSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYC--------------------------- 340
+ K+L EM +P+ TY + L Y
Sbjct: 538 GMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLL 597
Query: 341 --------KAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGY 392
K ++ EA F ++ +G SP T M+ + + + ++ Y
Sbjct: 598 KTLVLVCSKCDLLPEAERAFSELKERGF---SPDITTLNSMVSIYGRRQMVAKANGVLDY 654
Query: 393 MISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKK 452
M G P + TY ++ ++ + L E+ KG PDI++YN + C N +
Sbjct: 655 MKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTR 714
Query: 453 SEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCV 512
+A +++ M +P V TYN I + + A + M K GC + +TY
Sbjct: 715 MRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNS 774
Query: 513 MIEGLFNCNKTEEACSLLEEVIN 535
+++G N+ +EA +E++ N
Sbjct: 775 IVDGYCKLNRKDEAKLFVEDLRN 797
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 119/293 (40%), Gaps = 4/293 (1%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKL 316
P+I +N LL + + G++K+M++ ET+N L+ + R S + M +
Sbjct: 452 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTV 511
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
M+ G PD TYNT L + GM ++ + M P TY ++
Sbjct: 512 YRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEME---DGRCKPNELTYCSLLHA 568
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
A + L + S P K ++ C + EA + E+ +G+ PD
Sbjct: 569 YANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPD 628
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQ 496
I T N + + + +A + M E PS+ TYN L+ M D + E +
Sbjct: 629 ITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILR 688
Query: 497 EMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFL 549
E+ +G D +Y +I + +A + E+ N GI +++F+
Sbjct: 689 EILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFI 741
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 133/288 (46%), Gaps = 8/288 (2%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSP 310
+ + P + FN L++ LC V A L KM K ++ + TY +V G C++
Sbjct: 218 VEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDT 277
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
+ LL +M + +PD Y+ +D CK G ++A LF M KG +P TY
Sbjct: 278 KSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG---IAPNVFTY 334
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGN 430
MI R + +L+ MI PDV T+ +I GK+ EA K +EM +
Sbjct: 335 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLH 394
Query: 431 KGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDG 490
+ PD VTYN + C + + ++A M +L P V T+N +I ++ D
Sbjct: 395 RCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDE 450
Query: 491 AFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGI 538
+ +E+ +RG +T TY +I G + A L +E+I+ G+
Sbjct: 451 GMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 498
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 129/275 (46%), Gaps = 8/275 (2%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMK 315
+P++ ++ ++D LCK A+ L+ +M K I N TYN ++ G+C + +
Sbjct: 293 KPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQR 352
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
LL +MI+ PD T+N + K G + EA L + M + P TY MI
Sbjct: 353 LLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHR---CIFPDTVTYNSMIY 409
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
+++R ++ + M S PDV T+ II+ C ++DE + L E+ +G
Sbjct: 410 GFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVA 465
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
+ TYN + C+ A L+ MI P T N+L+ F E + + A E +
Sbjct: 466 NTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF 525
Query: 496 QEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLL 530
+ ++ +LDT Y ++I G+ +K +EA L
Sbjct: 526 EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 560
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 135/305 (44%), Gaps = 13/305 (4%)
Query: 249 KKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRV 307
+ I + P++ FN L+ A K + AE L +M + I + TYN +++G+C+
Sbjct: 355 RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKH 414
Query: 308 RSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTA 367
+ M L PD T+NT +D YC+A + E + L + +G ++ T
Sbjct: 415 NRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTT- 469
Query: 368 KTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEE 427
Y +I + D + L MIS G PD T ++ G C K++EA + E
Sbjct: 470 --YNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 527
Query: 428 MGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDD 487
+ D V YN + +C K +EA L+ + P VQTYN++IS F
Sbjct: 528 IQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA 587
Query: 488 PDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDS 547
A + +M+ G D TY +I G + +++ L+ E+ + G D+
Sbjct: 588 ISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGF-----SGDA 642
Query: 548 FLIQL 552
F I++
Sbjct: 643 FTIKM 647
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 123/275 (44%), Gaps = 13/275 (4%)
Query: 277 EYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTA 335
+ A LY+KM + I N ++NIL+ +C + + ++ +LG +PD T+NT
Sbjct: 123 DVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTL 182
Query: 336 LDTYCKAGMITEAVDLFEFMRTKGSTIS------------SPTAKTYAIMIVTLAQNDRM 383
L C I+EA+ LF +M G + +P T+ +I L R+
Sbjct: 183 LHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRV 242
Query: 384 EECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCF 443
E L+ M+ G DV TY I+ G+C G A L +M PD+V Y+
Sbjct: 243 LEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAI 302
Query: 444 LRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGC 503
+ LC + +A L+ M+E P+V TYN +I F A ++M +R
Sbjct: 303 IDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI 362
Query: 504 NLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGI 538
N D T+ +I K EA L +E++++ I
Sbjct: 363 NPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCI 397
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 142/314 (45%), Gaps = 10/314 (3%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKL 316
P + +N ++D C A+ L + M + IN + T+N L+ + KL
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
+EM+ PD TYN+ + +CK +A +F+ M +SP T+ +I
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM-------ASPDVVTFNTIIDV 441
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
+ R++E +L+ + G + + TTY +I G C ++ A +EM + G PD
Sbjct: 442 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIP-SVQTYNMLISMFFEMDDPDGAFETW 495
+T N L C+N+K EEAL+L+ +I++ I YN++I + D A++ +
Sbjct: 502 TITCNILLYGFCENEKLEEALELF-EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 560
Query: 496 QEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDL 555
+ G D TY VMI G + +A L ++ + G + +++ +
Sbjct: 561 CSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKA 620
Query: 556 GDLHAIHKLSDHMR 569
G++ +L MR
Sbjct: 621 GEIDKSIELISEMR 634
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 145/351 (41%), Gaps = 26/351 (7%)
Query: 195 LSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVE---VLMTILRKYTEKYLTHVQKFAKKKR 251
L S + K D DYM R V+ V+ +R + + + +R
Sbjct: 77 LKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRR 136
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWC---RV 307
I + I +FN+L+ C C + ++ + K+ K+ + T+N L+ G C R+
Sbjct: 137 IPLN----IYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRI 192
Query: 308 RSP------------TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFM 355
+ L ++M+++G P T+NT ++ C G + EA L M
Sbjct: 193 SEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKM 252
Query: 356 RTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLC 415
KG I TY ++ + + + L+ M + PDV Y II+ +C
Sbjct: 253 VGKGLHID---VVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKD 309
Query: 416 GKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTY 475
G +A EM KG P++ TYNC + C + +A +L MIE P V T+
Sbjct: 310 GHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTF 369
Query: 476 NMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEA 526
N LIS + A + EM R DT TY MI G N+ ++A
Sbjct: 370 NALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA 420
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 98/229 (42%), Gaps = 33/229 (14%)
Query: 256 TQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGM 314
P++ FN ++D C+ V+ L +++ R+ + N TYN L+ G+C V +
Sbjct: 428 ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQ 487
Query: 315 KLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRT----------------- 357
L +EMI G PD T N L +C+ + EA++LFE ++
Sbjct: 488 DLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGM 547
Query: 358 -KGSTISS--------------PTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDV 402
KGS + P +TY +MI + + L M +G PD
Sbjct: 548 CKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDN 607
Query: 403 TTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNK 451
+TY +I G G+ID++ + + EM + G+ D T ++ D +
Sbjct: 608 STYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITDGR 656
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 69/130 (53%), Gaps = 5/130 (3%)
Query: 262 AFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMKLLEEM 320
A+N+++ +CK V+ A L+ + + + +TYN+++ G+C + + L +M
Sbjct: 539 AYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKM 598
Query: 321 IQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQN 380
GH PDN TYNT + KAG I ++++L MR+ G + + T K M+ L +
Sbjct: 599 KDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK----MVADLITD 654
Query: 381 DRMEECFKLM 390
R+++ F M
Sbjct: 655 GRLDKSFSDM 664
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 109/265 (41%), Gaps = 30/265 (11%)
Query: 308 RSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSP-- 365
R +G K L + Q+ + + Y K+ + +A+D F++M S P
Sbjct: 53 RVAEKGTKSLPSLTQVTFEGEELKLKSG-SHYFKS--LDDAIDFFDYM-----VRSRPFY 104
Query: 366 TAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFL 425
TA +I + +R + L M ++ ++ +I+ C C K+ +
Sbjct: 105 TAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTF 164
Query: 426 EEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEM 485
++ G+ PD+VT+N L LC + EAL L+G M+E + +V ++ ++ +
Sbjct: 165 GKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEI---- 220
Query: 486 DDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKF 545
G T+ +I GL + EA +L+ +++ KG+ + +
Sbjct: 221 ----------------GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 264
Query: 546 DSFLIQLSDLGDLHAIHKLSDHMRK 570
+ + + +GD + L M +
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEE 289
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 149/320 (46%), Gaps = 39/320 (12%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSP 310
I++ P++ + +L+D L K L+ +A KM + I N +N L+ GWCR+
Sbjct: 453 IKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRF 512
Query: 311 TRGMKL----------------------------LEE-------MIQLGHRPDNFTYNTA 335
+K+ LEE M ++G PD Y T
Sbjct: 513 DEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTL 572
Query: 336 LDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMIS 395
+D +CK T + LF+ M+ + IS+ A ++I L + R+E+ K +I
Sbjct: 573 IDAFCKHMKPTIGLQLFDLMQR--NKISADIA-VCNVVIHLLFKCHRIEDASKFFNNLIE 629
Query: 396 SGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEE 455
PD+ TY +I G C ++DEA + E + + P+ VT + VLC N +
Sbjct: 630 GKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDG 689
Query: 456 ALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIE 515
A++++ M E P+ TY L+ F + D +G+F+ ++EM+++G + +Y ++I+
Sbjct: 690 AIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIID 749
Query: 516 GLFNCNKTEEACSLLEEVIN 535
GL + +EA ++ + I+
Sbjct: 750 GLCKRGRVDEATNIFHQAID 769
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 132/283 (46%), Gaps = 4/283 (1%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKL 316
P + F L++ CK ++ A L+K M ++ I + Y+ L+ G+ + G KL
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
+ + G + D +++ +D Y K+G + A +++ M +G SP TY I+I
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGI---SPNVVTYTILIKG 400
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
L Q+ R+ E F + G ++ G P + TY +I+G C CG + + E+M GYPPD
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPD 460
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQ 496
+V Y + L A++ +M+ +V +N LI + ++ D A + ++
Sbjct: 461 VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFR 520
Query: 497 EMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
M G D T+ ++ + EEA L + G++
Sbjct: 521 LMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLE 563
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 123/277 (44%), Gaps = 4/277 (1%)
Query: 259 EINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMKLL 317
++ F+ +D K + A +YK+M + I+ N TY IL+ G C+ +
Sbjct: 355 DVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMY 414
Query: 318 EEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTL 377
++++ G P TY++ +D +CK G + L+E M G P Y +++ L
Sbjct: 415 GQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY---PPDVVIYGVLVDGL 471
Query: 378 AQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDI 437
++ M + M+ +V + +I+G C + DEA K MG G PD+
Sbjct: 472 SKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDV 531
Query: 438 VTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQE 497
T+ +RV + EEAL L+ RM ++ P Y LI F + P + +
Sbjct: 532 ATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDL 591
Query: 498 MEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVI 534
M++ + D V+I LF C++ E+A +I
Sbjct: 592 MQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLI 628
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 116/258 (44%), Gaps = 4/258 (1%)
Query: 250 KRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVR 308
+ ++ +P+ A+ L+DA CK L+ M R I+ + N+++ +
Sbjct: 556 RMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCH 615
Query: 309 SPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAK 368
K +I+ PD TYNT + YC + EA +FE ++ T P
Sbjct: 616 RIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKV---TPFGPNTV 672
Query: 369 TYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEM 428
T I+I L +N+ M+ ++ M G P+ TY +++ I+ ++K EEM
Sbjct: 673 TLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEM 732
Query: 429 GNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDP 488
KG P IV+Y+ + LC + +EA ++ + I+ + +P V Y +LI + ++
Sbjct: 733 QEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRL 792
Query: 489 DGAFETWQEMEKRGCNLD 506
A ++ M + G D
Sbjct: 793 VEAALLYEHMLRNGVKPD 810
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 108/235 (45%), Gaps = 3/235 (1%)
Query: 315 KLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMI 374
+LL ++ G P+ T+ T ++ +CK G + A DLF+ M +G P Y+ +I
Sbjct: 272 RLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGI---EPDLIAYSTLI 328
Query: 375 VTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYP 434
+ + KL + G DV + I+ G + A + M +G
Sbjct: 329 DGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGIS 388
Query: 435 PDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFET 494
P++VTY ++ LC + + EA +YG++++ PS+ TY+ LI F + + F
Sbjct: 389 PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFAL 448
Query: 495 WQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFL 549
+++M K G D Y V+++GL A +++ + I+L F+S +
Sbjct: 449 YEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLI 503
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 127/315 (40%), Gaps = 4/315 (1%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMK 315
+P I ++ L+D CKC + LY+ M K+ + Y +LV G + M+
Sbjct: 423 EPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMR 482
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
+M+ R + +N+ +D +C+ EA+ +F M G P T+ ++
Sbjct: 483 FSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGI---KPDVATFTTVMR 539
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
R+EE L M G PD Y +I+ C K + + M
Sbjct: 540 VSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISA 599
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
DI N + +L + E+A K + +IE + P + TYN +I + + D A +
Sbjct: 600 DIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIF 659
Query: 496 QEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDL 555
+ ++ +T T ++I L N + A + + KG K + + S
Sbjct: 660 ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKS 719
Query: 556 GDLHAIHKLSDHMRK 570
D+ KL + M++
Sbjct: 720 VDIEGSFKLFEEMQE 734
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 109/228 (47%), Gaps = 8/228 (3%)
Query: 340 CKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCL 399
C+ GM+ +A+++F + G I P Y M+ +L +DR++ + G
Sbjct: 157 CRYGMVDKALEIFVYSTQLGVVI--PQDSVYR-MLNSLIGSDRVDLIADHFDKLCRGGIE 213
Query: 400 PD-VTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALK 458
P V+ + +++ + G++ +A F + +G+ IV+ N L+ L ++ E A +
Sbjct: 214 PSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQ-IEVASR 272
Query: 459 LYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLF 518
L +++ P+V T+ LI+ F + + D AF+ ++ ME+RG D Y +I+G F
Sbjct: 273 LLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYF 332
Query: 519 NCNKTEEACSLLEEVINKGIKLPYKKFDSFL---IQLSDLGDLHAIHK 563
L + ++KG+KL F S + ++ DL ++K
Sbjct: 333 KAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYK 380
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/268 (19%), Positives = 117/268 (43%), Gaps = 7/268 (2%)
Query: 317 LEEMIQLGHRPDNFT-YNTALDT-YCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMI 374
+++ + G P + + LD +CK G +T+A+D + +G + + +
Sbjct: 204 FDKLCRGGIEPSGVSAHGFVLDALFCK-GEVTKALDFHRLVMERGFRVGIVSCNK----V 258
Query: 375 VTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYP 434
+ D++E +L+ ++ G P+V T+ +I G C G++D A+ + M +G
Sbjct: 259 LKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIE 318
Query: 435 PDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFET 494
PD++ Y+ + KL+ + + V ++ I ++ + D A
Sbjct: 319 PDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVV 378
Query: 495 WQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSD 554
++ M +G + + TY ++I+GL + EA + +++ +G++ + S +
Sbjct: 379 YKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCK 438
Query: 555 LGDLHAIHKLSDHMRKFYNPAMARRYAI 582
G+L + L + M K P Y +
Sbjct: 439 CGNLRSGFALYEDMIKMGYPPDVVIYGV 466
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 133/288 (46%), Gaps = 8/288 (2%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSP 310
+ + P + FN L++ LC V A L KM K ++ + TY +V G C++
Sbjct: 218 VEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDT 277
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
+ LL +M + +PD Y+ +D CK G ++A LF M KG +P TY
Sbjct: 278 KSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG---IAPNVFTY 334
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGN 430
MI R + +L+ MI PDV T+ +I GK+ EA K +EM +
Sbjct: 335 NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLH 394
Query: 431 KGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDG 490
+ PD VTYN + C + + ++A M +L P V T+N +I ++ D
Sbjct: 395 RCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDE 450
Query: 491 AFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGI 538
+ +E+ +RG +T TY +I G + A L +E+I+ G+
Sbjct: 451 GMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 498
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 147/316 (46%), Gaps = 12/316 (3%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMK 315
+P++ ++ ++D LCK A+ L+ +M K I N TYN ++ G+C + +
Sbjct: 293 KPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQR 352
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
LL +MI+ PD T+N + K G + EA L + M + P TY MI
Sbjct: 353 LLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHR---CIFPDTVTYNSMIY 409
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
+++R ++ + M S PDV T+ II+ C ++DE + L E+ +G
Sbjct: 410 GFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVA 465
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
+ TYN + C+ A L+ MI P T N+L+ F E + + A E +
Sbjct: 466 NTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF 525
Query: 496 QEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQL--- 552
+ ++ +LDT Y ++I G+ +K +EA L + G++ + ++ +
Sbjct: 526 EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGK 585
Query: 553 SDLGDLHAI-HKLSDH 567
S + D + + HK+ D+
Sbjct: 586 SAISDANVLFHKMKDN 601
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 142/314 (45%), Gaps = 10/314 (3%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKL 316
P + +N ++D C A+ L + M + IN + T+N L+ + KL
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
+EM+ PD TYN+ + +CK +A +F+ M +SP T+ +I
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM-------ASPDVVTFNTIIDV 441
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
+ R++E +L+ + G + + TTY +I G C ++ A +EM + G PD
Sbjct: 442 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPD 501
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIP-SVQTYNMLISMFFEMDDPDGAFETW 495
+T N L C+N+K EEAL+L+ +I++ I YN++I + D A++ +
Sbjct: 502 TITCNILLYGFCENEKLEEALELF-EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 560
Query: 496 QEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDL 555
+ G D TY VMI G + +A L ++ + G + +++ +
Sbjct: 561 CSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKA 620
Query: 556 GDLHAIHKLSDHMR 569
G++ +L MR
Sbjct: 621 GEIDKSIELISEMR 634
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 123/275 (44%), Gaps = 13/275 (4%)
Query: 277 EYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTA 335
+ A LY+KM + I N ++NIL+ +C + + ++ +LG +PD T+NT
Sbjct: 123 DVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTL 182
Query: 336 LDTYCKAGMITEAVDLFEFMRTKGSTIS------------SPTAKTYAIMIVTLAQNDRM 383
L C I+EA+ LF +M G + +P T+ +I L R+
Sbjct: 183 LHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRV 242
Query: 384 EECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCF 443
E L+ M+ G DV TY I+ G+C G A L +M PD+V Y+
Sbjct: 243 LEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAI 302
Query: 444 LRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGC 503
+ LC + +A L+ M+E P+V TYN +I F A ++M +R
Sbjct: 303 IDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI 362
Query: 504 NLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGI 538
N D T+ +I K EA L +E++++ I
Sbjct: 363 NPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCI 397
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 145/351 (41%), Gaps = 26/351 (7%)
Query: 195 LSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVE---VLMTILRKYTEKYLTHVQKFAKKKR 251
L S + K D DYM R V+ V+ +R + + + +R
Sbjct: 77 LKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRR 136
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWC---RV 307
I + I +FN+L+ C C + ++ + K+ K+ + T+N L+ G C R+
Sbjct: 137 IPLN----IYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRI 192
Query: 308 RSP------------TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFM 355
+ L ++M+++G P T+NT ++ C G + EA L M
Sbjct: 193 SEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKM 252
Query: 356 RTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLC 415
KG I TY ++ + + + L+ M + PDV Y II+ +C
Sbjct: 253 VGKGLHID---VVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKD 309
Query: 416 GKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTY 475
G +A EM KG P++ TYNC + C + +A +L MIE P V T+
Sbjct: 310 GHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTF 369
Query: 476 NMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEA 526
N LIS + A + EM R DT TY MI G N+ ++A
Sbjct: 370 NALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA 420
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 132/297 (44%), Gaps = 10/297 (3%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLL 317
P+ +N ++ CK + A+ ++ M + + T+N ++ +CR + GM+LL
Sbjct: 399 PDTVTYNSMIYGFCKHNRFDDAKHMFDLM---ASPDVVTFNTIIDVYCRAKRVDEGMQLL 455
Query: 318 EEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTL 377
E+ + G + TYNT + +C+ + A DLF+ M + G P T I++
Sbjct: 456 REISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC---PDTITCNILLYGF 512
Query: 378 AQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDI 437
+N+++EE +L + S D Y II G+C K+DEA+ + G PD+
Sbjct: 513 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 572
Query: 438 VTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQE 497
TYN + C +A L+ +M + P TYN LI + + D + E E
Sbjct: 573 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 632
Query: 498 MEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSD 554
M G D + + + C ++E ++E + I ++++L++
Sbjct: 633 MRSNG--FSGDAFTIKMAEEIICRVSDE--EIIENYLRPKINGETSSIPRYVVELAE 685
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 4/209 (1%)
Query: 256 TQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGM 314
P++ FN ++D C+ V+ L +++ R+ + N TYN L+ G+C V +
Sbjct: 428 ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQ 487
Query: 315 KLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMI 374
L +EMI G PD T N L +C+ + EA++LFE ++ S I T Y I+I
Sbjct: 488 DLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQM--SKIDLDTV-AYNIII 544
Query: 375 VTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYP 434
+ + +++E + L + G PDV TY +I G C I +A +M + G+
Sbjct: 545 HGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHE 604
Query: 435 PDIVTYNCFLRVLCDNKKSEEALKLYGRM 463
PD TYN +R + +++++L M
Sbjct: 605 PDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 109/265 (41%), Gaps = 30/265 (11%)
Query: 308 RSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSP-- 365
R +G K L + Q+ + + Y K+ + +A+D F++M S P
Sbjct: 53 RVAEKGTKSLPSLTQVTFEGEELKLKSG-SHYFKS--LDDAIDFFDYM-----VRSRPFY 104
Query: 366 TAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFL 425
TA +I + +R + L M ++ ++ +I+ C C K+ +
Sbjct: 105 TAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTF 164
Query: 426 EEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEM 485
++ G+ PD+VT+N L LC + EAL L+G M+E + +V ++ ++ +
Sbjct: 165 GKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEI---- 220
Query: 486 DDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKF 545
G T+ +I GL + EA +L+ +++ KG+ + +
Sbjct: 221 ----------------GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 264
Query: 546 DSFLIQLSDLGDLHAIHKLSDHMRK 570
+ + + +GD + L M +
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEE 289
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 182/437 (41%), Gaps = 53/437 (12%)
Query: 144 QLAIPLSTP-LVTGVLHRLRYDEKIAFRFFTWAGNQENYSHEPCAYNDMMDILS-----S 197
Q + L+ P L+ VL+ +R +IAFRFF W Q + A+ M++IL+ S
Sbjct: 77 QFRLLLTDPNLLIRVLNMIRVKPEIAFRFFNWIQRQSDVKQSRQAFAAMLEILAENDLMS 136
Query: 198 TKYKVKQFRI------VCDML---DYMKRKNKSTVPVEVLMTILRKYTEKYLTHVQKFAK 248
Y V + I + D+L + K + + + + + EK+L +K +
Sbjct: 137 EAYLVAERSIDLGMHEIDDLLIDGSFDKLIALKLLDLLLWVYTKKSMAEKFLLSFEKMIR 196
Query: 249 K------------------------------KRIRVKTQPEINAFNLLLDALCKCCLVEY 278
K I P + FN +LD+ K +E
Sbjct: 197 KGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLER 256
Query: 279 AEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALD 337
+ ++ +M R+ I + TYNIL+ G+ + + +M + G +++N ++
Sbjct: 257 VDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIE 316
Query: 338 TYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSG 397
YCK G+ +A + + M G PT TY I I L R+++ +L+ SS
Sbjct: 317 GYCKQGLFDDAWGVTDEMLNAGIY---PTTSTYNIYICALCDFGRIDDARELL----SSM 369
Query: 398 CLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEAL 457
PDV +Y ++ G GK EA +++ P IVTYN + LC++ E A
Sbjct: 370 AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQ 429
Query: 458 KLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGL 517
+L M P V TY L+ F + + A E + EM ++G D Y G
Sbjct: 430 RLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGE 489
Query: 518 FNCNKTEEACSLLEEVI 534
+++A L EE++
Sbjct: 490 LRLGDSDKAFRLHEEMV 506
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 134/283 (47%), Gaps = 9/283 (3%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMRK-IINTNAETYNILVFGWCRVRSPTRGMKL 316
P++ ++N L+ K A L+ +R I+ + TYN L+ G C + +L
Sbjct: 372 PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRL 431
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
EEM PD TY T + + K G ++ A ++++ M KG T A+ +
Sbjct: 432 KEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELR 491
Query: 377 LAQNDRMEECFKLMGYMISSGC-LPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
L +D+ F+L M+++ PD+T Y I+G+C G + +A +F ++ G P
Sbjct: 492 LGDSDK---AFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVP 548
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
D VTY +R +N + + A LY M+ R PSV TY +LI + + AF+
Sbjct: 549 DHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYS 608
Query: 496 QEMEKRGCNLDTDTYCVMIEGLFNCNKTEEA----CSLLEEVI 534
EM+KRG + T+ ++ G+ +EA C + EE I
Sbjct: 609 TEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGI 651
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 97/182 (53%), Gaps = 3/182 (1%)
Query: 297 YNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMR 356
YN+ + G C+V + + ++ ++ ++G PD+ TY T + Y + G A +L++ M
Sbjct: 518 YNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEML 577
Query: 357 TKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCG 416
K P+ TY ++I A+ R+E+ F+ M G P+V T+ ++ G+C G
Sbjct: 578 RKRLY---PSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAG 634
Query: 417 KIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYN 476
IDEAY++L +M +G PP+ +Y + CD +K EE +KLY M++ P T+
Sbjct: 635 NIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHR 694
Query: 477 ML 478
L
Sbjct: 695 AL 696
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 110/245 (44%), Gaps = 12/245 (4%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKL 316
P++ + L+ K + A +Y +M RK I + Y G R+ + +L
Sbjct: 442 PDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRL 501
Query: 317 LEEMIQLGHR-PDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
EEM+ H PD YN +D CK G + +A+ EF R P TY +I
Sbjct: 502 HEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAI---EFQRKIFRVGLVPDHVTYTTVIR 558
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
+N + + L M+ P V TY +I G G++++A+++ EM +G P
Sbjct: 559 GYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRP 618
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
+++T+N L +C +EA + +M E P+ +Y MLIS + FE W
Sbjct: 619 NVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLIS-------KNCDFEKW 671
Query: 496 QEMEK 500
+E+ K
Sbjct: 672 EEVVK 676
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 130/284 (45%), Gaps = 3/284 (1%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMK 315
P I +N L+D LC+ +E A+ L ++M ++I + TY LV G+ + + + +
Sbjct: 406 HPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATE 465
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
+ +EM++ G +PD + Y T + G +A L E M + +P Y + I
Sbjct: 466 VYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEM--VATDHHAPDLTIYNVRID 523
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
L + + + + + G +PD TY +I G G+ A +EM K P
Sbjct: 524 GLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYP 583
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
++TY + + E+A + M + P+V T+N L+ + + D A+
Sbjct: 584 SVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYL 643
Query: 496 QEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
+ME+ G + +Y ++I + K EE L +E+++K I+
Sbjct: 644 CKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIE 687
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 128/307 (41%), Gaps = 7/307 (2%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLL 317
P + +N+ + ALC ++ A L M + +YN L+ G+ ++ L
Sbjct: 341 PTTSTYNIYICALCDFGRIDDARELLSSMAA---PDVVSYNTLMHGYIKMGKFVEASLLF 397
Query: 318 EEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTL 377
+++ P TYNT +D C++G + A L E M T+ + P TY ++
Sbjct: 398 DDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQ---LIFPDVITYTTLVKGF 454
Query: 378 AQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEM-GNKGYPPD 436
+N + ++ M+ G PD Y G G D+A++ EEM + PD
Sbjct: 455 VKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPD 514
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQ 496
+ YN + LC +A++ ++ + +P TY +I + E A +
Sbjct: 515 LTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYD 574
Query: 497 EMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLG 556
EM ++ TY V+I G + E+A E+ +G++ ++ L + G
Sbjct: 575 EMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAG 634
Query: 557 DLHAIHK 563
++ ++
Sbjct: 635 NIDEAYR 641
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 159/347 (45%), Gaps = 35/347 (10%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKM--RKIINTNAETYNILVFGWCRVRSPTRGMK 315
P + +N+L+D LCK + AE L+ +M R+++ + TYN L+ G+C+ +P + K
Sbjct: 212 PSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLI-TYNTLIDGYCKAGNPEKSFK 270
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPT--------- 366
+ E M P T+NT L KAGM+ +A ++ + M+ G + T
Sbjct: 271 VRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYS 330
Query: 367 -----------------------AKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVT 403
A T +I++ L + ++E+ +++G ++ G +P+
Sbjct: 331 SNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEV 390
Query: 404 TYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRM 463
Y +I+G C G + A +E M +G PD + YNC +R C+ + E A K +M
Sbjct: 391 IYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKM 450
Query: 464 IELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKT 523
PSV+TYN+LI + + D F+ +EME G + +Y +I L +K
Sbjct: 451 KLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKL 510
Query: 524 EEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMRK 570
EA + ++ ++G+ + ++ + G + + S M K
Sbjct: 511 LEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLK 557
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 156/365 (42%), Gaps = 42/365 (11%)
Query: 244 QKFAKKKRIRVK-TQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI------------- 289
+ F ++R++ +P + FN LL L K +VE AE + K+M+ +
Sbjct: 267 KSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILF 326
Query: 290 -----------------------INTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHR 326
+ NA T +IL+ C+ + ++L + G
Sbjct: 327 DGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLV 386
Query: 327 PDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEEC 386
P+ YNT +D YC+ G + A E M +G P Y +I + ME
Sbjct: 387 PNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGM---KPDHLAYNCLIRRFCELGEMENA 443
Query: 387 FKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRV 446
K + M G P V TY +I G + D+ + L+EM + G P++V+Y +
Sbjct: 444 EKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINC 503
Query: 447 LCDNKKSEEALKLYGRMIELRCI-PSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNL 505
LC K EA ++ R +E R + P V+ YNMLI + AF +EM K+G L
Sbjct: 504 LCKGSKLLEA-QIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIEL 562
Query: 506 DTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLS 565
+ TY +I+GL K EA LL E+ KG+K ++S + G++ L
Sbjct: 563 NLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALY 622
Query: 566 DHMRK 570
+ M++
Sbjct: 623 EEMKR 627
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 164/384 (42%), Gaps = 72/384 (18%)
Query: 254 VKTQPEINAF--NLLLDALCKCCLVEYAEG-LYKKMRKIINTNAETYNILVFGWCRVRSP 310
V + ++NA+ ++LL+ALCK +E AE L ++M K + N YN ++ G+CR
Sbjct: 346 VDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDL 405
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
+E M + G +PD+ YN + +C+ G + A M+ KG SP+ +TY
Sbjct: 406 VGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGV---SPSVETY 462
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDII--------------------- 409
I+I + ++CF ++ M +G +P+V +Y +I
Sbjct: 463 NILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMED 522
Query: 410 --------------EGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEE 455
+G C GKI++A++F +EM KG ++VTYN + L K E
Sbjct: 523 RGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSE 582
Query: 456 ALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIE 515
A L + P V TYN LIS + + ++EM++ G TY ++I
Sbjct: 583 AEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS 642
Query: 516 ---------------------------GLFNC----NKTEEACSLLEEVINKGIKLPYKK 544
G+ +C E+A +L +++I K I L
Sbjct: 643 LCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTT 702
Query: 545 FDSFLIQLSDLGDLHAIHKLSDHM 568
++S ++ +G L + L D M
Sbjct: 703 YNSLILGQLKVGKLCEVRSLIDEM 726
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 131/279 (46%), Gaps = 8/279 (2%)
Query: 256 TQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGM 314
P++ +N+L+D C +E A K+M +K I N TYN L+ G +
Sbjct: 525 VSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAE 584
Query: 315 KLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMI 374
LL E+ + G +PD FTYN+ + Y AG + + L+E M+ G PT KTY ++I
Sbjct: 585 DLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGI---KPTLKTYHLLI 641
Query: 375 VTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYP 434
+L + +E +L G M PD+ Y ++ + G +++A+ ++M K
Sbjct: 642 -SLCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIG 697
Query: 435 PDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFET 494
D TYN + K E L M P TYN+++ E+ D A+
Sbjct: 698 LDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVW 757
Query: 495 WQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEV 533
++EM+++G LD ++ GL +++EA ++ E+
Sbjct: 758 YREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 150/365 (41%), Gaps = 71/365 (19%)
Query: 220 KSTVPVEVLM-TILRKYTEKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEY 278
K VP EV+ T++ Y K + + + +P+ A+N L+ C+ +E
Sbjct: 383 KGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMEN 442
Query: 279 AEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALD 337
AE KM+ K ++ + ETYNIL+ G+ R + +L+EM G P+ +Y T ++
Sbjct: 443 AEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLIN 502
Query: 338 TYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSG 397
CK + EA + M +G SP + Y ++I ++E+ F+ M+ G
Sbjct: 503 CLCKGSKLLEAQIVKRDMEDRGV---SPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKG 559
Query: 398 CLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEAL 457
++ TY +I+G+ + GK+ EA L E+ KG PD+ TYN + + +
Sbjct: 560 IELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCI 619
Query: 458 KLYGRMIELRCIPSVQTYNMLIS------------MFFEMD------------------- 486
LY M P+++TY++LIS +F EM
Sbjct: 620 ALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHG 679
Query: 487 DPDGAFETWQEMEKRGCNLD-----------------------------------TDTYC 511
D + AF ++M ++ LD DTY
Sbjct: 680 DMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYN 739
Query: 512 VMIEG 516
++++G
Sbjct: 740 IIVKG 744
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 3/213 (1%)
Query: 326 RPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEE 385
RP F Y A+ K + + ++LF R K I P+ Y ++I L + RM +
Sbjct: 176 RPSKFMYGKAIQAAVKLSDVGKGLELFN--RMKHDRIY-PSVFIYNVLIDGLCKGKRMND 232
Query: 386 CFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLR 445
+L M++ LP + TY +I+G C G ++++K E M P ++T+N L+
Sbjct: 233 AEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLK 292
Query: 446 VLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNL 505
L E+A + M +L +P T+++L + + + A ++ G +
Sbjct: 293 GLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKM 352
Query: 506 DTDTYCVMIEGLFNCNKTEEACSLLEEVINKGI 538
+ T +++ L K E+A +L + KG+
Sbjct: 353 NAYTCSILLNALCKEGKIEKAEEILGREMAKGL 385
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 91/194 (46%), Gaps = 3/194 (1%)
Query: 344 MITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVT 403
MI+EA DLF +R +G P++ + +++ L + + + ++ S P
Sbjct: 124 MISEAADLFFALRNEGIY---PSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKF 180
Query: 404 TYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRM 463
Y I+ + + + M + P + YN + LC K+ +A +L+ M
Sbjct: 181 MYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEM 240
Query: 464 IELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKT 523
+ R +PS+ TYN LI + + +P+ +F+ + M+ T+ +++GLF
Sbjct: 241 LARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMV 300
Query: 524 EEACSLLEEVINKG 537
E+A ++L+E+ + G
Sbjct: 301 EDAENVLKEMKDLG 314
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 167/363 (46%), Gaps = 15/363 (4%)
Query: 201 KVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEK--YLTHVQKFAKKKRIRVKTQP 258
K + F V +L MK+ V +V T+L + + K ++ +K + R R +
Sbjct: 271 KQRDFSGVEGVLKVMKKD--GVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRER-GIES 327
Query: 259 EINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKLL 317
+++ + L+ C+ ++ A L+ ++ K ++ ++ TY L+ G C+V L+
Sbjct: 328 DVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILM 387
Query: 318 EEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTL 377
EM G +NT +D YC+ GM+ EA +++ M KG T T A L
Sbjct: 388 NEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRL 447
Query: 378 AQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDI 437
R +E + + M+ G +Y ++I+ C G ++EA + EM +KG P+
Sbjct: 448 K---RYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNA 504
Query: 438 VTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQE 497
+TYN + C K +EA KL M P TY LI D+ D A + E
Sbjct: 505 ITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSE 564
Query: 498 MEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGD 557
M +G + ++ TY VMI GL K++EA L +E+ KG + K + + +G
Sbjct: 565 MGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTAL------IGS 618
Query: 558 LHA 560
+H+
Sbjct: 619 MHS 621
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 130/309 (42%), Gaps = 4/309 (1%)
Query: 263 FNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMKLLEEMI 321
+ LL++ K + AE L+ +MR + I ++ Y L+ CR + R L +E+
Sbjct: 297 YTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELT 356
Query: 322 QLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQND 381
+ G P ++TY +D CK G + A L M++KG I T + +I +
Sbjct: 357 EKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNI---TQVVFNTLIDGYCRKG 413
Query: 382 RMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYN 441
++E + M G DV T I + DEA ++L M G V+Y
Sbjct: 414 MVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYT 473
Query: 442 CFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKR 501
+ V C EEA +L+ M P+ TYN++I + + A + ME
Sbjct: 474 NLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEAN 533
Query: 502 GCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAI 561
G + D+ TY +I G + +EA L E+ KG+ + + LS G
Sbjct: 534 GMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEA 593
Query: 562 HKLSDHMRK 570
L D M++
Sbjct: 594 FGLYDEMKR 602
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 134/308 (43%), Gaps = 4/308 (1%)
Query: 262 AFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMKLLEEM 320
+ ++++ LC+ VE ++ L K+ K I A TYN ++ + + R + +L+ M
Sbjct: 226 SLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVM 285
Query: 321 IQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQN 380
+ G + TY ++ K G +++A LF+ MR +G I S Y +I +
Sbjct: 286 KKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERG--IESD-VHVYTSLISWNCRK 342
Query: 381 DRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTY 440
M+ F L + G P TY +I+GVC G++ A + EM +KG V +
Sbjct: 343 GNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVF 402
Query: 441 NCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEK 500
N + C +EA +Y M + V T N + S F + D A + M +
Sbjct: 403 NTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMME 462
Query: 501 RGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHA 560
G L T +Y +I+ EEA L E+ +KG++ ++ + G +
Sbjct: 463 GGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKE 522
Query: 561 IHKLSDHM 568
KL +M
Sbjct: 523 ARKLRANM 530
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 107/234 (45%), Gaps = 7/234 (2%)
Query: 338 TYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSG 397
Y GM E + +F++M KG +I ++ + +V + R++ C ++ M+ SG
Sbjct: 163 VYVDNGMFEEGLRVFDYMVKKGLSIDE---RSCIVFLVAAKKRRRIDLCLEIFRRMVDSG 219
Query: 398 CLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEAL 457
V + ++EG+C G+++++ K ++E KG P+ TYN + +
Sbjct: 220 VKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVE 279
Query: 458 KLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGL 517
+ M + + + TY +L+ + + A + + EM +RG D Y +I
Sbjct: 280 GVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLIS-- 337
Query: 518 FNCNKT--EEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMR 569
+NC K + A L +E+ KG+ + + + + +G++ A L + M+
Sbjct: 338 WNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQ 391
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 133/287 (46%), Gaps = 9/287 (3%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSP 310
+ + +P++ + ++D+LCK V YA L+ +M I + Y LV G C
Sbjct: 169 VEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRW 228
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLF-EFMRTKGSTISSPTAKT 369
LL M + +PD T+N +D + K G +A +L+ E +R +P T
Sbjct: 229 RDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMS----IAPNIFT 284
Query: 370 YAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMG 429
Y +I ++E ++ M + GC PDV Y +I G C C K+D+A K EM
Sbjct: 285 YTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMS 344
Query: 430 NKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPD 489
KG + +TY ++ K A +++ M+ P+++TYN+L+
Sbjct: 345 QKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVK 404
Query: 490 GAFETWQEMEKR---GCNLDTDTYCVMIEGLFNCNKTEEACSLLEEV 533
A +++M+KR G + TY V++ GL K E+A + E++
Sbjct: 405 KALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM 451
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 142/326 (43%), Gaps = 4/326 (1%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKL 316
P I F LL+ + K + L ++ + ++ + T N+L+ +C+ P
Sbjct: 70 PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSF 129
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
L +M++LG PD T+ + ++ +C + EA+ + M G P Y +I +
Sbjct: 130 LGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI---KPDVVMYTTIIDS 186
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
L +N + L M + G PDV Y ++ G+C G+ +A L M + PD
Sbjct: 187 LCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPD 246
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQ 496
++T+N + K +A +LY MI + P++ TY LI+ F D A + +
Sbjct: 247 VITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFY 306
Query: 497 EMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLG 556
ME +GC D Y +I G C K ++A + E+ KG+ + + + +G
Sbjct: 307 LMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVG 366
Query: 557 DLHAIHKLSDHMRKFYNPAMARRYAI 582
+ ++ HM P R Y +
Sbjct: 367 KPNVAQEVFSHMVSRGVPPNIRTYNV 392
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 127/287 (44%), Gaps = 4/287 (1%)
Query: 264 NLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKLLEEMIQ 322
NLL++ C+ A KM K+ + T+ L+ G+C M ++ +M++
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170
Query: 323 LGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDR 382
+G +PD Y T +D+ CK G + A+ LF+ M G P Y ++ L + R
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGI---RPDVVMYTSLVNGLCNSGR 227
Query: 383 MEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNC 442
+ L+ M PDV T+ +I+ GK +A + EM P+I TY
Sbjct: 228 WRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTS 287
Query: 443 FLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRG 502
+ C +EA +++ M C P V Y LI+ F + D A + + EM ++G
Sbjct: 288 LINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKG 347
Query: 503 CNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFL 549
+T TY +I+G K A + ++++G+ + ++ L
Sbjct: 348 LTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLL 394
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 152/336 (45%), Gaps = 9/336 (2%)
Query: 201 KVKQFRIVCDMLDYMKRKNKS--TVPVEVLMTILRKYTEKYLTHVQKFAKKKRIRVKTQP 258
K+K+F +V ++ D+++ S +LM + ++ YL F K +++ +P
Sbjct: 84 KMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLA--SSFLGK-MMKLGFEP 140
Query: 259 EINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKLL 317
+I F L++ C +E A + +M ++ I + Y ++ C+ + L
Sbjct: 141 DIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLF 200
Query: 318 EEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTL 377
++M G RPD Y + ++ C +G +A L M + P T+ +I
Sbjct: 201 DQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKI---KPDVITFNALIDAF 257
Query: 378 AQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDI 437
+ + + +L MI P++ TY +I G C+ G +DEA + M KG PD+
Sbjct: 258 VKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDV 317
Query: 438 VTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQE 497
V Y + C KK ++A+K++ M + + TY LI F ++ P+ A E +
Sbjct: 318 VAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSH 377
Query: 498 MEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEV 533
M RG + TY V++ L K ++A + E++
Sbjct: 378 MVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDM 413
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 101/209 (48%), Gaps = 1/209 (0%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKL 316
P++ A+ L++ CKC V+ A ++ +M +K + N TY L+ G+ +V P ++
Sbjct: 315 PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEV 374
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
M+ G P+ TYN L C G + +A+ +FE M+ + +P TY +++
Sbjct: 375 FSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHG 434
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
L N ++E+ + M + TY II+G+C GK+ A + +KG P+
Sbjct: 435 LCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPN 494
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIE 465
+VTY + L EA L+ +M E
Sbjct: 495 VVTYTTMISGLFREGLKHEAHVLFRKMKE 523
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 118/255 (46%), Gaps = 7/255 (2%)
Query: 252 IRVKTQPEINAFNLLLDALC-KCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSP 310
IR+ P I + L++ C + C+ E + Y K + Y L+ G+C+ +
Sbjct: 274 IRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKV 333
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
MK+ EM Q G + TY T + + + G A ++F M ++G P +TY
Sbjct: 334 DDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGV---PPNIRTY 390
Query: 371 AIMIVTLAQNDRMEEC---FKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEE 427
+++ L N ++++ F+ M G P++ TY ++ G+C GK+++A E+
Sbjct: 391 NVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFED 450
Query: 428 MGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDD 487
M + I+TY ++ +C K + A+ L+ + P+V TY +IS F
Sbjct: 451 MRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGL 510
Query: 488 PDGAFETWQEMEKRG 502
A +++M++ G
Sbjct: 511 KHEAHVLFRKMKEDG 525
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 74/189 (39%)
Query: 382 RMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYN 441
+ E L +M+ S LP + + ++ + K D + + G D+ T N
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 442 CFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKR 501
+ C + + A G+M++L P + T+ LI+ F + + A +M +
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 502 GCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAI 561
G D Y +I+ L A SL +++ N GI+ + S + L + G
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 562 HKLSDHMRK 570
L M K
Sbjct: 232 DSLLRGMTK 240
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 193/406 (47%), Gaps = 26/406 (6%)
Query: 118 DSDVDKVCNTMMDNLHGFNNLEKALDQLAIPLSTPLVTGVLHRLRYDE--KIAFRFFTWA 175
++ + +V + + G ++LE+ L+Q+++ S+ LVT V+ + + + RFF+W+
Sbjct: 34 ETALHEVIRIVSSPVGGLDDLEENLNQVSVSPSSNLVTQVIESCKNETSPRRLLRFFSWS 93
Query: 176 GNQENYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKY 235
S +N ++ +L+ K ++ D+ + +K T + V T+++
Sbjct: 94 CKSLGSSLHDKEFNYVLRVLAEKKDHTAMQILLSDLRKENRAMDKQTFSI-VAETLVKVG 152
Query: 236 TEKYLTHVQKFAKKKRIRVKTQPEINAFNL--LLDALCKCCLVEYAEGLYKKMRKIINTN 293
E+ + K K + P+ + F + ++ ALC V+ A G+ + +I+ N
Sbjct: 153 KEEDAIGIFKILDKF-----SCPQ-DGFTVTAIISALCSRGHVKRALGVMHHHKDVISGN 206
Query: 294 A-ETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCK-------AGMI 345
Y L+FGW R+ +++++M G PD F +N+ L C+ +G++
Sbjct: 207 ELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLV 266
Query: 346 TEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTY 405
EA+++ MR S PT+ +Y I++ L + R+ E +++ M SGC PD +Y
Sbjct: 267 PEALNIMLEMR---SYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSY 323
Query: 406 KDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIE 465
++ + L G+ + + ++EM +G+ P+ Y + VLC ++ AL+L+ +M
Sbjct: 324 YFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKR 383
Query: 466 LRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYC 511
Q Y++LI + G FE +E+ + ++D C
Sbjct: 384 SSVGGYGQVYDLLIPKLCK----GGNFEKGRELWEEALSIDVTLSC 425
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 126/276 (45%), Gaps = 4/276 (1%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKL 316
P + ++ ++D CK V A GLYK++ + N + LV G+C+ R L
Sbjct: 267 PNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSL 326
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
M++ G P+ + YN + +CK+G + EAV L M S SP TY I+I
Sbjct: 327 FVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEME---SLNLSPDVFTYTILING 383
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
L D++ E +L M + P TY +I G C +++A EM G P+
Sbjct: 384 LCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPN 443
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQ 496
I+T++ + C+ + + A+ LY M +P V TY LI F+ + A +
Sbjct: 444 IITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYS 503
Query: 497 EMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEE 532
+M + G + + T+ +++G + + A +E
Sbjct: 504 DMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQE 539
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 126/276 (45%), Gaps = 5/276 (1%)
Query: 244 QKFAKKKRIRV-KTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILV 301
Q + K I V + P + F L+D CK + A L+ M K ++ N YN L+
Sbjct: 287 QAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLI 346
Query: 302 FGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGST 361
G C+ + + LL EM L PD FTY ++ C + EA LF+ M+ +
Sbjct: 347 HGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIF 406
Query: 362 ISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEA 421
P++ TY +I + ME+ L M +SG P++ T+ +I+G C I A
Sbjct: 407 ---PSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAA 463
Query: 422 YKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISM 481
EM KG PD+VTY + +EAL+LY M+E P+ T+ L+
Sbjct: 464 MGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDG 523
Query: 482 FFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGL 517
F++ A + +QE ++ + + +IEGL
Sbjct: 524 FWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGL 559
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 139/299 (46%), Gaps = 9/299 (3%)
Query: 246 FAKKKRI-----RVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRK-IINTNAETYNI 299
++KK+++ + +P + + + + LC+ +E AE +++ M+K + N TY+
Sbjct: 215 YSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSA 274
Query: 300 LVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKG 359
++ G+C+ + + L +E++ P+ + T +D +CKA + A LF M G
Sbjct: 275 MIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFG 334
Query: 360 STISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKID 419
P Y +I ++ M E L+ M S PDV TY +I G+C+ ++
Sbjct: 335 V---DPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVA 391
Query: 420 EAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLI 479
EA + ++M N+ P TYN + C E+AL L M P++ T++ LI
Sbjct: 392 EANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLI 451
Query: 480 SMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGI 538
+ + D A + EM +G D TY +I+ F +EA L +++ GI
Sbjct: 452 DGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGI 510
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 107/246 (43%), Gaps = 3/246 (1%)
Query: 315 KLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMI 374
KLL+EM LG +P+ + Y + C+ + EA +FE M+ G P TY+ MI
Sbjct: 220 KLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVL---PNLYTYSAMI 276
Query: 375 VTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYP 434
+ + + + L ++ + LP+V + +++G C ++ A M G
Sbjct: 277 DGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVD 336
Query: 435 PDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFET 494
P++ YNC + C + EA+ L M L P V TY +LI+ D A
Sbjct: 337 PNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRL 396
Query: 495 WQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSD 554
+Q+M+ + TY +I G E+A L E+ G++ F + + +
Sbjct: 397 FQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCN 456
Query: 555 LGDLHA 560
+ D+ A
Sbjct: 457 VRDIKA 462
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 103/219 (47%), Gaps = 4/219 (1%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMKL 316
P++ + +L++ LC V A L++KM+ + I ++ TYN L+ G+C+ + + + L
Sbjct: 372 PDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDL 431
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
EM G P+ T++T +D YC I A+ L+ M KG P TY +I
Sbjct: 432 CSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIV---PDVVTYTALIDA 488
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
+ M+E +L M+ +G P+ T+ +++G G++ A F +E + +
Sbjct: 489 HFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWN 548
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTY 475
V + C + LC N A + + M P + +Y
Sbjct: 549 HVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSY 587
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 81/175 (46%)
Query: 364 SPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYK 423
SP +K ++ L + R + + MIS G +PDV Y + + G + K
Sbjct: 161 SPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEK 220
Query: 424 FLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFF 483
L+EM + G P++ Y ++ LC + K EEA K++ M + +P++ TY+ +I +
Sbjct: 221 LLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYC 280
Query: 484 EMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGI 538
+ + A+ ++E+ + + +++G + A SL ++ G+
Sbjct: 281 KTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGV 335
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 171/395 (43%), Gaps = 53/395 (13%)
Query: 151 TPLVTGVLHRLRYDEKIAFRFFTWAGNQ--ENYSHEPCAYNDM-MDILSSTKYKVKQFRI 207
TP L R D + + F A + Y H+ ++ M + ++S+ K+K +
Sbjct: 15 TPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAE--- 71
Query: 208 VCDMLDYMKRKNKSTVPVEVLMTILRKY--TEKYLTHVQKFAKKKRIRVKTQPEINAFNL 265
D++ MK +N V ++L++I R Y + ++ F K K P A+
Sbjct: 72 --DLIVRMKIEN-CVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDF--DCDPSQKAYVT 126
Query: 266 LLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPT-RGMKLLEEMIQL 323
+L L + + A YK MR+I + + N+L+ CR G+K+ EM +
Sbjct: 127 VLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKR 186
Query: 324 GHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRM 383
G PD++T Y +I L + R+
Sbjct: 187 GCDPDSYT--------------------------------------YGTLISGLCRFGRI 208
Query: 384 EECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCF 443
+E KL M+ C P V TY +I G+C +DEA ++LEEM +KG P++ TY+
Sbjct: 209 DEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSL 268
Query: 444 LRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGC 503
+ LC + +S +A++L+ M+ C P++ TY LI+ + A E M +G
Sbjct: 269 MDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGL 328
Query: 504 NLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGI 538
D Y +I G +K EA + L+E+I GI
Sbjct: 329 KPDAGLYGKVISGFCAISKFREAANFLDEMILGGI 363
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 150/322 (46%), Gaps = 13/322 (4%)
Query: 237 EKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKC-CLVEYAEGLYKKM-RKIINTNA 294
E L KF K R + P + + N+L+ ALC+ V+ ++ +M ++ + ++
Sbjct: 134 ENQLNLAFKFYKNMR-EIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDS 192
Query: 295 ETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEF 354
TY L+ G CR KL EM++ P TY + ++ C + + EA+ E
Sbjct: 193 YTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEE 252
Query: 355 MRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCL 414
M++KG P TY+ ++ L ++ R + +L M++ GC P++ TY +I G+C
Sbjct: 253 MKSKGI---EPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCK 309
Query: 415 CGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQT 474
KI EA + L+ M +G PD Y + C K EA MI P+ T
Sbjct: 310 EQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLT 369
Query: 475 YNMLISMFFEM------DDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACS 528
+N+ + E+ + P AF + M RG +++ +T +++ L + ++A
Sbjct: 370 WNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQ 429
Query: 529 LLEEVINKGIKLPYKKFDSFLI 550
L++E++ G +P K LI
Sbjct: 430 LVDEIVTDGC-IPSKGTWKLLI 450
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 110/238 (46%), Gaps = 4/238 (1%)
Query: 303 GWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTI 362
G+ RV P +++ +M P Y T L + + A ++ MR G
Sbjct: 95 GYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGL-- 152
Query: 363 SSPTAKTYAIMIVTLAQND-RMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEA 421
PT + ++I L +ND ++ K+ M GC PD TY +I G+C G+IDEA
Sbjct: 153 -PPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEA 211
Query: 422 YKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISM 481
K EM K P +VTY + LC +K +EA++ M P+V TY+ L+
Sbjct: 212 KKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDG 271
Query: 482 FFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
+ A E ++ M RGC + TY +I GL K +EA LL+ + +G+K
Sbjct: 272 LCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLK 329
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 135/294 (45%), Gaps = 5/294 (1%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKL 316
P + +FN ++ CK V+ A+ + + K + + ++NIL+ G C V S ++L
Sbjct: 220 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 279
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
+M + G PD+ TYN + GMI+ A ++ M KG SP TY I++
Sbjct: 280 ASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGL---SPDVITYTILLCG 336
Query: 377 LAQNDRMEECFKLMGYMISSGC-LPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
Q ++ L+ M+S G L + ++ G+C G+IDEA +M G P
Sbjct: 337 QCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSP 396
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
D+V Y+ + LC K + AL LY M + R +P+ +T+ L+ + A
Sbjct: 397 DLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLL 456
Query: 496 QEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFL 549
+ G LD Y ++I+G EEA L + VI GI F+S +
Sbjct: 457 DSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLI 510
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 124/273 (45%), Gaps = 16/273 (5%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKL 316
P++ A+++++ LCK + A LY +M K I N+ T+ L+ G C+ L
Sbjct: 396 PDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSL 455
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
L+ +I G D YN +D Y K+G I EA++LF+ + G T P+ T+ +I
Sbjct: 456 LDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGIT---PSVATFNSLIYG 512
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
+ + E K++ + G P V +Y +++ CG + EM +G PP
Sbjct: 513 YCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPT 572
Query: 437 IVTYNCFLRVLCDNKKSE-----------EALKLYGRMIELRCIPSVQ-TYNMLISMFFE 484
VTY+ + LC K E E K R +E IP Q TYN +I
Sbjct: 573 NVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCR 632
Query: 485 MDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGL 517
+ GAF + M+ R + + TY ++I+ L
Sbjct: 633 VKHLSGAFVFLEIMKSRNLDASSATYNILIDSL 665
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 143/326 (43%), Gaps = 3/326 (0%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMRK-IINTNAETYNILVFGWCRVRSPTRGMKL 316
P + + N+L++ LC + A L M K + ++ TYNIL G+ + + ++
Sbjct: 255 PSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEV 314
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
+ +M+ G PD TY L C+ G I + L + M ++G ++S ++M+
Sbjct: 315 IRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP--CSVMLSG 372
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
L + R++E L M + G PD+ Y +I G+C GK D A +EM +K P+
Sbjct: 373 LCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPN 432
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQ 496
T+ L LC EA L +I + YN++I + + + A E ++
Sbjct: 433 SRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFK 492
Query: 497 EMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLG 556
+ + G T+ +I G EA +L+ + G+ + + + ++ G
Sbjct: 493 VVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCG 552
Query: 557 DLHAIHKLSDHMRKFYNPAMARRYAI 582
+ +I +L M+ P Y++
Sbjct: 553 NTKSIDELRREMKAEGIPPTNVTYSV 578
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 124/292 (42%), Gaps = 5/292 (1%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKM--RKIINTNAETYNILVFGWCRVRSPTRGMK 315
P++ + +LL C+ ++ L K M R + ++++ G C+ +
Sbjct: 325 PDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALS 384
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
L +M G PD Y+ + CK G A+ L++ M K P ++T+ +++
Sbjct: 385 LFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRIL---PNSRTHGALLL 441
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
L Q + E L+ +ISSG D+ Y +I+G G I+EA + + + G P
Sbjct: 442 GLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITP 501
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
+ T+N + C + EA K+ + PSV +Y L+ + + E
Sbjct: 502 SVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELR 561
Query: 496 QEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDS 547
+EM+ G TY V+ +GL K E +L E I + K + +S
Sbjct: 562 REMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMES 613
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 123/292 (42%), Gaps = 23/292 (7%)
Query: 259 EINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKLL 317
+I +N+++D K +E A L+K + + I + T+N L++G+C+ ++ K+L
Sbjct: 467 DIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL 526
Query: 318 EEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTL 377
+ + G P +Y T +D Y G +L M+ +G PT TY+++ L
Sbjct: 527 DVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGI---PPTNVTYSVIFKGL 583
Query: 378 AQNDRMEECFKLMGYMI------------SSGCLPDVTTYKDIIEGVCLCGKIDEAYKFL 425
+ + E C ++ I S G PD TY II+ +C + A+ FL
Sbjct: 584 CRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFL 643
Query: 426 EEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEM 485
E M ++ TYN + LC +A + E S Y LI
Sbjct: 644 EIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVK 703
Query: 486 DDPDGAFETWQEMEKRGCNLDTDTYCVMI-----EGLFNC--NKTEEACSLL 530
DP+ A + + ++ RG N+ Y +I L NC ++ C L+
Sbjct: 704 GDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLMNCFPGQSNGVCCLI 755
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 115/261 (44%), Gaps = 14/261 (5%)
Query: 280 EGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTY 339
EG ++K + +++L+F R+R + +L++M +YN+ L +
Sbjct: 114 EGTFRKWE----STGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHF 169
Query: 340 CKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCL 399
+ + D+++ ++ K TY+ ++ L + ++E+ +
Sbjct: 170 RET---DKMWDVYKEIKDK-------NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIG 219
Query: 400 PDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKL 459
P V ++ I+ G C G +D A F + G P + ++N + LC EAL+L
Sbjct: 220 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 279
Query: 460 YGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFN 519
M + P TYN+L F + GA+E ++M +G + D TY +++ G
Sbjct: 280 ASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQ 339
Query: 520 CNKTEEACSLLEEVINKGIKL 540
+ LL++++++G +L
Sbjct: 340 LGNIDMGLVLLKDMLSRGFEL 360
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 72/155 (46%)
Query: 404 TYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRM 463
TY +++G+C K+++A FL K P +V++N + C + A + +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 464 IELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKT 523
++ +PSV ++N+LI+ + A E +M K G D+ TY ++ +G
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 524 EEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDL 558
A ++ ++++KG+ + L LG++
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNI 343
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 86/205 (41%), Gaps = 18/205 (8%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMRK--IINTNAETYNILVFGWCRV-------- 307
P + ++ L+DA C + + L ++M+ I TN TY+++ G CR
Sbjct: 536 PSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNV-TYSVIFKGLCRGWKHENCNH 594
Query: 308 ----RSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTIS 363
R + + L +M G PD TYNT + C+ ++ A E M+++ S
Sbjct: 595 VLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDAS 654
Query: 364 SPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYK 423
S T Y I+I +L + + + + Y +I+ C+ G + A K
Sbjct: 655 SAT---YNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVK 711
Query: 424 FLEEMGNKGYPPDIVTYNCFLRVLC 448
++ ++G+ I Y+ + LC
Sbjct: 712 LFHQLLHRGFNVSIRDYSAVINRLC 736
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 119/245 (48%), Gaps = 4/245 (1%)
Query: 294 AETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCK-AGMITEAVDLF 352
E + L+ + + P + + +M++ P N LD G + +A +LF
Sbjct: 119 GEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELF 178
Query: 353 EFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGV 412
+ R G P ++Y +++ ND + ++L G M+ +PDV +YK +I+G
Sbjct: 179 KSSRLHGVM---PNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGF 235
Query: 413 CLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSV 472
C G+++ A + L++M NKG+ PD ++Y L LC + EA KL RM C P +
Sbjct: 236 CRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDL 295
Query: 473 QTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEE 532
YN +I F D A + +M GC+ ++ +Y +I GL + +E LEE
Sbjct: 296 VHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEE 355
Query: 533 VINKG 537
+I+KG
Sbjct: 356 MISKG 360
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 175/395 (44%), Gaps = 14/395 (3%)
Query: 148 PLSTPLVTGVLHRLRYDEKIAFRFFTWAGNQENYSHEPCAYNDMMDILSSTKYKVKQFRI 207
P+ +P L + D +A F +A Q N+ H ++ ++ L +Y F +
Sbjct: 47 PIGSPTRVQKLIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRY----FNL 102
Query: 208 VCDMLDYMKRKNKSTVPV--EVLMTILRKYTEKYLTHVQKFAKKKRIRVKTQPEINAFNL 265
+ D+L + S P+ E+ +++ Y E L K + P+ N
Sbjct: 103 IDDVL---AKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNR 159
Query: 266 LLDALCKC-CLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQL 323
+LD L ++ A L+K R + N +YN+L+ +C + +L +M++
Sbjct: 160 ILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLER 219
Query: 324 GHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRM 383
PD +Y + +C+ G + A++L + M KG P +Y ++ +L + ++
Sbjct: 220 DVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFV---PDRLSYTTLLNSLCRKTQL 276
Query: 384 EECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCF 443
E +KL+ M GC PD+ Y +I G C + +A K L++M + G P+ V+Y
Sbjct: 277 REAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTL 336
Query: 444 LRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGC 503
+ LCD +E K MI P N L+ F + A + + + K G
Sbjct: 337 IGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGE 396
Query: 504 NLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGI 538
L +DT+ ++I + N +++E+ LE+ + + I
Sbjct: 397 TLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEI 431
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 135/294 (45%), Gaps = 5/294 (1%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKL 316
P + +FN ++ CK V+ A+ + + K + + ++NIL+ G C V S ++L
Sbjct: 220 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 279
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
+M + G PD+ TYN + GMI+ A ++ M KG SP TY I++
Sbjct: 280 ASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGL---SPDVITYTILLCG 336
Query: 377 LAQNDRMEECFKLMGYMISSGC-LPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
Q ++ L+ M+S G L + ++ G+C G+IDEA +M G P
Sbjct: 337 QCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSP 396
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
D+V Y+ + LC K + AL LY M + R +P+ +T+ L+ + A
Sbjct: 397 DLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLL 456
Query: 496 QEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFL 549
+ G LD Y ++I+G EEA L + VI GI F+S +
Sbjct: 457 DSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLI 510
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 124/273 (45%), Gaps = 16/273 (5%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKL 316
P++ A+++++ LCK + A LY +M K I N+ T+ L+ G C+ L
Sbjct: 396 PDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSL 455
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
L+ +I G D YN +D Y K+G I EA++LF+ + G T P+ T+ +I
Sbjct: 456 LDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGIT---PSVATFNSLIYG 512
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
+ + E K++ + G P V +Y +++ CG + EM +G PP
Sbjct: 513 YCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPT 572
Query: 437 IVTYNCFLRVLCDNKKSE-----------EALKLYGRMIELRCIPSVQ-TYNMLISMFFE 484
VTY+ + LC K E E K R +E IP Q TYN +I
Sbjct: 573 NVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCR 632
Query: 485 MDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGL 517
+ GAF + M+ R + + TY ++I+ L
Sbjct: 633 VKHLSGAFVFLEIMKSRNLDASSATYNILIDSL 665
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 143/326 (43%), Gaps = 3/326 (0%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMRK-IINTNAETYNILVFGWCRVRSPTRGMKL 316
P + + N+L++ LC + A L M K + ++ TYNIL G+ + + ++
Sbjct: 255 PSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEV 314
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
+ +M+ G PD TY L C+ G I + L + M ++G ++S ++M+
Sbjct: 315 IRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP--CSVMLSG 372
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
L + R++E L M + G PD+ Y +I G+C GK D A +EM +K P+
Sbjct: 373 LCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPN 432
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQ 496
T+ L LC EA L +I + YN++I + + + A E ++
Sbjct: 433 SRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFK 492
Query: 497 EMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLG 556
+ + G T+ +I G EA +L+ + G+ + + + ++ G
Sbjct: 493 VVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCG 552
Query: 557 DLHAIHKLSDHMRKFYNPAMARRYAI 582
+ +I +L M+ P Y++
Sbjct: 553 NTKSIDELRREMKAEGIPPTNVTYSV 578
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 124/292 (42%), Gaps = 5/292 (1%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKM--RKIINTNAETYNILVFGWCRVRSPTRGMK 315
P++ + +LL C+ ++ L K M R + ++++ G C+ +
Sbjct: 325 PDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALS 384
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
L +M G PD Y+ + CK G A+ L++ M K P ++T+ +++
Sbjct: 385 LFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRIL---PNSRTHGALLL 441
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
L Q + E L+ +ISSG D+ Y +I+G G I+EA + + + G P
