Miyakogusa Predicted Gene

Lj0g3v0293229.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0293229.1 tr|G7ITZ5|G7ITZ5_MEDTR Aconitate hydratase
OS=Medicago truncatula GN=MTR_2g088360 PE=4 SV=1,75.19,0,Aconitase
iron-sulfur domain,Aconitase/3-isopropylmalate dehydratase large
subunit, alpha/beta/alpha,CUFF.19628.1
         (494 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G05710.1 | Symbols: ACO3 | aconitase 3 | chr2:2141591-2146350...   739   0.0  
AT4G35830.1 | Symbols: ACO1 | aconitase 1 | chr4:16973007-169779...   701   0.0  
AT4G26970.1 | Symbols: ACO2 | aconitase 2 | chr4:13543077-135484...   682   0.0  
AT4G35830.2 | Symbols: ACO1 | aconitase 1 | chr4:16973007-169772...   628   e-180
AT4G13430.1 | Symbols: IIL1, ATLEUC1 | isopropyl malate isomeras...    73   4e-13

>AT2G05710.1 | Symbols: ACO3 | aconitase 3 | chr2:2141591-2146350
           FORWARD LENGTH=990
          Length = 990

 Score =  739 bits (1907), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/516 (72%), Positives = 425/516 (82%), Gaps = 27/516 (5%)

Query: 1   MLESAIRNCHWGQDITKEDVEMIIDWESSSTKQVEIPFIPARVLLQDFTQVPANVILACI 60
           +LESAIRNC   Q +TKEDVE IIDWE +S KQVEIPF PARVLLQDFT VPA V LAC+
Sbjct: 138 LLESAIRNCDNFQ-VTKEDVEKIIDWEKTSPKQVEIPFKPARVLLQDFTGVPAVVDLACM 196

Query: 61  RD-------------DLVSVNLVTGHSVEVDVA--------NLELEFQRSKEICDSRRRV 99
           RD              LV V+LV  HSV+VDVA        N+ELEFQR+KE     +  
Sbjct: 197 RDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVARSENAVQANMELEFQRNKERFAFLKWG 256

Query: 100 SKSCHNMLVVPPGSG-PHQVNLEYLSSVVFNAEGLLYPDSVVGIDSHTTMINGLGVSGWG 158
           S +  NMLVVPPGSG  HQVNLEYL  VVFN +GLLYPDSVVG DSHTTMI+GLGV+GWG
Sbjct: 257 STAFQNMLVVPPGSGIVHQVNLEYLGRVVFNTKGLLYPDSVVGTDSHTTMIDGLGVAGWG 316

Query: 159 VGRIEAEAVMYGKPMNMILPCVVGFKLSGKLRNGITTTDLALTITQILREHGVVGKFVEF 218
           VG IEAEA M G+PM+M+LP VVGFKL+GK+RNG+T TDL LT+TQ+LR+HGVVGKFVEF
Sbjct: 317 VGGIEAEATMLGQPMSMVLPGVVGFKLAGKMRNGVTATDLVLTVTQMLRKHGVVGKFVEF 376

Query: 219 YGDGMRRLSLADRATIANMAPEYGASMGFFPVDNVTLQYLKLTGRSEETVAMIEAYLREN 278
           YG+GM  LSLADRATIANM+PEYGA+MGFFPVD+VTLQYLKLTGRS+ETVAMIEAYLR N
Sbjct: 377 YGNGMSGLSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRSDETVAMIEAYLRAN 436

Query: 279 KMFVDYDEPQQERVYSSYLELNLDEVEPCISVPKRPHDRVPLKEMKTDWHACLDSKVGYK 338
            MFVDY+EPQQ+RVYSSYLELNLD+VEPCIS PKRPHDRV LKEMK DWH+CLDSKVG+K
Sbjct: 437 NMFVDYNEPQQDRVYSSYLELNLDDVEPCISGPKRPHDRVTLKEMKADWHSCLDSKVGFK 496

Query: 339 GFLSIVEDAENKVAKFDFHGQPAELKDGSVVIALITSCTNTSNLSVMLEAGLVAKKAYEL 398
           GF +I ++A+ KV  F F GQPAELK GSVVIA ITSCTNTSN SVML AGLVAKKA +L
Sbjct: 497 GF-AIPKEAQEKVVNFSFDGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACDL 555

Query: 399 GLQVKPWVKTSLTPVSGVVTEYLLQSGLQKYLNEQGFQIVGFGCTTGIGNSGDLDKSVAS 458
           GLQVKPW+KTSL P SGVVT+YLL+SGLQ+YLNEQGF IVG+GCTT IGNSG++++SV +
Sbjct: 556 GLQVKPWIKTSLAPGSGVVTKYLLKSGLQEYLNEQGFNIVGYGCTTCIGNSGEINESVGA 615

