Miyakogusa Predicted Gene
- Lj0g3v0292969.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0292969.1 tr|G7JTZ1|G7JTZ1_MEDTR Transcription factor
bHLH25 OS=Medicago truncatula GN=MTR_4g092700 PE=4
SV=1,62.7,0,SUBFAMILY NOT NAMED,NULL; CIRCADIAN PROTEIN
CLOCK/ARNT/BMAL/PAS,NULL; coiled-coil,NULL;
HLH,Helix-lo,gene.g22770.t1.1
(292 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G37850.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 182 2e-46
AT2G22760.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 164 6e-41
AT2G22770.1 | Symbols: NAI1 | basic helix-loop-helix (bHLH) DNA-... 153 1e-37
AT2G22750.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 149 3e-36
AT2G22750.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 145 3e-35
AT2G46510.1 | Symbols: ATAIB, AIB | ABA-inducible BHLH-type tran... 82 4e-16
AT4G09820.1 | Symbols: TT8, BHLH42 | basic helix-loop-helix (bHL... 79 3e-15
AT1G01260.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 77 2e-14
AT1G01260.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 77 2e-14
AT1G01260.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 77 2e-14
AT4G17880.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-bind... 76 2e-14
AT5G46760.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-bind... 76 2e-14
AT1G32640.1 | Symbols: ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1 |... 75 4e-14
AT1G12860.1 | Symbols: SCRM2, ICE2 | basic helix-loop-helix (bHL... 75 7e-14
AT4G16430.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 73 2e-13
AT3G26744.4 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel... 69 3e-12
AT3G26744.2 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel... 69 3e-12
AT3G26744.1 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-hel... 69 3e-12
AT5G57150.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 68 6e-12
AT5G57150.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 68 7e-12
AT5G57150.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 68 7e-12
AT5G57150.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 68 7e-12
AT4G29930.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 67 1e-11
AT2G16910.1 | Symbols: AMS | basic helix-loop-helix (bHLH) DNA-b... 67 2e-11
AT3G61950.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 66 3e-11
AT3G61950.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 66 3e-11
AT5G10570.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 65 4e-11
AT5G41315.1 | Symbols: GL3, MYC6.2 | basic helix-loop-helix (bHL... 65 7e-11
AT1G63650.3 | Symbols: EGL3 | basic helix-loop-helix (bHLH) DNA-... 65 7e-11
AT1G63650.2 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-he... 65 7e-11
AT1G63650.1 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-he... 65 7e-11
AT4G00870.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 62 4e-10
AT5G46830.1 | Symbols: ATNIG1, NIG1 | NACL-inducible gene 1 | ch... 62 5e-10
AT4G29930.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 60 2e-09
AT4G29930.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 59 3e-09
AT4G29930.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 59 4e-09
AT5G65640.1 | Symbols: bHLH093 | beta HLH protein 93 | chr5:2623... 59 6e-09
AT2G28160.1 | Symbols: FIT1, ATBHLH029, FRU, BHLH029, ATBHLH29, ... 58 8e-09
AT5G58010.1 | Symbols: LRL3 | LJRHL1-like 3 | chr5:23483670-2348... 54 1e-07
AT2G46810.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 54 1e-07
AT4G00050.1 | Symbols: UNE10 | basic helix-loop-helix (bHLH) DNA... 54 2e-07
AT5G65640.2 | Symbols: bHLH093 | beta HLH protein 93 | chr5:2623... 54 2e-07
AT5G67110.1 | Symbols: ALC | basic helix-loop-helix (bHLH) DNA-b... 54 2e-07
AT4G38070.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 53 2e-07
AT2G40200.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 53 2e-07
AT3G21330.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 53 3e-07
AT4G30980.1 | Symbols: LRL2 | LJRHL1-like 2 | chr4:15079489-1508... 52 4e-07
AT2G31210.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 52 4e-07
AT4G36930.1 | Symbols: SPT | basic helix-loop-helix (bHLH) DNA-b... 52 5e-07
AT2G24260.1 | Symbols: LRL1 | LJRHL1-like 1 | chr2:10319646-1032... 52 6e-07
AT1G09530.2 | Symbols: PIF3, POC1, PAP3 | phytochrome interactin... 51 8e-07
AT1G09530.1 | Symbols: PIF3, POC1, PAP3 | phytochrome interactin... 51 8e-07
AT4G01460.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 51 8e-07
AT3G24140.1 | Symbols: FMA | basic helix-loop-helix (bHLH) DNA-b... 51 1e-06
AT1G10610.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 50 1e-06
AT2G20180.3 | Symbols: PIL5 | phytochrome interacting factor 3-l... 49 3e-06
AT2G20180.2 | Symbols: PIL5 | phytochrome interacting factor 3-l... 49 3e-06
AT3G06120.1 | Symbols: MUTE | basic helix-loop-helix (bHLH) DNA-... 49 3e-06
AT2G20180.1 | Symbols: PIL5, PIF1 | phytochrome interacting fact... 49 4e-06
AT4G00120.1 | Symbols: IND1, GT140, IND, EDA33 | basic helix-loo... 49 5e-06
AT4G28800.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 49 5e-06
AT5G46690.1 | Symbols: bHLH071 | beta HLH protein 71 | chr5:1894... 49 5e-06
AT5G56960.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 49 5e-06
AT5G62610.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 48 7e-06
AT4G00480.1 | Symbols: ATMYC1, myc1 | basic helix-loop-helix (bH... 48 1e-05
>AT4G37850.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:17796362-17797647 REVERSE
LENGTH=328
Length = 328
Score = 182 bits (462), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 99/183 (54%), Positives = 132/183 (72%), Gaps = 17/183 (9%)