Sbjct: 442 GLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITP 501
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
+ T+N + C + EA K+ + PSV +Y L+ + + E
Sbjct: 502 SVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELR 561
Query: 496 QEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDS 547
+EM+ G TY V+ +GL K E +L E I + K + +S
Sbjct: 562 REMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMES 613
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 123/292 (42%), Gaps = 23/292 (7%)
Query: 259 EINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKLL 317
+I +N+++D K +E A L+K + + I + T+N L++G+C+ ++ K+L
Sbjct: 467 DIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL 526
Query: 318 EEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTL 377
+ + G P +Y T +D Y G +L M+ +G PT TY+++ L
Sbjct: 527 DVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGI---PPTNVTYSVIFKGL 583
Query: 378 AQNDRMEECFKLMGYMI------------SSGCLPDVTTYKDIIEGVCLCGKIDEAYKFL 425
+ + E C ++ I S G PD TY II+ +C + A+ FL
Sbjct: 584 CRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFL 643
Query: 426 EEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEM 485
E M ++ TYN + LC +A + E S Y LI
Sbjct: 644 EIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVK 703
Query: 486 DDPDGAFETWQEMEKRGCNLDTDTYCVMI-----EGLFNC--NKTEEACSLL 530
DP+ A + + ++ RG N+ Y +I L NC ++ C L+
Sbjct: 704 GDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLMNCFPGQSNGVCCLI 755
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 115/261 (44%), Gaps = 14/261 (5%)
Query: 280 EGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTY 339
EG ++K + +++L+F R+R + +L++M +YN+ L +
Sbjct: 114 EGTFRKWE----STGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHF 169
Query: 340 CKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCL 399
+ + D+++ ++ K TY+ ++ L + ++E+ +
Sbjct: 170 RET---DKMWDVYKEIKDK-------NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIG 219
Query: 400 PDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKL 459
P V ++ I+ G C G +D A F + G P + ++N + LC EAL+L
Sbjct: 220 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 279
Query: 460 YGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFN 519
M + P TYN+L F + GA+E ++M +G + D TY +++ G
Sbjct: 280 ASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQ 339
Query: 520 CNKTEEACSLLEEVINKGIKL 540
+ LL++++++G +L
Sbjct: 340 LGNIDMGLVLLKDMLSRGFEL 360
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 72/155 (46%)
Query: 404 TYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRM 463
TY +++G+C K+++A FL K P +V++N + C + A + +
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTV 248
Query: 464 IELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKT 523
++ +PSV ++N+LI+ + A E +M K G D+ TY ++ +G
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 524 EEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDL 558
A ++ ++++KG+ + L LG++
Sbjct: 309 SGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNI 343
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 86/205 (41%), Gaps = 18/205 (8%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMRK--IINTNAETYNILVFGWCRV-------- 307
P + ++ L+DA C + + L ++M+ I TN TY+++ G CR
Sbjct: 536 PSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNV-TYSVIFKGLCRGWKHENCNH 594
Query: 308 ----RSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTIS 363
R + + L +M G PD TYNT + C+ ++ A E M+++ S
Sbjct: 595 VLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDAS 654
Query: 364 SPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYK 423
S T Y I+I +L + + + + Y +I+ C+ G + A K
Sbjct: 655 SAT---YNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVK 711
Query: 424 FLEEMGNKGYPPDIVTYNCFLRVLC 448
++ ++G+ I Y+ + LC
Sbjct: 712 LFHQLLHRGFNVSIRDYSAVINRLC 736
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 132/275 (48%), Gaps = 6/275 (2%)
Query: 253 RVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPT 311
++ +P++ +N+LL+ +++ AEG+ +M R I +A +YN L+ CRV P
Sbjct: 248 KIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPD 307
Query: 312 RGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYA 371
+ + + ++ D +Y+T ++T+C+A +A LFE MR KG ++ TY
Sbjct: 308 KCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMN---VVTYT 364
Query: 372 IMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNK 431
+I + KL+ M G PD Y I++ +C G +D+AY +M
Sbjct: 365 SLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEH 424
Query: 432 GYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGA 491
PD ++YN + LC + + EA+KL+ M C P T+ +I A
Sbjct: 425 EITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAA 484
Query: 492 FETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEA 526
++ W +M +G LD D +I+ +C+ + +A
Sbjct: 485 YKVWDQMMDKGFTLDRDVSDTLIKA--SCSMSADA 517
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 145/332 (43%), Gaps = 9/332 (2%)
Query: 219 NKSTVPVEVLMTILRKYTEKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEY 278
NK+ + V + RK Y V + K R+++ T +N L+ CK +E
Sbjct: 184 NKACAALVVGLCHARKVDLAY-EMVAEEIKSARVKLSTV----VYNALISGFCKAGRIEK 238
Query: 279 AEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALD 337
AE L M KI + TYN+L+ + R ++ EM++ G + D ++YN L
Sbjct: 239 AEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLK 298
Query: 338 TYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSG 397
+C+ ++ + FM + +Y+ +I T + + ++L M G
Sbjct: 299 RHCR---VSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKG 355
Query: 398 CLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEAL 457
+ +V TY +I+ G A K L++M G PD + Y L LC + ++A
Sbjct: 356 MVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAY 415
Query: 458 KLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGL 517
++ MIE P +YN LIS A + +++M+ + C D T+ +I GL
Sbjct: 416 GVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGL 475
Query: 518 FNCNKTEEACSLLEEVINKGIKLPYKKFDSFL 549
K A + +++++KG L D+ +
Sbjct: 476 IRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLI 507
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 144/345 (41%), Gaps = 44/345 (12%)
Query: 263 FNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKLLEEMI 321
+N + L + E AE +Y M+ + + TY+ + G C+V+ LL +M
Sbjct: 47 YNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDME 106
Query: 322 QLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQND 381
LG PD + +N LD C+ + AV F M +G P +Y I+I L +
Sbjct: 107 TLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRG---REPDVVSYTILINGLFRAG 163
Query: 382 RMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFL-EEMGNKGYPPDIVTY 440
++ + ++ MI SG PD ++ G+C K+D AY+ + EE+ + V Y
Sbjct: 164 KVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVY 223
Query: 441 NCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFE---------------- 484
N + C + E+A L M ++ C P + TYN+L++ +++
Sbjct: 224 NALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVR 283
Query: 485 -------------------MDDPDGAFE-TWQEMEKRG-CNLDTDTYCVMIEGLFNCNKT 523
+ PD + +EME RG C D +Y +IE + T
Sbjct: 284 SGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC--DVVSYSTLIETFCRASNT 341
Query: 524 EEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHM 568
+A L EE+ KG+ + + S + G+ KL D M
Sbjct: 342 RKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQM 386
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 146/350 (41%), Gaps = 42/350 (12%)
Query: 258 PEINAFNLLLDALCKCCLVEYA-EGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKL 316
P+I AFN+ LD LC+ V +A + + +++ + +Y IL+ G R T +++
Sbjct: 112 PDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEI 171
Query: 317 LEEMIQLGHRPDN------------------------------------FTYNTALDTYC 340
MI+ G PDN YN + +C
Sbjct: 172 WNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFC 231
Query: 341 KAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLP 400
KAG I +A L +M G P TY +++ N+ ++ +M M+ SG
Sbjct: 232 KAGRIEKAEALKSYMSKIGC---EPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQL 288
Query: 401 DVTTYKDIIEGVCLCGKIDEAYKFL-EEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKL 459
D +Y +++ C D+ Y F+ +EM +G+ D+V+Y+ + C + +A +L
Sbjct: 289 DAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC-DVVSYSTLIETFCRASNTRKAYRL 347
Query: 460 YGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFN 519
+ M + + +V TY LI F + A + +M + G + D Y +++ L
Sbjct: 348 FEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCK 407
Query: 520 CNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMR 569
++A + ++I I ++S + L G + KL + M+
Sbjct: 408 SGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMK 457
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 108/245 (44%), Gaps = 10/245 (4%)
Query: 330 FTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECF-- 387
Y + + K+GMI AV +F+ MR + S + ++V ++ + E +
Sbjct: 10 LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWD 69
Query: 388 -KLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRV 446
K MG+ + +P TY I G+C K D L +M G+ PDI +N +L +
Sbjct: 70 MKPMGFSL----IP--FTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDL 123
Query: 447 LCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLD 506
LC K A++ + M++ P V +Y +LI+ F A E W M + G + D
Sbjct: 124 LCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPD 183
Query: 507 TDTYCVMIEGLFNCNKTEEACSLL-EEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLS 565
++ GL + K + A ++ EE+ + +KL +++ + G + L
Sbjct: 184 NKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALK 243
Query: 566 DHMRK 570
+M K
Sbjct: 244 SYMSK 248
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 80/184 (43%), Gaps = 6/184 (3%)
Query: 187 AYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEKYLTHVQKF 246
+Y+ +++ K +R+ +M R+ + V ++++ + + + V K
Sbjct: 327 SYSTLIETFCRASNTRKAYRLFEEM-----RQKGMVMNVVTYTSLIKAFLREGNSSVAKK 381
Query: 247 AKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWC 305
+ + P+ + +LD LCK V+ A G++ M I +A +YN L+ G C
Sbjct: 382 LLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLC 441
Query: 306 RVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSP 365
R T +KL E+M PD T+ + + ++ A +++ M KG T+
Sbjct: 442 RSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRD 501
Query: 366 TAKT 369
+ T
Sbjct: 502 VSDT 505
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 120/254 (47%), Gaps = 3/254 (1%)
Query: 286 MRKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMI 345
+R N TYN L+ + R M + +M + G +PD TY T +D + KAG +
Sbjct: 391 VRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFL 450
Query: 346 TEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTY 405
A+D+++ M+ G SP TY+++I L + + KL M+ GC P++ TY
Sbjct: 451 DIAMDMYQRMQAGGL---SPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTY 507
Query: 406 KDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIE 465
+++ A K +M N G+ PD VTY+ + VL EEA ++ M +
Sbjct: 508 NIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQ 567
Query: 466 LRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEE 525
IP Y +L+ ++ + + + A++ +Q M G + T ++ NK E
Sbjct: 568 KNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAE 627
Query: 526 ACSLLEEVINKGIK 539
A LL+ ++ G++
Sbjct: 628 AYELLQNMLALGLR 641
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 149/376 (39%), Gaps = 43/376 (11%)
Query: 139 EKALDQLAIPLSTPLVTGVLHRLRYDEKIAFRFFTWAGNQENYSHEPCAYNDMMDILSST 198
E+AL L + + VL ++ D A FF W Q + H+ Y M+ L
Sbjct: 319 EEALQNLGLRIDAYQANQVLKQMN-DYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLG-- 375
Query: 199 KYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEKYLTHVQKFAKKKRIRVKTQP 258
+ KQF + +LD M R V I YL
Sbjct: 376 --RAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA--------------- 418
Query: 259 EINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLE 318
+N FN + +A CK V Y +I+ +A+ G+ + M + +
Sbjct: 419 -MNVFNQMQEAGCKPDRVTYC--------TLIDIHAKA------GFLDI-----AMDMYQ 458
Query: 319 EMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLA 378
M G PD FTY+ ++ KAG + A LF M +G T P TY IM+ A
Sbjct: 459 RMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCT---PNLVTYNIMMDLHA 515
Query: 379 QNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIV 438
+ + KL M ++G PD TY ++E + CG ++EA EM K + PD
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEP 575
Query: 439 TYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEM 498
Y + + E+A + Y M+ P+V T N L+S F ++ A+E Q M
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Query: 499 EKRGCNLDTDTYCVMI 514
G TY +++
Sbjct: 636 LALGLRPSLQTYTLLL 651
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 116/247 (46%), Gaps = 3/247 (1%)
Query: 293 NAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLF 352
+ TY +V R + KLL+EM++ G +P+ TYN + +Y +A + EA+++F
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 353 EFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGV 412
M+ G P TY +I A+ ++ + M + G PD TY II +
Sbjct: 423 NQMQEAGC---KPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCL 479
Query: 413 CLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSV 472
G + A+K EM ++G P++VTYN + + + + ALKLY M P
Sbjct: 480 GKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDK 539
Query: 473 QTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEE 532
TY++++ + + A + EM+++ D Y ++++ E+A +
Sbjct: 540 VTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQA 599
Query: 533 VINKGIK 539
+++ G++
Sbjct: 600 MLHAGLR 606
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 102/231 (44%), Gaps = 4/231 (1%)
Query: 322 QLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQND 381
Q G + D TY T + +A L + M G P TY +I + + +
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGC---QPNTVTYNRLIHSYGRAN 413
Query: 382 RMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYN 441
+ E + M +GC PD TY +I+ G +D A + M G PD TY+
Sbjct: 414 YLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYS 473
Query: 442 CFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKR 501
+ L A KL+ M++ C P++ TYN+++ + + + A + +++M+
Sbjct: 474 VIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA 533
Query: 502 GCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQL 552
G D TY +++E L +C EEA ++ E+ K +P + L+ L
Sbjct: 534 GFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNW-IPDEPVYGLLVDL 583
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 120/254 (47%), Gaps = 3/254 (1%)
Query: 286 MRKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMI 345
+R N TYN L+ + R M + +M + G +PD TY T +D + KAG +
Sbjct: 391 VRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFL 450
Query: 346 TEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTY 405
A+D+++ M+ G SP TY+++I L + + KL M+ GC P++ TY
Sbjct: 451 DIAMDMYQRMQAGGL---SPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTY 507
Query: 406 KDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIE 465
+++ A K +M N G+ PD VTY+ + VL EEA ++ M +
Sbjct: 508 NIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQ 567
Query: 466 LRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEE 525
IP Y +L+ ++ + + + A++ +Q M G + T ++ NK E
Sbjct: 568 KNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAE 627
Query: 526 ACSLLEEVINKGIK 539
A LL+ ++ G++
Sbjct: 628 AYELLQNMLALGLR 641
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 149/376 (39%), Gaps = 43/376 (11%)
Query: 139 EKALDQLAIPLSTPLVTGVLHRLRYDEKIAFRFFTWAGNQENYSHEPCAYNDMMDILSST 198
E+AL L + + VL ++ D A FF W Q + H+ Y M+ L
Sbjct: 319 EEALQNLGLRIDAYQANQVLKQMN-DYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLG-- 375
Query: 199 KYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEKYLTHVQKFAKKKRIRVKTQP 258
+ KQF + +LD M R V I YL
Sbjct: 376 --RAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA--------------- 418
Query: 259 EINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLE 318
+N FN + +A CK V Y +I+ +A+ G+ + M + +
Sbjct: 419 -MNVFNQMQEAGCKPDRVTYC--------TLIDIHAKA------GFLDI-----AMDMYQ 458
Query: 319 EMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLA 378
M G PD FTY+ ++ KAG + A LF M +G T P TY IM+ A
Sbjct: 459 RMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCT---PNLVTYNIMMDLHA 515
Query: 379 QNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIV 438
+ + KL M ++G PD TY ++E + CG ++EA EM K + PD
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEP 575
Query: 439 TYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEM 498
Y + + E+A + Y M+ P+V T N L+S F ++ A+E Q M
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Query: 499 EKRGCNLDTDTYCVMI 514
G TY +++
Sbjct: 636 LALGLRPSLQTYTLLL 651
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 116/247 (46%), Gaps = 3/247 (1%)
Query: 293 NAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLF 352
+ TY +V R + KLL+EM++ G +P+ TYN + +Y +A + EA+++F
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 353 EFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGV 412
M+ G P TY +I A+ ++ + M + G PD TY II +
Sbjct: 423 NQMQEAGC---KPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCL 479
Query: 413 CLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSV 472
G + A+K EM ++G P++VTYN + + + + ALKLY M P
Sbjct: 480 GKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDK 539
Query: 473 QTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEE 532
TY++++ + + A + EM+++ D Y ++++ E+A +
Sbjct: 540 VTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQA 599
Query: 533 VINKGIK 539
+++ G++
Sbjct: 600 MLHAGLR 606
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 102/231 (44%), Gaps = 4/231 (1%)
Query: 322 QLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQND 381
Q G + D TY T + +A L + M G P TY +I + + +
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGC---QPNTVTYNRLIHSYGRAN 413
Query: 382 RMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYN 441
+ E + M +GC PD TY +I+ G +D A + M G PD TY+
Sbjct: 414 YLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYS 473
Query: 442 CFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKR 501
+ L A KL+ M++ C P++ TYN+++ + + + A + +++M+
Sbjct: 474 VIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA 533
Query: 502 GCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQL 552
G D TY +++E L +C EEA ++ E+ K +P + L+ L
Sbjct: 534 GFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNW-IPDEPVYGLLVDL 583
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 120/254 (47%), Gaps = 3/254 (1%)
Query: 286 MRKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMI 345
+R N TYN L+ + R M + +M + G +PD TY T +D + KAG +
Sbjct: 391 VRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFL 450
Query: 346 TEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTY 405
A+D+++ M+ G SP TY+++I L + + KL M+ GC P++ TY
Sbjct: 451 DIAMDMYQRMQAGGL---SPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTY 507
Query: 406 KDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIE 465
+++ A K +M N G+ PD VTY+ + VL EEA ++ M +
Sbjct: 508 NIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQ 567
Query: 466 LRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEE 525
IP Y +L+ ++ + + + A++ +Q M G + T ++ NK E
Sbjct: 568 KNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAE 627
Query: 526 ACSLLEEVINKGIK 539
A LL+ ++ G++
Sbjct: 628 AYELLQNMLALGLR 641
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 152/376 (40%), Gaps = 43/376 (11%)
Query: 139 EKALDQLAIPLSTPLVTGVLHRLRYDEKIAFRFFTWAGNQENYSHEPCAYNDMMDILSST 198
E+AL L + + VL ++ D A FF W Q + H+ Y M+ L
Sbjct: 319 EEALQNLGLRIDAYQANQVLKQMN-DYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLG-- 375
Query: 199 KYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEKYLTHVQKFAKKKRIRVKTQP 258
+ KQF + +LD M R + T Y + + + +
Sbjct: 376 --RAKQFGAINKLLDEMVRDG------------CQPNTVTYNRLIHSYGRANYL----NE 417
Query: 259 EINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLE 318
+N FN + +A CK V Y +I+ +A+ G+ + M + +
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYC--------TLIDIHAKA------GFLDI-----AMDMYQ 458
Query: 319 EMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLA 378
M G PD FTY+ ++ KAG + A LF M +G T P TY IM+ A
Sbjct: 459 RMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCT---PNLVTYNIMMDLHA 515
Query: 379 QNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIV 438
+ + KL M ++G PD TY ++E + CG ++EA EM K + PD
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEP 575
Query: 439 TYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEM 498
Y + + E+A + Y M+ P+V T N L+S F ++ A+E Q M
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Query: 499 EKRGCNLDTDTYCVMI 514
G TY +++
Sbjct: 636 LALGLRPSLQTYTLLL 651
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 116/247 (46%), Gaps = 3/247 (1%)
Query: 293 NAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLF 352
+ TY +V R + KLL+EM++ G +P+ TYN + +Y +A + EA+++F
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 353 EFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGV 412
M+ G P TY +I A+ ++ + M + G PD TY II +
Sbjct: 423 NQMQEAGC---KPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCL 479
Query: 413 CLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSV 472
G + A+K EM ++G P++VTYN + + + + ALKLY M P
Sbjct: 480 GKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDK 539
Query: 473 QTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEE 532
TY++++ + + A + EM+++ D Y ++++ E+A +
Sbjct: 540 VTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQA 599
Query: 533 VINKGIK 539
+++ G++
Sbjct: 600 MLHAGLR 606
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 102/231 (44%), Gaps = 4/231 (1%)
Query: 322 QLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQND 381
Q G + D TY T + +A L + M G P TY +I + + +
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGC---QPNTVTYNRLIHSYGRAN 413
Query: 382 RMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYN 441
+ E + M +GC PD TY +I+ G +D A + M G PD TY+
Sbjct: 414 YLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYS 473
Query: 442 CFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKR 501
+ L A KL+ M++ C P++ TYN+++ + + + A + +++M+
Sbjct: 474 VIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNA 533
Query: 502 GCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQL 552
G D TY +++E L +C EEA ++ E+ K +P + L+ L
Sbjct: 534 GFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNW-IPDEPVYGLLVDL 583
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 109/464 (23%), Positives = 199/464 (42%), Gaps = 50/464 (10%)
Query: 140 KALDQLAIPLSTPLVTGVLHRLRYDEKIAFRFFTWAGN-QENYSHEPCAYNDMMDILSST 198
++LD +IP+S P+V +L R D FF W + + Y H AY+ +
Sbjct: 46 RSLDANSIPISEPVVLQILRRNSIDPSKKLDFFRWCYSLRPGYKHSATAYSQI------- 98
Query: 199 KYKVKQFRIVC---------DMLDYMKRKN---KSTVPVEVLMTILRKYTEKYLTHVQKF 246
FR VC D+L MK T+ +L +++R + K+ + +
Sbjct: 99 ------FRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIR--SGKFESALGVL 150
Query: 247 AKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAE----------- 295
+ + P + ++ +L AL K + A + K+ + + +++
Sbjct: 151 DYMEELGDCLNPSV--YDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSY 208
Query: 296 -----TYNILVFGWCRVRSPTRGMKLLEEMIQLGH-RPDNFTYNTALDTYCKAGMITEAV 349
N L+ G R + ++ E++ + + D ++YN + + G + A+
Sbjct: 209 LPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAAL 268
Query: 350 DLFEFMRTKGSTISS---PTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYK 406
LF+ M+ + S S P TY +I L + ++ + + SG PD +TY+
Sbjct: 269 SLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYR 328
Query: 407 DIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIEL 466
+I+G C ++D+A + EM G+ PD + YNC L +K EA +L+ +M++
Sbjct: 329 ILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQE 388
Query: 467 RCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEA 526
S TYN+LI F + F + +++K+G +D T+ ++ L K E A
Sbjct: 389 GVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGA 448
Query: 527 CSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMRK 570
L+EE+ +G + S LI G KL H+R+
Sbjct: 449 VKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIRE 492
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 164/406 (40%), Gaps = 53/406 (13%)
Query: 107 FGSGMSNVVQLDSDVDKVCNTMMDNLHGFNNLEKAL------DQLAIPLSTPLVTGVL-- 158
GS + V LD + K+ ++D+L E AL ++L L+ + VL
Sbjct: 115 LGSMKEDGVNLDQTMAKI---LLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLIA 171
Query: 159 ----HRLRYDEKIAFRFFTWAGNQEN----------YSHEPCAYNDMMDILSSTKYKVKQ 204
H LR I F+ + N + Y A N+++ L + +
Sbjct: 172 LVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMR-SE 230
Query: 205 FRIVCDMLDYMKRKNKSTVP-------------VEVLMTILRKYTEKYLTHVQKFAKKKR 251
F+ V + L MKR T ++ +++ ++ E+ + F
Sbjct: 231 FKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFG---- 286
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSP 310
P+I +N L+ LC + A ++ +++ + TY IL+ G C+
Sbjct: 287 ------PDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRM 340
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
M++ EM G PD YN LD KA +TEA LFE M +G S TY
Sbjct: 341 DDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRAS---CWTY 397
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGN 430
I+I L +N R E F L + G D T+ + +C GK++ A K +EEM
Sbjct: 398 NILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMET 457
Query: 431 KGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYN 476
+G+ D+VT + L + + KL + E +P+V +N
Sbjct: 458 RGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWN 503
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 86/189 (45%), Gaps = 7/189 (3%)
Query: 326 RPDNFTY---NTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDR 382
+PD+F NT L Y G ++ A LFE G ++ T+ TY M+ + +
Sbjct: 588 KPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMG--VTDLTSYTYNSMMSSFVKKGY 645
Query: 383 MEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNC 442
+ ++ M + C D+ TY II+G+ G+ D A L+ + +G DIV YN
Sbjct: 646 FQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNT 705
Query: 443 FLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRG 502
+ L + +EA +L+ M P V +YN +I + + A++ + M G
Sbjct: 706 LINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAG 765
Query: 503 C--NLDTDT 509
C N TDT
Sbjct: 766 CLPNHVTDT 774
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 3/158 (1%)
Query: 329 NFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFK 388
++TYN+ + ++ K G A + + M + TY ++I L + R +
Sbjct: 630 SYTYNSMMSSFVKKGYFQTARGVLDQMF---ENFCAADIATYNVIIQGLGKMGRADLASA 686
Query: 389 LMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLC 448
++ + G D+ Y +I + ++DEA + + M + G PD+V+YN + V
Sbjct: 687 VLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNS 746
Query: 449 DNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMD 486
K +EA K M++ C+P+ T +L + EM+
Sbjct: 747 KAGKLKEAYKYLKAMLDAGCLPNHVTDTILDYLGKEME 784
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 70/143 (48%), Gaps = 4/143 (2%)
Query: 263 FNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMI 321
+N ++ + K + A G+ +M + TYN+++ G ++ +L+ +
Sbjct: 633 YNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLT 692
Query: 322 QLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQND 381
+ G D YNT ++ KA + EA LF+ M++ G +P +Y MI ++
Sbjct: 693 KQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNG---INPDVVSYNTMIEVNSKAG 749
Query: 382 RMEECFKLMGYMISSGCLPDVTT 404
+++E +K + M+ +GCLP+ T
Sbjct: 750 KLKEAYKYLKAMLDAGCLPNHVT 772
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 154/338 (45%), Gaps = 11/338 (3%)
Query: 151 TPLVTGVLHRLRYDEKIAFRFFTWAGNQENYSHEPCAYNDMMDILSSTKYKVKQFRIVCD 210
TP + + +L D +A +FF WAG Q+ Y H+ AYN L+ + FR
Sbjct: 124 TPSIVAEVLKLGNDAAVAAKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGH----FRAADQ 179
Query: 211 MLDYMKRKNKSTVPVEVLMTIL-RKYTEKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDA 269
+ + M + + P E IL R + + + +K + +P + +N ++DA
Sbjct: 180 LPELMDSQGRP--PSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDA 237
Query: 270 LCKCCLVEYAEGLYKKMRK-IINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPD 328
L K + A +Y+ ++ + + T+ ILV G C+ +++L+ M + +PD
Sbjct: 238 LVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPD 297
Query: 329 NFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFK 388
F Y + T G + ++ +++ MR P Y ++V L ++ R+E ++
Sbjct: 298 VFAYTAMIKTLVSEGNLDASLRVWDEMRRDE---IKPDVMAYGTLVVGLCKDGRVERGYE 354
Query: 389 LMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLC 448
L M L D Y+ +IEG GK+ A E++ + GY DI YN ++ LC
Sbjct: 355 LFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLC 414
Query: 449 DNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMD 486
+ ++A KL+ IE P +T + ++ + M+
Sbjct: 415 SVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMN 452
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 128/275 (46%), Gaps = 17/275 (6%)
Query: 312 RGMKLL---EEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAK 368
RG+++ E+M + G +P F YN +D K G A+ ++E + G S
Sbjct: 208 RGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEES---T 264
Query: 369 TYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEM 428
T+ I++ L + R+EE +++ M + C PDV Y +I+ + G +D + + +EM
Sbjct: 265 TFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEM 324
Query: 429 GNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDP 488
PD++ Y + LC + + E +L+ M + + + Y +LI F
Sbjct: 325 RRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKV 384
Query: 489 DGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSF 548
A W+++ G D Y +I+GL + N+ ++A L + I + ++ ++
Sbjct: 385 RSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPI 444
Query: 549 LI------QLSDLGD-LHAIHKL----SDHMRKFY 572
++ +LSD + L I +L SD++ +F+
Sbjct: 445 MVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFF 479
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 87/219 (39%), Gaps = 7/219 (3%)
Query: 322 QLGHRPDNFTYNTALDTYC--KAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQ 379
Q G++ D YN YC + G A L E M ++G P+ K + I+I A
Sbjct: 151 QKGYKHDFAAYNAF--AYCLNRNGHFRAADQLPELMDSQGRP---PSEKQFEILIRMHAD 205
Query: 380 NDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVT 439
N R + + M G P V Y I++ + G D A E+ G + T
Sbjct: 206 NRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTT 265
Query: 440 YNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEME 499
+ ++ LC + EE L++ RM E C P V Y +I + D + W EM
Sbjct: 266 FMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMR 325
Query: 500 KRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGI 538
+ D Y ++ GL + E L E+ K I
Sbjct: 326 RDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQI 364
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 111/271 (40%), Gaps = 34/271 (12%)
Query: 253 RVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPT 311
R + +P++ A+ L+ LCK VE L+ +M+ K I + E Y +L+ G+
Sbjct: 326 RDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVR 385
Query: 312 RGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLF-----EFMRTKGSTISSPT 366
L E+++ G+ D YN + C + +A LF E + T+S P
Sbjct: 386 SACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLS-PI 444
Query: 367 AKTYAIM------------IVTLAQ--NDRMEECFKLMG-------------YMISSGCL 399
Y +M I L +D + + FKL+ Y++ +
Sbjct: 445 MVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGH 504
Query: 400 PDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKL 459
V+ Y ++E + G I ++ EM G+ PD +Y+ + + + A
Sbjct: 505 GSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSF 564
Query: 460 YGRMIELRCIPSVQTYNMLISMFFEMDDPDG 490
+ ++IE+ C+PS+ Y L ++ + D
Sbjct: 565 HEKIIEMSCVPSIAAYLSLTKGLCQIGEIDA 595
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 75/179 (41%), Gaps = 4/179 (2%)
Query: 331 TYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLM 390
YN ++ K G I +++ LF MR G P + +Y+I I + ++
Sbjct: 509 VYNILMEALYKMGDIQKSLSLFYEMRKLGF---EPDSSSYSIAICCFVEKGDVKAACSFH 565
Query: 391 GYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEE-MGNKGYPPDIVTYNCFLRVLCD 449
+I C+P + Y + +G+C G+ID + E +GN P Y + +C
Sbjct: 566 EKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPMEFKYALTVCHVCK 625
Query: 450 NKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTD 508
+E+ +K+ M + + Y +IS + A E + E++KR + D
Sbjct: 626 GSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTELKKRKVMTEAD 684
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 70/155 (45%)
Query: 416 GKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTY 475
G A + E M ++G PP + +R+ DN++ +Y +M + P V Y
Sbjct: 172 GHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLY 231
Query: 476 NMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVIN 535
N ++ + D A +++ ++ G ++ T+ ++++GL + EE +L+ +
Sbjct: 232 NRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRE 291
Query: 536 KGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMRK 570
K + + + L G+L A ++ D MR+
Sbjct: 292 NLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRR 326
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 138/295 (46%), Gaps = 4/295 (1%)
Query: 246 FAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGW 304
F K+ + P + +N L+D+ + + A + M K ++ + TYN L+ G+
Sbjct: 351 FVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGY 410
Query: 305 CRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISS 364
C+ +LL+EM+ +G + ++ + + C M A+ M + S
Sbjct: 411 CKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNM---S 467
Query: 365 PTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKF 424
P +I L ++ + + +L ++ G + D T ++ G+C GK+DEA++
Sbjct: 468 PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI 527
Query: 425 LEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFE 484
+E+ +G D V+YN + C KK +EA M++ P TY++LI F
Sbjct: 528 QKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFN 587
Query: 485 MDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
M+ + A + W + ++ G D TY VMI+G +TEE +E+++K ++
Sbjct: 588 MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQ 642
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 144/311 (46%), Gaps = 6/311 (1%)
Query: 261 NAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKLLEE 319
+ +N L+ CK + AE L K+M I N N ++ ++ C ++ + E
Sbjct: 401 STYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGE 460
Query: 320 MIQLGHRPDNFTYNTALDTYCKAGMITEAVDL-FEFMRTKGSTISSPTAKTYAIMIVTLA 378
M+ P T + CK G ++A++L F+F+ KG + + T+ ++ L
Sbjct: 461 MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFL-NKGFVVDTRTSNA---LLHGLC 516
Query: 379 QNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIV 438
+ +++E F++ ++ GC+ D +Y +I G C K+DEA+ FL+EM +G PD
Sbjct: 517 EAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNY 576
Query: 439 TYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEM 498
TY+ + L + K EEA++ + +P V TY+++I + + + E + EM
Sbjct: 577 TYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEM 636
Query: 499 EKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDL 558
+ +T Y +I + A L E++ +KGI + S + +S + +
Sbjct: 637 MSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRV 696
Query: 559 HAIHKLSDHMR 569
L + MR
Sbjct: 697 EEAKLLFEEMR 707
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 130/289 (44%), Gaps = 13/289 (4%)
Query: 264 NLLLDALCKCCLVEYAEGLYKKMRKIIN----TNAETYNILVFGWCRVRSPTRGMKLLEE 319
N LL LC+ ++ A ++ ++I+ + +YN L+ G C + L+E
Sbjct: 509 NALLHGLCEAGKLDEA---FRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDE 565
Query: 320 MIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQ 379
M++ G +PDN+TY+ + + EA+ ++ + G P TY++MI +
Sbjct: 566 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGML---PDVYTYSVMIDGCCK 622
Query: 380 NDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVT 439
+R EE + M+S P+ Y +I C G++ A + E+M +KG P+ T
Sbjct: 623 AERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSAT 682
Query: 440 YNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEME 499
Y ++ + + EEA L+ M P+V Y LI + ++ +EM
Sbjct: 683 YTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMH 742
Query: 500 KRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGI---KLPYKKF 545
+ + + TY VMI G EA LL E+ KGI + YK+F
Sbjct: 743 SKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEF 791
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 109/229 (47%), Gaps = 4/229 (1%)
Query: 324 GHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRM 383
G P T N L + +A + + F+ + KG SP + I + ++
Sbjct: 221 GMFPSKTTCNILLTSLVRANEFQKCCEAFDVV-CKGV---SPDVYLFTTAINAFCKGGKV 276
Query: 384 EECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCF 443
EE KL M +G P+V T+ +I+G+ +CG+ DEA+ F E+M +G P ++TY+
Sbjct: 277 EEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSIL 336
Query: 444 LRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGC 503
++ L K+ +A + M + P+V YN LI F E + A E M +G
Sbjct: 337 VKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL 396
Query: 504 NLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQL 552
+L + TY +I+G + + A LL+E+++ G + F S + L
Sbjct: 397 SLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLL 445
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 125/283 (44%), Gaps = 4/283 (1%)
Query: 256 TQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGM 314
P++ F ++A CK VE A L+ KM + + N T+N ++ G
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF 315
Query: 315 KLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMI 374
E+M++ G P TY+ + +A I +A + + M KG P Y +I
Sbjct: 316 MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGF---PPNVIVYNNLI 372
Query: 375 VTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYP 434
+ + + + ++ M+S G +TY +I+G C G+ D A + L+EM + G+
Sbjct: 373 DSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFN 432
Query: 435 PDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFET 494
+ ++ + +LC + + AL+ G M+ P LIS + A E
Sbjct: 433 VNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALEL 492
Query: 495 WQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKG 537
W + +G +DT T ++ GL K +EA + +E++ +G
Sbjct: 493 WFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 535
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 101/221 (45%), Gaps = 13/221 (5%)
Query: 296 TYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFM 355
TY++++ G C+ G + +EM+ +P+ YN + YC++G ++ A++L E M
Sbjct: 612 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM 671
Query: 356 RTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLC 415
+ KG SP + TY +I ++ R+EE L M G P+V Y +I+G
Sbjct: 672 KHKGI---SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKL 728
Query: 416 GKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTY 475
G++ + L EM +K P+ +TY + + EA +L M E +P TY
Sbjct: 729 GQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Query: 476 NMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEG 516
I + + G E ++ D + Y +IEG
Sbjct: 789 KEFIYGYLKQ---GGVLEAFK-------GSDEENYAAIIEG 819
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 87/188 (46%), Gaps = 4/188 (2%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKL 316
P++ +++++D CK E + + +M K + N YN L+ +CR + ++L
Sbjct: 608 PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL 667
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
E+M G P++ TY + + + EA LFE MR +G P Y +I
Sbjct: 668 REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG---LEPNVFHYTALIDG 724
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
+ +M + L+ M S P+ TY +I G G + EA + L EM KG PD
Sbjct: 725 YGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPD 784
Query: 437 IVTYNCFL 444
+TY F+
Sbjct: 785 SITYKEFI 792
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 66/138 (47%)
Query: 431 KGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDG 490
KG PD+ + + C K EEA+KL+ +M E P+V T+N +I D
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 313
Query: 491 AFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLI 550
AF ++M +RG TY ++++GL + +A +L+E+ KG +++ +
Sbjct: 314 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 373
Query: 551 QLSDLGDLHAIHKLSDHM 568
+ G L+ ++ D M
Sbjct: 374 SFIEAGSLNKAIEIKDLM 391
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 138/295 (46%), Gaps = 4/295 (1%)
Query: 246 FAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGW 304
F K+ + P + +N L+D+ + + A + M K ++ + TYN L+ G+
Sbjct: 351 FVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGY 410
Query: 305 CRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISS 364
C+ +LL+EM+ +G + ++ + + C M A+ M + S
Sbjct: 411 CKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNM---S 467
Query: 365 PTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKF 424
P +I L ++ + + +L ++ G + D T ++ G+C GK+DEA++
Sbjct: 468 PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI 527
Query: 425 LEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFE 484
+E+ +G D V+YN + C KK +EA M++ P TY++LI F
Sbjct: 528 QKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFN 587
Query: 485 MDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
M+ + A + W + ++ G D TY VMI+G +TEE +E+++K ++
Sbjct: 588 MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQ 642
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 144/311 (46%), Gaps = 6/311 (1%)
Query: 261 NAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKLLEE 319
+ +N L+ CK + AE L K+M I N N ++ ++ C ++ + E
Sbjct: 401 STYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGE 460
Query: 320 MIQLGHRPDNFTYNTALDTYCKAGMITEAVDL-FEFMRTKGSTISSPTAKTYAIMIVTLA 378
M+ P T + CK G ++A++L F+F+ KG + + T+ ++ L
Sbjct: 461 MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFL-NKGFVVDTRTSNA---LLHGLC 516
Query: 379 QNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIV 438
+ +++E F++ ++ GC+ D +Y +I G C K+DEA+ FL+EM +G PD
Sbjct: 517 EAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNY 576
Query: 439 TYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEM 498
TY+ + L + K EEA++ + +P V TY+++I + + + E + EM
Sbjct: 577 TYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEM 636
Query: 499 EKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDL 558
+ +T Y +I + A L E++ +KGI + S + +S + +
Sbjct: 637 MSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRV 696
Query: 559 HAIHKLSDHMR 569
L + MR
Sbjct: 697 EEAKLLFEEMR 707
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 130/289 (44%), Gaps = 13/289 (4%)
Query: 264 NLLLDALCKCCLVEYAEGLYKKMRKIIN----TNAETYNILVFGWCRVRSPTRGMKLLEE 319
N LL LC+ ++ A ++ ++I+ + +YN L+ G C + L+E
Sbjct: 509 NALLHGLCEAGKLDEA---FRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDE 565
Query: 320 MIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQ 379
M++ G +PDN+TY+ + + EA+ ++ + G P TY++MI +
Sbjct: 566 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGML---PDVYTYSVMIDGCCK 622
Query: 380 NDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVT 439
+R EE + M+S P+ Y +I C G++ A + E+M +KG P+ T
Sbjct: 623 AERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSAT 682
Query: 440 YNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEME 499
Y ++ + + EEA L+ M P+V Y LI + ++ +EM
Sbjct: 683 YTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMH 742
Query: 500 KRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGI---KLPYKKF 545
+ + + TY VMI G EA LL E+ KGI + YK+F
Sbjct: 743 SKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEF 791
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 109/229 (47%), Gaps = 4/229 (1%)
Query: 324 GHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRM 383
G P T N L + +A + + F+ + KG SP + I + ++
Sbjct: 221 GMFPSKTTCNILLTSLVRANEFQKCCEAFDVV-CKGV---SPDVYLFTTAINAFCKGGKV 276
Query: 384 EECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCF 443
EE KL M +G P+V T+ +I+G+ +CG+ DEA+ F E+M +G P ++TY+
Sbjct: 277 EEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSIL 336
Query: 444 LRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGC 503
++ L K+ +A + M + P+V YN LI F E + A E M +G
Sbjct: 337 VKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL 396
Query: 504 NLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQL 552
+L + TY +I+G + + A LL+E+++ G + F S + L
Sbjct: 397 SLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLL 445
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 125/283 (44%), Gaps = 4/283 (1%)
Query: 256 TQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGM 314
P++ F ++A CK VE A L+ KM + + N T+N ++ G
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF 315
Query: 315 KLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMI 374
E+M++ G P TY+ + +A I +A + + M KG P Y +I
Sbjct: 316 MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGF---PPNVIVYNNLI 372
Query: 375 VTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYP 434
+ + + + ++ M+S G +TY +I+G C G+ D A + L+EM + G+
Sbjct: 373 DSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFN 432
Query: 435 PDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFET 494
+ ++ + +LC + + AL+ G M+ P LIS + A E
Sbjct: 433 VNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALEL 492
Query: 495 WQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKG 537
W + +G +DT T ++ GL K +EA + +E++ +G
Sbjct: 493 WFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 535
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 101/221 (45%), Gaps = 13/221 (5%)
Query: 296 TYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFM 355
TY++++ G C+ G + +EM+ +P+ YN + YC++G ++ A++L E M
Sbjct: 612 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM 671
Query: 356 RTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLC 415
+ KG SP + TY +I ++ R+EE L M G P+V Y +I+G
Sbjct: 672 KHKGI---SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKL 728
Query: 416 GKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTY 475
G++ + L EM +K P+ +TY + + EA +L M E +P TY
Sbjct: 729 GQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Query: 476 NMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEG 516
I + + G E ++ D + Y +IEG
Sbjct: 789 KEFIYGYLKQ---GGVLEAFK-------GSDEENYAAIIEG 819
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 87/188 (46%), Gaps = 4/188 (2%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKL 316
P++ +++++D CK E + + +M K + N YN L+ +CR + ++L
Sbjct: 608 PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALEL 667
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
E+M G P++ TY + + + EA LFE MR +G P Y +I
Sbjct: 668 REDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG---LEPNVFHYTALIDG 724
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
+ +M + L+ M S P+ TY +I G G + EA + L EM KG PD
Sbjct: 725 YGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPD 784
Query: 437 IVTYNCFL 444
+TY F+
Sbjct: 785 SITYKEFI 792
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 66/138 (47%)
Query: 431 KGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDG 490
KG PD+ + + C K EEA+KL+ +M E P+V T+N +I D
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE 313
Query: 491 AFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLI 550
AF ++M +RG TY ++++GL + +A +L+E+ KG +++ +
Sbjct: 314 AFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLID 373
Query: 551 QLSDLGDLHAIHKLSDHM 568
+ G L+ ++ D M
Sbjct: 374 SFIEAGSLNKAIEIKDLM 391
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 166/419 (39%), Gaps = 42/419 (10%)
Query: 120 DVDKVCNTMMDNLHGFNNLEKALDQLAIPLSTPLVTGVLHRLRYDEKIAFRFFTWAGNQE 179
DV ++C + + + ++AL++ + + LV VL + RFF+W G +
Sbjct: 614 DVQEICRVLSSS-RDWERTQEALEKSTVQFTPELVVEVLRHAKIQGNAVLRFFSWVGKRN 672
Query: 180 NYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEKY 239
Y H AYN + + K KQ R L Y R+ + + ++ +Y
Sbjct: 673 GYKHNSEAYNMSIKVAGCGK-DFKQMR----SLFYEMRRQGCLITQDTWAIMIMQYGRTG 727
Query: 240 LTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNI 299
LT++ K+ + P + F L+ LC+ KK R
Sbjct: 728 LTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCE-----------KKGRN----------- 765
Query: 300 LVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKG 359
V TR + EMI+ G PD L C+ G +A + +
Sbjct: 766 -------VEEATRTFR---EMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSL---- 811
Query: 360 STISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKID 419
I P Y+I I L + ++EE + L D TY I+ G+ G +
Sbjct: 812 GKIGFPVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQ 871
Query: 420 EAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLI 479
+A + M G P + Y + K+ E+ L+ +M C PSV TY +I
Sbjct: 872 KALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMI 931
Query: 480 SMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGI 538
+ + + A+ ++ ME+RG + D TY I L K+E+A LL E+++KGI
Sbjct: 932 CGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGI 990
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/437 (20%), Positives = 191/437 (43%), Gaps = 14/437 (3%)
Query: 137 NLEKALDQLAIPLSTPLVTGVLHRLRYDEKIAFRFFTWAGNQENYSHEPCAYNDMMDILS 196
++E L++L+ +V VL R +A RFF W ++ +SH YN M+ I
Sbjct: 141 SMEDRLEKLSFRFEPEIVENVLKRCFKVPHLAMRFFNWVKQKDGFSHRVGIYNTMLSIAG 200
Query: 197 STKYKVKQFRIVCDMLDYMKRK--NKSTVPVEVLMTILRKYTEKYLTHVQKFAKKKRIRV 254
+ + +V +++ M++ +K +L+++ K +K + F K + +
Sbjct: 201 ----EARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGK-AKKIGKGLLVFEKMR--KS 253
Query: 255 KTQPEINAFNLLLDALCKCCLVEYAEGLYKK-MRKIINTNAETYNILVFGWCRVRSPTRG 313
+ + A+N+++ +LC + A YK+ M K I TY +L+ +
Sbjct: 254 GFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVV 313
Query: 314 MKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIM 373
+ ++M+++ ++ + L ++C +G I EA++L ++ K + AK + I+
Sbjct: 314 QSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLD---AKYFEIL 370
Query: 374 IVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGY 433
+ L + +RM + +++ M L D Y II G + +A + E + G
Sbjct: 371 VKGLCRANRMVDALEIVDIMKRRK-LDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGR 429
Query: 434 PPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFE 493
PP + TY ++ L K+ E+ L+ MIE P +++ + A++
Sbjct: 430 PPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWK 489
Query: 494 TWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLS 553
+ ME++G +Y + ++ L ++ +E + ++ I + F + +
Sbjct: 490 VFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSME 549
Query: 554 DLGDLHAIHKLSDHMRK 570
G+ IH + + ++
Sbjct: 550 KNGEKEKIHLIKEIQKR 566
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 126/266 (47%), Gaps = 11/266 (4%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSP 310
+R+ E +AF LL + C ++ A L ++++ K + +A+ + ILV G CR
Sbjct: 321 VRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRM 380
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
+++++ +++ D+ Y + Y + +++A++ FE ++ G P TY
Sbjct: 381 VDALEIVD-IMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGR---PPRVSTY 436
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGN 430
++ L + + E+ L MI +G PD ++ G ++ EA+K M
Sbjct: 437 TEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEE 496
Query: 431 KGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDG 490
KG P +Y+ F++ LC + + +E +K++ +M + + ++ +IS E +
Sbjct: 497 KGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISS-MEKNGEKE 555
Query: 491 AFETWQEMEKRGCNLDTDTYCVMIEG 516
+E++KR +++YC + G
Sbjct: 556 KIHLIKEIQKR-----SNSYCDELNG 576
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 101/270 (37%), Gaps = 6/270 (2%)
Query: 282 LYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYC- 340
Y+ R+ +T+ I++ + R ++ +EM +G P + T+ + C
Sbjct: 701 FYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCE 760
Query: 341 -KAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCL 399
K + EA F M G + Y + + + C +G +
Sbjct: 761 KKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKI----GF 816
Query: 400 PDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKL 459
P Y I +C GK++EA L + D TY + L ++AL
Sbjct: 817 PVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDK 876
Query: 460 YGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFN 519
M E+ P V Y LI FF+ + ET Q+ME C TY MI G +
Sbjct: 877 VNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMS 936
Query: 520 CNKTEEACSLLEEVINKGIKLPYKKFDSFL 549
K EEA + + +G +K + F+
Sbjct: 937 LGKVEEAWNAFRNMEERGTSPDFKTYSKFI 966
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 80/186 (43%), Gaps = 8/186 (4%)
Query: 258 PEINAFNLLLDALCKCCLVEYAE---GLYKKMRKIINTNAETYNILVFGWCRVRSPTRGM 314
P A+++ + ALC+ +E A ++ R +++ TY +V G + + +
Sbjct: 817 PVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQY--TYGSIVHGLLQRGDLQKAL 874
Query: 315 KLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMI 374
+ M ++G +P Y + + + K + + ++ + M + P+ TY MI
Sbjct: 875 DKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESC---EPSVVTYTAMI 931
Query: 375 VTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYP 434
++EE + M G PD TY I +C K ++A K L EM +KG
Sbjct: 932 CGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIA 991
Query: 435 PDIVTY 440
P + +
Sbjct: 992 PSTINF 997
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 160/356 (44%), Gaps = 35/356 (9%)
Query: 249 KKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRV 307
++ +R P N+LL +L K + AE L +KM K + T NI+V G C
Sbjct: 420 QEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGS 479
Query: 308 RSPTRGMKLLEEM-----IQLGHR------------------PDNFTYNTALDTYCKAGM 344
+ +++++ M LG+ PD TY+T L+ CKAG
Sbjct: 480 GELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGR 539
Query: 345 ITEAVDLF-EFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVT 403
EA +LF E M K P + Y I I + ++ F+++ M GC +
Sbjct: 540 FAEAKNLFAEMMGEK----LQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLE 595
Query: 404 TYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRM 463
TY +I G+ + +I E + ++EM KG P+I TYN ++ LC+ +K E+A L M
Sbjct: 596 TYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEM 655
Query: 464 IELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKT 523
++ P+V ++ LI F ++ D D A E + E C Y +M L +
Sbjct: 656 MQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVF-ETAVSICGQKEGLYSLMFNELLAAGQL 714
Query: 524 EEACSLLEEVINKGIKLP---YKKFDSFLIQLSDLGDLHAI-HKLSDHMRKFYNPA 575
+A LLE V+++G +L YK L + +L I HK+ D F +PA
Sbjct: 715 LKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGF-DPA 769
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 151/338 (44%), Gaps = 27/338 (7%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMRKIIN-TNAETYNILVFGWCRVRSPTRGMK 315
+P +NL+L CK L+E A+ L++ +R+ + + ++YNI + G R
Sbjct: 288 RPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAET 347
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
+L++M G P ++YN +D CK GM+++A + M+ G P A TY ++
Sbjct: 348 VLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVC---PDAVTYGCLLH 404
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
+++ L+ M+ + CLP+ T ++ + G+I EA + L +M KGY
Sbjct: 405 GYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGL 464
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRM-----------------------IELRCIPSV 472
D VT N + LC + + ++A+++ M IE C+P +
Sbjct: 465 DTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDL 524
Query: 473 QTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEE 532
TY+ L++ + A + EM D+ Y + I K A +L++
Sbjct: 525 ITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKD 584
Query: 533 VINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMRK 570
+ KG + ++S ++ L + IH L D M++
Sbjct: 585 MEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKE 622
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 149/357 (41%), Gaps = 37/357 (10%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKL 316
P+ FNLL+ ALC V+ A L+ +M K N T+ ILV G+C+ +G++L
Sbjct: 145 PQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLEL 204
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKG---------STISS--- 364
L M G P+ YNT + ++C+ G ++ + E MR +G S IS+
Sbjct: 205 LNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCK 264
Query: 365 ------------------------PTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLP 400
P + TY +M+ + +E+ L + + L
Sbjct: 265 EGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLA 324
Query: 401 DVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLY 460
+ +Y ++G+ GK EA L++M +KG P I +YN + LC +A +
Sbjct: 325 SLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIV 384
Query: 461 GRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNC 520
G M P TY L+ + + D A QEM + C + T +++ L+
Sbjct: 385 GLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKM 444
Query: 521 NKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMRKFYNPAMA 577
+ EA LL ++ KG L + + L G+L ++ MR + A+
Sbjct: 445 GRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALG 501
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 134/286 (46%), Gaps = 12/286 (4%)
Query: 241 THVQK-FAKKKRIRVK---TQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAE 295
H+ K F + + +R + +P + +NLLL++ K VE+ LYK M I
Sbjct: 89 NHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTY 148
Query: 296 TYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFM 355
T+N+L+ C +L +EM + G +P+ FT+ + YCKAG+ + ++L M
Sbjct: 149 TFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAM 208
Query: 356 RTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLC 415
+ G P Y ++ + + R ++ K++ M G +PD+ T+ I +C
Sbjct: 209 ESFGVL---PNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKE 265
Query: 416 GKIDEAYKFLEEMGNK---GYP-PDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPS 471
GK+ +A + +M G P P+ +TYN L+ C E+A L+ + E + S
Sbjct: 266 GKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLAS 325
Query: 472 VQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGL 517
+Q+YN+ + A ++M +G +Y ++++GL
Sbjct: 326 LQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGL 371
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 143/379 (37%), Gaps = 101/379 (26%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMR-----KIINTNAETYNILVFGWCRVRSPTR 312
P+I FN + ALCK V A ++ M + N+ TYN+++ G+C+V
Sbjct: 250 PDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLED 309
Query: 313 GMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAI 372
L E + + +YN L + G EA + + M KG P+ +Y I
Sbjct: 310 AKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGI---GPSIYSYNI 366
Query: 373 MIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKID------------- 419
++ L + + + ++G M +G PD TY ++ G C GK+D
Sbjct: 367 LMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNN 426
Query: 420 ----------------------EAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEAL 457
EA + L +M KGY D VT N + LC + + ++A+
Sbjct: 427 CLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAI 486
Query: 458 KLYGRM-----------------------IELRCIPSVQTY-----------------NM 477
++ M IE C+P + TY N+
Sbjct: 487 EIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNL 546
Query: 478 LISMFFEMDDPD------------------GAFETWQEMEKRGCNLDTDTYCVMIEGLFN 519
M E PD AF ++MEK+GC+ +TY +I GL
Sbjct: 547 FAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGI 606
Query: 520 CNKTEEACSLLEEVINKGI 538
N+ E L++E+ KGI
Sbjct: 607 KNQIFEIHGLMDEMKEKGI 625
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 96/218 (44%), Gaps = 17/218 (7%)
Query: 325 HRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRME 384
++P + YN L++ K + L++ M G +P T+ ++I L + ++
Sbjct: 108 NKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGI---APQTYTFNLLIRALCDSSCVD 164
Query: 385 ECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFL 444
+L M GC P+ T+ ++ G C G D+ + L M + G P+ V YN +
Sbjct: 165 AARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIV 224
Query: 445 RVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCN 504
C +++++ K+ +M E +P + T+N IS + A + +ME
Sbjct: 225 SSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDME----- 279
Query: 505 LD---------TDTYCVMIEGLFNCNKTEEACSLLEEV 533
LD + TY +M++G E+A +L E +
Sbjct: 280 LDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESI 317
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 94/209 (44%), Gaps = 2/209 (0%)
Query: 334 TALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYM 393
+ + + K+ I +A F+ +R++ + P+ Y +++ + + R+E L M
Sbjct: 80 SVVSIFAKSNHIDKAFPQFQLVRSRFPE-NKPSVYLYNLLLESCIKERRVEFVSWLYKDM 138
Query: 394 ISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKS 453
+ G P T+ +I +C +D A + +EM KG P+ T+ +R C +
Sbjct: 139 VLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLT 198
Query: 454 EEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVM 513
++ L+L M +P+ YN ++S F D + + ++M + G D T+
Sbjct: 199 DKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSR 258
Query: 514 IEGLFNCNKTEEACSLLEEV-INKGIKLP 541
I L K +A + ++ +++ + LP
Sbjct: 259 ISALCKEGKVLDASRIFSDMELDEYLGLP 287
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 107/270 (39%), Gaps = 37/270 (13%)
Query: 240 LTHVQKFAKKKRIRV-----KTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTN 293
L +FA+ K + K QP+ A+N+ + CK + A + K M +K + +
Sbjct: 534 LCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKS 593
Query: 294 AETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFE 353
ETYN L+ G L++EM + G P+ TYNTA+ C+ + +A +L +
Sbjct: 594 LETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLD 653
Query: 354 FMRTK-------------------------------GSTISSPTAKTYAIMIVTLAQNDR 382
M K +I Y++M L +
Sbjct: 654 EMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQ 713
Query: 383 MEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNC 442
+ + +L+ ++ G YKD++E +C +++ A L +M ++GY D
Sbjct: 714 LLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMP 773
Query: 443 FLRVLCDNKKSEEALKLYGRMIELRCIPSV 472
+ L +EA +M+E+ + V
Sbjct: 774 VIDGLGKMGNKKEANSFADKMMEMASVGEV 803
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 147/344 (42%), Gaps = 15/344 (4%)
Query: 239 YLTHVQKFAKKKRIRVKTQ-----------PEINAFNLLLDALCKCCLVEYAEGLYKKMR 287
Y T + + KK R + + ++ +N+L+ LC+ + L + MR
Sbjct: 271 YNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMR 330
Query: 288 K-IINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMIT 346
K +I+ N TYN L+ G+ +LL EM+ G P++ T+N +D + G
Sbjct: 331 KRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFK 390
Query: 347 EAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYK 406
EA+ +F M KG T P+ +Y +++ L +N + M +G TY
Sbjct: 391 EALKMFYMMEAKGLT---PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYT 447
Query: 407 DIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIEL 466
+I+G+C G +DEA L EM G PDIVTY+ + C + + A ++ R+ +
Sbjct: 448 GMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRV 507
Query: 467 RCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEA 526
P+ Y+ LI M A ++ M G D T+ V++ L K EA
Sbjct: 508 GLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEA 567
Query: 527 CSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMRK 570
+ + + GI FD + + G+ + D M K
Sbjct: 568 EEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTK 611
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 125/257 (48%), Gaps = 3/257 (1%)
Query: 282 LYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCK 341
L + +++ I + T+NIL+ C S + L+++M + G+ P TYNT L YCK
Sbjct: 221 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 280
Query: 342 AGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPD 401
G A++L + M++KG TY ++I L +++R+ + + L+ M P+
Sbjct: 281 KGRFKAAIELLDHMKSKG---VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 337
Query: 402 VTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYG 461
TY +I G GK+ A + L EM + G P+ VT+N + +EALK++
Sbjct: 338 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 397
Query: 462 RMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCN 521
M PS +Y +L+ + + D A + M++ G + TY MI+GL
Sbjct: 398 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 457
Query: 522 KTEEACSLLEEVINKGI 538
+EA LL E+ GI
Sbjct: 458 FLDEAVVLLNEMSKDGI 474
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 130/279 (46%), Gaps = 4/279 (1%)
Query: 266 LLDALCKCCLVEYAEGLYKKMRK-IINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLG 324
++D LCK ++ A L +M K I+ + TY+ L+ G+C+V +++ + ++G
Sbjct: 449 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 508
Query: 325 HRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRME 384
P+ Y+T + C+ G + EA+ ++E M +G T T+ +++ +L + ++
Sbjct: 509 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHT---RDHFTFNVLVTSLCKAGKVA 565
Query: 385 ECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFL 444
E + M M S G LP+ ++ +I G G+ +A+ +EM G+ P TY L
Sbjct: 566 EAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLL 625
Query: 445 RVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCN 504
+ LC EA K + + YN L++ + + A + EM +R
Sbjct: 626 KGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSIL 685
Query: 505 LDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYK 543
D+ TY +I GL KT A +E +G LP K
Sbjct: 686 PDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNK 724
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 133/286 (46%), Gaps = 14/286 (4%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINT---NAETYNILVFGWCRVRSPTRGM 314
P + +N+LL K V + LY+ + I+N + T + LV G C G+
Sbjct: 792 PNLTTYNILLHGYSKRKDVSTSFLLYRSI--ILNGILPDKLTCHSLVLGICESNMLEIGL 849
Query: 315 KLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMI 374
K+L+ I G D +T+N + C G I A DL + M + G ++ T M+
Sbjct: 850 KILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDA---MV 906
Query: 375 VTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEM-GNKGY 433
L +N R +E ++ M G P+ Y +I G+C G I A+ EEM +K
Sbjct: 907 SVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKIC 966
Query: 434 PPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFE 493
PP+ V + +R L K++EA L M++++ +P++ ++ L+ + + + A E
Sbjct: 967 PPN-VAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALE 1025
Query: 494 TWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACS--LLEEVINKG 537
M G LD +Y V+I GL C K + A + L EE+ G
Sbjct: 1026 LRVVMSNCGLKLDLVSYNVLITGL--CAKGDMALAFELYEEMKGDG 1069
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 141/352 (40%), Gaps = 38/352 (10%)
Query: 253 RVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPT 311
+V P + LL LCK + AE K + + + YN L+ C+ +
Sbjct: 611 KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLA 670
Query: 312 RGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYA 371
+ + L EM+Q PD++TY + + C+ G A+ + +G+ + P Y
Sbjct: 671 KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVL--PNKVMYT 728
Query: 372 IMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNK 431
+ + + + + M + G PD+ T +I+G GKI++ L EMGN+
Sbjct: 729 CFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQ 788
Query: 432 GYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMI-------ELRCIPSV------------ 472
P++ TYN L K + LY +I +L C V
Sbjct: 789 NGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIG 848
Query: 473 ----------------QTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEG 516
T+NMLIS + + AF+ + M G +LD DT M+
Sbjct: 849 LKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSV 908
Query: 517 LFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHM 568
L ++ +E+ +L E+ +GI +K+ + L +GD+ + + M
Sbjct: 909 LNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEM 960
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 109/251 (43%), Gaps = 3/251 (1%)
Query: 288 KIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITE 347
++ N+N Y+IL+ + R +++ M G P +T N L + K+G E
Sbjct: 157 RLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSG---E 213
Query: 348 AVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKD 407
V ++ F++ P T+ I+I L E+ LM M SG P + TY
Sbjct: 214 DVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNT 273
Query: 408 IIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELR 467
++ C G+ A + L+ M +KG D+ TYN + LC + + + L M +
Sbjct: 274 VLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRM 333
Query: 468 CIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEAC 527
P+ TYN LI+ F A + EM G + + T+ +I+G + +EA
Sbjct: 334 IHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEAL 393
Query: 528 SLLEEVINKGI 538
+ + KG+
Sbjct: 394 KMFYMMEAKGL 404
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 133/340 (39%), Gaps = 41/340 (12%)
Query: 239 YLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETY 297
+L +KF K V + +N LL A+CK + A L+ +M ++ I ++ TY
Sbjct: 633 HLREAEKFLKSLH-AVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTY 691
Query: 298 NILVFGWCR---------------VRS---PTR------------------GMKLLEEMI 321
L+ G CR R P + G+ E+M
Sbjct: 692 TSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMD 751
Query: 322 QLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQND 381
LGH PD T N +D Y + G I + DL M G+ P TY I++ ++
Sbjct: 752 NLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEM---GNQNGGPNLTTYNILLHGYSKRK 808
Query: 382 RMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYN 441
+ F L +I +G LPD T ++ G+C ++ K L+ +G D T+N
Sbjct: 809 DVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFN 868
Query: 442 CFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKR 501
+ C N + A L M L T + ++S+ + EM K+
Sbjct: 869 MLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQ 928
Query: 502 GCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLP 541
G + ++ Y +I GL + A + EE+I I P
Sbjct: 929 GISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPP 968
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 85/187 (45%), Gaps = 3/187 (1%)
Query: 385 ECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFL 444
E F+LMG G P V T I+ V G+ + FL+EM + PD+ T+N +
Sbjct: 184 EIFRLMGLY---GFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILI 240
Query: 445 RVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCN 504
VLC E++ L +M + P++ TYN ++ + + A E M+ +G +
Sbjct: 241 NVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVD 300
Query: 505 LDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKL 564
D TY ++I L N+ + LL ++ + I +++ + S+ G + +L
Sbjct: 301 ADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQL 360
Query: 565 SDHMRKF 571
+ M F
Sbjct: 361 LNEMLSF 367
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 102/242 (42%), Gaps = 5/242 (2%)
Query: 263 FNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKLLEEMI 321
FN+L+ C + +A L K M + I+ + +T + +V R +L EM
Sbjct: 867 FNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMS 926
Query: 322 QLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQND 381
+ G P++ Y ++ C+ G I A + E M I P A M+ LA+
Sbjct: 927 KQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAH--KICPPNVAESA-MVRALAKCG 983
Query: 382 RMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYN 441
+ +E L+ +M+ +P + ++ ++ C G + EA + M N G D+V+YN
Sbjct: 984 KADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYN 1043
Query: 442 CFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDP-DGAFETWQEMEK 500
+ LC A +LY M + + TY LI + GA +++
Sbjct: 1044 VLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLA 1103
Query: 501 RG 502
RG
Sbjct: 1104 RG 1105
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 144/313 (46%), Gaps = 19/313 (6%)
Query: 230 TILRKYTEKYLTHVQ-KFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRK 288
+++ ++ L H Q K I P++ A N+L+ + CK + +A L + +
Sbjct: 98 SLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRN--R 155
Query: 289 IINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEA 348
+I+ + TYN ++ G C + L EM+++G PD +YNT +D +CK G
Sbjct: 156 VISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVG----- 210
Query: 349 VDLFEFMRTKG--STISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYK 406
F+R K IS T+ I++ + +EE ++ M+ SG PDV T+
Sbjct: 211 ----NFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYR---DMVMSGFDPDVVTFS 263
Query: 407 DIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIEL 466
II +C GK+ E L EM P+ VTY + L AL LY +M+ +
Sbjct: 264 SIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMV-V 322
Query: 467 RCIP-SVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEE 525
R IP + Y +L+ F+ D A +T++ + + + TY +++GL
Sbjct: 323 RGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSS 382
Query: 526 ACSLLEEVINKGI 538
A ++ +++ K +
Sbjct: 383 AEFIITQMLEKSV 395
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 121/262 (46%), Gaps = 4/262 (1%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMK 315
+P + + N+++ LC+ +E A + +M + I+ N TY I + + + K
Sbjct: 605 KPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFK 664
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
E ++ G + YNT + T CK GM +A + M +G P T+ ++
Sbjct: 665 THETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFI---PDTVTFNSLMH 721
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
+ + M+ +G P+V TY II G+ G I E K+L EM ++G P
Sbjct: 722 GYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRP 781
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
D TYN + + ++ +Y MI +P TYN+LIS F + A E
Sbjct: 782 DDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELL 841
Query: 496 QEMEKRGCNLDTDTYCVMIEGL 517
+EM KRG + +T TYC MI GL
Sbjct: 842 KEMGKRGVSPNTSTYCTMISGL 863
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/335 (20%), Positives = 141/335 (42%), Gaps = 32/335 (9%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI---------------------- 289
+++ P+ ++N L+D CK A+ L ++ ++
Sbjct: 188 VKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAY 247
Query: 290 -------INTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKA 342
+ + T++ ++ C+ G LL EM ++ P++ TY T +D+ KA
Sbjct: 248 RDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKA 307
Query: 343 GMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDV 402
+ A+ L+ M +G + Y +++ L + + E K ++ +P+V
Sbjct: 308 NIYRHALALYSQMVVRGIPVD---LVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNV 364
Query: 403 TTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGR 462
TY +++G+C G + A + +M K P++VTY+ + EEA+ L +
Sbjct: 365 VTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRK 424
Query: 463 MIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNK 522
M + +P+ TY +I F+ + A E +EM G + ++ L +
Sbjct: 425 MEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGR 484
Query: 523 TEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGD 557
+E L++++++KG+ L + S + GD
Sbjct: 485 IKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGD 519
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 136/313 (43%), Gaps = 5/313 (1%)
Query: 259 EINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMKLL 317
++ ++N+L+ + K V A+ YK MR K I + T+NI++ + +KL
Sbjct: 538 DVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLW 596
Query: 318 EEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTL 377
++M G +P + N + C+ G + EA+ + M P TY I + T
Sbjct: 597 DKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEI---HPNLTTYRIFLDTS 653
Query: 378 AQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDI 437
+++ R + FK ++S G Y +I +C G +A + +M +G+ PD
Sbjct: 654 SKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDT 713
Query: 438 VTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQE 497
VT+N + +AL Y M+E P+V TYN +I + + E
Sbjct: 714 VTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSE 773
Query: 498 MEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGD 557
M+ RG D TY +I G + + ++ E+I G+ ++ + + +++G
Sbjct: 774 MKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGK 833
