Miyakogusa Predicted Gene

Lj0g3v0294689.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0294689.1 Non Chatacterized Hit- tr|B9RWI6|B9RWI6_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,82.06,0,SUBFAMILY NOT NAMED,NULL; UNCHARACTERIZED,Putative
S-adenosyl-L-methionine-dependent methyltransfera,CUFF.19738.1
         (453 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G04900.1 | Symbols:  | Protein of unknown function (DUF185) |...   663   0.0  

>AT1G04900.1 | Symbols:  | Protein of unknown function (DUF185) |
           chr1:1383912-1387561 FORWARD LENGTH=442
          Length = 442

 Score =  663 bits (1710), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/420 (74%), Positives = 365/420 (86%), Gaps = 8/420 (1%)

Query: 36  ALYSTN-IVGDKPLLVRDFIHSALYHPLHGYFSQRSRSVGVLPSSIKFNQLQGRKAYMRY 94
           A +ST  ++GD+P+LVRDFIH+ALY P+ GYFSQRS+SVGVL  SIKFNQL+GRKAYM+ 
Sbjct: 29  AFFSTQKLIGDEPVLVRDFIHTALYDPIQGYFSQRSKSVGVLERSIKFNQLEGRKAYMKL 88

Query: 95  LDNIYKQNDISWFTPVELFKPWYAHAIAESIMRTANFSVPLKIYEIGGGSGTCAKGIMDY 154
           L+ +YKQ+DISWFTPVELFKPWYAH IAE+I+RT N SVPLKIYEIGGGSGTCAKG++DY
Sbjct: 89  LEKVYKQSDISWFTPVELFKPWYAHGIAEAILRTTNLSVPLKIYEIGGGSGTCAKGVLDY 148

Query: 155 IMLNAPPKVYNSMTYISVEISPSLAEVQRETVGEVRSHIPKFRVECRDAADRSGWGHVEQ 214
           IMLNAP ++Y +M+Y S+EISPSLA++Q+ETV +V SH+ KFRVECRDA+D +GW +VEQ
Sbjct: 149 IMLNAPERIYKNMSYTSIEISPSLAKIQKETVAQVGSHLSKFRVECRDASDLAGWKNVEQ 208

Query: 215 QPCWVIMLEVLDNLPHDLVYSENQISPWMEVWVEKQYDRETLSELYKPLQDSLITRCVEI 274
           QPCWVIMLEVLDNLPHDLVYS++Q+SPWMEV VE + + E LSELYKPL+D LI RC+EI
Sbjct: 209 QPCWVIMLEVLDNLPHDLVYSKSQLSPWMEVLVENKPESEALSELYKPLEDPLIKRCIEI 268

Query: 275 MDLDKTKTTQSTAVSTLKSIWSKVHPKPQRCWLPTGCLKLLEVLHEVLPKMSLIASDFSY 334
           ++       +   VS  K IWSK+ PKP+R WLPTGCLKLLEVLH  LPKMSLIASDFS+
Sbjct: 269 VE------HEDDPVSKPKEIWSKLFPKPRRSWLPTGCLKLLEVLHAKLPKMSLIASDFSF 322

Query: 335 LPDVKILGERAPLVSTKKDGSSSDYESYMEAKGDADIFFPTDFWLLEQIDHYCSGWLKPH 394
           LPDVK+ GERAPLVSTKKDG SSDY SY++AKGDADIFFPTDFWLLE++DHYCSGW K  
Sbjct: 323 LPDVKVPGERAPLVSTKKDGCSSDYSSYLDAKGDADIFFPTDFWLLERMDHYCSGWRKME 382

Query: 395 GDHA-SKKGKKRRTITLDTSSFMEEFGLPTKTRTKDGYNPLLDDFKNTKFYLSVPTHNIK 453
            D   SKKG+KRRT+TLDTS+FM+EFGLP+KTRTKDGYNPLLDDFKNTKFYLSVPTHN K
Sbjct: 383 KDGTPSKKGRKRRTLTLDTSAFMDEFGLPSKTRTKDGYNPLLDDFKNTKFYLSVPTHNTK 442