Query: 459 AISENDIRAAAVFSGNRNVEGRVPRVHPLTQTNLLV 494
           AI+ENDI AAAV SGNRN EG   RVHPLT+ N L 
Sbjct: 616 AITENDIVAAAVLSGNRNFEG---RVHPLTRANYLA 648


>AT4G35830.1 | Symbols: ACO1 | aconitase 1 | chr4:16973007-16977949
           REVERSE LENGTH=898
          Length = 898

 Score =  701 bits (1810), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/515 (68%), Positives = 420/515 (81%), Gaps = 27/515 (5%)

Query: 1   MLESAIRNCHWGQDITKEDVEMIIDWESSSTKQVEIPFIPARVLLQDFTQVPANVILACI 60
           +LESAIRNC   Q +  +DVE I+DWE++S KQVEIPF PARVLLQDFT VPA V LAC+
Sbjct: 46  LLESAIRNCDEFQ-VKSKDVEKILDWENTSPKQVEIPFKPARVLLQDFTGVPAVVDLACM 104

Query: 61  RD-------------DLVSVNLVTGHSVEVDVA--------NLELEFQRSKEICDSRRRV 99
           RD              LV V+LV  HSV+VDVA        N+ELEFQR+KE     +  
Sbjct: 105 RDAMNNLGGDSNKINPLVPVDLVIDHSVQVDVARSENAVQANMELEFQRNKERFAFLKWG 164

Query: 100 SKSCHNMLVVPPGSG-PHQVNLEYLSSVVFNAEGLLYPDSVVGIDSHTTMINGLGVSGWG 158
           S + HNMLVVPPGSG  HQVNLEYL+ VVFN  GLLYPDSVVG DSHTTMI+GLGV+GWG
Sbjct: 165 SNAFHNMLVVPPGSGIVHQVNLEYLARVVFNTNGLLYPDSVVGTDSHTTMIDGLGVAGWG 224

Query: 159 VGRIEAEAVMYGKPMNMILPCVVGFKLSGKLRNGITTTDLALTITQILREHGVVGKFVEF 218
           VG IEAEA M G+PM+M+LP VVGFKL+GKLR+G+T TDL LT+TQ+LR+HGVVGKFVEF
Sbjct: 225 VGGIEAEATMLGQPMSMVLPGVVGFKLTGKLRDGMTATDLVLTVTQMLRKHGVVGKFVEF 284

Query: 219 YGDGMRRLSLADRATIANMAPEYGASMGFFPVDNVTLQYLKLTGRSEETVAMIEAYLREN 278
           +G+GMR LSLADRATIANM+PEYGA+MGFFPVD+VTLQYL+LTGRS++TV+MIEAYLR N
Sbjct: 285 HGEGMRELSLADRATIANMSPEYGATMGFFPVDHVTLQYLRLTGRSDDTVSMIEAYLRAN 344

Query: 279 KMFVDYDEPQQERVYSSYLELNLDEVEPCISVPKRPHDRVPLKEMKTDWHACLDSKVGYK 338
           KMFVDY EP+ + VYSS LELNL++VEPC+S PKRPHDRVPLKEMK DWH+CLD++VG+K
Sbjct: 345 KMFVDYSEPESKTVYSSCLELNLEDVEPCVSGPKRPHDRVPLKEMKADWHSCLDNRVGFK 404

Query: 339 GFLSIVEDAENKVAKFDFHGQPAELKDGSVVIALITSCTNTSNLSVMLEAGLVAKKAYEL 398
           GF ++ ++A++K  +F+F+G  A+L+ G VVIA ITSCTNTSN SVML A LVAKKA +L
Sbjct: 405 GF-AVPKEAQSKAVEFNFNGTTAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACDL 463

Query: 399 GLQVKPWVKTSLTPVSGVVTEYLLQSGLQKYLNEQGFQIVGFGCTTGIGNSGDLDKSVAS 458
           GL+VKPW+KTSL P SGVVT+YL +SGLQKYLN+ GF IVG+GCTT IGNSGD+ ++VAS
Sbjct: 464 GLEVKPWIKTSLAPGSGVVTKYLAKSGLQKYLNQLGFSIVGYGCTTCIGNSGDIHEAVAS 523

Query: 459 AISENDIRAAAVFSGNRNVEGRVPRVHPLTQTNLL 493
           AI +ND+ A+AV SGNRN EG   RVHPLT+ N L
Sbjct: 524 AIVDNDLVASAVLSGNRNFEG---RVHPLTRANYL 555


>AT4G26970.1 | Symbols: ACO2 | aconitase 2 | chr4:13543077-13548427
           FORWARD LENGTH=995
          Length = 995