Query: 558 LHAIHKLSDHMRK 570
+ +L M K
Sbjct: 834 MLQARELLKEMGK 846
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 138/318 (43%), Gaps = 8/318 (2%)
Query: 222 TVPVEVLMTILRKYTEKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEG 281
V VL++ + K+ + K ++K I +P+I FN+++++ K E
Sbjct: 539 VVSYNVLISGMLKFGKVGADWAYKGMREKGI----EPDIATFNIMMNSQRKQGDSEGILK 594
Query: 282 LYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYC 340
L+ KM+ I + + NI+V C + +L +M+ + P+ TY LDT
Sbjct: 595 LWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSS 654
Query: 341 KAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLP 400
K E + + G +S + Y +I TL + ++ +MG M + G +P
Sbjct: 655 KHKRADAIFKTHETLLSYGIKLSR---QVYNTLIATLCKLGMTKKAAMVMGDMEARGFIP 711
Query: 401 DVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLY 460
D T+ ++ G + + +A M G P++ TYN +R L D +E K
Sbjct: 712 DTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWL 771
Query: 461 GRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNC 520
M P TYN LIS ++ + G+ + EM G T TY V+I N
Sbjct: 772 SEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANV 831
Query: 521 NKTEEACSLLEEVINKGI 538
K +A LL+E+ +G+
Sbjct: 832 GKMLQARELLKEMGKRGV 849
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 93/429 (21%), Positives = 167/429 (38%), Gaps = 53/429 (12%)
Query: 207 IVCDMLDYMKRKNKSTVP-VEVLMTILRKYTEKYLTHVQKFAKKKRIRVKTQPEINAFNL 265
I+ ML+ KS +P V +++ Y +K + +K P +
Sbjct: 386 IITQMLE------KSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGT 439
Query: 266 LLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLG 324
++D L K E A L K+MR I + N + LV R+ L+++M+ G
Sbjct: 440 VIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKG 499
Query: 325 HRPDNFTYNTALDTYCKAG--------------------------MITEAVDL------- 351
D Y + +D + K G +I+ +
Sbjct: 500 VTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADW 559
Query: 352 -FEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIE 410
++ MR KG P T+ IM+ + + E KL M S G P + + ++
Sbjct: 560 AYKGMREKGI---EPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVG 616
Query: 411 GVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIP 470
+C GK++EA L +M P++ TY FL +K+++ K + ++
Sbjct: 617 MLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKL 676
Query: 471 SVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLL 530
S Q YN LI+ ++ A +ME RG DT T+ ++ G F + +A S
Sbjct: 677 SRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTY 736
Query: 531 EEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMRK--------FYNPAMARRYAI 582
++ GI +++ + LSD G + + K M+ YN ++ + I
Sbjct: 737 SVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKI 796
Query: 583 SQKRKSISL 591
+ S+++
Sbjct: 797 GNMKGSMTI 805
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 104/236 (44%), Gaps = 19/236 (8%)
Query: 262 AFNLLLDALCKCCLVEYAEGLYKKM--RKIINTNAETYNILVFGWCRVRSPTRGMKLLEE 319
+N L+ LCK + + A + M R I + T+N L+ G+ + +
Sbjct: 680 VYNTLIATLCKLGMTKKAAMVMGDMEARGFI-PDTVTFNSLMHGYFVGSHVRKALSTYSV 738
Query: 320 MIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQ 379
M++ G P+ TYNT + AG+I E M+++G P TY +I A+
Sbjct: 739 MMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGM---RPDDFTYNALISGQAK 795
Query: 380 NDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVT 439
M+ + MI+ G +P +TY +I GK+ +A + L+EMG +G P+ T
Sbjct: 796 IGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTST 855
Query: 440 YNCFLRVLCD---------NKKS---EEALKLYGRMIELRC-IPSVQTYNMLISMF 482
Y + LC NKK+ EA L M+E + IP QT + + F
Sbjct: 856 YCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMVEEKGYIPCNQTIYWISAAF 911
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 151/358 (42%), Gaps = 9/358 (2%)
Query: 221 STVPVEVLMTILRKYTEKYLTHVQKFAKKKRIRVKTQP-EINAFNLLLDALCKCCLVEYA 279
S P V T L K + A ++ V+ P ++ + +L+D L K + A
Sbjct: 289 SVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREA 348
Query: 280 EGLYKKMRKIINT-NAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDT 338
E +K + + N TY LV G C+ + ++ +M++ P+ TY++ ++
Sbjct: 349 EKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMING 408
Query: 339 YCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGC 398
Y K GM+ EAV L M + P TY +I L + + E +L M G
Sbjct: 409 YVKKGMLEEAVSLLRKMEDQNVV---PNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGV 465
Query: 399 LPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALK 458
+ ++ + G+I E +++M +KG D + Y + V E AL
Sbjct: 466 EENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALA 525
Query: 459 LYGRMIELRCIP-SVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGL 517
M E R +P V +YN+LIS + GA ++ M ++G D T+ +M+
Sbjct: 526 WAEEMQE-RGMPWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQ 583
Query: 518 FNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDL-HAIHKLSDHMRKFYNP 574
+E L +++ + GIK + + L + G + AIH L+ M +P
Sbjct: 584 RKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHP 641
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 145/340 (42%), Gaps = 47/340 (13%)
Query: 273 CCL-VEYAEGLYKKMRKIINT--------NAETYNILVFGWCRVRSPTRGMKLLEEMIQL 323
CC+ V EG+ +K + + + A+ Y L+ G+CR ++ +G +LL EM +
Sbjct: 352 CCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKR 411
Query: 324 GHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRM 383
+TY T + C +G + A ++ + M G P Y +I T QN R
Sbjct: 412 NIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGC---RPNVVIYTTLIKTFLQNSRF 468
Query: 384 EECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCF 443
+ +++ M G PD+ Y +I G+ ++DEA FL EM G P+ TY F
Sbjct: 469 GDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAF 528
Query: 444 L---------------------------RVLCDNKKSE--------EALKLYGRMIELRC 468
+ +VLC +E EA Y M++
Sbjct: 529 ISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGI 588
Query: 469 IPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACS 528
+ +TY +L++ F+ D D A E ++EM +G D +Y V+I G ++A S
Sbjct: 589 LGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASS 648
Query: 529 LLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHM 568
+ +E++ +G+ ++ L G++ +L D M
Sbjct: 649 IFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 150/331 (45%), Gaps = 15/331 (4%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKL 316
P++ ++ +L++ K ++ A ++ +M + + N YN+L+ G+CR + +L
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
L+EM G P+ TY T +D YCK+G + EA LF+ M+ KG P + Y ++
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV---PDSFVYTTLVDG 741
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGY--- 433
+ + +E + G GC + +I V GK + + L + + +
Sbjct: 742 CCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRF 800
Query: 434 -PPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAF 492
P+ VTYN + LC E A +L+ +M +P+V TY L++ + +M F
Sbjct: 801 GKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMF 860
Query: 493 ETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEV-----INKGIKLPYKKFDS 547
+ E G D Y V+I T +A L++++ ++ G KL +
Sbjct: 861 PVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRA 920
Query: 548 FLIQLSDLGDLHAIHKLSDHMRKF-YNPAMA 577
L + +G++ K+ ++M + Y P A
Sbjct: 921 LLSGFAKVGEMEVAEKVMENMVRLQYIPDSA 951
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 119/275 (43%), Gaps = 3/275 (1%)
Query: 296 TYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFM 355
TY++L+ G C+++ LL EM LG DN TY+ +D K A L M
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338
Query: 356 RTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLC 415
+ G I Y I +++ ME+ L MI+SG +P Y +IEG C
Sbjct: 339 VSHGINIKP---YMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCRE 395
Query: 416 GKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTY 475
+ + Y+ L EM + TY ++ +C + + A + MI C P+V Y
Sbjct: 396 KNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIY 455
Query: 476 NMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVIN 535
LI F + A +EM+++G D Y +I GL + +EA S L E++
Sbjct: 456 TTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVE 515
Query: 536 KGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMRK 570
G+K + +F+ + + + K MR+
Sbjct: 516 NGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE 550
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 157/359 (43%), Gaps = 19/359 (5%)
Query: 178 QENYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTE 237
+ N P Y ++ + S+ + IV +M+ R N V + T+++ + +
Sbjct: 410 KRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN-----VVIYTTLIKTFLQ 464
Query: 238 KYLTHVQKFAKKKRI--RVKTQ---PEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIIN 291
+F R+ +K Q P+I +N L+ L K ++ A +M +
Sbjct: 465 N-----SRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK 519
Query: 292 TNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDL 351
NA TY + G+ K ++EM + G P+ ++ YCK G + EA
Sbjct: 520 PNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSA 579
Query: 352 FEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEG 411
+ M +G AKTY +++ L +ND++++ ++ M G PDV +Y +I G
Sbjct: 580 YRSMVDQGIL---GDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLING 636
Query: 412 VCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPS 471
G + +A +EM +G P+++ YN L C + + E+A +L M P+
Sbjct: 637 FSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPN 696
Query: 472 VQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLL 530
TY +I + + D AF + EM+ +G D+ Y +++G N E A ++
Sbjct: 697 AVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 105/242 (43%), Gaps = 3/242 (1%)
Query: 297 YNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMR 356
YN L+ G + + L EM++ G +P+ FTY + Y +A A + MR
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR 549
Query: 357 TKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCG 416
G P +I + ++ E M+ G L D TY ++ G+
Sbjct: 550 ECGVL---PNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKND 606
Query: 417 KIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYN 476
K+D+A + EM KG PD+ +Y + ++A ++ M+E P+V YN
Sbjct: 607 KVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYN 666
Query: 477 MLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINK 536
ML+ F + + A E EM +G + + TYC +I+G EA L +E+ K
Sbjct: 667 MLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLK 726
Query: 537 GI 538
G+
Sbjct: 727 GL 728
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 123/279 (44%), Gaps = 17/279 (6%)
Query: 266 LLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLG 324
L++ CK V A Y+ M + I +A+TY +L+ G + ++ EM G
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622
Query: 325 HRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRME 384
PD F+Y ++ + K G + +A +F+ M +G T P Y +++ ++ +E
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLT---PNVIIYNMLLGGFCRSGEIE 679
Query: 385 ECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFL 444
+ +L+ M G P+ TY II+G C G + EA++ +EM KG PD Y +
Sbjct: 680 KAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739
Query: 445 RVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCN 504
C E A+ ++G + C S +N LI+ F+ G E E+ R +
Sbjct: 740 DGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKF----GKTELKTEVLNRLMD 794
Query: 505 LDTD--------TYCVMIEGLFNCNKTEEACSLLEEVIN 535
D TY +MI+ L E A L ++ N
Sbjct: 795 GSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQN 833
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 120/305 (39%), Gaps = 44/305 (14%)
Query: 287 RKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQ-------------------LGHRP 327
+K+ ++++ L C S + + ++E MI+ +G
Sbjct: 90 QKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSD 149
Query: 328 DNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECF 387
D + D Y G I EAV F F + G + P +++ L + +R++ +
Sbjct: 150 DGVLFGILFDGYIAKGYIEEAV--FVFSSSMGLEL-VPRLSRCKVLLDALLRWNRLDLFW 206
Query: 388 KLMGYMISSGCLPDVTTYKDIIEGVCLCGKI----DEAYKFLEEMGNKGYPPDIVTYNCF 443
+ M+ + DV TY +I C G + D +K +E T N
Sbjct: 207 DVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEF-------RTATLNV- 258
Query: 444 LRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGC 503
+ ALKL MI +P TY++LI ++ + A EM+ G
Sbjct: 259 ----------DGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGV 308
Query: 504 NLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHK 563
+LD TY ++I+GL + A L+ E+++ GI + +D + +S G +
Sbjct: 309 SLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKA 368
Query: 564 LSDHM 568
L D M
Sbjct: 369 LFDGM 373
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 10/201 (4%)
Query: 221 STVPVEVLMTILRKYTEKYL-THVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYA 279
ST P L+ + K+ + L T V +P +N+++D LCK +E A
Sbjct: 765 STAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAA 824
Query: 280 EGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDT 338
+ L+ +M+ + TY L+ G+ ++ + +E I G PD+ Y+ ++
Sbjct: 825 KELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINA 884
Query: 339 YCKAGMITEAVDLFEFMRTK-----GSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYM 393
+ K GM T+A+ L + M K G +S T + ++ A+ ME K+M M
Sbjct: 885 FLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRA---LLSGFAKVGEMEVAEKVMENM 941
Query: 394 ISSGCLPDVTTYKDIIEGVCL 414
+ +PD T ++I C+
Sbjct: 942 VRLQYIPDSATVIELINESCI 962
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 132/281 (46%), Gaps = 10/281 (3%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKL 316
P ++FN ++ +CK V++AE + M + + +YN L+ G CR R L
Sbjct: 54 PHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCR-NGDIRSASL 112
Query: 317 LEEMIQLGH----RPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAI 372
+ E ++ H +PD ++N+ + + K M+ E +F +M SP TY+
Sbjct: 113 VLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDE---VFVYMGVM-LKCCSPNVVTYST 168
Query: 373 MIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKG 432
I T ++ ++ K M P+V T+ +I+G C G ++ A +EM
Sbjct: 169 WIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVR 228
Query: 433 YPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAF 492
++VTY + C + + A ++Y RM+E R P+ Y +I FF+ D D A
Sbjct: 229 MSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAM 288
Query: 493 ETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEV 533
+ +M +G LD Y V+I GL K +EA ++E++
Sbjct: 289 KFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDM 329
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 123/275 (44%), Gaps = 1/275 (0%)
Query: 296 TYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFM 355
++N +V C++ ++ M + G PD +YN+ +D +C+ G I A + E +
Sbjct: 58 SFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESL 117
Query: 356 RTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLC 415
R I P ++ + ++ ++E F MG M+ C P+V TY I+ C
Sbjct: 118 RASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDTFCKS 176
Query: 416 GKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTY 475
G++ A K M P++VT+ C + C E A+ LY M +R +V TY
Sbjct: 177 GELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTY 236
Query: 476 NMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVIN 535
LI F + + A E + M + ++ Y +I+G F ++ A L +++N
Sbjct: 237 TALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLN 296
Query: 536 KGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMRK 570
+G++L + + L G L ++ + M K
Sbjct: 297 QGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEK 331
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 120/270 (44%), Gaps = 3/270 (1%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKL 316
+P+I +FN L + K +++ M K + N TY+ + +C+ +K
Sbjct: 126 KPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKS 185
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
M + P+ T+ +D YCKAG + AV L++ MR +++ TY +I
Sbjct: 186 FHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLN---VVTYTALIDG 242
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
+ M+ ++ M+ P+ Y II+G G D A KFL +M N+G D
Sbjct: 243 FCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLD 302
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQ 496
I Y + LC N K +EA ++ M + +P + + +++ +F+ A +
Sbjct: 303 ITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYH 362
Query: 497 EMEKRGCNLDTDTYCVMIEGLFNCNKTEEA 526
++ +RG D MI+G+ + EA
Sbjct: 363 KLIERGFEPDVVALSTMIDGIAKNGQLHEA 392
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 132/324 (40%), Gaps = 11/324 (3%)
Query: 249 KKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRV 307
K+ RV+ + + L+D CK ++ AE +Y +M + N+ Y ++ G+ +
Sbjct: 222 KEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQR 281
Query: 308 RSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTA 367
MK L +M+ G R D Y + C G + EA ++ E M P
Sbjct: 282 GDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLV---PDM 338
Query: 368 KTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYK-FLE 426
+ M+ ++ RM+ + +I G PDV +I+G+ G++ EA F
Sbjct: 339 VIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCI 398
Query: 427 EMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMD 486
E N V Y + LC E +L+ ++ E +P Y I+ +
Sbjct: 399 EKAND------VMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQG 452
Query: 487 DPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFD 546
+ AF+ M + G LD Y +I GL + EA + +E++N GI FD
Sbjct: 453 NLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFD 512
Query: 547 SFLIQLSDLGDLHAIHKLSDHMRK 570
+ G++ A L M++
Sbjct: 513 LLIRAYEKEGNMAAASDLLLDMQR 536
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 121/257 (47%), Gaps = 3/257 (1%)
Query: 282 LYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCK 341
L + +R N TYN L+ + R M + +M + G PD TY T +D + K
Sbjct: 382 LDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAK 441
Query: 342 AGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPD 401
AG + A+D+++ M+ G SP TY+++I L + + +L M+ GC P+
Sbjct: 442 AGFLDIAMDMYQRMQEAGL---SPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPN 498
Query: 402 VTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYG 461
+ T+ +I + A K +M N G+ PD VTY+ + VL EEA ++
Sbjct: 499 LVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFA 558
Query: 462 RMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCN 521
M +P Y +L+ ++ + + D A++ +Q M + G + T ++ +
Sbjct: 559 EMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVH 618
Query: 522 KTEEACSLLEEVINKGI 538
+ EA +LL+ ++ G+
Sbjct: 619 RMSEAYNLLQSMLALGL 635
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 142/347 (40%), Gaps = 42/347 (12%)
Query: 168 AFRFFTWAGNQENYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEV 227
A FF W Q + H+ Y M+ L + KQF + +LD M R
Sbjct: 342 ALGFFYWLKRQPGFKHDGHTYTTMVGNLG----RAKQFGEINKLLDEMVRDG-------- 389
Query: 228 LMTILRKYTEKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR 287
+ T Y + + + ++ +N FN + +A C+ V Y
Sbjct: 390 ----CKPNTVTYNRLIHSYGRANYLK----EAMNVFNQMQEAGCEPDRVTYC-------- 433
Query: 288 KIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITE 347
+I+ +A+ G+ + M + + M + G PD FTY+ ++ KAG +
Sbjct: 434 TLIDIHAKA------GFLDI-----AMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPA 482
Query: 348 AVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKD 407
A LF M +G T P T+ IMI A+ E KL M ++G PD TY
Sbjct: 483 AHRLFCEMVGQGCT---PNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSI 539
Query: 408 IIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELR 467
++E + CG ++EA EM K + PD Y + + ++A + Y M++
Sbjct: 540 VMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAG 599
Query: 468 CIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMI 514
P+V T N L+S F + A+ Q M G + TY +++
Sbjct: 600 LRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 646
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 117/250 (46%), Gaps = 9/250 (3%)
Query: 293 NAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLF 352
+ TY +V R + KLL+EM++ G +P+ TYN + +Y +A + EA+++F
Sbjct: 358 DGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVF 417
Query: 353 EFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGV 412
M+ G P TY +I A+ ++ + M +G PD TY II +
Sbjct: 418 NQMQEAGC---EPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCL 474
Query: 413 CLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSV 472
G + A++ EM +G P++VT+N + + + E ALKLY M P
Sbjct: 475 GKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDK 534
Query: 473 QTYNMLISMFFE---MDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSL 529
TY++++ + +++ +G F EM+++ D Y ++++ ++A
Sbjct: 535 VTYSIVMEVLGHCGFLEEAEGVFA---EMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQW 591
Query: 530 LEEVINKGIK 539
+ ++ G++
Sbjct: 592 YQAMLQAGLR 601
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 98/215 (45%), Gaps = 3/215 (1%)
Query: 322 QLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQND 381
Q G + D TY T + +A E L + M G P TY +I + + +
Sbjct: 352 QPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGC---KPNTVTYNRLIHSYGRAN 408
Query: 382 RMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYN 441
++E + M +GC PD TY +I+ G +D A + M G PD TY+
Sbjct: 409 YLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYS 468
Query: 442 CFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKR 501
+ L A +L+ M+ C P++ T+N++I++ + + + A + +++M+
Sbjct: 469 VIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNA 528
Query: 502 GCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINK 536
G D TY +++E L +C EEA + E+ K
Sbjct: 529 GFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRK 563
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 140/305 (45%), Gaps = 6/305 (1%)
Query: 246 FAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRK-IINTNAETYNILVFGW 304
F + KRI I + ++ A C+ C +E AE L ++M + I+ Y+ ++ G+
Sbjct: 402 FDEAKRIHKTLNASI--YGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGY 459
Query: 305 CRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISS 364
V +G+ + + + + G P TY ++ Y K G I++A+++ M+ +G
Sbjct: 460 TMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGV---K 516
Query: 365 PTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKF 424
KTY++MI + F + M+ G PDV Y +II C G +D A +
Sbjct: 517 HNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQT 576
Query: 425 LEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFE 484
++EM + P T+ + + +L+++ M C+P+V T+N LI+ E
Sbjct: 577 VKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVE 636
Query: 485 MDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKK 544
+ A E EM G + + TY +++G + T +A + N+G+ +
Sbjct: 637 KRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFT 696
Query: 545 FDSFL 549
+++ L
Sbjct: 697 YEALL 701
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 120/254 (47%), Gaps = 5/254 (1%)
Query: 297 YNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMR 356
YN ++ +C + + R ++ ++EM +L HRP T+ + Y K+G + ++++F+ MR
Sbjct: 557 YNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMR 616
Query: 357 TKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCG 416
G PT T+ +I L + +ME+ +++ M +G + TY I++G G
Sbjct: 617 RCGCV---PTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVG 673
Query: 417 KIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQ-TY 475
+A+++ + N+G DI TY L+ C + + + AL + M R IP Y
Sbjct: 674 DTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEM-SARNIPRNSFVY 732
Query: 476 NMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVIN 535
N+LI + D A + Q+M+K G D TY I A +EE+
Sbjct: 733 NILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEA 792
Query: 536 KGIKLPYKKFDSFL 549
G+K K + + +
Sbjct: 793 LGVKPNIKTYTTLI 806
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 137/303 (45%), Gaps = 4/303 (1%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMRK-IINTNAETYNILVFGWCRVRSPTRGMKL 316
P + + L++ K + A + + M++ + N +TY++++ G+ +++ +
Sbjct: 482 PTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAV 541
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
E+M++ G +PD YN + +C G + A+ + M+ PT +T+ +I
Sbjct: 542 FEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQ---KLRHRPTTRTFMPIIHG 598
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
A++ M ++ M GC+P V T+ +I G+ ++++A + L+EM G +
Sbjct: 599 YAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSAN 658
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQ 496
TY ++ + +A + + R+ + TY L+ + A +
Sbjct: 659 EHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTK 718
Query: 497 EMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLG 556
EM R ++ Y ++I+G EA L++++ +G+K + SF+ S G
Sbjct: 719 EMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAG 778
Query: 557 DLH 559
D++
Sbjct: 779 DMN 781
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 130/296 (43%), Gaps = 4/296 (1%)
Query: 263 FNLLLDALCKCCLVEYAEGLYKKMRKIINT-NAETYNILVFGWCRVRSPTRGMKLLEEMI 321
+++++ K E A+ + + ++I T NA Y +++ C+ + R L+ EM
Sbjct: 382 YSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREME 441
Query: 322 QLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQND 381
+ G Y+T +D Y + + +F+ ++ G T PT TY +I +
Sbjct: 442 EEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFT---PTVVTYGCLINLYTKVG 498
Query: 382 RMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYN 441
++ + ++ M G ++ TY +I G A+ E+M +G PD++ YN
Sbjct: 499 KISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYN 558
Query: 442 CFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKR 501
+ C + A++ M +LR P+ +T+ +I + + D + E + M +
Sbjct: 559 NIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRC 618
Query: 502 GCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGD 557
GC T+ +I GL + E+A +L+E+ G+ + + + +GD
Sbjct: 619 GCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGD 674
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 96/231 (41%), Gaps = 3/231 (1%)
Query: 296 TYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFM 355
T+N L+ G R + +++L+EM G + TY + Y G +A + F +
Sbjct: 626 TFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRL 685
Query: 356 RTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLC 415
+ +G + TY ++ ++ RM+ + M + + Y +I+G
Sbjct: 686 QNEGLDVD---IFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARR 742
Query: 416 GKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTY 475
G + EA +++M +G PDI TY F+ A + M L P+++TY
Sbjct: 743 GDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTY 802
Query: 476 NMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEA 526
LI + P+ A ++EM+ G D Y ++ L + EA
Sbjct: 803 TTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEA 853
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/339 (20%), Positives = 133/339 (39%), Gaps = 61/339 (17%)
Query: 280 EGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTY 339
EG K +++I++TN + + ++ + ++ P+R + + Y
Sbjct: 277 EGSRKSLQRILDTNGDNWQAVISAFEKISKPSR-----------------TEFGLMVKFY 319
Query: 340 CKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCL 399
+ G + A + FE MR +G T PT++ Y +I A M+E + M G
Sbjct: 320 GRRGDMHRARETFERMRARGIT---PTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIE 376
Query: 400 PDVTTYKDIIEGVCLCGK-------IDEAYK----------------------------F 424
+ TY I+ G G DEA +
Sbjct: 377 MSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEAL 436
Query: 425 LEEMGNKGYPPDIVTYNCFL---RVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISM 481
+ EM +G I Y+ + ++ D KK L ++ R+ E P+V TY LI++
Sbjct: 437 VREMEEEGIDAPIAIYHTMMDGYTMVADEKK---GLVVFKRLKECGFTPTVVTYGCLINL 493
Query: 482 FFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLP 541
+ ++ A E + M++ G + TY +MI G A ++ E+++ +G+K
Sbjct: 494 YTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPD 553
Query: 542 YKKFDSFLIQLSDLGDLHAIHKLSDHMRKFYNPAMARRY 580
+++ + +G++ + M+K + R +
Sbjct: 554 VILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTF 592
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 126/269 (46%), Gaps = 6/269 (2%)
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
+L +M + G D + +++Y KAG++ E+V +F+ M+ G T K+Y +
Sbjct: 172 ILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGV---ERTIKSYNSLFK 228
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
+ + R + M+S G P TY ++ G L +++ A +F E+M +G P
Sbjct: 229 VILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISP 288
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
D T+N + C KK +EA KL+ M + PSV +Y +I + +D D +
Sbjct: 289 DDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIF 348
Query: 496 QEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKK--FDSFLIQLS 553
+EM G + TY ++ GL + K EA ++L+ ++ K I P F L+ S
Sbjct: 349 EEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIA-PKDNSIFLKLLVSQS 407
Query: 554 DLGDLHAIHKLSDHMRKFYNPAMARRYAI 582
GD+ A ++ M PA A Y +
Sbjct: 408 KAGDMAAATEVLKAMATLNVPAEAGHYGV 436
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 111/441 (25%), Positives = 194/441 (43%), Gaps = 46/441 (10%)
Query: 122 DKVCNTMMDNLHGFNNLEKALDQLAIPLSTPLVTGVLHRLRYDEKIAFRFFTWAGNQENY 181
D +C MMDN L+ ++ L LV VLH + E A +FF W
Sbjct: 89 DTICR-MMDNRAWTTRLQNSIRDLVPEWDHSLVYNVLHGAKKLEH-ALQFFRWTERSGLI 146
Query: 182 SHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVE--VLMTILRKYTEKY 239
H+ + M+ +L K+ R C +LD ++ VP + + + ++ Y +
Sbjct: 147 RHDRDTHMKMIKMLGEVS-KLNHAR--CILLDMPEK----GVPWDEDMFVVLIESYGKAG 199
Query: 240 LTH--VQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAET 296
+ V+ F K K + V + I ++N L + + A+ + KM + + T
Sbjct: 200 IVQESVKIFQKMKDLGV--ERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHT 257
Query: 297 YNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMR 356
YN++++G+ ++ E+M G PD+ T+NT ++ +C+ + EA LF M
Sbjct: 258 YNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEM- 316
Query: 357 TKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCG 416
KG+ I P+ +Y MI DR+++ ++ M SSG P+ TTY ++ G+C G
Sbjct: 317 -KGNKI-GPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAG 374
Query: 417 KIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKK------SEEALKL----------- 459
K+ EA L+ M K P + FL++L K + E LK
Sbjct: 375 KMVEAKNILKNMMAKHIAPK--DNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAG 432
Query: 460 -YGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLF 518
YG +IE +C S YN I + + + + +E ++ Y +IE L
Sbjct: 433 HYGVLIENQCKASA--YNRAIKLLDTLIEKEIILRHQDTLE-----MEPSAYNPIIEYLC 485
Query: 519 NCNKTEEACSLLEEVINKGIK 539
N +T +A L +++ +G++
Sbjct: 486 NNGQTAKAEVLFRQLMKRGVQ 506
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 134/289 (46%), Gaps = 12/289 (4%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMKL 316
P+ FN +++ C+ ++ AE L+ +M+ I + +Y ++ G+ V G+++
Sbjct: 288 PDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRI 347
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
EEM G P+ TY+T L C AG + EA ++ + M K I+ + ++V+
Sbjct: 348 FEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAK--HIAPKDNSIFLKLLVS 405
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNK----- 431
++ M +++ M + + Y +IE C + A K L+ + K
Sbjct: 406 QSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILR 465
Query: 432 ---GYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDP 488
+ YN + LC+N ++ +A L+ ++++ R + N LI + +P
Sbjct: 466 HQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMK-RGVQDQDALNNLIRGHAKEGNP 524
Query: 489 DGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKG 537
D ++E + M +RG +++ Y ++I+ + + +A + L+ ++ G
Sbjct: 525 DSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDG 573
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 3/190 (1%)
Query: 352 FEFMR-TKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIE 410
+F R T+ S + T+ MI L + ++ ++ M G D + +IE
Sbjct: 134 LQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIE 193
Query: 411 GVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIP 470
G + E+ K ++M + G I +YN +V+ + A + + +M+ P
Sbjct: 194 SYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEP 253
Query: 471 SVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLL 530
+ TYN+++ FF + A +++M+ RG + D T+ MI G K +EA L
Sbjct: 254 TRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLF 313
Query: 531 EEVINKGIKL 540
E+ KG K+
Sbjct: 314 VEM--KGNKI 321
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 121/325 (37%), Gaps = 25/325 (7%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKM--RKIINTNAETYNILVFGWCRVRSPTRGM 314
+P ++ LL LC + A+ + K M + I + + L+ +
Sbjct: 357 EPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAAT 416
Query: 315 KLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFE-------FMRTKGSTISSPTA 367
++L+ M L + Y ++ CKA A+ L + +R + + P+A
Sbjct: 417 EVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSA 476
Query: 368 KTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEE 427
Y +I L N + + L ++ G + D ++I G G D +Y+ L+
Sbjct: 477 --YNPIIEYLCNNGQTAKAEVLFRQLMKRG-VQDQDALNNLIRGHAKEGNPDSSYEILKI 533
Query: 428 MGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDD 487
M +G P + Y ++ + +A M+E +P + +I FE
Sbjct: 534 MSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFE--- 590
Query: 488 PDGAFETWQEM------EKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLP 541
DG +T + + G + D ++E L EEA ++ + G
Sbjct: 591 -DGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQNG---H 646
Query: 542 YKKFDSFLIQLSDLGDLHAIHKLSD 566
DS L LS+ G A KL D
Sbjct: 647 TADLDSLLSVLSEKGKTIAALKLLD 671
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 164/374 (43%), Gaps = 15/374 (4%)
Query: 174 WAGNQENYSH--EPCAYNDMMD-ILSSTKYKVKQFR-IVCDM--LDYMKRKNKSTVPVEV 227
W +Q++Y +P A +++D IL S+ ++ R VC DY + +
Sbjct: 71 WFSDQKDYDQKEDPEAIFNVLDYILKSSLDRLASLRESVCQTKSFDYDD-------CLSI 123
Query: 228 LMTILRKYTEKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR 287
+I+R + + +KK I P + N LL+ LCK +E A+GL ++MR
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183
Query: 288 KI-INTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMI- 345
++ + N +YN L+ G C V + + + L M + G RP+ T N + C+ G+I
Sbjct: 184 EMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIG 243
Query: 346 TEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTY 405
L E + + I++ + +N + + ++ M D Y
Sbjct: 244 NNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVY 303
Query: 406 KDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIE 465
II G+C G + AY F+ +M +G PD+ TYN + LC K +EA L+G M
Sbjct: 304 NVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQN 363
Query: 466 LRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEE 525
P +Y ++I D + A E M K + + V+I+G T
Sbjct: 364 GGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSS 423
Query: 526 ACSLLEEVINKGIK 539
A S+L +++ G+K
Sbjct: 424 ALSVLNLMLSYGVK 437
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 130/282 (46%), Gaps = 4/282 (1%)
Query: 265 LLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQL 323
+L+D+ K V A ++K+M +K + ++ YN+++ G C + + +M++
Sbjct: 270 ILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKR 329
Query: 324 GHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRM 383
G PD FTYNT + CK G EA DL M+ G +P +Y ++I L + +
Sbjct: 330 GVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGV---APDQISYKVIIQGLCIHGDV 386
Query: 384 EECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCF 443
+ + M+ S LP+V + +I+G G A L M + G P++ T N
Sbjct: 387 NRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNAL 446
Query: 444 LRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGC 503
+ + +A + M + P TYN+L+ + AF+ + EM +RGC
Sbjct: 447 IHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGC 506
Query: 504 NLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKF 545
D TY ++ GL + ++A SLL + GI + + F
Sbjct: 507 QPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPF 548
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 144/346 (41%), Gaps = 25/346 (7%)
Query: 134 GFNN---LEKALD--QLAIPLSTPLVTGVLHRLRYDEKIAFRFFTWAG-NQENYSHEPCA 187
G NN LE+ LD Q PL + T ++ + + W +Q+N +
Sbjct: 243 GNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVV 302
Query: 188 YNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEKYLTHVQKFA 247
YN ++ L S+ V + +CDM+ + N L++ L K KF
Sbjct: 303 YNVIIRGLCSSGNMVAAYGFMCDMVK--RGVNPDVFTYNTLISALCKEG--------KFD 352
Query: 248 KKKRIRVKTQ-----PEINAFNLLLDALCKCCLVEYA-EGLYKKMRKIINTNAETYNILV 301
+ + Q P+ ++ +++ LC V A E L ++ + +N+++
Sbjct: 353 EACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVI 412
Query: 302 FGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGST 361
G+ R + + +L M+ G +P+ +T N + Y K G + +A + MR ST
Sbjct: 413 DGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMR---ST 469
Query: 362 ISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEA 421
P TY +++ + F+L M+ GC PD+ TY +++ G+C G++ +A
Sbjct: 470 KIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKA 529
Query: 422 YKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELR 467
L + G D V + + ++ EA +Y + + R
Sbjct: 530 ESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKKWLATR 575
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 90/229 (39%), Gaps = 45/229 (19%)
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
L +++ L MI SG +P + T+ ++ G+C G I++A + EM G P+
Sbjct: 131 LCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPN 190
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMF-------------- 482
V+YN ++ LC ++AL L+ M + P+ T N+++
Sbjct: 191 CVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLL 250
Query: 483 -------------------------FEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGL 517
F+ + A E W+EM ++ D+ Y V+I GL
Sbjct: 251 EEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGL 310
Query: 518 FNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLG------DLHA 560
+ A + +++ +G+ +++ + L G DLH
Sbjct: 311 CSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHG 359
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 150/336 (44%), Gaps = 12/336 (3%)
Query: 179 ENYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEK 238
E + YN +M +L+ K K ++ M++ R N+ T +L+ +L E
Sbjct: 299 EGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTY--SLLLNLL--VAEG 354
Query: 239 YLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETY 297
L + + + R TQ ++ L+ L K V A L+ M + ++Y
Sbjct: 355 QLVRLDGVVEISK-RYMTQ---GIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSY 410
Query: 298 NILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRT 357
++ C +++L ++ + G D YNT K I+ DLFE M+
Sbjct: 411 MSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKK 470
Query: 358 KGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGK 417
G SP TY I+I + + ++E + + S C PD+ +Y +I + G
Sbjct: 471 DGP---SPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGD 527
Query: 418 IDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNM 477
+DEA+ +EM KG PD+VTY+ + ++ E A L+ M+ C P++ TYN+
Sbjct: 528 VDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNI 587
Query: 478 LISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVM 513
L+ + A + + +M+++G D+ TY V+
Sbjct: 588 LLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 134/301 (44%), Gaps = 17/301 (5%)
Query: 243 VQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAE-----TY 297
+Q F++ + +P ++LLL+ L AEG ++ ++ + Y
Sbjct: 325 IQVFSRM--VETGCRPNEYTYSLLLNLLV-------AEGQLVRLDGVVEISKRYMTQGIY 375
Query: 298 NILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRT 357
+ LV ++ + +L +M + + +Y + L++ C AG EA+++ +
Sbjct: 376 SYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHE 435
Query: 358 KGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGK 417
KG + T + L Q + + F+ M G PD+ TY +I G+
Sbjct: 436 KGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMK---KDGPSPDIFTYNILIASFGRVGE 492
Query: 418 IDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNM 477
+DEA EE+ PDI++YN + L N +EA + M E P V TY+
Sbjct: 493 VDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYST 552
Query: 478 LISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKG 537
L+ F + + + A+ ++EM +GC + TY ++++ L +T EA L ++ +G
Sbjct: 553 LMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQG 612
Query: 538 I 538
+
Sbjct: 613 L 613
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 139/344 (40%), Gaps = 68/344 (19%)
Query: 259 EINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAE-TYNILVFGWCRVRSPTRGMKLL 317
+I A+N+LLDAL K E A +++ M+K E TY I++ R+ + L
Sbjct: 237 DIFAYNMLLDALAKD---EKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLF 293
Query: 318 EEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLF------------------------- 352
EMI G + YNT + K M+ +A+ +F
Sbjct: 294 NEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAE 353
Query: 353 -EFMRTKGSTISSP---TAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDI 408
+ +R G S T Y+ ++ TL++ + E +L M S + +Y +
Sbjct: 354 GQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSM 413
Query: 409 IEGVCLCGKIDEAYKFL-----------------------------------EEMGNKGY 433
+E +C GK EA + L E+M G
Sbjct: 414 LESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGP 473
Query: 434 PPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFE 493
PDI TYN + + +EA+ ++ + C P + +YN LI+ + D D A
Sbjct: 474 SPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHV 533
Query: 494 TWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKG 537
++EM+++G N D TY ++E + E A SL EE++ KG
Sbjct: 534 RFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKG 577
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 140/313 (44%), Gaps = 41/313 (13%)
Query: 290 INTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAV 349
++ N T NIL+ + ++L++ + + ++FTY L Y ++ ++A
Sbjct: 167 VHGNISTVNILIGFFGNTEDLQMCLRLVK---KWDLKMNSFTYKCLLQAYLRSRDYSKAF 223
Query: 350 DLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDII 409
D++ +R G + Y +++ LA++++ + F+ M C D TY +I
Sbjct: 224 DVYCEIRRGGHKLD---IFAYNMLLDALAKDEKACQVFEDMK---KRHCRRDEYTYTIMI 277
Query: 410 EGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCI 469
+ GK DEA EM +G ++V YN ++VL K ++A++++ RM+E C
Sbjct: 278 RTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCR 337
Query: 470 PSVQTYNMLISMFF---EMDDPDGAFETWQEMEKRG----------------------CN 504
P+ TY++L+++ ++ DG E + +G C+
Sbjct: 338 PNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCD 397
Query: 505 L-------DTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGD 557
+ + D+Y M+E L KT EA +L ++ KG+ +++ L L
Sbjct: 398 MWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQ 457
Query: 558 LHAIHKLSDHMRK 570
+ IH L + M+K
Sbjct: 458 ISHIHDLFEKMKK 470
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 124/262 (47%), Gaps = 13/262 (4%)
Query: 188 YNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKY--TEKYLTHVQK 245
Y+ ++ LS + + R+ CDM + + + + M++L K + ++
Sbjct: 375 YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDS-----YMSMLESLCGAGKTIEAIEM 429
Query: 246 FAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGW 304
+K V T + +N + AL K + + L++KM+K + + TYNIL+ +
Sbjct: 430 LSKIHEKGVVTDTMM--YNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASF 487
Query: 305 CRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISS 364
RV + + EE+ + +PD +YN+ ++ K G + EA F+ M+ KG +
Sbjct: 488 GRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGL---N 544
Query: 365 PTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKF 424
P TY+ ++ + +R+E + L M+ GC P++ TY +++ + G+ EA
Sbjct: 545 PDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDL 604
Query: 425 LEEMGNKGYPPDIVTYNCFLRV 446
+M +G PD +TY R+
Sbjct: 605 YSKMKQQGLTPDSITYTVLERL 626
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 166/387 (42%), Gaps = 9/387 (2%)
Query: 185 PCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKY--TEKYLTH 242
P AY ++ L+ K Q + +L +++ K P + ++ Y + +
Sbjct: 72 PQAYRFVIKTLA----KSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGFSGRIEEA 127
Query: 243 VQKFAKKKRIR-VKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILV 301
++ F K R V + +NA L+L + L E L K R + T+ IL+
Sbjct: 128 IEVFFKIPNFRCVPSAYTLNALLLVL-VRKRQSLELVPEILVKACRMGVRLEESTFGILI 186
Query: 302 FGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGST 361
CR+ +L+ M Q D Y+ L + CK + D+ ++ T
Sbjct: 187 DALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKD-SSCFDVIGYLEDLRKT 245
Query: 362 ISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEA 421
SP + Y +++ L + R +E ++ M PD+ Y +++GV +A
Sbjct: 246 RFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKA 305
Query: 422 YKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISM 481
K +E+ G PD+ TYN ++ LC E ALK+ M +L P+V TYN+LI
Sbjct: 306 DKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKA 365
Query: 482 FFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLP 541
+ D A W+EME G N ++ T+ +MI ++ A LLEE N + +
Sbjct: 366 LVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVK 425
Query: 542 YKKFDSFLIQLSDLGDLHAIHKLSDHM 568
+ + + +L + G + +L H+
Sbjct: 426 SSRIEEVISRLCEKGLMDQAVELLAHL 452
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 122/262 (46%), Gaps = 4/262 (1%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEG-LYKKMRKIINTNAETYNILVFGWCRVRSPTRGMK 315
+P++ +N+L++ LCK E A G L + +K + N +Y L+ +C+ + K
Sbjct: 342 KPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASK 401
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
LL +M + G +PD TY + +G + +AV++ + +G SP A Y +++
Sbjct: 402 LLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGV---SPDAAIYNMLMS 458
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
L + R L M+ LPD Y +I+G G DEA K KG
Sbjct: 459 GLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKV 518
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
D+V +N ++ C + +EAL RM E +P TY+ +I + + D A + +
Sbjct: 519 DVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIF 578
Query: 496 QEMEKRGCNLDTDTYCVMIEGL 517
+ MEK C + TY +I G
Sbjct: 579 RYMEKNKCKPNVVTYTSLINGF 600
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 112/452 (24%), Positives = 194/452 (42%), Gaps = 53/452 (11%)
Query: 157 VLHRLRYDEKIAFRFFTWAGNQ--ENYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDY 214
V R++ D +I + F W ++ + + A + + +L+ +Y++ F + D+L
Sbjct: 70 VFDRIQ-DVEIGVKLFDWLSSEKKDEFFSNGFACSSFLKLLA--RYRI--FNEIEDVLGN 124
Query: 215 MKRKNKSTVPVEVLMTILRKYTEK-YLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKC 273
++ +N + E L +L Y E L+ + + P++ A N LL L K
Sbjct: 125 LRNEN-VKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKS 183
Query: 274 CLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTY 332
+ A +Y +M + + + + ILV G C G KL+E G P+ Y
Sbjct: 184 RRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFY 243
Query: 333 NTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQ------NDRM--- 383
NT + YCK G I A +F+ ++ KG PT +T+ MI + +DR+
Sbjct: 244 NTIIGGYCKLGDIENAYLVFKELKLKGFM---PTLETFGTMINGFCKEGDFVASDRLLSE 300
Query: 384 --EECFKL------------------------MGYMISSGCLPDVTTYKDIIEGVCLCGK 417
E ++ +G++I++ C PDV TY +I +C GK
Sbjct: 301 VKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGK 360
Query: 418 IDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNM 477
+ A FL+E KG P+ ++Y ++ C +K+ + A KL +M E C P + TY +
Sbjct: 361 KEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGI 420
Query: 478 LISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKG 537
LI D A ++ RG + D Y +++ GL + A L E++++
Sbjct: 421 LIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRN 480
Query: 538 IKLP----YKKFDSFLIQLSDLGDLHAIHKLS 565
I LP Y I+ D + + LS
Sbjct: 481 I-LPDAYVYATLIDGFIRSGDFDEARKVFSLS 511
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 138/312 (44%), Gaps = 31/312 (9%)
Query: 248 KKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM--RKIINTNAETYNILVFGWC 305
K K I P+ +N+L+ LCK A+ L+ +M R I+ +A Y L+ G+
Sbjct: 438 KVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNIL-PDAYVYATLIDGFI 496
Query: 306 RVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSP 365
R K+ ++ G + D +N + +C++GM+ EA+ M + P
Sbjct: 497 RSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLV---P 553
Query: 366 TAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFL 425
TY+ +I + M K+ YM + C P+V TY +I G C G A +
Sbjct: 554 DKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETF 613
Query: 426 EEMGNKGYPPDIVTYNCFLRVLCDNKKS-EEALKLYGRMIELRCIPSVQTYNMLISMFFE 484
+EM + P++VTY +R L + E+A+ + M+ +C+P+ T+N L+ F +
Sbjct: 614 KEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVK 673
Query: 485 ------MDDPDGA--------FETWQEMEKRGCNLDTDTY-----CVMIEGLFNCNKTEE 525
+ +PDG+ E + M+ G + Y C+ + G+ +
Sbjct: 674 KTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGM-----VKT 728
Query: 526 ACSLLEEVINKG 537
AC ++++ KG
Sbjct: 729 ACMFQDKMVKKG 740
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 123/305 (40%), Gaps = 39/305 (12%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMKL 316
P I +N ++ CK +E A ++K+++ K ET+ ++ G+C+ +L
Sbjct: 238 PNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRL 297
Query: 317 LEEMIQLGHR-----------------------------------PDNFTYNTALDTYCK 341
L E+ + G R PD TYN ++ CK
Sbjct: 298 LSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCK 357
Query: 342 AGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPD 401
G AV + KG P +YA +I ++ + KL+ M GC PD
Sbjct: 358 EGKKEVAVGFLDEASKKGLI---PNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPD 414
Query: 402 VTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYG 461
+ TY +I G+ + G +D+A ++ ++G PD YN + LC + A L+
Sbjct: 415 IVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFS 474
Query: 462 RMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCN 521
M++ +P Y LI F D D A + + ++G +D + MI+G
Sbjct: 475 EMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSG 534
Query: 522 KTEEA 526
+EA
Sbjct: 535 MLDEA 539
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 117/299 (39%), Gaps = 63/299 (21%)
Query: 264 NLLLDALCKCCLVE--YAEGLYKKMRKIINTNAET--------YNILVFGWCRVRSPTRG 313
N+L DA L++ G + + RK+ + + E +N ++ G+CR
Sbjct: 480 NILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEA 539
Query: 314 MKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMR---------TKGSTISS 364
+ + M + PD FTY+T +D Y K + A+ +F +M T S I+
Sbjct: 540 LACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLING 599
Query: 365 -----------------------PTAKTYAIMIVTLA-QNDRMEECFKLMGYMISSGCLP 400
P TY +I +LA ++ +E+ M+++ C+P
Sbjct: 600 FCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVP 659
Query: 401 DVTTYKDIIEGVC--LCGKI----DEA--------YKFLEEMGNKGYPPDIVTYNCFLRV 446
+ T+ +++G GK+ D + +F M + G+ YN L
Sbjct: 660 NEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVC 719
Query: 447 LCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNL 505
LC + + A +M++ P ++ ++ F + G + W+ M+ CNL
Sbjct: 720 LCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVV----GNSKQWRNMD--FCNL 772
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 112/227 (49%), Gaps = 7/227 (3%)
Query: 328 DNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECF 387
D T N L C G +T+A L E M P+ ++ LA+ D++++
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSN---LVRGLARIDQLDKAM 159
Query: 388 KLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVL 447
++ M+ SG +PD TY II +C G I A LE+M G PPD++TYN +R +
Sbjct: 160 CILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCM 219
Query: 448 CDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDT 507
D +E+A++ + ++ C P + TY +L+ + A E ++M GC D
Sbjct: 220 FDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDI 279
Query: 508 DTYCVMIEGLFNCNKT--EEACSLLEEVINKGIKLPYKKFDSFLIQL 552
TY ++ +NC + EE S+++ +++ G++L +++ L L
Sbjct: 280 VTYNSLVN--YNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSL 324
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 112/231 (48%), Gaps = 18/231 (7%)
Query: 263 FNLLLDALCKCCLVEYAEGLYKKMRKIINTNAET--------YNILVFGWCRVRSPTRGM 314
+N LL +LC EY + ++ +I+N +T YNIL+ G C+ R +R +
Sbjct: 317 YNTLLHSLCS---HEY----WDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAI 369
Query: 315 KLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMI 374
+M++ PD TYNT L K GM+ +A++L ++ +T P TY +I
Sbjct: 370 DFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLK---NTCCPPGLITYNSVI 426
Query: 375 VTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYP 434
LA+ M++ +L M+ +G PD T + +I G C ++EA + L+E N+G
Sbjct: 427 DGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNG 486
Query: 435 PDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEM 485
TY ++ LC K+ E A+++ M+ C P Y ++ EM
Sbjct: 487 IRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEM 537
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 127/293 (43%), Gaps = 32/293 (10%)
Query: 296 TYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFM 355
TY +LV CR R +++LE+M G PD TYN+ ++ C+ G + E + + +
Sbjct: 246 TYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHI 305
Query: 356 RTKGSTISS--------------------------------PTAKTYAIMIVTLAQNDRM 383
+ G +++ PT TY I+I L + +
Sbjct: 306 LSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLL 365
Query: 384 EECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCF 443
M+ CLPD+ TY ++ + G +D+A + L + N PP ++TYN
Sbjct: 366 SRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSV 425
Query: 444 LRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGC 503
+ L ++AL+LY +M++ P T LI F + + A + +E RG
Sbjct: 426 IDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGN 485
Query: 504 NLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLG 556
+ TY ++I+GL + E A ++E ++ G K + + + + ++G
Sbjct: 486 GIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMG 538
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 82/168 (48%), Gaps = 4/168 (2%)
Query: 255 KTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKII-NTNAETYNILVFGWCRVRSPTRG 313
K P+I +N +L A+ K +V+ A L ++ TYN ++ G + +
Sbjct: 379 KCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKA 438
Query: 314 MKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIM 373
++L +M+ G PD+ T + + +C+A ++ EA + + +G+ I TY ++
Sbjct: 439 LELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIR---GSTYRLV 495
Query: 374 IVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEA 421
I L + +E +++ M++ GC PD T Y I++GV G EA
Sbjct: 496 IQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEA 543
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 92/216 (42%)
Query: 353 EFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGV 412
+F + I+ +T ++ L N ++ + KL+ M +P + +++ G+
Sbjct: 90 QFGLSSDGPITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGL 149
Query: 413 CLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSV 472
++D+A L M G PD +TYN + LC AL L M P V
Sbjct: 150 ARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDV 209
Query: 473 QTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEE 532
TYN +I F+ + + A W++ + GC TY V++E + + A +LE+
Sbjct: 210 ITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLED 269
Query: 533 VINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHM 568
+ +G ++S + G+L + + H+
Sbjct: 270 MAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHI 305
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 145/317 (45%), Gaps = 7/317 (2%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMK 315
+P + +N ++ A C+ ++ A ++ +M K + N TY+IL+ G+ + +
Sbjct: 481 EPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWD 540
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFE-FMRTKGSTISSPTAKTYAIMI 374
++ +M + YNT ++ CK G ++A ++ + ++ K ++S + +
Sbjct: 541 VINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGF 600
Query: 375 VTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYP 434
V + D E ++ M +G P+V T+ +I G C ++D A + EM +
Sbjct: 601 VKVGDTDSAVETYREMS---ENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELK 657
Query: 435 PDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFET 494
D+ Y + C + A L+ + EL +P+V YN LIS F + D A +
Sbjct: 658 LDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDL 717
Query: 495 WQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQ-LS 553
+++M G + D TY MI+GL A L E+++ GI +P + L+ LS
Sbjct: 718 YKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGI-VPDEILHMVLVNGLS 776
Query: 554 DLGDLHAIHKLSDHMRK 570
G K+ + M+K
Sbjct: 777 KKGQFLKASKMLEEMKK 793
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 129/296 (43%), Gaps = 24/296 (8%)
Query: 255 KTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRG 313
K P + N +L +L + L++ A+ +Y KM I + + T +L+ R R P
Sbjct: 199 KVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEA 258
Query: 314 MKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIM 373
+K+ ++ G PD ++ A+ CK + A+DL MR K +S +TY +
Sbjct: 259 VKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPAS--QETYTSV 316
Query: 374 IVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGY 433
IV + MEE ++M M+ G V ++ G C ++ +A M +G
Sbjct: 317 IVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGL 376
Query: 434 PPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFE 493
PD V ++ + C N + E+A++ Y RM +R PS + +I + + P+ A E
Sbjct: 377 APDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALE 436
Query: 494 TWQEMEKRGCNLDTDTYCVMIEGLFNCN----------KTEEACSLLEEVINKGIK 539
+ D++ I F CN K + A S L+ + KGI+
Sbjct: 437 IFN-----------DSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIE 481
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 133/317 (41%), Gaps = 39/317 (12%)
Query: 256 TQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNA--ETYNILVFGWCRVRSPTRG 313
+P+ F+L + A CK + A L ++MR + A ETY ++ + + +
Sbjct: 270 AEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEA 329
Query: 314 MKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIM 373
+++++EM+ G + ++ YCK + +A+DLF M +G +P +++M
Sbjct: 330 VRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGL---APDKVMFSVM 386
Query: 374 IVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEG---------------------- 411
+ +N ME+ + M S P +I+G
Sbjct: 387 VEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWI 446
Query: 412 ------------VCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKL 459
C GK+D A FL+ M KG P++V YN + C K + A +
Sbjct: 447 AHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSI 506
Query: 460 YGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFN 519
+ M+E P+ TY++LI FF+ D A++ +M + Y +I GL
Sbjct: 507 FSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCK 566
Query: 520 CNKTEEACSLLEEVINK 536
+T +A +L+ +I +
Sbjct: 567 VGQTSKAKEMLQNLIKE 583
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 127/278 (45%), Gaps = 5/278 (1%)
Query: 263 FNLLLDALCKCCLVEYAEGLYKKM--RKIINTNAETYNILVFGWCRVRSPTRGMKLLEEM 320
+N +++ LCK A+ + + + K + + +YN ++ G+ +V ++ EM
Sbjct: 557 YNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREM 616
Query: 321 IQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQN 380
+ G P+ T+ + ++ +CK+ + A+++ M++ + P Y +I +
Sbjct: 617 SENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPA---YGALIDGFCKK 673
Query: 381 DRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTY 440
+ M+ + L + G +P+V+ Y +I G GK+D A ++M N G D+ TY
Sbjct: 674 NDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTY 733
Query: 441 NCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEK 500
+ L + A LY +++L +P + +L++ + A + +EM+K
Sbjct: 734 TTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKK 793
Query: 501 RGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGI 538
+ + Y +I G EA L +E++ KGI
Sbjct: 794 KDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGI 831
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 136/314 (43%), Gaps = 5/314 (1%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMK 315
+P +++L+D K + A + +M N YN ++ G C+V ++ +
Sbjct: 516 EPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKE 575
Query: 316 LLEEMIQLGHRPDNFT-YNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMI 374
+L+ +I+ + T YN+ +D + K G AV+ + M G SP T+ +I
Sbjct: 576 MLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGK---SPNVVTFTSLI 632
Query: 375 VTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYP 434
+++RM+ ++ M S D+ Y +I+G C + AY E+ G
Sbjct: 633 NGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLM 692
Query: 435 PDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFET 494
P++ YN + + K + A+ LY +M+ + TY +I + + + A +
Sbjct: 693 PNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDL 752
Query: 495 WQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSD 554
+ E+ G D + V++ GL + +A +LEE+ K + + + +
Sbjct: 753 YSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHR 812
Query: 555 LGDLHAIHKLSDHM 568
G+L+ +L D M
Sbjct: 813 EGNLNEAFRLHDEM 826
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 118/282 (41%), Gaps = 8/282 (2%)
Query: 236 TEKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINT-NA 294
T K +Q K+KR + ++N ++D K + A Y++M + + N
Sbjct: 570 TSKAKEMLQNLIKEKRYSMSC----TSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNV 625
Query: 295 ETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEF 354
T+ L+ G+C+ +++ EM + + D Y +D +CK + A LF
Sbjct: 626 VTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSE 685
Query: 355 MRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCL 414
+ G P Y +I +M+ L M++ G D+ TY +I+G+
Sbjct: 686 LPELGLM---PNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLK 742
Query: 415 CGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQT 474
G I+ A E+ + G PD + + + L + +A K+ M + P+V
Sbjct: 743 DGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLL 802
Query: 475 YNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEG 516
Y+ +I+ + + AF EM ++G D + +++ G
Sbjct: 803 YSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 76/176 (43%), Gaps = 1/176 (0%)
Query: 366 TAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFL 425
T + + ++ +N RM+ G M+ +P V +++ + IDEA +
Sbjct: 168 TPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIY 227
Query: 426 EEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEM 485
+M G D VT +R +K EEA+K++ R++ P +++ + +
Sbjct: 228 NKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKT 287
Query: 486 DDPDGAFETWQEME-KRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKL 540
D A + +EM K G +TY +I EEA +++E++ GI +
Sbjct: 288 PDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPM 343
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 129/285 (45%), Gaps = 8/285 (2%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLL 317
P I+ +N+LLDALCK + A L+K ++ + TYNIL+ G C+ R ++
Sbjct: 152 PGIDTYNILLDALCKSGHTDNAIELFKHLKSRVKPELMTYNILINGLCKSRRVGSVDWMM 211
Query: 318 EEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTL 377
E+ + G+ P+ TY T L Y K I + + LF M+ +G T ++ L
Sbjct: 212 RELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFAN---CAVVSAL 268
Query: 378 AQNDRMEECFKLMGYMISSGCLP-DVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
+ R EE ++ M ++ SG D+ +Y ++ G +D LEE+ KG PD
Sbjct: 269 IKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPD 328
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQ 496
T+ + L + + A K + E+ PSV T N LI + D A +
Sbjct: 329 DYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFA 388
Query: 497 EMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLP 541
ME R D TY ++ L + A LL NKG+K+P
Sbjct: 389 SMEVR----DEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIP 429
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 126/294 (42%), Gaps = 40/294 (13%)
Query: 282 LYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCK 341
+ + + K + + NI V C+ R+ R LL + I+LG PD TYNT + Y +
Sbjct: 1 MVRGLMKFPGISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTR 60
Query: 342 AGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPD 401
I EA + MR G P TY +I A+N + +L M+ SG PD
Sbjct: 61 FIGIDEAYAVTRRMREAG---IEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPD 117
Query: 402 VTTYKDIIEGVCLCGKIDEAYKFL-EEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLY 460
+ +Y ++ G+ EA+K L E++ G P I TYN L LC + ++ A++L+
Sbjct: 118 MWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELF 177
Query: 461 GRMIELRCIPSVQTYNMLIS-----------------------------------MFFEM 485
+ ++ R P + TYN+LI+ M+F+
Sbjct: 178 -KHLKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKT 236
Query: 486 DDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
+ + + +M+K G D C ++ L + EEA + E++ G +
Sbjct: 237 KRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTR 290
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 139/313 (44%), Gaps = 42/313 (13%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSP 310
IR+ P++ +N L+ + ++ A + ++MR+ I + TYN L+ G +
Sbjct: 40 IRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLML 99
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVD-LFEFMRTKGSTISSPTAKT 369
R ++L +EM+ G PD ++YNT + Y K G EA L E + G P T
Sbjct: 100 NRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLV---PGIDT 156
Query: 370 YAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMG 429
Y I++ L ++ + +L ++ S P++ TY +I G+C ++ + E+
Sbjct: 157 YNILLDALCKSGHTDNAIELFKHL-KSRVKPELMTYNILINGLCKSRRVGSVDWMMRELK 215
Query: 430 NKGYPPDIVTYNCFLRVLCDNKKSEEALKLY-------------------------GRMI 464
GY P+ VTY L++ K+ E+ L+L+ GR
Sbjct: 216 KSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAE 275
Query: 465 EL-RCI----------PSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVM 513
E C+ + +YN L++++F+ + D + +E+E +G D T+ ++
Sbjct: 276 EAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTII 335
Query: 514 IEGLFNCNKTEEA 526
+ GL N T A
Sbjct: 336 VNGLLNIGNTGGA 348
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 134/287 (46%), Gaps = 6/287 (2%)
Query: 253 RVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPT 311
R P++ ++N ++ C+ +E A L +M+ + + T+ IL+ +C+
Sbjct: 170 RNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMD 229
Query: 312 RGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYA 371
M L+EM +G D Y + + +C G + LF+ + +G SP A TY
Sbjct: 230 EAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGD---SPCAITYN 286
Query: 372 IMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNK 431
+I + +++E ++ +MI G P+V TY +I+G+C GK EA + L M K
Sbjct: 287 TLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEK 346
Query: 432 GYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGA 491
P+ VTYN + LC + +A+++ M + R P TYN+L+ D D A
Sbjct: 347 DEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEA 406
Query: 492 FETWQEMEKRGCNLDTD--TYCVMIEGLFNCNKTEEACSLLEEVINK 536
+ M K D D +Y +I GL N+ +A + + ++ K
Sbjct: 407 SKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEK 453
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 105/244 (43%), Gaps = 38/244 (15%)
Query: 293 NAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLF 352
N +NIL+ G CR + + LL EM + PD F+YNT + +C
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFC------------ 188
Query: 353 EFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGV 412
+ +E+ +L M SGC + T+ +I+
Sbjct: 189 --------------------------EGKELEKALELANEMKGSGCSWSLVTWGILIDAF 222
Query: 413 CLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSV 472
C GK+DEA FL+EM G D+V Y +R CD + + L+ ++E P
Sbjct: 223 CKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCA 282
Query: 473 QTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEE 532
TYN LI F ++ A E ++ M +RG + TY +I+GL KT+EA LL
Sbjct: 283 ITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNL 342
Query: 533 VINK 536
+I K
Sbjct: 343 MIEK 346
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 133/334 (39%), Gaps = 37/334 (11%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSP 310
I +P + + L+D LC + A L M K NA TYNI++ C+
Sbjct: 309 IERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLV 368
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
++++E M + RPDN TYN L C G + EA L M K S+ + P +Y
Sbjct: 369 ADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM-LKDSSYTDPDVISY 427
Query: 371 AIMIVTLAQNDRMEECFKL---------MGYMISSGCLPDVT------------------ 403
+I L + +R+ + + G +++ L + T
Sbjct: 428 NALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISD 487
Query: 404 --------TYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEE 455
TY +I+G C G ++ A L +M P + YNC L LC ++
Sbjct: 488 SKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQ 547
Query: 456 ALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIE 515
A +L+ M P V ++N++I + D A M + G + D TY +I
Sbjct: 548 AWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLIN 607
Query: 516 GLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFL 549
+EA S +++++ G + DS L
Sbjct: 608 RFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVL 641
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 136/314 (43%), Gaps = 41/314 (13%)
Query: 263 FNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMI 321
+N L+ CK ++ A +++ M + + N TY L+ G C V ++LL MI
Sbjct: 285 YNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMI 344
Query: 322 QLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQND 381
+ P+ TYN ++ CK G++ +AV++ E M+ + + P TY I++ L
Sbjct: 345 EKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRT---RPDNITYNILLGGLCAKG 401
Query: 382 RMEECFKLMGYMI--SSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVT 439
++E KL+ M+ SS PDV +Y +I G+C ++ +A + + K D VT
Sbjct: 402 DLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVT 461
Query: 440 YNCFLRVLCDNKKSEEALKLYGRMIELRCI------------------------------ 469
N L +A++L+ ++ + + +
Sbjct: 462 TNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMR 521
Query: 470 -----PSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTE 524
PSV YN L+S + D A+ ++EM++ D ++ +MI+G +
Sbjct: 522 VSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIK 581
Query: 525 EACSLLEEVINKGI 538
A SLL + G+
Sbjct: 582 SAESLLVGMSRAGL 595
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 118/269 (43%), Gaps = 6/269 (2%)
Query: 256 TQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGM 314
T P++ ++N L+ LCK + A +Y + K+ + T NIL+ + + M
Sbjct: 420 TDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAM 479
Query: 315 KLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMI 374
+L +++ ++ TY +D +CK GM+ A L MR + P+ Y ++
Sbjct: 480 ELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRV---SELQPSVFDYNCLL 536
Query: 375 VTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYP 434
+L + +++ ++L M PDV ++ +I+G G I A L M G
Sbjct: 537 SSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLS 596
Query: 435 PDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFET 494
PD+ TY+ + +EA+ + +M++ P + ++ + D E
Sbjct: 597 PDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTEL 656
Query: 495 WQEMEKRGCNLDTDTYCVMIEGLFNCNKT 523
+++ + LD + C +++ + CN +
Sbjct: 657 VKKLVDKDIVLDKELTCTVMD--YMCNSS 683
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 86/185 (46%), Gaps = 6/185 (3%)
Query: 387 FKLMGYMISSGCLPDVTTYKDIIEGVCL---CGKIDEAYKFLEEMGNKGYPPDIVTYNCF 443
F ++ M+ G +V + +++G+C CGK A L EM PD+ +YN
Sbjct: 127 FGVLALMLKRGFAFNVYNHNILLKGLCRNLECGK---AVSLLREMRRNSLMPDVFSYNTV 183
Query: 444 LRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGC 503
+R C+ K+ E+AL+L M C S+ T+ +LI F + D A +EM+ G
Sbjct: 184 IRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGL 243
Query: 504 NLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHK 563
D Y +I G +C + + +L +EV+ +G +++ + LG L +
Sbjct: 244 EADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASE 303
Query: 564 LSDHM 568
+ + M
Sbjct: 304 IFEFM 308
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 96/224 (42%), Gaps = 4/224 (1%)
Query: 345 ITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTT 404
+ AV +F+ GS+++ ++ L ++ E F M+ + + +
Sbjct: 54 LKNAVSVFQQAVDSGSSLAFAGNN----LMAKLVRSRNHELAFSFYRKMLETDTFINFVS 109
Query: 405 YKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMI 464
++E K A+ L M +G+ ++ +N L+ LC N + +A+ L M
Sbjct: 110 LSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMR 169
Query: 465 ELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTE 524
+P V +YN +I F E + + A E EM+ GC+ T+ ++I+ K +
Sbjct: 170 RNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMD 229
Query: 525 EACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHM 568
EA L+E+ G++ + S + D G+L L D +
Sbjct: 230 EAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV 273
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 106/442 (23%), Positives = 196/442 (44%), Gaps = 23/442 (5%)
Query: 136 NNLEKALDQLAIPLSTPLVTGVLHRLRYDE-KIAFRFFTWAGNQENYSHEPCAYNDMMDI 194
+NLEK L + L + + VL R ++ + RFF WAG ++ H Y DI
Sbjct: 45 SNLEKELASANVQLDSSCINEVLRRCDPNQFQSGLRFFIWAGTLSSHRHSAYMYTKACDI 104
Query: 195 LSSTKYKVKQFRIVCDMLDYMK---RKNKSTVPVEVLMTILRKYTEKYLTHVQKFAKKKR 251
L + R D++ Y+ RK + V V+ + +L + L + +K
Sbjct: 105 L--------KIRAKPDLIKYVIESYRKEECFVNVKTMRIVLTLCNQANLADEALWVLRKF 156
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSP 310
+ A+NL++ + A+ L K+M + + + TY ++ G+C
Sbjct: 157 PEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKI 216
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLF-EFMRTKGSTISSPTAKT 369
+L +EM + ++ TY+ L+ CK+G + A++L E + G + SP A T
Sbjct: 217 DDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVT 276
Query: 370 YAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMG 429
Y ++I + R+EE ++ M + GC+P+ T +I+GV + DE K L ++
Sbjct: 277 YTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVL---ENDEDVKALSKLI 333
Query: 430 NKGYPPDIVTYN-CFLRV---LCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEM 485
+K V+ + CF L K+ EEA K++ M+ P + + +
Sbjct: 334 DKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLL 393
Query: 486 DDPDGAFETWQEMEKRGC--NLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYK 543
+ F +QE+EK+ +D+D + V++ GL + EA L + +++K ++L
Sbjct: 394 ERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGLCQQGNSWEAAKLAKSMLDKKMRLKVS 453
Query: 544 KFDSFLIQLSDLGDLHAIHKLS 565
+ + L GD + + S
Sbjct: 454 HVEKIIEALKKTGDEDLMSRFS 475
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 98/216 (45%), Gaps = 7/216 (3%)
Query: 368 KTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEE 427
KT I++ Q + +E ++ D Y +I G ++ A ++E
Sbjct: 131 KTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKE 190
Query: 428 MGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDD 487
M G PD++TY + C+ K ++A +L M + C+ + TY+ ++ + D
Sbjct: 191 MDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGD 250
Query: 488 PDGAFETWQEMEKR-GCNL---DTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYK 543
+ A E EMEK G L + TY ++I+ + EEA +L+ + N+G +P +
Sbjct: 251 MERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGC-MPNR 309
Query: 544 KFDSFLIQ--LSDLGDLHAIHKLSDHMRKFYNPAMA 577
LIQ L + D+ A+ KL D + K +++
Sbjct: 310 VTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLS 345
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 126/273 (46%), Gaps = 5/273 (1%)
Query: 263 FNLLLDALCKCCLVEYAEGLYKKMR--KIINTNAETYNILVFGWCRVRSPTRGMKLLEEM 320
FN L+D LCK ++ AE L +M+ + NA TYN L+ G+CR +++ M
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 321 IQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQN 380
+ +P+ T NT + C+ + AV F M +G TY +I
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGV---KGNVVTYMTLIHACCSV 489
Query: 381 DRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTY 440
+E+ M+ +GC PD Y +I G+C + +A + +E++ G+ D++ Y
Sbjct: 490 SNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAY 549
Query: 441 NCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEK 500
N + + CD +E+ ++ M + P TYN LIS F + D + ++M +