Query: 125 SQPQDHIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKVRALEEE 184
S QDHIIAERKRREKL+Q+F+ALSALVPGL+KMDKASVLGD +K++K LQE+V L EE
Sbjct: 148 SNAQDHIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGEL-EE 206
Query: 185 QNLKKNVQSVVIVKKSQL---------------GSFDKELPEIEARFCERNVLIRVHCEK 229
Q ++ ++S+V+VKKS+L G D +LPEIE RF + +VLI++ CEK
Sbjct: 207 QKKERRLESMVLVKKSKLILDDNNQSFSSSCEDGFSDLDLPEIEVRFSDEDVLIKILCEK 266
Query: 230 SKGVVEKTIHEIEKLHLKVINSTALTFGSCALDITIIAQMDVGFCMTVKDLVRKLRSAFT 289
KG + K + EIEKLH+ + NS+ L FG LDITIIA+ + F MT+ D+V+ LRSA +
Sbjct: 267 QKGHLAKIMAEIEKLHILITNSSVLNFGPT-LDITIIAKKESDFDMTLMDVVKSLRSALS 325
Query: 290 SFM 292
+F+
Sbjct: 326 NFI 328
>AT2G22760.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:9678012-9679165 FORWARD
LENGTH=295
Length = 295
Score = 164 bits (415), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 84/176 (47%), Positives = 122/176 (69%), Gaps = 16/176 (9%)
Query: 128 QDHIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKVRALEEEQNL 187
++H++AERKRREKLS++FIALSAL+PGL+K DK ++L D I +KQLQE++R L+EE+
Sbjct: 118 KEHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQLRTLKEEKEA 177
Query: 188 KKNVQSVVIVKKSQLG---------------SFDKELPEIEARFCERNVLIRVHCEKSKG 232
+ ++S+++VKKS++ FD+ LPEIEA+ + ++LIR+ CEKSKG
Sbjct: 178 TRQMESMILVKKSKVFFDEEPNLSCSPSVHIEFDQALPEIEAKISQNDILIRILCEKSKG 237
Query: 233 VVEKTIHEIEKLHLKVINSTALTFGSCALDITIIAQMDVGFCMTV-KDLVRKLRSA 287
+ ++ IE L++ NS L FG LDIT++AQMD F M++ KDLVR LR A
Sbjct: 238 CMINILNTIENFQLRIENSIVLPFGDSTLDITVLAQMDKDFSMSILKDLVRNLRLA 293
>AT2G22770.1 | Symbols: NAI1 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr2:9684858-9686321
FORWARD LENGTH=320
Length = 320
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 124/189 (65%), Gaps = 27/189 (14%)
Query: 128 QDHIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKVRALEEEQNL 187
++H++AERKRR+KL+++ IALSAL+PGL+K DKA+VL D IK+LKQLQE+V+ LEEE+ +
Sbjct: 131 KEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKKLEEERVV 190
Query: 188 KKNV-QSVVIVKKSQ--------------------------LGSFDKELPEIEARFCERN 220
K + QS+++VK+SQ + F + +P IEAR +R+
Sbjct: 191 TKKMDQSIILVKRSQVYLDDDSSSYSSTCSAASPLSSSSDEVSIFKQTMPMIEARVSDRD 250
Query: 221 VLIRVHCEKSKGVVEKTIHEIEKLHLKVINSTALTFGSCALDITIIAQMDVGFCMTVKDL 280
+LIRVHCEK+KG + K + +EK L+V+NS L FG+ L ITI+ +MD F V+++
Sbjct: 251 LLIRVHCEKNKGCMIKILSSLEKFRLEVVNSFTLPFGNSTLVITILTKMDNKFSRPVEEV 310
Query: 281 VRKLRSAFT 289
V+ +R A
Sbjct: 311 VKNIRVALA 319
>AT2G22750.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:9672145-9673624 FORWARD
LENGTH=305
Length = 305
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/184 (51%), Positives = 122/184 (66%), Gaps = 21/184 (11%)
Query: 119 LTRPKLSQPQDHIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKV 178
LTR + S QDHI+AERKRREKL+Q+F+ALSAL+PGL+KMDKASVLGD IK++K LQE V
Sbjct: 117 LTRSQ-SNAQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESV 175
Query: 179 RALEEEQNLKKNVQSVVIVKKSQL------------------GSFDKELPEIEARFCERN 220
+ EE++ +K ++SVV+VKKS L S LPEIE R ++
Sbjct: 176 KEYEEQK-KEKTMESVVLVKKSSLVLDENHQPSSSSSSDGNRNSSSSNLPEIEVRVSGKD 234
Query: 221 VLIRVHCEKSKGVVEKTIHEIEKLHLKVINSTALTFGSCALDITIIAQMDVGFCMTVKDL 280
VLI++ CEK KG V K + EIEKL L + NS L FG DI+IIAQ + F M ++D+
Sbjct: 235 VLIKILCEKQKGNVIKIMGEIEKLGLSITNSNVLPFGP-TFDISIIAQKNNNFDMKIEDV 293
Query: 281 VRKL 284
V+ L
Sbjct: 294 VKNL 297
>AT2G22750.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:9672145-9673624 FORWARD
LENGTH=304
Length = 304
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/184 (51%), Positives = 122/184 (66%), Gaps = 22/184 (11%)
Query: 119 LTRPKLSQPQDHIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKV 178
LTR + S QDHI+AERKRREKL+Q+F+ALSAL+PGL+KMDKASVLGD IK++K LQE V
Sbjct: 117 LTRSQ-SNAQDHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESV 175
Query: 179 RALEEEQNLKKNVQSVVIVKKSQL------------------GSFDKELPEIEARFCERN 220
+ EE++ +K ++SVV+VKKS L S LPEIE R ++
Sbjct: 176 KEYEEQK-KEKTMESVVLVKKSSLVLDENHQPSSSSSSDGNRNSSSSNLPEIEVRVSGKD 234
Query: 221 VLIRVHCEKSKGVVEKTIHEIEKLHLKVINSTALTFGSCALDITIIAQMDVGFCMTVKDL 280
VLI++ CEK KG V K + EIEKL L + NS L FG DI+IIAQ + F M ++D+
Sbjct: 235 VLIKILCEKQKGNVIKIMGEIEKLGLSITNSNVLPFGP-TFDISIIAQNN-NFDMKIEDV 292
Query: 281 VRKL 284
V+ L
Sbjct: 293 VKNL 296
>AT2G46510.1 | Symbols: ATAIB, AIB | ABA-inducible BHLH-type
transcription factor | chr2:19091187-19092887 REVERSE
LENGTH=566
Length = 566
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 69/100 (69%), Gaps = 6/100 (6%)
Query: 126 QPQDHIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKVRALEEEQ 185
+P +H+ AER+RREKL+Q+F AL ++VP + KMDKAS+LGD I Y+K+LQEKV+ +E+E+
Sbjct: 392 EPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIMEDER 451
Query: 186 NLKKNVQSVVIVKKSQLGSFDKELPEIEARFCERNVLIRV 225
V + + +S + + E PE++ + V++RV
Sbjct: 452 -----VGTDKSLSESNTITVE-ESPEVDIQAMNEEVVVRV 485
>AT4G09820.1 | Symbols: TT8, BHLH42 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:6182067-6186261
FORWARD LENGTH=518
Length = 518
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 71/118 (60%), Gaps = 12/118 (10%)
Query: 117 KILTRPKLSQPQDHIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQE 176
K L R LS H++AER+RREKL+++FI L ++VP + KMDK S+LGDTI Y+ L++
Sbjct: 355 KRLPREDLS----HVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRK 410
Query: 177 KVRALEEEQNLKKNVQSVVIVKKSQLGSFDKELPEIEARFCERNVLIRVHCEKSKGVV 234
+V LE + +++ ++ +K+ E+E E +VL+ + CE G++
Sbjct: 411 RVHELENTHHEQQHKRTRTCKRKTS--------EEVEVSIIENDVLLEMRCEYRDGLL 460
>AT1G01260.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:109595-111367 FORWARD
LENGTH=590
Length = 590
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 69/124 (55%), Gaps = 10/124 (8%)