 Score =  682 bits (1760), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/516 (67%), Positives = 408/516 (79%), Gaps = 27/516 (5%)

Query: 1   MLESAIRNCHWGQDITKEDVEMIIDWESSSTKQVEIPFIPARVLLQDFTQVPANVILACI 60
           +LESAIRNC   Q +TK+DVE I+DWE++STKQVEI F PARV+LQDFT VP  V LA +
Sbjct: 143 LLESAIRNCDNYQ-VTKDDVEKILDWENTSTKQVEIAFKPARVILQDFTGVPVLVDLASM 201

Query: 61  RD-------------DLVSVNLVTGHSVEVDVA--------NLELEFQRSKEICDSRRRV 99
           RD              LV V+LV  HS++VD A        NLELEF+R+KE     +  
Sbjct: 202 RDAVKNLGSDPSKINPLVPVDLVVDHSIQVDFARSEDAAQKNLELEFKRNKERFTFLKWG 261

Query: 100 SKSCHNMLVVPPGSG-PHQVNLEYLSSVVFNAEGLLYPDSVVGIDSHTTMINGLGVSGWG 158
           S +  NMLVVPPGSG  HQVNLEYL  VVFN++G LYPDSVVG DSHTTMI+GLGV+GWG
Sbjct: 262 STAFQNMLVVPPGSGIVHQVNLEYLGRVVFNSKGFLYPDSVVGTDSHTTMIDGLGVAGWG 321

Query: 159 VGRIEAEAVMYGKPMNMILPCVVGFKLSGKLRNGITTTDLALTITQILREHGVVGKFVEF 218
           VG IEAEA M G+PM+M+LP VVGFKL GKL+ G+T TDL LT+TQILR+HGVVGKFVEF
Sbjct: 322 VGGIEAEAAMLGQPMSMVLPGVVGFKLDGKLKEGVTATDLVLTVTQILRKHGVVGKFVEF 381

Query: 219 YGDGMRRLSLADRATIANMAPEYGASMGFFPVDNVTLQYLKLTGRSEETVAMIEAYLREN 278
           YG+GM  LSLADRATIANM+PEYGA+MGFFPVD+VTL+YLKLTGRS+ETV+MIE+YLR N
Sbjct: 382 YGEGMSELSLADRATIANMSPEYGATMGFFPVDHVTLEYLKLTGRSDETVSMIESYLRAN 441

Query: 279 KMFVDYDEPQQERVYSSYLELNLDEVEPCISVPKRPHDRVPLKEMKTDWHACLDSKVGYK 338
            MFVDY+EPQQER Y+SYL+L+L  VEPCIS PKRPHDRVPLK+MK DWHACLD+ VG+K
Sbjct: 442 NMFVDYNEPQQERAYTSYLQLDLGHVEPCISGPKRPHDRVPLKDMKADWHACLDNPVGFK 501

Query: 339 GFLSIVEDAENKVAKFDFHGQPAELKDGSVVIALITSCTNTSNLSVMLEAGLVAKKAYEL 398
           GF ++ ++ + +V KF ++GQPAE+K GSVVIA ITSCTNTSN SVM+ A LVAKKA +L
Sbjct: 502 GF-AVPKEKQEEVVKFSYNGQPAEIKHGSVVIAAITSCTNTSNPSVMIGAALVAKKASDL 560

Query: 399 GLQVKPWVKTSLTPVSGVVTEYLLQSGLQKYLNEQGFQIVGFGCTTGIGNSGDLDKSVAS 458
           GL+VKPWVKTSL P S VV +YL +SGL++ L +QGF+IVG+GCTT IGNSG+LD  VAS
Sbjct: 561 GLKVKPWVKTSLAPGSRVVEKYLDRSGLRESLTKQGFEIVGYGCTTCIGNSGNLDPEVAS 620

Query: 459 AISENDIRAAAVFSGNRNVEGRVPRVHPLTQTNLLV 494
           AI   DI  AAV SGNRN EG   RVHP T+ N L 
Sbjct: 621 AIEGTDIIPAAVLSGNRNFEG---RVHPQTRANYLA 653


>AT4G35830.2 | Symbols: ACO1 | aconitase 1 | chr4:16973007-16977278
           REVERSE LENGTH=795
          Length = 795

 Score =  628 bits (1619), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 309/439 (70%), Positives = 370/439 (84%), Gaps = 13/439 (2%)

Query: 64  LVSVNLVTGHSVEVDVA--------NLELEFQRSKEICDSRRRVSKSCHNMLVVPPGSG- 114
           LV V+LV  HSV+VDVA        N+ELEFQR+KE     +  S + HNMLVVPPGSG 
Sbjct: 18  LVPVDLVIDHSVQVDVARSENAVQANMELEFQRNKERFAFLKWGSNAFHNMLVVPPGSGI 77