Sbjct: 550 NMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRE 609
Query: 501 RGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEV 533
G + TY +I+ + + +EA L +++
Sbjct: 610 DGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 149/326 (45%), Gaps = 15/326 (4%)
Query: 255 KTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRG 313
KT E FN LL L + + L KM ++ I + T IL+ C+ R
Sbjct: 289 KTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEA 348
Query: 314 MKLLEEMIQLGHRPDN--------FTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSP 365
+++ E+M G R D+ +NT +D CK G + EA +L +R K +P
Sbjct: 349 LEVFEKM--RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL--VRMKLEERCAP 404
Query: 366 TAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFL 425
A TY +I + ++E +++ M P+V T I+ G+C ++ A F
Sbjct: 405 NAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFF 464
Query: 426 EEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEM 485
+M +G ++VTY + C E+A+ Y +M+E C P + Y LIS ++
Sbjct: 465 MDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQV 524
Query: 486 DDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLF-NCNKTEEACSLLEEVINKGIKLPYKK 544
A +++++ G +LD Y ++I GLF + N TE+ +L ++ +G K
Sbjct: 525 RRDHDAIRVVEKLKEGGFSLDLLAYNMLI-GLFCDKNNTEKVYEMLTDMEKEGKKPDSIT 583
Query: 545 FDSFLIQLSDLGDLHAIHKLSDHMRK 570
+++ + D ++ ++ + MR+
Sbjct: 584 YNTLISFFGKHKDFESVERMMEQMRE 609
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 145/324 (44%), Gaps = 13/324 (4%)
Query: 254 VKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR-------KIINTNAETYNILVFGWCR 306
VK +P++ +L++ LCK V+ A +++KMR +I ++ +N L+ G C+
Sbjct: 323 VKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCK 382
Query: 307 VRSPTRGMKLLEEMIQLGHR--PDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISS 364
V +LL M +L R P+ TYN +D YC+AG + A ++ R K I
Sbjct: 383 VGRLKEAEELLVRM-KLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVS--RMKEDEIK- 438
Query: 365 PTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKF 424
P T ++ + ++ + M G +V TY +I C +++A +
Sbjct: 439 PNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYW 498
Query: 425 LEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFE 484
E+M G PD Y + LC ++ +A+++ ++ E + YNMLI +F +
Sbjct: 499 YEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCD 558
Query: 485 MDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKK 544
++ + +E +MEK G D+ TY +I E ++E++ G+
Sbjct: 559 KNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTT 618
Query: 545 FDSFLIQLSDLGDLHAIHKLSDHM 568
+ + + +G+L KL M
Sbjct: 619 YGAVIDAYCSVGELDEALKLFKDM 642
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 145/331 (43%), Gaps = 5/331 (1%)
Query: 240 LTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYN 298
L ++ + ++ + P +N L+D C+ +E A+ + +M++ I N T N
Sbjct: 386 LKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVN 445
Query: 299 ILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTK 358
+V G CR + +M + G + + TY T + C + +A+ +E M
Sbjct: 446 TIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEA 505
Query: 359 GSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKI 418
G SP AK Y +I L Q R + +++ + G D+ Y +I C
Sbjct: 506 G---CSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNT 562
Query: 419 DEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNML 478
++ Y+ L +M +G PD +TYN + +K E ++ +M E P+V TY +
Sbjct: 563 EKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAV 622
Query: 479 ISMFFEMDDPDGAFETWQEMEKRG-CNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKG 537
I + + + D A + +++M N +T Y ++I +A SL EE+ K
Sbjct: 623 IDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKM 682
Query: 538 IKLPYKKFDSFLIQLSDLGDLHAIHKLSDHM 568
++ + +++ L++ + KL D M
Sbjct: 683 VRPNVETYNALFKCLNEKTQGETLLKLMDEM 713
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 114/254 (44%), Gaps = 5/254 (1%)
Query: 266 LLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLG 324
L+ A C VE A Y+KM + + +A+ Y L+ G C+VR ++++E++ + G
Sbjct: 482 LIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGG 541
Query: 325 HRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRME 384
D YN + +C + ++ M +G P + TY +I ++ E
Sbjct: 542 FSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGK---KPDSITYNTLISFFGKHKDFE 598
Query: 385 ECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMG-NKGYPPDIVTYNCF 443
++M M G P VTTY +I+ C G++DEA K ++MG + P+ V YN
Sbjct: 599 SVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNIL 658
Query: 444 LRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGC 503
+ +AL L M P+V+TYN L E + + EM ++ C
Sbjct: 659 INAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSC 718
Query: 504 NLDTDTYCVMIEGL 517
+ T +++E L
Sbjct: 719 EPNQITMEILMERL 732
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 125/284 (44%), Gaps = 5/284 (1%)
Query: 255 KTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRK-IINTNAETYNILVFGWCRVRSPTRG 313
+ +P + N ++ +C+ + A + M K + N TY L+ C V + +
Sbjct: 436 EIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKA 495
Query: 314 MKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIM 373
M E+M++ G PD Y + C+ +A+ + E ++ G ++ Y ++
Sbjct: 496 MYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLD---LLAYNML 552
Query: 374 IVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGY 433
I + E+ ++++ M G PD TY +I + + +E+M G
Sbjct: 553 IGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612
Query: 434 PPDIVTYNCFLRVLCDNKKSEEALKLYGRM-IELRCIPSVQTYNMLISMFFEMDDPDGAF 492
P + TY + C + +EALKL+ M + + P+ YN+LI+ F ++ + A
Sbjct: 613 DPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQAL 672
Query: 493 ETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINK 536
+EM+ + + +TY + + L + E L++E++ +
Sbjct: 673 SLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQ 716
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 126/273 (46%), Gaps = 5/273 (1%)
Query: 263 FNLLLDALCKCCLVEYAEGLYKKMR--KIINTNAETYNILVFGWCRVRSPTRGMKLLEEM 320
FN L+D LCK ++ AE L +M+ + NA TYN L+ G+CR +++ M
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 321 IQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQN 380
+ +P+ T NT + C+ + AV F M +G TY +I
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGV---KGNVVTYMTLIHACCSV 489
Query: 381 DRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTY 440
+E+ M+ +GC PD Y +I G+C + +A + +E++ G+ D++ Y
Sbjct: 490 SNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAY 549
Query: 441 NCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEK 500
N + + CD +E+ ++ M + P TYN LIS F + D + ++M +
Sbjct: 550 NMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRE 609
Query: 501 RGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEV 533
G + TY +I+ + + +EA L +++
Sbjct: 610 DGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 145/324 (44%), Gaps = 13/324 (4%)
Query: 254 VKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR-------KIINTNAETYNILVFGWCR 306
VK +P++ +L++ LCK V+ A ++++MR +I ++ +N L+ G C+
Sbjct: 323 VKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCK 382
Query: 307 VRSPTRGMKLLEEMIQLGHR--PDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISS 364
V +LL M +L R P+ TYN +D YC+AG + A ++ R K I
Sbjct: 383 VGRLKEAEELLVRM-KLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVS--RMKEDEIK- 438
Query: 365 PTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKF 424
P T ++ + ++ + M G +V TY +I C +++A +
Sbjct: 439 PNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYW 498
Query: 425 LEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFE 484
E+M G PD Y + LC ++ +A+++ ++ E + YNMLI +F +
Sbjct: 499 YEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCD 558
Query: 485 MDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKK 544
++ + +E +MEK G D+ TY +I E ++E++ G+
Sbjct: 559 KNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTT 618
Query: 545 FDSFLIQLSDLGDLHAIHKLSDHM 568
+ + + +G+L KL M
Sbjct: 619 YGAVIDAYCSVGELDEALKLFKDM 642
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 148/326 (45%), Gaps = 15/326 (4%)
Query: 255 KTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRG 313
KT E FN LL L + + L KM ++ I + T IL+ C+ R
Sbjct: 289 KTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEA 348
Query: 314 MKLLEEMIQLGHRPDN--------FTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSP 365
+++ E+M G R D+ +NT +D CK G + EA +L M+ + + P
Sbjct: 349 LEVFEQM--RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCV--P 404
Query: 366 TAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFL 425
A TY +I + ++E +++ M P+V T I+ G+C ++ A F
Sbjct: 405 NAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFF 464
Query: 426 EEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEM 485
+M +G ++VTY + C E+A+ Y +M+E C P + Y LIS ++
Sbjct: 465 MDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQV 524
Query: 486 DDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLF-NCNKTEEACSLLEEVINKGIKLPYKK 544
A +++++ G +LD Y ++I GLF + N E+ +L ++ +G K
Sbjct: 525 RRDHDAIRVVEKLKEGGFSLDLLAYNMLI-GLFCDKNNAEKVYEMLTDMEKEGKKPDSIT 583
Query: 545 FDSFLIQLSDLGDLHAIHKLSDHMRK 570
+++ + D ++ ++ + MR+
Sbjct: 584 YNTLISFFGKHKDFESVERMMEQMRE 609
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 145/331 (43%), Gaps = 5/331 (1%)
Query: 240 LTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYN 298
L ++ + ++ + P +N L+D C+ +E A+ + +M++ I N T N
Sbjct: 386 LKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVN 445
Query: 299 ILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTK 358
+V G CR + +M + G + + TY T + C + +A+ +E M
Sbjct: 446 TIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEA 505
Query: 359 GSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKI 418
G SP AK Y +I L Q R + +++ + G D+ Y +I C
Sbjct: 506 G---CSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNA 562
Query: 419 DEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNML 478
++ Y+ L +M +G PD +TYN + +K E ++ +M E P+V TY +
Sbjct: 563 EKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAV 622
Query: 479 ISMFFEMDDPDGAFETWQEMEKRG-CNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKG 537
I + + + D A + +++M N +T Y ++I +A SL EE+ K
Sbjct: 623 IDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKM 682
Query: 538 IKLPYKKFDSFLIQLSDLGDLHAIHKLSDHM 568
++ + +++ L++ + KL D M
Sbjct: 683 VRPNVETYNALFKCLNEKTQGETLLKLMDEM 713
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 124/282 (43%), Gaps = 5/282 (1%)
Query: 255 KTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRG 313
+ +P + N ++ +C+ + A + M K + N TY L+ C V + +
Sbjct: 436 EIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKA 495
Query: 314 MKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIM 373
M E+M++ G PD Y + C+ +A+ + E ++ G ++ Y ++
Sbjct: 496 MYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLD---LLAYNML 552
Query: 374 IVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGY 433
I + E+ ++++ M G PD TY +I + + +E+M G
Sbjct: 553 IGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612
Query: 434 PPDIVTYNCFLRVLCDNKKSEEALKLYGRM-IELRCIPSVQTYNMLISMFFEMDDPDGAF 492
P + TY + C + +EALKL+ M + + P+ YN+LI+ F ++ + A
Sbjct: 613 DPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQAL 672
Query: 493 ETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVI 534
+EM+ + + +TY + + L + E L++E++
Sbjct: 673 SLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMV 714
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 99/237 (41%), Gaps = 40/237 (16%)
Query: 266 LLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLG 324
L+ A C VE A Y+KM + + +A+ Y L+ G C+VR ++++E++ + G
Sbjct: 482 LIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGG 541
Query: 325 HRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRME 384
D YN + +C + ++ M +G P + TY +I ++ E
Sbjct: 542 FSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGK---KPDSITYNTLISFFGKHKDFE 598
Query: 385 ECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMG--NKGYP-------- 434
++M M G P VTTY +I+ C G++DEA K ++MG +K P
Sbjct: 599 SVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNIL 658
Query: 435 --------------------------PDIVTYNCFLRVLCDNKKSEEALKLYGRMIE 465
P++ TYN + L + + E LKL M+E
Sbjct: 659 INAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVE 715
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 113/247 (45%), Gaps = 3/247 (1%)
Query: 293 NAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLF 352
N +NIL+ +C+ + + K+ +E+ + +P ++NT ++ YCK G + E F
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG---F 295
Query: 353 EFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGV 412
+ + P TY+ +I L + ++M+ L M G +P+ + +I G
Sbjct: 296 RLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGH 355
Query: 413 CLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSV 472
G+ID + ++M +KG PDIV YN + C N A + MI P
Sbjct: 356 SRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDK 415
Query: 473 QTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEE 532
TY LI F D + A E +EM++ G LD + ++ G+ + +A L E
Sbjct: 416 ITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALRE 475
Query: 533 VINKGIK 539
++ GIK
Sbjct: 476 MLRAGIK 482
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 122/263 (46%), Gaps = 39/263 (14%)
Query: 253 RVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM--RKII-------------NTNAET- 296
+ +T+P++ ++ L++ALCK ++ A GL+ +M R +I + N E
Sbjct: 303 KSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEID 362
Query: 297 --------------------YNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTAL 336
YN LV G+C+ +++ MI+ G RPD TY T +
Sbjct: 363 LMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLI 422
Query: 337 DTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISS 396
D +C+ G + A+++ + M G + ++ ++ + + R+ + + + M+ +
Sbjct: 423 DGFCRGGDVETALEIRKEMDQNGIELDR---VGFSALVCGMCKEGRVIDAERALREMLRA 479
Query: 397 GCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEA 456
G PD TY +++ C G +K L+EM + G+ P +VTYN L LC + + A
Sbjct: 480 GIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNA 539
Query: 457 LKLYGRMIELRCIPSVQTYNMLI 479
L M+ + +P TYN L+
Sbjct: 540 DMLLDAMLNIGVVPDDITYNTLL 562
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 132/310 (42%), Gaps = 33/310 (10%)
Query: 262 AFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKLLEEM 320
FN+L++ CK + A+ ++ ++ ++ + ++N L+ G+C+V + G +L +M
Sbjct: 242 VFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQM 301
Query: 321 IQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKG--------------------- 359
+ RPD FTY+ ++ CK + A LF+ M +G
Sbjct: 302 EKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEI 361
Query: 360 -----------STISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDI 408
S P Y ++ +N + ++ MI G PD TY +
Sbjct: 362 DLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTL 421
Query: 409 IEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRC 468
I+G C G ++ A + +EM G D V ++ + +C + +A + M+
Sbjct: 422 IDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGI 481
Query: 469 IPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACS 528
P TY M++ F + D F+ +EM+ G TY V++ GL + + A
Sbjct: 482 KPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADM 541
Query: 529 LLEEVINKGI 538
LL+ ++N G+
Sbjct: 542 LLDAMLNIGV 551
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 120/263 (45%), Gaps = 8/263 (3%)
Query: 220 KSTVPVEVLMT-ILRKYTEKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEY 278
+ +P +V+ T ++ ++ + K + +K + QP+I +N L++ CK +
Sbjct: 339 RGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVA 398
Query: 279 AEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALD 337
A + M R+ + + TY L+ G+CR +++ +EM Q G D ++ +
Sbjct: 399 ARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVC 458
Query: 338 TYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSG 397
CK G + +A M G P TY +M+ + + FKL+ M S G
Sbjct: 459 GMCKEGRVIDAERALREMLRAG---IKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDG 515
Query: 398 CLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEAL 457
+P V TY ++ G+C G++ A L+ M N G PD +TYN L + + +
Sbjct: 516 HVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLE---GHHRHANSS 572
Query: 458 KLYGRMIELRCIPSVQTYNMLIS 480
K Y + E+ + + +Y +++
Sbjct: 573 KRYIQKPEIGIVADLASYKSIVN 595
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 105/253 (41%), Gaps = 16/253 (6%)
Query: 329 NFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRM---EE 385
F + + TY G I +A+ F R P ++ DRM
Sbjct: 170 GFLVDALMITYTDLGFIPDAIQCFRLSRKH--RFDVPIRGCGNLL-------DRMMKLNP 220
Query: 386 CFKLMGY---MISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNC 442
+ G+ ++ +G +V + ++ C G I +A K +E+ + P +V++N
Sbjct: 221 TGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNT 280
Query: 443 FLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRG 502
+ C +E +L +M + R P V TY+ LI+ + + DGA + EM KRG
Sbjct: 281 LINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRG 340
Query: 503 CNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIH 562
+ + +I G + + +++++KG++ +++ + GDL A
Sbjct: 341 LIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAAR 400
Query: 563 KLSDHM-RKFYNP 574
+ D M R+ P
Sbjct: 401 NIVDGMIRRGLRP 413
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 126/273 (46%), Gaps = 5/273 (1%)
Query: 263 FNLLLDALCKCCLVEYAEGLYKKMR--KIINTNAETYNILVFGWCRVRSPTRGMKLLEEM 320
FN L+D LCK ++ AE L +M+ + NA TYN L+ G+CR +++ M
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 321 IQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQN 380
+ +P+ T NT + C+ + AV F M +G TY +I
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGV---KGNVVTYMTLIHACCSV 489
Query: 381 DRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTY 440
+E+ M+ +GC PD Y +I G+C + +A + +E++ G+ D++ Y
Sbjct: 490 SNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAY 549
Query: 441 NCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEK 500
N + + CD +E+ ++ M + P TYN LIS F + D + ++M +
Sbjct: 550 NMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRE 609
Query: 501 RGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEV 533
G + TY +I+ + + +EA L +++
Sbjct: 610 DGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 145/324 (44%), Gaps = 13/324 (4%)
Query: 254 VKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR-------KIINTNAETYNILVFGWCR 306
VK +P++ +L++ LCK V+ A ++++MR +I ++ +N L+ G C+
Sbjct: 323 VKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCK 382
Query: 307 VRSPTRGMKLLEEMIQLGHR--PDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISS 364
V +LL M +L R P+ TYN +D YC+AG + A ++ R K I
Sbjct: 383 VGRLKEAEELLVRM-KLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVS--RMKEDEIK- 438
Query: 365 PTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKF 424
P T ++ + ++ + M G +V TY +I C +++A +
Sbjct: 439 PNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYW 498
Query: 425 LEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFE 484
E+M G PD Y + LC ++ +A+++ ++ E + YNMLI +F +
Sbjct: 499 YEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCD 558
Query: 485 MDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKK 544
++ + +E +MEK G D+ TY +I E ++E++ G+
Sbjct: 559 KNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTT 618
Query: 545 FDSFLIQLSDLGDLHAIHKLSDHM 568
+ + + +G+L KL M
Sbjct: 619 YGAVIDAYCSVGELDEALKLFKDM 642
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 148/326 (45%), Gaps = 15/326 (4%)
Query: 255 KTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRG 313
KT E FN LL L + + L KM ++ I + T IL+ C+ R
Sbjct: 289 KTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEA 348
Query: 314 MKLLEEMIQLGHRPDN--------FTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSP 365
+++ E+M G R D+ +NT +D CK G + EA +L M+ + + P
Sbjct: 349 LEVFEQM--RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCV--P 404
Query: 366 TAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFL 425
A TY +I + ++E +++ M P+V T I+ G+C ++ A F
Sbjct: 405 NAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFF 464
Query: 426 EEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEM 485
+M +G ++VTY + C E+A+ Y +M+E C P + Y LIS ++
Sbjct: 465 MDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQV 524
Query: 486 DDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLF-NCNKTEEACSLLEEVINKGIKLPYKK 544
A +++++ G +LD Y ++I GLF + N E+ +L ++ +G K
Sbjct: 525 RRDHDAIRVVEKLKEGGFSLDLLAYNMLI-GLFCDKNNAEKVYEMLTDMEKEGKKPDSIT 583
Query: 545 FDSFLIQLSDLGDLHAIHKLSDHMRK 570
+++ + D ++ ++ + MR+
Sbjct: 584 YNTLISFFGKHKDFESVERMMEQMRE 609
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 145/331 (43%), Gaps = 5/331 (1%)
Query: 240 LTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYN 298
L ++ + ++ + P +N L+D C+ +E A+ + +M++ I N T N
Sbjct: 386 LKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVN 445
Query: 299 ILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTK 358
+V G CR + +M + G + + TY T + C + +A+ +E M
Sbjct: 446 TIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEA 505
Query: 359 GSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKI 418
G SP AK Y +I L Q R + +++ + G D+ Y +I C
Sbjct: 506 G---CSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNA 562
Query: 419 DEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNML 478
++ Y+ L +M +G PD +TYN + +K E ++ +M E P+V TY +
Sbjct: 563 EKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAV 622
Query: 479 ISMFFEMDDPDGAFETWQEMEKRG-CNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKG 537
I + + + D A + +++M N +T Y ++I +A SL EE+ K
Sbjct: 623 IDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKM 682
Query: 538 IKLPYKKFDSFLIQLSDLGDLHAIHKLSDHM 568
++ + +++ L++ + KL D M
Sbjct: 683 VRPNVETYNALFKCLNEKTQGETLLKLMDEM 713
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 114/254 (44%), Gaps = 5/254 (1%)
Query: 266 LLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLG 324
L+ A C VE A Y+KM + + +A+ Y L+ G C+VR ++++E++ + G
Sbjct: 482 LIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGG 541
Query: 325 HRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRME 384
D YN + +C + ++ M +G P + TY +I ++ E
Sbjct: 542 FSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGK---KPDSITYNTLISFFGKHKDFE 598
Query: 385 ECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMG-NKGYPPDIVTYNCF 443
++M M G P VTTY +I+ C G++DEA K ++MG + P+ V YN
Sbjct: 599 SVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNIL 658
Query: 444 LRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGC 503
+ +AL L M P+V+TYN L E + + EM ++ C
Sbjct: 659 INAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSC 718
Query: 504 NLDTDTYCVMIEGL 517
+ T +++E L
Sbjct: 719 EPNQITMEILMERL 732
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 125/284 (44%), Gaps = 5/284 (1%)
Query: 255 KTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRG 313
+ +P + N ++ +C+ + A + M K + N TY L+ C V + +
Sbjct: 436 EIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKA 495
Query: 314 MKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIM 373
M E+M++ G PD Y + C+ +A+ + E ++ G ++ Y ++
Sbjct: 496 MYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLD---LLAYNML 552
Query: 374 IVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGY 433
I + E+ ++++ M G PD TY +I + + +E+M G
Sbjct: 553 IGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612
Query: 434 PPDIVTYNCFLRVLCDNKKSEEALKLYGRM-IELRCIPSVQTYNMLISMFFEMDDPDGAF 492
P + TY + C + +EALKL+ M + + P+ YN+LI+ F ++ + A
Sbjct: 613 DPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQAL 672
Query: 493 ETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINK 536
+EM+ + + +TY + + L + E L++E++ +
Sbjct: 673 SLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQ 716
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 131/297 (44%), Gaps = 10/297 (3%)
Query: 260 INAFNLLLDALCKCCLVEYAEGLY---KKMRKIINTNAETYNILVFGWCRVRSPTRGMKL 316
I + N L++ L +E A+ + K MR + N+ ++NIL+ G+ K+
Sbjct: 151 IQSLNTLINVLVDNGELEKAKSFFDGAKDMR--LRPNSVSFNILIKGFLDKCDWEAACKV 208
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
+EM+++ +P TYN+ + C+ + +A L E M K P A T+ +++
Sbjct: 209 FDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRI---RPNAVTFGLLMKG 265
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
L E KLM M GC P + Y ++ + G+IDEA L EM + PD
Sbjct: 266 LCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPD 325
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQ 496
+V YN + LC + EA ++ M C P+ TY M+I F ++D D
Sbjct: 326 VVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLN 385
Query: 497 EM-EKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQL 552
M R C T+ M+ GL + AC +LE + K + + + L L
Sbjct: 386 AMLASRHCPTPA-TFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDL 441
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 86/197 (43%), Gaps = 4/197 (2%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSP 310
+ ++ QP + +N L+ LC+ + A+ L + M +K I NA T+ +L+ G C
Sbjct: 213 LEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEY 272
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
KL+ +M G +P Y + K G I EA L M+ + P Y
Sbjct: 273 NEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRR---IKPDVVIY 329
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGN 430
I++ L R+ E ++++ M GC P+ TY+ +I+G C D L M
Sbjct: 330 NILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLA 389
Query: 431 KGYPPDIVTYNCFLRVL 447
+ P T+ C + L
Sbjct: 390 SRHCPTPATFVCMVAGL 406
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 108/250 (43%), Gaps = 6/250 (2%)
Query: 307 VRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPT 366
+ P + L + ++G R D +Y++ + K+ + +R +
Sbjct: 59 IEDPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRE-- 116
Query: 367 AKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLE 426
+ +I + +++ + + S C+ + + +I + G++++A F +
Sbjct: 117 -SLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFD 175
Query: 427 EMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMD 486
+ P+ V++N ++ D E A K++ M+E+ PSV TYN LI D
Sbjct: 176 GAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRND 235
Query: 487 DPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFD 546
D A ++M K+ + T+ ++++GL + EA L+ ++ +G K
Sbjct: 236 DMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCK---PGLV 292
Query: 547 SFLIQLSDLG 556
++ I +SDLG
Sbjct: 293 NYGILMSDLG 302
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 5/118 (4%)
Query: 248 KKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCR 306
KK+RI+ P++ +N+L++ LC C V A + +M+ K NA TY +++ G+CR
Sbjct: 318 KKRRIK----PDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCR 373
Query: 307 VRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISS 364
+ G+ +L M+ H P T+ + K G + A + E M K + S
Sbjct: 374 IEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGS 431
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 117/251 (46%), Gaps = 16/251 (6%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-------INTNAETYNILVFGWCRVRS 309
+P + LL LCK A L K +R I I +A Y LV C+ +
Sbjct: 103 KPNVAHSTQLLYDLCK------ANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGN 156
Query: 310 PTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKT 369
M+L+E+M G+ + TYN + C G + +++ E + KG +P A T
Sbjct: 157 VGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGL---APNAFT 213
Query: 370 YAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMG 429
Y+ ++ + +E KL+ +I G P++ +Y ++ G C G+ D+A E+
Sbjct: 214 YSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELP 273
Query: 430 NKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPD 489
KG+ ++V+YN LR LC + + EEA L M PSV TYN+LI+ +
Sbjct: 274 AKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTE 333
Query: 490 GAFETWQEMEK 500
A + +EM K
Sbjct: 334 QALQVLKEMSK 344
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 131/273 (47%), Gaps = 15/273 (5%)
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
LE ++ GH+P+ L CKA + +A+ + E M + G P A Y ++
Sbjct: 94 LESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGII---PDASAYTYLVNQ 150
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
L + + +L+ M G + TY ++ G+C+ G ++++ +F+E + KG P+
Sbjct: 151 LCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPN 210
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQ 496
TY+ L + ++EA+KL +I P++ +YN+L++ F + D A ++
Sbjct: 211 AFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFR 270
Query: 497 EMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQ-LSDL 555
E+ +G + +Y +++ L + EEA SLL E ++ G + P + LI L+
Sbjct: 271 ELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAE-MDGGDRAPSVVTYNILINSLAFH 329
Query: 556 G----DLHAIHKLSDHMRKF------YNPAMAR 578
G L + ++S +F YNP +AR
Sbjct: 330 GRTEQALQVLKEMSKGNHQFRVTATSYNPVIAR 362
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 123/278 (44%), Gaps = 6/278 (2%)
Query: 263 FNLLLDALCKC-CLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMI 321
+N L+ LC L + + + + M+K + NA TY+ L+ + R +KLL+E+I
Sbjct: 179 YNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEII 238
Query: 322 QLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQND 381
G P+ +YN L +CK G +A+ LF + KG +Y I++ L +
Sbjct: 239 VKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGF---KANVVSYNILLRCLCCDG 295
Query: 382 RMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEM--GNKGYPPDIVT 439
R EE L+ M P V TY +I + G+ ++A + L+EM GN + +
Sbjct: 296 RWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATS 355
Query: 440 YNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEME 499
YN + LC K + +K MI RC P+ TYN + S+ AF Q +
Sbjct: 356 YNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLS 415
Query: 500 KRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKG 537
+ D Y +I L T A LL E+ G
Sbjct: 416 NKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCG 453
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 135/314 (42%), Gaps = 38/314 (12%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMK 315
+P + ++N+LL CK + A L++++ K N +YNIL+ C
Sbjct: 243 EPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANS 302
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
LL EM P TYN +++ G +A+ + + M +KG+ TA +Y +I
Sbjct: 303 LLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEM-SKGNHQFRVTATSYNPVIA 361
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTY------------------------------ 405
L + +++ K + MI C P+ TY
Sbjct: 362 RLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCC 421
Query: 406 -----KDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLY 460
K +I +C G A++ L EM G+ PD TY+ +R LC A+++
Sbjct: 422 THDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVL 481
Query: 461 GRMIELR-CIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFN 519
M E C P+V +N +I ++ D A E ++ M ++ + TY +++EG+ +
Sbjct: 482 SIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAH 541
Query: 520 CNKTEEACSLLEEV 533
++ E A +L+E+
Sbjct: 542 EDELELAKEVLDEL 555
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 117/248 (47%), Gaps = 7/248 (2%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMRK---IINTNAETYNILVFGWCRVRSPTRGM 314
P + +N+L+++L E A + K+M K A +YN ++ C+ +
Sbjct: 314 PSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVV 373
Query: 315 KLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMI 374
K L+EMI +P+ TYN A+ + C+ ++ + F +++ + T Y +I
Sbjct: 374 KCLDEMIYRRCKPNEGTYN-AIGSLCEHN--SKVQEAFYIIQSLSNKQKCCTHDFYKSVI 430
Query: 375 VTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMG-NKGY 433
+L + F+L+ M G PD TY +I G+CL G A + L M ++
Sbjct: 431 TSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENC 490
Query: 434 PPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFE 493
P + +N + LC ++++ A++++ M+E + +P+ TY +L+ D+ + A E
Sbjct: 491 KPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKE 550
Query: 494 TWQEMEKR 501
E+ R
Sbjct: 551 VLDELRLR 558
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 35/188 (18%)
Query: 350 DLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDII 409
D F + + + P ++ L + +R+++ +++ M+SSG +PD + Y ++
Sbjct: 89 DSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLV 148
Query: 410 EGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCI 469
+C G + A + +E+M + GYP + VTYN +R LC ++L+ R+++
Sbjct: 149 NQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLA 208
Query: 470 PSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSL 529
P+ TY+ L+ ++ +RG T+EA L
Sbjct: 209 PNAFTYSFLLEAAYK---------------ERG--------------------TDEAVKL 233
Query: 530 LEEVINKG 537
L+E+I KG
Sbjct: 234 LDEIIVKG 241
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 144/359 (40%), Gaps = 42/359 (11%)
Query: 264 NLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQ 322
N +L LCK + A L KM + I N +YN ++ G CR ++ + +++
Sbjct: 447 NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILE 506
Query: 323 LGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDR 382
G +P+N+TY+ +D + A+++ M + ++ +T + + Q +
Sbjct: 507 KGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSK 566
Query: 383 MEE-----------CFKLMGY----------------------MISSGCLPDVTTYKDII 409
E C M Y M +G P+V TY ++
Sbjct: 567 ARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLM 626
Query: 410 EGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCI 469
G+C ++D+A + +EM NKG DI Y + C E A L+ ++E
Sbjct: 627 NGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLN 686
Query: 470 PSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSL 529
PS YN LIS F + + A + +++M K G D TY +I+GL A L
Sbjct: 687 PSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASEL 746
Query: 530 LEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMRK--------FYNPAMARRY 580
E+ G+ + + LS G + K+ + M+K YN +A Y
Sbjct: 747 YTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHY 805
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 135/323 (41%), Gaps = 39/323 (12%)
Query: 250 KRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR--KIINTNAETYNILVFGWCRV 307
+ I +P+ ++L + A CK + A L ++M+ K+ + ETY ++ +
Sbjct: 258 RAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQ 317
Query: 308 RSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTA 367
+ ++L +EM+ G + + + +CK + A+ LF+ M +G SP +
Sbjct: 318 GNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGP---SPNS 374
Query: 368 KTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEG---------------- 411
T++++I +N ME+ + M G P V II+G
Sbjct: 375 VTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDE 434
Query: 412 ------------------VCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKS 453
+C GK DEA + L +M ++G P++V+YN + C K
Sbjct: 435 SFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNM 494
Query: 454 EEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVM 513
+ A ++ ++E P+ TY++LI F D A E M ++ Y +
Sbjct: 495 DLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTI 554
Query: 514 IEGLFNCNKTEEACSLLEEVINK 536
I GL +T +A LL +I +
Sbjct: 555 INGLCKVGQTSKARELLANMIEE 577
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 115/269 (42%), Gaps = 4/269 (1%)
Query: 262 AFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKLLEEM 320
++N ++D K ++ A Y++M I+ N TY L+ G C+ + +++ +EM
Sbjct: 586 SYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEM 645
Query: 321 IQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQN 380
G + D Y +D +CK + A LF + +G S P Y +I
Sbjct: 646 KNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPI---YNSLISGFRNL 702
Query: 381 DRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTY 440
M L M+ G D+ TY +I+G+ G + A + EM G PD + Y
Sbjct: 703 GNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIY 762
Query: 441 NCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEK 500
+ L + + +K++ M + P+V YN +I+ + + D AF EM
Sbjct: 763 TVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLD 822
Query: 501 RGCNLDTDTYCVMIEGLFNCNKTEEACSL 529
+G D T+ +++ G + A SL
Sbjct: 823 KGILPDGATFDILVSGQVGNLQPVRAASL 851
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 127/314 (40%), Gaps = 45/314 (14%)
Query: 290 INTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHR-PDNFTYNTALDTYCKAGMITEA 348
I N Y ++ G C+V ++ +LL MI+ +YN+ +D + K G + A
Sbjct: 544 IEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSA 603
Query: 349 VDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDI 408
V +E M G SP TY ++ L +N+RM++ ++ M + G D+ Y +
Sbjct: 604 VAAYEEMCGNGI---SPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGAL 660
Query: 409 IEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIE--L 466
I+G C ++ A E+ +G P YN + + AL LY +M++ L
Sbjct: 661 IDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGL 720
Query: 467 RCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGL--------- 517
RC + TY LI + + A E + EM+ G D Y V++ GL
Sbjct: 721 RC--DLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKV 778
Query: 518 --------------------------FNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQ 551
+ +EA L +E+++KGI FD ++
Sbjct: 779 VKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFD--ILV 836
Query: 552 LSDLGDLHAIHKLS 565
+G+L + S
Sbjct: 837 SGQVGNLQPVRAAS 850
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/403 (21%), Positives = 148/403 (36%), Gaps = 55/403 (13%)
Query: 154 VTGVLHRLRYDEKIAFRFFTWA----GNQENYS----------HEPCAYNDMMDIL---S 196
V VL R + + A RF+ WA G+ E+ P Y D+L
Sbjct: 75 VIDVLLNRRNNPEAALRFYNWARPWRGSFEDGDVFWVLIHILVSSPETYGRASDLLIRYV 134
Query: 197 STKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEKYLTHVQKFAKKKRIRVKT 256
ST ++ L + V +L Y++ T + + +
Sbjct: 135 STSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDV 194
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMK 315
P N L AL + + A+ LY +M I ++ + T +L+ R P ++
Sbjct: 195 IPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALE 254
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
+L I+ G PD+ Y+ A+ CK + A L M+ K
Sbjct: 255 VLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEK----------------- 297
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
KL C+P TY +I G +D+A + +EM + G
Sbjct: 298 ------------KL--------CVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISM 337
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
++V + C N AL L+ +M + P+ T+++LI F + + + A E +
Sbjct: 338 NVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFY 397
Query: 496 QEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGI 538
++ME G +I+G K EEA L +E G+
Sbjct: 398 KKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL 440
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 145/335 (43%), Gaps = 36/335 (10%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMK 315
+P+I AF + +D LCK ++ A + K++ I+ ++ + + ++ G+C+V P +K
Sbjct: 303 RPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIK 362
Query: 316 LL--------------------------------EEMIQLGHRPDNFTYNTALDTYCKAG 343
L+ +E+ +LG PD Y T +D YC G
Sbjct: 363 LIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLG 422
Query: 344 MITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVT 403
+A F + G+ P+ T I+I ++ + + + M + G DV
Sbjct: 423 RTDKAFQYFGALLKSGN---PPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVV 479
Query: 404 TYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRM 463
TY +++ G ++++ ++ ++EM + G PD+ TYN + + +EA ++ +
Sbjct: 480 TYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISEL 539
Query: 464 IELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKT 523
I +PS + +I F + D AF W M D T ++ G +
Sbjct: 540 IRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRM 599
Query: 524 EEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDL 558
E+A L ++++ G+K +++ + +GD+
Sbjct: 600 EKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDI 634
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 125/281 (44%), Gaps = 7/281 (2%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWC-RVRSPTRGMKL 316
P+ + ++D C + A + + K N + T + ++ G C R S + +
Sbjct: 406 PDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESV 465
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
M G + D TYN + Y K + + +L + MR+ G SP TY I+I +
Sbjct: 466 FRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGI---SPDVATYNILIHS 522
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
+ ++E +++ +I G +P + D+I G G EA+ M + PD
Sbjct: 523 MVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPD 582
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQ 496
+VT + L C ++ E+A+ L+ ++++ P V YN LI + + D + A E
Sbjct: 583 VVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIG 642
Query: 497 EMEKRGCNLDTDTYCVMIEGLFN---CNKTEEACSLLEEVI 534
M +RG + T+ ++ GL N A LLEE+I
Sbjct: 643 LMVQRGMLPNESTHHALVLGLEGKRFVNSETHASMLLEEII 683
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 112/293 (38%), Gaps = 44/293 (15%)
Query: 277 EYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTAL 336
E+ E + + R + NA ++ + +C +G +LL M G RPD + +
Sbjct: 257 EFVEHMLSRGRHL---NAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFI 313
Query: 337 DTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISS 396
D CKAG + EA + FKL + IS
Sbjct: 314 DKLCKAGFLKEATSVL----------------------------------FKLKLFGISQ 339
Query: 397 GCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEA 456
D + +I+G C GK +EA K + + P+I Y+ FL +C A
Sbjct: 340 ----DSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRA 392
Query: 457 LKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEG 516
++ + EL +P Y +I + + D AF+ + + K G T ++I
Sbjct: 393 STIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGA 452
Query: 517 LFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMR 569
+A S+ + +G+KL +++ + L+ + +L D MR
Sbjct: 453 CSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMR 505
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 145/335 (43%), Gaps = 36/335 (10%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMK 315
+P+I AF + +D LCK ++ A + K++ I+ ++ + + ++ G+C+V P +K
Sbjct: 303 RPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIK 362
Query: 316 LL--------------------------------EEMIQLGHRPDNFTYNTALDTYCKAG 343
L+ +E+ +LG PD Y T +D YC G
Sbjct: 363 LIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLG 422
Query: 344 MITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVT 403
+A F + G+ P+ T I+I ++ + + + M + G DV
Sbjct: 423 RTDKAFQYFGALLKSGN---PPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVV 479
Query: 404 TYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRM 463
TY +++ G ++++ ++ ++EM + G PD+ TYN + + +EA ++ +
Sbjct: 480 TYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISEL 539
Query: 464 IELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKT 523
I +PS + +I F + D AF W M D T ++ G +
Sbjct: 540 IRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRM 599
Query: 524 EEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDL 558
E+A L ++++ G+K +++ + +GD+
Sbjct: 600 EKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDI 634
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 125/281 (44%), Gaps = 7/281 (2%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWC-RVRSPTRGMKL 316
P+ + ++D C + A + + K N + T + ++ G C R S + +
Sbjct: 406 PDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESV 465
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
M G + D TYN + Y K + + +L + MR+ G SP TY I+I +
Sbjct: 466 FRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGI---SPDVATYNILIHS 522
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
+ ++E +++ +I G +P + D+I G G EA+ M + PD
Sbjct: 523 MVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPD 582
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQ 496
+VT + L C ++ E+A+ L+ ++++ P V YN LI + + D + A E
Sbjct: 583 VVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIG 642
Query: 497 EMEKRGCNLDTDTYCVMIEGLFN---CNKTEEACSLLEEVI 534
M +RG + T+ ++ GL N A LLEE+I
Sbjct: 643 LMVQRGMLPNESTHHALVLGLEGKRFVNSETHASMLLEEII 683
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 112/293 (38%), Gaps = 44/293 (15%)
Query: 277 EYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTAL 336
E+ E + + R + NA ++ + +C +G +LL M G RPD + +
Sbjct: 257 EFVEHMLSRGRHL---NAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFI 313
Query: 337 DTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISS 396
D CKAG + EA + FKL + IS
Sbjct: 314 DKLCKAGFLKEATSVL----------------------------------FKLKLFGISQ 339
Query: 397 GCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEA 456
D + +I+G C GK +EA K + + P+I Y+ FL +C A
Sbjct: 340 ----DSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRA 392
Query: 457 LKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEG 516
++ + EL +P Y +I + + D AF+ + + K G T ++I
Sbjct: 393 STIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGA 452
Query: 517 LFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMR 569
+A S+ + +G+KL +++ + L+ + +L D MR
Sbjct: 453 CSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMR 505
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 117/282 (41%), Gaps = 40/282 (14%)
Query: 256 TQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAE--TYNILVFGWCRVRSPTRG 313
+ P+ +N LL LCKC + +MR + + ++ IL+ C ++
Sbjct: 190 SPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREA 249
Query: 314 MKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIM 373
M L+ ++ G +PD F YNT + +C +EAV +++ M+ +G
Sbjct: 250 MYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVE------------ 297
Query: 374 IVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGY 433
PD TY +I G+ G+++EA +L+ M + GY
Sbjct: 298 --------------------------PDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGY 331
Query: 434 PPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFE 493
PD TY + +C +S AL L M C P+ TYN L+ + D E
Sbjct: 332 EPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGME 391
Query: 494 TWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVIN 535
++ M+ G L+++ Y ++ L K EA + + ++
Sbjct: 392 LYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVD 433
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 137/322 (42%), Gaps = 11/322 (3%)
Query: 254 VKTQPEI----NAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAE----TYNILVFGWC 305
+K+QP + F +LL C+ + +++ + ++N E T +I V C
Sbjct: 112 LKSQPNFRPGRSTFLILLSHACRAPDSSISN-VHRVLNLMVNNGLEPDQVTTDIAVRSLC 170
Query: 306 RVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSP 365
L++E+ + PD +TYN L CK + + + MR P
Sbjct: 171 ETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDV--KP 228
Query: 366 TAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFL 425
++ I+I + + + E L+ + ++G PD Y I++G C K EA
Sbjct: 229 DLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVY 288
Query: 426 EEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEM 485
++M +G PD +TYN + L + EEA M++ P TY L++
Sbjct: 289 KKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRK 348
Query: 486 DDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKF 545
+ GA +EME RGC + TY ++ GL ++ L E + + G+KL +
Sbjct: 349 GESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGY 408
Query: 546 DSFLIQLSDLGDLHAIHKLSDH 567
+ + L G + +++ D+
Sbjct: 409 ATLVRSLVKSGKVAEAYEVFDY 430
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 106/242 (43%), Gaps = 4/242 (1%)
Query: 238 KYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAET 296
K L V +F + R +P++ +F +L+D +C + A L K+ +
Sbjct: 208 KDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFL 267
Query: 297 YNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMR 356
YN ++ G+C + + + + ++M + G PD TYNT + KAG + EA + M
Sbjct: 268 YNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMV 327
Query: 357 TKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCG 416
G P TY ++ + + L+ M + GC P+ TY ++ G+C
Sbjct: 328 DAGY---EPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKAR 384
Query: 417 KIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYN 476
+D+ + E M + G + Y +R L + K EA +++ ++ + + Y+
Sbjct: 385 LMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYS 444
Query: 477 ML 478
L
Sbjct: 445 TL 446
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 4/200 (2%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMRK-IINTNAETYNILVFGWCRVRSPTRGMK 315
+P+ +N ++ C A G+YKKM++ + + TYN L+FG +
Sbjct: 262 KPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARM 321
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
L+ M+ G+ PD TY + ++ C+ G A+ L E M +G +P TY ++
Sbjct: 322 YLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGC---APNDCTYNTLLH 378
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
L + M++ +L M SSG + Y ++ + GK+ EAY+ + +
Sbjct: 379 GLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLS 438
Query: 436 DIVTYNCFLRVLCDNKKSEE 455
D Y+ L KK++E
Sbjct: 439 DASAYSTLETTLKWLKKAKE 458
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 123/284 (43%), Gaps = 5/284 (1%)
Query: 257 QPEINAFNLLLDALCKCCL--VEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGM 314
+P + +N ++DA K + + A+ + R + + T+N L+ R
Sbjct: 300 RPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAAR 359
Query: 315 KLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMI 374
L +EM D F+YNT LD CK G + A ++ M K P +Y+ +I
Sbjct: 360 NLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIM---PNVVSYSTVI 416
Query: 375 VTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYP 434
A+ R +E L G M G D +Y ++ G+ +EA L EM + G
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476
Query: 435 PDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFET 494
D+VTYN L K +E K++ M +P++ TY+ LI + + A E
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEI 536
Query: 495 WQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGI 538
++E + G D Y +I+ L A SL++E+ +GI
Sbjct: 537 FREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGI 580
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 141/316 (44%), Gaps = 11/316 (3%)
Query: 260 INAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGM-KLL 317
+ AF+ L+ A + L E A ++ M++ + N TYN ++ + + + K
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFF 327
Query: 318 EEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFM---RTKGSTISSPTAKTYAIMI 374
+EM + G +PD T+N+ L + G+ A +LF+ M R + S Y ++
Sbjct: 328 DEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFS------YNTLL 381
Query: 375 VTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYP 434
+ + +M+ F+++ M +P+V +Y +I+G G+ DEA EM G
Sbjct: 382 DAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIA 441
Query: 435 PDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFET 494
D V+YN L + +SEEAL + M + V TYN L+ + + D +
Sbjct: 442 LDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKV 501
Query: 495 WQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSD 554
+ EM++ + TY +I+G +EA + E + G++ + + + L
Sbjct: 502 FTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCK 561
Query: 555 LGDLHAIHKLSDHMRK 570
G + + L D M K
Sbjct: 562 NGLVGSAVSLIDEMTK 577
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 4/229 (1%)
Query: 255 KTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRG 313
+ + ++ ++N LLDA+CK ++ A + +M K I N +Y+ ++ G+ +
Sbjct: 369 RIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEA 428
Query: 314 MKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIM 373
+ L EM LG D +YNT L Y K G EA+D+ M + G TY +
Sbjct: 429 LNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGI---KKDVVTYNAL 485
Query: 374 IVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGY 433
+ + + +E K+ M LP++ TY +I+G G EA + E + G
Sbjct: 486 LGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGL 545
Query: 434 PPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMF 482
D+V Y+ + LC N A+ L M + P+V TYN +I F
Sbjct: 546 RADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAF 594
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 114/266 (42%), Gaps = 4/266 (1%)
Query: 253 RVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPT 311
R QP+ FN LL + L E A L+ +M + I + +YN L+ C+
Sbjct: 332 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMD 391
Query: 312 RGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYA 371
++L +M P+ +Y+T +D + KAG EA++LF MR G + +Y
Sbjct: 392 LAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDR---VSYN 448
Query: 372 IMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNK 431
++ + R EE ++ M S G DV TY ++ G GK DE K EM +
Sbjct: 449 TLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKRE 508
Query: 432 GYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGA 491
P+++TY+ + +EA++++ V Y+ LI + A
Sbjct: 509 HVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSA 568
Query: 492 FETWQEMEKRGCNLDTDTYCVMIEGL 517
EM K G + + TY +I+
Sbjct: 569 VSLIDEMTKEGISPNVVTYNSIIDAF 594
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/412 (23%), Positives = 166/412 (40%), Gaps = 51/412 (12%)
Query: 142 LDQLAIPLSTPLVTGVLHRLRYDEKIAFRFFTWA------GNQENYSHEPCAYNDMMDIL 195
L Q + L+ PL++ VL R K+A F+ W EN C M+ +L
Sbjct: 48 LHQFSSSLTNPLISRVLREFRSSPKLALEFYNWVLRSNTVAKSENRFEASCV---MIHLL 104
Query: 196 SSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEKYLTHVQKFAKKKRIRVK 255
++ I M + M + + P+ VL ++R Y
Sbjct: 105 VGSRRFDDALSI---MANLMSVEGEKLSPLHVLSGLIRSYQA----------------CG 145
Query: 256 TQPEINAFNLLLDALCKCCLVEY-AEGLYKKMRKIINTNAETYNILV-----FGWC--RV 307
+ P++ D+L + C A+G Y+ + + T AE + + V F C V
Sbjct: 146 SSPDV------FDSLVRACTQNGDAQGAYEVIEQ---TRAEGFCVSVHALNNFMGCLLNV 196
Query: 308 RSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTA 367
R K+ +EM LG+ + T+N + ++CK + EA+ +F M G P
Sbjct: 197 NEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVW---PNV 253
Query: 368 KTYAIMIVTLAQNDRMEECFKLMGYM-ISSGCL--PDVTTYKDIIEGVCLCGKIDEAYKF 424
++ +MI + M +L+G M + SG P+ TY +I G C G++D A +
Sbjct: 254 VSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERI 313
Query: 425 LEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFE 484
+M G + TY + S+EAL+L M + + YN ++ F
Sbjct: 314 RGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFM 373
Query: 485 MDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINK 536
D +GA ++M + +D T +++ GL +EA ++ K
Sbjct: 374 EGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEK 425
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 120/272 (44%), Gaps = 7/272 (2%)
Query: 250 KRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR----KIINTNAETYNILVFGWC 305
+ ++ P + +FN+++D CK + +A L KM ++ NA TYN ++ G+C
Sbjct: 243 RMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFC 302
Query: 306 RVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSP 365
+ ++ +M++ G + TY +D Y +AG EA+ L + M +KG +++
Sbjct: 303 KAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTV 362
Query: 366 TAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFL 425
Y ++ L +E ++ M S D T ++ G+C G + EA +F
Sbjct: 363 I---YNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQ 419
Query: 426 EEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEM 485
++ K DIV +N + +KK A ++ G M+ ++ LI + +
Sbjct: 420 RQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKE 479
Query: 486 DDPDGAFETWQEMEKRGCNLDTDTYCVMIEGL 517
+ A E + M K + Y ++ GL
Sbjct: 480 GKLERALEIYDGMIKMNKTSNLVIYNSIVNGL 511
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 106/240 (44%), Gaps = 8/240 (3%)
Query: 324 GHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRM 383
G PD +++ + + G A ++ E R +G +S + ++ + + DR
Sbjct: 145 GSSPD--VFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRF 202
Query: 384 EECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCF 443
+ +K M S G + +V T+ +I C K+ EA M G P++V++N
Sbjct: 203 WKVYKEMD---SLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMM 259
Query: 444 LRVLCDNKKSEEALKLYGRMIELR---CIPSVQTYNMLISMFFEMDDPDGAFETWQEMEK 500
+ C AL+L G+M + P+ TYN +I+ F + D A +M K
Sbjct: 260 IDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVK 319
Query: 501 RGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHA 560
G + + TY +++ ++EA L +E+ +KG+ + ++S + L GD+
Sbjct: 320 SGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEG 379
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 74/352 (21%), Positives = 128/352 (36%), Gaps = 72/352 (20%)
Query: 256 TQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGM 314
P +N +++ CK ++ AE + M K ++ N TY LV + R S +
Sbjct: 287 VSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEAL 346
Query: 315 KLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMI 374
+L +EM G + YN+ + G I A+ + M +K I T AI++
Sbjct: 347 RLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQ---AIVV 403
Query: 375 VTLAQNDRMEECF-----------------------------------KLMGYMISSGCL 399
L +N ++E +++G M+ G
Sbjct: 404 RGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLS 463
Query: 400 PDVTTYKDIIEGVCLCGKIDEAYKFLEEM----------------------GNKGYPP-- 435
D ++ +I+G GK++ A + + M G G
Sbjct: 464 LDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAV 523
Query: 436 -------DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQ--TYNMLISMFFEMD 486
DIVTYN L EEA + +M + SV T+N++I+ +
Sbjct: 524 VNAMEIKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFG 583
Query: 487 DPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGI 538
+ A E + M +RG D+ TY +I E+ L + +I +G+
Sbjct: 584 SYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGV 635
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/274 (19%), Positives = 114/274 (41%), Gaps = 31/274 (11%)
Query: 225 VEVLMTILRKYTEKYLTHVQKFAKKKRIR-----------VKTQPEINAFNLLLDALCKC 273
+E M++LR K + + +F + +R V+ Q +I+ L+ D +C
Sbjct: 377 IEGAMSVLRDMNSKNM-QIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHN 435
Query: 274 CLVEY---------AEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQL 323
L+ + A+ + M + ++ +A ++ L+ G+ + R +++ + MI++
Sbjct: 436 TLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKM 495
Query: 324 GHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRM 383
+ YN+ ++ K GM A + M K TY ++ + +
Sbjct: 496 NKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDIV-------TYNTLLNESLKTGNV 548
Query: 384 EECFKLMGYMISSGCLPDVT--TYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYN 441
EE ++ M V+ T+ +I +C G ++A + L+ M +G PD +TY
Sbjct: 549 EEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYG 608
Query: 442 CFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTY 475
+ ++ E+ ++L+ +I P Y
Sbjct: 609 TLITSFSKHRSQEKVVELHDYLILQGVTPHEHIY 642
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 183/430 (42%), Gaps = 23/430 (5%)
Query: 147 IPLSTPLVTGVLHRLRYDEKI-AFRFFTWAGNQENYSHEPCAYND--MMDILSSTKYKVK 203
I L+T V VL D + + RF+ W N +P D + +L + ++
Sbjct: 72 IGLNTRFVISVLQN--QDNPLHSLRFYLWVSN-----FDPVYAKDQSLKSVLGNALFRKG 124
Query: 204 QFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTE----KYLTHVQKFAKKKRIRVKTQPE 259
+ ++L + R + + E++ ++ + KY V FA+ + +K P
Sbjct: 125 PLLLSMELLKEI-RDSGYRISDELMCVLIGSWGRLGLAKYCNDV--FAQISFLGMK--PS 179
Query: 260 INAFNLLLDALCKCCLVEYAEGLYKKMRK-IINTNAETYNILVFGWCRVRSPTRGMKLLE 318
+N ++DAL K ++ A +++MR + TYNIL+ G C+ ++L++
Sbjct: 180 TRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVK 239
Query: 319 EMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLA 378
+M Q G+RP+ FTY +D + AG + EA+ E MR + + T +T+ I
Sbjct: 240 QMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCL 299
Query: 379 QNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIV 438
+ E L+G+M L V Y ++ + E +FL ++G +GY PD
Sbjct: 300 PPCKAFEV--LVGFMEKDSNLQRV-GYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSS 356
Query: 439 TYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEM 498
T+N + L E +++ + P Y +L+ ++M
Sbjct: 357 TFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQM 416
Query: 499 EKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDL 558
G +Y +I+ L + E A L E+ ++GI F++FL S GD+
Sbjct: 417 GVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDV 476
Query: 559 HAIHKLSDHM 568
+H + + +
Sbjct: 477 KKVHGVLEKL 486
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 120/281 (42%), Gaps = 4/281 (1%)
Query: 258 PEINAFNLLLDALCKCC-LVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKL 316
P+ + FN + L K LVE + + + Y +LV + + G +
Sbjct: 353 PDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRY 412
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
L++M G ++YN +D CKA I A M+ +G SP T+ +
Sbjct: 413 LKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGI---SPNLVTFNTFLSG 469
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
+ +++ ++ ++ G PDV T+ II +C +I +A+ +EM G P+
Sbjct: 470 YSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPN 529
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQ 496
+TYN +R C ++ ++KL+ +M E P + YN I F +M A E +
Sbjct: 530 EITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLK 589
Query: 497 EMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKG 537
M + G D TY +I+ L + EA + + G
Sbjct: 590 TMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHG 630
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 109/255 (42%), Gaps = 4/255 (1%)
Query: 256 TQPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGM 314
+P N + +L+ AL + K+M + ++ +YN ++ C+ R
Sbjct: 386 VKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAA 445
Query: 315 KLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMI 374
L EM G P+ T+NT L Y G + + + E + G P T++++I
Sbjct: 446 MFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGF---KPDVITFSLII 502
Query: 375 VTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYP 434
L + +++ F M+ G P+ TY +I C G D + K +M G
Sbjct: 503 NCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLS 562
Query: 435 PDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFET 494
PD+ YN ++ C +K ++A +L M+ + P TY+ LI E A E
Sbjct: 563 PDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREM 622
Query: 495 WQEMEKRGCNLDTDT 509
+ +E+ GC D+ T
Sbjct: 623 FSSIERHGCVPDSYT 637
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 105/220 (47%), Gaps = 4/220 (1%)
Query: 260 INAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMKLLE 318
+ ++N ++D LCK +E A +M+ + I+ N T+N + G+ + +LE
Sbjct: 425 VYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLE 484
Query: 319 EMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLA 378
+++ G +PD T++ ++ C+A I +A D F+ M G P TY I+I +
Sbjct: 485 KLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGI---EPNEITYNILIRSCC 541
Query: 379 QNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIV 438
+ KL M +G PD+ Y I+ C K+ +A + L+ M G PD
Sbjct: 542 STGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNF 601
Query: 439 TYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNML 478
TY+ ++ L ++ + EA +++ + C+P T ++
Sbjct: 602 TYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTKRLV 641
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 118/277 (42%), Gaps = 38/277 (13%)
Query: 315 KLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMI 374
+ L ++ + G+ PD+ T+N A+ K + E +F+ ++G P Y +++
Sbjct: 341 QFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGV---KPGFNGYLVLV 397
Query: 375 VTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKG-- 432
L R E + + M G L V +Y +I+ +C +I+ A FL EM ++G
Sbjct: 398 QALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGIS 457
Query: 433 ---------------------------------YPPDIVTYNCFLRVLCDNKKSEEALKL 459
+ PD++T++ + LC K+ ++A
Sbjct: 458 PNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDC 517
Query: 460 YGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFN 519
+ M+E P+ TYN+LI D D + + + +M++ G + D Y I+
Sbjct: 518 FKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCK 577
Query: 520 CNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLG 556
K ++A LL+ ++ G+K + + + LS+ G
Sbjct: 578 MRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESG 614
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 80/155 (51%), Gaps = 4/155 (2%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMK 315
+P++ F+L+++ LC+ ++ A +K+M + I N TYNIL+ C R +K
Sbjct: 492 KPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVK 551
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
L +M + G PD + YN + ++CK + +A +L + M G P TY+ +I
Sbjct: 552 LFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGL---KPDNFTYSTLIK 608
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIE 410
L+++ R E ++ + GC+PD T + + E
Sbjct: 609 ALSESGRESEAREMFSSIERHGCVPDSYTKRLVEE 643
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 121/285 (42%), Gaps = 6/285 (2%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMK 315
+P + + +L+D V+ A + MR + +N N T V G R P + +
Sbjct: 247 RPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFE 306
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY-AIMI 374
+L ++ Y+ L YC + + A + +F+R G P + T+ A M
Sbjct: 307 VLVGFMEKDSNLQRVGYDAVL--YCLSNN-SMAKETGQFLRKIGERGYIPDSSTFNAAMS 363
Query: 375 VTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYP 434
L +D +E C G+ +S G P Y +++ + + E ++L++MG G
Sbjct: 364 CLLKGHDLVETCRIFDGF-VSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLL 422
Query: 435 PDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFET 494
+ +YN + LC ++ E A M + P++ T+N +S + D
Sbjct: 423 SSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGV 482
Query: 495 WQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
+++ G D T+ ++I L + ++A +E++ GI+
Sbjct: 483 LEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIE 527
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 140/320 (43%), Gaps = 2/320 (0%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSP 310
+R P + +N L++A A + KKM + + T+NI++ + R
Sbjct: 205 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 264
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
++ + E M RPD T+N + K G ++A+DLF MR K + P T+
Sbjct: 265 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAE-CRPDVVTF 323
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGN 430
++ + +E C + M++ G P++ +Y ++ + G A L ++
Sbjct: 324 TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQ 383
Query: 431 KGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDG 490
G PD+V+Y C L +++ +A +++ M + R P+V TYN LI +
Sbjct: 384 NGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAE 443
Query: 491 AFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLI 550
A E +++ME+ G + + C ++ K ++L ++GI L ++S +
Sbjct: 444 AVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIG 503
Query: 551 QLSDLGDLHAIHKLSDHMRK 570
+ +L L MRK
Sbjct: 504 SYINAAELEKAIALYQSMRK 523
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 125/286 (43%), Gaps = 6/286 (2%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMK 315
+P+ ++ L++A + +A L M R I + TYN L+ + ++
Sbjct: 175 KPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALE 234
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
+ ++M G PD T+N L Y ++A+ FE M KG+ + P T+ I+I
Sbjct: 235 VCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELM--KGAKVR-PDTTTFNIIIY 291
Query: 376 TLAQNDRMEECFKLMGYMIS--SGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGY 433
L++ + + L M + C PDV T+ I+ + G+I+ E M +G
Sbjct: 292 CLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGL 351
Query: 434 PPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFE 493
P+IV+YN + + S AL + G + + IP V +Y L++ + P A E
Sbjct: 352 KPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKE 411
Query: 494 TWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
+ M K + TY +I+ + EA + ++ GIK
Sbjct: 412 VFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIK 457
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/372 (19%), Positives = 144/372 (38%), Gaps = 5/372 (1%)
Query: 201 KVKQFRIVCDMLDYMKRKNKSTVP-VEVLMTILRKYTEKYLTHVQKFAKKKRIRVKTQPE 259
K+ Q D+ + M+ K P V +I+ Y+ K + + + +P
Sbjct: 295 KLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPN 354
Query: 260 INAFNLLLDALCKCCLVEYAEGLYKKMRK-IINTNAETYNILVFGWCRVRSPTRGMKLLE 318
I ++N L+ A + A + +++ I + +Y L+ + R R P + ++
Sbjct: 355 IVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFL 414
Query: 319 EMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLA 378
M + +P+ TYN +D Y G + EAV++F M G P + ++ +
Sbjct: 415 MMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGI---KPNVVSVCTLLAACS 471
Query: 379 QNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIV 438
++ + ++ S G + Y I ++++A + M K D V
Sbjct: 472 RSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSV 531
Query: 439 TYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEM 498
T+ + C K EA+ M +L + + Y+ ++ + + A + +M
Sbjct: 532 TFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM 591
Query: 499 EKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDL 558
+ GC D Y M+ K +AC L E+ GI+ + + + G
Sbjct: 592 KMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQP 651
Query: 559 HAIHKLSDHMRK 570
+ L D MR+
Sbjct: 652 SNVFVLMDLMRE 663
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 125/302 (41%), Gaps = 19/302 (6%)
Query: 241 THVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNA--ETYN 298
+ V +FA+K F +L+ L + +E ++K M+ N A + YN
Sbjct: 100 SWVGRFARKN------------FPVLIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYN 147
Query: 299 ILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTK 358
+++ R + L EM + +PD TY+ ++ + +AG A++L + M
Sbjct: 148 MMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRA 207
Query: 359 GSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKI 418
+P+ TY +I + E ++ M +G PD+ T+ ++ +
Sbjct: 208 A---IAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 264
Query: 419 DEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELR--CIPSVQTYN 476
+A + E M PD T+N + L +S +AL L+ M E R C P V T+
Sbjct: 265 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFT 324
Query: 477 MLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINK 536
++ ++ + + ++ M G + +Y ++ + A S+L ++
Sbjct: 325 SIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN 384
Query: 537 GI 538
GI
Sbjct: 385 GI 386
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/356 (20%), Positives = 143/356 (40%), Gaps = 15/356 (4%)
Query: 188 YNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEKYLTHVQKFA 247
YN ++D S + + I M + N +V +L R + + V A
Sbjct: 428 YNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSV-CTLLAACSRSKKKVNVDTVLSAA 486
Query: 248 KKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCR 306
+ + I + T A+N + + +E A LY+ MRK + ++ T+ IL+ G CR
Sbjct: 487 QSRGINLNTA----AYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCR 542
Query: 307 VRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPT 366
+ + L+EM L Y++ L Y K G +TEA +F M+ G P
Sbjct: 543 MSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGC---EPD 599
Query: 367 AKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLE 426
Y M+ +++ + +L M ++G PD ++ G+ + ++
Sbjct: 600 VIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMD 659
Query: 427 EMGNKGYPPDIVTYNCFLRVL--CDN-KKSEEALKLYGRMIELRCIPSVQTYNMLISMFF 483
M K P T F + C+ ++ + A+ L M S+ N ++ +F
Sbjct: 660 LMREKEIP---FTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFG 716
Query: 484 EMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
+ + + + ++ G ++ TY +++E L + +LE + GI+
Sbjct: 717 KSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQ 772
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 140/320 (43%), Gaps = 2/320 (0%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSP 310
+R P + +N L++A A + KKM + + T+NI++ + R
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 132
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
++ + E M RPD T+N + K G ++A+DLF MR K + P T+
Sbjct: 133 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAE-CRPDVVTF 191
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGN 430
++ + +E C + M++ G P++ +Y ++ + G A L ++
Sbjct: 192 TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQ 251
Query: 431 KGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDG 490
G PD+V+Y C L +++ +A +++ M + R P+V TYN LI +
Sbjct: 252 NGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAE 311
Query: 491 AFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLI 550
A E +++ME+ G + + C ++ K ++L ++GI L ++S +
Sbjct: 312 AVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIG 371
Query: 551 QLSDLGDLHAIHKLSDHMRK 570
+ +L L MRK
Sbjct: 372 SYINAAELEKAIALYQSMRK 391
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 125/286 (43%), Gaps = 6/286 (2%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMK 315
+P+ ++ L++A + +A L M R I + TYN L+ + ++
Sbjct: 43 KPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALE 102
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
+ ++M G PD T+N L Y ++A+ FE M KG+ + P T+ I+I
Sbjct: 103 VCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELM--KGAKVR-PDTTTFNIIIY 159
Query: 376 TLAQNDRMEECFKLMGYMIS--SGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGY 433
L++ + + L M + C PDV T+ I+ + G+I+ E M +G
Sbjct: 160 CLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGL 219
Query: 434 PPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFE 493
P+IV+YN + + S AL + G + + IP V +Y L++ + P A E
Sbjct: 220 KPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKE 279
Query: 494 TWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
+ M K + TY +I+ + EA + ++ GIK
Sbjct: 280 VFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIK 325
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/372 (19%), Positives = 144/372 (38%), Gaps = 5/372 (1%)
Query: 201 KVKQFRIVCDMLDYMKRKNKSTVP-VEVLMTILRKYTEKYLTHVQKFAKKKRIRVKTQPE 259
K+ Q D+ + M+ K P V +I+ Y+ K + + + +P
Sbjct: 163 KLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPN 222
Query: 260 INAFNLLLDALCKCCLVEYAEGLYKKMRK-IINTNAETYNILVFGWCRVRSPTRGMKLLE 318
I ++N L+ A + A + +++ I + +Y L+ + R R P + ++
Sbjct: 223 IVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFL 282
Query: 319 EMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLA 378
M + +P+ TYN +D Y G + EAV++F M G P + ++ +
Sbjct: 283 MMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGI---KPNVVSVCTLLAACS 339
Query: 379 QNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIV 438
++ + ++ S G + Y I ++++A + M K D V
Sbjct: 340 RSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSV 399
Query: 439 TYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEM 498
T+ + C K EA+ M +L + + Y+ ++ + + A + +M
Sbjct: 400 TFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM 459
Query: 499 EKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDL 558
+ GC D Y M+ K +AC L E+ GI+ + + + G
Sbjct: 460 KMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQP 519
Query: 559 HAIHKLSDHMRK 570
+ L D MR+
Sbjct: 520 SNVFVLMDLMRE 531
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 103/246 (41%), Gaps = 5/246 (2%)
Query: 295 ETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEF 354
+ YN+++ R + L EM + +PD TY+ ++ + +AG A++L +
Sbjct: 12 DIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDD 71
Query: 355 MRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCL 414
M +P+ TY +I + E ++ M +G PD+ T+ ++
Sbjct: 72 MLRAA---IAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKS 128
Query: 415 CGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELR--CIPSV 472
+ +A + E M PD T+N + L +S +AL L+ M E R C P V
Sbjct: 129 GRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDV 188
Query: 473 QTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEE 532
T+ ++ ++ + + ++ M G + +Y ++ + A S+L +