Query: 129 DHIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKVRALEEEQNLK 188
+H+ AER+RREKL+Q+F AL ++VP + KMDKAS+LGD + Y+ +L K++ +E E+
Sbjct: 433 NHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEAERERL 492
Query: 189 KNVQSVVIVKKSQLGSFDKELPEIEARFCERNVLIRVHCEKSKGVVEKTIHEIEKLHLKV 248
+ I S D +I + +V +R++C + H E+ ++V
Sbjct: 493 GYSSNPPI-------SLDS---DINVQTSGEDVTVRINCPLESHPASRIFHAFEESKVEV 542
Query: 249 INST 252
INS
Sbjct: 543 INSN 546
>AT1G01260.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:109595-111367 FORWARD
LENGTH=590
Length = 590
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 69/124 (55%), Gaps = 10/124 (8%)
Query: 129 DHIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKVRALEEEQNLK 188
+H+ AER+RREKL+Q+F AL ++VP + KMDKAS+LGD + Y+ +L K++ +E E+
Sbjct: 433 NHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEAERERL 492
Query: 189 KNVQSVVIVKKSQLGSFDKELPEIEARFCERNVLIRVHCEKSKGVVEKTIHEIEKLHLKV 248
+ I S D +I + +V +R++C + H E+ ++V
Sbjct: 493 GYSSNPPI-------SLDS---DINVQTSGEDVTVRINCPLESHPASRIFHAFEESKVEV 542
Query: 249 INST 252
INS
Sbjct: 543 INSN 546
>AT1G01260.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:109595-111367 FORWARD
LENGTH=590
Length = 590
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 69/124 (55%), Gaps = 10/124 (8%)
Query: 129 DHIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKVRALEEEQNLK 188
+H+ AER+RREKL+Q+F AL ++VP + KMDKAS+LGD + Y+ +L K++ +E E+
Sbjct: 433 NHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEAERERL 492
Query: 189 KNVQSVVIVKKSQLGSFDKELPEIEARFCERNVLIRVHCEKSKGVVEKTIHEIEKLHLKV 248
+ I S D +I + +V +R++C + H E+ ++V
Sbjct: 493 GYSSNPPI-------SLDS---DINVQTSGEDVTVRINCPLESHPASRIFHAFEESKVEV 542
Query: 249 INST 252
INS
Sbjct: 543 INSN 546
>AT4G17880.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-binding
family protein | chr4:9933702-9935471 REVERSE LENGTH=589
Length = 589
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 82/136 (60%), Gaps = 14/136 (10%)
Query: 126 QPQDHIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKVRALE-EE 184
+P +H+ AER+RREKL+Q+F +L A+VP + KMDKAS+LGD I Y+ +L+ K++ E ++
Sbjct: 413 EPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELKSKLQKAESDK 472
Query: 185 QNLKK----------NVQSVVIVKK--SQLGSFDKELPEIEARFCERNVLIRVHCEKSKG 232
+ L+K N +S V +K +Q S E+ E++ + + +IR+ C K
Sbjct: 473 EELQKQIDVMNKEAGNAKSSVKDRKCLNQESSVLIEM-EVDVKIIGWDAMIRIQCSKRNH 531
Query: 233 VVEKTIHEIEKLHLKV 248
K + +++L L+V
Sbjct: 532 PGAKFMEALKELDLEV 547
>AT5G46760.1 | Symbols: | Basic helix-loop-helix (bHLH) DNA-binding
family protein | chr5:18974231-18976009 FORWARD
LENGTH=592
Length = 592
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 76/139 (54%), Gaps = 16/139 (11%)
Query: 126 QPQDHIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQL----------- 174
+P +H+ AER+RREKL+Q+F +L A+VP + KMDKAS+LGD I Y+ +L
Sbjct: 412 EPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSKLQQAESDK 471
Query: 175 ---QEKVRALEEEQNLKKNVQSVVIVKKS--QLGSFDKELPEIEARFCERNVLIRVHCEK 229
Q+K+ + +E N K S +KS Q + EI+ + +V+IRV C K
Sbjct: 472 EEIQKKLDGMSKEGNNGKGCGSRAKERKSSNQDSTASSIEMEIDVKIIGWDVMIRVQCGK 531
Query: 230 SKGVVEKTIHEIEKLHLKV 248
+ + +++L L+V
Sbjct: 532 KDHPGARFMEALKELDLEV 550
>AT1G32640.1 | Symbols: ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1 |
Basic helix-loop-helix (bHLH) DNA-binding family protein
| chr1:11799042-11800913 REVERSE LENGTH=623
Length = 623
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 73/136 (53%), Gaps = 13/136 (9%)
Query: 126 QPQDHIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKVRALEEEQ 185
+P +H+ AER+RREKL+Q+F AL A+VP + KMDKAS+LGD I Y+ +L+ KV E E+
Sbjct: 449 EPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKVVKTESEK 508
Query: 186 -NLKKNVQSV---VIVKKSQLGSFDKELP---------EIEARFCERNVLIRVHCEKSKG 232
+K ++ V + +K+ D EIE + + +IRV K
Sbjct: 509 LQIKNQLEEVKLELAGRKASASGGDMSSSCSSIKPVGMEIEVKIIGWDAMIRVESSKRNH 568
Query: 233 VVEKTIHEIEKLHLKV 248
+ + + L L+V
Sbjct: 569 PAARLMSALMDLELEV 584
>AT1G12860.1 | Symbols: SCRM2, ICE2 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:4384758-4386392
FORWARD LENGTH=450
Length = 450
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 78/156 (50%), Gaps = 20/156 (12%)
Query: 127 PQDHIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKVRALEEE-- 184
P +++AER+RR+KL+ + L ++VP + KMD+AS+LGD I YLK+L +++ L E
Sbjct: 265 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHTELE 324
Query: 185 ----------------QNLKKNVQSVVIVKKSQLGSFDKELPEIEARFCE-RNVLIRVHC 227
Q L V+ + S L S + P +E R E + V I + C
Sbjct: 325 STPPSSSSLHPLTPTPQTLSYRVKE-ELCPSSSLPSPKGQQPRVEVRLREGKAVNIHMFC 383
Query: 228 EKSKGVVEKTIHEIEKLHLKVINSTALTFGSCALDI 263
+ G++ T+ ++ L L V + F ALD+
Sbjct: 384 GRRPGLLLSTMRALDNLGLDVQQAVISCFNGFALDV 419
>AT4G16430.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:9267599-9269002 FORWARD
LENGTH=467
Length = 467
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 48/65 (73%)
Query: 129 DHIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKVRALEEEQNLK 188
+H+ AER+RREKL+Q+F AL A+VP + KMDKAS+L D I Y+ +Q+K+R E E+ +
Sbjct: 320 NHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKKIRVYETEKQIM 379
Query: 189 KNVQS 193
K +S
Sbjct: 380 KRRES 384
>AT3G26744.4 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr3:9832953-9834790 REVERSE LENGTH=494
Length = 494
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 22/159 (13%)
Query: 127 PQDHIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKVRALEEE-- 184
P +++AER+RR+KL+ + L ++VP + KMD+AS+LGD I YLK+L +++ L E
Sbjct: 305 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELE 364
Query: 185 --------------QNLKKNVQSVVIVKK-----SQLGSFDKELPEIEARFCE-RNVLIR 224
