Miyakogusa Predicted Gene

Lj0g3v0294599.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0294599.1 Non Chatacterized Hit- tr|F4YFH8|F4YFH8_CAMSI
Putative uncharacterized protein (Fragment) OS=Camelli,93.48,5e-19,
,CUFF.19736.1
         (46 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G12970.1 | Symbols: STOMAGEN, EPFL9 | stomagen | chr4:7586244...    96   6e-21

>AT4G12970.1 | Symbols: STOMAGEN, EPFL9 | stomagen |
           chr4:7586244-7586798 REVERSE LENGTH=102
          Length = 102

 Score = 95.5 bits (236), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 43/46 (93%), Positives = 45/46 (97%)

Query: 1   MIGSTAPTCTYNECRGCKYRCRAEQVPVEGNDPINSPYHYRCVCHR 46
           MIGSTAPTCTYNECRGC+Y+CRAEQVPVEGNDPINS YHYRCVCHR
Sbjct: 57  MIGSTAPTCTYNECRGCRYKCRAEQVPVEGNDPINSAYHYRCVCHR 102