Sbjct: 189 VTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGD 248
Query: 533 VINKGI 538
+ GI
Sbjct: 249 IKQNGI 254
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/356 (20%), Positives = 143/356 (40%), Gaps = 15/356 (4%)
Query: 188 YNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEKYLTHVQKFA 247
YN ++D S + + I M + N +V +L R + + V A
Sbjct: 296 YNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSV-CTLLAACSRSKKKVNVDTVLSAA 354
Query: 248 KKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCR 306
+ + I + T A+N + + +E A LY+ MRK + ++ T+ IL+ G CR
Sbjct: 355 QSRGINLNTA----AYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCR 410
Query: 307 VRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPT 366
+ + L+EM L Y++ L Y K G +TEA +F M+ G P
Sbjct: 411 MSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGC---EPD 467
Query: 367 AKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLE 426
Y M+ +++ + +L M ++G PD ++ G+ + ++
Sbjct: 468 VIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMD 527
Query: 427 EMGNKGYPPDIVTYNCFLRVL--CDN-KKSEEALKLYGRMIELRCIPSVQTYNMLISMFF 483
M K P T F + C+ ++ + A+ L M S+ N ++ +F
Sbjct: 528 LMREKEIP---FTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFG 584
Query: 484 EMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
+ + + + ++ G ++ TY +++E L + +LE + GI+
Sbjct: 585 KSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQ 640
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 108/461 (23%), Positives = 187/461 (40%), Gaps = 36/461 (7%)
Query: 121 VDKVCNTMMDNLHG--FNNLEKALDQLAIPLSTPLVTGVLHRLRYDEKIAFRFFTWA--- 175
VD +C+T+ + + NL + L L P ++ VL R + D A FF W
Sbjct: 47 VDVICSTLNHSDYSVLLPNLRDEVKSLIPHLGYPEISRVLLRFQSDASRAITFFKWVKFD 106
Query: 176 -GNQENYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRK 234
G + N + Y ++ IL S+K + +C++++ +K + V+V ++
Sbjct: 107 LGKRPNVGN----YCLLLHILVSSKKFPLAMQFLCELIELTSKKEE----VDVFRVLVSA 158
Query: 235 YTE-KYLTHVQKFAKKKRIRVKTQPE-INAFNLLLDALCKCCLV---------------E 277
E + V K +++ E F +LD+ +V E
Sbjct: 159 TDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLME 218
Query: 278 YAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTAL 336
+Y M ++ I+ N T+NIL +C + LE+M + G PD TYNT +
Sbjct: 219 DCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLV 278
Query: 337 DTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISS 396
+YC+ G + EA L++ M + P TY +I L ++ R+ E + M+
Sbjct: 279 SSYCRRGRLKEAFYLYKIMYRRRVV---PDLVTYTSLIKGLCKDGRVREAHQTFHRMVDR 335
Query: 397 GCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEA 456
G PD +Y +I C G + ++ K L EM PD T + + A
Sbjct: 336 GIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSA 395
Query: 457 LKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEM-EKRGCNLDTDTYCVMIE 515
+ + L+ + + LI + P A + E+ G +TY +IE
Sbjct: 396 VNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIE 455
Query: 516 GLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLG 556
L C+ EEA L ++ N+ L K + + + L +G
Sbjct: 456 SLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIG 496
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 140/348 (40%), Gaps = 42/348 (12%)
Query: 193 DILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEKYLTHVQKFAKKKRI 252
+IL++ FR V D L+ M+ + V T++ Y + + K
Sbjct: 240 NILTNVFCNDSNFREVDDFLEKMEEEGFEPDLV-TYNTLVSSYCRRGRLKEAFYLYKIMY 298
Query: 253 RVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPT 311
R + P++ + L+ LCK V A + +M + I + +YN L++ +C+
Sbjct: 299 RRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQ 358
Query: 312 RGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVD-LFEFMRTK------------ 358
+ KLL EM+ PD FT ++ + + G + AV+ + E R K
Sbjct: 359 QSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLI 418
Query: 359 ------GSTISS--------------PTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGC 398
G ++ +TY +I +L++ D +EE L G + +
Sbjct: 419 VSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQ 478
Query: 399 LPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLC---DNKKSEE 455
+ D TY+ +I +C G+ EA + EM + PD + C D K+E
Sbjct: 479 VLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAER 538
Query: 456 ALKLYGRMIELRCIPSVQTYNMLISMFFEMD-DPDGAFETWQEMEKRG 502
L L+ +E R I ++YN L+ E A E + M++ G
Sbjct: 539 LLSLFA--MEFR-IFDPESYNSLVKAVCETGCGYKKALELQERMQRLG 583
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 79/186 (42%)
Query: 383 MEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNC 442
+EE F++ ++ SG V T ++ G+ +++ ++ M G P+ T+N
Sbjct: 182 VEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNI 241
Query: 443 FLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRG 502
V C++ E +M E P + TYN L+S + AF ++ M +R
Sbjct: 242 LTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRR 301
Query: 503 CNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIH 562
D TY +I+GL + EA ++++GIK +++ + G +
Sbjct: 302 VVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSK 361
Query: 563 KLSDHM 568
KL M
Sbjct: 362 KLLHEM 367
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 129/297 (43%), Gaps = 32/297 (10%)
Query: 260 INAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLEE 319
+ N ++ LCK LVE A+ ++ K+++ I + TY ++ G+C V KL
Sbjct: 181 VETMNRGVETLCKEKLVEEAKFVFIKLKEFIKPDEITYRTMIQGFCDVGDLIEAAKLWNL 240
Query: 320 MIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQ 379
M+ G D ++T K EA +F M +K Y +MI L +
Sbjct: 241 MMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRG--GDLDGGFYRVMIDWLCK 298
Query: 380 NDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVT 439
N R++ K+ M G D T+ +I G+ + ++ EAY +E + N PDI
Sbjct: 299 NGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYGLVEGVEN----PDISI 354
Query: 440 YNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEME 499
Y+ ++ L K++ EA +++ +MI+ C P + TY ML+ +
Sbjct: 355 YHGLIKGLVKIKRASEATEVFRKMIQRGCEPIMHTYLMLLQ---------------GHLG 399
Query: 500 KRG-------CNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFL 549
+RG N DT + + G+ K E +E + +G+++P + FL
Sbjct: 400 RRGRKGPDPLVNFDT----IFVGGMIKAGKRLETTKYIERTLKRGLEVPRFDYSKFL 452
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 103/252 (40%), Gaps = 37/252 (14%)
Query: 325 HRPDNFTYNTALDTYCKAGMI-TEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRM 383
H PD FT+ + A + + +DLF + + KT+ I++ TLA +
Sbjct: 104 HHPD-FTHTSTTSNKMLAIIGNSRNMDLFWELAQEIGKRGLVNDKTFRIVLKTLASAREL 162
Query: 384 EEC---FKLM---GYMISSGCL----------------------------PDVTTYKDII 409
++C F LM GY+ + + PD TY+ +I
Sbjct: 163 KKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKLKEFIKPDEITYRTMI 222
Query: 410 EGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCI 469
+G C G + EA K M ++G+ DI + L + +EA K++ M+ R
Sbjct: 223 QGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGG 282
Query: 470 P-SVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACS 528
Y ++I + D A + + EM +RG +D T+ +I GL + EA
Sbjct: 283 DLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYG 342
Query: 529 LLEEVINKGIKL 540
L+E V N I +
Sbjct: 343 LVEGVENPDISI 354
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 137/296 (46%), Gaps = 14/296 (4%)
Query: 240 LTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRK-IINTNAETYN 298
L KF ++ R R ++ A+N +L A C+ E A L K+M K I+ T+N
Sbjct: 232 LDFATKFFRRMRER-----DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWN 286
Query: 299 ILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTK 358
IL+ G+ ++ M L+++M G D FT+ + GM +A+D+F M
Sbjct: 287 ILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLA 346
Query: 359 GSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKI 418
G P A T + + + + ++ + G + DV +++ CGK+
Sbjct: 347 GVV---PNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKL 403
Query: 419 DEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNML 478
++A K + + NK D+ T+N + C +A +L+ RM + P++ T+N +
Sbjct: 404 EDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTM 459
Query: 479 ISMFFEMDDPDGAFETWQEMEKRG-CNLDTDTYCVMIEGLFNCNKTEEACSLLEEV 533
IS + + D A + +Q MEK G +T T+ ++I G K +EA L ++
Sbjct: 460 ISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKM 515
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 106/259 (40%), Gaps = 46/259 (17%)
Query: 315 KLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMI 374
++L L PD F L Y K G I +A +F+ MR + T++ MI
Sbjct: 101 RILHARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRER-------NLFTWSAMI 153
Query: 375 VTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGV---------------------- 412
++ +R E KL M+ G LPD + I++G
Sbjct: 154 GAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMS 213
Query: 413 -CL------------CGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKL 459
CL CG++D A KF M + D++ +N L C N K EEA++L
Sbjct: 214 SCLRVSNSILAVYAKCGELDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVEL 269
Query: 460 YGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFN 519
M + P + T+N+LI + ++ D A + Q+ME G D T+ MI GL +
Sbjct: 270 VKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIH 329
Query: 520 CNKTEEACSLLEEVINKGI 538
+A + ++ G+
Sbjct: 330 NGMRYQALDMFRKMFLAGV 348
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 115/275 (41%), Gaps = 12/275 (4%)
Query: 264 NLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQL 323
N +L KC +++A +++MR+ + +N ++ +C+ ++L++EM +
Sbjct: 220 NSILAVYAKCGELDFATKFFRRMRE---RDVIAWNSVLLAYCQNGKHEEAVELVKEMEKE 276
Query: 324 GHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRM 383
G P T+N + Y + G A+DL + M T G T T+ MI L N
Sbjct: 277 GISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGIT---ADVFTWTAMISGLIHNGMR 333
Query: 384 EECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNK-GYPPDIVTYNC 442
+ + M +G +P+ T + C C K+ + + K G+ D++ N
Sbjct: 334 YQALDMFRKMFLAGVVPNAVTIMSAVS-ACSCLKVINQGSEVHSIAVKMGFIDDVLVGNS 392
Query: 443 FLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRG 502
+ + K E+A K++ + V T+N +I+ + + A+E + M+
Sbjct: 393 LVDMYSKCGKLEDARKVFDSVKN----KDVYTWNSMITGYCQAGYCGKAYELFTRMQDAN 448
Query: 503 CNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKG 537
+ T+ MI G EA L + + G
Sbjct: 449 LRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDG 483
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/323 (20%), Positives = 119/323 (36%), Gaps = 45/323 (13%)
Query: 251 RIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSP 310
R + T+P++ LL KC + A ++ MR+ N T++ ++ + R
Sbjct: 106 RFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRE---RNLFTWSAMIGAYSRENRW 162
Query: 311 TRGMKLLEEMIQLGHRPDNFTY-----------------------------------NTA 335
KL M++ G PD+F + N+
Sbjct: 163 REVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSI 222
Query: 336 LDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMIS 395
L Y K G + A F MR + + +++ QN + EE +L+ M
Sbjct: 223 LAVYAKCGELDFATKFFRRMRER-------DVIAWNSVLLAYCQNGKHEEAVELVKEMEK 275
Query: 396 SGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEE 455
G P + T+ +I G GK D A +++M G D+ T+ + L N +
Sbjct: 276 EGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQ 335
Query: 456 ALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIE 515
AL ++ +M +P+ T +S + + E K G D +++
Sbjct: 336 ALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVD 395
Query: 516 GLFNCNKTEEACSLLEEVINKGI 538
C K E+A + + V NK +
Sbjct: 396 MYSKCGKLEDARKVFDSVKNKDV 418
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 134/332 (40%), Gaps = 41/332 (12%)
Query: 264 NLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQL 323
N L+D KC +E A ++ ++ N + T+N ++ G+C+ + +L M
Sbjct: 391 NSLVDMYSKCGKLEDARKVFDSVK---NKDVYTWNSMITGYCQAGYCGKAYELFTRMQDA 447
Query: 324 GHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRM 383
RP+ T+NT + Y K G EA+DLF+ M G + TA T+ ++I QN +
Sbjct: 448 NLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGK-VQRNTA-TWNLIIAGYIQNGKK 505
Query: 384 EECFKLMGYMISSGCLPDVTTYKDI---------------IEGVCLCGKIDEAYKFLEEM 428
+E +L M S +P+ T + I G L +D + +
Sbjct: 506 DEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNAL 565
Query: 429 -------GNKGYP---------PDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSV 472
G+ Y DI+T+N + + AL L+ +M P+
Sbjct: 566 TDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNR 625
Query: 473 QTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFN-CNKTEEACSLLE 531
T + +I M + D + + + + +C + L+ N+ EEA ++
Sbjct: 626 GTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQ 685
Query: 532 EVINKGIKLPYKKFDSFLIQLSDLGDLH-AIH 562
E+ I+ ++SFL GD+ AIH
Sbjct: 686 EM---NIQSETPIWESFLTGCRIHGDIDMAIH 714
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 132/313 (42%), Gaps = 40/313 (12%)
Query: 296 TYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFM 355
TY LV R + + L+ ++ + G +PD +N ++ ++G + +A+ +FE M
Sbjct: 356 TYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKM 415
Query: 356 RTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCL-PDVTTYKDIIEGVCL 414
+ G PTA T+ +I + ++EE +L+ M+ L P+ T +++ C
Sbjct: 416 KESGC---KPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCN 472
Query: 415 CGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVL--------------------------- 447
KI+EA+ + +M + G PD+VT+N +
Sbjct: 473 QRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVR 532
Query: 448 ---------CDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEM 498
C+ K EEAL+ + RM EL P++ +N LI F ++D DG E M
Sbjct: 533 TCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLM 592
Query: 499 EKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDL 558
E+ G D T+ ++ + + + +++ GI F + G+
Sbjct: 593 EEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEP 652
Query: 559 HAIHKLSDHMRKF 571
++ + MRKF
Sbjct: 653 EKAEQILNQMRKF 665
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 118/277 (42%), Gaps = 14/277 (5%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMRK--IINTNAETYNILVFGWCRVRSPTRGM 314
+P + FN L+ K +E + L M + ++ N T NILV WC R
Sbjct: 421 KPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAW 480
Query: 315 KLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLF--EFMRTKGSTISSPTAKTYAI 372
++ +M G +PD T+NT Y + G A D+ + K P +T
Sbjct: 481 NIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNK----VKPNVRTCGT 536
Query: 373 MIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKG 432
++ + +MEE + M G P++ + +I+G +D + ++ M G
Sbjct: 537 IVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFG 596
Query: 433 YPPDIVTYNCFLRV---LCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPD 489
PD+VT++ + + D K+ EE +Y M+E P + +++L + +P+
Sbjct: 597 VKPDVVTFSTLMNAWSSVGDMKRCEE---IYTDMLEGGIDPDIHAFSILAKGYARAGEPE 653
Query: 490 GAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEA 526
A + +M K G + Y +I G + + ++A
Sbjct: 654 KAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKA 690
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 111/252 (44%), Gaps = 12/252 (4%)
Query: 256 TQPEINAFNLLLDALCKCCLVEYAEGLY--KKMRKIINTNAETYNILVFGWCRVRSPTRG 313
+P++ FN L A + AE + + + + N T +V G+C
Sbjct: 491 VKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEA 550
Query: 314 MKLLEEMIQLGHRPDNFTYNTALDTYCKAG---MITEAVDLFEFMRTKGSTISSPTAKTY 370
++ M +LG P+ F +N+ + + + E VDL E K P T+
Sbjct: 551 LRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVK------PDVVTF 604
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGN 430
+ ++ + M+ C ++ M+ G PD+ + + +G G+ ++A + L +M
Sbjct: 605 STLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRK 664
Query: 431 KGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCI-PSVQTYNMLISMFFEMDDPD 489
G P++V Y + C + ++A+++Y +M + + P++ TY LI F E P
Sbjct: 665 FGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPW 724
Query: 490 GAFETWQEMEKR 501
A E ++ME +
Sbjct: 725 KAEELLKDMEGK 736
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 134/293 (45%), Gaps = 20/293 (6%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMK 315
+P+ FN +++A + ++ A +++KM++ A T+N L+ G+ ++ +
Sbjct: 386 KPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSR 445
Query: 316 LLE-----EMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPT---- 366
LL+ EM+Q P++ T N + +C I EA ++ M++ G T
Sbjct: 446 LLDMMLRDEMLQ----PNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTL 501
Query: 367 AKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLE 426
AK YA + T D ++ M+ + P+V T I+ G C GK++EA +F
Sbjct: 502 AKAYARIGSTCTAEDM------IIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFY 555
Query: 427 EMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMD 486
M G P++ +N ++ + + ++ M E P V T++ L++ + +
Sbjct: 556 RMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVG 615
Query: 487 DPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
D E + +M + G + D + ++ +G + E+A +L ++ G++
Sbjct: 616 DMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVR 668
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 70/151 (46%)
Query: 401 DVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLY 460
DV + ++ G+ G+ EA+ + +G+ P ++TY + L K L L
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 461 GRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNC 520
++ + P +N +I+ E + D A + +++M++ GC T+ +I+G
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 521 NKTEEACSLLEEVINKGIKLPYKKFDSFLIQ 551
K EE+ LL+ ++ + P + + L+Q
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQ 468
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/181 (18%), Positives = 79/181 (43%), Gaps = 1/181 (0%)
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
L + R +E + +I G P + TY ++ + + ++ G PD
Sbjct: 329 LIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPD 388
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQ 496
+ +N + ++ ++A+K++ +M E C P+ T+N LI + ++ + +
Sbjct: 389 TILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLD 448
Query: 497 EMEKRGCNLDTDTYC-VMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDL 555
M + D C ++++ N K EEA +++ ++ + G+K F++ + +
Sbjct: 449 MMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARI 508
Query: 556 G 556
G
Sbjct: 509 G 509
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 70/169 (41%), Gaps = 4/169 (2%)
Query: 343 GMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDV 402
G EA +F + +G P+ TY ++ L + L+ + +G PD
Sbjct: 333 GRPQEAHSIFNTLIEEGH---KPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDT 389
Query: 403 TTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGR 462
+ II G +D+A K E+M G P T+N ++ K EE+ +L
Sbjct: 390 ILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDM 449
Query: 463 MIELRCI-PSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTY 510
M+ + P+ +T N+L+ + + A+ +M+ G D T+
Sbjct: 450 MLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTF 498
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 123/259 (47%), Gaps = 7/259 (2%)
Query: 259 EINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNIL--VFGWCRVRSPTRGMK 315
++ A+ +L A + E A L+++M+++ + TYN++ VFG RS + +
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMG-RSWRKILG 267
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
+L+EM G + D FT +T L + G++ EA + F +++ G P TY ++
Sbjct: 268 VLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGY---EPGTVTYNALLQ 324
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
+ E ++ M + C D TY +++ G EA +E M KG P
Sbjct: 325 VFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMP 384
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
+ +TY + K +EALKL+ M E C+P+ TYN ++S+ + + +
Sbjct: 385 NAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKML 444
Query: 496 QEMEKRGCNLDTDTYCVMI 514
+M+ GC+ + T+ M+
Sbjct: 445 CDMKSNGCSPNRATWNTML 463
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 170/408 (41%), Gaps = 49/408 (12%)
Query: 204 QFRIVCDMLDYMKRKNKSTVPVEVLMTILRKY--TEKYLTHVQKFAKKKRIRVKTQPEIN 261
Q+ + +LD + + + + V TIL Y T KY + F + K + P +
Sbjct: 190 QYSVAAKLLDKIPLQ-EYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEM--GPSPTLV 246
Query: 262 AFNLLLDALCK--------------------------CCLVEYA---EGLYKKMRKII-- 290
+N++LD K C V A EGL ++ ++
Sbjct: 247 TYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAE 306
Query: 291 ------NTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGM 344
TYN L+ + + T + +L+EM + D+ TYN + Y +AG
Sbjct: 307 LKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGF 366
Query: 345 ITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTT 404
EA + E M KG P A TY +I + + +E KL M +GC+P+ T
Sbjct: 367 SKEAAGVIEMMTKKGVM---PNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCT 423
Query: 405 YKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEAL-KLYGRM 463
Y ++ + + +E K L +M + G P+ T+N L LC NK ++ + +++ M
Sbjct: 424 YNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML-ALCGNKGMDKFVNRVFREM 482
Query: 464 IELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKT 523
P T+N LIS + A + + EM + G N TY ++ L
Sbjct: 483 KSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDW 542
Query: 524 EEACSLLEEVINKGIKLPYKKFDSFLIQ-LSDLGDLHAIHKLSDHMRK 570
+++ ++ +KG K P + S ++Q + G+ I ++ + +++
Sbjct: 543 RSGENVISDMKSKGFK-PTETSYSLMLQCYAKGGNYLGIERIENRIKE 589
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/387 (21%), Positives = 153/387 (39%), Gaps = 50/387 (12%)
Query: 186 CAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEKYLTHVQK 245
C YN ++ +L + +++CDM N++T +L K +K++ V +
Sbjct: 422 CTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNT-MLALCGNKGMDKFVNRVFR 480
Query: 246 FAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGW 304
K +P+ + FN L+ A +C A +Y +M R N TYN L+
Sbjct: 481 EMKS----CGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNAL 536
Query: 305 CRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAG--------------------- 343
R G ++ +M G +P +Y+ L Y K G
Sbjct: 537 ARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSW 596
Query: 344 MITEAVDLFEF--MRTKGSTIS---------SPTAKTYAIMIVTLAQNDRMEECFKLMGY 392
M+ + L F GS + P + M+ +N+ ++ ++
Sbjct: 597 MLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILES 656
Query: 393 MISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKK 452
+ G PD+ TY +++ G+ +A + L+ + PD+V+YN ++ C
Sbjct: 657 IREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGL 716
Query: 453 SEEALKLYGRMIELRCIPSVQTYNMLIS------MFFEMDDPDGAFETWQEMEKRGCNLD 506
+EA+++ M E P + TYN +S MF E++D + M K C +
Sbjct: 717 MQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIED------VIECMAKNDCRPN 770
Query: 507 TDTYCVMIEGLFNCNKTEEACSLLEEV 533
T+ ++++G K EA + ++
Sbjct: 771 ELTFKMVVDGYCRAGKYSEAMDFVSKI 797
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 132/315 (41%), Gaps = 6/315 (1%)
Query: 258 PEINAFNLLLDALC-KCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMK 315
P +N +L ALC + ++ ++++M+ + +T+N L+ + R S K
Sbjct: 454 PNRATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASK 512
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
+ EM + G TYN L+ + G ++ M++KG PT +Y++M+
Sbjct: 513 MYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGF---KPTETSYSLMLQ 569
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
A+ ++ + P + ++ C + + + GY P
Sbjct: 570 CYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKP 629
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
D+V +N L + N ++A + + E P + TYN L+ M+ + A E
Sbjct: 630 DMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEIL 689
Query: 496 QEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDL 555
+ +EK D +Y +I+G +EA +L E+ +GI+ +++F+ + +
Sbjct: 690 KTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAM 749
Query: 556 GDLHAIHKLSDHMRK 570
G I + + M K
Sbjct: 750 GMFAEIEDVIECMAK 764
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 113/248 (45%), Gaps = 8/248 (3%)
Query: 286 MRKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMI 345
+ K +N + +Y+IL+ G + + + LL +MI+ G P+ TY + CK G +
Sbjct: 269 VEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKL 328
Query: 346 TEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTY 405
EA LF + + G + Y +I + + + F ++G M G P + TY
Sbjct: 329 EEAFVLFNRILSVGIEVDEFL---YVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTY 385
Query: 406 KDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIE 465
+I G+C+ G++ EA + +KG D++TY+ L + + L++ R +E
Sbjct: 386 NTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLE 440
Query: 466 LRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEE 525
+ + N+L+ F M A ++ M + DT TY MI+G + EE
Sbjct: 441 AKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEE 500
Query: 526 ACSLLEEV 533
A + E+
Sbjct: 501 ALEMFNEL 508
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 123/259 (47%), Gaps = 14/259 (5%)
Query: 328 DNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECF 387
D Y ++ CK G + +A++L F +++G T+++ T Y +I L Q + E
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTIT---YNSLINGLCQQGCLVEAL 710
Query: 388 KLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVL 447
+L + + G +P TY +I+ +C G +A K L+ M +KG P+I+ YN +
Sbjct: 711 RLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGY 770
Query: 448 CDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDT 507
C ++E+A+++ R + R P T + +I + + D + A + E + + + D
Sbjct: 771 CKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADF 830
Query: 508 DTYCVMIEGLFNCNKTEEACSLLEE-VINKGIKLPYKKFDS----------FLIQLSDLG 556
+ +I+G + EEA LL E ++++ + + D+ FL++L + G
Sbjct: 831 FGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLVELCEQG 890
Query: 557 DLHAIHKLSDHMRKFYNPA 575
+ K+ D + P+
Sbjct: 891 RVPQAIKILDEISSTIYPS 909
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 125/305 (40%), Gaps = 19/305 (6%)
Query: 259 EINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKLL 317
++ ++++L+D L K VE A GL KM ++ + N TY ++ G C++ L
Sbjct: 276 DVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLF 335
Query: 318 EEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTL 377
++ +G D F Y T +D C+ G + A + M +G P+ TY +I L
Sbjct: 336 NRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGI---QPSILTYNTVINGL 392
Query: 378 AQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDI 437
R+ E + +S G + DV TY +++ ID + P D+
Sbjct: 393 CMAGRVSEADE-----VSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDL 447
Query: 438 VTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQE 497
V N L+ EA LY M E+ P TY +I + + + A E + E
Sbjct: 448 VMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNE 507
Query: 498 MEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGD 557
+ K + Y +I+ L + A +L E+ KG+ L +
Sbjct: 508 LRKSSVSAAV-CYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTL--------- 557
Query: 558 LHAIH 562
LH+IH
Sbjct: 558 LHSIH 562
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 4/240 (1%)
Query: 300 LVFGWCRVRSPTRGMKLLEEMIQLGHR-PDNFTYNTALDTYCKAGMITEAVDLFEFMRTK 358
++ G+C++ P + E + G P+ TY T + C+ G + E DL + +
Sbjct: 177 VISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDE 236
Query: 359 GSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKI 418
G Y+ I + + + M+ G DV +Y +I+G+ G +
Sbjct: 237 GFEFDCVF---YSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNV 293
Query: 419 DEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNML 478
+EA L +M +G P+++TY +R LC K EEA L+ R++ + Y L
Sbjct: 294 EEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTL 353
Query: 479 ISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGI 538
I + + AF +ME+RG TY +I GL + EA + + V+ I
Sbjct: 354 IDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGDVI 413
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 2/212 (0%)
Query: 328 DNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECF 387
DNF + + +CK G A+ FE G + P TY ++ L Q +++E
Sbjct: 170 DNFVCSAVISGFCKIGKPELALGFFESAVDSGVLV--PNLVTYTTLVSALCQLGKVDEVR 227
Query: 388 KLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVL 447
L+ + G D Y + I G G + +A EM KG D+V+Y+ + L
Sbjct: 228 DLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGL 287
Query: 448 CDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDT 507
EEAL L G+MI+ P++ TY +I +M + AF + + G +D
Sbjct: 288 SKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDE 347
Query: 508 DTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
Y +I+G+ A S+L ++ +GI+
Sbjct: 348 FLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQ 379
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 141/372 (37%), Gaps = 71/372 (19%)
Query: 236 TEKYLTHVQKFAKKKRI----------RVKTQPEINAFNLLLDALCKCCLVEYA------ 279
T Y T ++ + K +I R + +N ++DALCK +++ A
Sbjct: 482 TATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAVCYNRIIDALCKKGMLDTATEVLIE 541
Query: 280 ---EGLY------KKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNF 330
+GLY + + I+ N IL + G++ L + LG
Sbjct: 542 LWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVY--------GLEQLNSDVCLG------ 587
Query: 331 TYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTA--KT------------------- 369
N A+ CK G A++++ MR KG T++ P+ KT
Sbjct: 588 MLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGE 647
Query: 370 ----------YAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKID 419
Y I+I L + + + L + S G + TY +I G+C G +
Sbjct: 648 TTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLV 707
Query: 420 EAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLI 479
EA + + + N G P VTY + LC +A KL M+ +P++ YN ++
Sbjct: 708 EALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIV 767
Query: 480 SMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
+ ++ + A D T MI+G EEA S+ E +K I
Sbjct: 768 DGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNIS 827
Query: 540 LPYKKFDSFLIQ 551
+ F FLI+
Sbjct: 828 ADFFGF-LFLIK 838
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 115/269 (42%), Gaps = 14/269 (5%)
Query: 201 KVKQFRIVCDMLDYMKRKNKS-TVPVEVLMTILR--KYTEKYLTHVQKFAKKKRIRVKTQ 257
K F ++ M+RK + T P +L T++ + + YL V A + + +
Sbjct: 598 KRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVN--AGETTL---SS 652
Query: 258 PEINAFNLLLDALCKCCLVEYAEGL--YKKMRKIINTNAETYNILVFGWCRVRSPTRGMK 315
++ + ++++ LCK + A L + K R + N TYN L+ G C+ ++
Sbjct: 653 MDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGV-TLNTITYNSLINGLCQQGCLVEALR 711
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
L + + +G P TY +D CK G+ +A L + M +KG P Y ++
Sbjct: 712 LFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLV---PNIIIYNSIVD 768
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
+ + E+ +++ + PD T +I+G C G ++EA E +K
Sbjct: 769 GYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISA 828
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMI 464
D + ++ C + EEA L M+
Sbjct: 829 DFFGFLFLIKGFCTKGRMEEARGLLREML 857
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 133/307 (43%), Gaps = 14/307 (4%)
Query: 283 YKKMRKIINTNAETYNI---------LVFGWCRVRS-PTRGMKLLEEMIQ-LGHRPDNFT 331
Y+ K IN + +I L+ G+ R P++G+ +L + ++ G P + T
Sbjct: 77 YEDAEKFINIHISKASIFPRTHMLDSLIHGFSITRDDPSKGLLILRDCLRNHGAFPSSLT 136
Query: 332 YNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMG 391
+ + + + + G + A+++ E M K A+ I + + E
Sbjct: 137 FCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAV-ISGFCKIGKPELALGFFE 195
Query: 392 YMISSGCL-PDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDN 450
+ SG L P++ TY ++ +C GK+DE + + ++G+ D V Y+ ++
Sbjct: 196 SAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKG 255
Query: 451 KKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTY 510
+AL M+E V +Y++LI + + + A +M K G + TY
Sbjct: 256 GALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITY 315
Query: 511 CVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLH-AIHKLSDHMR 569
+I GL K EEA L +++ GI++ + + + + G+L+ A L D +
Sbjct: 316 TAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQ 375
Query: 570 KFYNPAM 576
+ P++
Sbjct: 376 RGIQPSI 382
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 101/246 (41%), Gaps = 8/246 (3%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKL 316
QP I +N +++ LC V A+ ++ K + + TY+ L+ + +V++ +++
Sbjct: 379 QPSILTYNTVINGLCMAGRVSEAD----EVSKGVVGDVITYSTLLDSYIKVQNIDAVLEI 434
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
++ D N L + G EA L+ M T P TYA MI
Sbjct: 435 RRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLT---PDTATYATMIKG 491
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
+ ++EE ++ + S V Y II+ +C G +D A + L E+ KG D
Sbjct: 492 YCKTGQIEEALEMFNELRKSSVSAAV-CYNRIIDALCKKGMLDTATEVLIELWEKGLYLD 550
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQ 496
I T L + N + L L + +L + N I + + + A E +
Sbjct: 551 IHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYM 610
Query: 497 EMEKRG 502
M ++G
Sbjct: 611 IMRRKG 616
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 140/305 (45%), Gaps = 6/305 (1%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMK 315
+P + + +++ L + L++ ++ +M + ++ + +Y L+ + R ++
Sbjct: 138 KPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLE 197
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAV-DLFEFMRTKGSTISSPTAKTYAIMI 374
LL+ M P TYNT ++ + G+ E + LF MR +G P TY ++
Sbjct: 198 LLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGI---QPDIVTYNTLL 254
Query: 375 VTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYP 434
A +E + M G +PD+TTY ++E ++++ L EM + G
Sbjct: 255 SACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSL 314
Query: 435 PDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFET 494
PDI +YN L + +EA+ ++ +M C P+ TY++L+++F + D +
Sbjct: 315 PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQL 374
Query: 495 WQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSD 554
+ EM+ + D TY ++IE +E +L +++ + I+ + ++ +
Sbjct: 375 FLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGK 434
Query: 555 LGDLH 559
G LH
Sbjct: 435 -GGLH 438
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 127/313 (40%), Gaps = 37/313 (11%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINT-NAETYNILV--FGWCRVRSPTRGM 314
P+I ++N+LL+A K ++ A G++ +M+ T NA TY++L+ FG R
Sbjct: 315 PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVR-- 372
Query: 315 KLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFE------------------FMR 356
+L EM PD TYN ++ + + G E V LF F
Sbjct: 373 QLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFAC 432
Query: 357 TKGSTISS--------------PTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDV 402
KG P++K Y +I Q EE M G P +
Sbjct: 433 GKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSI 492
Query: 403 TTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGR 462
T+ ++ G + E+ L + + G P + T+N + K EEA+K Y
Sbjct: 493 ETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVD 552
Query: 463 MIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNK 522
M + RC P +T ++S++ D E ++EM+ YC+M+ +
Sbjct: 553 MEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTER 612
Query: 523 TEEACSLLEEVIN 535
++ LLEE+++
Sbjct: 613 WDDVNELLEEMLS 625
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/326 (19%), Positives = 124/326 (38%), Gaps = 52/326 (15%)
Query: 256 TQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGM 314
T P+ +N+L++ + + L+ M + I + ETY ++F +
Sbjct: 383 TDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDAR 442
Query: 315 KLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMI 374
K+L+ M P + Y ++ + +A + EA+ F M GS +P+ +T+ ++
Sbjct: 443 KILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGS---NPSIETFHSLL 499
Query: 375 VTLAQNDRMEECFKLMGYMISSG-----------------------------------CL 399
+ A+ ++E ++ ++ SG C
Sbjct: 500 YSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCD 559
Query: 400 PDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKL 459
PD T + ++ +DE + EEM P I+ Y L V ++ ++ +L
Sbjct: 560 PDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNEL 619
Query: 460 YGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEME-------KRGCNLDTDTYCV 512
M+ R V + +I + D D + WQ +E GC L Y
Sbjct: 620 LEEMLSNR----VSNIHQVIGQMIKGDYDDDS--NWQIVEYVLDKLNSEGCGLGIRFYNA 673
Query: 513 MIEGLFNCNKTEEACSLLEEVINKGI 538
+++ L+ + E A +L E +G+
Sbjct: 674 LLDALWWLGQKERAARVLNEATKRGL 699
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 165/367 (44%), Gaps = 19/367 (5%)
Query: 147 IPLST---PLVTGVLHRL---RYDEKIAFRFFTWAGNQENYSHEPCAYNDMMDILSSTKY 200
IPLS+ V+ VL RL + A FF ++ S ++ + IL+ +Y
Sbjct: 59 IPLSSLSPEFVSEVLGRLFAAHSNGLKALEFFKYSLKSSKSSPTSDSFEKTLHILARMRY 118
Query: 201 KVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEKYLTH---VQKFAKKKRIRVKTQ 257
+ + ++ ++ RK+ + M+IL K+ ++ ++ F K ++ + +
Sbjct: 119 FDQAWALMAEV-----RKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKK 173
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLL 317
++ FN+LL A C ++ A +++K+ N + +T NIL+ G+ T
Sbjct: 174 FGVDEFNILLRAFCTEREMKEARSIFEKLHSRFNPDVKTMNILLLGFKEAGDVTATELFY 233
Query: 318 EEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTL 377
EM++ G +P++ TY +D +CK EA+ LFE M I+ T I +
Sbjct: 234 HEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTL-IHGSGV 292
Query: 378 AQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDI 437
A+N + +L + G PD Y ++ + CG + A K ++EM KG PD
Sbjct: 293 ARNKI--KARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDS 350
Query: 438 VTYNCFLRVLCDNKK--SEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
VT++ + +K+ + Y +M E +P T ML+ +F + + + W
Sbjct: 351 VTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLW 410
Query: 496 QEMEKRG 502
+ M ++G
Sbjct: 411 KYMLEKG 417
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 101/445 (22%), Positives = 176/445 (39%), Gaps = 58/445 (13%)
Query: 167 IAFRFFTWAGNQENYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVE 226
+A FF WA Q YSH+ +Y+ + LS ++ QF + D L + NK +
Sbjct: 64 LALGFFNWAAQQPGYSHDSISYHSIFKSLSLSR----QFSAM-DALFKQVKSNKILLDSS 118
Query: 227 VLMTIL------RKYTEKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAE 280
V +++ RK + + F+ + I P++ N LL L +YA+
Sbjct: 119 VYRSLIDTLVLGRKAQSAFWVLEEAFSTGQEI----HPDV--CNRLLAGLTSDGCYDYAQ 172
Query: 281 GLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMKL----------------------- 316
L+ KMR K ++ N + + + +CR + ++L
Sbjct: 173 KLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSIIALLILHS 232
Query: 317 -------------LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTIS 363
LEE+ + +PD Y + + G + E + + R G
Sbjct: 233 LCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGV--- 289
Query: 364 SPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYK 423
+P + Y I+ L R+ E K + +I SG P D + G D A +
Sbjct: 290 APRSSDYRAFILDLISAKRLTEA-KEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVE 348
Query: 424 FLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFF 483
FL M + G P I T + + LC + KS+ +K Y + +Q+Y+++IS
Sbjct: 349 FLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLC 408
Query: 484 EMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYK 543
+ ++ QEM+K G D Y +IE A L +E+ +G K+
Sbjct: 409 KAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLT 468
Query: 544 KFDSFLIQLSDLGDLHAIHKLSDHM 568
++ + +LS+ G+ +L D M
Sbjct: 469 TYNVLIRKLSEEGEAEESLRLFDKM 493
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 131/305 (42%), Gaps = 6/305 (1%)
Query: 254 VKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTR 312
+ +P+ A+ ++ +A + + + KK RK+ + + Y + + T
Sbjct: 252 IDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTE 311
Query: 313 GMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAI 372
K + E+I G P + N LD + + EF+ ST P +T +
Sbjct: 312 A-KEVAEVIVSGKFPMD---NDILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSK 367
Query: 373 MIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKG 432
+ L ++D+ + K + S G ++ +Y +I +C G++ E+Y L+EM +G
Sbjct: 368 LSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEG 427
Query: 433 YPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAF 492
PD+ YN + C + A KL+ M C ++ TYN+LI E + + +
Sbjct: 428 LAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESL 487
Query: 493 ETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKK-FDSFLIQ 551
+ +M +RG D Y +IEGL K E A + + + + K ++ F++
Sbjct: 488 RLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRRVLSEFVLN 547
Query: 552 LSDLG 556
L G
Sbjct: 548 LCSNG 552
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 111/236 (47%), Gaps = 4/236 (1%)
Query: 266 LLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLG 324
++D LCK A+ L+ +M K I N TYN ++ +C + +LL MI+
Sbjct: 16 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 75
Query: 325 HRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRME 384
PD T++ ++ + K ++EA ++++ M + S PT TY MI + DR++
Sbjct: 76 INPDIVTFSALINAFVKERKVSEAEEIYKEM-LRWSIF--PTTITYNSMIDGFCKQDRVD 132
Query: 385 ECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFL 444
+ +++ M S GC PDV T+ +I G C ++D + EM +G + VTY +
Sbjct: 133 DAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLI 192
Query: 445 RVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEK 500
C + A L MI P T++ +++ + AF ++++K
Sbjct: 193 HGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 248
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 105/245 (42%), Gaps = 3/245 (1%)
Query: 326 RPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEE 385
+ D +D CK G A +LF M KG P TY MI + + R +
Sbjct: 7 KADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIF---PNVLTYNCMIDSFCHSGRWSD 63
Query: 386 CFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLR 445
+L+ +MI PD+ T+ +I K+ EA + +EM P +TYN +
Sbjct: 64 ADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMID 123
Query: 446 VLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNL 505
C + ++A ++ M C P V T++ LI+ + + D E + EM +RG
Sbjct: 124 GFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVA 183
Query: 506 DTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLS 565
+T TY +I G + A LL E+I+ G+ Y F L L +L +
Sbjct: 184 NTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAIL 243
Query: 566 DHMRK 570
+ ++K
Sbjct: 244 EDLQK 248
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 90/178 (50%), Gaps = 4/178 (2%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSP 310
I + P+I F+ L++A K V AE +YK+M R I TYN ++ G+C+
Sbjct: 72 IEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRV 131
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
++L+ M G PD T++T ++ YCKA + +++F M +G ++ TY
Sbjct: 132 DDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTV---TY 188
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEM 428
+I Q ++ L+ MIS G PD T+ ++ G+C ++ +A+ LE++
Sbjct: 189 TTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/375 (21%), Positives = 158/375 (42%), Gaps = 11/375 (2%)
Query: 169 FRFFTWAGNQENYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEVL 228
F F WA + + H+ ++ M L++T +R++ + + L
Sbjct: 97 FAVFNWAATLDTFRHDHDSFLWMSRSLAATHRFDDLYRLLSFVAANPCPCSSGIFSCPEL 156
Query: 229 MTILRKYTEKYLTHVQ------KFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGL 282
I R + Y + F KR+ + +P + +N +++ K ++ A
Sbjct: 157 EPIFRSAIDAYCRARKMDYALLAFDTMKRL-IDGKPNVGVYNTVVNGYVKSGDMDKALRF 215
Query: 283 YKKMRK-IINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCK 341
Y++M K + T+NIL+ G+CR + L EM + G P+ ++NT + +
Sbjct: 216 YQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLS 275
Query: 342 AGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPD 401
+G I E V + M G S T + I++ L + R+++ L+ +++ LP
Sbjct: 276 SGKIEEGVKMAYEMIELGCRFSEATCE---ILVDGLCREGRVDDACGLVLDLLNKRVLPS 332
Query: 402 VTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYG 461
Y ++E +C K A + +EE+ KG P + + L + ++E+A
Sbjct: 333 EFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFME 392
Query: 462 RMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCN 521
+M+ +P T+N+L+ D A +G D TY V++ G
Sbjct: 393 KMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEG 452
Query: 522 KTEEACSLLEEVINK 536
+ +E L+ E+++K
Sbjct: 453 RRKEGEVLVNEMLDK 467
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 126/309 (40%), Gaps = 49/309 (15%)
Query: 212 LDYMKRKNKSTVPVEVLMTILRKYT-----EKYLTHVQKFAKKKRIRVKTQPEINAFNLL 266
D MKR V V T++ Y +K L Q+ K++ +P++ FN+L
Sbjct: 180 FDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKER-----AKPDVCTFNIL 234
Query: 267 LDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGH 325
++ C+ + A L+++M+ K N ++N L+ G+ G+K+ EMI+LG
Sbjct: 235 INGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGC 294
Query: 326 R-----------------------------------PDNFTYNTALDTYCKAGMITEAVD 350
R P F Y + ++ C A++
Sbjct: 295 RFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAME 354
Query: 351 LFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIE 410
+ E + KG T P ++ L ++ R E+ M M+++G LPD T+ ++
Sbjct: 355 MMEELWKKGQT---PCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLR 411
Query: 411 GVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIP 470
+C +A + +KGY PD TY+ + + +E L M++ +P
Sbjct: 412 DLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLP 471
Query: 471 SVQTYNMLI 479
+ TYN L+
Sbjct: 472 DIFTYNRLM 480
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 106/237 (44%), Gaps = 4/237 (1%)
Query: 303 GWCRVRSPTRGMKLLEEMIQL-GHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGST 361
+CR R + + M +L +P+ YNT ++ Y K+G + +A+ ++ M G
Sbjct: 166 AYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRM---GKE 222
Query: 362 ISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEA 421
+ P T+ I+I ++ + + L M GC P+V ++ +I G GKI+E
Sbjct: 223 RAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEG 282
Query: 422 YKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISM 481
K EM G T + LC + ++A L ++ R +PS Y L+
Sbjct: 283 VKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEK 342
Query: 482 FFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGI 538
+ A E +E+ K+G ++EGL +TE+A +E+++N GI
Sbjct: 343 LCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGI 399
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 87/182 (47%), Gaps = 10/182 (5%)
Query: 369 TYAIMIVTLAQNDRMEECFKLMGYMISSGC--------LPDV-TTYKDIIEGVCLCGKID 419
++ M +LA R ++ ++L+ ++ ++ C P++ ++ I+ C K+D
Sbjct: 115 SFLWMSRSLAATHRFDDLYRLLSFVAANPCPCSSGIFSCPELEPIFRSAIDAYCRARKMD 174
Query: 420 EAYKFLEEMGNK-GYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNML 478
A + M P++ YN + + ++AL+ Y RM + R P V T+N+L
Sbjct: 175 YALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNIL 234
Query: 479 ISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGI 538
I+ + D A + ++EM+++GC + ++ +I G + K EE + E+I G
Sbjct: 235 INGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGC 294
Query: 539 KL 540
+
Sbjct: 295 RF 296
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 6/142 (4%)
Query: 276 VEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTA 335
+E E L+KK + T LV G + + +E+M+ G PD+ T+N
Sbjct: 353 MEMMEELWKKGQTPCFIACTT---LVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLL 409
Query: 336 LDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMIS 395
L C + T+A L +KG P TY +++ + R +E L+ M+
Sbjct: 410 LRDLCSSDHSTDANRLRLLASSKGY---EPDETTYHVLVSGFTKEGRRKEGEVLVNEMLD 466
Query: 396 SGCLPDVTTYKDIIEGVCLCGK 417
LPD+ TY +++G+ GK
Sbjct: 467 KDMLPDIFTYNRLMDGLSCTGK 488
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 131/305 (42%), Gaps = 32/305 (10%)
Query: 264 NLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKLLEEMIQ 322
+L+L CK + A +K+ R + I + YN+ ++ +LL+EM
Sbjct: 357 SLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKD 416
Query: 323 LGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDR 382
G PD Y T +D YC G + +A+DL + M G SP TY +++ LA+N
Sbjct: 417 RGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGM---SPDLITYNVLVSGLARNGH 473
Query: 383 MEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNK----------G 432
EE ++ M + G P+ T IIEG+C K+ EA F + K G
Sbjct: 474 EEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKG 533
Query: 433 YPPDIVT---YNCFLRV---------------LCDNKKSEEALKLYGRMIELRCIPSVQT 474
Y ++ Y F+R+ LC E+A + +M R P
Sbjct: 534 YCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSM 593
Query: 475 YNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVI 534
+I F ++++ A + M +RG D TY +MI N+ ++A SL E++
Sbjct: 594 CGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMK 653
Query: 535 NKGIK 539
+GIK
Sbjct: 654 QRGIK 658
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 88/176 (50%), Gaps = 3/176 (1%)
Query: 304 WCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTIS 363
+C+ + + L++M+ G + + + L YCK M EA++ F+ R +
Sbjct: 328 YCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLD 387
Query: 364 SPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYK 423
Y + L++ R+EE F+L+ M G +PDV Y +I+G CL GK+ +A
Sbjct: 388 RVC---YNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALD 444
Query: 424 FLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLI 479
++EM G PD++TYN + L N EE L++Y RM P+ T +++I
Sbjct: 445 LIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVII 500
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 104/233 (44%), Gaps = 11/233 (4%)
Query: 298 NILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRT 357
++V G+C ++ EM ++G D + +D YCK + EA+ + M
Sbjct: 287 GMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLG 346
Query: 358 KG----STISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVC 413
KG I S + Y M + L ++ +E F+ M + C Y + +
Sbjct: 347 KGLKVNCVIVSLILQCYCKMDMCLEALEKFKE-FRDMNIFLDRVC------YNVAFDALS 399
Query: 414 LCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQ 473
G+++EA++ L+EM ++G PD++ Y + C K +AL L MI P +
Sbjct: 400 KLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLI 459
Query: 474 TYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEA 526
TYN+L+S + E ++ M+ G + T V+IEGL K +EA
Sbjct: 460 TYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEA 512
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 137/320 (42%), Gaps = 33/320 (10%)
Query: 263 FNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMKLLEEMI 321
+N+ DAL K VE A L ++M+ + I + Y L+ G+C + L++EMI
Sbjct: 391 YNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMI 450
Query: 322 QLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQND 381
G PD TYN + + G E ++++E M+ +G P A T +++I L
Sbjct: 451 GNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGP---KPNAVTNSVIIEGLCFAR 507
Query: 382 RMEE-----------CFKLMGYMISSGCLPDVT--TYKDIIE---------------GVC 413
+++E C + + C ++ YK + +C
Sbjct: 508 KVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLC 567
Query: 414 LCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQ 473
+ G +++A+ L++M P + C EA L+ M+E IP +
Sbjct: 568 IEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLF 627
Query: 474 TYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCN-KTEEACSLLEE 532
TY ++I + +++ A +++M++RG D TY V+++ + + E CS+ E
Sbjct: 628 TYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGE 687
Query: 533 VINKGIKLPYKKFDSFLIQL 552
V + ++F + I L
Sbjct: 688 VGKRKASEVLREFSAAGIGL 707
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 86/431 (19%), Positives = 170/431 (39%), Gaps = 25/431 (5%)
Query: 157 VLHRLRYDEKIAFRFFTWAGNQENYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMK 216
+L+ R D +A F + S AY ++ IL++ +K ++ +++ +
Sbjct: 62 LLNSTRDDPNLALSFLRQL-KEHGVSPNVNAYATLVRILTTWGLDIKLDSVLVELIKNEE 120
Query: 217 R-----------------KNKSTVPVEVLMTILRKYTEKYLTHVQKFAKKKRIRVKTQPE 259
R K +S V + V +++ Y + + R+ +
Sbjct: 121 RGFTVMDLIEVIGEQAEEKKRSFVLIRVSGALVKAYVSLGMFDEATDVLFQSKRLDCVVD 180
Query: 260 INAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKLLE 318
I A N L++ + + + L+K+++++ + N TY I+V CR +G L E
Sbjct: 181 IKACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCR-----KG-NLEE 234
Query: 319 EMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLA 378
+ L F Y T ++ C G +AV L + + +++
Sbjct: 235 AAMLLIENESVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFC 294
Query: 379 QNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIV 438
+M+ ++ M G DV +I+ C + EA FL++M KG + V
Sbjct: 295 NEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCV 354
Query: 439 TYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEM 498
+ L+ C EAL+ + ++ YN+ ++ + AFE QEM
Sbjct: 355 IVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEM 414
Query: 499 EKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDL 558
+ RG D Y +I+G K +A L++E+I G+ ++ + L+ G
Sbjct: 415 KDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHE 474
Query: 559 HAIHKLSDHMR 569
+ ++ + M+
Sbjct: 475 EEVLEIYERMK 485
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 87/219 (39%), Gaps = 16/219 (7%)
Query: 296 TYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFM 355
Y L F C + +L++M P + +CK + EA LF+ M
Sbjct: 558 VYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTM 617
Query: 356 RTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDII------ 409
+G P TY IMI T + + +++ L M G PDV TY ++
Sbjct: 618 VERGLI---PDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKL 674
Query: 410 -----EGVCLCGKIDE--AYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGR 462
E + G++ + A + L E G D+V Y + C E+A +L+ R
Sbjct: 675 DPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDR 734
Query: 463 MIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKR 501
MI+ P + Y LIS +F D A E+ K+
Sbjct: 735 MIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKK 773
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 115/242 (47%), Gaps = 6/242 (2%)
Query: 262 AFNLLLDALCKCCLVEYAEGLYKKMRK-IINTNAETYNILVFGWCRVRSPTRGMKLLEEM 320
A+ ++ LC +E AE + M K I+ + Y+ ++ G + + + + + +M
Sbjct: 293 AYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKM 352
Query: 321 IQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQN 380
++ R + ++ L YC+ G +EA DLF+ R ++ Y + L +
Sbjct: 353 LKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVC---YNVAFDALGKL 409
Query: 381 DRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTY 440
++EE +L M G PDV Y +I G CL GK +A+ + EM G PDIV Y
Sbjct: 410 GKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIY 469
Query: 441 NCFLRVLCDNKKSEEALKLYGRMIELRCI-PSVQTYNMLISMFFEMDDPDGAFETWQEME 499
N L N ++EA + +M+E R + P+ T+NM+I + + D A ++ +E
Sbjct: 470 NVLAGGLATNGLAQEAFETL-KMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLE 528
Query: 500 KR 501
+
Sbjct: 529 HK 530
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 118/293 (40%), Gaps = 39/293 (13%)
Query: 276 VEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNT 334
+ A+ L +M K+ + Y L+ WCRV + + + E ++ PD FTY
Sbjct: 581 ISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTI 640
Query: 335 ALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMI 394
++TYC+ +A LFE M+ + P TY++++ + + D E M
Sbjct: 641 MINTYCRLNEPKQAYALFEDMKRRDV---KPDVVTYSVLLNSDPELDMKRE-------ME 690
Query: 395 SSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLR--------- 445
+ +PDV Y +I C + + Y ++M + PD+VTY L+
Sbjct: 691 AFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSR 750
Query: 446 ---------------VL----CDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMD 486
VL C EA +++ +MIE P Y LI+ +M
Sbjct: 751 EMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMG 810
Query: 487 DPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
A + M + G D Y +I G +A L++E++ KGIK
Sbjct: 811 YLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIK 863
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 123/301 (40%), Gaps = 35/301 (11%)
Query: 271 CKCCLVEYAEG--LYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRP 327
C C + ++E L+K+ R+ I+ + YN+ ++ ++L EM G P
Sbjct: 370 CYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAP 429
Query: 328 DNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECF 387
D Y T + C G ++A DL M G T P Y ++ LA N +E F
Sbjct: 430 DVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKT---PDIVIYNVLAGGLATNGLAQEAF 486
Query: 388 KLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKG--------------- 432
+ + M + G P T+ +IEG+ G++D+A F E + +K
Sbjct: 487 ETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAG 546
Query: 433 -------------YP-PDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNML 478
+P P V + F + + +A L RM +L P Y L
Sbjct: 547 CLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKL 606
Query: 479 ISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGI 538
I + +++ A E ++ + + D TY +MI N+ ++A +L E++ + +
Sbjct: 607 IGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDV 666
Query: 539 K 539
K
Sbjct: 667 K 667
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 11/179 (6%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKL 316
P++ + ++++ C ++ L+K M R+ I + TY +L+ P R +
Sbjct: 696 PDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLL-----KNKPERNLS- 749
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
EM +PD F Y +D CK G + EA +F+ M G P A Y +I
Sbjct: 750 -REMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGV---DPDAAPYTALIAC 805
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
+ ++E + MI SG PDV Y +I G C G + +A K ++EM KG P
Sbjct: 806 CCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKP 864
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 103/257 (40%), Gaps = 39/257 (15%)
Query: 253 RVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPT 311
++ +PE + + L+ A C+ V A ++ + K I + TY I++ +CR+ P
Sbjct: 593 KLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPK 652
Query: 312 RGMKLLEEMIQLGHRPDNFTYNTALDT----------------------------YCKAG 343
+ L E+M + +PD TY+ L++ YC
Sbjct: 653 QAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIPDVVYYTIMINRYCHLN 712
Query: 344 MITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVT 403
+ + LF+ M+ + P TY +++ + + E M + PDV
Sbjct: 713 DLKKVYALFKDMKRREIV---PDVVTYTVLLKNKPERNLSRE-------MKAFDVKPDVF 762
Query: 404 TYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRM 463
Y +I+ C G + EA + ++M G PD Y + C +EA ++ RM
Sbjct: 763 YYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRM 822
Query: 464 IELRCIPSVQTYNMLIS 480
IE P V Y LI+
Sbjct: 823 IESGVKPDVVPYTALIA 839
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 95/255 (37%), Gaps = 42/255 (16%)
Query: 323 LGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDR 382
LG PD N + +G V F + G A TY +++ L +ND
Sbjct: 176 LGRAPDIKALNFLISRMIASGRSDMVVGFFWEIERLGL---DADAHTYVLVVQALWRNDD 232
Query: 383 MEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLE---------------- 426
EE KL+ ++ S Y + IEG+CL D AY L+
Sbjct: 233 KEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGI 292
Query: 427 -----------------------EMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRM 463
+M G PD+ Y+ + N +A+ ++ +M
Sbjct: 293 AYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKM 352
Query: 464 IELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKT 523
++ R + + ++ + +M + A++ ++E + +LD Y V + L K
Sbjct: 353 LKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKV 412
Query: 524 EEACSLLEEVINKGI 538
EEA L E+ KGI
Sbjct: 413 EEAIELFREMTGKGI 427
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 114/282 (40%), Gaps = 17/282 (6%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMKL 316
P+I +N+L L L + A K M + + T+N+++ G +
Sbjct: 464 PDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAF 523
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
E + D + + +C AG + A + F+R + P + + +
Sbjct: 524 YESLEHKSRENDA----SMVKGFCAAGCLDHAFE--RFIRLE---FPLPKSVYFTLFTSL 574
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
A+ D + + L+ M G P+ + Y +I C + +A +F E + K PD
Sbjct: 575 CAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPD 634
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQ 496
+ TY + C + ++A L+ M P V TY++L++ DP+ + +
Sbjct: 635 LFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLN-----SDPE--LDMKR 687
Query: 497 EMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGI 538
EME D Y +MI + N ++ +L +++ + I
Sbjct: 688 EMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREI 729
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 115/259 (44%), Gaps = 5/259 (1%)
Query: 275 LVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKLLEEMIQ-LGHRPDNFTY 332
+ E+A L+ +M ++ +++N L+ + + MK +E+ + LG PD TY
Sbjct: 137 MAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTY 196
Query: 333 NTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGY 392
NT + C+ G + + + +FE + G P ++ ++ + + E ++
Sbjct: 197 NTMIKALCRKGSMDDILSIFEELEKNGF---EPDLISFNTLLEEFYRRELFVEGDRIWDL 253
Query: 393 MISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKK 452
M S P++ +Y + G+ K +A ++ M +G PD+ TYN + +
Sbjct: 254 MKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNN 313
Query: 453 SEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCV 512
EE +K Y M E P TY MLI + + D D A E +E K + Y
Sbjct: 314 LEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKP 373
Query: 513 MIEGLFNCNKTEEACSLLE 531
++E L K +EA L++
Sbjct: 374 VVERLMGAGKIDEATQLVK 392
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 109/236 (46%), Gaps = 4/236 (1%)
Query: 299 ILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTK 358
+L++G+ + KL +EM +L ++N L Y + + EA+ F+ + K
Sbjct: 129 MLLYGYSGM--AEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEK 186
Query: 359 GSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKI 418
+P TY MI L + M++ + + +G PD+ ++ ++E
Sbjct: 187 LGI--TPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELF 244
Query: 419 DEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNML 478
E + + M +K P+I +YN +R L NKK +AL L M P V TYN L
Sbjct: 245 VEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNAL 304
Query: 479 ISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVI 534
I+ + ++ + + + EM+++G DT TYC++I L + A + EE I
Sbjct: 305 ITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAI 360
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 101/242 (41%), Gaps = 37/242 (15%)
Query: 238 KYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETY 297
K L K K+ ++ P++ +N ++ ALC+ ++
Sbjct: 171 KKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMD-------------------- 210
Query: 298 NILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRT 357
+IL + EE+ + G PD ++NT L+ + + + E +++ M++
Sbjct: 211 DIL--------------SIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKS 256
Query: 358 KGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGK 417
K SP ++Y + L +N + + L+ M + G PDV TY +I +
Sbjct: 257 KN---LSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNN 313
Query: 418 IDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNM 477
++E K EM KG PD VTY + +LC + A+++ I+ + + Y
Sbjct: 314 LEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKP 373
Query: 478 LI 479
++
Sbjct: 374 VV 375
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 82/201 (40%), Gaps = 4/201 (1%)
Query: 339 YCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISS-G 397
Y +GM A LF+ M T K++ ++ + +++E K + G
Sbjct: 132 YGYSGMAEHAHKLFDEMPELNC---ERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLG 188
Query: 398 CLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEAL 457
PD+ TY +I+ +C G +D+ EE+ G+ PD++++N L + E
Sbjct: 189 ITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGD 248
Query: 458 KLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGL 517
+++ M P++++YN + A M+ G + D TY +I
Sbjct: 249 RIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAY 308
Query: 518 FNCNKTEEACSLLEEVINKGI 538
N EE E+ KG+
Sbjct: 309 RVDNNLEEVMKCYNEMKEKGL 329
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 148/340 (43%), Gaps = 20/340 (5%)
Query: 215 MKRKNKSTVPVEVLMTILRKY----TEKYLTHVQKFAKKKRIRV-----------KTQPE 259
MKRK + ++V + R TE Y + + K + + + +P
Sbjct: 261 MKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPN 320
Query: 260 INAFNLLLDALCKCCLVEYAEGLYKKMRK-IINTNAETYNILVFGWCRVRSPTRGMKLLE 318
I + L++A + L E AE +++++++ + + YN L+ + R P ++
Sbjct: 321 ICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFS 380
Query: 319 EMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLA 378
M +G PD +YN +D Y +AG+ ++A +FE M+ G +PT K++ +++ +
Sbjct: 381 LMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGI---APTMKSHMLLLSAYS 437
Query: 379 QNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIV 438
+ + +C ++ M +G PD ++ G+ + K L EM N DI
Sbjct: 438 KARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADIS 497
Query: 439 TYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEM 498
TYN + + E +L+ + E P V T+ I + E ++EM
Sbjct: 498 TYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEM 557
Query: 499 EKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGI 538
GC D T V++ + + E+ S+L ++KG+
Sbjct: 558 IDSGCAPDGGTAKVLLSACSSEEQVEQVTSVL-RTMHKGV 596
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 136/318 (42%), Gaps = 10/318 (3%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKM--RKIINTNAETYNILVFGWCRVRSPTRGM 314
QP++ FNLL+DA + + AE LY ++ + + T +TY +L+ +C R
Sbjct: 174 QPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTE-DTYALLIKAYCMAGLIERAE 232
Query: 315 KLLEEMIQLGHRPDNF---TYNTALDTYCK-AGMITEAVDLFEFMRTKGSTISSPTAKTY 370
+L EM P YN ++ K G EA+D+F+ M+ PT +TY
Sbjct: 233 VVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRC---KPTTETY 289
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGN 430
+MI + + +KL M S C P++ TY ++ G ++A + E++
Sbjct: 290 NLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQE 349
Query: 431 KGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDG 490
G PD+ YN + A +++ M + C P +YN+++ +
Sbjct: 350 DGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSD 409
Query: 491 AFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLI 550
A ++EM++ G ++ +++ + ++++E+ G++ +S L
Sbjct: 410 AEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLN 469
Query: 551 QLSDLGDLHAIHKLSDHM 568
LG + K+ M
Sbjct: 470 LYGRLGQFTKMEKILAEM 487
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/328 (20%), Positives = 135/328 (41%), Gaps = 13/328 (3%)
Query: 187 AYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEKYLTHVQKF 246
+++D++++ + K I+ + +++ RK+ V ++ Y +K+ +
Sbjct: 140 SWDDLINVSVQLRLNKKWDSIIL-VCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAES 198
Query: 247 AKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR------KIINTNAETYNIL 300
+ + + P + + LL+ A C L+E AE + +M+ K I YN
Sbjct: 199 LYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVT--VYNAY 256
Query: 301 VFGWCRVRSPTR-GMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKG 359
+ G + + T + + + M + +P TYN ++ Y KA + L+ MR
Sbjct: 257 IEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMR--- 313
Query: 360 STISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKID 419
S P TY ++ A+ E+ ++ + G PDV Y ++E G
Sbjct: 314 SHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPY 373
Query: 420 EAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLI 479
A + M + G PD +YN + +A ++ M L P+++++ +L+
Sbjct: 374 GAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLL 433
Query: 480 SMFFEMDDPDGAFETWQEMEKRGCNLDT 507
S + + D +EM + G DT
Sbjct: 434 SAYSKARDVTKCEAIVKEMSENGVEPDT 461
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 153/345 (44%), Gaps = 28/345 (8%)
Query: 146 AIPLSTPLVTGVLHRLRYDEKIAFRFFTWAGNQENYSHEPCAYNDMMDILSSTKYKVKQF 205
A PL+ V L D K FF W Q NY H+ A++ M+ ++ +++
Sbjct: 34 AKPLTHDNVYSCLRESPADLK-TLNFFFWCAKQNNYFHDDRAFDHMVGVVEKL---TREY 89
Query: 206 RIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEKYLTHVQKFAKKKRIRVKTQ-------P 258
+ +++ +K P V + +L + ++ K I V T P
Sbjct: 90 YSIDRIIERLKISGCEIKP-RVFLLLLEIFWRGHIY-------DKAIEVYTGMSSFGFVP 141
Query: 259 EINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCR--VRSPTRGMKL 316
A N+++D K +V A +++ +R N +++I + +C R G+K+
Sbjct: 142 NTRAMNMMMDVNFKLNVVNGALEIFEGIR---FRNFFSFDIALSHFCSRGGRGDLVGVKI 198
Query: 317 -LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
L+ MI G P+ + L C+ G ++EA + M G ++S +++++
Sbjct: 199 VLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVS---VNVWSMLVS 255
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
++ ++ L MI GC P++ TY +I+G G +DEA+ L ++ ++G P
Sbjct: 256 GFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAP 315
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLIS 480
DIV N + + EEA K++ + + + +P T+ ++S
Sbjct: 316 DIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILS 360
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 132/327 (40%), Gaps = 36/327 (11%)
Query: 245 KFAKKKRIRVKTQPEINAFNLLLDALCKC-CLVEYAEGLYKKMRKIINTNAETYNILVFG 303
K K+ I P F +L C+ C+ E + + + I+ + +++LV G
Sbjct: 197 KIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSG 256
Query: 304 WCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTIS 363
+ R P + + L +MIQ+G P+ TY + + + GM+ EA + ++++G
Sbjct: 257 FFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGL--- 313
Query: 364 SPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKID---- 419
+P +MI T + R EE K+ + +PD T+ I+ +CL GK D
Sbjct: 314 APDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPR 373
Query: 420 ----------------------------EAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNK 451
A K L M K + D TY +L LC
Sbjct: 374 ITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGG 433
Query: 452 KSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYC 511
A+K+Y +I+ + ++ +I E+ + A ++ LD +Y
Sbjct: 434 APRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYT 493
Query: 512 VMIEGLFNCNKTEEACSLLEEVINKGI 538
V I+GL + EEA SL ++ GI
Sbjct: 494 VAIKGLVRAKRIEEAYSLCCDMKEGGI 520
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 93/215 (43%), Gaps = 4/215 (1%)
Query: 312 RGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYA 371
+ +++ M G P+ N +D K ++ A+++FE +R + + S A ++
Sbjct: 126 KAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFR-NFFSFDIALSH- 183
Query: 372 IMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNK 431
+ + ++ MI G P+ + I+ C G + EA++ + M
Sbjct: 184 --FCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICS 241
Query: 432 GYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGA 491
G + ++ + + + ++A+ L+ +MI++ C P++ TY LI F ++ D A
Sbjct: 242 GISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEA 301
Query: 492 FETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEA 526
F +++ G D +MI + EEA
Sbjct: 302 FTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEA 336
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 149/342 (43%), Gaps = 20/342 (5%)
Query: 215 MKRKNKSTVPVEVLMTILRKY----TEKYLTHVQKFAKKKRIRV-----------KTQPE 259
MKRK + ++V + R TE Y + + K + + + +P
Sbjct: 239 MKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPN 298
Query: 260 INAFNLLLDALCKCCLVEYAEGLYKKMRK-IINTNAETYNILVFGWCRVRSPTRGMKLLE 318
I + L++A + L E AE +++++++ + + YN L+ + R P ++
Sbjct: 299 ICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFS 358
Query: 319 EMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLA 378
M +G PD +YN +D Y +AG+ ++A +FE M+ G +PT K++ +++ +
Sbjct: 359 LMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGI---APTMKSHMLLLSAYS 415
Query: 379 QNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIV 438
+ + +C ++ M +G PD ++ G+ + K L EM N DI
Sbjct: 416 KARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADIS 475
Query: 439 TYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEM 498
TYN + + E +L+ + E P V T+ I + E ++EM
Sbjct: 476 TYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEM 535
Query: 499 EKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKL 540
GC D T V++ + + E+ S+L ++KG+ +
Sbjct: 536 IDSGCAPDGGTAKVLLSACSSEEQVEQVTSVL-RTMHKGVTV 576
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 136/318 (42%), Gaps = 10/318 (3%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKM--RKIINTNAETYNILVFGWCRVRSPTRGM 314
QP++ FNLL+DA + + AE LY ++ + + T +TY +L+ +C R
Sbjct: 152 QPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTE-DTYALLIKAYCMAGLIERAE 210
Query: 315 KLLEEMIQLGHRPDNF---TYNTALDTYCK-AGMITEAVDLFEFMRTKGSTISSPTAKTY 370
+L EM P YN ++ K G EA+D+F+ M+ PT +TY
Sbjct: 211 VVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRC---KPTTETY 267
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGN 430
+MI + + +KL M S C P++ TY ++ G ++A + E++
Sbjct: 268 NLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQE 327
Query: 431 KGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDG 490
G PD+ YN + A +++ M + C P +YN+++ +
Sbjct: 328 DGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSD 387
Query: 491 AFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLI 550
A ++EM++ G ++ +++ + ++++E+ G++ +S L
Sbjct: 388 AEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLN 447
Query: 551 QLSDLGDLHAIHKLSDHM 568
LG + K+ M
Sbjct: 448 LYGRLGQFTKMEKILAEM 465
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 135/329 (41%), Gaps = 13/329 (3%)
Query: 186 CAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEKYLTHVQK 245
+++D++++ + K I+ + +++ RK+ V ++ Y +K+ +
Sbjct: 117 ASWDDLINVSVQLRLNKKWDSIIL-VCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAE 175
Query: 246 FAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR------KIINTNAETYNI 299
+ + + P + + LL+ A C L+E AE + +M+ K I YN
Sbjct: 176 SLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVT--VYNA 233
Query: 300 LVFGWCRVRSPTR-GMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTK 358
+ G + + T + + + M + +P TYN ++ Y KA + L+ MR
Sbjct: 234 YIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMR-- 291
Query: 359 GSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKI 418
S P TY ++ A+ E+ ++ + G PDV Y ++E G
Sbjct: 292 -SHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYP 350
Query: 419 DEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNML 478
A + M + G PD +YN + +A ++ M L P+++++ +L
Sbjct: 351 YGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLL 410
Query: 479 ISMFFEMDDPDGAFETWQEMEKRGCNLDT 507
+S + + D +EM + G DT
Sbjct: 411 LSAYSKARDVTKCEAIVKEMSENGVEPDT 439
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 117/255 (45%), Gaps = 1/255 (0%)
Query: 296 TYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFM 355
TYN + R S +++EM G+ D TY + K+ M+ E V L+E+M
Sbjct: 265 TYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYM 324
Query: 356 RTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLC 415
G S + + ++ + N ++ F++ S+G Y I +
Sbjct: 325 -MDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSV 383
Query: 416 GKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTY 475
G+ DEA + + M N GY PD +TY+ + LC K+ EEA + +M C P ++T+
Sbjct: 384 GRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTW 443
Query: 476 NMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVIN 535
+LI + ++ D A + M ++G ++D++ V+I+G NK E A L E++
Sbjct: 444 TILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVK 503
Query: 536 KGIKLPYKKFDSFLI 550
P++ LI
Sbjct: 504 NANVKPWQSTYKLLI 518
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 142/339 (41%), Gaps = 39/339 (11%)
Query: 254 VKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILV--FG------- 303
K P + A+N++L + + + A GL+ +MR + + + TY+ L+ FG
Sbjct: 149 AKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDS 208
Query: 304 ---WCRVRSPTR---GMKLLEEMIQLGHR--------------------PDNFTYNTALD 337
W + R + L +I+L R PD YN+ ++
Sbjct: 209 ALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMIN 268
Query: 338 TYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSG 397
Y KA + EA L + M G P +Y+ ++ +N + E + M
Sbjct: 269 VYGKAKLFREARLLIKEMNEAGVL---PNTVSYSTLLSVYVENHKFLEALSVFAEMKEVN 325
Query: 398 CLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEAL 457
C D+TT +I+ + EA + + P++V+YN LRV + + EA+