L Q++ K S L S + +E R E R V I
Sbjct: 365 STPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVNIH 424
Query: 225 VHCEKSKGVVEKTIHEIEKLHLKVINSTALTFGSCALDI 263
+ C + G++ T+ ++ L L V + F ALD+
Sbjct: 425 MFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALDV 463
>AT3G26744.2 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr3:9832953-9834790 REVERSE LENGTH=494
Length = 494
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 22/159 (13%)
Query: 127 PQDHIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKVRALEEE-- 184
P +++AER+RR+KL+ + L ++VP + KMD+AS+LGD I YLK+L +++ L E
Sbjct: 305 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELE 364
Query: 185 --------------QNLKKNVQSVVIVKK-----SQLGSFDKELPEIEARFCE-RNVLIR 224
L Q++ K S L S + +E R E R V I
Sbjct: 365 STPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVNIH 424
Query: 225 VHCEKSKGVVEKTIHEIEKLHLKVINSTALTFGSCALDI 263
+ C + G++ T+ ++ L L V + F ALD+
Sbjct: 425 MFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALDV 463
>AT3G26744.1 | Symbols: ICE1, ATICE1, SCRM | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr3:9832953-9834790 REVERSE LENGTH=494
Length = 494
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 22/159 (13%)
Query: 127 PQDHIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKVRALEEE-- 184
P +++AER+RR+KL+ + L ++VP + KMD+AS+LGD I YLK+L +++ L E
Sbjct: 305 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELE 364
Query: 185 --------------QNLKKNVQSVVIVKK-----SQLGSFDKELPEIEARFCE-RNVLIR 224
L Q++ K S L S + +E R E R V I
Sbjct: 365 STPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVRLREGRAVNIH 424
Query: 225 VHCEKSKGVVEKTIHEIEKLHLKVINSTALTFGSCALDI 263
+ C + G++ T+ ++ L L V + F ALD+
Sbjct: 425 MFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALDV 463
>AT5G57150.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154801 FORWARD
LENGTH=264
Length = 264
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 79/154 (51%), Gaps = 21/154 (13%)
Query: 125 SQPQDHIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKVRALEEE 184
S +I++ER RR+KL+Q+ AL ++VP + KMDKAS++ D I Y++ LQ + + LE E
Sbjct: 51 SPASKNIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAE 110
Query: 185 -QNLKKNVQS------------VVIVKKSQLGSFDK-------ELPEIEARFC-ERNVLI 223
+ L+ +S +V V ++ D E+ E++ F ER +++
Sbjct: 111 IRELESTPKSSLSFSKDFDRDLLVPVTSKKMKQLDSGSSTSLIEVLELKVTFMGERTMVV 170
Query: 224 RVHCEKSKGVVEKTIHEIEKLHLKVINSTALTFG 257
V C K + K E L+LK++ S +F
Sbjct: 171 SVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFS 204
>AT5G57150.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154556 FORWARD
LENGTH=219
Length = 219
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 78/149 (52%), Gaps = 21/149 (14%)
Query: 130 HIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKVRALEEE----- 184
+I++ER RR+KL+Q+ AL ++VP + KMDKAS++ D I Y++ LQ + + LE E
Sbjct: 56 NIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELE 115
Query: 185 ----------QNLKKNVQSVVIVKK-SQLGSFDK----ELPEIEARFC-ERNVLIRVHCE 228
++ +++ V KK QL S E+ E++ F ER +++ V C
Sbjct: 116 STPKSSLSFSKDFDRDLLVPVTSKKMKQLDSGSSTSLIEVLELKVTFMGERTMVVSVTCN 175
Query: 229 KSKGVVEKTIHEIEKLHLKVINSTALTFG 257
K + K E L+LK++ S +F
Sbjct: 176 KRTDTMVKLCEVFESLNLKILTSNLTSFS 204
>AT5G57150.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23153293 FORWARD
LENGTH=226
Length = 226
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 78/149 (52%), Gaps = 21/149 (14%)
Query: 130 HIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKVRALEEE----- 184
+I++ER RR+KL+Q+ AL ++VP + KMDKAS++ D I Y++ LQ + + LE E
Sbjct: 56 NIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELE 115
Query: 185 ----------QNLKKNVQSVVIVKK-SQLGSFDK----ELPEIEARFC-ERNVLIRVHCE 228
++ +++ V KK QL S E+ E++ F ER +++ V C
Sbjct: 116 STPKSSLSFSKDFDRDLLVPVTSKKMKQLDSGSSTSLIEVLELKVTFMGERTMVVSVTCN 175
Query: 229 KSKGVVEKTIHEIEKLHLKVINSTALTFG 257
K + K E L+LK++ S +F
Sbjct: 176 KRTDTMVKLCEVFESLNLKILTSNLTSFS 204
>AT5G57150.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:23152361-23154872 FORWARD
LENGTH=247
Length = 247
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 78/149 (52%), Gaps = 21/149 (14%)
Query: 130 HIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKVRALEEE----- 184
+I++ER RR+KL+Q+ AL ++VP + KMDKAS++ D I Y++ LQ + + LE E
Sbjct: 55 NIVSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELE 114
Query: 185 ----------QNLKKNVQSVVIVKK-SQLGSFDK----ELPEIEARFC-ERNVLIRVHCE 228
++ +++ V KK QL S E+ E++ F ER +++ V C
Sbjct: 115 STPKSSLSFSKDFDRDLLVPVTSKKMKQLDSGSSTSLIEVLELKVTFMGERTMVVSVTCN 174
Query: 229 KSKGVVEKTIHEIEKLHLKVINSTALTFG 257
K + K E L+LK++ S +F
Sbjct: 175 KRTDTMVKLCEVFESLNLKILTSNLTSFS 203
>AT4G29930.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14647449 FORWARD
LENGTH=225
Length = 225
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 84/149 (56%), Gaps = 13/149 (8%)
Query: 130 HIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQL--QEK-----VRALE 182
++++ER RR+KL+Q+ AL ++VP + K+DKASV+ D+I Y+++L QEK +R LE
Sbjct: 55 NVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELE 114
Query: 183 EEQNLKKNVQSVVIVKKSQLGSFDKELPEIEARFC-ERNVLIRVHCEKSKGVVEKTIHEI 241
L +N +++ + E+ E++ + E+ V++ + C K + + + +
Sbjct: 115 SRSTLLENPMDY----STRVQHYPIEVLEMKVTWMGEKTVVVCITCSKKRETMVQLCKVL 170
Query: 242 EKLHLKVINSTALTFGSCALDITIIAQMD 270
E L+L ++ + +F S L T+ Q D
Sbjct: 171 ESLNLNILTTNFSSFTS-RLSTTLFLQAD 198
>AT2G16910.1 | Symbols: AMS | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr2:7331721-7334077
FORWARD LENGTH=571
Length = 571
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 85/177 (48%), Gaps = 38/177 (21%)