Query: 115 PHQVNLEYLSSVVFNAEGLLYPDSVVGIDSHTTMINGLGVSGWGVGRIEAEAVMYGKPMN 174
            HQVNLEYL+ VVFN  GLLYPDSVVG DSHTTMI+GLGV+GWGVG IEAEA M G+PM+
Sbjct: 78  VHQVNLEYLARVVFNTNGLLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEATMLGQPMS 137

Query: 175 MILPCVVGFKLSGKLRNGITTTDLALTITQILREHGVVGKFVEFYGDGMRRLSLADRATI 234
           M+LP VVGFKL+GKLR+G+T TDL LT+TQ+LR+HGVVGKFVEF+G+GMR LSLADRATI
Sbjct: 138 MVLPGVVGFKLTGKLRDGMTATDLVLTVTQMLRKHGVVGKFVEFHGEGMRELSLADRATI 197

Query: 235 ANMAPEYGASMGFFPVDNVTLQYLKLTGRSEETVAMIEAYLRENKMFVDYDEPQQERVYS 294
           ANM+PEYGA+MGFFPVD+VTLQYL+LTGRS++TV+MIEAYLR NKMFVDY EP+ + VYS
Sbjct: 198 ANMSPEYGATMGFFPVDHVTLQYLRLTGRSDDTVSMIEAYLRANKMFVDYSEPESKTVYS 257

Query: 295 SYLELNLDEVEPCISVPKRPHDRVPLKEMKTDWHACLDSKVGYKGFLSIVEDAENKVAKF 354
           S LELNL++VEPC+S PKRPHDRVPLKEMK DWH+CLD++VG+KGF ++ ++A++K  +F
Sbjct: 258 SCLELNLEDVEPCVSGPKRPHDRVPLKEMKADWHSCLDNRVGFKGF-AVPKEAQSKAVEF 316

Query: 355 DFHGQPAELKDGSVVIALITSCTNTSNLSVMLEAGLVAKKAYELGLQVKPWVKTSLTPVS 414
           +F+G  A+L+ G VVIA ITSCTNTSN SVML A LVAKKA +LGL+VKPW+KTSL P S
Sbjct: 317 NFNGTTAQLRHGDVVIAAITSCTNTSNPSVMLGAALVAKKACDLGLEVKPWIKTSLAPGS 376

Query: 415 GVVTEYLLQSGLQKYLNEQGFQIVGFGCTTGIGNSGDLDKSVASAISENDIRAAAVFSGN 474
           GVVT+YL +SGLQKYLN+ GF IVG+GCTT IGNSGD+ ++VASAI +ND+ A+AV SGN
Sbjct: 377 GVVTKYLAKSGLQKYLNQLGFSIVGYGCTTCIGNSGDIHEAVASAIVDNDLVASAVLSGN 436

Query: 475 RNVEGRVPRVHPLTQTNLL 493
           RN EG   RVHPLT+ N L
Sbjct: 437 RNFEG---RVHPLTRANYL 452


>AT4G13430.1 | Symbols: IIL1, ATLEUC1 | isopropyl malate isomerase
           large subunit 1 | chr4:7804194-7807789 REVERSE
           LENGTH=509
          Length = 509

 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 92/215 (42%), Gaps = 21/215 (9%)

Query: 114 GPHQVNLEY--LSSVVFNAEGLLYPDSVV-GIDSHTTMINGLGVSGWGVGRIEAEAVMYG 170
           G  + N +Y  +  V    EG   P  V+ G DSHT      G    G+G  +A  V+  
Sbjct: 167 GNFKANPDYKGVCHVALAQEGHCRPGEVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGT 226

Query: 171 KPMNMILPCVVGFKLSGKLRNGITTTDLALTITQILREHGVVGKFVEFYGDGMRRLSLAD 230
             + + +P  + F L G++ + +   DL L I   +   G   K +EF G  +  LS+ +
Sbjct: 227 GKILLKVPPTMRFILDGEMPSYLQAKDLILQIIGEISVAGATYKTMEFSGTTIESLSMEE 286

Query: 231 RATIANMAPEYGASMGFFPVDNVTLQYLKLTGRSEETVAMIEAYLRENKMFV-DYDEPQQ 289
           R T+ NM  E G   G  P D  TL Y++    +  +V     Y   N  FV DY     
Sbjct: 287 RMTLCNMVVEAGGKNGVIPPDATTLNYVE----NRTSVPFEPVYSDGNASFVADY----- 337

Query: 290 ERVYSSYLELNLDEVEPCISVPKRPHDRVPLKEMK 324
                     ++ ++EP ++ P  P +R   +E K
Sbjct: 338 --------RFDVSKLEPVVAKPHSPDNRALARECK 364