Sbjct: 326 CALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAI 385
Query: 458 KLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGL 517
L+ M +V TYN +I ++ + + + A QEM+ RG + TY +I
Sbjct: 386 HLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIW 445
Query: 518 FNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLG 556
K + A +L +++ + G+++ + + ++ +G
Sbjct: 446 GKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVG 484
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 123/282 (43%), Gaps = 15/282 (5%)
Query: 253 RVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPT 311
++ +P + ++N +L + L A L++ M RK I N TYN ++ + +
Sbjct: 358 KMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHE 417
Query: 312 RGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYA 371
+ L++EM G P+ TY+T + + KAG + A LF+ +R+ G I Y
Sbjct: 418 KATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVL---YQ 474
Query: 372 IMIVTLAQNDRMEECFKLMGY---MISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEM 428
MIV E LMG+ ++ LPD + I + G+ +EA +
Sbjct: 475 TMIVAY-------ERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQA 527
Query: 429 GNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDP 488
G DI + C + + N++ ++++ +M P M+++ + + +
Sbjct: 528 FESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREF 587
Query: 489 DGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLL 530
+ A ++EM++ GC + + M+ L++ K E L
Sbjct: 588 EKADTVYREMQEEGCVFPDEVHFQML-SLYSSKKDFEMVESL 628
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/441 (21%), Positives = 176/441 (39%), Gaps = 43/441 (9%)
Query: 117 LDSDVDKVCNTMMDNLHGFNNLEKALDQLAI----PLSTPLVTGVLHRLRYDEKIAFRFF 172
LD +VD + ++ ++H N ++ L+ LS + +L R D + +
Sbjct: 86 LDHNVD--MDELLASIHQTQNEKELFSLLSTYKDRQLSIRFMVSLLSR-ENDWQRSLALL 142
Query: 173 TWAGNQENYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTIL 232
W + Y+ AYN ++ + KQF I + D M+++ + P
Sbjct: 143 DWVHEEAKYTPSVFAYN----VVLRNVLRAKQFDIAHGLFDEMRQR--ALAP-------- 188
Query: 233 RKYTEKYLTHVQKFAK-----------KKRIRVKTQPEINAFNLLLDALCKCCLVEYAEG 281
+YT Y T + F K +K + + ++ ++ L++ + C A
Sbjct: 189 DRYT--YSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAIS 246
Query: 282 LYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYC 340
++ ++ R I + YN ++ + + + L++EM + G P+ +Y+T L Y
Sbjct: 247 IFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYV 306
Query: 341 KAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLP 400
+ EA+ +F M+ + T IMI Q D ++E +L + P
Sbjct: 307 ENHKFLEALSVFAEMKEVNCALDLTTCN---IMIDVYGQLDMVKEADRLFWSLRKMDIEP 363
Query: 401 DVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLY 460
+V +Y I+ EA M K ++VTYN +++ + E+A L
Sbjct: 364 NVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLV 423
Query: 461 GRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNC 520
M P+ TY+ +IS++ + D A +Q++ G +D Y MI
Sbjct: 424 QEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERV 483
Query: 521 NKTEEACSLLEEVINKGIKLP 541
A LL E +KLP
Sbjct: 484 GLMGHAKRLLHE-----LKLP 499
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 122/293 (41%), Gaps = 39/293 (13%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKL 316
P + LL+++LCK A + + M RK YNI + G C + +PT + +
Sbjct: 375 PSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNV 434
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
L M+Q RPD +T NT ++ CK G + +A+ + + M T +P A T ++
Sbjct: 435 LVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMT--GKFCAPDAVTLNTVMCG 492
Query: 377 LAQNDRMEEC---------------------------FKL---------MGYMISSGCLP 400
L R EE FKL G + +
Sbjct: 493 LLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTA 552
Query: 401 DVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLY 460
D TTY II+G+C+ K+D A KF +++ D Y FL+ LC + +A
Sbjct: 553 DSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFL 612
Query: 461 GRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVM 513
+ + IP+V YN +I+ A++ +EM K G D T+ ++
Sbjct: 613 YDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRIL 665
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/405 (20%), Positives = 165/405 (40%), Gaps = 45/405 (11%)
Query: 206 RIVCDMLDYMKRKNKSTVPVEVLMTILRKY-TEKYLTHVQKFAKKKRIRVKTQPEINAFN 264
+++ ++ +YMK + +++ ++ E Y + + A+ + E A+
Sbjct: 253 KLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEF-AYG 311
Query: 265 LLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQL 323
++D+LC+ A + M+ K + +YN ++ G C+ R +LLEE +
Sbjct: 312 HMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEF 371
Query: 324 GHRPDNFTYNTALDTYCKAGMITEAVDLFEFM-RTKGSTISSPTAKTYAIMIVTLAQNDR 382
P +TY +++ CK +A ++ E M R +G+ + Y I + L D
Sbjct: 372 EFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGAD----RTRIYNIYLRGLCVMDN 427
Query: 383 MEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMG------------- 429
E ++ M+ C PD T +I G+C G++D+A K L++M
Sbjct: 428 PTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLN 487
Query: 430 -------------------NKGYP-----PDIVTYNCFLRVLCDNKKSEEALKLYGRMIE 465
N+ P P +V YN +R L K +EA+ ++G++ +
Sbjct: 488 TVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEK 547
Query: 466 LRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEE 525
TY ++I + D A + W ++ D Y ++GL +
Sbjct: 548 ASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSD 607
Query: 526 ACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMRK 570
AC L ++ + G +++ + + S G +++ + MRK
Sbjct: 608 ACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRK 652
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 122/290 (42%), Gaps = 9/290 (3%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKL 316
P++ F L+ C+ +E A ++ +MR I N+ T ++L+ G+ ++R G KL
Sbjct: 195 PDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKL 254
Query: 317 LEEMIQLGHRPDNFTYNTA-----LDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYA 371
++E+ + + + A +D+ C+ G D+FE S Y
Sbjct: 255 MKELWEYMKNETDTSMKAAAFANLVDSMCREGYFN---DIFEIAENMSLCESVNVEFAYG 311
Query: 372 IMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNK 431
MI +L + R +++ M S G P T+Y II G+C G AY+ LEE
Sbjct: 312 HMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEF 371
Query: 432 GYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGA 491
+ P TY + LC + +A + M+ + YN+ + MD+P
Sbjct: 372 EFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEI 431
Query: 492 FETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLP 541
M + C D T +I GL + ++A +L++++ P
Sbjct: 432 LNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAP 481
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 98/208 (47%), Gaps = 14/208 (6%)
Query: 308 RSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTA 367
R+P +++L+ + G+RPD+ ++ + + C AG EA F G P
Sbjct: 69 RNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFI---PDE 125
Query: 368 KTYAIMIVTLAQNDRMEECFKLMGYMIS--SGCLPDVTTYKDIIEGVCLCGKIDEAYKFL 425
+T ++I L + ++ +I +P +T Y ++ +C ++ +A+K +
Sbjct: 126 RTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLV 185
Query: 426 EEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEM 485
+M N+G+ PD+VT+ + C+ ++ E A K++ M P+ T ++LI F +M
Sbjct: 186 FDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKM 245
Query: 486 DDPDGAF----ETWQEMEKRGCNLDTDT 509
D + E W+ M+ +TDT
Sbjct: 246 RDVETGRKLMKELWEYMKN-----ETDT 268
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 133/324 (41%), Gaps = 9/324 (2%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMRKIIN-TNAETYNILVFGWCRVRSPTRGMKL 316
P + +N L++ LC V A L MR + + T+ L+ G+C +R K+
Sbjct: 160 PSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKV 219
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEA----VDLFEFMRTKGSTISSPTAKTYAI 372
+EM G RP++ T + + + K + +L+E+M K T +S A +A
Sbjct: 220 FDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYM--KNETDTSMKAAAFAN 277
Query: 373 MIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKG 432
++ ++ + + F++ M + Y +I+ +C + A + + M +KG
Sbjct: 278 LVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKG 337
Query: 433 YPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAF 492
P +YN + LC + A +L E PS TY +L+ + D A
Sbjct: 338 LKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKAR 397
Query: 493 ETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQL 552
+ M ++ T Y + + GL + E ++L ++ + ++ + L
Sbjct: 398 NVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGL 457
Query: 553 SDLGDLHAIHKLSDHM--RKFYNP 574
+G + K+ D M KF P
Sbjct: 458 CKMGRVDDAMKVLDDMMTGKFCAP 481
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 113/246 (45%), Gaps = 8/246 (3%)
Query: 294 AETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCK-AGMITEAVDLF 352
E + L+ + + P + + +M++ P N LD G + +A +LF
Sbjct: 119 GEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELF 178
Query: 353 EFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGV 412
+ R G P ++Y +++ ND + ++L G M+ +PDV +YK +I+G
Sbjct: 179 KSSRLHGVM---PNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGF 235
Query: 413 CLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSV 472
C G+++ A + L++M NKG+ PD + LCD +E K MI P
Sbjct: 236 CRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHF 291
Query: 473 QTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEE 532
N L+ F + A + + + K G L +DT+ ++I + N +++E+ LE+
Sbjct: 292 SVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLED 351
Query: 533 VINKGI 538
+ + I
Sbjct: 352 AVKEEI 357
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/413 (21%), Positives = 163/413 (39%), Gaps = 54/413 (13%)
Query: 148 PLSTPLVTGVLHRLRYDEKIAFRFFTWAGNQENYSHEPCAYNDMMDILSSTKYKVKQFRI 207
P+ +P L + D +A F +A Q N+ H ++ ++ L +Y F +
Sbjct: 47 PIGSPTRVQKLIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRY----FNL 102
Query: 208 VCDMLDYMKRKNKSTVPV--EVLMTILRKYTEKYLTHVQKFAKKKRIRVKTQPEINAFNL 265
+ D+L + S P+ E+ +++ Y E L K + P+ N
Sbjct: 103 IDDVL---AKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNR 159
Query: 266 LLDALCKC-CLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQL 323
+LD L ++ A L+K R + N +YN+L+ +C + +L +M++
Sbjct: 160 ILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLER 219
Query: 324 GHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRM 383
PD +Y + +C+ G + A++L +
Sbjct: 220 DVVPDVDSYKILIQGFCRKGQVNGAMELLD------------------------------ 249
Query: 384 EECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCF 443
M++ G +PD T +I G+C G DE K+LEEM +KG+ P NC
Sbjct: 250 --------DMLNKGFVPDRT----LIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCL 297
Query: 444 LRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGC 503
++ C K EEA + +++ T+ M+I + D+ + ++ K
Sbjct: 298 VKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEI 357
Query: 504 NLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLG 556
DT V IE + E+ + E V + +K + ++ L+D+G
Sbjct: 358 TGDTRIVDVGIENK-KMPEIEQDDAAAETVDSSTVKFGTPEALEYVRSLTDVG 409
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 141/319 (44%), Gaps = 10/319 (3%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMKL 316
P I F +L+ L +E A + + M K + Y+ L+ G + +KL
Sbjct: 199 PSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKL 258
Query: 317 LEEMIQL--GHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMI 374
+E+ + G D Y + Y M EA++ +E + S + +A Y ++
Sbjct: 259 YQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRM-SAMAYNYVL 317
Query: 375 VTLAQNDRMEECFKLMGYMISSGCLP-----DVTTYKDIIEGVCLCGKIDEAYKFLEEMG 429
L++N + +E KL + P ++ T+ ++ G C GK +EA + +MG
Sbjct: 318 EALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMG 377
Query: 430 NKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPD 489
+ PD +++N + LCDN+ EA KLYG M E P TY +L+ F+ D
Sbjct: 378 DFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKID 437
Query: 490 GAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFL 549
++ M + + Y + + L K ++A S + +++K +K+ + + +
Sbjct: 438 EGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSK-LKMDDEAYKFIM 496
Query: 550 IQLSDLGDLHAIHKLSDHM 568
LS+ G L + K+ D M
Sbjct: 497 RALSEAGRLDEMLKIVDEM 515
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 94/217 (43%), Gaps = 9/217 (4%)
Query: 365 PTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKID---EA 421
PT T ++ + + +L G++ +G P++ TY I + K + E
Sbjct: 128 PTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEH 187
Query: 422 YKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISM 481
YK + N P I T+ ++ L N E+A+++ M + Y+ L+
Sbjct: 188 YKLF--IDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMG 245
Query: 482 FFEMDDPDGAFETWQEM-EKRGCNLDTD-TYCVMIEGLFNCNKTEEACSLLEEVI--NKG 537
+ D DG + +QE+ EK G +D Y +++G F +EA EE + N
Sbjct: 246 CVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSK 305
Query: 538 IKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMRKFYNP 574
+++ ++ L LS+ G KL D ++K +NP
Sbjct: 306 VRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNP 342
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 5/141 (3%)
Query: 255 KTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRG 313
K P+ +FN L++ LC L+ AE LY +M K + + TY +L+ + G
Sbjct: 380 KCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEG 439
Query: 314 MKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIM 373
+ M++ RP+ YN D KAG + +A F+ M +K + Y +
Sbjct: 440 AAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSKLKM----DDEAYKFI 495
Query: 374 IVTLAQNDRMEECFKLMGYMI 394
+ L++ R++E K++ M+
Sbjct: 496 MRALSEAGRLDEMLKIVDEML 516
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 102/463 (22%), Positives = 175/463 (37%), Gaps = 44/463 (9%)
Query: 66 SSNPLIQSSFPMNSSVAYHFSMRCYCSETVPXXXXXXXXXDFGSGMSNVVQLDSDVDKVC 125
SS PL P SS+ F R + SET N D +++
Sbjct: 35 SSKPLFSPLPPSRSSIFSTFPSRFFSSET------------------NAESESLDSNEIA 76
Query: 126 NTMMDNLHGFNNLEKALDQLAIPLS----TPLVTGVLHRLRYDE---KIAFRFFTWAGNQ 178
+ L G + E LS TP +L L + A F W +
Sbjct: 77 LSFSKELTGNPDAESQTISQRFNLSFSHITPNPDLILQTLNLSPEAGRAALGFNEWLDSN 136
Query: 179 ENYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEK 238
N+SH + +D + K F+ + +++ K + ++R K
Sbjct: 137 SNFSHTDETVSFFVDYFG----RRKDFKGMLEIISKYKGIAGGKTLESAIDRLVRAGRPK 192
Query: 239 YLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYN 298
+T F +K + + + L++ LC+ AE + K I + +
Sbjct: 193 QVTD---FFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMVKNTANEIFPDENICD 249
Query: 299 ILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKA-------GMITEAVDL 351
+L+ GWC +L EM + G YN LD CK + E +
Sbjct: 250 LLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKV 309
Query: 352 FEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEG 411
M +G ++ +T+ ++I L + R EE L G M GC PD TY +I
Sbjct: 310 LLEMEFRGVPRNT---ETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRS 366
Query: 412 VCLCGKIDEAYKFLEEMGNKGYPP--DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCI 469
+ +I E + +++M + GY + Y FL++LC ++ E A+ ++ M C
Sbjct: 367 LYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCK 426
Query: 470 PSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCV 512
P ++TY++L+ + A ++E K+G + Y V
Sbjct: 427 PGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAVSPKEYRV 469
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 122/303 (40%), Gaps = 48/303 (15%)
Query: 331 TYNTALDTYCKAGMITEAVDLFEFMRT--------------------KG-STISSPTAKT 369
T +A+D +AG + D FE M KG ++I+ K
Sbjct: 177 TLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMVKN 236
Query: 370 YA-----------IMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVC-LCGK 417
A ++I ++++E +L G M G Y +++ VC LC K
Sbjct: 237 TANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRK 296
Query: 418 ID------EAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPS 471
D E K L EM +G P + T+N + LC +++EEA+ L+GRM E C P
Sbjct: 297 KDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPD 356
Query: 472 VQTYNMLISMFFEMDDPDGAFETWQEMEKRGCN--LDTDTYCVMIEGLFNCNKTEEACSL 529
+TY +LI ++ E +M+ G L+ Y ++ L + E A S+
Sbjct: 357 AETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMSV 416
Query: 530 LEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMRKFYNPAMARRYAISQKRKSI 589
+ + G K K +D +G + A ++L+ Y A + A+S K +
Sbjct: 417 FKSMKANGCKPGIKTYDLL------MGKMCANNQLT-RANGLYKEAAKKGIAVSPKEYRV 469
Query: 590 SLR 592
R
Sbjct: 470 DPR 472
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 123/315 (39%), Gaps = 39/315 (12%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGL-YKKMRKIINTNAETYNILVFGWCRVRSPTRGMKL 316
P+ ++ +++++ L K V+ A L + ++ + YN ++ G C+ +KL
Sbjct: 437 PDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKL 496
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
L EM G P FT N + A+DL + MR G P K ++
Sbjct: 497 LGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGF---EPWIKHTTFLVKK 553
Query: 377 LAQNDRMEECFK---------LMGYMISS--------------------------GCLPD 401
L +N R + K +G+M++S G PD
Sbjct: 554 LCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPD 613
Query: 402 VTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYG 461
V Y +I+ +C + EA EM +KG P + TYN + C + + L
Sbjct: 614 VIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIV 673
Query: 462 RMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCN 521
RM E P V TY LI P A W EM+ + C + T+ +I+GL C
Sbjct: 674 RMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCG 733
Query: 522 KTEEACSLLEEVINK 536
+ EA E+ K
Sbjct: 734 WSGEALVYFREMEEK 748
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 131/320 (40%), Gaps = 49/320 (15%)
Query: 145 LAIPLSTPLVTGVLHRLRYDEKIAFRFFTWAGNQENYSHEPCAYNDMMDILSSTKYKVKQ 204
L+ L+T +V VL+ + +A+ FF WA QE Y ++ AYN M ILS +
Sbjct: 67 LSPELNTKVVETVLNGFKR-WGLAYLFFNWASKQEGYRNDMYAYNAMASILSRARQNASL 125
Query: 205 FRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEKYLTHVQKFAKKKRIRVKTQPEINAFN 264
+V D+L+ R P AF
Sbjct: 126 KALVVDVLNS--------------------------------------RCFMSP--GAFG 145
Query: 265 LLLDALCKCCLVEYAEGLYKKMRK--IINTNAETYNILVFGWCRVRSPTRGM--KLLEEM 320
+ L LV+ A ++ ++R+ + NA TYN L+ + S + + L+EM
Sbjct: 146 FFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEM 205
Query: 321 IQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQN 380
G D FT L YC G A+ +F + ++G I++V+ +
Sbjct: 206 RDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWL----DEHISTILVVSFCKW 261
Query: 381 DRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTY 440
++++ F+L+ + + TY +I G +ID+A++ E+M G DI Y
Sbjct: 262 GQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALY 321
Query: 441 NCFLRVLCDNKKSEEALKLY 460
+ + LC +K E AL LY
Sbjct: 322 DVLIGGLCKHKDLEMALSLY 341
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 108/283 (38%), Gaps = 4/283 (1%)
Query: 256 TQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGM 314
+P N + L + C A L KKMR + LV C
Sbjct: 505 VEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDAC 564
Query: 315 KLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMI 374
K L+++ G A+D K + ++LF + G P Y ++I
Sbjct: 565 KYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHC---PDVIAYHVLI 621
Query: 375 VTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYP 434
L + R E L M+S G P V TY +I+G C G+ID + M
Sbjct: 622 KALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKN 681
Query: 435 PDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFET 494
PD++TY + LC + + EA+ + M C P+ T+ LI + A
Sbjct: 682 PDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVY 741
Query: 495 WQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKG 537
++EME++ D+ Y ++ + + E+++KG
Sbjct: 742 FREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKG 784
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 118/292 (40%), Gaps = 24/292 (8%)
Query: 265 LLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKLLEEMIQL 323
+L+ K ++ A L++KMR++ +N + Y++L+ G C+ + + L E+ +
Sbjct: 288 VLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRS 347
Query: 324 GHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRM 383
G PD L ++ + ++ ++ G Y + +ND +
Sbjct: 348 GIPPDRGILGKLLCSFSEESELSRITEVI-----IGDIDKKSVMLLYKSLFEGFIRNDLV 402
Query: 384 EECFK----LMGYMISSGC--------------LPDVTTYKDIIEGVCLCGKIDEAYKFL 425
E + LMG S G LPD + +I + K+D A L
Sbjct: 403 HEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLL 462
Query: 426 EEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEM 485
++ G P + YN + +C +SEE+LKL G M + PS T N + E
Sbjct: 463 HDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAER 522
Query: 486 DDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKG 537
D GA + ++M G +++ L + +AC L++V +G
Sbjct: 523 CDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEG 574
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 85/199 (42%), Gaps = 4/199 (2%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKL 316
P++ A+++L+ ALCK C A+ L+ +M K + TYN ++ GWC+ RG+
Sbjct: 612 PDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSC 671
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
+ M + PD TY + + C +G +EA+ F + KG P T+ +I
Sbjct: 672 IVRMYEDEKNPDVITYTSLIHGLCASGRPSEAI--FRWNEMKGKD-CYPNRITFMALIQG 728
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
L + E M PD Y ++ I+ + EM +KG P
Sbjct: 729 LCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPV 788
Query: 437 IVTYNCFLRVLCDNKKSEE 455
V N L V +K E+
Sbjct: 789 SVDRNYMLAVNVTSKFVED 807
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 104/226 (46%), Gaps = 7/226 (3%)
Query: 342 AGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDR--MEECFKLMGYMISSGCL 399
AG++ EA +F+ +R G + P A TY ++ +++++ +E + M G
Sbjct: 154 AGLVDEASSVFDRVREMGLCV--PNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFH 211
Query: 400 PDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKL 459
D T +++ C GK + A E+ ++G+ + ++ + C + ++A +L
Sbjct: 212 FDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHIS-TILVVSFCKWGQVDKAFEL 270
Query: 460 YGRMIELRCIP-SVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLF 518
M+E R I + +TY +LI F + D AF+ +++M + G N D Y V+I GL
Sbjct: 271 I-EMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLC 329
Query: 519 NCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKL 564
E A SL E+ GI L S+ +L I ++
Sbjct: 330 KHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEV 375
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 96/449 (21%), Positives = 192/449 (42%), Gaps = 47/449 (10%)
Query: 151 TPLVTGVLHRLRYDEKIAFRFFTWAGNQ-ENYSHEPCAYNDMMDILSSTKYKVKQFRIVC 209
TP + + + + + A + F A + +Y H Y M+DIL + +V + + V
Sbjct: 11 TPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSN-RVLEMKYVI 69
Query: 210 DMLDYMKRKNKSTVPVEVLMTILRK--------------------YTEKYLTHVQKFAKK 249
+ + + K +V V+ T R ++ + T +Q+ K+
Sbjct: 70 ERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKE 129
Query: 250 KRIRV------------KTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAET 296
+ + I A NLL+ LC+ + A ++++M + + ++
Sbjct: 130 SELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDS 189
Query: 297 YNILVFGWCRVRSPTRGMKLLEEMI----QLGHRPDNFTYNTALDTYCKAGMITEAVDLF 352
Y IL+ G+C LL M Q G D Y LD C AG + +A+++
Sbjct: 190 YRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEIL 249
Query: 353 EFMRTKGSTISSPTAKTYAIMIVTL-AQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEG 411
+ KG + +P + I + ++ +E +L+ + G +P + +Y +
Sbjct: 250 GKILRKG--LKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATD 307
Query: 412 VCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGR-MIELRCIP 470
+ GK+ E + L M +KG+ P Y ++ LC K +EA+ + + M++ C+P
Sbjct: 308 LFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLP 367
Query: 471 SVQTYNMLISMFFEMDDPDGAFETWQEMEKR-GCNLDTDTYCVMIEGLFNCNKTEEACSL 529
+V YN+LI + A ++M K+ C + +TY +++GL + EA +
Sbjct: 368 TVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQV 427
Query: 530 LEEVINKGIKLPYKKFDSFLIQLSDLGDL 558
+EE++ IK + +++ + + L D+
Sbjct: 428 MEEML---IKSHFPGVETYHMMIKGLCDM 453
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 126/279 (45%), Gaps = 15/279 (5%)
Query: 251 RIRVKTQPE-INAFNLLLDALCKCCLVEYA-EGLYKKMRKIINTNAETYNILVFG-WCRV 307
RI K E I + +LLDALC V+ A E L K +RK + Y+ + G W
Sbjct: 216 RISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHW--- 272
Query: 308 RSPTRGM----KLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTIS 363
S + G+ +LL E + G P +Y+ + G + E ++ MR+KG
Sbjct: 273 ESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGF--- 329
Query: 364 SPTAKTYAIMIVTLAQNDRMEECFKLMGY-MISSGCLPDVTTYKDIIEGVCLCGKIDEAY 422
PT Y + L + +++E ++ M+ CLP V Y +I+G+C GK EA
Sbjct: 330 EPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAV 389
Query: 423 KFLEEMGNK-GYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISM 481
+L++M + + TY + LC + + EA ++ M+ P V+TY+M+I
Sbjct: 390 GYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKG 449
Query: 482 FFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNC 520
+MD A +EM + ++ + + E + C
Sbjct: 450 LCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVCFC 488
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 96/449 (21%), Positives = 192/449 (42%), Gaps = 47/449 (10%)
Query: 151 TPLVTGVLHRLRYDEKIAFRFFTWAGNQ-ENYSHEPCAYNDMMDILSSTKYKVKQFRIVC 209
TP + + + + + A + F A + +Y H Y M+DIL + +V + + V
Sbjct: 11 TPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSN-RVLEMKYVI 69
Query: 210 DMLDYMKRKNKSTVPVEVLMTILRK--------------------YTEKYLTHVQKFAKK 249
+ + + K +V V+ T R ++ + T +Q+ K+
Sbjct: 70 ERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKE 129
Query: 250 KRIRV------------KTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAET 296
+ + I A NLL+ LC+ + A ++++M + + ++
Sbjct: 130 SELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDS 189
Query: 297 YNILVFGWCRVRSPTRGMKLLEEMI----QLGHRPDNFTYNTALDTYCKAGMITEAVDLF 352
Y IL+ G+C LL M Q G D Y LD C AG + +A+++
Sbjct: 190 YRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEIL 249
Query: 353 EFMRTKGSTISSPTAKTYAIMIVTL-AQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEG 411
+ KG + +P + I + ++ +E +L+ + G +P + +Y +
Sbjct: 250 GKILRKG--LKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATD 307
Query: 412 VCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGR-MIELRCIP 470
+ GK+ E + L M +KG+ P Y ++ LC K +EA+ + + M++ C+P
Sbjct: 308 LFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLP 367
Query: 471 SVQTYNMLISMFFEMDDPDGAFETWQEMEKR-GCNLDTDTYCVMIEGLFNCNKTEEACSL 529
+V YN+LI + A ++M K+ C + +TY +++GL + EA +
Sbjct: 368 TVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQV 427
Query: 530 LEEVINKGIKLPYKKFDSFLIQLSDLGDL 558
+EE++ IK + +++ + + L D+
Sbjct: 428 MEEML---IKSHFPGVETYHMMIKGLCDM 453
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 126/279 (45%), Gaps = 15/279 (5%)
Query: 251 RIRVKTQPE-INAFNLLLDALCKCCLVEYA-EGLYKKMRKIINTNAETYNILVFG-WCRV 307
RI K E I + +LLDALC V+ A E L K +RK + Y+ + G W
Sbjct: 216 RISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHW--- 272
Query: 308 RSPTRGM----KLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTIS 363
S + G+ +LL E + G P +Y+ + G + E ++ MR+KG
Sbjct: 273 ESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGF--- 329
Query: 364 SPTAKTYAIMIVTLAQNDRMEECFKLMGY-MISSGCLPDVTTYKDIIEGVCLCGKIDEAY 422
PT Y + L + +++E ++ M+ CLP V Y +I+G+C GK EA
Sbjct: 330 EPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAV 389
Query: 423 KFLEEMGNK-GYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISM 481
+L++M + + TY + LC + + EA ++ M+ P V+TY+M+I
Sbjct: 390 GYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKG 449
Query: 482 FFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNC 520
+MD A +EM + ++ + + E + C
Sbjct: 450 LCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVCFC 488
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 133/289 (46%), Gaps = 7/289 (2%)
Query: 254 VKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM--RKIINTNAETYNILVFGWCRVRSPT 311
+K E+ +N+ + K +E +E L+ +M R I NA T+ ++ + P
Sbjct: 169 MKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNA-TFTTIISCARQNGVPK 227
Query: 312 RGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYA 371
R ++ E+M G PDN T +D Y +AG + A+ L++ RT+ I A T++
Sbjct: 228 RAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRID---AVTFS 284
Query: 372 IMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNK 431
+I + + C + M + G P++ Y +I+ + + +A +++
Sbjct: 285 TLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITN 344
Query: 432 GYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGA 491
G+ P+ TY +R + ++AL +Y M E +V YN L+SM + D A
Sbjct: 345 GFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEA 404
Query: 492 FETWQEMEK-RGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
FE +Q+M+ C+ D+ T+ +I + EA + L ++ G +
Sbjct: 405 FEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFE 453
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 100/258 (38%), Gaps = 38/258 (14%)
Query: 297 YNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMR 356
YN+ + + + + + KL +EM++ G +PDN T+ T + + G+ AV+ FE
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFE--- 234
Query: 357 TKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCG 416
M S GC PD T +I+ G
Sbjct: 235 -----------------------------------KMSSFGCEPDNVTMAAMIDAYGRAG 259
Query: 417 KIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYN 476
+D A + + + D VT++ +R+ + + L +Y M L P++ YN
Sbjct: 260 NVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYN 319
Query: 477 MLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINK 536
LI P A ++++ G + TY ++ ++A ++ E+ K
Sbjct: 320 RLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEK 379
Query: 537 GIKLPYKKFDSFLIQLSD 554
G+ L +++ L +D
Sbjct: 380 GLSLTVILYNTLLSMCAD 397
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 90/191 (47%), Gaps = 5/191 (2%)
Query: 282 LYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYC 340
+Y++M+ + + N YN L+ R + P + + +++I G P+ TY + Y
Sbjct: 302 IYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYG 361
Query: 341 KAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMIS-SGCL 399
+A +A+ ++ M+ KG ++ T Y ++ A N ++E F++ M + C
Sbjct: 362 RARYGDDALAIYREMKEKGLSL---TVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCD 418
Query: 400 PDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKL 459
PD T+ +I G++ EA L +M G+ P + ++ K+ ++ ++
Sbjct: 419 PDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRT 478
Query: 460 YGRMIELRCIP 470
+ +++EL P
Sbjct: 479 FDQVLELGITP 489
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 137/323 (42%), Gaps = 20/323 (6%)
Query: 217 RKNKSTVPVEVLMTILRKY--TEKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCC 274
R K + T++R Y + Y + + + K + VK P + +N L+D++ +
Sbjct: 272 RTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVK--PNLVIYNRLIDSMGRAK 329
Query: 275 LVEYAEGLYKKMRKIIN---TNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFT 331
A+ +YK + I N N TY LV + R R + + EM + G
Sbjct: 330 RPWQAKIIYKDL--ITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVIL 387
Query: 332 YNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMG 391
YNT L + EA ++F+ M K P + T++ +I A + R+ E +
Sbjct: 388 YNTLLSMCADNRYVDEAFEIFQDM--KNCETCDPDSWTFSSLITVYACSGRVSEAEAALL 445
Query: 392 YMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNK 451
M +G P + +I+ ++D+ + +++ G PD C L V+
Sbjct: 446 QMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDDRFCGCLLNVMTQT- 504
Query: 452 KSEEALKLYGRMIELRCIPSV-QTYNMLISMFFEMDDPDGAF--ETWQEMEKRGCNLDTD 508
SEE KL G + + + P + Q ML+ E + +G F E + ++ G ++
Sbjct: 505 PSEEIGKLIGCVEKAK--PKLGQVVKMLVE---EQNCEEGVFKKEASELIDSIGSDVKKA 559
Query: 509 TYCVMIEGLFNCNKTEEACSLLE 531
+I+ N NK E AC +L+
Sbjct: 560 YLNCLIDLCVNLNKLERACEILQ 582
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 118/266 (44%), Gaps = 17/266 (6%)
Query: 284 KKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQ-LGHRPDNFTYNTALDTYCKA 342
KKM I NA T+N ++ + R ++ EM + +G P+ ++YN ++ YC
Sbjct: 235 KKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCAR 294
Query: 343 GMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQN---DRMEECFKLMGYM-ISSGC 398
G+++EA ++E M+ +G Y MI L N + +E F+ MG I C
Sbjct: 295 GLMSEAEKVWEEMKVRGVVYD---IVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTC 351
Query: 399 LPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSE---E 455
L TY+ ++ G C G +D EM KG+ D +T + LCD++ + E
Sbjct: 352 L----TYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVE 407
Query: 456 ALKLYGRMI-ELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMI 514
A + + E PS Y +L+ E D A EM +G +TY I
Sbjct: 408 AADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFI 467
Query: 515 EGLFNCNKTEEACSLLEEVINKGIKL 540
+G + EE +LL + + +KL
Sbjct: 468 DG-YGIVGDEETSALLAIEMAESLKL 492
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/432 (22%), Positives = 181/432 (41%), Gaps = 70/432 (16%)
Query: 161 LRYDEKIAFRFFTWAGNQENYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNK 220
LR + ++ RFF + SH+ + + ++ ILS ++ K I+ L
Sbjct: 81 LRNNPHLSLRFFLFTRRYSLCSHDTHSCSTLIHILSRSRLKSHASEIIRLALRLAATDED 140
Query: 221 STVPVEVLMTILRKYTEKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCL-VEYA 279
++V ++++ Y R + P + D L K CL +
Sbjct: 141 EDRVLKVFRSLIKSYN----------------RCGSAP------FVFDLLIKSCLDSKEI 178
Query: 280 EGLYKKMRKI----INTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTA 335
+G MRK+ IN T N L+ R R + G K+ E+ L D+ + + A
Sbjct: 179 DGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVFGL----DDVSVDEA 234
Query: 336 LDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTL---AQNDRMEECFKLMGY 392
K P A T+ M+V+ + + +E ++ M
Sbjct: 235 KKMIGKI---------------------KPNATTFNSMMVSFYREGETEMVERIWREMEE 273
Query: 393 MISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKK 452
+ GC P+V +Y ++E C G + EA K EEM +G DIV YN + LC N +
Sbjct: 274 EV--GCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFE 331
Query: 453 SEEALKLYGRM----IELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTD 508
+A +L+ M IE C+ TY L++ + + D D ++EM+++G D
Sbjct: 332 VVKAKELFRDMGLKGIECTCL----TYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGL 387
Query: 509 TYCVMIEGL---FNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQ-LSDLGDL-HAIHK 563
T ++EGL + + EA ++++ + + + P + L++ L + G + A++
Sbjct: 388 TIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNI 447
Query: 564 LSDHMRKFYNPA 575
++ + K + P+
Sbjct: 448 QAEMVGKGFKPS 459
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 93/212 (43%), Gaps = 2/212 (0%)
Query: 235 YTEKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTN 293
Y E V++ ++ V P + ++N+L++A C L+ AE ++++M+ + + +
Sbjct: 256 YREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYD 315
Query: 294 AETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFE 353
YN ++ G C + +L +M G TY ++ YCKAG + + ++
Sbjct: 316 IVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYR 375
Query: 354 FMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCL-PDVTTYKDIIEGV 412
M+ KG T + + R+ E ++ + P Y+ +++ +
Sbjct: 376 EMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRL 435
Query: 413 CLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFL 444
C GK+D A EM KG+ P TY F+
Sbjct: 436 CEDGKMDRALNIQAEMVGKGFKPSQETYRAFI 467
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 97/214 (45%), Gaps = 26/214 (12%)
Query: 326 RPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEE 385
+PD + YNT ++ C+ G +A L + M+ G P TY I+I + +
Sbjct: 197 KPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYP-PDTYTYTILISSYCR------ 249
Query: 386 CFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLR 445
Y + +GC + ++ EA + EM +G+ PD+VTYNC +
Sbjct: 250 ------YGMQTGCRKAIRR------------RMWEANRMFREMLFRGFVPDVVTYNCLID 291
Query: 446 VLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNL 505
C + AL+L+ M C+P+ TYN I + ++ +GA E + M+K G +
Sbjct: 292 GCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGV 351
Query: 506 -DTDTYCVMIEGLFNCNKTEEACSLLEEVINKGI 538
+ TY +I L + EA L+ E++ G+
Sbjct: 352 PGSSTYTPLIHALVETRRAAEARDLVVEMVEAGL 385
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 130/313 (41%), Gaps = 46/313 (14%)
Query: 168 AFRFFTWAGNQENYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRK--NKSTVPV 225
A FF W + H DM +L+ K F+ + D L + R+ K+ V
Sbjct: 110 ALEFFFWIETHFGFDHNEITCRDMACLLA----KGNDFKGLWDFLRQVSRRENGKNVVTT 165
Query: 226 EVLMTILRKYTEKYLTH--VQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLY 283
+ +++ E+ + F + K K P++ A+N +++ALC+ G +
Sbjct: 166 ASITCLMKCLGEEGFVKEALATFYRMKEYHCK--PDVYAYNTIINALCRV-------GNF 216
Query: 284 KKMRKIINT----------NAETYNILVFGWCRV-----------RSPTRGMKLLEEMIQ 322
KK R +++ + TY IL+ +CR R ++ EM+
Sbjct: 217 KKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLF 276
Query: 323 LGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDR 382
G PD TYN +D CK I A++LFE M+TKG P TY I + +
Sbjct: 277 RGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCV---PNQVTYNSFIRYYSVTNE 333
Query: 383 MEECFKLMGYMISSG-CLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYN 441
+E ++M M G +P +TY +I + + EA + EM G P TY
Sbjct: 334 IEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTY- 392
Query: 442 CFLRVLCDNKKSE 454
+++CD SE
Sbjct: 393 ---KLVCDALSSE 402
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 150/355 (42%), Gaps = 10/355 (2%)
Query: 220 KSTVPVEVLM--TILRK-YTEKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLV 276
KS VP++ + T++ T +L+ + KK + P+ +N+LL +
Sbjct: 333 KSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEK-GISPDTKTYNILLSLHADAGDI 391
Query: 277 EYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTA 335
E A Y+K+RK+ + + T+ ++ C+ + ++ EM + R D +
Sbjct: 392 EAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVI 451
Query: 336 LDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLM-GYMI 394
+ Y G++ +A LFE R + + S T T A +I A+ E + G
Sbjct: 452 MQMYVNEGLVVQAKALFE--RFQLDCVLSST--TLAAVIDVYAEKGLWVEAETVFYGKRN 507
Query: 395 SSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSE 454
SG DV Y +I+ ++A + M N+G PD TYN ++L +
Sbjct: 508 MSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVD 567
Query: 455 EALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMI 514
EA ++ M++ C P +TY +I+ + + A + ++ MEK G + Y +I
Sbjct: 568 EAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLI 627
Query: 515 EGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMR 569
G EEA + G++ + S + S +G L ++ D M+
Sbjct: 628 NGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMK 682
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 139/332 (41%), Gaps = 7/332 (2%)
Query: 228 LMTILRKYTEKYL-THVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM 286
L ++ Y EK L + KR + ++ +N+++ A K L E A L+K M
Sbjct: 482 LAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGM 541
Query: 287 RKIINTNAE-TYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMI 345
+ E TYN L V ++L EM+ G +P TY + +Y + G++
Sbjct: 542 KNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLL 601
Query: 346 TEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTY 405
++AVDL+E M G P Y +I A++ +EE + M G +
Sbjct: 602 SDAVDLYEAMEKTGV---KPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVL 658
Query: 406 KDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIE 465
+I+ G ++EA + ++M + PD+ N L + D EA ++ + E
Sbjct: 659 TSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALRE 718
Query: 466 LRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEE 525
+ V ++ ++ ++ M D A E +EM + G D ++ ++ + E
Sbjct: 719 -KGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSE 777
Query: 526 ACSLLEE-VINKGIKLPYKKFDSFLIQLSDLG 556
C L E ++ + + L + F + L G
Sbjct: 778 CCELFHEMLVERKLLLDWGTFKTLFTLLKKGG 809
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/353 (20%), Positives = 142/353 (40%), Gaps = 12/353 (3%)
Query: 188 YNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEKYLTHVQKFA 247
+ ++ IL K + ++ +M R ++ +VPV I++ Y + L VQ A
Sbjct: 413 HRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPV-----IMQMYVNEGLV-VQAKA 466
Query: 248 KKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAET--YNILVFGWC 305
+R ++ ++D + L AE ++ R + + YN+++ +
Sbjct: 467 LFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYG 526
Query: 306 RVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSP 365
+ + + + L + M G PD TYN+ ++ EA + M G P
Sbjct: 527 KAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGC---KP 583
Query: 366 TAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFL 425
KTYA MI + + + + L M +G P+ Y +I G G ++EA ++
Sbjct: 584 GCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYF 643
Query: 426 EEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEM 485
M G + + ++ EEA ++Y +M + P V N ++S+ ++
Sbjct: 644 RMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADL 703
Query: 486 DDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGI 538
A + + ++G D ++ M+ +EA + EE+ G+
Sbjct: 704 GIVSEAESIFNALREKG-TCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGL 755
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 125/308 (40%), Gaps = 32/308 (10%)
Query: 258 PEINAFNLLLDALCKC--------CLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRS 309
P + +N++L AL + C +E A ++ TN TY +LV + +
Sbjct: 143 PNVIHYNIVLRALGRAGKWDELRLCWIEMAH------NGVLPTN-NTYGMLVDVYGKAGL 195
Query: 310 PTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEA---------------VDLFEF 354
+ ++ M Q H PD T T + + +G A +D +
Sbjct: 196 VKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVDLDLDSIDD 255
Query: 355 MRTKGSTISSPTAKTYAIM-IVTLAQNDRMEECFKLMGYMISSGCLPDVT-TYKDIIEGV 412
GS S K + M + + + +E+ SS P +T T+ +I+
Sbjct: 256 FPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLY 315
Query: 413 CLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSV 472
G++++A EM G P D VT+N + + EA L +M E P
Sbjct: 316 GKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDT 375
Query: 473 QTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEE 532
+TYN+L+S+ + D + A E ++++ K G DT T+ ++ L E +++ E
Sbjct: 376 KTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAE 435
Query: 533 VINKGIKL 540
+ I++
Sbjct: 436 MDRNSIRI 443
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/266 (19%), Positives = 105/266 (39%), Gaps = 19/266 (7%)
Query: 168 AFRFFTWAGNQENYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKST----V 223
A F NQ + E C YN + +L+ + RI+ +MLD + T +
Sbjct: 534 ALSLFKGMKNQGTWPDE-CTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMI 592
Query: 224 PVEVLMTILRKYTEKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLY 283
V + +L + Y + + +P + L++ + +VE A +
Sbjct: 593 ASYVRLGLLSDAVDLY---------EAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYF 643
Query: 284 KKMRK-IINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKA 342
+ M + + +N L+ + +V ++ ++M PD N+ L
Sbjct: 644 RMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADL 703
Query: 343 GMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDV 402
G+++EA +F +R KG+ ++A M+ ++E ++ M SG L D
Sbjct: 704 GIVSEAESIFNALREKGTC----DVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDC 759
Query: 403 TTYKDIIEGVCLCGKIDEAYKFLEEM 428
T++ ++ G++ E + EM
Sbjct: 760 TSFNQVMACYAADGQLSECCELFHEM 785
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 102/225 (45%), Gaps = 6/225 (2%)
Query: 296 TYNILVFGWCRV--RSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFE 353
T+ IL+ CR S + ++L M+ G PD T + A+ + C+ G + EA DL +
Sbjct: 124 TFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMK 183
Query: 354 FMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISS-GCLPDVTTYKDIIEGV 412
+ K S P TY ++ L + + ++ + M PD+ ++ +I+ V
Sbjct: 184 ELTEKHS---PPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNV 240
Query: 413 CLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSV 472
C + EA + ++GN G+ PD YN ++ C K EA+ +Y +M E P
Sbjct: 241 CNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQ 300
Query: 473 QTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGL 517
TYN LI + + A + M G DT TY ++ G+
Sbjct: 301 ITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGM 345
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 79/163 (48%), Gaps = 5/163 (3%)
Query: 256 TQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAE--TYNILVFGWCRVRSPTRG 313
+ P+ +N LL LCKC + +MR + + ++ IL+ C ++
Sbjct: 190 SPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREA 249
Query: 314 MKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIM 373
M L+ ++ G +PD F YNT + +C +EAV +++ M+ +G P TY +
Sbjct: 250 MYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGV---EPDQITYNTL 306
Query: 374 IVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCG 416
I L++ R+EE + M+ +G PD TY ++ G+C G
Sbjct: 307 IFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 103/229 (44%), Gaps = 8/229 (3%)
Query: 314 MKLLEEMI--QLGHRPDNFTYNTALDTYCKA--GMITEAVDLFEFMRTKGSTISSPTAKT 369
+KL + ++ Q RP T+ L C+A I+ + M G P T
Sbjct: 105 VKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGL---EPDQVT 161
Query: 370 YAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMG 429
I + +L + R++E LM + PD TY +++ +C C + Y+F++EM
Sbjct: 162 TDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMR 221
Query: 430 NK-GYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDP 488
+ PD+V++ + +C++K EA+ L ++ P YN ++ F +
Sbjct: 222 DDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKG 281
Query: 489 DGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKG 537
A +++M++ G D TY +I GL + EEA L+ +++ G
Sbjct: 282 SEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAG 330
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 127/295 (43%), Gaps = 4/295 (1%)
Query: 261 NAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKLLEE 319
NA+N ++ L K +E A +KK ++ + +TYN L+ + P + ++ E
Sbjct: 244 NAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYES 303
Query: 320 MIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQ 379
M + D TY + + K+G + A LF+ M+ + P+ ++ ++ ++ +
Sbjct: 304 MEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKL---RPSFSVFSSLVDSMGK 360
Query: 380 NDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVT 439
R++ K+ M G P T + +I+ GK+D A + +EM G+ P+
Sbjct: 361 AGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGL 420
Query: 440 YNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEME 499
Y + + K E A+ ++ M + +P+ TY+ L+ M D A + + M
Sbjct: 421 YTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMT 480
Query: 500 KRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSD 554
G +Y ++ L N + A +L E+ G + D +I + D
Sbjct: 481 NAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLMIYIKD 535
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 117/282 (41%), Gaps = 13/282 (4%)
Query: 295 ETYNILVFGWCRVRSPTRGMKLLEEMIQ--LGHRPDNF-TYNTALDTYCKAGMITEAVDL 351
E Y +L G + R L EEM+Q H +F YN + KA + A
Sbjct: 206 ECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCC 265
Query: 352 FEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEG 411
F+ + G I + +TY +++ + F++ M + L D +TY+ II
Sbjct: 266 FKKAQESGCKIDT---QTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPS 322
Query: 412 VCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPS 471
+ G++D A+K ++M + P ++ + + + + ++K+Y M PS
Sbjct: 323 LAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPS 382
Query: 472 VQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLE 531
+ LI + + D A W EM+K G + Y ++IE K E A ++ +
Sbjct: 383 ATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFK 442
Query: 532 EVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMRKFYN 573
++ G LP S L++ +HA D K YN
Sbjct: 443 DMEKAGF-LPTPSTYSCLLE------MHAGSGQVDSAMKIYN 477
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 105/220 (47%), Gaps = 6/220 (2%)
Query: 328 DNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECF 387
+ F YN AG I A+++ M G P++K++ ++ L +E
Sbjct: 131 EEFFYNLMRIYGNLAGRINRAIEILFGMPDFGCW---PSSKSFNFILNLLVSAKLFDEIH 187
Query: 388 KLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVL 447
K+ G D +I+G+C G ++ A + L+E + P+++T++ +R
Sbjct: 188 KIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGF 247
Query: 448 CDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDT 507
C+ K EEA KL RM + R P T+N+LIS + + + + M+ +GC +
Sbjct: 248 CNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNP 307
Query: 508 DTYCVMIEGLFNCNKTEEACSLLEEVINKGIK---LPYKK 544
TY ++ GL + + EA ++ ++I+ G++ L YKK
Sbjct: 308 GTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKK 347
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 110/255 (43%), Gaps = 15/255 (5%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKL 316
P +FN +L+ L L + ++ K+ + +A NIL+ G C + ++L
Sbjct: 165 PSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQL 224
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
L+E Q RP+ T++ + +C G EA L E M + P T+ I+I
Sbjct: 225 LDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERI---EPDTITFNILISG 281
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
L + R+EE L+ M GC P+ TY++++ G+ + EA + + +M + G P
Sbjct: 282 LRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPS 341
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQ 496
++Y + LC+ K E + +M+ +P + ++ ++ D
Sbjct: 342 FLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQCVVSKNNDDSQ----- 396
Query: 497 EMEKRGCNLDTDTYC 511
NLD T C
Sbjct: 397 ------ANLDRITAC 405
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 95/227 (41%), Gaps = 3/227 (1%)
Query: 311 TRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
R +++L M G P + ++N L+ A + E +F G I A
Sbjct: 149 NRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEID---ACCL 205
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGN 430
I+I L ++ +E +L+ P+V T+ +I G C GK +EA+K LE M
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 431 KGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDG 490
+ PD +T+N + L + EE + L RM C P+ TY ++ +
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE 325
Query: 491 AFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKG 537
A E +M G +Y M+ GL E +L +++N G
Sbjct: 326 AKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHG 372
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 157/392 (40%), Gaps = 51/392 (13%)
Query: 184 EPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEKYLTHV 243
+P + +++ ++ + + FR +C DY P V + IL +
Sbjct: 79 DPLFFGELLKSQNNVLFSLWFFRWLCSNYDY--------TPGPVSLNIL--FGALLDGKA 128
Query: 244 QKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVF 302
K AK +PE + L + LVE A +Y ++ + I+++ T N ++
Sbjct: 129 VKAAKSFLDTTGFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLL 188
Query: 303 GWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTI 362
G + R R +L +EM++ D+ + C G ++E +L + +G
Sbjct: 189 GCLKARKLDRFWELHKEMVE--SEFDSERIRCLIRALCDGGDVSEGYELLKQGLKQGL-- 244
Query: 363 SSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAY 422
P YA +I + +++ MI+ P + Y+ II+G+C+ K EAY
Sbjct: 245 -DPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAY 303
Query: 423 KFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMF 482
+ + +KGY PD V Y +R C+ A KL+ MI+ P+ YN++I
Sbjct: 304 CIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGH 363
Query: 483 FEMDD-----------------------------------PDGAFETWQEMEKRGCNLDT 507
F+ + D AFE ++ M + G +
Sbjct: 364 FKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNA 423
Query: 508 DTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
TY +I+G NK E+ L +E+ G+K
Sbjct: 424 ITYNALIKGFCKENKVEKGLKLYKELKALGLK 455
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 119/276 (43%), Gaps = 4/276 (1%)
Query: 243 VQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLV-EYAEGLYKKMRKIINTNAETYNILV 301
+ +F + + V+++ + L+ ALC V E E L + +++ ++ Y L+
Sbjct: 196 LDRFWELHKEMVESEFDSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLI 255
Query: 302 FGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGST 361
G+C + + ++L MI H P + Y + C EA +F+ ++ KG
Sbjct: 256 SGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGY- 314
Query: 362 ISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEA 421
+P Y MI + + KL MI G P+ Y +I G G+I
Sbjct: 315 --APDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLV 372
Query: 422 YKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISM 481
F EM GY +++ N ++ C + KS+EA +++ M E P+ TYN LI
Sbjct: 373 EAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKG 432
Query: 482 FFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGL 517
F + + + + ++E++ G Y ++ L
Sbjct: 433 FCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNL 468
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 96/210 (45%), Gaps = 6/210 (2%)
Query: 324 GHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRM 383
G + D+FTY T LD + +AG I +F M+ KG I + T Y +I ++ + +
Sbjct: 117 GFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVT---YTSLIHWVSSSGDV 173
Query: 384 EECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCF 443
+ +L M +GC P V +Y ++ + G+++EA + +EM P+ TY
Sbjct: 174 DGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVL 233
Query: 444 LRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGC 503
+ L K EEAL ++ +M E+ P N+LI+ + + M++ G
Sbjct: 234 MEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGV 293
Query: 504 NLDTDTYCVMIEGLFNCNKTEEACSLLEEV 533
L Y + +E L E+ LL EV
Sbjct: 294 VL---RYPIFVEALETLKAAGESDDLLREV 320
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 84/189 (44%)
Query: 369 TYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEM 428
TY M+ + R++ + + M G L D TY +I V G +D A + EEM
Sbjct: 124 TYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEM 183
Query: 429 GNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDP 488
+ G P +V+Y ++++L + + EEA ++Y M+ R P+ TY +L+
Sbjct: 184 RDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKC 243
Query: 489 DGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSF 548
+ A + + +M++ G D ++I +T +L + G+ L Y F
Sbjct: 244 EEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGVVLRYPIFVEA 303
Query: 549 LIQLSDLGD 557
L L G+
Sbjct: 304 LETLKAAGE 312
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 65/143 (45%)
Query: 397 GCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEA 456
G D TY +++ G+I Y M KG D VTY + + + + A
Sbjct: 117 GFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGA 176
Query: 457 LKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEG 516
++L+ M + C P+V +Y + M F + A E ++EM + + + TY V++E
Sbjct: 177 MRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEY 236
Query: 517 LFNCNKTEEACSLLEEVINKGIK 539
L K EEA + ++ G++
Sbjct: 237 LVATGKCEEALDIFFKMQEIGVQ 259
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 46/108 (42%)
Query: 431 KGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDG 490
KG+ D TY L + + + + ++ M E + TY LI D DG
Sbjct: 116 KGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDG 175
Query: 491 AFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGI 538
A W+EM GC +Y ++ LF + EEA + +E++ +
Sbjct: 176 AMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRV 223
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 99/220 (45%), Gaps = 5/220 (2%)
Query: 262 AFNLLLDALCKCCLVEYAEGLYKKM--RKIINTNAETYNILVFGWCRVRSPTRGMKLLEE 319
+FN LL A + E L+ ++ + I + +YN L+ C S + LL+E
Sbjct: 146 SFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDE 205
Query: 320 MIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQ 379
+ G +PD T+NT L + G +++ M K I +TY ++ LA
Sbjct: 206 IENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAID---IRTYNARLLGLAN 262
Query: 380 NDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVT 439
+ +E L G + +SG PDV ++ +I G GK+DEA + +E+ GY PD T
Sbjct: 263 EAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKAT 322
Query: 440 YNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLI 479
+ L +C E A++L+ R + T L+
Sbjct: 323 FALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLV 362
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 103/246 (41%), Gaps = 9/246 (3%)
Query: 339 YCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGC 398
Y KAGM A +FE M + S + + D +EE F + +S
Sbjct: 119 YGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLS--I 176
Query: 399 LPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALK 458
PD+ +Y +I+ +C + EA L+E+ NKG PDIVT+N L + E +
Sbjct: 177 KPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEE 236
Query: 459 LYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLF 518
++ +M+E ++TYN + + E++ G D ++ MI G
Sbjct: 237 IWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSI 296
Query: 519 NCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMRKFYNPAMAR 578
N K +EA + +E++ G + F L + GD + +L + ++
Sbjct: 297 NEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIEL-------FKETFSK 349
Query: 579 RYAISQ 584
RY + Q
Sbjct: 350 RYLVGQ 355
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 95/226 (42%), Gaps = 6/226 (2%)
Query: 313 GMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFE--FMRTKGSTISSPTAKTY 370
K+ EEM + ++N L Y +++ D+ E F G P +Y
Sbjct: 128 AQKVFEEMPNRDCKRSVLSFNALLSAY----RLSKKFDVVEELFNELPGKLSIKPDIVSY 183
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGN 430
+I L + D + E L+ + + G PD+ T+ ++ L G+ + + +M
Sbjct: 184 NTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVE 243
Query: 431 KGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDG 490
K DI TYN L L + KS+E + L+G + P V ++N +I D
Sbjct: 244 KNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDE 303
Query: 491 AFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINK 536
A ++E+ K G D T+ +++ + E A L +E +K
Sbjct: 304 AEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSK 349
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 93/213 (43%), Gaps = 7/213 (3%)
Query: 322 QLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQND 381
+L +PD +YNT + C+ + EAV L + + KG P T+ ++++
Sbjct: 173 KLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGL---KPDIVTFNTLLLSSYLKG 229
Query: 382 RMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYN 441
+ E ++ M+ D+ TY + G+ K E E+ G PD+ ++N
Sbjct: 230 QFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFN 289
Query: 442 CFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKR 501
+R + K +EA Y +++ P T+ +L+ + D + A E ++E +
Sbjct: 290 AMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSK 349
Query: 502 GCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVI 534
+ T +++ L +K EEA EE++
Sbjct: 350 RYLVGQTTLQQLVDELVKGSKREEA----EEIV 378
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 108/233 (46%), Gaps = 10/233 (4%)
Query: 313 GMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAI 372
++ L +M +LG P TYNT + Y AG + +L + M +G+ P +T+ +
Sbjct: 134 AVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNV 193
Query: 373 MIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGK---IDEAYKFLEEMG 429
++ + ++EE ++++ M G PD TY I C K + + +E+M
Sbjct: 194 LVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTI--ATCYVQKGETVRAESEVVEKMV 251
Query: 430 NK-GYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDP 488
K P+ T + C + + L+ RM E+R ++ +N LI+ F E+ D
Sbjct: 252 MKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDR 311
Query: 489 DGAFETWQEMEKRGCNLDTD--TYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
DG E M++ CN+ D TY ++ + E+A + +E++ G+K
Sbjct: 312 DGIDEVLTLMKE--CNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVK 362
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 128/281 (45%), Gaps = 15/281 (5%)
Query: 263 FNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKLLEEMI 321
FN +++A + +E A KM+++ +N TYN L+ G+ P R +LL+ M+
Sbjct: 118 FNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLML 177
Query: 322 QLGH---RPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLA 378
+ G+ P+ T+N + +CK + EA ++ + M G + T T A V
Sbjct: 178 EEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKG 237
Query: 379 QNDRME-ECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDI 437
+ R E E + M ++ P+ T ++ G C G++ + +F+ M ++
Sbjct: 238 ETVRAESEVVEKM--VMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANL 295
Query: 438 VTYNC----FLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFE 493
V +N F+ V+ D +E L L M E V TY+ +++ + + A +
Sbjct: 296 VVFNSLINGFVEVM-DRDGIDEVLTL---MKECNVKADVITYSTVMNAWSSAGYMEKAAQ 351
Query: 494 TWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVI 534
++EM K G D Y ++ +G + ++A LLE +I
Sbjct: 352 VFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI 392
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 128/316 (40%), Gaps = 52/316 (16%)
Query: 254 VKTQPEINAFNLLLDALCKCCLVEYAEGLYKK---------------------------- 285
V P I FN+L+ A CK VE A + KK
Sbjct: 182 VDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVR 241
Query: 286 ----------MRKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTA 335
M++ N T I+V G+CR G++ + M ++ + +N+
Sbjct: 242 AESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSL 301
Query: 336 LDTYCKA---GMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGY 392
++ + + I E + L + K I TY+ ++ + ME+ ++
Sbjct: 302 INGFVEVMDRDGIDEVLTLMKECNVKADVI------TYSTVMNAWSSAGYMEKAAQVFKE 355
Query: 393 MISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKK 452
M+ +G PD Y + +G + +A + LE + + P++V + + C N
Sbjct: 356 MVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESR-PNVVIFTTVISGWCSNGS 414
Query: 453 SEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNL--DTDTY 510
++A++++ +M + P+++T+ L+ + E+ P A E Q M RGC + + T+
Sbjct: 415 MDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMM--RGCGVKPENSTF 472
Query: 511 CVMIEGLFNCNKTEEA 526
++ E T+E+
Sbjct: 473 LLLAEAWRVAGLTDES 488
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 12/184 (6%)
Query: 310 PTRGMKLLEEMIQLGHRPDNFTYNT---ALDTYCKAGMITEAVDLFEFMRTKGSTISSPT 366
P + + + + GHRP +Y T A+ + G I+ V E TK +I
Sbjct: 61 PHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSI---- 116
Query: 367 AKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLE 426
+ +I +++ ME+ + + M G P +TY +I+G + GK + + + L+
Sbjct: 117 --FFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLD 174
Query: 427 ---EMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFF 483
E GN P+I T+N ++ C KK EEA ++ +M E P TYN + + +
Sbjct: 175 LMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYV 234
Query: 484 EMDD 487
+ +
Sbjct: 235 QKGE 238
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 105/229 (45%), Gaps = 2/229 (0%)
Query: 336 LDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMIS 395
++ Y + GM A +F+ M + ++ + V + D +E FK + +S
Sbjct: 113 INLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLS 172
Query: 396 SGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEE 455
PDV +Y +I+G+C G EA ++E+ NKG PD +T+N L K EE
Sbjct: 173 --IEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEE 230
Query: 456 ALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIE 515
+++ RM+E +++YN + + + + +++ D T+ MI+
Sbjct: 231 GEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIK 290
Query: 516 GLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKL 564
G + K +EA + +E+ G + F+S L + GDL + ++L
Sbjct: 291 GFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYEL 339
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 5/200 (2%)
Query: 262 AFNLLLDALCKCCLVEYAEGLYKKM--RKIINTNAETYNILVFGWCRVRSPTRGMKLLEE 319
+FN LL+A + EG++K++ + I + +YN L+ G C S T + L++E
Sbjct: 143 SFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDE 202
Query: 320 MIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQ 379
+ G +PD+ T+N L G E ++ M K ++Y ++ LA
Sbjct: 203 IENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKN---VKRDIRSYNARLLGLAM 259
Query: 380 NDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVT 439
++ EE L + + PDV T+ +I+G GK+DEA + +E+ G P
Sbjct: 260 ENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFV 319
Query: 440 YNCFLRVLCDNKKSEEALKL 459
+N L +C E A +L
Sbjct: 320 FNSLLPAICKAGDLESAYEL 339
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 92/210 (43%), Gaps = 3/210 (1%)
Query: 322 QLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQND 381
+L PD +YNT + C G TEAV L + + KG P T+ I++
Sbjct: 170 KLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGL---KPDHITFNILLHESYTKG 226
Query: 382 RMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYN 441
+ EE ++ M+ D+ +Y + G+ + K +E +++ PD+ T+
Sbjct: 227 KFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFT 286
Query: 442 CFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKR 501
++ K +EA+ Y + + C P +N L+ + D + A+E +E+ +
Sbjct: 287 AMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAK 346
Query: 502 GCNLDTDTYCVMIEGLFNCNKTEEACSLLE 531
+D +++ L +K +EA ++E
Sbjct: 347 RLLVDEAVLQEVVDALVKGSKQDEAEEIVE 376
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 105/263 (39%), Gaps = 7/263 (2%)
Query: 277 EYAEGLYKKMRKIINTNAETYNILVFG-WCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTA 335
E+ E + ++ K N + E + + + RV K+ +EM + + ++N
Sbjct: 88 EWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNAL 147
Query: 336 LDTYCKAGMITEAVDLFE--FMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYM 393
L+ A + ++ DL E F G P +Y +I L E L+ +
Sbjct: 148 LN----ACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEI 203
Query: 394 ISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKS 453
+ G PD T+ ++ GK +E + M K DI +YN L L KS
Sbjct: 204 ENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKS 263
Query: 454 EEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVM 513
EE + L+ ++ P V T+ +I F D A ++E+EK GC + +
Sbjct: 264 EEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSL 323
Query: 514 IEGLFNCNKTEEACSLLEEVINK 536
+ + E A L +E+ K
Sbjct: 324 LPAICKAGDLESAYELCKEIFAK 346
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 104/220 (47%), Gaps = 19/220 (8%)
Query: 260 INAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKLLE 318
I AF +L +L K LV+ AE L+ +M K + + YN+ + + SP R +L+E
Sbjct: 209 IIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYNVRLMNAAK-ESPERVKELME 267
Query: 319 EMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLA 378
EM +G +PD +YN + YC GM++EA ++E + P A T+ +I L
Sbjct: 268 EMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYE-------GLEQPNAATFRTLIFHLC 320
Query: 379 QNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIV 438
N ++ + +PD T K + EG+ ++++A + + + K +PP +V
Sbjct: 321 INGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLVKNNRMEDA-RGVARIVKKKFPPRLV 379
Query: 439 TYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNML 478
T + KK EE L LY + S QT +L
Sbjct: 380 T---------EWKKLEEKLGLYSKGNAAAVSSSSQTREVL 410
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 129/300 (43%), Gaps = 16/300 (5%)
Query: 180 NYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEV-LMTILRKYTEK 238
N S P + M++ K ++F + +++ KN + E L T++R Y
Sbjct: 58 NNSTSPLSSRYAMELTVQRLAKSQRFSDIEALIE--SHKNNPKIKTETFLSTLIRSYGRA 115
Query: 239 YL-THVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINT---NA 294
+ H K ++ ++ T + +FN LL A L E L+ + + N +
Sbjct: 116 SMFDHAMKMFEEMD-KLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDK 174
Query: 295 ETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEF 354
+Y +L+ +C P + M+++ +M G + T L + K G++ EA L+
Sbjct: 175 ISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIE 234
Query: 355 MRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCL 414
M KG + + Y + ++ A+ + E +LM M S G PD +Y ++ C+
Sbjct: 235 MVNKGCDLDN---TVYNVRLMNAAK-ESPERVKELMEEMSSVGLKPDTVSYNYLMTAYCV 290
Query: 415 CGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQT 474
G + EA K E + P+ T+ + LC N ++ L ++ + + IP +T
Sbjct: 291 KGMMSEAKKVYEGLEQ----PNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFKT 346
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 78/182 (42%), Gaps = 4/182 (2%)
Query: 363 SSPTAKTYA--IMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDE 420
+SP + YA + + LA++ R + L+ ++ + T +I D
Sbjct: 61 TSPLSSRYAMELTVQRLAKSQRFSDIEALIESHKNNPKIKTETFLSTLIRSYGRASMFDH 120
Query: 421 AYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIEL--RCIPSVQTYNML 478
A K EEM G P +V++N L + E +L+ + P +Y ML
Sbjct: 121 AMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGML 180
Query: 479 ISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGI 538
I + + P+ A E ++ME +G + + ++ L+ +EA SL E++NKG
Sbjct: 181 IKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGC 240
Query: 539 KL 540
L
Sbjct: 241 DL 242
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 6/180 (3%)
Query: 333 NTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGY 392
+T + +Y +A M A+ +FE M G+ T ++ ++ +D E +L
Sbjct: 106 STLIRSYGRASMFDHAMKMFEEMDKLGT---PRTVVSFNALLAACLHSDLFERVPQLFDE 162
Query: 393 MIS--SGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDN 450
+ PD +Y +I+ C GK ++A + + +M KG I+ + L L N
Sbjct: 163 FPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKN 222
Query: 451 KKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTY 510
+EA L+ M+ C YN+ + M + P+ E +EM G DT +Y
Sbjct: 223 GLVDEAESLWIEMVNKGCDLDNTVYNVRL-MNAAKESPERVKELMEEMSSVGLKPDTVSY 281
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 103/457 (22%), Positives = 170/457 (37%), Gaps = 69/457 (15%)
Query: 142 LDQLAIPLSTPLVTGVLHRLRYDEKIAFRFFTWAGNQENYSHEPCAYNDMMDILSSTKYK 201
L L + L+ V VL RYD +FF WA Q + H ++ + IL K
Sbjct: 103 LSNLRLRLTEKFVLDVLSHTRYDILCCLKFFDWAARQPGFHHTRATFHAIFKILRGAK-- 160
Query: 202 VKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEKYLTHVQKFAKKKRIRVKTQPEIN 261
+V M+D++ R +V E LR V +A R + Q N
Sbjct: 161 -----LVTLMIDFLDR----SVGFESCRHSLRLCD----ALVVGYAVAGRTDIALQHFGN 207
Query: 262 -----------AFNLLLDALC--KC-----------------CLVEYAEGLYKKMRKIIN 291
+++LL+AL KC C V ++ + K ++
Sbjct: 208 MRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISVRGFVCAVTHSILVKKFCKQGKL 267
Query: 292 TNAETY----------------NILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTA 335
AE Y ILV C R KLL+E+ +G + YN
Sbjct: 268 DEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIW 327
Query: 336 LDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKT--YAIMIVTLAQNDRMEECFKLMGYM 393
+ KAG + D + K S + + Y M+ L + + ++ + ++ M
Sbjct: 328 IRALIKAGFLNNPADFLQ----KISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEM 383
Query: 394 ISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKS 453
+ G P+ T + C G +DEA + G+ P ++YN + LC N+
Sbjct: 384 MVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESV 443
Query: 454 EEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVM 513
E+A + I+ +T++ L + PD A E +R C +
Sbjct: 444 EQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKI 503
Query: 514 IEGLFNCNKTEEACSLLEEVINK-GIKLPYKKFDSFL 549
I L + K E+A ++ E+ NK G+ +K F S +
Sbjct: 504 ISALCDVGKVEDAL-MINELFNKSGVDTSFKMFTSLI 539
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 97/224 (43%), Gaps = 10/224 (4%)
Query: 253 RVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTR 312
R P + + L+L + K + A + +R+ T Y +++ G C+
Sbjct: 631 RDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQGKTKKRLYQVMIVGLCKANKLDD 690
Query: 313 GMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAI 372
M LEEM G +P Y + C EAV L R G I TA +
Sbjct: 691 AMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRKSGRRI---TAFIGNV 747
Query: 373 MIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKID--EAYKFLEEMGN 430
++ ++ + E + M + +P++ + ++I G+ID K L+E+
Sbjct: 748 LLHNAMKSKGVYEAWTRMRNIEDK--IPEMKSLGELIG--LFSGRIDMEVELKRLDEVIE 803
Query: 431 KGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQT 474
K YP D+ TYN LR++ N ++E+A ++ R+ +P+ +T
Sbjct: 804 KCYPLDMYTYNMLLRMIVMN-QAEDAYEMVERIARRGYVPNERT 846
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 108/252 (42%), Gaps = 39/252 (15%)
Query: 331 TYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLM 390
YN ++ AG A +++ M G T PT + +M+ + +N+++ +
Sbjct: 605 AYNLFIEGAGFAGKPKLARLVYDMMDRDGIT---PTVASNILMLQSYLKNEKIADALHFF 661
Query: 391 GYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDN 450
+ G Y+ +I G+C K+D+A FLEEM +G P I Y ++ LC+
Sbjct: 662 HDLREQGKTKK-RLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNE 720
Query: 451 KKSEEALKLY------GRMI-----------------------ELRC----IPSVQTYNM 477
+K +EA+ L GR I +R IP +++
Sbjct: 721 EKYDEAVGLVNEFRKSGRRITAFIGNVLLHNAMKSKGVYEAWTRMRNIEDKIPEMKSLGE 780
Query: 478 LISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKG 537
LI +F D + + E+ ++ LD TY +++ + N+ E+A ++E + +G
Sbjct: 781 LIGLFSGRIDMEVELKRLDEVIEKCYPLDMYTYNMLLR-MIVMNQAEDAYEMVERIARRG 839
Query: 538 IKLPYKKFDSFL 549
+P ++ D L
Sbjct: 840 Y-VPNERTDMIL 850
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 95/219 (43%), Gaps = 3/219 (1%)
Query: 297 YNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMR 356
+NIL+ + G++LL +M G +P +N L KA T A+ +F+ M
Sbjct: 426 FNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMV 485
Query: 357 TKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCG 416
G PT +Y ++ L + +E F++ +MI G P++ Y + +
Sbjct: 486 DNGE---KPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQ 542
Query: 417 KIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYN 476
K + L+EM +KG P +VT+N + N S A + + RM P+ TY
Sbjct: 543 KFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYE 602
Query: 477 MLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIE 515
MLI P A+E + + G L + Y +++
Sbjct: 603 MLIEALANDAKPRLAYELHVKAQNEGLKLSSKPYDAVVK 641
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 114/276 (41%), Gaps = 11/276 (3%)
Query: 282 LYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTY-------N 333
LYK++R + + N L++ + + +++ E+++ G P+N +Y N
Sbjct: 368 LYKRIRERFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFN 427
Query: 334 TALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYM 393
L K G+ V L M KG P + + ++V ++ ++ M
Sbjct: 428 ILLSAASKRGIWRWGVRLLNKMEDKGL---KPQRRHWNAVLVACSKASETTAAIQIFKAM 484
Query: 394 ISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKS 453
+ +G P V +Y ++ + DEA++ M G P++ Y VL +K
Sbjct: 485 VDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKF 544
Query: 454 EEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVM 513
L M PSV T+N +IS A+E + M+ + TY ++
Sbjct: 545 NLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEML 604
Query: 514 IEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFL 549
IE L N K A L + N+G+KL K +D+ +
Sbjct: 605 IEALANDAKPRLAYELHVKAQNEGLKLSSKPYDAVV 640
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 9/220 (4%)
Query: 267 LDALCKCCLV--EYAEG--LYKKMRKI--INTNAETYNILVFGWCRVRSPTRGMKLLEEM 320
L+AL CLV +Y E +Y +M K+ I + ETYN ++ +C S + ++ EM
Sbjct: 154 LNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEM 213
Query: 321 IQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQN 380
+ G +P++ ++ + + E + M+ +G I TY I I +L +
Sbjct: 214 ERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIG---VSTYNIRIQSLCKR 270
Query: 381 DRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTY 440
+ +E L+ M+S+G P+ TY +I G C +EA K + M N+G PD Y
Sbjct: 271 KKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECY 330
Query: 441 NCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLIS 480
+ LC E AL L +E +PS L++
Sbjct: 331 FTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVN 370
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 89/210 (42%), Gaps = 4/210 (1%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMK 315
+P++ +N ++ C+ + + +M RK I N+ ++ +++ G+ K
Sbjct: 184 EPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGK 243
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
+L M G TYN + + CK EA L + M + G P TY+ +I