Query: 130 HIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKVRALEEEQNLKK 189
+++AER+RR+KL+ + AL +LVP + K+D+AS+LGD I Y+K+LQ + + L++E L++
Sbjct: 315 NLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDE--LEE 372
Query: 190 NVQSVVIVKKSQLG---------------SFDKELPEIE--------------------- 213
N ++ + Q G S + +P ++
Sbjct: 373 NSETEDGSNRPQGGMSLNGTVVTGFHPGLSCNSNVPSVKQDVDLENSNDKGQEMEPQVDV 432
Query: 214 ARFCERNVLIRVHCEKSKGVVEKTIHEIEKLHLKVINSTALTFGSCALDITIIAQMD 270
A+ R ++V CE G + + ++ L L+V N+ + S ++ + + D
Sbjct: 433 AQLDGREFFVKVICEYKPGGFTRLMEALDSLGLEVTNANTTRYLSLVSNVFKVEKND 489
>AT3G61950.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:22940231-22941332 FORWARD
LENGTH=307
Length = 307
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 77/135 (57%), Gaps = 14/135 (10%)
Query: 129 DHIIAERKRREKLSQQFIALSALVPG--LQKMDKASVLGDTIKYLKQLQEKVRALEEEQN 186
+HI ER RR ++++ +L AL+P +Q+ D+AS++G I Y+K L++ +++LE ++
Sbjct: 128 NHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQIIQSLESQKR 187
Query: 187 LKKNVQSVVIVKK----SQLGSFDKE--------LPEIEARFCERNVLIRVHCEKSKGVV 234
++ S V+ S + S D +P+IEA + +V ++V CEK +G +
Sbjct: 188 TQQQSNSEVVENALNHLSGISSNDLWTTLEDQTCIPKIEATVIQNHVSLKVQCEKKQGQL 247
Query: 235 EKTIHEIEKLHLKVI 249
K I +EKL L V+
Sbjct: 248 LKGIISLEKLKLTVL 262
>AT3G61950.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:22939661-22941332 FORWARD
LENGTH=358
Length = 358
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 77/135 (57%), Gaps = 14/135 (10%)
Query: 129 DHIIAERKRREKLSQQFIALSALVPG--LQKMDKASVLGDTIKYLKQLQEKVRALEEEQN 186
+HI ER RR ++++ +L AL+P +Q+ D+AS++G I Y+K L++ +++LE ++
Sbjct: 179 NHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQIIQSLESQKR 238
Query: 187 LKKNVQSVVIVKK----SQLGSFDKE--------LPEIEARFCERNVLIRVHCEKSKGVV 234
++ S V+ S + S D +P+IEA + +V ++V CEK +G +
Sbjct: 239 TQQQSNSEVVENALNHLSGISSNDLWTTLEDQTCIPKIEATVIQNHVSLKVQCEKKQGQL 298
Query: 235 EKTIHEIEKLHLKVI 249
K I +EKL L V+
Sbjct: 299 LKGIISLEKLKLTVL 313
>AT5G10570.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:3341357-3342877 FORWARD
LENGTH=315
Length = 315
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 82/143 (57%), Gaps = 6/143 (4%)
Query: 108 FKTCQEDHKKILTRPKLSQPQDHIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDT 167
F + E +KK + QP +++AER+RR++L+ + L ++VP + KMD+ S+LGD
Sbjct: 130 FISIGETNKKRSNKKLEGQPSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDA 189
Query: 168 IKYLKQLQEKVRAL-EEEQNLKKNVQ-SVVIVKKSQLGSFDKELPEIEARFCERNVLIRV 225
I Y+K+L +K+ L E+EQ L N S +I +S + + K E++ R E N I +
Sbjct: 190 IDYMKELLDKINKLQEDEQELGSNSHLSTLITNESMVRNSLKF--EVDQR--EVNTHIDI 245
Query: 226 HCEKSKGVVEKTIHEIEKLHLKV 248
C G+V T+ +E L L++
Sbjct: 246 CCPTKPGLVVSTVSTLETLGLEI 268
>AT5G41315.1 | Symbols: GL3, MYC6.2 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr5:16529457-16532866
FORWARD LENGTH=637
Length = 637
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 60/98 (61%), Gaps = 5/98 (5%)
Query: 86 TINITTPLDMISQGNLEDQNYVFKTCQEDHKKILTRPKL-SQPQDHIIAERKRREKLSQQ 144
T +T P SQG L+ + + K +L P+ + +H + E+KRREKL+++
Sbjct: 401 TATVTAP----SQGMLKKIIFDVPRVHQKEKLMLDSPEARDETGNHAVLEKKRREKLNER 456
Query: 145 FIALSALVPGLQKMDKASVLGDTIKYLKQLQEKVRALE 182
F+ L ++P + K+DK S+L DTI+YL++L+ +V+ LE
Sbjct: 457 FMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQELE 494
>AT1G63650.3 | Symbols: EGL3 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:23599809-23602734
FORWARD LENGTH=596
Length = 596
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 45/54 (83%)
Query: 129 DHIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKVRALE 182
+H ++E+KRREKL+++F+ L +++P + K+DK S+L DTI+YL+ LQ++V+ LE
Sbjct: 405 NHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELE 458
>AT1G63650.2 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr1:23599809-23602734 FORWARD LENGTH=596
Length = 596
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 45/54 (83%)
Query: 129 DHIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKVRALE 182
+H ++E+KRREKL+++F+ L +++P + K+DK S+L DTI+YL+ LQ++V+ LE
Sbjct: 405 NHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELE 458
>AT1G63650.1 | Symbols: EGL3, EGL1, ATMYC-2 | basic helix-loop-helix
(bHLH) DNA-binding superfamily protein |
chr1:23599809-23602734 FORWARD LENGTH=596
Length = 596
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 45/54 (83%)
Query: 129 DHIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKVRALE 182
+H ++E+KRREKL+++F+ L +++P + K+DK S+L DTI+YL+ LQ++V+ LE
Sbjct: 405 NHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELE 458
>AT4G00870.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:362230-363639 REVERSE
LENGTH=423
Length = 423
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 41/55 (74%)
Query: 130 HIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKVRALEEE 184
H+ AE++RREKL+ +F AL A+VP + +MDKAS+L D + Y++ L+ K+ LE E
Sbjct: 250 HVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDDLETE 304
>AT5G46830.1 | Symbols: ATNIG1, NIG1 | NACL-inducible gene 1 |
chr5:19002719-19004254 FORWARD LENGTH=511
Length = 511
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 42/60 (70%)
Query: 126 QPQDHIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKVRALEEEQ 185
+P +H+ AER RREKL+ +F AL A+VP + KMDK S+L D + Y+ +L+ K +E E+
Sbjct: 340 KPLNHVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAENVELEK 399
>AT4G29930.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14645505 FORWARD
LENGTH=263
Length = 263
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 43/55 (78%)
Query: 130 HIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKVRALEEE 184
++++ER RR+KL+Q+ AL ++VP + K+DKASV+ D+I Y+++L ++ + LE E
