Miyakogusa Predicted Gene

Lj0g3v0294529.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0294529.1 tr|G8XS16|G8XS16_9ASTR Homogentisate
phytylprenyltransferase OS=Artemisia sphaerocephala PE=2
SV=1,54.02,8e-19,UbiA,UbiA prenyltransferase family;
BACTERIOCHLOROPHYLL SYNTHASE,NULL;
PRENYLTRANSFERASES,NULL,TC67425.path1.1
         (117 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G11945.2 | Symbols: PDS2, ATHST, HST | homogentisate prenyltr...   116   4e-27
AT3G11945.1 | Symbols: PDS2, ATHST, HST | homogentisate prenyltr...   116   4e-27
AT2G18950.1 | Symbols: HPT1, TPT1, ATHPT, VTE2 | homogentisate p...    59   9e-10

>AT3G11945.2 | Symbols: PDS2, ATHST, HST | homogentisate
           prenyltransferase | chr3:3780041-3782880 REVERSE
           LENGTH=393
          Length = 393

 Score =  116 bits (290), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 56/87 (64%), Positives = 70/87 (80%)

Query: 1   MKWSFWFKAVSTLFALLCANIYIVGINQIYDISVDKINKPHLPIASGEISVRLAWLLVIY 60
           +KWS   KA+S L AL+C N YIVGINQIYDI +DK+NKP+LPIA+G++SV+ AWLLVI+
Sbjct: 132 IKWSLVLKALSGLLALICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSAWLLVIF 191

Query: 61  FTAAGLLVVGFTSGPLLFSLYALRICL 87
           F  AGLLVVGF  GP + SLY+L + L
Sbjct: 192 FAIAGLLVVGFNFGPFITSLYSLGLFL 218


>AT3G11945.1 | Symbols: PDS2, ATHST, HST | homogentisate
           prenyltransferase | chr3:3780041-3782880 REVERSE
           LENGTH=386
          Length = 386

 Score =  116 bits (290), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 56/87 (64%), Positives = 70/87 (80%)

Query: 1   MKWSFWFKAVSTLFALLCANIYIVGINQIYDISVDKINKPHLPIASGEISVRLAWLLVIY 60
           +KWS   KA+S L AL+C N YIVGINQIYDI +DK+NKP+LPIA+G++SV+ AWLLVI+
Sbjct: 125 IKWSLVLKALSGLLALICGNGYIVGINQIYDIGIDKVNKPYLPIAAGDLSVQSAWLLVIF 184

Query: 61  FTAAGLLVVGFTSGPLLFSLYALRICL 87
           F  AGLLVVGF  GP + SLY+L + L
Sbjct: 185 FAIAGLLVVGFNFGPFITSLYSLGLFL 211


>AT2G18950.1 | Symbols: HPT1, TPT1, ATHPT, VTE2 | homogentisate
           phytyltransferase 1 | chr2:8207491-8210047 FORWARD
           LENGTH=393
          Length = 393

 Score = 58.5 bits (140), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 26/48 (54%), Positives = 35/48 (72%)

Query: 15  ALLCANIYIVGINQIYDISVDKINKPHLPIASGEISVRLAWLLVIYFT 62
           A L  NIYIVG+NQ+ D+ +DK+NKP+LP+ASGE SV     +V  F+
Sbjct: 144 AALMMNIYIVGLNQLSDVEIDKVNKPYLPLASGEYSVNTGIAIVASFS 191