Sbjct: 244 VLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGM---KPNTVTYSHLIH 300
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
D EE KL M++ GC PD Y +I +C G + A +E K + P
Sbjct: 301 GFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVP 360
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIE 465
+ L + K EEA +L G++ E
Sbjct: 361 SFSIMKSLVNGLAKDSKVEEAKELIGQVKE 390
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 81/172 (47%)
Query: 365 PTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKF 424
P +TY MI ++ + ++ M G P+ +++ +I G K DE K
Sbjct: 185 PDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKV 244
Query: 425 LEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFE 484
L M ++G + TYN ++ LC KKS+EA L M+ P+ TY+ LI F
Sbjct: 245 LAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCN 304
Query: 485 MDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINK 536
DD + A + ++ M RGC D++ Y +I L E A SL +E + K
Sbjct: 305 EDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEK 356
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 2/130 (1%)
Query: 412 VCLCGK-IDEAYKFLEEMGNK-GYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCI 469
CL K EA + EM G PD+ TYN ++V C++ + + + M
Sbjct: 160 ACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIK 219
Query: 470 PSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSL 529
P+ ++ ++IS F+ D D + M+ RG N+ TY + I+ L K++EA +L
Sbjct: 220 PNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKAL 279
Query: 530 LEEVINKGIK 539
L+ +++ G+K
Sbjct: 280 LDGMLSAGMK 289
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 136/340 (40%), Gaps = 20/340 (5%)
Query: 172 FTWAGNQENYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMK----RKNKSTVPVEV 227
F W Q Y + Y+ ++ ++ K Q R+ + MK R + S +
Sbjct: 120 FRWMQKQRWYIPDNGVYSKLISVMG----KKGQTRMAMWLFSEMKNSGCRPDASVYNALI 175
Query: 228 LMTILRKYTEKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR 287
+ + K L V+ + K + + QP + +N+LL A + V+ L+K +
Sbjct: 176 TAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLD 235
Query: 288 -KIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMIT 346
++ + T+N ++ + + +L M +PD T+N +D+Y K
Sbjct: 236 MSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFE 295
Query: 347 EAVDLFE-FMRTKGSTISSPTAKTYAIMIVTLAQN---DRMEECFKLMGYMISSGCLPDV 402
+ F+ MR+K PT T+ MI+ + D+ E FK M M +P
Sbjct: 296 KMEQTFKSLMRSK----EKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDM---NYIPSF 348
Query: 403 TTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGR 462
TY+ +I CG + A + EE+G T N L V C N EA KL+
Sbjct: 349 ITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHN 408
Query: 463 MIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRG 502
R P TY L + + D + ++MEK G
Sbjct: 409 ASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDG 448
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/288 (19%), Positives = 128/288 (44%), Gaps = 14/288 (4%)
Query: 236 TEKYLT--HVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INT 292
++K+L V ++ +K+R + P+ ++ L+ + K A L+ +M+
Sbjct: 110 SDKWLQCLEVFRWMQKQRWYI---PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRP 166
Query: 293 NAETYNILVFGWCRVRSPTRGMK----LLEEMIQLGH-RPDNFTYNTALDTYCKAGMITE 347
+A YN L+ R + ++ L++M + +P+ TYN L + ++G + +
Sbjct: 167 DASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQ 226
Query: 348 AVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKD 407
LF+ + + SP T+ ++ +N ++E ++ M S+ C PD+ T+
Sbjct: 227 VNALFKDLDM---SPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNV 283
Query: 408 IIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELR 467
+I+ + ++ + + + P + T+N + + ++A ++ +M ++
Sbjct: 284 LIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMN 343
Query: 468 CIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIE 515
IPS TY +I M+ A E ++E+ + L T M+E
Sbjct: 344 YIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLE 391
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 104/229 (45%), Gaps = 6/229 (2%)
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
L +EMI+ G +P N TY T +D Y K G+ A+ M G T M
Sbjct: 209 LWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYK 268
Query: 376 TLAQNDRMEECFKLMG----YMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNK 431
+ + EE FK S CL TY +I+ G+I EA + + M +
Sbjct: 269 KAREFQKAEEFFKKWSCDENKADSHVCLSSY-TYNTMIDTYGKSGQIKEASETFKRMLEE 327
Query: 432 GYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGA 491
G P VT+N + + +N + E L + ++L C P +TYN+LIS+ + +D + A
Sbjct: 328 GIVPTTVTFNTMIHIYGNNGQLGEVTSLM-KTMKLHCAPDTRTYNILISLHTKNNDIERA 386
Query: 492 FETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKL 540
++EM+ G D +Y ++ + EEA L+ E+ + +++
Sbjct: 387 GAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEI 435
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 116/296 (39%), Gaps = 47/296 (15%)
Query: 263 FNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMI 321
+N++L L K C Y + L+ +M RK I TY L+ + + + L +M
Sbjct: 190 YNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMS 249
Query: 322 QLGHRPD-----------------------------------------NFTYNTALDTYC 340
++G +PD ++TYNT +DTY
Sbjct: 250 KIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYG 309
Query: 341 KAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLP 400
K+G I EA + F+ M +G PT T+ MI N ++ E LM M C P
Sbjct: 310 KSGQIKEASETFKRMLEEGIV---PTTVTFNTMIHIYGNNGQLGEVTSLMKTM-KLHCAP 365
Query: 401 DVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLY 460
D TY +I I+ A + +EM + G PD V+Y L EEA L
Sbjct: 366 DTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLI 425
Query: 461 GRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEG 516
M + T + L M+ E + + ++ ++ G N+ ++ Y I+
Sbjct: 426 AEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAG-NMSSEGYSANIDA 480
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 120/299 (40%), Gaps = 40/299 (13%)
Query: 296 TYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFM 355
TYN LV P +G LE+M + G+ D Y + ++ K G + A ++++ M
Sbjct: 542 TYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEM 601
Query: 356 RTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLC 415
P Y ++I A +++ + M +G + Y +I+
Sbjct: 602 VEYNI---EPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKV 658
Query: 416 GKIDEA---YKFLEEMGNKGYPPDIVTYNC------------------------------ 442
G +DEA Y+ L + NK PD+ T NC
Sbjct: 659 GYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEF 718
Query: 443 -FLRVLC---DNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEM 498
F +LC N + EEA ++ +M E++ + +YN ++ +F A ET++EM
Sbjct: 719 TFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEM 778
Query: 499 EKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGD 557
G D T+ + L +++A +EE+ K IK + + S L L +GD
Sbjct: 779 VSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIKRGLELWISTLSSLVGIGD 837
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 100/214 (46%), Gaps = 8/214 (3%)
Query: 249 KKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRV 307
K+ + +P++ + +L++A V+ A + M++ I N+ YN L+ + +V
Sbjct: 599 KEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKV 658
Query: 308 RSPTRGMKLLEEMIQLGHR---PDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISS 364
+ +++Q ++ PD +T N ++ Y + M+ +A +F+ M+ +G
Sbjct: 659 GYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEA--- 715
Query: 365 PTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKF 424
T+A+M+ +N R EE ++ M L D +Y ++ L G+ EA +
Sbjct: 716 -NEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVET 774
Query: 425 LEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALK 458
+EM + G PD T+ +L S++A++
Sbjct: 775 FKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVR 808
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/361 (20%), Positives = 132/361 (36%), Gaps = 30/361 (8%)
Query: 232 LRKYTEKYLTHVQKFAKKKRIRVKTQ-----------PEINAFNLLLDALCKCCLVEYAE 280
L YT Y T + + K +I+ ++ P FN ++ +
Sbjct: 296 LSSYT--YNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVT 353
Query: 281 GLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYC 340
L K M+ + TYNIL+ + R +EM G +PD +Y T L +
Sbjct: 354 SLMKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFS 413
Query: 341 KAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFK---LMGYMISSG 397
M+ EA L M I T M V ++ FK + G M S G
Sbjct: 414 IRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEG 473
Query: 398 CLPDVTTYKDIIEGVCLCGKIDEAYKFL---EEMGNKGYPPDIVTYNCFLRVLCDNKKSE 454
++ Y + G + EA + +E+ + ++ YN ++ +K E
Sbjct: 474 YSANIDAYGER-------GYLSEAERVFICCQEVNKR----TVIEYNVMIKAYGISKSCE 522
Query: 455 EALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMI 514
+A +L+ M+ P TYN L+ + D P ++M + G D YC +I
Sbjct: 523 KACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVI 582
Query: 515 EGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMRKFYNP 574
+ A + +E++ I+ + + +D G++ + M++ P
Sbjct: 583 SSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIP 642
Query: 575 A 575
Sbjct: 643 G 643
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 118/289 (40%), Gaps = 10/289 (3%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKL 316
+P+ ++ LL A +VE AEGL +M + N E R+ ++
Sbjct: 399 KPDPVSYRTLLYAFSIRHMVEEAEGLIAEMD---DDNVEIDEYTQSALTRMYVEAEMLEK 455
Query: 317 LEEMIQLGHRPDNFT---YNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIM 373
+ H N + Y+ +D Y + G ++EA +F + ++ T Y +M
Sbjct: 456 SWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQE----VNKRTVIEYNVM 511
Query: 374 IVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGY 433
I + E+ +L M+S G PD TY +++ + + +LE+M GY
Sbjct: 512 IKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGY 571
Query: 434 PPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFE 493
D + Y + + A ++Y M+E P V Y +LI+ F + + A
Sbjct: 572 VSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMS 631
Query: 494 TWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPY 542
+ M++ G ++ Y +I+ +EA ++ +++ K Y
Sbjct: 632 YVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQY 680
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 136/340 (40%), Gaps = 20/340 (5%)
Query: 172 FTWAGNQENYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMK----RKNKSTVPVEV 227
F W Q Y + Y+ ++ ++ K Q R+ + MK R + S +
Sbjct: 120 FRWMQKQRWYIPDNGVYSKLISVMG----KKGQTRMAMWLFSEMKNSGCRPDASVYNALI 175
Query: 228 LMTILRKYTEKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR 287
+ + K L V+ + K + + QP + +N+LL A + V+ L+K +
Sbjct: 176 TAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLD 235
Query: 288 -KIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMIT 346
++ + T+N ++ + + +L M +PD T+N +D+Y K
Sbjct: 236 MSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFE 295
Query: 347 EAVDLFE-FMRTKGSTISSPTAKTYAIMIVTLAQN---DRMEECFKLMGYMISSGCLPDV 402
+ F+ MR+K PT T+ MI+ + D+ E FK M M +P
Sbjct: 296 KMEQTFKSLMRSK----EKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDM---NYIPSF 348
Query: 403 TTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGR 462
TY+ +I CG + A + EE+G T N L V C N EA KL+
Sbjct: 349 ITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHN 408
Query: 463 MIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRG 502
R P TY L + + D + ++MEK G
Sbjct: 409 ASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDG 448
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/288 (19%), Positives = 128/288 (44%), Gaps = 14/288 (4%)
Query: 236 TEKYLT--HVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INT 292
++K+L V ++ +K+R + P+ ++ L+ + K A L+ +M+
Sbjct: 110 SDKWLQCLEVFRWMQKQRWYI---PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRP 166
Query: 293 NAETYNILVFGWCRVRSPTRGMK----LLEEMIQLGH-RPDNFTYNTALDTYCKAGMITE 347
+A YN L+ R + ++ L++M + +P+ TYN L + ++G + +
Sbjct: 167 DASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQ 226
Query: 348 AVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKD 407
LF+ + + SP T+ ++ +N ++E ++ M S+ C PD+ T+
Sbjct: 227 VNALFKDLDM---SPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNV 283
Query: 408 IIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELR 467
+I+ + ++ + + + P + T+N + + ++A ++ +M ++
Sbjct: 284 LIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMN 343
Query: 468 CIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIE 515
IPS TY +I M+ A E ++E+ + L T M+E
Sbjct: 344 YIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLE 391
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 124/285 (43%), Gaps = 6/285 (2%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMK 315
+ ++ F L+D + V A G Y +R K + + +N L+ + + R
Sbjct: 534 EANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFD 593
Query: 316 LLEEMIQLGH--RPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIM 373
+L EM H PD+ + + C AG + A ++++ + G T + Y I
Sbjct: 594 VLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGI---RGTPEVYTIA 650
Query: 374 IVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGY 433
+ + +++ + + M PD + +I+ +DEA+ L++ ++G
Sbjct: 651 VNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGI 710
Query: 434 PPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFE 493
++Y+ + C+ K ++AL+LY ++ ++ P++ T N LI+ E + A E
Sbjct: 711 RLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAME 770
Query: 494 TWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGI 538
E++ G +T TY +++ + E + LL + G+
Sbjct: 771 YLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGV 815
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 118/267 (44%), Gaps = 13/267 (4%)
Query: 289 IINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQ-LGHRPDNFTYNTALDTYCKAGMITE 347
I+N T+N+L+ C G + + ++Q G D Y T + + K+G +
Sbjct: 462 ILNPTMSTFNMLM-SVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDA 520
Query: 348 AVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKD 407
++F M G T+ +I A+ ++ + F G + S PD +
Sbjct: 521 MFEVFHQMSNSGV---EANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNA 577
Query: 408 IIEGVCLCGKIDEAYKFLEEMGNKGYP--PDIVTYNCFLRVLCDNKKSEEALKLYGRMIE 465
+I G +D A+ L EM + +P PD ++ ++ C+ + E A ++Y +MI
Sbjct: 578 LISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVY-QMIH 636
Query: 466 ---LRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNK 522
+R P V Y + ++ + D D A +++M+++ D + +I+ +
Sbjct: 637 KYGIRGTPEV--YTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKM 694
Query: 523 TEEACSLLEEVINKGIKLPYKKFDSFL 549
+EA +L++ ++GI+L + S +
Sbjct: 695 LDEAFGILQDAKSQGIRLGTISYSSLM 721
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 107/246 (43%), Gaps = 4/246 (1%)
Query: 296 TYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFM 355
TY+ ++ R + ++ E M + G PD TY+ LD Y K+G + E + L+E
Sbjct: 223 TYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERA 282
Query: 356 RTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLC 415
G P A ++++ + + ++ M S P+V Y ++E +
Sbjct: 283 VATG---WKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRA 339
Query: 416 GKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTY 475
GK A EM G P+ T +++ + + +AL+L+ M + Y
Sbjct: 340 GKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILY 399
Query: 476 NMLISMFFEMDDPDGAFETWQEM-EKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVI 534
N L++M ++ + A + +M E C D +Y M+ + K E+A L EE++
Sbjct: 400 NTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEML 459
Query: 535 NKGIKL 540
G+++
Sbjct: 460 KAGVQV 465
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 101/226 (44%), Gaps = 7/226 (3%)
Query: 312 RGMKLLEEM----IQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTA 367
R +L+EEM ++ G DN TY+T + + + +A++ FE M G P
Sbjct: 200 RQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLM---PDE 256
Query: 368 KTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEE 427
TY+ ++ +++ ++EE L +++G PD + + + G D L+E
Sbjct: 257 VTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQE 316
Query: 428 MGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDD 487
M + P++V YN L + K A L+ M+E P+ +T L+ ++ +
Sbjct: 317 MKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARW 376
Query: 488 PDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEV 533
A + W+EM+ + +D Y ++ + EEA L ++
Sbjct: 377 ARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDM 422
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 72/160 (45%), Gaps = 1/160 (0%)
Query: 393 MISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKK 452
M+ G D TY II C ++A ++ E M G PD VTY+ L V + K
Sbjct: 212 MVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGK 271
Query: 453 SEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCV 512
EE L LY R + P +++L MF E D DG QEM+ + Y
Sbjct: 272 VEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNT 331
Query: 513 MIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQL 552
++E + K A SL E++ G+ P +K + L+++
Sbjct: 332 LLEAMGRAGKPGLARSLFNEMLEAGLT-PNEKTLTALVKI 370
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 94/226 (41%), Gaps = 3/226 (1%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMK 315
+P+ AF++L + + + ++M+ + + N YN L+ R P
Sbjct: 288 KPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARS 347
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
L EM++ G P+ T + Y KA +A+ L+E M+ K + T M
Sbjct: 348 LFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCA 407
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
+ + E F M + C PD +Y ++ GK ++A + EEM G
Sbjct: 408 DIGLEEEAERLFNDMKESVQ--CRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQV 465
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISM 481
+++ C ++ L K+ ++ + ++ I+ P + L+S+
Sbjct: 466 NVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSV 511
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 104/520 (20%), Positives = 210/520 (40%), Gaps = 64/520 (12%)
Query: 45 SRFSVFHYSSTYSQIIPLSYASSNPLIQS---SFPMNSSVAYHFSMRCYCSETVPXXXXX 101
SRFS SS + + + + S++P + S P + + + E+V
Sbjct: 36 SRFSYLE-SSGNASVRNIRFFSTSPPTEENPVSLPADE-IPISSAAELTLEESVASALGF 93
Query: 102 XXXXDFGS---------GMSNVVQLDSDVDKVCNTMMDNLHGF-----NNLEKALDQLAI 147
D+G G S +V ++++V + + ++++ +LE L+ L +
Sbjct: 94 SESGDYGGTSVEAVGEDGDSEIVAIENEVYQFDDEKLESVLSLLRSDEESLEFGLNALNV 153
Query: 148 PLSTPLVTGVLHRLRYDEKIAFRFFTWAGNQENYSHEPCAYNDMMDILSSTKYKVKQFRI 207
L V V K RF WA E + ++ ++S ++ + +
Sbjct: 154 DLHLDFVVRVFESPGISGKNLIRFLKWATQNEEITVTTSLVESLLVAIASDTRRMDAYGL 213
Query: 208 VCDMLDYMKRKNKSTVPVEVLMTILRKYTE--KYLTHVQKFAKKKRIRVKTQPEINAFNL 265
+ + ++++ + +E+L ++ + + K F+K + P + L
Sbjct: 214 WDLVKEIGEKESCGVLNLEILNELIALFGKLGKSKAAFDVFSKTEEFGF--TPNAKTYYL 271
Query: 266 LLDALCKCCLVEYAEGLYKKMRK--IINTNAETYNIL--------------VFGWCRVRS 309
L+ALCK +++A + +KM K +++ + NI+ V+ + +
Sbjct: 272 TLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKE 331
Query: 310 ---PTR------------------GMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEA 348
P R ++L ++ R ++ + + C+ + +A
Sbjct: 332 KSLPPRFVATLITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDA 391
Query: 349 VDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDI 408
L M +KG +P + +++ ++ ++E +++ M S G PDV TY I
Sbjct: 392 KALLLDMISKGP---APGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVI 448
Query: 409 IEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRC 468
I G G +DEA + L E K VTY+ +R C ++ +EALKL M
Sbjct: 449 ISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGV 508
Query: 469 IPSVQTYNMLISMF-FEMDDPDGAFETWQEMEKRGCNLDT 507
P+ YN LI F + D + A ++EM+++G +L+
Sbjct: 509 QPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLHLNA 548
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 102/284 (35%), Gaps = 39/284 (13%)
Query: 333 NTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGY 392
N + + K G A D+F G T P AKTY + + L + M+ +
Sbjct: 235 NELIALFGKLGKSKAAFDVFSKTEEFGFT---PNAKTYYLTLEALCKRSFMDWACSVCEK 291
Query: 393 MISSGCLPDVTTYKDIIEGVCLCGKIDEAYKF--LEEMGNKGYPPDIVT----------- 439
M+ SG L + +II C GK +EAY L + K PP V
Sbjct: 292 MLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDG 351
Query: 440 -----------------------YNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYN 476
++ + LC + ++A L MI P +N
Sbjct: 352 TITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFN 411
Query: 477 MLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINK 536
+++ + D D A E + ME RG D TY V+I G +EA +L E K
Sbjct: 412 LVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKK 471
Query: 537 GIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMRKFYNPAMARRY 580
KL + + + + + KL + M +F A Y
Sbjct: 472 HKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEY 515
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 118/305 (38%), Gaps = 44/305 (14%)
Query: 243 VQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILV 301
+Q +KK IR T +N L+DA K +E EGL+ +MR K + +A TYNIL+
Sbjct: 366 IQTEMEKKGIRSNTI----VYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILM 421
Query: 302 FGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITE-AVDLFEFMRTKGS 360
+ R P LL EM LG P+ +Y + Y + +++ A D F M+ G
Sbjct: 422 DAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGL 481
Query: 361 TISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIE---------- 410
P++ +Y +I + + E+ + M G P V TY +++
Sbjct: 482 ---KPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGK 538
Query: 411 -------------------------GVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLR 445
G G EA + E G P ++TYN +
Sbjct: 539 LMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMN 598
Query: 446 VLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNL 505
+ + +L M L P TY+ +I F + D AF + M K G
Sbjct: 599 AYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVP 658
Query: 506 DTDTY 510
D +Y
Sbjct: 659 DPRSY 663
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 107/273 (39%), Gaps = 8/273 (2%)
Query: 297 YNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAV-DLFEFM 355
YN + G + ++ E M ++ PDN T + T KAG + V ++FE M
Sbjct: 276 YNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKM 335
Query: 356 RTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLC 415
KG S + ++ + EE + M G + Y +++
Sbjct: 336 SEKGVKWSQ---DVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKS 392
Query: 416 GKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTY 475
I+E EM +KG P TYN + + + L M +L P+V++Y
Sbjct: 393 NHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSY 452
Query: 476 NMLISMFFEMDD-PDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVI 534
LIS + D A + + M+K G + +Y +I E+A + EE+
Sbjct: 453 TCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMC 512
Query: 535 NKGIKLPYKKFDSFLIQL---SDLGDLHAIHKL 564
+GIK + + S L D G L I KL
Sbjct: 513 KEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKL 545
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 122/315 (38%), Gaps = 7/315 (2%)
Query: 227 VLMTILRKYTEKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM 286
+L+T LRK + F K VK ++ F L+ + C L E A + +M
Sbjct: 313 ILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDV--FGGLVKSFCDEGLKEEALVIQTEM 370
Query: 287 -RKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMI 345
+K I +N YN L+ + + L EM G +P TYN +D Y +
Sbjct: 371 EKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQP 430
Query: 346 TEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEE-CFKLMGYMISSGCLPDVTT 404
L M G P K+Y +I + +M + M G P +
Sbjct: 431 DIVETLLREMEDLGL---EPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHS 487
Query: 405 YKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMI 464
Y +I + G ++AY EEM +G P + TY L + + + ++++ M+
Sbjct: 488 YTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLML 547
Query: 465 ELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTE 524
+ + TYN L+ F + A + E K G TY +++ +
Sbjct: 548 REKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDA 607
Query: 525 EACSLLEEVINKGIK 539
+ LL+E+ +K
Sbjct: 608 KLPQLLKEMAALNLK 622
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 109/262 (41%), Gaps = 15/262 (5%)
Query: 289 IINTNAETYNILV-FGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYC------- 340
+ TN +T + + F R K L+E LG F + DT C
Sbjct: 154 VFVTNQQTLGVHIPFESGVAREILELAKNLKENQTLGEMLSGFERRVS-DTECVEALVMM 212
Query: 341 -KAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEE-CFKLMGYMISSGC 398
++G + + +E+M + +++SP A + ++ TL +RM + L+ +
Sbjct: 213 GESGFVKSCLYFYEWMSLQEPSLASPRACS---VLFTLLGRERMADYILLLLSNLPDKEE 269
Query: 399 LPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKS-EEAL 457
DV Y I G+ + D+A++ E M PD VT + L +S +E
Sbjct: 270 FRDVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVW 329
Query: 458 KLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGL 517
+++ +M E S + L+ F + + A EMEK+G +T Y +++
Sbjct: 330 EIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAY 389
Query: 518 FNCNKTEEACSLLEEVINKGIK 539
N EE L E+ +KG+K
Sbjct: 390 NKSNHIEEVEGLFTEMRDKGLK 411
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 89/203 (43%), Gaps = 4/203 (1%)
Query: 253 RVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPT 311
+V +P +++ L+ A E A +++M ++ I + ETY ++ + R
Sbjct: 478 KVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTG 537
Query: 312 RGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYA 371
+ M++ + M++ + TYNT LD + K G+ EA D+ G P+ TY
Sbjct: 538 KLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGL---QPSVMTYN 594
Query: 372 IMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNK 431
+++ A+ + + +L+ M + PD TY +I A+ + + M
Sbjct: 595 MLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKS 654
Query: 432 GYPPDIVTYNCFLRVLCDNKKSE 454
G PD +Y +L D K++
Sbjct: 655 GQVPDPRSYEKLRAILEDKAKTK 677
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/227 (19%), Positives = 99/227 (43%), Gaps = 11/227 (4%)
Query: 257 QPEINAFNLLLDALCKCC-LVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGM 314
+P + ++ L+ A + + + A + +M+K+ + ++ +Y L+ + +
Sbjct: 446 EPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAY 505
Query: 315 KLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFM---RTKGSTISSPTAKTYA 371
EEM + G +P TY + LD + ++G + +++++ M + KG+ I TY
Sbjct: 506 ASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRI------TYN 559
Query: 372 IMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNK 431
++ A+ E ++ G P V TY ++ G+ + + L+EM
Sbjct: 560 TLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAAL 619
Query: 432 GYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNML 478
PD +TY+ + + + A + M++ +P ++Y L
Sbjct: 620 NLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKL 666
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 120/266 (45%), Gaps = 24/266 (9%)
Query: 203 KQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKY-----TEKYLTHVQKFAKKKRIRVKTQ 257
K F V + D + ++ +P ++ IL K T + + + + K + V T
Sbjct: 151 KNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTI 210
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKL 316
AF +L +L K +E A+ L+ +M +K + YN+ + + SP R +L
Sbjct: 211 ----AFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMS-AQKESPERVKEL 265
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
+EEM +G +PD +YN + YC+ GM+ EA ++E + +P A T+ +I
Sbjct: 266 IEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNC---APNAATFRTLIFH 322
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
L + E+ + + + +PD T K ++ G+ K D+A K L K +PP
Sbjct: 323 LCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDA-KGLIRTVKKKFPP- 380
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGR 462
FL KK EE L LY +
Sbjct: 381 -----SFLNAW---KKLEEELGLYSK 398
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 115/269 (42%), Gaps = 25/269 (9%)
Query: 262 AFNLLLDALCKCCLVEYAEGLY----KKMRKIINTNAETYNILVFGWCRVRSPTRGMKLL 317
+FN LL+A + L+ ++ KII + +Y IL+ +C +P + ++++
Sbjct: 139 SFNALLNACLHSKNFDKVPQLFDEIPQRYNKII-PDKISYGILIKSYCDSGTPEKAIEIM 197
Query: 318 EEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTL 377
+M G + T L + K G + A +L+ M KG + + Y + I++
Sbjct: 198 RQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAA---YNVRIMS- 253
Query: 378 AQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDI 437
AQ + E +L+ M S G PD +Y ++ C G +DEA K E + P+
Sbjct: 254 AQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNA 313
Query: 438 VTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFE---MDDPDGAFET 494
T+ + LC ++ E+ ++ + + + IP T L+ E DD G T
Sbjct: 314 ATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAKGLIRT 373
Query: 495 ------------WQEMEKR-GCNLDTDTY 510
W+++E+ G TD +
Sbjct: 374 VKKKFPPSFLNAWKKLEEELGLYSKTDAF 402
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 77/179 (43%), Gaps = 2/179 (1%)
Query: 332 YNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMG 391
Y+T + +Y +A M A+ FE M G+ S+ + + D++ + F +
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 392 YMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNK 451
+ +PD +Y +I+ C G ++A + + +M KG + + L L
Sbjct: 165 QRYNK-IIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKG 223
Query: 452 KSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTY 510
+ E A L+ M++ C YN+ I M + + P+ E +EM G DT +Y
Sbjct: 224 ELEVADNLWNEMVKKGCELDNAAYNVRI-MSAQKESPERVKELIEEMSSMGLKPDTISY 281
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 102/225 (45%), Gaps = 9/225 (4%)
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
++ +++ + H + YN+ + + KAG + AV++F M T + PT +TY I+
Sbjct: 194 IVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFK 253
Query: 376 TLAQNDR--------MEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEE 427
L ME L M+ SG PDV +++G L +++A + +
Sbjct: 254 ALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQ 313
Query: 428 MGNK-GYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMD 486
M P+ TY+ + LC ++ A +L M +P+ ++YN L++ F
Sbjct: 314 MSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSG 373
Query: 487 DPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLE 531
+ D A + EM + G +D +Y +++ K +EA LLE
Sbjct: 374 EIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLE 418
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 120/289 (41%), Gaps = 31/289 (10%)
Query: 161 LRYDEKIAFRFFTWAGNQENYSHEPCAYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNK 220
L D + F F WA Q ++HE C+Y+ + L + K + IV +L N+
Sbjct: 148 LEEDPFLCFHLFNWASQQPRFTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNE 207
Query: 221 STVPVEVLMTILRKYTEKYLTHVQKFAKKKRI--------RVKTQPEINAFNLLLDALCK 272
+ + Y T K + I ++ +P I +++L AL
Sbjct: 208 NLYNSIIF----------YFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLG 257
Query: 273 CCLVEYAEGLYKK-----MRKIINTNAE----TYNILVFGWCRVRSPTRGMKLLEEM-IQ 322
Y +Y + R+++++ E N LV G+ +++ +M +
Sbjct: 258 RGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVV 317
Query: 323 LGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDR 382
P++FTY+ + C G A +L M+ KG P K+Y ++ A +
Sbjct: 318 YDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFV---PNGKSYNSLVNAFALSGE 374
Query: 383 MEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNK 431
+++ K + MI +G + D +Y+ +++ C GK DEA + LE + K
Sbjct: 375 IDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREK 423
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:4962293-4965976 FORWARD LENGTH=1227
Length = 1227
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 107/253 (42%), Gaps = 31/253 (12%)
Query: 296 TYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFM 355
T+N LV G+ + ++ L MI G +P+N + + C G + +A+DL++ M
Sbjct: 946 TFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVM 1005
Query: 356 RTKGSTISSPTAKT-------------------------------YAIMIVTLAQNDRME 384
+KG + S +T Y +I L+ ++
Sbjct: 1006 ESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGMMAPNYDNIIKKLSDRGNLD 1065
Query: 385 ECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFL 444
L+ M+ + +P ++Y +I G+ ++D+A F EM G P I T++ +
Sbjct: 1066 IAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLV 1125
Query: 445 RVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCN 504
C+ + E+ +L M+ L PS + + +I F + A E + M+K G
Sbjct: 1126 HKFCEACQVLESERLIKSMVGLGESPSQEMFKTVIDRFRVEKNTVKASEMMEMMQKCGYE 1185
Query: 505 LDTDTYCVMIEGL 517
+D +T+ +I +
Sbjct: 1186 VDFETHWSLISNM 1198
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 91/416 (21%), Positives = 165/416 (39%), Gaps = 63/416 (15%)
Query: 211 MLDYMKRKNKSTVPVEVLMTILRKYTEKYLTHVQKFAKKKRI---RVKTQPEINAFNL-- 265
+ D+M+RK VP+ IL L V + RI V+T+ E+N N+
Sbjct: 205 LFDWMRRK--GLVPLTSCYQILIDQ----LVRVHRTESAYRICLDWVETRAELNHMNIDS 258
Query: 266 ---LLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKLLEEMI 321
+++ LC V+ A L +K+ + N+ Y+ + G+ + LL +
Sbjct: 259 IGKVIELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIGYNEKQDFE---DLLSFIG 315
Query: 322 QLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQND 381
++ + PD F N L + C+ A E + G T+ I+I
Sbjct: 316 EVKYEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGF---KQDEVTFGILIGWCCYEG 372
Query: 382 RMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYN 441
++ + ++S G PDV +Y I+ G+ G + L+EM G + T+
Sbjct: 373 DIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFK 432
Query: 442 CFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMD----------DPDGA 491
+ C ++ EEA ++ +M I + + + L F + D D
Sbjct: 433 IMVTGYCKARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRLKRDNDST 492
Query: 492 FETWQEMEKRGCNL----DTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDS 547
F + + G L D D Y E+ ++ V+++ + LP +F+S
Sbjct: 493 FSKAEFFDDLGNGLYLHTDLDAY-------------EQRVNM---VLDRSV-LP--EFNS 533
Query: 548 FLIQLSDLGDLHAIHKLSDHMRKFYNPAMARRYAI---------SQKRKSISLRER 594
+++ S+ GDL +L D M ++ R +A+ + R SISL E+
Sbjct: 534 LIVRASEDGDLQTALRLLDEMARWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEK 589
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 129/293 (44%), Gaps = 14/293 (4%)
Query: 262 AFNLLLDALCKC-CLVEYAEGLYKKMRKII-NTNAETYNILVFGWCRVRSPTRGMKLL-E 318
+F +L+ +LC + + L +K K+ + ET N LV +C+ + +R KL+
Sbjct: 565 SFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGETLNFLVQEYCK-KGFSRHSKLIFH 623
Query: 319 EMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLA 378
+M+Q+ H DN TY + + +CK + + ++++ + P + L
Sbjct: 624 KMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAAQNDNWL---PDLNDCGDLWNCLV 680
Query: 379 QNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIV 438
+ +EE +L + S L + +E + + G A+ ++ + +G +
Sbjct: 681 RKGLVEEVVQLFERVFISYPLSQSEACRIFVEKLTVLGFSCIAHSVVKRLEGEGCIVEQE 740
Query: 439 TYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEM 498
YN ++ LC KK A + M++ + IPS+ + MLI + AF +++
Sbjct: 741 VYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIPRLCRANKAGTAFNLAEQI 800
Query: 499 EKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQ 551
+ + + +I+GL K +A + L +++ G+ Y K + + Q
Sbjct: 801 D------SSYVHYALIKGLSLAGKMLDAENQLRIMLSNGLS-SYNKIYNVMFQ 846
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 106/265 (40%), Gaps = 10/265 (3%)
Query: 295 ETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEF 354
E YN L+ G C + + +L+EM+ H P + + C+A A +L E
Sbjct: 740 EVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIPRLCRANKAGTAFNLAEQ 799
Query: 355 MRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCL 414
+ ++ + +I L+ +M + + M+S+G Y + +G C
Sbjct: 800 I---------DSSYVHYALIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQGYCK 850
Query: 415 CGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPS-VQ 473
+ + L M K + +Y ++R +C +S A+ L ++ P V
Sbjct: 851 GNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISLKEFLLLGESNPGGVI 910
Query: 474 TYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEV 533
YNMLI F + + EM+ RG D T+ ++ G + + L +
Sbjct: 911 IYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAM 970
Query: 534 INKGIKLPYKKFDSFLIQLSDLGDL 558
I+KG+K + + L D GD+
Sbjct: 971 ISKGMKPNNRSLRAVTSSLCDNGDV 995
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 105/262 (40%), Gaps = 32/262 (12%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKL 316
P++ F +L KC L + + LY ++RK I+ N E YN ++ R
Sbjct: 627 PDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGT 686
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKG-------STISSPTAK- 368
EEMI+ G P+ T+N LD Y KA + + +LF + G +TI + K
Sbjct: 687 FEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKN 746
Query: 369 -----------------------TYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTY 405
Y ++ ++ +ME+ ++ M S PD TY
Sbjct: 747 KDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTY 806
Query: 406 KDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIE 465
+I G IDE L+E+ G PD+ +YN ++ EEA+ L M
Sbjct: 807 NIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRG 866
Query: 466 LRCIPSVQTYNMLISMFFEMDD 487
IP TY L++ D+
Sbjct: 867 RNIIPDKVTYTNLVTALRRNDE 888
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 3/207 (1%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPT 311
IR P FN+LLD K L + L+ ++ + +YN ++ + + + T
Sbjct: 691 IRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYT 750
Query: 312 RGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYA 371
++ M G YNT LD Y K + + + + R K ST S P TY
Sbjct: 751 NMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILK--RMKKST-SGPDHYTYN 807
Query: 372 IMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNK 431
IMI + ++E ++ + SG PD+ +Y +I+ + G ++EA ++EM +
Sbjct: 808 IMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGR 867
Query: 432 GYPPDIVTYNCFLRVLCDNKKSEEALK 458
PD VTY + L N + EA+K
Sbjct: 868 NIIPDKVTYTNLVTALRRNDEFLEAIK 894
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/349 (18%), Positives = 152/349 (43%), Gaps = 16/349 (4%)
Query: 187 AYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEKYLTHVQKF 246
AY+ M+ I + +++ + +++D MK +++ + +E + +L Y+++ + +
Sbjct: 281 AYSSMITIYT----RLRLYDKAEEVIDLMK-QDRVRLKLENWLVMLNAYSQQGKMELAES 335
Query: 247 AKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWC 305
P I A+N L+ K +E A+GL+ ++ I + + +Y ++ GW
Sbjct: 336 ILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWG 395
Query: 306 RVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSP 365
R + +E+ + G++P++F T ++ K G A+ E M G SS
Sbjct: 396 RADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSS- 454
Query: 366 TAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFL 425
I++ + +++ ++ + + T++ ++ G +D+ L
Sbjct: 455 ---ILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLL 511
Query: 426 EEMGNKGYPPDIVTYNCFLRVLCDNKKSEE---ALKLYGRMIELRCIPSVQTYNMLISMF 482
E K + + + ++C K+S + A+K+Y +E ++ + +I ++
Sbjct: 512 RE---KKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIY 568
Query: 483 FEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLE 531
M + A + + ++ G LD + +++ EEACS+LE
Sbjct: 569 TVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLE 617
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 83/418 (19%), Positives = 160/418 (38%), Gaps = 46/418 (11%)
Query: 136 NNLEKALDQLAIPLSTPL--VTGVLHRLRY-DEKIAFRFFTWAGNQENYSHEPCAYNDMM 192
NN E ++ AI L G+L RL + A +FF W AY+ ++
Sbjct: 122 NNGEIDVNYSAIKPGQSLEHCNGILKRLESCSDTNAIKFFDWMRCNGKLVGNFVAYSLIL 181
Query: 193 DILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEKYLTHVQKFAKKKRI 252
+L + +++ D++ + ++ +V T++ T+K + +
Sbjct: 182 RVLG----RREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASKWFHMML 237
Query: 253 RVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTR 312
+P + +L+ K VE AE + MRK Y+ ++ + R+R +
Sbjct: 238 EFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCESAYSSMITIYTRLRLYDK 297
Query: 313 GMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAI 372
++++ M Q R + L+ Y + G + A + M G SP Y
Sbjct: 298 AEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAG---FSPNIIAYNT 354
Query: 373 MIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKG 432
+I + +ME L + + G PD T+Y+ +IEG +EA + +E+ G
Sbjct: 355 LITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCG 414
Query: 433 YPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAF 492
Y P+ ++N F LI++ + D DGA
Sbjct: 415 YKPN--SFNLF---------------------------------TLINLQAKYGDRDGAI 439
Query: 493 ETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLI 550
+T ++M GC + ++++ K + +L+ + I+L F S ++
Sbjct: 440 KTIEDMTGIGCQY-SSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVM 496
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 6/138 (4%)
Query: 295 ETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEF 354
E YN L+ + + + + +L+ M + PD++TYN ++ Y + G I E D+ +
Sbjct: 769 EAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKE 828
Query: 355 MRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCL 414
++ G P +Y +I +EE L+ M +PD TY +++ +
Sbjct: 829 LKESGL---GPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRR 885
Query: 415 CGKIDEAYK---FLEEMG 429
+ EA K ++++MG
Sbjct: 886 NDEFLEAIKWSLWMKQMG 903
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 103/216 (47%), Gaps = 7/216 (3%)
Query: 256 TQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGM 314
+ P+ + ++ A L++ A + +M ++ + N TYN+L+ G+C+ R
Sbjct: 448 SHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAE 507
Query: 315 KLLEEMIQ-LGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIM 373
LL EM + G PD +YN +D A+ F MRT+G +PT +Y +
Sbjct: 508 DLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGI---APTKISYTTL 564
Query: 374 IVTLAQNDRMEECFKLMGYMISSGCLP-DVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKG 432
+ A + + + ++ M++ + D+ + ++EG C G I++A + + M G
Sbjct: 565 MKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENG 624
Query: 433 YPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRC 468
+ P++ TY + +K +AL L+ + I+ RC
Sbjct: 625 FYPNVATYGSLANGVSQARKPGDALLLW-KEIKERC 659
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 103/249 (41%), Gaps = 7/249 (2%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAE----TYNILVFGWCRVRSPTRG 313
P+ + L+ K V + + MR+ + N+ TY +V + R
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 314 MKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIM 373
++L EM ++G + TYN L YCK I A DL M T+ + I P +Y I+
Sbjct: 472 RQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREM-TEDAGIE-PDVVSYNII 529
Query: 374 IVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKG- 432
I D M + G P +Y +++ + G+ A + +EM N
Sbjct: 530 IDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPR 589
Query: 433 YPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAF 492
D++ +N + C E+A ++ RM E P+V TY L + + P A
Sbjct: 590 VKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDAL 649
Query: 493 ETWQEMEKR 501
W+E+++R
Sbjct: 650 LLWKEIKER 658
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 90/215 (41%), Gaps = 6/215 (2%)
Query: 327 PDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEEC 386
PD+ Y T + Y K G + + + E MR + S P TY ++ M+
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 387 FKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMG-NKGYPPDIVTYNCFLR 445
+++ M G + TY +++G C +ID A L EM + G PD+V+YN +
Sbjct: 472 RQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIID 531
Query: 446 --VLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQE-MEKRG 502
+L D+ S AL + M P+ +Y L+ F P A + E M
Sbjct: 532 GCILIDD--SAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPR 589
Query: 503 CNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKG 537
+D + +++EG E+A ++ + G
Sbjct: 590 VKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENG 624
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 127/279 (45%), Gaps = 37/279 (13%)
Query: 293 NAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLF 352
N T+ +V G+ R + + L +EM + + ++NT +D Y ++G I +A++LF
Sbjct: 108 NVVTWTAMVSGYLRSKQLSIAEMLFQEMPE----RNVVSWNTMIDGYAQSGRIDKALELF 163
Query: 353 EFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGV 412
+ M + ++ M+ L Q R++E L M DV ++ +++G+
Sbjct: 164 DEMPERNIV-------SWNSMVKALVQRGRIDEAMNLFERMPRR----DVVSWTAMVDGL 212
Query: 413 CLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSV 472
GK+DEA + + M + +I+++N + N + +EA +L+ M E
Sbjct: 213 AKNGKVDEARRLFDCMPER----NIISWNAMITGYAQNNRIDEADQLFQVMPE----RDF 264
Query: 473 QTYNMLISMFF---EMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSL 529
++N +I+ F EM+ G F+ E + ++ MI G + EEA ++
Sbjct: 265 ASWNTMITGFIRNREMNKACGLFDRMPEK-------NVISWTTMITGYVENKENEEALNV 317
Query: 530 LEEVINKG-IKLPYKKFDSFLIQLSDLGDL---HAIHKL 564
+++ G +K + S L SDL L IH+L
Sbjct: 318 FSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQL 356
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 113/261 (43%), Gaps = 49/261 (18%)
Query: 305 CRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFE----------- 353
C+V KL + + + D T+ + Y K G + EA +LF+
Sbjct: 57 CKVGKIAEARKLFDGLPE----RDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTW 112
Query: 354 ------FMRTKGSTIS--------SPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCL 399
++R+K +I+ ++ MI AQ+ R+++ +L M
Sbjct: 113 TAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPER--- 169
Query: 400 PDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKL 459
++ ++ +++ + G+IDEA E M + D+V++ + L N K +EA +L
Sbjct: 170 -NIVSWNSMVKALVQRGRIDEAMNLFERMPRR----DVVSWTAMVDGLAKNGKVDEARRL 224
Query: 460 YGRMIELRCIP--SVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGL 517
+ C+P ++ ++N +I+ + + + D A + +Q M +R D ++ MI G
Sbjct: 225 FD------CMPERNIISWNAMITGYAQNNRIDEADQLFQVMPER----DFASWNTMITGF 274
Query: 518 FNCNKTEEACSLLEEVINKGI 538
+ +AC L + + K +
Sbjct: 275 IRNREMNKACGLFDRMPEKNV 295
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/308 (20%), Positives = 122/308 (39%), Gaps = 4/308 (1%)
Query: 263 FNLLLDALCKCCLVEYAEGLYKKMRKIINT-NAETYNILVFGWCRVRSPTRGMKLLEEMI 321
F +L+ A K AE + + K+ +T N +Y L+ + R + M
Sbjct: 142 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 201
Query: 322 QLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQND 381
G P TY L T+ + EA ++FE + + + P K Y +MI +
Sbjct: 202 SSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAG 261
Query: 382 RMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYN 441
E+ K+ M+ G TY ++ E K ++M PD+V+Y
Sbjct: 262 NYEKARKVFSSMVGKGVPQSTVTYNSLM---SFETSYKEVSKIYDQMQRSDIQPDVVSYA 318
Query: 442 CFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKR 501
++ ++ EEAL ++ M++ P+ + YN+L+ F + A ++ M +
Sbjct: 319 LLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD 378
Query: 502 GCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAI 561
D +Y M+ N + E A + + G + + + + + D+ +
Sbjct: 379 RIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKM 438
Query: 562 HKLSDHMR 569
++ + MR
Sbjct: 439 MEVYEKMR 446
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 153/351 (43%), Gaps = 26/351 (7%)
Query: 201 KVKQFRIVCDMLDYMKRKNK---STVPVEVLMTILRKY-----TEKYLTHVQKFAKKKRI 252
++K++ +V ++L++++ +N S + +L+T K E+ L+ + K
Sbjct: 115 QLKKWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMG----- 169
Query: 253 RVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPT 311
+ P + ++ L+++ + AE ++++M+ +A TY I++ +
Sbjct: 170 ---STPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFK 226
Query: 312 RGMKLLEEMIQLGH---RPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAK 368
++ E ++ +PD Y+ + Y KAG +A +F M KG S+ T
Sbjct: 227 EAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYN 286
Query: 369 TYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEM 428
+ ++ +E K+ M S PDV +Y +I+ + +EA EEM
Sbjct: 287 SL------MSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEM 340
Query: 429 GNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDP 488
+ G P YN L + E+A ++ M R P + +Y ++S + D
Sbjct: 341 LDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDM 400
Query: 489 DGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
+GA + ++ ++ G + TY +I+G N E+ + E++ GIK
Sbjct: 401 EGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIK 451
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 85/213 (39%), Gaps = 33/213 (15%)
Query: 282 LYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYC 340
+Y +M R I + +Y +L+ + R R + + EEM+ G RP + YN LD +
Sbjct: 301 IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFA 360
Query: 341 KAGMITEAVDLFEFMR------------------TKGSTISS--------------PTAK 368
+GM+ +A +F+ MR S + P
Sbjct: 361 ISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIV 420
Query: 369 TYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEM 428
TY +I A+ + +E+ ++ M SG + T I++ C A + +EM
Sbjct: 421 TYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEM 480
Query: 429 GNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYG 461
+ G PPD N L + + EEA +L G
Sbjct: 481 ESCGVPPDQKAKNVLLSLASTQDELEEAKELTG 513
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 101/238 (42%), Gaps = 9/238 (3%)
Query: 336 LDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMIS 395
+ Y K G A + + GST P +Y ++ + + + + M S
Sbjct: 146 ITAYGKLGNFNGAERVLSVLSKMGST---PNVISYTALMESYGRGGKCNNAEAIFRRMQS 202
Query: 396 SGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEM-GNKGYP--PDIVTYNCFLRVLCDNKK 452
SG P TY+ I++ K EA + E + K P PD Y+ + +
Sbjct: 203 SGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGN 262
Query: 453 SEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCV 512
E+A K++ M+ S TYN L+S FE + + + +M++ D +Y +
Sbjct: 263 YEKARKVFSSMVGKGVPQSTVTYNSLMS--FETSYKE-VSKIYDQMQRSDIQPDVVSYAL 319
Query: 513 MIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMRK 570
+I+ + EEA S+ EE+++ G++ +K ++ L + G + + MR+
Sbjct: 320 LIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRR 377
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 153/351 (43%), Gaps = 26/351 (7%)
Query: 201 KVKQFRIVCDMLDYMKRKNK---STVPVEVLMTILRKY-----TEKYLTHVQKFAKKKRI 252
++K++ +V ++L++++ +N S + +L+T K E+ L+ + K
Sbjct: 122 QLKKWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMG----- 176
Query: 253 RVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPT 311
+ P + ++ L+++ + AE ++++M+ +A TY I++ +
Sbjct: 177 ---STPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFK 233
Query: 312 RGMKLLEEMIQLGH---RPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAK 368
++ E ++ +PD Y+ + Y KAG +A +F M KG S+ T
Sbjct: 234 EAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYN 293
Query: 369 TYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEM 428
+ ++ +E K+ M S PDV +Y +I+ + +EA EEM
Sbjct: 294 SL------MSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEM 347
Query: 429 GNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDP 488
+ G P YN L + E+A ++ M R P + +Y ++S + D
Sbjct: 348 LDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDM 407
Query: 489 DGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
+GA + ++ ++ G + TY +I+G N E+ + E++ GIK
Sbjct: 408 EGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIK 458
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/308 (20%), Positives = 122/308 (39%), Gaps = 4/308 (1%)
Query: 263 FNLLLDALCKCCLVEYAEGLYKKMRKIINT-NAETYNILVFGWCRVRSPTRGMKLLEEMI 321
F +L+ A K AE + + K+ +T N +Y L+ + R + M
Sbjct: 149 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 208
Query: 322 QLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQND 381
G P TY L T+ + EA ++FE + + + P K Y +MI +
Sbjct: 209 SSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAG 268
Query: 382 RMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYN 441
E+ K+ M+ G TY ++ E K ++M PD+V+Y
Sbjct: 269 NYEKARKVFSSMVGKGVPQSTVTYNSLM---SFETSYKEVSKIYDQMQRSDIQPDVVSYA 325
Query: 442 CFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKR 501
++ ++ EEAL ++ M++ P+ + YN+L+ F + A ++ M +
Sbjct: 326 LLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD 385
Query: 502 GCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAI 561
D +Y M+ N + E A + + G + + + + + D+ +
Sbjct: 386 RIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKM 445
Query: 562 HKLSDHMR 569
++ + MR
Sbjct: 446 MEVYEKMR 453
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 33/213 (15%)
Query: 282 LYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYC 340
+Y +M R I + +Y +L+ + R R + + EEM+ G RP + YN LD +
Sbjct: 308 IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFA 367
Query: 341 KAGMITEAVDLFEFMR---------TKGSTISS-----------------------PTAK 368
+GM+ +A +F+ MR + + +S+ P
Sbjct: 368 ISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIV 427
Query: 369 TYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEM 428
TY +I A+ + +E+ ++ M SG + T I++ C A + +EM
Sbjct: 428 TYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEM 487
Query: 429 GNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYG 461
+ G PPD N L + + EEA +L G
Sbjct: 488 ESCGVPPDQKAKNVLLSLASTQDELEEAKELTG 520
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 102/238 (42%), Gaps = 9/238 (3%)
Query: 336 LDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMIS 395
+ Y K G A + + GST P +Y ++ + + + + M S
Sbjct: 153 ITAYGKLGNFNGAERVLSVLSKMGST---PNVISYTALMESYGRGGKCNNAEAIFRRMQS 209
Query: 396 SGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEM-GNKGYP--PDIVTYNCFLRVLCDNKK 452
SG P TY+ I++ K EA + E + K P PD Y+ + +
Sbjct: 210 SGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGN 269
Query: 453 SEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCV 512
E+A K++ M+ S TYN L+S FE + + + + +M++ D +Y +
Sbjct: 270 YEKARKVFSSMVGKGVPQSTVTYNSLMS--FETSYKEVS-KIYDQMQRSDIQPDVVSYAL 326
Query: 513 MIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMRK 570
+I+ + EEA S+ EE+++ G++ +K ++ L + G + + MR+
Sbjct: 327 LIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRR 384
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 66/133 (49%), Gaps = 3/133 (2%)
Query: 327 PDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEEC 386
P TYN+ +D +CK + +A + + M +KG SP T++ +I + R++
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGC---SPDVVTFSTLINGYCKAKRVDNG 64
Query: 387 FKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRV 446
++ M G + + TY +I G C G +D A L EM + G PD +T++C L
Sbjct: 65 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAG 124
Query: 447 LCDNKKSEEALKL 459
LC K+ +A +
Sbjct: 125 LCSKKELRKAFAI 137
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 72/141 (51%)
Query: 393 MISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKK 452
M+ P TY +I+G C ++D+A + L+ M +KG PD+VT++ + C K+
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 453 SEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCV 512
+ ++++ M + + TY LI F ++ D D A + EM G D T+
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 513 MIEGLFNCNKTEEACSLLEEV 533
M+ GL + + +A ++LE++
Sbjct: 121 MLAGLCSKKELRKAFAILEDL 141
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 62/136 (45%)
Query: 365 PTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKF 424
PT TY MI + DR+++ +++ M S GC PDV T+ +I G C ++D +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 425 LEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFE 484
EM +G + VTY + C + A L MI P T++ +++
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 485 MDDPDGAFETWQEMEK 500
+ AF ++++K
Sbjct: 128 KKELRKAFAILEDLQK 143
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 3/133 (2%)
Query: 296 TYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFM 355
TYN ++ G+C+ ++L+ M G PD T++T ++ YCKA + +++F M
Sbjct: 12 TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 71
Query: 356 RTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLC 415
+G ++ TY +I Q ++ L+ MIS G PD T+ ++ G+C
Sbjct: 72 HRRGIVANTV---TYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSK 128
Query: 416 GKIDEAYKFLEEM 428
++ +A+ LE++
Sbjct: 129 KELRKAFAILEDL 141
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 61/136 (44%)
Query: 435 PDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFET 494
P +TYN + C + ++A ++ M C P V T++ LI+ + + D E
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 495 WQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSD 554
+ EM +RG +T TY +I G + A LL E+I+ G+ Y F L L
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 555 LGDLHAIHKLSDHMRK 570
+L + + ++K
Sbjct: 128 KKELRKAFAILEDLQK 143
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKL 316
P++ F+ L++ CK V+ ++ +M R+ I N TY L+ G+C+V L
Sbjct: 43 PDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDL 102
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFE 353
L EMI G PD T++ L C + +A + E
Sbjct: 103 LNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILE 139
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 104/221 (47%), Gaps = 7/221 (3%)
Query: 327 PDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEEC 386
P+ +YN ++ +C G + EA++++ + +P++ TY + L Q R+ +
Sbjct: 214 PNVVSYNQIINAHCDEGNVDEALEVYRHILANAPF--APSSVTYRHLTKGLVQAGRIGDA 271
Query: 387 FKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRV 446
L+ M+S G D T Y ++I G G D+A +F +E+ +K D + F+
Sbjct: 272 ASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEY 331
Query: 447 LCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGC--- 503
+ +EA++ Y +++ + T N+L+ +F + D A+ + EM
Sbjct: 332 WFEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPN 391
Query: 504 --NLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPY 542
++++DT +M+ F + EA + ++V +K P+
Sbjct: 392 ILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPF 432
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 100/213 (46%), Gaps = 17/213 (7%)
Query: 264 NLLLDALCKCCLVEYAEGLYKKM------RKIINTNAETYNILVFGWCRVRSPTRGMKLL 317
N+LL+ K + A L+ +M I++ N++T I+V ++ + +
Sbjct: 361 NVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTF 420
Query: 318 EEM-IQLGHRP---DNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPT-AKTYAI 372
+++ ++ +P D Y + +C+ GM+TEA F +G + S P A ++
Sbjct: 421 KKVGSKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFF----AEGVSRSLPADAPSHRA 476
Query: 373 MIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCL-CGKIDEAYKFLEEMGNK 431
MI + +R+++ K++ M+ L V + + G + GK+ E+ + L +MG +
Sbjct: 477 MIDAYLKAERIDDAVKMLDRMVDVN-LRVVADFGARVFGELIKNGKLTESAEVLTKMGER 535
Query: 432 GYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMI 464
PD Y+ +R LCD ++A + G MI
Sbjct: 536 EPKPDPSIYDVVVRGLCDGDALDQAKDIVGEMI 568
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 113/268 (42%), Gaps = 6/268 (2%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMK 315
QP+ + LL L K A+ L+ +M + + E Y L+ + R
Sbjct: 121 QPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFS 180
Query: 316 LLEEMIQLGH-RPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMI 374
+L++M +PD FTY+T L A L++ M + + +P T I++
Sbjct: 181 ILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDER---LITPNTVTQNIVL 237
Query: 375 VTLAQNDRMEECFKLMGYM-ISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGY 433
+ R ++ K++ M +S+ C PDV T I+ GKID + E+ N G
Sbjct: 238 SGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGI 297
Query: 434 PPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFE 493
P+ T+N + + ++ + M +L + TYN +I F ++ D
Sbjct: 298 EPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMEL 357
Query: 494 TWQEMEKRGCNLDTDTYCVMIEGLFNCN 521
T+ +M G DT T+C +I G N
Sbjct: 358 TFDQMRSEGMKADTKTFCCLINGYANAG 385
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 111/262 (42%), Gaps = 5/262 (1%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMK 315
QP++ ++ LL A + + LYK+M ++I N T NI++ G+ RV + K
Sbjct: 192 QPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEK 251
Query: 316 LLEEM-IQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMI 374
+L +M + +PD +T N L + G I +E R G P +T+ I+I
Sbjct: 252 VLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGI---EPETRTFNILI 308
Query: 375 VTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYP 434
+ + ++ +M YM +TY +IIE G ++M ++G
Sbjct: 309 GSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMK 368
Query: 435 PDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFET 494
D T+ C + + + + + + YN +IS + DD
Sbjct: 369 ADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERV 428
Query: 495 WQEMEKRGCNLDTDTYCVMIEG 516
+ M++R C D+ T+ +M+E
Sbjct: 429 YIRMKERQCVCDSRTFEIMVEA 450
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 114/253 (45%), Gaps = 11/253 (4%)
Query: 322 QLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQND 381
Q ++P TY L K+G A LF+ M +G PT + Y ++ +++
Sbjct: 117 QTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGL---EPTVELYTALLAAYTRSN 173
Query: 382 RMEECFKLMGYMIS-SGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTY 440
+++ F ++ M S C PDV TY +++ + D +EM + P+ VT
Sbjct: 174 LIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQ 233
Query: 441 NCFLRVLCDNKKSEEALKLYGRM-IELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEME 499
N L + ++ K+ M + C P V T N+++S+F M D E+W E
Sbjct: 234 NIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKID-MMESWYEKF 292
Query: 500 KR-GCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPY--KKFDSFLIQLSDLG 556
+ G +T T+ ++I G + + + S + E + K ++ P+ +++ + +D+G
Sbjct: 293 RNFGIEPETRTFNILI-GSYGKKRMYDKMSSVMEYMRK-LEFPWTTSTYNNIIEAFADVG 350
Query: 557 DLHAIHKLSDHMR 569
D + D MR
Sbjct: 351 DAKNMELTFDQMR 363
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 114/283 (40%), Gaps = 9/283 (3%)
Query: 296 TYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFM 355
TY L+ + P R KL +EM++ G P Y L Y ++ +I +A + + M
Sbjct: 126 TYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKM 185
Query: 356 RTKGSTISSPTAKTYAIMI---VTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGV 412
K P TY+ ++ V +Q D ++ +K M + + P+ T ++ G
Sbjct: 186 --KSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLIT---PNTVTQNIVLSGY 240
Query: 413 CLCGKIDEAYKFLEEM-GNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPS 471
G+ D+ K L +M + PD+ T N L V + K + Y + P
Sbjct: 241 GRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPE 300
Query: 472 VQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLE 531
+T+N+LI + + D + M K T TY +IE + + +
Sbjct: 301 TRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFD 360
Query: 532 EVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMRKFYNP 574
++ ++G+K K F + ++ G H + KF P
Sbjct: 361 QMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIP 403
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 120/303 (39%), Gaps = 17/303 (5%)
Query: 243 VQKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINT------NAET 296
V K K + + +Q ++ A L+L+ K EG + + I+N +
Sbjct: 585 VNKHDKHEAVLNVSQLDVMALGLMLNLRLK-------EGNLNETKAILNLMFKTDLGSSA 637
Query: 297 YNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMR 356
N ++ + R ++ + + +I+LG R + T T + Y + + EA L+
Sbjct: 638 VNRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLY---- 693
Query: 357 TKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCG 416
+P MI + +E+ + L GC P T ++ + G
Sbjct: 694 LAAGESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRG 753
Query: 417 KIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYN 476
K EA K D V YN ++ + + K + A ++Y RM S+QTYN
Sbjct: 754 KHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYN 813
Query: 477 MLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINK 536
+IS++ D A E + + G LD Y MI K EA SL E+ K
Sbjct: 814 TMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKK 873
Query: 537 GIK 539
GIK
Sbjct: 874 GIK 876
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 99/219 (45%), Gaps = 13/219 (5%)
Query: 319 EMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLA 378
EM+++G PD T L TY + G + + ++ ++ + +S+ Y M+ +L
Sbjct: 213 EMLEVGCEPDAVACGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSV---YNFMLSSLQ 269
Query: 379 QNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIV 438
+ + L M+ G P+ TY ++ G +EA K EM + G+ P+ V
Sbjct: 270 KKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEV 329
Query: 439 TYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEM 498
TY+ + + E+A+ LY M +PS T ++S++++ ++ A + +M
Sbjct: 330 TYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADM 389
Query: 499 EKRGCNLDTDTYCVMIE-----GLFNCNKTEEACSLLEE 532
E+ D ++I GLF+ +A S+ EE
Sbjct: 390 ERNKIPADEVIRGLIIRIYGKLGLFH-----DAQSMFEE 423
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 115/275 (41%), Gaps = 14/275 (5%)
Query: 258 PEINAFNLLLDALCKCCLVEYAEGLY-KKMRKIINTNAETYNILVFGWCRVRSPTRGMK- 315
P + ++DA +C +E A GL+ + K + A T +ILV R R +
Sbjct: 702 PGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTN-RGKHREAEH 760
Query: 316 ----LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYA 371
LE+ I+L D YNT + +AG + A +++E M T G S +TY
Sbjct: 761 ISRTCLEKNIEL----DTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCS---IQTYN 813
Query: 372 IMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNK 431
MI + ++++ ++ SG D Y ++I GK+ EA EM K
Sbjct: 814 TMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKK 873
Query: 432 GYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGA 491
G P +YN +++ ++ E +L M + TY LI ++ E A
Sbjct: 874 GIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEA 933
Query: 492 FETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEA 526
+T ++++G L + ++ L EEA
Sbjct: 934 EKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEA 968
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 92/234 (39%), Gaps = 14/234 (5%)
Query: 303 GWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTI 362
GW +VR MKL QL +RP Y L Y + G I A + F M G
Sbjct: 167 GWRQVRDFFSWMKL-----QLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGC-- 219
Query: 363 SSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGV---CLCGKID 419
P A M+ T A+ R + L + Y ++ + GK+
Sbjct: 220 -EPDAVACGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVI 278
Query: 420 EAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLI 479
+ + EM +G PP+ TY + EEALK +G M L +P TY+ +I
Sbjct: 279 DLWL---EMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVI 335
Query: 480 SMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEV 533
S+ + D + A +++M +G T M+ + +A SL ++
Sbjct: 336 SLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADM 389
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 132/318 (41%), Gaps = 14/318 (4%)
Query: 214 YMKRKNKSTVPVEVLMTIL-----RKYTEKYLTHVQKFAKKKRIRVKTQPEINAFNLLLD 268
+M+ K P V ++IL + + H+ + +K I + T +N L+
Sbjct: 727 FMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTV----GYNTLIK 782
Query: 269 ALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRP 327
A+ + ++ A +Y++M + + +TYN ++ + R + +++ + G
Sbjct: 783 AMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYL 842
Query: 328 DNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECF 387
D Y + Y K G ++EA+ LF M+ KG +P+ Y +M+ A + E
Sbjct: 843 DEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPS---YNMMVKICATSRLHHEVD 899
Query: 388 KLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVL 447
+L+ M +G D++TY +I+ + EA K + + KG P ++ L L
Sbjct: 900 ELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSAL 959
Query: 448 CDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDT 507
EEA + Y +M E P ++ + D + +++M + D
Sbjct: 960 VKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKMIRSSVEDDR 1019
Query: 508 DTYCVMIEGLFNCNKTEE 525
V +E L+ E+
Sbjct: 1020 FVSSV-VEDLYKAVGKEQ 1036
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 111/260 (42%), Gaps = 10/260 (3%)
Query: 245 KFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFG 303
K +++RI + T + +N +L +L K L+ +M + + N TY ++V
Sbjct: 247 KAVQERRILLST----SVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSS 302
Query: 304 WCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTIS 363
+ + +K EM LG P+ TY++ + KAG +A+ L+E MR++G
Sbjct: 303 YAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIV-- 360
Query: 364 SPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYK 423
P+ T A M+ + + + L M + D II G +A
Sbjct: 361 -PSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQS 419
Query: 424 FLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIP-SVQTYNMLISMF 482
EE D TY +V ++ +AL + M++ R IP S Y +++ +
Sbjct: 420 MFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVI-EMMKTRDIPLSRFAYIVMLQCY 478
Query: 483 FEMDDPDGAFETWQEMEKRG 502
++ + D A E ++ + K G
Sbjct: 479 AKIQNVDCAEEAFRALSKTG 498
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 110/256 (42%), Gaps = 31/256 (12%)
Query: 313 GMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAI 372
++ L +M +LG P TYNT + Y AG + +L + M +G+ P +T+ +
Sbjct: 134 AVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNV 193
Query: 373 MIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGK---IDEAYKFLEEMG 429
++ + ++EE ++++ M G PD TY I C K + + +E+M
Sbjct: 194 LVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTI--ATCYVQKGETVRAESEVVEKMV 251
Query: 430 NK-GYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDP 488
K P+ T + C + + L+ RM E+R ++ +N LI+ F E+ D
Sbjct: 252 MKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDR 311
Query: 489 DGAFETW---------QEMEKRG--------------CNLDTD--TYCVMIEGLFNCNKT 523
DG E +E+E G CN+ D TY ++ +
Sbjct: 312 DGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYM 371
Query: 524 EEACSLLEEVINKGIK 539
E+A + +E++ G+K
Sbjct: 372 EKAAQVFKEMVKAGVK 387
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 12/184 (6%)
Query: 310 PTRGMKLLEEMIQLGHRPDNFTYNT---ALDTYCKAGMITEAVDLFEFMRTKGSTISSPT 366
P + + + + GHRP +Y T A+ + G I+ V E TK +I
Sbjct: 61 PHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSI---- 116
Query: 367 AKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLE 426
+ +I +++ ME+ + + M G P +TY +I+G + GK + + + L+
Sbjct: 117 --FFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLD 174
Query: 427 ---EMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFF 483
E GN P+I T+N ++ C KK EEA ++ +M E P TYN + + +
Sbjct: 175 LMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYV 234
Query: 484 EMDD 487
+ +
Sbjct: 235 QKGE 238
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 130/302 (43%), Gaps = 32/302 (10%)
Query: 263 FNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKLLEEMI 321
FN +++A + +E A KM+++ +N TYN L+ G+ P R +LL+ M+
Sbjct: 118 FNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLML 177
Query: 322 QLGH---RPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLA 378
+ G+ P+ T+N + +CK + EA ++ + M G + T T A V
Sbjct: 178 EEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKG 237
Query: 379 QNDRME-ECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDI 437
+ R E E + M ++ P+ T ++ G C G++ + +F+ M ++
Sbjct: 238 ETVRAESEVVEKM--VMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANL 295
Query: 438 VTYNC----FLRVLCDNKKSE-----------EALKLYGR----------MIELRCIPSV 472
V +N F+ V+ + E E ++L G M E V
Sbjct: 296 VVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADV 355
Query: 473 QTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEE 532
TY+ +++ + + A + ++EM K G D Y ++ +G + ++A LLE
Sbjct: 356 ITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLET 415
Query: 533 VI 534
+I
Sbjct: 416 LI 417
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/335 (19%), Positives = 131/335 (39%), Gaps = 65/335 (19%)
Query: 254 VKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM--------------------------- 286
V P I FN+L+ A CK VE A + KKM
Sbjct: 182 VDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVR 241
Query: 287 -----------RKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTA 335
++ N T I+V G+CR G++ + M ++ + +N+
Sbjct: 242 AESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSL 301
Query: 336 LDTYCKA----GM-----------ITEAVDLFEFMRTKGSTIS-------SPTAKTYAIM 373
++ + + G+ E V+L + K ++ TY+ +
Sbjct: 302 INGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTV 361
Query: 374 IVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGY 433
+ + ME+ ++ M+ +G PD Y + +G + +A + LE + +
Sbjct: 362 MNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESR 421
Query: 434 PPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFE 493
P ++V + + C N ++A++++ +M + P+++T+ L+ + E+ P A E
Sbjct: 422 P-NVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEE 480
Query: 494 TWQEMEKRGCNL--DTDTYCVMIEGLFNCNKTEEA 526
Q M RGC + + T+ ++ E T+E+
Sbjct: 481 VLQMM--RGCGVKPENSTFLLLAEAWRVAGLTDES 513
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/320 (20%), Positives = 133/320 (41%), Gaps = 40/320 (12%)
Query: 250 KRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRK-IINTNAETYNILVFGWCRVR 308
K + QP+ A+ ++++ + ++ A L +++ K + ++ TY +L+ G+ ++
Sbjct: 607 KMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMG 666
Query: 309 SPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFM------------- 355
+G + L++M++ G P+ Y + + K G + LF M
Sbjct: 667 MMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYI 726
Query: 356 ------------RTKGSTISSPTAKTYAIMIV----------TLAQNDRMEECFKLMGYM 393
+ K I P + ++ +L +++G
Sbjct: 727 TLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGK- 785
Query: 394 ISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKS 453
+ +P++ + II G C G++DEAY LE M +G P++VTY ++ +
Sbjct: 786 VKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDI 845
Query: 454 EEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVM 513
E A+ L+ C P Y+ L+ + P A EM+K G N + D+Y +
Sbjct: 846 ESAIDLFEGT---NCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKL 902
Query: 514 IEGLFNCNKTEEACSLLEEV 533
++ L T EA +++++
Sbjct: 903 LQCLCYSRLTMEAVKVVKDM 922
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 86/188 (45%), Gaps = 6/188 (3%)
Query: 278 YAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALD 337
+A + K++K I N +N ++ G+C LE M + G P+ TY +
Sbjct: 778 FAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMK 837
Query: 338 TYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSG 397
++ +AG I A+DLFE T P Y+ ++ L R + LM M SG
Sbjct: 838 SHIEAGDIESAIDLFE------GTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSG 891
Query: 398 CLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEAL 457
P+ +Y+ +++ +C EA K +++M P + + + +LC+ KK EA
Sbjct: 892 INPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREAR 951
Query: 458 KLYGRMIE 465
L+ M++
Sbjct: 952 ALFAIMVQ 959
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 121/292 (41%), Gaps = 37/292 (12%)
Query: 297 YNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMR 356
+N L+ G+ ++ +G + +MI+ G + + FTY+ + +YCK G + A+ LF +
Sbjct: 310 FNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLF--VN 367
Query: 357 TKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCG 416
GS S Y +I + M++ L+ M+ +G +PD TY +++ + C
Sbjct: 368 NTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCH 427
Query: 417 KIDEAYKFLEEMGNKG---YPPDI--------------------------VTYNCFLRVL 447
++ A L+ + + G PP I V L
Sbjct: 428 ELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTAL 487
Query: 448 CDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFE---MDDPDGAFETWQEMEKRGCN 504
C + AL +M+ L C P +YN +I F+ ++D QE++
Sbjct: 488 CSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVP-- 545
Query: 505 LDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLG 556
D DTY +++ L N + A ++++ + G++ + S + L G
Sbjct: 546 -DVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQG 596
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 99/267 (37%), Gaps = 38/267 (14%)
Query: 287 RKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTAL---------- 336
RK N A ++ C R+ + +E+M+ LG P F+YN+ +
Sbjct: 470 RKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIE 529
Query: 337 ------------------DTY-------CKAGMITEAVDLFEFMRTKGSTISSPTAKTYA 371
DTY CK A + + M G PT Y+