Sbjct: 55 NVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAE 109
>AT4G29930.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14647449 FORWARD
LENGTH=254
Length = 254
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 43/55 (78%)
Query: 130 HIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKVRALEEE 184
++++ER RR+KL+Q+ AL ++VP + K+DKASV+ D+I Y+++L ++ + LE E
Sbjct: 55 NVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAE 109
>AT4G29930.4 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14644108-14645168 FORWARD
LENGTH=184
Length = 184
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 43/55 (78%)
Query: 130 HIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKVRALEEE 184
++++ER RR+KL+Q+ AL ++VP + K+DKASV+ D+I Y+++L ++ + LE E
Sbjct: 55 NVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAE 109
>AT5G65640.1 | Symbols: bHLH093 | beta HLH protein 93 |
chr5:26237137-26238904 FORWARD LENGTH=351
Length = 351
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 93/194 (47%), Gaps = 13/194 (6%)
Query: 88 NITTPLDMISQGNLEDQNYVFKT--CQEDHKKILTRPKLSQPQDHIIAERKRREKLSQQF 145
N P+ S DQ+ F C + K ++ QP +++AER+RR++L+ +
Sbjct: 135 NFNNPMSYPSPLMESDQSKSFSVGYCGGETNKKKSKKLEGQPSKNLMAERRRRKRLNDRL 194
Query: 146 IALSALVPGLQKMDKASVLGDTIKYLKQLQEKVRALEEEQ----NLKKNVQSVVIVKKSQ 201
L ++VP + KMD+ S+LGD I Y+K+L +K+ L++E+ N + S +
Sbjct: 195 SMLRSIVPKISKMDRTSILGDAIDYMKELLDKINKLQDEEQELGNSNNSHHSKLFGDLKD 254
Query: 202 LGSFD---KELPEIEARFCERNVLIRVHCEKSKGVVEKTIHEIEKLHLKVINSTALTFGS 258
L + + + P+ E + + + + C G++ T++ +E L L++ S
Sbjct: 255 LNANEPLVRNSPKFEIDRRDEDTRVDICCSPKPGLLLSTVNTLETLGLEIEQCVI----S 310
Query: 259 CALDITIIAQMDVG 272
C D ++ A G
Sbjct: 311 CFSDFSLQASCSEG 324
>AT2G28160.1 | Symbols: FIT1, ATBHLH029, FRU, BHLH029, ATBHLH29,
ATFIT1 | FER-like regulator of iron uptake |
chr2:12004713-12005908 FORWARD LENGTH=318
Length = 318
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 69/145 (47%), Gaps = 31/145 (21%)
Query: 131 IIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKVRALEEE-QNLKK 189
+I+ER+RR ++ + AL +LVP + KMDKAS++GD + Y+++LQ + + L+ + L+
Sbjct: 133 LISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLKSDIAGLEA 192
Query: 190 NVQSVVIVKKSQLGSFDKELPEIEA---------------------RFCERNVLIRVHCE 228
++ S G + + P+ + + E+ +R+ C
Sbjct: 193 SLNST--------GGYQEHAPDAQKTQPFRGINPPASKKIIQMDVIQVEEKGFYVRLVCN 244
Query: 229 KSKGVVEKTIHEIEKL-HLKVINST 252
K +GV +E L +V NS
Sbjct: 245 KGEGVAPSLYKSLESLTSFQVQNSN 269
>AT5G58010.1 | Symbols: LRL3 | LJRHL1-like 3 |
chr5:23483670-23484889 REVERSE LENGTH=297
Length = 297
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 55/103 (53%), Gaps = 10/103 (9%)
Query: 81 EMGCPTINITTPLDMISQGNLEDQNYVFKTCQED-HKKILTRPKLSQPQD-HIIAERKRR 138
E G PT M SQ L+ Q V T +K R + Q D H IAER RR
Sbjct: 67 ESGGPT--------MGSQEGLQPQGTVSTTSAPVVRQKPRVRARRGQATDPHSIAERLRR 118
Query: 139 EKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKVRAL 181
E+++++ +L LVP K DKAS+L + I+Y++ LQ +V+ L
Sbjct: 119 ERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQVKVL 161
>AT2G46810.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:19239694-19242373 FORWARD
LENGTH=371
Length = 371
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 95/179 (53%), Gaps = 19/179 (10%)
Query: 125 SQPQDHIIAERKRREKLSQQFIALSALVPG--LQKMDKASVLGDTIKYLKQLQEKVRALE 182
SQ HI ER RR +++ +L +++P +Q+ D+AS++G I ++K L++++++LE
Sbjct: 190 SQRMTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILEQQLQSLE 249
Query: 183 EEQNLKKNV---------QSVVIVKKSQLGSFDKELP----EIEARFCERNVLIRVHCEK 229
++ +++ S+ + ++L + +KE +IEA E +V +++ C +
Sbjct: 250 AQKRSQQSDDNKEQIPEDNSLRNISSNKLRASNKEEQSSKLKIEATVIESHVNLKIQCTR 309
Query: 230 SKGVVEKTIHEIEKLHLKV----INSTALTFGSCALDITIIAQMDVGFCMTVKDLVRKL 284
+G + ++I +EKL V I S T S + ++ + + ++G + +R++
Sbjct: 310 KQGQLLRSIILLEKLRFTVLHLNITSPTNTSVSYSFNLKMEDECNLGSADEITAAIRQI 368
>AT4G00050.1 | Symbols: UNE10 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:17863-19848
FORWARD LENGTH=399
Length = 399
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 35/49 (71%)
Query: 130 HIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKV 178
H +ERKRR+K++Q+ L LVP K DKAS+L + I+YLKQLQ +V
Sbjct: 218 HNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQV 266
>AT5G65640.2 | Symbols: bHLH093 | beta HLH protein 93 |
chr5:26237137-26238635 FORWARD LENGTH=290
Length = 290
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
Query: 88 NITTPLDMISQGNLEDQNYVFKT--CQEDHKKILTRPKLSQPQDHIIAERKRREKLSQQF 145
N P+ S DQ+ F C + K ++ QP +++AER+RR++L+ +
Sbjct: 135 NFNNPMSYPSPLMESDQSKSFSVGYCGGETNKKKSKKLEGQPSKNLMAERRRRKRLNDRL 194
Query: 146 IALSALVPGLQKMDKASVLGDTIKYLKQLQEKVRALEEEQ 185
L ++VP + KMD+ S+LGD I Y+K+L +K+ L++E+
Sbjct: 195 SMLRSIVPKISKMDRTSILGDAIDYMKELLDKINKLQDEE 234
>AT5G67110.1 | Symbols: ALC | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr5:26785332-26786338
REVERSE LENGTH=210
Length = 210
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 39/54 (72%)
Query: 128 QDHIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKVRAL 181
Q H ++E+KRR K++++ AL L+P K DKAS+L + I+YLKQLQ +V+ L
Sbjct: 96 QFHNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTL 149
>AT4G38070.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:17876535-17882569 FORWARD
LENGTH=1513
Length = 1513
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 39/60 (65%)
Query: 120 TRPKLSQPQDHIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKVR 179
T K + H AER+RR +++ QF L ++P L K DKASVLG+T++Y +L++ V+
Sbjct: 1343 TESKEVAAKKHSDAERRRRLRINSQFATLRTILPNLVKQDKASVLGETVRYFNELKKMVQ 1402
>AT2G40200.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:16791098-16792027 FORWARD
LENGTH=254
Length = 254
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 125 SQPQDHIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKVRALEEE 184
S + H +AE++RR++++ AL LVP K+DKA++L I+ +K+L++K
Sbjct: 62 SLSRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQKAAESPIF 121
Query: 185 QNLKKNVQSVVIVKKSQLGSFDKELPEI--EARFCERNVLIRVHCEKSKGVVEKTIHEIE 242
Q+L V V+ + F+ I +A FC CE + + I +
Sbjct: 122 QDLPTEADEVT-VQPETISDFESNTNTIIFKASFC---------CEDQPEAISEIIRVLT 171
Query: 243 KLHLKVINSTALTFG 257
KL L+ I + ++ G
Sbjct: 172 KLQLETIQAEIISVG 186
>AT3G21330.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr3:7507720-7508841 FORWARD
LENGTH=373
Length = 373
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 7/66 (10%)
Query: 117 KILTRPKLSQPQDHIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQE 176
KI T P+ +A R+RRE++S++ L LVPG KMD AS+L + YLK L+
Sbjct: 274 KISTDPQ-------TVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRA 326
Query: 177 KVRALE 182
+V+ALE
Sbjct: 327 QVKALE 332
>AT4G30980.1 | Symbols: LRL2 | LJRHL1-like 2 |
chr4:15079489-15081606 REVERSE LENGTH=310
Length = 310
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 6/107 (5%)
Query: 120 TRPKL----SQPQD-HIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQL 174
T+PK+ Q D H IAER RRE+++++ +L LVP K DKAS+L + I Y+K L
Sbjct: 126 TKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFL 185
Query: 175 QEKVRALEEEQNLKKNVQSVVIVKKSQLGSFDKELPEIEARFCERNV 221
Q +V+ L + L + + + GS + EA+ E V
Sbjct: 186 QLQVKVLSMSR-LGGAASASSQISEDAGGSHENTSSSGEAKMTEHQV 231
>AT2G31210.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr2:13296655-13298139 FORWARD
LENGTH=428
Length = 428
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 80/178 (44%), Gaps = 16/178 (8%)
Query: 7 TGLPDQEMMGDPTLLHQWHSDDSSLLPMAAAFGETLQHHSFTY-PNFNLITPMNQFQLGS 65
T P+ P LL H S M+ + + FTY P F+L P + S
Sbjct: 104 TSHPNTTTTPIPDLLSLLHLPRCS---MSLPSSDIMAGSCFTYDPLFHLNLPPQPPLIPS 160
Query: 66 NHMSQFQLGLQKLKDEMGCPTINITTPLDMISQGNLEDQNYVFKT-CQEDHKKILTRPKL 124
N S + LG+ N TT D + G+ E+ N F + E K+I + +
Sbjct: 161 NDYSGYLLGID----------TNTTTQRDESNVGD-ENNNAQFDSGIIEFSKEIRRKGRG 209
Query: 125 SQPQDHIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKVRALE 182
+ ER+RR L++++ AL L+P K D+AS+L D I Y+ +L+ +V L+
Sbjct: 210 KRKNKPFTTERERRCHLNERYEALKLLIPSPSKGDRASILQDGIDYINELRRRVSELK 267
>AT4G36930.1 | Symbols: SPT | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:17414167-17415945
FORWARD LENGTH=373
Length = 373
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 39/52 (75%)
Query: 130 HIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKVRAL 181
H ++E++RR +++++ AL +L+P K DKAS+L + I+YLKQLQ +V+ L
Sbjct: 202 HNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 253
>AT2G24260.1 | Symbols: LRL1 | LJRHL1-like 1 |
chr2:10319646-10322177 REVERSE LENGTH=350
Length = 350
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 121 RPKLSQPQD-HIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKVR 179
R + Q D H IAER RRE+++++ AL LVP K DKAS+L + I Y+K LQ +V+
Sbjct: 139 RARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVK 198
Query: 180 ALE 182
L
Sbjct: 199 VLS 201
>AT1G09530.2 | Symbols: PIF3, POC1, PAP3 | phytochrome interacting
factor 3 | chr1:3077216-3079367 FORWARD LENGTH=524
Length = 524
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 39/52 (75%)
Query: 130 HIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKVRAL 181
H ++ER+RR++++++ AL L+P K+DKAS+L + I+YLK LQ +V+ +
Sbjct: 348 HNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIM 399
>AT1G09530.1 | Symbols: PIF3, POC1, PAP3 | phytochrome interacting
factor 3 | chr1:3077216-3079367 FORWARD LENGTH=524
Length = 524
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 39/52 (75%)
Query: 130 HIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKVRAL 181
H ++ER+RR++++++ AL L+P K+DKAS+L + I+YLK LQ +V+ +
Sbjct: 348 HNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIM 399
>AT4G01460.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:621334-622697 FORWARD
LENGTH=315
Length = 315
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 33/170 (19%)
Query: 125 SQPQDHIIAERKRREKLSQQFIALSALVPG--LQKMDKASVLGDTIKYLKQLQEKVRALE 182
+Q HI ER RR ++++ +L +L+P LQ+ D+AS++G I ++K+L++ +++LE
Sbjct: 112 NQRMTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVGGAIDFIKELEQLLQSLE 171
Query: 183 EEQNLKKNVQSVVIVKK-------------------------SQLGSFDKELPEIEARFC 217
E+ ++ ++ G D E+EA
Sbjct: 172 AEKRKDGTDETPKTASCSSSSSLACTNSSISSVSTTSENGFTARFGGGDT--TEVEATVI 229
Query: 218 ERNVLIRVHCEKSKGVVEKTIHEIEKLHLKVINSTALTFGSCALDITIIA 267
+ +V ++V C++ K + K I IE+L L +++ T S + D I +
Sbjct: 230 QNHVSLKVRCKRGKRQILKAIVSIEELKLAILHLTI----SSSFDFVIYS 275
>AT3G24140.1 | Symbols: FMA | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr3:8715525-8717772
REVERSE LENGTH=414
Length = 414
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 96/206 (46%), Gaps = 46/206 (22%)
Query: 125 SQPQDHIIAERKRREKLSQQFIALSALVPG--LQKMDKASVLGDTIKYLKQLQEKVRALE 182
SQ HI ER RR+++++ L +L+PG +Q+ D+AS++G I+++++L++ ++ LE
Sbjct: 194 SQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLE 253
Query: 183 EEQNLK------------------------KNVQSVVI---VKKSQLGSFDKE------- 208
++ + Q ++I V + + G +E
Sbjct: 254 SQKRRRILGETGRDMTTTTTSSSSPITTVANQAQPLIITGNVTELEGGGGLREETAENKS 313
Query: 209 -LPEIEARFCERNVLIRVHCEKSKGVVEKTIHEIEKLHLKVINSTALTFGSCALDITIIA 267
L ++E + + +I++ + G + KTI +E LHL ++++ T ++ T++
Sbjct: 314 CLADVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDLHLSILHTNITT-----MEQTVLY 368
Query: 268 QMDVGFC----MTVKDLVRKLRSAFT 289
+V T +D+ ++ F+
Sbjct: 369 SFNVKITSETRFTAEDIASSIQQIFS 394