Sbjct: 530 DLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGL---RPTVAIYS 586
Query: 372 IMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNK 431
+I +L + R+ E + M+ SG PD Y +I G+IDEA + +EE+
Sbjct: 587 SIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKH 646
Query: 432 GYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGA 491
P TY + E+ + +M+E P+V Y LI F + D +
Sbjct: 647 FLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFS 706
Query: 492 FETWQEMEKRGCNLDTDTYCVMIEGLF 518
F + M + D Y ++ GL+
Sbjct: 707 FTLFGLMGENDIKHDHIAYITLLSGLW 733
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 121/296 (40%), Gaps = 23/296 (7%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLY--KKMRKIINTNAETYNILVFGWCRVRS 309
I+ Q + +++++ + CK V+YA L+ + I+ N Y L+FG+ +
Sbjct: 334 IKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGG 393
Query: 310 PTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKT 369
+ + LL M+ G PD+ TY L K + A+ + + + G I+ P
Sbjct: 394 MDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDD 453
Query: 370 YAIMIVT----LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKID--EAYK 423
+ V L + R + +G + VTT LC + + A
Sbjct: 454 LGNIEVKVESLLGEIARKDANLAAVGLAV-------VTT--------ALCSQRNYIAALS 498
Query: 424 FLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFF 483
+E+M N G P +YN ++ L E+ L + EL +P V TY ++++
Sbjct: 499 RIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELC 558
Query: 484 EMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
+ +D D AF ME+ G Y +I L + EA +++ GI+
Sbjct: 559 KKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQ 614
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 92/226 (40%), Gaps = 4/226 (1%)
Query: 290 INTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAV 349
I ++ + +VF ++R L+ +I G+ P + + +D C EA
Sbjct: 127 IVPDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAF 186
Query: 350 DLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLP-DVTTYKDI 408
FE ++ +GS + K + L + + E ++ + +P V YK +
Sbjct: 187 HCFEQVKERGSGLWLWCCKR---LFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSL 243
Query: 409 IEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRC 468
C G EA + M GY D V Y C ++ C + A++LY RM+E
Sbjct: 244 FYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSF 303
Query: 469 IPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMI 514
+N LI F ++ D + +M K+G + TY +MI
Sbjct: 304 ELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMI 349
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 6/158 (3%)
Query: 327 PDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEEC 386
P+ + +NT + YC AG + EA + E M+ +G P TY I++ + + +E
Sbjct: 792 PNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIV---PNLVTYTILMKSHIEAGDIESA 848
Query: 387 FKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRV 446
L + C PD Y +++G+C + +A + EM G P+ +Y L+
Sbjct: 849 IDLFE---GTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQC 905
Query: 447 LCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFE 484
LC ++ + EA+K+ M L P + LI + E
Sbjct: 906 LCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCE 943
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/279 (20%), Positives = 115/279 (41%), Gaps = 8/279 (2%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMK 315
+P + ++ ++ +L K V AE + KM I + Y I++ + R +
Sbjct: 579 RPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANE 638
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
L+EE+++ RP +FTY + + K GM+ + + M G SP Y +I
Sbjct: 639 LVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDG---LSPNVVLYTALIG 695
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
+ + F L G M + D Y ++ G+ + + + E G +
Sbjct: 696 HFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQ 755
Query: 436 DIVTYNCFLRV---LCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAF 492
++ + + L + A+++ G+ ++ IP++ +N +I+ + D A+
Sbjct: 756 RLIRTKPLVSIPSSLGNYGSKSFAMEVIGK-VKKSIIPNLYLHNTIITGYCAAGRLDEAY 814
Query: 493 ETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLE 531
+ M+K G + TY ++++ E A L E
Sbjct: 815 NHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFE 853
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 77/162 (47%), Gaps = 2/162 (1%)
Query: 298 NILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRT 357
N ++F + R + + +L+EM + +PD TYN+ LD +AG++ E + + M+
Sbjct: 181 NRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKE 240
Query: 358 KGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGK 417
S S TY ++ + + R + C + M+ G PD+ +Y +I+ + G
Sbjct: 241 DCSV--SVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGN 298
Query: 418 IDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKL 459
+ E+ + +EM + P + Y + L + + AL+L
Sbjct: 299 VKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQL 340
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 66/135 (48%), Gaps = 5/135 (3%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMRK--IINTNAETYNILVFGWCRVRSPTRGM 314
+P++ +N +LD L + LV G+ M++ ++ N TYN ++ G + +
Sbjct: 209 KPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCL 268
Query: 315 KLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMI 374
+ EM+Q G PD +Y +D+ ++G + E++ LF+ M+ + P+ Y +I
Sbjct: 269 VIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQ---IRPSVYVYRALI 325
Query: 375 VTLAQNDRMEECFKL 389
L ++ + +L
Sbjct: 326 DCLKKSGDFQSALQL 340
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 106/261 (40%), Gaps = 38/261 (14%)
Query: 297 YNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMR 356
Y+I+V+ + K+ +EM+Q G ++F Y + C+ G + EA L M
Sbjct: 307 YSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEME 366
Query: 357 TKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCG 416
G SP +T+ +I A+ E+ + M++ G +P + + ++++ V
Sbjct: 367 ESGV---SPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIE 423
Query: 417 KIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYN 476
++ A + L + +KG+ PD TY+
Sbjct: 424 NVNRANEILTKSIDKGFVPD-----------------------------------EHTYS 448
Query: 477 MLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINK 536
LI F E +D D A + + EME R + + + +I GL C K E L+ + +
Sbjct: 449 HLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKR 508
Query: 537 GIKLPYKKFDSFLIQLSDLGD 557
I+ +D+ + +GD
Sbjct: 509 LIEPNADIYDALIKAFQKIGD 529
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 95/214 (44%), Gaps = 5/214 (2%)
Query: 286 MRKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMI 345
+++ + N+ Y + V C +LL EM + G P + T+N + + + G
Sbjct: 331 LQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWE 390
Query: 346 TEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTY 405
+ ++ E M T+G P+ + M+ ++++ + + +++ I G +PD TY
Sbjct: 391 EKGLEYCEVMVTRGLM---PSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTY 447
Query: 406 KDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIE 465
+I G ID+A K EM + P + + LC K E K Y ++++
Sbjct: 448 SHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEK-YLKIMK 506
Query: 466 LRCI-PSVQTYNMLISMFFEMDDPDGAFETWQEM 498
R I P+ Y+ LI F ++ D A + EM
Sbjct: 507 KRLIEPNADIYDALIKAFQKIGDKTNADRVYNEM 540
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 91/207 (43%), Gaps = 4/207 (1%)
Query: 262 AFNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKLLEEM 320
+ + + C+ V+ AE L +M + ++ ET+N L+ G+ R +G++ E M
Sbjct: 341 VYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVM 400
Query: 321 IQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQN 380
+ G P +N + + K + A ++ KG P TY+ +I +
Sbjct: 401 VTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFV---PDEHTYSHLIRGFIEG 457
Query: 381 DRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTY 440
+ +++ KL M P ++ +I G+C CGK++ K+L+ M + P+ Y
Sbjct: 458 NDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIY 517
Query: 441 NCFLRVLCDNKKSEEALKLYGRMIELR 467
+ ++ A ++Y MI +R
Sbjct: 518 DALIKAFQKIGDKTNADRVYNEMISVR 544
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 93/461 (20%), Positives = 171/461 (37%), Gaps = 61/461 (13%)
Query: 146 AIPLSTPLVTGVLHRLRYDE--KIAFRFFTWAGNQENYSHEPCAYNDMMDILSSTKYKVK 203
+I LS L+ +L R + E K A FF W+ + N H +Y + IL
Sbjct: 72 SIDLSDSLIETILLRFKNPETAKQALSFFHWSSHTRNLRHGIKSYALTIHILVKA----- 126
Query: 204 QFRIVCDMLDYMKRKNKSTVP-VEVLMTILRKYTEKYLTHVQKFAKKKRIRVKTQPEINA 262
R++ D ++ ++ P +++ ++L Y T +
Sbjct: 127 --RLLIDARALIESSLLNSPPDSDLVDSLLDTYEISSSTPL------------------V 166
Query: 263 FNLLLDALCKCCLVEYAEGLYKKMRKI-INTNAETYNILVFGWCRVRSPTRGMKLLEEMI 321
F+LL+ K +E ++K++ + T N L+ + + ++ E I
Sbjct: 167 FDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAI 226
Query: 322 QLGHRPDNFTYNTALDTYCKAGMITEAVDLF-----------------------EFMRTK 358
P+ T + CK G + E VDL E MR +
Sbjct: 227 DKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIE 286
Query: 359 GST-------ISSPTAKT--YAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDII 409
S + + T Y+I++ A+ + K+ M+ G + Y +
Sbjct: 287 ESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFV 346
Query: 410 EGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCI 469
C G + EA + L EM G P T+NC + E+ L+ M+ +
Sbjct: 347 RVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLM 406
Query: 470 PSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSL 529
PS +N ++ ++++ + A E + +G D TY +I G N ++A L
Sbjct: 407 PSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKL 466
Query: 530 LEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMRK 570
E+ + + ++ F S ++ L G + A K M+K
Sbjct: 467 FYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKK 507
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 76/175 (43%), Gaps = 16/175 (9%)
Query: 328 DNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECF 387
D YN + CKAG EA ++F + G P +TY +MI + R E
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGL---QPDVQTYNMMI-RFSSLGRAE--- 65
Query: 388 KLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVL 447
KL MI G +PD TY +I G+C K+ +A K T+N +
Sbjct: 66 KLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV---------SKSCSTFNTLINGY 116
Query: 448 CDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRG 502
C + ++ + L+ M + +V TY LI F ++ D + A + +QEM G
Sbjct: 117 CKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNG 171
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 85/202 (42%), Gaps = 16/202 (7%)
Query: 351 LFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIE 410
+F+ MR S + TA Y I+I L + + +E + ++ SG PDV TY +I
Sbjct: 1 MFKVMRE--SNMDMDTAG-YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR 57
Query: 411 GVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIP 470
+ A K EM +G PD +TYN + LC K +A K+
Sbjct: 58 ----FSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVS---------K 104
Query: 471 SVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLL 530
S T+N LI+ + + + EM +RG + TY +I G A +
Sbjct: 105 SCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIF 164
Query: 531 EEVINKGIKLPYKKFDSFLIQL 552
+E+++ G+ F L QL
Sbjct: 165 QEMVSNGVYSSSITFRDILPQL 186
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 17/199 (8%)
Query: 262 AFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMKLLEEM 320
+N+++ LCK + A ++ + + + +TYN+++ R S R KL EM
Sbjct: 16 GYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKLYAEM 71
Query: 321 IQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQN 380
I+ G PD TYN+ + CK + +A + S + T+ +I +
Sbjct: 72 IRRGLVPDTITYNSMIHGLCKQNKLAQARKV------------SKSCSTFNTLINGYCKA 119
Query: 381 DRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTY 440
R+++ L M G + +V TY +I G G + A +EM + G +T+
Sbjct: 120 TRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITF 179
Query: 441 NCFLRVLCDNKKSEEALKL 459
L LC K+ +A+ +
Sbjct: 180 RDILPQLCSRKELRKAVAM 198
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 16/182 (8%)
Query: 349 VDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDI 408
++LF M +G ++ T T + D +E FK M+S G PD+ TY +
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFK---EMVSDGVPPDIMTYNIL 57
Query: 409 IEGVC---------LCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKL 459
++G+C + GK+++ + + KG P++VTY + C EEA L
Sbjct: 58 LDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTL 117
Query: 460 YGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNL--DTDTYCVMIEGL 517
+ +M E +P TYN LI D + E +EM R C D TY ++ + L
Sbjct: 118 FRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM--RSCRFAGDASTYGLVTDML 175
Query: 518 FN 519
+
Sbjct: 176 HD 177
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 11/151 (7%)
Query: 393 MISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKK 452
M G + + TY +I+G+ G D A + +EM + G PPDI+TYN L LC N K
Sbjct: 7 MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGK 66
Query: 453 SEEALKLYGRM---------IELRCI-PSVQTYNMLISMFFEMDDPDGAFETWQEMEKRG 502
E+AL + G++ + L+ + P+V TY +IS F + + A+ +++M++ G
Sbjct: 67 LEKAL-VAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDG 125
Query: 503 CNLDTDTYCVMIEGLFNCNKTEEACSLLEEV 533
D+ TY +I + L++E+
Sbjct: 126 PLPDSGTYNTLIRAHLRDGDKAASAELIKEM 156
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 79/181 (43%), Gaps = 14/181 (7%)
Query: 314 MKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIM 373
M+L EM Q G + TY T + +AG A ++F+ M + G P TY I+
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGV---PPDIMTYNIL 57
Query: 374 IVTLAQNDRMEEC---------FKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKF 424
+ L +N ++E+ + L + G P+V TY +I G C G +EAY
Sbjct: 58 LDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTL 117
Query: 425 LEEMGNKGYPPDIVTYNCFLRV-LCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFF 483
+M G PD TYN +R L D K+ A +L M R TY ++ M
Sbjct: 118 FRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASA-ELIKEMRSCRFAGDASTYGLVTDMLH 176
Query: 484 E 484
+
Sbjct: 177 D 177
>AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5213290-5215296 FORWARD
LENGTH=668
Length = 668
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/390 (21%), Positives = 158/390 (40%), Gaps = 60/390 (15%)
Query: 122 DKVCNTMMDNLHGFNNLEKALDQLAIPLSTPLVTGVLHRLRYDEKIAFRFFTWAGNQENY 181
D+VC +M G +++EK + L + + LV ++ RL + + A FF W + +
Sbjct: 225 DRVCKIVMKEEWG-DDVEKRVRDLNVEFKSDLVKMIVERLDVEPRKALLFFRWIDESDLF 283
Query: 182 SHEPCAYNDMMDILSSTK----------------YKVK------------QFRIVCDMLD 213
H+ YN M +L K Y+V+ Q +++ + +D
Sbjct: 284 KHDEKTYNAMARVLGKEKFLDRFQNIVVEMRSAGYEVEIETYVRVSTRFCQTKLIKEAVD 343
Query: 214 Y----MKRKNKSTVPV-EVLMTILRKYTEKYLTHVQKFAKKKRIRVKTQPEINAFNLLLD 268
M + S P +L+K + + F++ ++ K N L D
Sbjct: 344 LFEIAMAGSSSSNNPTPHCFCLLLKKIVTAKILDMDLFSRAVKVYTKNG------NALTD 397
Query: 269 ALCKCCL--------VEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKLLEE 319
+L K L VE + L K+M R + + +++ R + ++
Sbjct: 398 SLLKSVLKSLRSVDRVEQSNELLKEMKRGGYVPSGDMQSMIASSLSRKGKKDEADEFVDF 457
Query: 320 MIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQ 379
M G+ D+ + ++ YC +G + EA+ FE M G+T S ++ +++
Sbjct: 458 MESSGNNLDDKAMASLVEGYCDSGNLDEALVCFEKM--VGNTGVSYADYSFEKLVLAYCN 515
Query: 380 NDRMEECFKLMGYMISSGCL-PDVTTYKDII-----EGVCLCGKIDEAYKFLEEMGNKGY 433
+++ + +KL+ ++ L P +TYK ++ + + G +EA L M + G+
Sbjct: 516 KNQVRDAYKLLSAQVTKNQLKPRHSTYKSLVTNLLTKKIARDGGFEEALSLLPIMKDHGF 575
Query: 434 PPDIVTYNCFLRVLCDNKKSEEALKLYGRM 463
PP I + F+ KS EAL M
Sbjct: 576 PPFI---DPFMSYFSSTGKSTEALGFLKAM 602
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 98/248 (39%), Gaps = 46/248 (18%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPT 311
IR Q I + L+D CKC + YA+ ++ +M++ N ++ +V G+ +
Sbjct: 297 IRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQ---KNVVSWTAMVVGYGQTGRAE 353
Query: 312 RGMKLLEEMIQLGHRPDNFTYNTALDT--------------------------------- 338
+K+ +M + G PD++T A+
Sbjct: 354 EAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLV 413
Query: 339 --YCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISS 396
Y K G I ++ LF M + A ++ M+ AQ R E +L M+
Sbjct: 414 TLYGKCGDIDDSTRLFNEMNVR-------DAVSWTAMVSAYAQFGRAVETIQLFDKMVQH 466
Query: 397 GCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNK-GYPPDIVTYNCFLRVLCDNKKSEE 455
G PD T +I G +++ ++ + M ++ G P I Y+C + + + + EE
Sbjct: 467 GLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEE 526
Query: 456 ALKLYGRM 463
A++ M
Sbjct: 527 AMRFINGM 534
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/289 (20%), Positives = 112/289 (38%), Gaps = 39/289 (13%)
Query: 263 FNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQ 322
+N L+ L C ++E A L++ M K ++ ++ ++ G + ++ EM
Sbjct: 208 YNSLMGGLLACGMIEDALQLFRGMEK----DSVSWAAMIKGLAQNGLAKEAIECFREMKV 263
Query: 323 LGHRPDNFTYNTALDTYCKAGMITEAVDLFE-FMRTK-------GSTISSPTAKT----Y 370
G + D + + + L G I E + +RT GS + K Y
Sbjct: 264 QGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHY 323
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGN 430
A + DRM++ +V ++ ++ G G+ +EA K +M
Sbjct: 324 AKTVF-----DRMKQ--------------KNVVSWTAMVVGYGQTGRAEEAVKIFLDMQR 364
Query: 431 KGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDG 490
G PD T + + EE + +G+ I I V N L++++ + D D
Sbjct: 365 SGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDD 424
Query: 491 AFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
+ + EM R D ++ M+ + E L ++++ G+K
Sbjct: 425 STRLFNEMNVR----DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLK 469
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 336 LDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMIS 395
LD CK G++ EA+ LF MR KG+ P Y ++ + ++E+ ++ M +
Sbjct: 138 LDGLCKDGLVQEAMKLFGLMRDKGTI---PEVVIYTAVVEAFCKAHKIEDAKRIFRKMQN 194
Query: 396 SGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEE 455
+G P+ +Y +++G+ C +D+A F EM G+ P++ T+ + LC K E+
Sbjct: 195 NGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQ 254
Query: 456 A 456
A
Sbjct: 255 A 255
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 76/166 (45%), Gaps = 3/166 (1%)
Query: 384 EECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCF 443
E+ ++ M G +P+ +++G+C G + EA K M +KG P++V Y
Sbjct: 116 EDSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAV 172
Query: 444 LRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGC 503
+ C K E+A +++ +M P+ +Y +L+ + + D A EM + G
Sbjct: 173 VEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGH 232
Query: 504 NLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFL 549
+ + T+ +++ L E+A S ++ + KG + K F+
Sbjct: 233 SPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFM 278
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 277 EYAEGLYKKMRK---IINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYN 333
E ++ ++KKM++ I N A ++ G C+ MKL M G P+ Y
Sbjct: 116 EDSDEIFKKMKEGGLIPNAVA-----MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYT 170
Query: 334 TALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYM 393
++ +CKA I +A +F M+ G +P A +Y +++ L + +++ M
Sbjct: 171 AVVEAFCKAHKIEDAKRIFRKMQNNGI---APNAFSYGVLVQGLYNCNMLDDAVAFCSEM 227
Query: 394 ISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGY 433
+ SG P+V T+ ++++ +C +++A ++ + KG+
Sbjct: 228 LESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGF 267
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 54/107 (50%)
Query: 373 MIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKG 432
M+ L ++ ++E KL G M G +P+V Y ++E C KI++A + +M N G
Sbjct: 137 MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNG 196
Query: 433 YPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLI 479
P+ +Y ++ L + ++A+ M+E P+V T+ L+
Sbjct: 197 IAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELV 243
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 1/116 (0%)
Query: 256 TQPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGM 314
T PE+ + +++A CK +E A+ +++KM+ I NA +Y +LV G +
Sbjct: 162 TIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAV 221
Query: 315 KLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
EM++ GH P+ T+ +D C+ + +A + + KG ++ K +
Sbjct: 222 AFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEF 277
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 336 LDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMIS 395
LD CK G++ EA+ LF MR KG+ P Y ++ + ++E+ ++ M +
Sbjct: 138 LDGLCKDGLVQEAMKLFGLMRDKGTI---PEVVIYTAVVEAFCKAHKIEDAKRIFRKMQN 194
Query: 396 SGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEE 455
+G P+ +Y +++G+ C +D+A F EM G+ P++ T+ + LC K E+
Sbjct: 195 NGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQ 254
Query: 456 A 456
A
Sbjct: 255 A 255
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 76/166 (45%), Gaps = 3/166 (1%)
Query: 384 EECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCF 443
E+ ++ M G +P+ +++G+C G + EA K M +KG P++V Y
Sbjct: 116 EDSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAV 172
Query: 444 LRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGC 503
+ C K E+A +++ +M P+ +Y +L+ + + D A EM + G
Sbjct: 173 VEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGH 232
Query: 504 NLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFL 549
+ + T+ +++ L E+A S ++ + KG + K F+
Sbjct: 233 SPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEFM 278
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 277 EYAEGLYKKMRK---IINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYN 333
E ++ ++KKM++ I N A ++ G C+ MKL M G P+ Y
Sbjct: 116 EDSDEIFKKMKEGGLIPNAVA-----MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYT 170
Query: 334 TALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYM 393
++ +CKA I +A +F M+ G +P A +Y +++ L + +++ M
Sbjct: 171 AVVEAFCKAHKIEDAKRIFRKMQNNGI---APNAFSYGVLVQGLYNCNMLDDAVAFCSEM 227
Query: 394 ISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGY 433
+ SG P+V T+ ++++ +C +++A ++ + KG+
Sbjct: 228 LESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGF 267
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 54/107 (50%)
Query: 373 MIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKG 432
M+ L ++ ++E KL G M G +P+V Y ++E C KI++A + +M N G
Sbjct: 137 MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNG 196
Query: 433 YPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLI 479
P+ +Y ++ L + ++A+ M+E P+V T+ L+
Sbjct: 197 IAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELV 243
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 1/116 (0%)
Query: 256 TQPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGM 314
T PE+ + +++A CK +E A+ +++KM+ I NA +Y +LV G +
Sbjct: 162 TIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAV 221
Query: 315 KLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY 370
EM++ GH P+ T+ +D C+ + +A + + KG ++ K +
Sbjct: 222 AFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVNVKAVKEF 277
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 96/233 (41%), Gaps = 9/233 (3%)
Query: 267 LDALCKCCLV--EYAEG--LYKKMRKI--INTNAETYNILVFGWCRVRSPTRGMKLLEEM 320
L+AL CL+ +Y E +Y +M K+ I + ETYN ++ C S + ++ EM
Sbjct: 149 LNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEM 208
Query: 321 IQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQN 380
+ +P ++ +D + K E + M G + TY IMI L +
Sbjct: 209 ERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVG---VATYNIMIQCLCKR 265
Query: 381 DRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTY 440
+ E L+ ++S P+ TY +I G C +DEA E M GY PD Y
Sbjct: 266 KKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECY 325
Query: 441 NCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFE 493
+ LC E AL L +E +PS L++ D A E
Sbjct: 326 FTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKE 378
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 74/173 (42%)
Query: 365 PTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKF 424
P +TY MI L ++ + ++ M P ++ +I+G K DE K
Sbjct: 180 PDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKV 239
Query: 425 LEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFE 484
+ M G + TYN ++ LC KKS EA L ++ R P+ TY++LI F
Sbjct: 240 MRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCS 299
Query: 485 MDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKG 537
++ D A ++ M G D++ Y +I L E A L E + K
Sbjct: 300 EENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKN 352
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 84/206 (40%), Gaps = 4/206 (1%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMK 315
+P++ +N ++ LC+ + + +M RK I A ++ +++ G+ + K
Sbjct: 179 EPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRK 238
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
++ M + G TYN + CK EA L + + S P + TY+++I
Sbjct: 239 VMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVM---SCRMRPNSVTYSLLIH 295
Query: 376 TLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPP 435
+ ++E L M+ +G PD Y +I +C G + A E K + P
Sbjct: 296 GFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVP 355
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYG 461
+ L K +EA +L
Sbjct: 356 SFSVMKWLVNGLASRSKVDEAKELIA 381
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 56/104 (53%)
Query: 432 GYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGA 491
G PD+ TYN +RVLC++ + + + M P+ ++ ++I F++ + D
Sbjct: 177 GIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEV 236
Query: 492 FETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVIN 535
+ + M++ G ++ TY +MI+ L K+ EA +L++ V++
Sbjct: 237 RKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMS 280
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 102/240 (42%), Gaps = 5/240 (2%)
Query: 339 YCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISS-G 397
Y KAGM +A+D F M G S K++ + L+ N + ++ + S G
Sbjct: 116 YGKAGMTKQALDTFFNMDLYGCKRS---VKSFNAALQVLSFNPDLHTIWEFLHDAPSKYG 172
Query: 398 CLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEAL 457
D ++ I+ C G +D AY + EM G PD+VTY + L +++
Sbjct: 173 IDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGN 232
Query: 458 KLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGL 517
L+ M+ C P++ T+N+ I A + M K D+ TY ++I+G
Sbjct: 233 GLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGF 292
Query: 518 FNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKL-SDHMRKFYNPAM 576
F + A + + KG K K + + + L G+ + + D MRK + P +
Sbjct: 293 FLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNL 352
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 95/206 (46%), Gaps = 3/206 (1%)
Query: 328 DNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECF 387
D ++N A+ ++C+ G++ A M G T P TY +I L +++R
Sbjct: 176 DAVSFNIAIKSFCELGILDGAYMAMREMEKSGLT---PDVVTYTTLISALYKHERCVIGN 232
Query: 388 KLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVL 447
L M+ GC P++TT+ I+ + + +A L M PD +TYN ++
Sbjct: 233 GLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGF 292
Query: 448 CDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDT 507
+ + A ++Y M P+++ Y +I + + D A+ ++ ++ +
Sbjct: 293 FLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNL 352
Query: 508 DTYCVMIEGLFNCNKTEEACSLLEEV 533
DT ++++GL + ++A S++E V
Sbjct: 353 DTVEMLLKGLVKKGQLDQAKSIMELV 378
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 82/212 (38%), Gaps = 3/212 (1%)
Query: 290 INTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAV 349
I+ +A ++NI + +C + + EM + G PD TY T + K
Sbjct: 173 IDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGN 232
Query: 350 DLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDII 409
L+ M KG P T+ + I L R + L+ M PD TY +I
Sbjct: 233 GLWNLMVLKGC---KPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVI 289
Query: 410 EGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCI 469
+G L D A + M KGY P++ Y + LC + A + + +
Sbjct: 290 KGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWY 349
Query: 470 PSVQTYNMLISMFFEMDDPDGAFETWQEMEKR 501
P++ T ML+ + D A + + +R
Sbjct: 350 PNLDTVEMLLKGLVKKGQLDQAKSIMELVHRR 381
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 128/301 (42%), Gaps = 57/301 (18%)
Query: 262 AFNLLLDALCKCCLVEYAEGLYKKM--RKIINTNAETYNILVFGWCRVRSPTRGMKLLEE 319
++N ++ + E A L+ +M R ++ ++N+++ G+ R R+ + +L E
Sbjct: 97 SYNGMISGYLRNGEFELARKLFDEMPERDLV-----SWNVMIKGYVRNRNLGKARELFEI 151
Query: 320 MIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQ 379
M + D ++NT L Y + G + +A +F+ M K ++ ++ Q
Sbjct: 152 MPE----RDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDV-------SWNALLSAYVQ 200
Query: 380 NDRMEECFKLM-----GYMISSGCL----------------------PDVTTYKDIIEGV 412
N +MEE L ++S CL DV ++ II G
Sbjct: 201 NSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGY 260
Query: 413 CLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSV 472
GKIDEA + +E D+ T+ + N+ EEA +L+ +M E +
Sbjct: 261 AQSGKIDEARQLFDE----SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEV--- 313
Query: 473 QTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEE 532
++N +++ + + + + A E + M R + T+ MI G C K EA +L ++
Sbjct: 314 -SWNAMLAGYVQGERMEMAKELFDVMPCR----NVSTWNTMITGYAQCGKISEAKNLFDK 368
Query: 533 V 533
+
Sbjct: 369 M 369
>AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=978
Length = 978
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 118/268 (44%), Gaps = 19/268 (7%)
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLF-EFMRTKGSTISSPTAKTYAIMI 374
+L+++ Q G +P TY ++ + E +L EF R K S P A Y +++
Sbjct: 615 VLQQLKQRGQKPSPVTYGLIMEVM----LACEKYNLVHEFFR-KMQKSSIPNALAYRVLV 669
Query: 375 VTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYP 434
TL + + +E + M S G + Y D+ +C G+ +E L+++
Sbjct: 670 NTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEGLNMLKKICRVANK 729
Query: 435 PDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFET 494
P +VTY ++ D+ + A ++ +M ++ C P++ T N+++ + + + A E
Sbjct: 730 PLVVTYTGLIQACVDSGNIKNAAYIFDQMKKV-CSPNLVTCNIMLKAYLQGGLFEEAREL 788
Query: 495 WQEMEKRGCNL------------DTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPY 542
+Q+M + G ++ DT T+ M++ K ++ E++ G
Sbjct: 789 FQKMSEDGNHIKNSSDFESRVLPDTYTFNTMLDTCAEQEKWDDFGYAYREMLRHGYHFNA 848
Query: 543 KKFDSFLIQLSDLGDLHAIHKLSDHMRK 570
K+ +++ S G + +HMR+
Sbjct: 849 KRHLRMVLEASRAGKEEVMEATWEHMRR 876
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 114/264 (43%), Gaps = 26/264 (9%)
Query: 332 YNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMG 391
Y TAL+ K+ EA+++F M + S S P Y + VTL Q ++E F ++
Sbjct: 510 YTTALNVLGKSRRPVEALNVFHAMLLQIS--SYPDMVAYRSIAVTLGQAGHIKELFYVID 567
Query: 392 YMISS---------------GCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
M S PDV Y ++ + + A+ L+++ +G P
Sbjct: 568 TMRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPS 627
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQ 496
VTY + V+ +K + + R ++ IP+ Y +L++ ++ D A T +
Sbjct: 628 PVTYGLIMEVMLACEKYNLVHEFF-RKMQKSSIPNALAYRVLVNTLWKEGKSDEAVHTVE 686
Query: 497 EMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEE---VINKGIKLPYKKFDSFLIQL- 552
+ME RG Y + L + + E ++L++ V NK + + Y + LIQ
Sbjct: 687 DMESRGIVGSAALYYDLARCLCSAGRCNEGLNMLKKICRVANKPLVVTY----TGLIQAC 742
Query: 553 SDLGDLHAIHKLSDHMRKFYNPAM 576
D G++ + D M+K +P +
Sbjct: 743 VDSGNIKNAAYIFDQMKKVCSPNL 766
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 95/208 (45%), Gaps = 4/208 (1%)
Query: 333 NTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT-LAQNDRMEECFKLMG 391
N+ L K G + + LF+ M+ G P TY ++ + + + +L+G
Sbjct: 170 NSILSCLVKNGKLDSCIKLFDQMKRDGL---KPDVVTYNTLLAGCIKVKNGYPKAIELIG 226
Query: 392 YMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNK 451
+ +G D Y ++ G+ +EA F+++M +G+ P+I Y+ L
Sbjct: 227 ELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKG 286
Query: 452 KSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYC 511
++A +L M + +P+ L+ ++ + D + E E+E G + YC
Sbjct: 287 DYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYC 346
Query: 512 VMIEGLFNCNKTEEACSLLEEVINKGIK 539
++++GL K EEA S+ +++ KG++
Sbjct: 347 MLMDGLSKAGKLEEARSIFDDMKGKGVR 374
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 100/248 (40%), Gaps = 38/248 (15%)
Query: 317 LEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVT 376
+++M GH P+ + Y++ L++Y G +A +L M++ G + T + +
Sbjct: 260 IQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIK 319
Query: 377 LAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
DR E L+ + S+G + Y +++G+ GK++EA ++M KG D
Sbjct: 320 GGLFDRSRE---LLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSD 376
Query: 437 IVTYNCFLRVLCDNKKSEEA-----------------------------------LKLYG 461
+ + LC +K+ +EA +++
Sbjct: 377 GYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMK 436
Query: 462 RMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCN 521
+M E P T+++LI F + A++T +M +G L+ + +I L
Sbjct: 437 KMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEEELCSSLIYHLGKIR 496
Query: 522 KTEEACSL 529
EA S+
Sbjct: 497 AQAEAFSV 504
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 118/286 (41%), Gaps = 23/286 (8%)
Query: 265 LLLDALCKCC--LVEYAEGLYKKMRKIIN---------TNAETYNILVFGWCRVRSPTRG 313
LLL + KC L Y K+R+I ++AE L+F + SP
Sbjct: 10 LLLPMVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPP- 68
Query: 314 MKLLEEMIQLGHRPDN-FTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAI 372
M ++ +P N F +NT + Y + G A L+ MR G + P TY
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSG--LVEPDTHTYPF 126
Query: 373 MI--VTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGN 430
+I VT + R+ E + +I SG + ++ CG + AYK ++M
Sbjct: 127 LIKAVTTMADVRLGET--IHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPE 184
Query: 431 KGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDG 490
K D+V +N + +N K EEAL LY M P T L+S ++
Sbjct: 185 K----DLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTL 240
Query: 491 AFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINK 536
M K G + + V+++ C + EEA +L +E+++K
Sbjct: 241 GKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDK 286
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 106/238 (44%), Gaps = 13/238 (5%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMK 315
+ ++ A+N +++ + E A LY +M K I + T L+ ++ + T G +
Sbjct: 184 EKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKR 243
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
+ MI++G + + N LD Y + G + EA LF+ M K S ++ +IV
Sbjct: 244 VHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSV-------SWTSLIV 296
Query: 376 TLAQNDRMEECFKLMGYMISS-GCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNK-GY 433
LA N +E +L YM S+ G LP T+ I+ CG + E +++ M +
Sbjct: 297 GLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKI 356
Query: 434 PPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGA 491
P I + C + +L ++ + K Y + + P+V + L+ D D A
Sbjct: 357 EPRIEHFGCMVDLLA---RAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 411
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 111/279 (39%), Gaps = 21/279 (7%)
Query: 273 CCLVEYAEGL---YKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDN 329
C L + EGL + I N +N + G P +KL MI LG P++
Sbjct: 75 CILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNS 134
Query: 330 FTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKL 389
+T+ L + K+ E + + G + + +I QN R+E+ K+
Sbjct: 135 YTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLD---LYVHTSLISMYVQNGRLEDAHKV 191
Query: 390 MGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCD 449
DV +Y +I+G G I+ A K +E+ K D+V++N + +
Sbjct: 192 F----DKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVK----DVVSWNAMISGYAE 243
Query: 450 NKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDT 509
+EAL+L+ M++ P T ++S + + + ++ G +
Sbjct: 244 TGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKI 303
Query: 510 YCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSF 548
+I+ C + E AC L E +LPYK S+
Sbjct: 304 VNALIDLYSKCGELETACGLFE-------RLPYKDVISW 335
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/260 (19%), Positives = 110/260 (42%), Gaps = 15/260 (5%)
Query: 267 LDALCKCCLVEYAEGLYKKMRKII--NTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLG 324
L L C ++ ++ +M KI NTN ++ F C + G+ + +
Sbjct: 37 LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEF--CILSPHFEGLPYAISVFKTI 94
Query: 325 HRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRME 384
P+ +NT + + A+ L+ M + G P + T+ ++ + A++ +
Sbjct: 95 QEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLL---PNSYTFPFVLKSCAKSKAFK 151
Query: 385 ECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFL 444
E ++ G+++ GC D+ + +I G++++A+K ++ ++ D+V+Y +
Sbjct: 152 EGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHR----DVVSYTALI 207
Query: 445 RVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCN 504
+ E A KL+ + + V ++N +IS + E + A E +++M K
Sbjct: 208 KGYASRGYIENAQKLFDEI----PVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 263
Query: 505 LDTDTYCVMIEGLFNCNKTE 524
D T ++ E
Sbjct: 264 PDESTMVTVVSACAQSGSIE 283
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 93/240 (38%), Gaps = 45/240 (18%)
Query: 260 INAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLEE 319
+ A+ ++ K VE AE ++K M +N N T+N ++ G+ P G+KL
Sbjct: 217 VVAWTAMITGYMKAKKVELAEAMFKDM--TVNKNLVTWNAMISGYVENSRPEDGLKLFRA 274
Query: 320 MIQLGHRPDNFTYNTAL-----------------------------------DTYCKAGM 344
M++ G RP++ ++AL YCK G
Sbjct: 275 MLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGE 334
Query: 345 ITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTT 404
+ +A LFE M+ K + MI AQ+ ++ L MI + PD T
Sbjct: 335 LGDAWKLFEVMKKKDVV-------AWNAMISGYAQHGNADKALCLFREMIDNKIRPDWIT 387
Query: 405 YKDIIEGVCLCGKIDEAYKFLEEM-GNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRM 463
+ ++ G ++ + E M + P Y C + +L K EEALKL M
Sbjct: 388 FVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSM 447
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/283 (19%), Positives = 121/283 (42%), Gaps = 39/283 (13%)
Query: 269 ALCKCCLVEYAE-GLYKKMRKIINT----NAETYNILVFGWCRVRSPTRGMKLLEEMIQL 323
++C +V Y+ G + RK+ N+ N ++N ++ + ++ + LL+EM
Sbjct: 125 SMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEIC 184
Query: 324 GHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRM 383
G +PD T+N+ L Y G+ +A+ + + M+ G P+ + + ++ +A+ +
Sbjct: 185 GLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGL---KPSTSSISSLLQAVAEPGHL 241
Query: 384 EECFKLMGYM-------------------ISSGCLP------------DVTTYKDIIEGV 412
+ + GY+ I +G LP ++ + ++ G+
Sbjct: 242 KLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGL 301
Query: 413 CLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSV 472
+ +A + M +G PD +T+N K E+AL + G+M E P+V
Sbjct: 302 SYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNV 361
Query: 473 QTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIE 515
++ + S + + A + + +M++ G + T +++
Sbjct: 362 VSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLK 404
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 96/223 (43%), Gaps = 8/223 (3%)
Query: 260 INAFNLLLDALCKCCLVEYAEGLYKKMRK-IINTNAETYNILVFGWCRVRSPTRGMKLLE 318
I A+N L+ L CL++ AE L +M K I +A T+N L G+ + P + + ++
Sbjct: 291 IVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIG 350
Query: 319 EMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLA 378
+M + G P+ ++ K G A+ +F M+ +G P A T + ++ L
Sbjct: 351 KMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEG---VGPNAATMSTLLKILG 407
Query: 379 QNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIV 438
+ ++ G+ + + D +++ G + A + + NK +
Sbjct: 408 CLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNK----SLA 463
Query: 439 TYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISM 481
++NC L + EE + + M+E P T+ ++S+
Sbjct: 464 SWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSV 506
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 7/155 (4%)
Query: 328 DNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECF 387
D + T +D Y K G + A +F+ M K + ++ L+ +++
Sbjct: 259 DVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIV-------AWNSLVSGLSYACLLKDAE 311
Query: 388 KLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVL 447
LM M G PD T+ + G GK ++A + +M KG P++V++
Sbjct: 312 ALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGC 371
Query: 448 CDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMF 482
N ALK++ +M E P+ T + L+ +
Sbjct: 372 SKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKIL 406
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 98/245 (40%), Gaps = 50/245 (20%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKM--RKIINTNAETYNILVFGWCRVRSPTRGM 314
Q ++ +N+L+D L K + A L+ M R ++ ++N L+ G+ ++ +
Sbjct: 180 QRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLV-----SWNSLISGYAQMNHCREAI 234
Query: 315 KLLEEMIQLGHRPDN-----------------------------------FTYNTALDTY 339
KL +EM+ LG +PDN F +D Y
Sbjct: 235 KLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFY 294
Query: 340 CKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCL 399
K G I A+++FE S T T+ MI LA + E M+SSG
Sbjct: 295 AKCGFIDTAMEIFEL-------CSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIK 347
Query: 400 PDVTTYKDIIEGVCLCGKIDEAYKFLEEMGN-KGYPPDIVTYNCFLRVLCDNKKSEEALK 458
PD T+ ++ G G +DEA ++M + ++ Y C +L EEA +
Sbjct: 348 PDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAE 407
Query: 459 LYGRM 463
+ +M
Sbjct: 408 MIEQM 412
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 100/240 (41%), Gaps = 42/240 (17%)
Query: 332 YNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMG 391
+N+ + Y G +E V++FE+M+ I KT + ++ L + D+ME
Sbjct: 142 FNSMIMVYSDNGKFSEVVEVFEYMKNNEVKIDE---KTCTLHLLNLKRCDQMELARDFFS 198
Query: 392 YMISSGCLPDVTTYKDIIEGVCLC--GKIDEAYKFLEEMG-NKGYPPDIVTYNCFL---- 444
M+ SG + VT Y + LC G+I A + +EEMG KG +IVT+ +
Sbjct: 199 LMVESG-IDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCV 257
Query: 445 ---------------------------RVLCDN----KKSEEALKLYGRMIELRCIPSVQ 473
+VL D K EEA +L M + +
Sbjct: 258 KRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESY 317
Query: 474 TYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEV 533
YN++++ + + E + EM RG + DTY V++ GL K EA S L E+
Sbjct: 318 LYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNEL 377
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 94/210 (44%), Gaps = 9/210 (4%)
Query: 256 TQPEINAFNLLLDALCKCCLVEYAEGLYKKMRK-IINTNAETYNILVFGWCRVRSPTRGM 314
++ + +N L+ L K V L++KM++ +I + T ++ RV + G
Sbjct: 298 SERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGK 357
Query: 315 KLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMI 374
++ ++++ +PD N+ +D Y K G + + +F+ M TK ++ IM+
Sbjct: 358 EIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTK-------DLASWNIML 410
Query: 375 VTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNK-GY 433
A N +EE L +MI SG PD T+ ++ G G + E M +
Sbjct: 411 NCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRV 470
Query: 434 PPDIVTYNCFLRVLCDNKKSEEALKLYGRM 463
P + Y C + +L K +EA+K+ M
Sbjct: 471 SPALEHYACLVDILGRAGKIKEAVKVIETM 500
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 71/142 (50%), Gaps = 5/142 (3%)
Query: 252 IRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPT 311
+R+ + + N L+D KC +YAE ++KKM+ + + T+N++++G+
Sbjct: 604 LRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQ---HKSLITWNLMIYGYGSHGDCI 660
Query: 312 RGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYA 371
+ L +EM + G PD+ T+ + + +G + E ++FEFM+ P + YA
Sbjct: 661 TALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGI--EPNMEHYA 718
Query: 372 IMIVTLAQNDRMEECFKLMGYM 393
M+ L + +EE + + M
Sbjct: 719 NMVDLLGRAGLLEEAYSFIKAM 740
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 72/143 (50%), Gaps = 10/143 (6%)
Query: 298 NILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRT 357
N+++ + + +++ +EM G P+ +TY+ + C+ G + + + ++ M+
Sbjct: 227 NMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQV 286
Query: 358 KGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGK 417
KG P Y ++I +L+ R++E +++ M+++ PD+ TY ++ +C G+
Sbjct: 287 KGMV---PNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGR 343
Query: 418 IDEAYKFLEE-------MGNKGY 433
EA + +EE MG + Y
Sbjct: 344 GSEALEMVEEWKKRDPVMGERNY 366
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 89/211 (42%), Gaps = 23/211 (10%)
Query: 330 FTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQN-DRMEECF- 387
F +N A D Y K +R S S P +TY +++ +L + +++ C+
Sbjct: 158 FLFNRAFDVYNK------------MLR---SDDSKPDLETYTLLLSSLLKRFNKLNVCYV 202
Query: 388 ------KLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYN 441
L M S+G +PD II+ C ++DEA + +EM G P+ TY+
Sbjct: 203 YLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYS 262
Query: 442 CFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKR 501
++ +C+ + + L Y M +P+ Y +LI D A E +M
Sbjct: 263 YLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLAN 322
Query: 502 GCNLDTDTYCVMIEGLFNCNKTEEACSLLEE 532
+ D TY ++ L + EA ++EE
Sbjct: 323 SLSPDMLTYNTVLTELCRGGRGSEALEMVEE 353
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 84/216 (38%), Gaps = 44/216 (20%)
Query: 307 VRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPT 366
VRS T+ MK G PD F N + Y K + EA+ +F+ M GS
Sbjct: 207 VRSLTKQMK------SNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSE----- 255
Query: 367 AKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLE 426
P+ TY +++GVC G++ + F +
Sbjct: 256 ---------------------------------PNAYTYSYLVKGVCEKGRVGQGLGFYK 282
Query: 427 EMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMD 486
EM KG P+ Y + L ++ +EA+++ M+ P + TYN +++
Sbjct: 283 EMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGG 342
Query: 487 DPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNK 522
A E +E +KR + Y +++ ++ NK
Sbjct: 343 RGSEALEMVEEWKKRDPVMGERNYRTLMDEVYFLNK 378
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 113/283 (39%), Gaps = 10/283 (3%)
Query: 262 AFNLLLDALCKCCLVEYAEGLYKKMRKIIN--TNAETYNILVFGWCRVRSPTRGMKLLEE 319
+ L+ A + + A L ++M+ N + TY+IL+ + +V + + LL +
Sbjct: 187 VYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSD 246
Query: 320 MIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQ 379
M + G RP+ TYNT +D Y KA M E ++ G P + T +
Sbjct: 247 MRRQGIRPNTITYNTLIDAYGKAKMFVEMEST--LIQMLGEDDCKPDSWTMNSTLRAFGG 304
Query: 380 NDR---MEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPD 436
N + ME C++ SSG P++ T+ +++ G + +E M Y
Sbjct: 305 NGQIEMMENCYEKFQ---SSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWT 361
Query: 437 IVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQ 496
IVTYN + ++ L+ M R PS T L+ + D +
Sbjct: 362 IVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLR 421
Query: 497 EMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIK 539
+E LD + +++ K E +LE + KG K
Sbjct: 422 FIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFK 464
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 129/308 (41%), Gaps = 36/308 (11%)
Query: 267 LDALCKCCLVEYAEGLYKKMR---KIINTNAET----YNILVFGWCRVRSPTRGMKLLEE 319
L+ + K LV++ + KM +++N++ E + +V G+ R + E
Sbjct: 257 LNVVLKTSLVDFYSQ-FSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLE 315
Query: 320 MIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTY--------- 370
M LG +P+NFTY+ L + AV +F G I S T K
Sbjct: 316 MRSLGLQPNNFTYSAILS-------LCSAVRSLDF----GKQIHSQTIKVGFEDSTDVGN 364
Query: 371 AIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGN 430
A++ + + + E ++ G M+S P+V ++ +I G+ G + + + L EM
Sbjct: 365 ALVDMYMKCSASEVEASRVFGAMVS----PNVVSWTTLILGLVDHGFVQDCFGLLMEMVK 420
Query: 431 KGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDG 490
+ P++VT + LR + L+++ ++ + N L+ + D
Sbjct: 421 REVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDY 480
Query: 491 AFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLI 550
A+ + M++R D TY ++ K E A S++ + GI++ F+
Sbjct: 481 AWNVIRSMKRR----DNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFIS 536
Query: 551 QLSDLGDL 558
++LG L
Sbjct: 537 ASANLGAL 544
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 101/226 (44%), Gaps = 11/226 (4%)
Query: 293 NAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLF 352
N ++N+++ G+ + +K+ E M + +PD T+ + L + + G + + F
Sbjct: 223 NRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYF 282
Query: 353 EFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGV 412
MR G+ +S + A+ A+ + + K+ GY+I G + + +I
Sbjct: 283 HLMRMSGNAVS---GEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVY 339
Query: 413 CLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSV 472
GK+ +A ++ NKG I ++N + D K +EAL L+ + E+ + +V
Sbjct: 340 GKQGKVKDAEHLFRQIRNKG----IESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNV 395
Query: 473 Q----TYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMI 514
+ T+ +I D + E +++M+ ++ T C ++
Sbjct: 396 KANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCIL 441
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 112/276 (40%), Gaps = 12/276 (4%)
Query: 259 EINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLE 318
++ +N +L A L E A LY+ MR+ T L+ CR +
Sbjct: 122 DLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFH 181
Query: 319 -EMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTL 377
++IQ+G + + N L Y KAG + +A +LF M + ++ +MI
Sbjct: 182 TQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRM-------SWNVMIKGF 234
Query: 378 AQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDI 437
+Q E K+ +M PD T+ ++ CGK ++ K+ M G
Sbjct: 235 SQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSG 294
Query: 438 VTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQE 497
F V + + A K++G +I+ + + N LI ++ + A +++
Sbjct: 295 EALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQ 354
Query: 498 MEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEV 533
+ +G +++ +I + K +EA SL E+
Sbjct: 355 IRNKG----IESWNSLITSFVDAGKLDEALSLFSEL 386
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/344 (19%), Positives = 144/344 (41%), Gaps = 26/344 (7%)
Query: 187 AYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEKYLTHVQKF 246
+N ++ S+ K F ML + T P +++ +E V +
Sbjct: 84 VFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPF-----LIKASSEMECVLVGEQ 138
Query: 247 AKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKM--RKIINTNAETYNILVFGW 304
+ +R Q ++ N L+ C + A ++ +M R ++ ++ +V G+
Sbjct: 139 THSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVV-----SWTSMVAGY 193
Query: 305 CRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISS 364
C+ ++ +EM HR + FT++ ++ Y K +A+DLFEFM+ +G +
Sbjct: 194 CKCGMVENAREMFDEM---PHR-NLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANE 249
Query: 365 PTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKF 424
+ +I + A +E + Y++ S ++ +++ CG I++A
Sbjct: 250 TVMVS---VISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHV 306
Query: 425 LEEMGNKGYPP-DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFF 483
E G P D ++++ ++ L + + +A+ + +MI L IP T+ ++S
Sbjct: 307 FE-----GLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACS 361
Query: 484 EMDDPDGAFETWQEMEK-RGCNLDTDTYCVMIEGLFNCNKTEEA 526
+ E ++ M+K G + Y +++ L K EA
Sbjct: 362 HGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEA 405
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 99/227 (43%), Gaps = 26/227 (11%)
Query: 262 AFNLLLDALCKCCLVEYAEGLYKKMRK--IINTNAETYNILVFGWCRVRSPTRGMKLLEE 319
+N ++ + + A L+K+M++ I A ++L R+ T G+ LLE
Sbjct: 227 VWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVL-------RACT-GLALLEL 278
Query: 320 MIQ-----LGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMI 374
+Q + + D N +D YCK G + +A+ +F M+ + T++ MI
Sbjct: 279 GMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVI-------TWSTMI 331
Query: 375 VTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGN-KGY 433
LAQN +E KL M SSG P+ T ++ G +++ + + M G
Sbjct: 332 SGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGI 391
Query: 434 PPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLIS 480
P Y C + +L K ++A+KL E+ C P T+ L+
Sbjct: 392 DPVREHYGCMIDLLGKAGKLDDAVKLLN---EMECEPDAVTWRTLLG 435
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 106/257 (41%), Gaps = 19/257 (7%)
Query: 212 LDYMKRKNKSTVPVE--VLMTILRKYTEKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDA 269
L+ KR ++ E L ++LR T L + A ++ +N N L+D
Sbjct: 245 LELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILN--NALVDM 302
Query: 270 LCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDN 329
CKC +E A ++ +M++ + T++ ++ G + +KL E M G +P+
Sbjct: 303 YCKCGSLEDALRVFNQMKE---RDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNY 359
Query: 330 FTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKL 389
T L AG++ + F M+ P + Y MI L + ++++ KL
Sbjct: 360 ITIVGVLFACSHAGLLEDGWYYFRSMKKLYGI--DPVREHYGCMIDLLGKAGKLDDAVKL 417
Query: 390 MGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGY---PPDIVTYNCFLRV 446
+ M C PD T++ ++ G C ++ E K P D TY +
Sbjct: 418 LNEM---ECEPDAVTWRTLL-GAC---RVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNI 470
Query: 447 LCDNKKSEEALKLYGRM 463
+++K + ++ RM
Sbjct: 471 YANSQKWDSVEEIRTRM 487
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/318 (20%), Positives = 109/318 (34%), Gaps = 72/318 (22%)
Query: 324 GHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRM 383
GHRP F N ++ Y K ++ +A LF+ M + ++ MI ++
Sbjct: 91 GHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVI-------SWTTMISAYSKCKIH 143
Query: 384 EECFKLMGYMISSGCLPDVTTYKDIIEG--------VCLCGKIDEAYK--------FLEE 427
++ +L+ M+ P+V TY ++ + CG I E + ++
Sbjct: 144 QKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDV 203
Query: 428 MGNKGYPP------------DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTY 475
G P D + +N + N +S+ AL+L+ RM I T
Sbjct: 204 FAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATL 263
Query: 476 ---------------------------------NMLISMFFEMDDPDGAFETWQEMEKRG 502
N L+ M+ + + A + +M++R
Sbjct: 264 TSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKER- 322
Query: 503 CNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIH 562
D T+ MI GL ++EA L E + + G K Y L S G L
Sbjct: 323 ---DVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGW 379
Query: 563 KLSDHMRKFYNPAMARRY 580
M+K Y R +
Sbjct: 380 YYFRSMKKLYGIDPVREH 397
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 106/238 (44%), Gaps = 13/238 (5%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVFGWCRVRSPTRGMK 315
+ ++ A+N +++ + E A LY +M K I + T L+ ++ + T G +
Sbjct: 51 EKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKR 110
Query: 316 LLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIV 375
+ MI++G + + N LD Y + G + EA LF+ M K S ++ +IV
Sbjct: 111 VHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSV-------SWTSLIV 163
Query: 376 TLAQNDRMEECFKLMGYMISS-GCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNK-GY 433
LA N +E +L YM S+ G LP T+ I+ CG + E +++ M +
Sbjct: 164 GLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKI 223
Query: 434 PPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGA 491
P I + C + +L ++ + K Y + + P+V + L+ D D A
Sbjct: 224 EPRIEHFGCMVDLLA---RAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 278
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 4/125 (3%)
Query: 313 GMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAI 372
++L ++ PD + ++ Y AG E + +F MR S +S P A TY++
Sbjct: 216 ALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVF--MRMLASGVS-PNAYTYSV 272
Query: 373 MIVTLAQNDRM-EECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNK 431
+I LA + + ++ K + M+ +G P+ TY + E GK + A + L+EM K
Sbjct: 273 LIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEESARELLQEMKGK 332
Query: 432 GYPPD 436
G+ PD
Sbjct: 333 GFVPD 337
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 70/173 (40%), Gaps = 13/173 (7%)
Query: 337 DTYCKAGMITEAVD------LFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLM 390
D + K I E D +F MRT+G T + M L+++ R E +L
Sbjct: 167 DPFSKKPAIEEPEDPKNLQEIFHKMRTEGFTNEA------VKMFDALSKDGRTHEALELF 220
Query: 391 GYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVL-CD 449
+ +PDV + I+E G+ E K M G P+ TY+ ++ L D
Sbjct: 221 SQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAAD 280
Query: 450 NKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRG 502
K ++A K M+ P+ TY + F + A E QEM+ +G
Sbjct: 281 GKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEESARELLQEMKGKG 333
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 9/136 (6%)
Query: 408 IIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELR 467
+ + + G+ EA + ++ +K PD+V + + + +++E LK++ RM+
Sbjct: 203 MFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASG 262
Query: 468 CIPSVQTYNMLISMFFEMDDPDG-----AFETWQEMEKRGCNLDTDTYCVMIEGLFNCNK 522
P+ TY++LI DG A + EM G + + TY + E K
Sbjct: 263 VSPNAYTYSVLIKGLA----ADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGK 318
Query: 523 TEEACSLLEEVINKGI 538
E A LL+E+ KG
Sbjct: 319 EESARELLQEMKGKGF 334
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 101/259 (38%), Gaps = 50/259 (19%)
Query: 259 EINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLE 318
+I F LLD K + A+ ++ ++ + + + ++ G+ + S + L
Sbjct: 346 KIEGFTALLDGYIKLGDMNQAKNIFVSLK---DRDVVAWTAMIVGYEQHGSYGEAINLFR 402
Query: 319 EMIQLGHRPDNFTY-----------------------------------NTALDTYCKAG 343
M+ G RP+++T N + Y KAG
Sbjct: 403 SMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAG 462
Query: 344 MITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVT 403
IT A F+ +R + T+S + MI+ LAQ+ EE +L M+ G PD
Sbjct: 463 NITSASRAFDLIRCERDTVS------WTSMIIALAQHGHAEEALELFETMLMEGLRPDHI 516
Query: 404 TYKDIIEGVCLCGKIDEAYKFLEEMGN-KGYPPDIVTYNCFLRVLCDNKKSEEALKLYGR 462
TY + G +++ ++ + M + P + Y C + + +EA + +
Sbjct: 517 TYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEK 576
Query: 463 M-IELRCIPSVQTYNMLIS 480
M IE P V T+ L+S
Sbjct: 577 MPIE----PDVVTWGSLLS 591
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 59/130 (45%), Gaps = 3/130 (2%)
Query: 310 PTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKT 369
P + L M ++G P Y T +D Y +G + +A ++F M KG P T
Sbjct: 705 PLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQL---PNVFT 761
Query: 370 YAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMG 429
Y MI L E L+ M S GC P+ Y ++ + GK+ EA K ++EM
Sbjct: 762 YNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMV 821
Query: 430 NKGYPPDIVT 439
KG+ +V+
Sbjct: 822 KKGHYVHLVS 831
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%)
Query: 390 MGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCD 449
+ +M G P V Y +I+G + G++D+A + EM KG P++ TYN +R LC
Sbjct: 712 LNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCM 771
Query: 450 NKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRG 502
+ EA L M C P+ Y+ L+ + A + +EM K+G
Sbjct: 772 AGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 122/296 (41%), Gaps = 6/296 (2%)
Query: 244 QKFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMR-KIINTNAETYNILVF 302
Q+F K +R+ + + + ++ +L K A + ++M+ K I ++E Y++L+
Sbjct: 233 QEF-KSQRLSFLAKESGSIYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIR 291
Query: 303 GWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTI 362
+ R KL +E D + Y + G + +++ MR +
Sbjct: 292 AFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKV 351
Query: 363 SSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAY 422
T ++ ++ E K+ + + C TY I C K ++A
Sbjct: 352 ---TDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAE 408
Query: 423 KFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMF 482
+EM KG+ +V Y+ + + ++ +A++L +M + C P++ YN LI M
Sbjct: 409 MLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMH 468
Query: 483 FEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEV-INKG 537
D A + W+EM++ D +Y MI + E L +E +N+G
Sbjct: 469 GRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRG 524
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 93/221 (42%), Gaps = 3/221 (1%)
Query: 336 LDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMIS 395
++ + K EAV ++E+ + T YAI I + ++ + L M+
Sbjct: 360 VNGFSKQRGFAEAVKVYEWAMKEECEAGQVT---YAIAINAYCRLEKYNKAEMLFDEMVK 416
Query: 396 SGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEE 455
G V Y +I++ ++ +A + + +M +G P+I YN + +
Sbjct: 417 KGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRR 476
Query: 456 ALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIE 515
A K++ M + +P +Y +IS + + + E +QE +D +M+
Sbjct: 477 AEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVG 536
Query: 516 GLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQLSDLG 556
++ +E LL+++ +G +L + + S L L D G
Sbjct: 537 VFSKTSRIDELMRLLQDMKVEGTRLDARLYSSALNALRDAG 577
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 102/242 (42%), Gaps = 15/242 (6%)
Query: 268 DALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRP 327
+ +C L E G ++ + N ET + + R+ ++L + M LG +P
Sbjct: 81 NVVCGLELEEKTAGDRNRIHFLEERNEETLSKRLRKLSRLDKVRSALELFDSMRFLGLQP 140
Query: 328 DNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECF 387
+ N+ L + G I +A +FEFMR K + T TY++M+ +A+ E
Sbjct: 141 NAHACNSFLSCLLRNGDIQKAFTVFEFMRKK----ENVTGHTYSLMLKAVAEVKGCESAL 196
Query: 388 KLMGYMISS----GCLPDVTTYKDIIEGVCLCGKIDEAY---KFLEEMGNKGYPPDIVTY 440
++ + C DV Y I LCG+I+ Y + M G+ +TY
Sbjct: 197 RMFRELEREPKRRSCF-DVVLYNTAIS---LCGRINNVYETERIWRVMKGDGHIGTEITY 252
Query: 441 NCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEK 500
+ + + +SE AL +Y M+ + +IS + + D A + +Q M K
Sbjct: 253 SLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSMLK 312
Query: 501 RG 502
+G
Sbjct: 313 KG 314
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 121/301 (40%), Gaps = 21/301 (6%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKL 316
QP +A N L L + ++ A +++ MRK N TY++++ V+ +++
Sbjct: 139 QPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKENVTGHTYSLMLKAVAEVKGCESALRM 198
Query: 317 LEEMIQLGHRPDNFT---YNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIM 373
E+ + R F YNTA+ + + E ++ M+ G T TY+++
Sbjct: 199 FRELEREPKRRSCFDVVLYNTAISLCGRINNVYETERIWRVMKGDGHI---GTEITYSLL 255
Query: 374 IVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGY 433
+ + R E + M+++ +I K D A K + M KG
Sbjct: 256 VSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGM 315
Query: 434 PPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFE 493
P++V N + L K K+Y + L P T+N L++ ++ + + +
Sbjct: 316 KPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQ 375
Query: 494 TWQEMEKRGCNLDTDTYCVMIEGLFN-----CNKT---EEACSLLEEVINKGIKLPYKKF 545
+ + ++ C + E L+N C K E+A LL E+ G+ + +
Sbjct: 376 LFDMIR-------SENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSY 428
Query: 546 D 546
+
Sbjct: 429 N 429
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 102/233 (43%), Gaps = 11/233 (4%)
Query: 263 FNLLLDALCKCCLVEYAEGLYKKM-RKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMI 321
++LL+ +C E A +Y +M I+ + ++ + +K+ + M+
Sbjct: 252 YSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSML 311
Query: 322 QLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQND 381
+ G +P+ NT +++ KAG + ++ +++ G P T+ ++ L + +
Sbjct: 312 KKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGH---KPDEYTWNALLTALYKAN 368
Query: 382 RMEECFKLMGYMISSG-CLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTY 440
R E+ +L + S C + Y + G ++A K L EM G +Y
Sbjct: 369 RYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSY 428
Query: 441 NCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLI------SMFFEMDD 487
N + ++KS+ AL +Y M + C P+ TY L+ S++ E++D
Sbjct: 429 NLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSLWDEVED 481
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 105/231 (45%), Gaps = 22/231 (9%)
Query: 257 QPEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAE-TYNILVFGWCRVRSPTRGMK 315
+P + A N L+++L K V +Y ++ + + E T+N L+ + ++
Sbjct: 316 KPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQ 375
Query: 316 LLEEMIQLGHRPDN------FTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKT 369
L + MI R +N + YNTA+ + K G +AV L M G T+S+ +
Sbjct: 376 LFD-MI----RSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSS--- 427
Query: 370 YAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKI-DEAYKFLEEM 428
Y ++I ++ + + + +M C P+ TY ++ C+ G + DE L
Sbjct: 428 YNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRS-CIWGSLWDEVEDIL--- 483
Query: 429 GNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLI 479
K PD+ YN + +C ++ + A +LY +M E+ P +T M++
Sbjct: 484 --KKVEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGKTRAMML 532
>AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr5:26952352-26955480 FORWARD LENGTH=798
Length = 798
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 7/212 (3%)
Query: 327 PDNFTYNTALDTYCKAGMITEAVD-LFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEE 385
PD YN L+ C + +AV +F +R G P TY + + + ++ + +
Sbjct: 339 PDLVVYNAILNA-CVPTLQWKAVSWVFVELRKNGL---RPNGATYGLAMEVMLESGKFDR 394
Query: 386 CFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLR 445
M SSG P TYK ++ + GKI+EA + + +M KG Y
Sbjct: 395 VHDFFRKMKSSGEAPKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVIGTGSVYYELAC 454
Query: 446 VLCDNKKSEEALKLYGRMIELR-CIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCN 504
LC+N + +A+ GRM L C P T+ LI+ D +Q M K C+
Sbjct: 455 CLCNNGRWCDAMLEVGRMKRLENCRPLEITFTGLIAASLNGGHVDDCMAIFQYM-KDKCD 513
Query: 505 LDTDTYCVMIEGLFNCNKTEEACSLLEEVINK 536
+ T +M++ + EA L EE++++
Sbjct: 514 PNIGTANMMLKVYGRNDMFSEAKELFEEIVSR 545
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 112/244 (45%), Gaps = 12/244 (4%)
Query: 319 EMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLA 378
E+ + G RP+ TY A++ ++G D F M++ G +P A TY +++ L
Sbjct: 366 ELRKNGLRPNGATYGLAMEVMLESGKFDRVHDFFRKMKSSG---EAPKAITYKVLVRALW 422
Query: 379 QNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLC--GKIDEAYKFLEEMGN-KGYPP 435
+ ++EE + + M G + + Y ++ CLC G+ +A + M + P
Sbjct: 423 REGKIEEAVEAVRDMEQKGVIGTGSVYYEL--ACCLCNNGRWCDAMLEVGRMKRLENCRP 480
Query: 436 DIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETW 495
+T+ + + ++ + ++ M + +C P++ T NM++ ++ D A E +
Sbjct: 481 LEITFTGLIAASLNGGHVDDCMAIFQYMKD-KCDPNIGTANMMLKVYGRNDMFSEAKELF 539
Query: 496 QEM-EKRGCNLDTD--TYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKFDSFLIQL 552
+E+ ++ +L + TY M+E + E + + ++ G ++ K S LI+
Sbjct: 540 EEIVSRKETHLVPNEYTYSFMLEASARSLQWEYFEHVYQTMVLSGYQMDQTKHASMLIEA 599
Query: 553 SDLG 556
S G
Sbjct: 600 SRAG 603
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 87/236 (36%), Gaps = 46/236 (19%)
Query: 264 NLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQL 323
N L+D KC + E AE ++K + + ++ L+ G+ + G+KL +M
Sbjct: 390 NSLVDMYAKCEMFEEAELIFKSLPQRTTV---SWTALISGYVQKGLHGAGLKLFTKMRGS 446
Query: 324 GHRPDNFTYNTAL-----------------------------------DTYCKAGMITEA 348
R D T+ T L D Y K G I +A
Sbjct: 447 NLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDA 506
Query: 349 VDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDI 408
V +FE M + A ++ +I A N E MI SG PD + +
Sbjct: 507 VQVFEEMPDR-------NAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGV 559
Query: 409 IEGVCLCGKIDEAYKFLEEMGN-KGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRM 463
+ CG +++ ++ + M G P Y C L +L N + EA KL M
Sbjct: 560 LTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEM 615
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 131/330 (39%), Gaps = 23/330 (6%)
Query: 187 AYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEKYLTHVQKF 246
A+N M+ + SS K R + + NK T + VL T R+ T+V+
Sbjct: 127 AWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSI-VLSTCARE------TNVEFG 179
Query: 247 AKKKRIRVKTQPEINAF--NLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGW 304
+ +K E N++ L+D KC + A +++ I++ N + L G+
Sbjct: 180 RQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEW---IVDPNTVCWTCLFSGY 236
Query: 305 CRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISS 364
+ P + + E M GHRPD+ + T ++TY + G + +A LF M SS
Sbjct: 237 VKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEM-------SS 289
Query: 365 PTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKF 424
P + +MI + + M S +T ++ + + +D
Sbjct: 290 PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVV 349
Query: 425 LEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFE 484
E G +I + + + +K E A K++ + E + +N +I +
Sbjct: 350 HAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDV----FWNAMIRGYAH 405
Query: 485 MDDPDGAFETWQEMEKRGCNLDTDTYCVMI 514
+ E + +M+ G N+D T+ ++
Sbjct: 406 NGESHKVMELFMDMKSSGYNIDDFTFTSLL 435
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 140/360 (38%), Gaps = 35/360 (9%)
Query: 236 TEKYLTHVQKFAKKKRI-----RVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKII 290
T K THV + K++ + +++ + L+D KC G+ K RK+
Sbjct: 535 TLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKC-------GIIKDARKVF 587
Query: 291 NTNAE----TYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMIT 346
++ E + N L+ G+ + + + L +EM+ G P T+ T ++ K +T
Sbjct: 588 SSLPEWSVVSMNALIAGYSQ-NNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLT 646
Query: 347 EAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDR-MEECFKLMGYMISSGCLPDVTTY 405
+ +G S + I ++ + N R M E L + S + +
Sbjct: 647 LGTQFHGQITKRGF---SSEGEYLGISLLGMYMNSRGMTEACALFSELSSP---KSIVLW 700
Query: 406 KDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIE 465
++ G G +EA KF +EM + G PD T+ LRV E ++ +
Sbjct: 701 TGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFH 760
Query: 466 LRCIPSVQTYNMLISMFFEMDDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEE 525
L T N LI M+ + D G+ + + EM +R + ++ +I G E+
Sbjct: 761 LAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRS---NVVSWNSLINGYAKNGYAED 817
Query: 526 ACSLLEEVINKGIKLPYKKFDSFLIQLSDLGDLHAIHKLSDHMRKFYNPAMARRYAISQK 585
A + + + I F L S G K+SD + F M +Y I +
Sbjct: 818 ALKIFDSMRQSHIMPDEITFLGVLTACSHAG------KVSDGRKIF--EMMIGQYGIEAR 869
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 121/295 (41%), Gaps = 56/295 (18%)
Query: 288 KIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFT---------------- 331
+I+ YN ++ G+ R P + L EM +P+ T
Sbjct: 189 RIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDL 248
Query: 332 ------------------YNTAL-DTYCKAGMITEAVDLFEFMRTKGSTISSPTAKTYAI 372
NTAL D + K G + +AV +FE MR K + + ++
Sbjct: 249 GKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDT-------QAWSA 301
Query: 373 MIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNK- 431
MIV A + + E+ + M S PD T+ ++ G+++E K+ +M +K
Sbjct: 302 MIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKF 361
Query: 432 GYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGA 491
G P I Y + +L E+A Y + +L P+ + +L++ ++ D A
Sbjct: 362 GIVPSIKHYGSMVDLLSRAGNLEDA---YEFIDKLPISPTPMLWRILLAACSSHNNLDLA 418
Query: 492 FETWQEMEKRGCNLDTDTYC---VMIEGLFNCNKTEEACSLLEEVIN--KGIKLP 541
+++ +R LD D++ V++ L+ NK E L +V+ K +K+P
Sbjct: 419 ----EKVSERIFELD-DSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVP 468
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 112/265 (42%), Gaps = 19/265 (7%)
Query: 307 VRSPTRGMKLLEEMIQ-LGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISSP 365
++S R L + +++ LG D + N +D Y K + A +F+ IS
Sbjct: 113 IKSAGRFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFD-------QISQR 165
Query: 366 TAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFL 425
+ +MI + EE KL M + DV ++ +I G ++ A K+
Sbjct: 166 KGSDWNVMISGYWKWGNKEEACKLFDMMPEN----DVVSWTVMITGFAKVKDLENARKYF 221
Query: 426 EEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEM 485
+ M K +V++N L N +E+AL+L+ M+ L P+ T+ ++IS
Sbjct: 222 DRMPEKS----VVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFR 277
Query: 486 DDPDGAFETWQEMEKRGCNLDTDTYCVMIEGLFNCNKTEEACSLLEEVINKGIKLPYKKF 545
DP + ++++ L+ +++ C + A + E+ G + +
Sbjct: 278 ADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNEL---GTQRNLVTW 334
Query: 546 DSFLIQLSDLGDLHAIHKLSDHMRK 570
++ + + +GD+ + +L D M K
Sbjct: 335 NAMISGYTRIGDMSSARQLFDTMPK 359
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 122/297 (41%), Gaps = 23/297 (7%)
Query: 187 AYNDMMDILSSTKYKVKQFRIVCDMLDYMKRKNKSTVPVEVLMTILRKYTEKYLTH-VQK 245
++N M+ + + R+ DML R N++T + + R + LT + K
Sbjct: 231 SWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFR--ADPSLTRSLVK 288
Query: 246 FAKKKRIRVKTQPEINAF--NLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFG 303
+KR+R +N F LLD KC ++ A ++ ++ N T+N ++ G
Sbjct: 289 LIDEKRVR------LNCFVKTALLDMHAKCRDIQSARRIFNELGT--QRNLVTWNAMISG 340
Query: 304 WCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTIS 363
+ R+ + +L + M + + ++N+ + Y G A++ FE M G S
Sbjct: 341 YTRIGDMSSARQLFDTM----PKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGD--S 394
Query: 364 SPTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYK 423
P T ++ +E ++ Y+ + + + Y+ +I G + EA +
Sbjct: 395 KPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKR 454
Query: 424 FLEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLIS 480
+EM + D+V+YN N E L L +M + P TY +++
Sbjct: 455 VFDEMKER----DVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLT 507
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 104/236 (44%), Gaps = 14/236 (5%)
Query: 245 KFAKKKRIRVKTQPEINAFNLLLDALCKCCLVEYAEGLYKKMRKIINTNAETYNILVFGW 304
++ I+ EI N L+DA KC +E ++ KM + N T+N +V G
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQ---RNIYTWNSVVTGL 96
Query: 305 CRVRSPTRGMKLLEEMIQLGHRPDNFTYNTALDTYCKAGMITEAVDLFEFMRTKGSTISS 364
++ L M + D T+N+ + + + EA+ F M +G ++
Sbjct: 97 TKLGFLDEADSLFRSMPE----RDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNE 152
Query: 365 PTAKTYAIMIVTLAQNDRMEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKF 424
++A ++ + + M + ++ + S L DV +++ CG +++A +
Sbjct: 153 ---YSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRV 209
Query: 425 LEEMGNKGYPPDIVTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLIS 480
+EMG++ ++V++N + N + EAL ++ M+E R P T +IS
Sbjct: 210 FDEMGDR----NVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVIS 261
>AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=575
Length = 575
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 105/267 (39%), Gaps = 9/267 (3%)
Query: 161 LRYDEKIAFRFFTWAGNQENYSHEPCAYNDMMDILSSTK-----YKVKQFRIVCDMLDYM 215
L D + F F WA Q ++HE C+Y+ + L + K V FR + + +
Sbjct: 141 LEEDPFLCFHLFNWASQQPRFTHENCSYHIAIRKLGAAKSGKLIRAVNIFRHMVNSRNLE 200
Query: 216 KRKNKSTVPVEVLMTILRKYTEKYLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKCCL 275
R T + + +L + ++ H+ + R I L+ L K
Sbjct: 201 CRPTMRTYHI-LFKALLGRGNNSFINHLYMETVRSLFRQMVDSGIEPDVFALNCLVKGRT 259
Query: 276 VEYAEGLYKKMRKIINTNAETYNILVFGWCRVRSPTRGMKLLEEMIQLGHRPDNFTYNTA 335
+ E L + K N ++YN LV + +K L EMI+ G D +Y T
Sbjct: 260 INTRELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTL 319
Query: 336 LDTYCKAGMITEAVDLFEFMRTKG--STISSPTAKTYAIMIVTLAQNDRMEECFKLMGYM 393
+D C+ G EA L E +R K S K Y ++I+ L + + YM
Sbjct: 320 VDESCRKGKYDEATRLLEMLREKQLVDIDSDDKLKMYQMVILVLLFSSMLPSVCDESRYM 379
Query: 394 ISSGCLPDVTTYKDIIEGVCLCGKIDE 420
I +P + D++ G+++E
Sbjct: 380 IVRN-VPALGCGDDLMRLFMTYGEVEE 405
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 16/192 (8%)
Query: 328 DNFTYNTALDTY--CKAGMITEAVDLFEFMRTKGSTISSPTAKTYAIMIVTLAQNDR--- 382
+N +Y+ A+ K+G + AV++F M + PT +TY I+ L
Sbjct: 164 ENCSYHIAIRKLGAAKSGKLIRAVNIFRHMVNSRNLECRPTMRTYHILFKALLGRGNNSF 223
Query: 383 -----MEECFKLMGYMISSGCLPDVTTYKDIIEGVCLCGKIDEAYKFLEEMGNKGYPPDI 437
ME L M+ SG PDV +++G + + + L EM KG+ P+
Sbjct: 224 INHLYMETVRSLFRQMVDSGIEPDVFALNCLVKGRTINTR-----ELLSEMKGKGFVPNG 278
Query: 438 VTYNCFLRVLCDNKKSEEALKLYGRMIELRCIPSVQTYNMLISMFFEMDDPDGAFETWQE 497
+YN + + + ++A+K MIE + +Y L+ D A +
Sbjct: 279 KSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEM 338
Query: 498 M-EKRGCNLDTD 508
+ EK+ ++D+D
Sbjct: 339 LREKQLVDIDSD 350