>AT1G10610.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:3506463-3508752 FORWARD
LENGTH=441
Length = 441
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 88/192 (45%), Gaps = 29/192 (15%)
Query: 115 HKKILTRPKLSQPQDHIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQL 174
+KK+L H +ERKRRE+++Q L A+VP + K++K + D + Y+ +L
Sbjct: 252 NKKLLPTENFKSKNLH--SERKRRERINQAMYGLRAVVPKITKLNKIGIFSDAVDYINEL 309
Query: 175 QEKVRALEEEQNLKKNVQSVVIVKKSQLGSFDKELPEIEAR----------------FCE 218
+ + LE+E ++ I + Q D E + ++ E
Sbjct: 310 LVEKQKLEDELKGINEMECKEIAAEEQSAIADPEAERVSSKSNKRVKKNEVKIEVHETGE 369
Query: 219 RNVLIRVHCEKSKGVVEKTIHEIEKLHLKVINSTALTFGSCALDITIIAQMDVG------ 272
R+ LIRV E + ++ I ++ L++I+ + F LD+T++ ++V
Sbjct: 370 RDFLIRVVQEHKQDGFKRLIEAVDLCELEIID---VNFTR--LDLTVMTVLNVKANKDGI 424
Query: 273 FCMTVKDLVRKL 284
C ++DL+ K+
Sbjct: 425 ACGILRDLLLKM 436
>AT2G20180.3 | Symbols: PIL5 | phytochrome interacting factor 3-like
5 | chr2:8704276-8706538 REVERSE LENGTH=478
Length = 478
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 38/52 (73%)
Query: 130 HIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKVRAL 181
H ++ERKRR++++++ AL L+P K DKAS+L + I+Y+K LQ +++ +
Sbjct: 289 HNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMM 340
>AT2G20180.2 | Symbols: PIL5 | phytochrome interacting factor 3-like
5 | chr2:8704525-8706538 REVERSE LENGTH=478
Length = 478
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 38/52 (73%)
Query: 130 HIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKVRAL 181
H ++ERKRR++++++ AL L+P K DKAS+L + I+Y+K LQ +++ +
Sbjct: 289 HNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMM 340
>AT3G06120.1 | Symbols: MUTE | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr3:1846531-1848016
FORWARD LENGTH=202
Length = 202
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 32/154 (20%)
Query: 129 DHIIAERKRREKLSQQFIALSALVPG--LQKMDKASVLGDTIKYLKQLQEKVRALEEEQN 186
HI ER RR ++++ +L +L P +++ D+AS++G I+++K+LQ+ V+ LE ++
Sbjct: 2 SHIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKKR 61
Query: 187 LKK-NVQSVVI----VKKSQLGSFDKELP-------------------------EIEARF 216
K N S ++ S LG+ +P +EA+
Sbjct: 62 RKTLNRPSFPYDHQTIEPSSLGAATTRVPFSRIENVMTTSTFKEVGACCNSPHANVEAKI 121
Query: 217 CERNVLIRVHCEKSKGVVEKTIHEIEKLHLKVIN 250
NV++RV + G + K I +EKL +V++
Sbjct: 122 SGSNVVLRVVSRRIVGQLVKIISVLEKLSFQVLH 155
>AT2G20180.1 | Symbols: PIL5, PIF1 | phytochrome interacting factor
3-like 5 | chr2:8704525-8706237 REVERSE LENGTH=407
Length = 407
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 34/46 (73%)
Query: 130 HIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQ 175
H ++ERKRR++++++ AL L+P K DKAS+L + I+Y+K LQ
Sbjct: 218 HNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQ 263
>AT4G00120.1 | Symbols: IND1, GT140, IND, EDA33 | basic
helix-loop-helix (bHLH) DNA-binding superfamily protein
| chr4:42601-43197 REVERSE LENGTH=198
Length = 198
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 132 IAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKVRALE 182
+ R+RRE++S++ L +VPG KMD AS+L + I+Y K L+ +VR L+
Sbjct: 125 VVARRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQ 175
>AT4G28800.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr4:14221970-14224075 FORWARD
LENGTH=445
Length = 445
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 130 HIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKVRAL 181
H +AER+RREK++++ L L+P K K S L D I+Y+K LQ +++ +
Sbjct: 260 HNLAERRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEYVKSLQSQIQGM 311
>AT5G46690.1 | Symbols: bHLH071 | beta HLH protein 71 |
chr5:18945639-18947434 FORWARD LENGTH=327
Length = 327
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 130 HIIAERKRREKLSQQFIALSALVPG--LQKMDKASVLGDTIKYLKQLQEKVRALEEEQNL 187
HI ER RR +++Q L +L+P K D+AS++G I ++K+L+ K+ +LE +++
Sbjct: 90 HIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKELEHKLLSLEAQKHH 149
Query: 188 KKNVQSVVIVKKSQLGSFDKELP 210
+ V SQ + ++E P
Sbjct: 150 NAKLNQSVTSSTSQDSNGEQENP 172
>AT5G56960.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
family protein | chr5:23038703-23041174 REVERSE
LENGTH=466
Length = 466
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 122 PKLSQPQDHIIAERKRREKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKVRAL 181
P +Q Q H+I+ERKRREKL++ F AL +L+P K DKASVL + L LQ ++ L
Sbjct: 283 PSATQLQ-HMISERKRREKLNESFQALRSLLPPGTKKDKASVLSIAREQLSSLQGEISKL 341
Query: 182 EE 183
E
Sbjct: 342 LE 343
>AT5G62610.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr5:25133117-25134600 REVERSE
LENGTH=281
Length = 281
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 118 ILTRPKLSQPQD-HIIAERKRREKLSQQFIALSALVPGLQK-MDKASVLGDTIKYLKQLQ 175
I R + Q D H +AER RREK+S++ AL ++PG K + KA VL + I Y++ LQ
Sbjct: 151 IHVRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQ 210
Query: 176 EKVRAL 181
+V L
Sbjct: 211 RQVEFL 216
>AT4G00480.1 | Symbols: ATMYC1, myc1 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr4:217106-219684
REVERSE LENGTH=526
Length = 526
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 79/176 (44%), Gaps = 30/176 (17%)
Query: 138 REKLSQQFIALSALVPGLQKMDKASVLGDTIKYLKQLQEKVRAL----------EEEQNL 187
R K +++F L +VP + ++DK S+L +TIKYL++L+ +V L E ++
Sbjct: 346 RRKENEKFSVLRTMVPTVNEVDKESILNNTIKYLQELEARVEELESCMGSVNFVERQRKT 405
Query: 188 KKNVQSVVIVKKSQLGSFD------------------KELPEIEARFCERNVLIRVHCEK 229
+N+ V+++++ G++D ++ + + E V+I V C
Sbjct: 406 TENLNDSVLIEETS-GNYDDSTKIDDNSGETEQVTVFRDKTHLRVKLKETEVVIEVRCSY 464
Query: 230 SKGVVEKTIHEIEKLHLKVINSTALTFGSCALDITIIAQMDVGFCMTVKDLVRKLR 285
+V + + LH+ + + T L + + A+ +V + R+LR
Sbjct: 465 RDYIVADIMETLSNLHMDAFSVRSHTLNKF-LTLNLKAKFRGAAVASVGMIKRELR 519